Lonchura striata domestica isolate Mets1 chromosome 17, lonStrDom2, whole genome shotgun sequence.
type: Entry
definition: Lonchura striata domestica isolate Mets1 chromosome 17, lonStrDom2, whole genome shotgun sequence.
sequence version: NC_042582.1
sequence date: 2019-11-05
sequence: sequence
division: CON
label: NC_042582.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA391487
dblink: SAMN11521339
keyword: WGS
keyword: RefSeq
source: Lonchura striata domestica (Bengalese finch)
organism: Lonchura striata domestica
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM016778.1.\nAssembly name: lonStrDom2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the HHMI/UCSF on 2019/06/05. The\noriginal whole-genome shotgun project has the accession\nSWKX00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: HHMI/UCSF\nAssembly Date :: 30-NOV-2018\nAssembly Method :: AllPaths v. JAN-2015; HiRise v.\n NOV-2018\nAssembly Name :: lonStrDom2\nGenome Representation :: Full\nExpected Final Version :: Yes\nReference-guided Assembly :: GCA_002197715.1\nGenome Coverage :: 151.0x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Lonchura striata domestica\n Annotation Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 11552688
topology: linear
so has quality: SO_0000987
location: 1..11552688
location: region:1-11552688:1
RO_0002162: 299123

NC_042582
type: RefSeq
SIO_000068: refseq

PRJNA391487
type: BioProject
SIO_000068: bioproject

SAMN11521339
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11552688:1
position: 11552688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-11552688:1:source
so part of: sequence
organism: Lonchura striata domestica
mol type: genomic DNA
isolate: Mets1
sub species: domestica
chromosome: 17
sex: male
tissue type: blood
dev stage: adult

299123
type: Taxonomy
SIO_000068: taxonomy

LOC110481932
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110481932
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4073..7786
location: region:4073-7786:1
so has part: feature:4073-7786:1:exon
subclass of: SO_0000010

110481932
type: Gene
SIO_000068: ncbigene

position:4073:1
position: 4073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7786:1
position: 7786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4073-7786:1:exon

LOC110481932
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110481932
product: voltage-dependent N-type calcium channel subunit alpha-1B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021550801.2
SIO_010081: LOC110481932
subclass of: SO_0000673
so part of: LOC110481932
location: join(4073..4355,4510..4721,6388..6931,7130..7786)
location: region:4073-7786:1
so has part: feature:4073-4355:1:exon
so has part: feature:4510-4721:1:exon
so has part: feature:6388-6931:1:exon
so has part: feature:7130-7786:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4073-4355:1:exon

position:4355:1
position: 4355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4510-4721:1:exon

position:4510:1
position: 4510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4721:1
position: 4721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6388-6931:1:exon

position:6388:1
position: 6388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6931:1
position: 6931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7130-7786:1:exon

position:7130:1
position: 7130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110481932
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110481932
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent N-type calcium channel subunit alpha-1B-like
translation: MLGARPPSGARPSLTVLRVPACSPQPIPDTSPMKRSVSTLAPQRPHAMHLYEYSLERMPPEQGHHHHHHRCHRRKEKKQKSVDRAAHHLADGQAVAQSGESSSKDKKQERGRSQERKQHSSSSSEKQRFYSCDRYGSRDRAQPKSADQSRPTSPNGGPEHGPHRQGSGSVNGSPLLSTSGASTPCRGRRQLPQTPLTPRPSITYKTANSSPVHFTTFQTPTFSPGRLSRGLSEHNALLRGEQQPPPPAVARIGSDPYLGHRAAASPQRAAPEDTLTFEEAVATNSGRSSRTSYVSSLTSQSHQIRRVPNGYHYTLGLNTGPGARGRSYYHEADEDDWC
SIO_010081: LOC110481932
subclass of: SO_0000673
so part of: LOC110481932
location: join(4073..4355,4510..4721,6388..6909)
location: region:4073-6909:1
so has part: feature:4073-4355:1:exon
so has part: feature:4510-4721:1:exon
so has part: feature:6388-6909:1:exon

XP_021406476.1
type: Protein
SIO_000068: ncbiprotein

position:6909:1
position: 6909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4073-4355:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4510-4721:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6388-6909:1:exon

LOC116184237
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116184237
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 58984..74319
location: region:58984-74319:1
so has part: feature:58984-74319:1:exon
subclass of: SO_0000010

116184237
type: Gene
SIO_000068: ncbigene

position:58984:1
position: 58984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74319:1
position: 74319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58984-74319:1:exon

LOC116184237
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC116184237
product: collagen alpha-2(XI) chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 65% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031506340.1
SIO_010081: LOC116184237
subclass of: SO_0000673
so part of: LOC116184237
location: join(58984..58991,59084..59279,59917..60054,61582..61623,69456..69705,69779..69976,74279..74319)
location: region:58984-74319:1
so has part: feature:58984-58991:1:exon
so has part: feature:59084-59279:1:exon
so has part: feature:59917-60054:1:exon
so has part: feature:61582-61623:1:exon
so has part: feature:69456-69705:1:exon
so has part: feature:69779-69976:1:exon
so has part: feature:74279-74319:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:58984-58991:1:exon

position:58991:1
position: 58991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:59084-59279:1:exon

position:59084:1
position: 59084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59279:1
position: 59279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:59917-60054:1:exon

position:59917:1
position: 59917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60054:1
position: 60054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:61582-61623:1:exon

position:61582:1
position: 61582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61623:1
position: 61623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:69456-69705:1:exon

position:69456:1
position: 69456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69705:1
position: 69705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:69779-69976:1:exon

position:69779:1
position: 69779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69976:1
position: 69976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:74279-74319:1:exon

position:74279:1
position: 74279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116184237
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC116184237
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-2(XI) chain-like
translation: MDTFPVSFLGDGHWHQVALSISLERLELHVDCRLVDRVSWSNYFGMGVNTEGLIIIGGLIESFEIPFKGALQQLTFVMGDPGAAAEQCHSYNSTCPGSSSLHRAPWELPTAWPEVPKETNEIQDSSTQDSRLTSSDSAPGSPWPWEDAQGTLSLQPDGSALASLSAHELPSAEEEEEEEGSLSIEDEGFELLNSTYNKITGPGRPALRRSSASIKPPRAARKERGSDPREENVTTEKLSGDAGARWRLPPGKPHLDPVPKVSPPAHRGAAPKGNVPKGIPGGHGEDGPPR
SIO_010081: LOC116184237
subclass of: SO_0000673
so part of: LOC116184237
location: join(58984..58991,59084..59279,59917..60054,61582..61623,69456..69705,69779..69976,74279..74319)
location: region:58984-74319:1
so has part: feature:58984-58991:1:exon
so has part: feature:59084-59279:1:exon
so has part: feature:59917-60054:1:exon
so has part: feature:61582-61623:1:exon
so has part: feature:69456-69705:1:exon
so has part: feature:69779-69976:1:exon
so has part: feature:74279-74319:1:exon

XP_031362200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58984-58991:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:59084-59279:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59917-60054:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:61582-61623:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:69456-69705:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:69779-69976:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:74279-74319:1:exon

LOC110481934
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110481934
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 83548..84450
location: region:83548-84450:1
so has part: feature:83548-84450:1:exon
subclass of: SO_0000011

110481934
type: Gene
SIO_000068: ncbigene

position:83548:1
position: 83548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84450:1
position: 84450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83548-84450:1:exon

LOC110481934
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110481934
product: uncharacterized LOC110481934
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_002467347.2
SIO_010081: LOC110481934
subclass of: SO_0000673
so part of: LOC110481934
location: join(83548..83577,84226..84279,84408..84450)
location: region:83548-84450:1
so has part: feature:83548-83577:1:exon
so has part: feature:84226-84279:1:exon
so has part: feature:84408-84450:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:83548-83577:1:exon

position:83577:1
position: 83577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:84226-84279:1:exon

position:84226:1
position: 84226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84279:1
position: 84279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:84408-84450:1:exon

position:84408:1
position: 84408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110481933
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110481933
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 84675..85737
location: region:84675-85737:1
so has part: feature:84675-85737:1:exon
subclass of: SO_0000011

110481933
type: Gene
SIO_000068: ncbigene

position:84675:1
position: 84675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85737:1
position: 85737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84675-85737:1:exon

LOC110481933
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110481933
product: uncharacterized LOC110481933
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_002467346.1
SIO_010081: LOC110481933
subclass of: SO_0000673
so part of: LOC110481933
location: join(84675..84730,85259..85303,85567..85620,85709..85737)
location: region:84675-85737:1
so has part: feature:84675-84730:1:exon
so has part: feature:85259-85303:1:exon
so has part: feature:85567-85620:1:exon
so has part: feature:85709-85737:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:84675-84730:1:exon

position:84730:1
position: 84730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:85259-85303:1:exon

position:85259:1
position: 85259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85303:1
position: 85303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:85567-85620:1:exon

position:85567:1
position: 85567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85620:1
position: 85620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:85709-85737:1:exon

position:85709:1
position: 85709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COL27A1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: COL27A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 90412..113125
location: region:90412-113125:1
so has part: feature:90412-113125:1:exon
subclass of: SO_0000010

110481931
type: Gene
SIO_000068: ncbigene

position:90412:1
position: 90412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113125:1
position: 113125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90412-113125:1:exon

COL27A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: COL27A1
product: collagen type XXVII alpha 1 chain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031506341.1
SIO_010081: COL27A1
subclass of: SO_0000673
so part of: COL27A1
location: join(90412..90465,90654..90707,90900..90944,91468..91513,92609..92653,93226..93279,94112..94165,94362..94415,94598..94651,94939..94992,95184..95228,95492..95536,96507..96614,97493..97546,97747..97800,97958..98011,98222..98329,98695..98748,98992..99099,99389..99442,99950..100003,100260..100313,100716..100769,101719..101826,101944..101997,102134..102187,102453..102506,102881..102934,103117..103170,103397..103450,104105..104158,104948..105001,105078..105131,105283..105336,105445..105462,105621..105674,105862..105924,106150..106315,106554..106642,107258..107365,108192..108245,108446..108499,108657..108710,108921..109028,109368..109421,109665..109772,110062..110115,110623..110676,110933..110986,111389..111442,112392..112499,112617..112670,112807..112860,113057..113125)
location: region:90412-113125:1
so has part: feature:90412-90465:1:exon
so has part: feature:90654-90707:1:exon
so has part: feature:90900-90944:1:exon
so has part: feature:91468-91513:1:exon
so has part: feature:92609-92653:1:exon
so has part: feature:93226-93279:1:exon
so has part: feature:94112-94165:1:exon
so has part: feature:94362-94415:1:exon
so has part: feature:94598-94651:1:exon
so has part: feature:94939-94992:1:exon
so has part: feature:95184-95228:1:exon
so has part: feature:95492-95536:1:exon
so has part: feature:96507-96614:1:exon
so has part: feature:97493-97546:1:exon
so has part: feature:97747-97800:1:exon
so has part: feature:97958-98011:1:exon
so has part: feature:98222-98329:1:exon
so has part: feature:98695-98748:1:exon
so has part: feature:98992-99099:1:exon
so has part: feature:99389-99442:1:exon
so has part: feature:99950-100003:1:exon
so has part: feature:100260-100313:1:exon
so has part: feature:100716-100769:1:exon
so has part: feature:101719-101826:1:exon
so has part: feature:101944-101997:1:exon
so has part: feature:102134-102187:1:exon
so has part: feature:102453-102506:1:exon
so has part: feature:102881-102934:1:exon
so has part: feature:103117-103170:1:exon
so has part: feature:103397-103450:1:exon
so has part: feature:104105-104158:1:exon
so has part: feature:104948-105001:1:exon
so has part: feature:105078-105131:1:exon
so has part: feature:105283-105336:1:exon
so has part: feature:105445-105462:1:exon
so has part: feature:105621-105674:1:exon
so has part: feature:105862-105924:1:exon
so has part: feature:106150-106315:1:exon
so has part: feature:106554-106642:1:exon
so has part: feature:107258-107365:1:exon
so has part: feature:108192-108245:1:exon
so has part: feature:108446-108499:1:exon
so has part: feature:108657-108710:1:exon
so has part: feature:108921-109028:1:exon
so has part: feature:109368-109421:1:exon
so has part: feature:109665-109772:1:exon
so has part: feature:110062-110115:1:exon
so has part: feature:110623-110676:1:exon
so has part: feature:110933-110986:1:exon
so has part: feature:111389-111442:1:exon
so has part: feature:112392-112499:1:exon
so has part: feature:112617-112670:1:exon
so has part: feature:112807-112860:1:exon
so has part: feature:113057-113125:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90412-90465:1:exon

position:90465:1
position: 90465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:90654-90707:1:exon

position:90654:1
position: 90654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90707:1
position: 90707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:90900-90944:1:exon

position:90900:1
position: 90900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90944:1
position: 90944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:91468-91513:1:exon

position:91468:1
position: 91468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91513:1
position: 91513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:92609-92653:1:exon

position:92609:1
position: 92609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92653:1
position: 92653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:93226-93279:1:exon

position:93226:1
position: 93226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93279:1
position: 93279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:94112-94165:1:exon

position:94112:1
position: 94112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94165:1
position: 94165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:94362-94415:1:exon

position:94362:1
position: 94362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94415:1
position: 94415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:94598-94651:1:exon

position:94598:1
position: 94598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94651:1
position: 94651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:94939-94992:1:exon

position:94939:1
position: 94939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94992:1
position: 94992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:95184-95228:1:exon

position:95184:1
position: 95184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95228:1
position: 95228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:95492-95536:1:exon

position:95492:1
position: 95492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95536:1
position: 95536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:96507-96614:1:exon

position:96507:1
position: 96507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96614:1
position: 96614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:97493-97546:1:exon

position:97493:1
position: 97493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97546:1
position: 97546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:97747-97800:1:exon

position:97747:1
position: 97747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97800:1
position: 97800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:97958-98011:1:exon

position:97958:1
position: 97958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98011:1
position: 98011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:98222-98329:1:exon

position:98222:1
position: 98222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98329:1
position: 98329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:98695-98748:1:exon

position:98695:1
position: 98695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98748:1
position: 98748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:98992-99099:1:exon

position:98992:1
position: 98992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99099:1
position: 99099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:99389-99442:1:exon

position:99389:1
position: 99389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99442:1
position: 99442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:99950-100003:1:exon

position:99950:1
position: 99950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100003:1
position: 100003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:100260-100313:1:exon

position:100260:1
position: 100260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100313:1
position: 100313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:100716-100769:1:exon

position:100716:1
position: 100716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100769:1
position: 100769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:101719-101826:1:exon

position:101719:1
position: 101719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101826:1
position: 101826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:101944-101997:1:exon

position:101944:1
position: 101944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101997:1
position: 101997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:102134-102187:1:exon

position:102134:1
position: 102134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102187:1
position: 102187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:102453-102506:1:exon

position:102453:1
position: 102453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102506:1
position: 102506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:102881-102934:1:exon

position:102881:1
position: 102881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102934:1
position: 102934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:103117-103170:1:exon

position:103117:1
position: 103117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103170:1
position: 103170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:103397-103450:1:exon

position:103397:1
position: 103397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103450:1
position: 103450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:104105-104158:1:exon

position:104105:1
position: 104105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104158:1
position: 104158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:104948-105001:1:exon

position:104948:1
position: 104948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105001:1
position: 105001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:105078-105131:1:exon

position:105078:1
position: 105078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105131:1
position: 105131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:105283-105336:1:exon

position:105283:1
position: 105283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105336:1
position: 105336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:105445-105462:1:exon

position:105445:1
position: 105445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105462:1
position: 105462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:105621-105674:1:exon

position:105621:1
position: 105621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105674:1
position: 105674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:105862-105924:1:exon

position:105862:1
position: 105862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105924:1
position: 105924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:106150-106315:1:exon

position:106150:1
position: 106150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106315:1
position: 106315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:106554-106642:1:exon

position:106554:1
position: 106554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106642:1
position: 106642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:107258-107365:1:exon

position:107258:1
position: 107258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107365:1
position: 107365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:108192-108245:1:exon

position:108192:1
position: 108192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108245:1
position: 108245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:108446-108499:1:exon

position:108446:1
position: 108446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108499:1
position: 108499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:108657-108710:1:exon

position:108657:1
position: 108657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108710:1
position: 108710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:108921-109028:1:exon

position:108921:1
position: 108921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109028:1
position: 109028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:109368-109421:1:exon

position:109368:1
position: 109368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109421:1
position: 109421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:109665-109772:1:exon

position:109665:1
position: 109665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109772:1
position: 109772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:110062-110115:1:exon

position:110062:1
position: 110062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110115:1
position: 110115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:110623-110676:1:exon

position:110623:1
position: 110623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110676:1
position: 110676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:110933-110986:1:exon

position:110933:1
position: 110933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110986:1
position: 110986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:111389-111442:1:exon

position:111389:1
position: 111389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111442:1
position: 111442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:112392-112499:1:exon

position:112392:1
position: 112392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112499:1
position: 112499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:112617-112670:1:exon

position:112617:1
position: 112617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112670:1
position: 112670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 53
SIO_000628: feature:112807-112860:1:exon

position:112807:1
position: 112807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112860:1
position: 112860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 54
SIO_000628: feature:113057-113125:1:exon

position:113057:1
position: 113057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COL27A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: COL27A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXVII) chain
translation: MAPREPQDRGEPGAVWGSVGWLESLGCLARGACRERRAQKESLGHAGIVGSPGRRGPLGFAGLPGGRGHAGTPGSIGSPGKPGPDGEPGCLGPKGLPGKPGLEGPQGPVGTYGYPGPAGDRGRLGRRGDKGERGAQGPPGFPGKAGPKALPGPPGPRGAPGSQGRTGDPGPRGLPGLPGVPGTRGLAGIPGKPGMGGERGAPGAAGAAGPPGYPGREGPKGREGPAGMRGEKGEVGHPGAAGVRGLDGEQGPPGPAGAEGQLGPKGEQGEAGTCGAPGIRGSPGEPGDEGTEGPPGRPGKQGKEGDTGDTGDPGEPGPWGQKGNAGPRGIPGIPGPGAATGEIGGKGQKGEKGREGLLGQGGVTGAAGPAGARGWLGPPGLRGPPGLDGPEGEKGDAGPRGVDGPAGAAGFQGQAGDDGVKGDDGKAGPVGSQGAQGLAGAPGLRGYSGHEGARGVVGTKGQPGRQGILGPPGEAGATGLSGTEGLVGAKGEPGEPGKPGQMGSPGQAGPKGRKGCKGDKGDTGQEGDRGVPGEAGRRGKRGKPGQQPPRGPGGHKGYPGDKGLPGPQGPQGPYGIPGLKGIKGEPGPKGHKGEKGSRGDLGQQGDDGFKGKPGPHGVPGRPGPKGKQGDTGPPGPQGHPGIPGTPGSSGPKGLRGFPGLPGPRGTPGLPGLAGPPGPSGPALMLSQEELQHLIYSSNHLNYTVVWALLDSLSRELQALVEHPNGTKSNPATTCKELLLAHPGLPDGQYYIDPNQGSPQDALRAFCNFTAGGETCIGVPGTRGLAGIPGKPGMGGERGAPGAAGAAGPPGYPGREGPKGREGPAGMRGEKGEVGHPGAAGVRGLDGEQGPPGPAGAEGQLGPKGEQGEAGTCGAPGIRGSPGEPGDEGTEGPPGRPGKQGKEGDTGDTGDPGEPGPWGQKGNAGPRGIPGIPGPGAATGEIGGKGQKGEKGREGLLGQGGVTGAAGPAGARGWLGPPGLRGPPGLDGPEGEKGDAGPRGVDGPAGAAGFQGQAGDDGVKGDDGKAGPVGSQGAQGLAGAPGLRGYSGHEGARGVVGTKGQPGRQGILGPPGEAGATGLSGTEGLVGAKGEPGEPGKPGQMGSQEGHPWHSALTVGFPSPLGF
SIO_010081: COL27A1
subclass of: SO_0000673
so part of: COL27A1
location: join(90670..90707,90900..90944,91468..91513,92609..92653,93226..93279,94112..94165,94362..94415,94598..94651,94939..94992,95184..95228,95492..95536,96507..96614,97493..97546,97747..97800,97958..98011,98222..98329,98695..98748,98992..99099,99389..99442,99950..100003,100260..100313,100716..100769,101719..101826,101944..101997,102134..102187,102453..102506,102881..102934,103117..103170,103397..103450,104105..104158,104948..105001,105078..105131,105283..105336,105445..105462,105621..105674,105862..105924,106150..106315,106554..106642,107258..107365,108192..108245,108446..108499,108657..108710,108921..109028,109368..109421,109665..109772,110062..110115,110623..110676,110933..110986,111389..111442,112392..112499,112617..112670,112807..112860,113057..113125)
location: region:90670-113125:1
so has part: feature:90670-90707:1:exon
so has part: feature:90900-90944:1:exon
so has part: feature:91468-91513:1:exon
so has part: feature:92609-92653:1:exon
so has part: feature:93226-93279:1:exon
so has part: feature:94112-94165:1:exon
so has part: feature:94362-94415:1:exon
so has part: feature:94598-94651:1:exon
so has part: feature:94939-94992:1:exon
so has part: feature:95184-95228:1:exon
so has part: feature:95492-95536:1:exon
so has part: feature:96507-96614:1:exon
so has part: feature:97493-97546:1:exon
so has part: feature:97747-97800:1:exon
so has part: feature:97958-98011:1:exon
so has part: feature:98222-98329:1:exon
so has part: feature:98695-98748:1:exon
so has part: feature:98992-99099:1:exon
so has part: feature:99389-99442:1:exon
so has part: feature:99950-100003:1:exon
so has part: feature:100260-100313:1:exon
so has part: feature:100716-100769:1:exon
so has part: feature:101719-101826:1:exon
so has part: feature:101944-101997:1:exon
so has part: feature:102134-102187:1:exon
so has part: feature:102453-102506:1:exon
so has part: feature:102881-102934:1:exon
so has part: feature:103117-103170:1:exon
so has part: feature:103397-103450:1:exon
so has part: feature:104105-104158:1:exon
so has part: feature:104948-105001:1:exon
so has part: feature:105078-105131:1:exon
so has part: feature:105283-105336:1:exon
so has part: feature:105445-105462:1:exon
so has part: feature:105621-105674:1:exon
so has part: feature:105862-105924:1:exon
so has part: feature:106150-106315:1:exon
so has part: feature:106554-106642:1:exon
so has part: feature:107258-107365:1:exon
so has part: feature:108192-108245:1:exon
so has part: feature:108446-108499:1:exon
so has part: feature:108657-108710:1:exon
so has part: feature:108921-109028:1:exon
so has part: feature:109368-109421:1:exon
so has part: feature:109665-109772:1:exon
so has part: feature:110062-110115:1:exon
so has part: feature:110623-110676:1:exon
so has part: feature:110933-110986:1:exon
so has part: feature:111389-111442:1:exon
so has part: feature:112392-112499:1:exon
so has part: feature:112617-112670:1:exon
so has part: feature:112807-112860:1:exon
so has part: feature:113057-113125:1:exon

XP_031362201.1
type: Protein
SIO_000068: ncbiprotein

position:90670:1
position: 90670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90670-90707:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90900-90944:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91468-91513:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:92609-92653:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:93226-93279:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94112-94165:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:94362-94415:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:94598-94651:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:94939-94992:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:95184-95228:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:95492-95536:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:96507-96614:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:97493-97546:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:97747-97800:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:97958-98011:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:98222-98329:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:98695-98748:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:98992-99099:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:99389-99442:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:99950-100003:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:100260-100313:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:100716-100769:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:101719-101826:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:101944-101997:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:102134-102187:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:102453-102506:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:102881-102934:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:103117-103170:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:103397-103450:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:104105-104158:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:104948-105001:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:105078-105131:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:105283-105336:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:105445-105462:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:105621-105674:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:105862-105924:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:106150-106315:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:106554-106642:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:107258-107365:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:108192-108245:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:108446-108499:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:108657-108710:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:108921-109028:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:109368-109421:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:109665-109772:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:110062-110115:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:110623-110676:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:110933-110986:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:111389-111442:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:112392-112499:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:112617-112670:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:112807-112860:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:113057-113125:1:exon

LOC110480259
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110480259
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 114808..119368
location: region:114808-119368:1
so has part: feature:114808-119368:1:exon
subclass of: SO_0000010

110480259
type: Gene
SIO_000068: ncbigene

position:114808:1
position: 114808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119368:1
position: 119368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114808-119368:1:exon

LOC110480259
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110480259
product: collagen alpha-1(II) chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021548089.1
SIO_010081: LOC110480259
subclass of: SO_0000673
so part of: LOC110480259
location: join(114808..114831,115621..115674,115751..115804,115956..116009,116119..116136,116295..116348,116536..116598,116824..116989,117228..117334,117613..117693,117910..118098,118411..119368)
location: region:114808-119368:1
so has part: feature:114808-114831:1:exon
so has part: feature:115621-115674:1:exon
so has part: feature:115751-115804:1:exon
so has part: feature:115956-116009:1:exon
so has part: feature:116119-116136:1:exon
so has part: feature:116295-116348:1:exon
so has part: feature:116536-116598:1:exon
so has part: feature:116824-116989:1:exon
so has part: feature:117228-117334:1:exon
so has part: feature:117613-117693:1:exon
so has part: feature:117910-118098:1:exon
so has part: feature:118411-119368:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:114808-114831:1:exon

position:114831:1
position: 114831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:115621-115674:1:exon

position:115621:1
position: 115621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115674:1
position: 115674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:115751-115804:1:exon

position:115751:1
position: 115751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115804:1
position: 115804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:115956-116009:1:exon

position:115956:1
position: 115956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116009:1
position: 116009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:116119-116136:1:exon

position:116119:1
position: 116119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116136:1
position: 116136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:116295-116348:1:exon

position:116295:1
position: 116295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116348:1
position: 116348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:116536-116598:1:exon

position:116536:1
position: 116536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116598:1
position: 116598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:116824-116989:1:exon

position:116824:1
position: 116824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116989:1
position: 116989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:117228-117334:1:exon

position:117228:1
position: 117228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117334:1
position: 117334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:117613-117693:1:exon

position:117613:1
position: 117613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117693:1
position: 117693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:117910-118098:1:exon

position:117910:1
position: 117910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118098:1
position: 118098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:118411-119368:1:exon

position:118411:1
position: 118411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110480259
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110480259
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(II) chain-like
translation: MLSQEELQHLIYSSNHLNYTVVWALLDSLSRELQALVEHPNGTKSNPATTCKELLLAHPGLPDGQYYIDPNQGSPQDALRAFCNFTAGGETCIAPVHNQVPIKAWLSAYSSENTFEWFSTLPGGFLLEYAGASPVQLRFLRLHSHRATQKVSYSCGAAPERGRPQPRREIRFLADSRDHSYAASLQGCLLNNESSISDTIFQFSTEQLWLLPLRDLAVFHNGDASHQFGFTVGPVCFS
SIO_010081: LOC110480259
subclass of: SO_0000673
so part of: LOC110480259
location: join(116575..116598,116824..116989,117228..117334,117613..117693,117910..118098,118411..118560)
location: region:116575-118560:1
so has part: feature:116575-116598:1:exon
so has part: feature:116824-116989:1:exon
so has part: feature:117228-117334:1:exon
so has part: feature:117613-117693:1:exon
so has part: feature:117910-118098:1:exon
so has part: feature:118411-118560:1:exon

XP_021403764.1
type: Protein
SIO_000068: ncbiprotein

position:116575:1
position: 116575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118560:1
position: 118560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116575-116598:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:116824-116989:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:117228-117334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:117613-117693:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:117910-118098:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118411-118560:1:exon

LOC110480265
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110480265
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 119247..121368
location: region:119247-121368:1
so has part: feature:119247-121368:1:exon
subclass of: SO_0000010

110480265
type: Gene
SIO_000068: ncbigene

position:119247:1
position: 119247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121368:1
position: 121368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119247-121368:1:exon

LOC110480265
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110480265
product: collagen EMF1-alpha-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021548094.1
SIO_010081: LOC110480265
subclass of: SO_0000673
so part of: LOC110480265
location: join(119247..119255,119613..119693,119910..120098,120411..121368)
location: region:119247-121368:1
so has part: feature:119247-119255:1:exon
so has part: feature:119613-119693:1:exon
so has part: feature:119910-120098:1:exon
so has part: feature:120411-121368:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:119247-119255:1:exon

position:119255:1
position: 119255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:119613-119693:1:exon

position:119613:1
position: 119613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119693:1
position: 119693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:119910-120098:1:exon

position:119910:1
position: 119910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120098:1
position: 120098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:120411-121368:1:exon

position:120411:1
position: 120411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110480265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110480265
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen EMF1-alpha-like
translation: MGMVPIKAWLSAYSSENTFEWFSTLPGGFLLEYAGASPVQLRFLRLHSHRATQKVSYSCGAAPERGRPQPRREIRFLADSRDHSYAASLQGCLLNNESSISDTIFQFSTEQLWLLPLRDLAVFHNGDASHQFGFTVGPVCFS
SIO_010081: LOC110480265
subclass of: SO_0000673
so part of: LOC110480265
location: join(119247..119255,119613..119693,119910..120098,120411..120560)
location: region:119247-120560:1
so has part: feature:119247-119255:1:exon
so has part: feature:119613-119693:1:exon
so has part: feature:119910-120098:1:exon
so has part: feature:120411-120560:1:exon

XP_021403769.1
type: Protein
SIO_000068: ncbiprotein

position:120560:1
position: 120560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119247-119255:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:119613-119693:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:119910-120098:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:120411-120560:1:exon

SLC31A2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SLC31A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 121247..133991
location: region:121247-133991:1
so has part: feature:121247-133991:1:exon
subclass of: SO_0000010

110480264
type: Gene
SIO_000068: ncbigene

position:121247:1
position: 121247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133991:1
position: 133991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121247-133991:1:exon

SLC31A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SLC31A2
product: solute carrier family 31 member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_031506342.1
SIO_010081: SLC31A2
subclass of: SO_0000673
so part of: SLC31A2
location: join(121247..121255,121720..122050,132733..132922,133823..133991)
location: region:121247-133991:1
so has part: feature:121247-121255:1:exon
so has part: feature:121720-122050:1:exon
so has part: feature:132733-132922:1:exon
so has part: feature:133823-133991:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:121247-121255:1:exon

position:121255:1
position: 121255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:121720-122050:1:exon

position:121720:1
position: 121720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122050:1
position: 122050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:132733-132922:1:exon

position:132733:1
position: 132733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132922:1
position: 132922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:133823-133991:1:exon

position:133823:1
position: 133823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC31A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SLC31A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable low affinity copper uptake protein 2
translation: MGMLNTPKTSFRIFGVQTPAASSRKPPVRCRAKGKRKPGGGARAGPREEGAGEGPPALREPGSAGQSRDSDSSAGQSRDSAGQSRDSDSSAGQSRDSAGQRRDSDSSAGQSRDMSGVSPAGMVLSVLLILLLAVLYEAVKMGKAVLLRRALLALPRSLSQEALTEPREGDSDPAQGRWFWFHVGQTLFHVVQVVLGYMVMLAVMSYNAWIFLGAIAGSTLGYFMVYPLLGRG
SIO_010081: SLC31A2
subclass of: SO_0000673
so part of: SLC31A2
location: join(121247..121255,121720..122050,132733..132922,133823..133991)
location: region:121247-133991:1
so has part: feature:121247-121255:1:exon
so has part: feature:121720-122050:1:exon
so has part: feature:132733-132922:1:exon
so has part: feature:133823-133991:1:exon

XP_031362202.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121247-121255:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:121720-122050:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:132733-132922:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133823-133991:1:exon

NIBAN2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: NIBAN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<137068..169963)
location: region:137068-169963:-1
so has part: feature:137068-169963:-1:exon
subclass of: SO_0000010

110480263
type: Gene
SIO_000068: ncbigene

position:137068:-1
position: 137068
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:169963:-1
position: 169963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137068-169963:-1:exon

NIBAN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: NIBAN2
product: niban apoptosis regulator 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021548092.1
SIO_010081: NIBAN2
subclass of: SO_0000673
so part of: NIBAN2
location: complement(join(<137068..137585,138340..138451,138560..138667,139076..139192,139862..140017,140179..140366,140714..140876,142063..142167,142248..142363,146356..146523,148090..148195,148894..149022,153356..153486,169876..169963))
location: region:137068-169963:-1
so has part: feature:169876-169963:-1:exon
so has part: feature:153356-153486:-1:exon
so has part: feature:148894-149022:-1:exon
so has part: feature:148090-148195:-1:exon
so has part: feature:146356-146523:-1:exon
so has part: feature:142248-142363:-1:exon
so has part: feature:142063-142167:-1:exon
so has part: feature:140714-140876:-1:exon
so has part: feature:140179-140366:-1:exon
so has part: feature:139862-140017:-1:exon
so has part: feature:139076-139192:-1:exon
so has part: feature:138560-138667:-1:exon
so has part: feature:138340-138451:-1:exon
so has part: feature:137068-137585:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:169876-169963:-1:exon

position:169876:-1
position: 169876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:153356-153486:-1:exon

position:153356:-1
position: 153356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153486:-1
position: 153486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:148894-149022:-1:exon

position:148894:-1
position: 148894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149022:-1
position: 149022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:148090-148195:-1:exon

position:148090:-1
position: 148090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148195:-1
position: 148195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:146356-146523:-1:exon

position:146356:-1
position: 146356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146523:-1
position: 146523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:142248-142363:-1:exon

position:142248:-1
position: 142248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142363:-1
position: 142363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:142063-142167:-1:exon

position:142063:-1
position: 142063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142167:-1
position: 142167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:140714-140876:-1:exon

position:140714:-1
position: 140714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140876:-1
position: 140876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:140179-140366:-1:exon

position:140179:-1
position: 140179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140366:-1
position: 140366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:139862-140017:-1:exon

position:139862:-1
position: 139862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140017:-1
position: 140017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:139076-139192:-1:exon

position:139076:-1
position: 139076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139192:-1
position: 139192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:138560-138667:-1:exon

position:138560:-1
position: 138560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138667:-1
position: 138667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:138340-138451:-1:exon

position:138340:-1
position: 138340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138451:-1
position: 138451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:137068-137585:-1:exon

position:137585:-1
position: 137585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NIBAN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: NIBAN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Niban 2
translation: MGDVVSTHLDEGRRQHIAEKTGKVLGEFCQCYKEQFGVALFNSVRYEIEGAGGPQAQLLHRKVPLEDHVIYSGNIFQYIEENKKWRNRFCVVPHNYGLVLYENKLAYERELPPRVLVNSAGYKVLTSVEQYLELVNNSLPGVTPKSGHSPILKCPTDFPLILWHPYARHYYFCVMTGKEQEKWRAVFQDCVRHCNNGISEESRVEAPAFTDAIRMYRQSKEQYGTWDMLCGNETQVLSNLVMEELLPELRSTIGPRLKGKAPERQRTWIQVSDAVYRMVYELAKAQYDAAVARCEQERPQLESTIRTDMDQIITSKEHLASKIRAFVLPKAEVCVRNHVQPYISSILEALMTPTSQGFAEAREVFFKEVTDMNMNVVNEGGLEKLVEYMEKLSHLAFHPVKMQSCYEKMDQLKLEGLQQRFDVSSTSVFKQRAQIHMRQQMDDAVYTFETLLHQELGKLQGKDDLCKSIQRILERVLKKFDYDSSTVRKKFFREALLQITIPFLLKKLAPTCKGELAKFQELIFEDFASFILVENTYEEVVLQSVMKDIMQAVKEAAVQRKHNLYRDSMVMHNSDPNLHLLGEGLPIDWSEEYSGQPEAEPAAERRRRAKQVVSVIQDDEGALPYGAEALLQPGSPEPQEPGQAHPGVPPSPPDAVKEIREALAQENLGDGTGAEERLMNGTDGSGASEEGVLLAGAAPGNATQQGPARDGDGVHCAMVTSPAP
SIO_010081: NIBAN2
subclass of: SO_0000673
so part of: NIBAN2
location: complement(join(<137068..137585,138340..138451,138560..138667,139076..139192,139862..140017,140179..140366,140714..140876,142063..142167,142248..142363,146356..146523,148090..148195,148894..149022,153356..153486,169876..169930))
location: region:137068-169930:-1
so has part: feature:169876-169930:-1:exon
so has part: feature:153356-153486:-1:exon
so has part: feature:148894-149022:-1:exon
so has part: feature:148090-148195:-1:exon
so has part: feature:146356-146523:-1:exon
so has part: feature:142248-142363:-1:exon
so has part: feature:142063-142167:-1:exon
so has part: feature:140714-140876:-1:exon
so has part: feature:140179-140366:-1:exon
so has part: feature:139862-140017:-1:exon
so has part: feature:139076-139192:-1:exon
so has part: feature:138560-138667:-1:exon
so has part: feature:138340-138451:-1:exon
so has part: feature:137068-137585:-1:exon

XP_021403767.1
type: Protein
SIO_000068: ncbiprotein

position:169930:-1
position: 169930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169876-169930:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:153356-153486:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:148894-149022:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148090-148195:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:146356-146523:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:142248-142363:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:142063-142167:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:140714-140876:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:140179-140366:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:139862-140017:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:139076-139192:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:138560-138667:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:138340-138451:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:137068-137585:-1:exon

STXBP1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: STXBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 180348..207960
location: region:180348-207960:1
so has part: feature:180348-207960:1:exon
subclass of: SO_0000010

110480269
type: Gene
SIO_000068: ncbigene

position:180348:1
position: 180348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207960:1
position: 207960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180348-207960:1:exon

STXBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: STXBP1
product: syntaxin binding protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021548098.1
SIO_010081: STXBP1
subclass of: SO_0000673
so part of: STXBP1
location: join(180348..180488,195805..195854,196067..196148,197432..197508,197670..197748,197843..197946,198644..198792,199112..199196,199360..199490,200159..200266,200383..200443,200980..201045,201178..201258,201353..201491,201669..201778,201888..201989,203095..203180,204089..204243,205052..205175,206285..207960)
location: region:180348-207960:1
so has part: feature:180348-180488:1:exon
so has part: feature:195805-195854:1:exon
so has part: feature:196067-196148:1:exon
so has part: feature:197432-197508:1:exon
so has part: feature:197670-197748:1:exon
so has part: feature:197843-197946:1:exon
so has part: feature:198644-198792:1:exon
so has part: feature:199112-199196:1:exon
so has part: feature:199360-199490:1:exon
so has part: feature:200159-200266:1:exon
so has part: feature:200383-200443:1:exon
so has part: feature:200980-201045:1:exon
so has part: feature:201178-201258:1:exon
so has part: feature:201353-201491:1:exon
so has part: feature:201669-201778:1:exon
so has part: feature:201888-201989:1:exon
so has part: feature:203095-203180:1:exon
so has part: feature:204089-204243:1:exon
so has part: feature:205052-205175:1:exon
so has part: feature:206285-207960:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:180348-180488:1:exon

position:180488:1
position: 180488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:195805-195854:1:exon

position:195805:1
position: 195805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195854:1
position: 195854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:196067-196148:1:exon

position:196067:1
position: 196067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196148:1
position: 196148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:197432-197508:1:exon

position:197432:1
position: 197432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197508:1
position: 197508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:197670-197748:1:exon

position:197670:1
position: 197670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197748:1
position: 197748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:197843-197946:1:exon

position:197843:1
position: 197843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197946:1
position: 197946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:198644-198792:1:exon

position:198644:1
position: 198644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198792:1
position: 198792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:199112-199196:1:exon

position:199112:1
position: 199112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199196:1
position: 199196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:199360-199490:1:exon

position:199360:1
position: 199360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199490:1
position: 199490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:200159-200266:1:exon

position:200159:1
position: 200159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200266:1
position: 200266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:200383-200443:1:exon

position:200383:1
position: 200383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200443:1
position: 200443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:200980-201045:1:exon

position:200980:1
position: 200980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201045:1
position: 201045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:201178-201258:1:exon

position:201178:1
position: 201178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201258:1
position: 201258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:201353-201491:1:exon

position:201353:1
position: 201353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201491:1
position: 201491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:201669-201778:1:exon

position:201669:1
position: 201669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201778:1
position: 201778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:201888-201989:1:exon

position:201888:1
position: 201888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201989:1
position: 201989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:203095-203180:1:exon

position:203095:1
position: 203095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203180:1
position: 203180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:204089-204243:1:exon

position:204089:1
position: 204089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204243:1
position: 204243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:205052-205175:1:exon

position:205052:1
position: 205052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205175:1
position: 205175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:206285-207960:1:exon

position:206285:1
position: 206285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STXBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: STXBP1
product: syntaxin binding protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021548099.2
SIO_010081: STXBP1
subclass of: SO_0000673
so part of: STXBP1
location: join(180349..180488,195805..195854,196067..196148,197432..197508,197670..197748,197843..197946,198644..198792,199112..199196,199360..199490,200159..200266,200383..200443,200980..201045,201178..201258,201353..201491,201669..201778,201888..201989,203095..203180,204089..204243,206285..207960)
location: region:180349-207960:1
so has part: feature:180349-180488:1:exon
so has part: feature:195805-195854:1:exon
so has part: feature:196067-196148:1:exon
so has part: feature:197432-197508:1:exon
so has part: feature:197670-197748:1:exon
so has part: feature:197843-197946:1:exon
so has part: feature:198644-198792:1:exon
so has part: feature:199112-199196:1:exon
so has part: feature:199360-199490:1:exon
so has part: feature:200159-200266:1:exon
so has part: feature:200383-200443:1:exon
so has part: feature:200980-201045:1:exon
so has part: feature:201178-201258:1:exon
so has part: feature:201353-201491:1:exon
so has part: feature:201669-201778:1:exon
so has part: feature:201888-201989:1:exon
so has part: feature:203095-203180:1:exon
so has part: feature:204089-204243:1:exon
so has part: feature:206285-207960:1:exon

position:180349:1
position: 180349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180349-180488:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:195805-195854:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196067-196148:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:197432-197508:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:197670-197748:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:197843-197946:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:198644-198792:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:199112-199196:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:199360-199490:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:200159-200266:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:200383-200443:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:200980-201045:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:201178-201258:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:201353-201491:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:201669-201778:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:201888-201989:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:203095-203180:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:204089-204243:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:206285-207960:1:exon

STXBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: STXBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syntaxin-binding protein 1 isoform X2
translation: MAPIGLKAVVGEKIMHDVIRKVKKKGEWKVLVVDQLSMRMLSSCCKMTDIMTEGITIVEDINKRREPLPSLEAVYLITPSEKSIHSLINDFKDPPTSKYRAAHVFFTDSCPDALFNELVKSRAAKVIKTLTEINIAFLPSESQVYSLDSADSFQSFYSPHKAQMKNPILERLAEQIATLCATLKEYPAVRYRGDYKDNAMLAQLIQDKLDAYKADDPTMGEGPDKARSQLLILDRGFDPASPVLHELTFQAMSYDLLPIENDVYKYETSGIGEARIKEVLLDEDDDLWVTLRHKHIAEVSQEVTRSLKEFSSSKRMNTGDKTTMRDLSQMLKKMPQYQKELSKYSTHLHLAEDCMKHYQGTVDKLCRVEQDLAMGTDAEGEKIKDPMRAIVPILLDGNVSTYDKIRIILLYIFLKNGITEENLNKLIQHAQIPAEDSEIITNMAHLGVPIITDSTLRRRSKPERKERISEQTYQLSRWTPVIKDIMEDAIDDKLDTKHYPYISTRSSASFSTTAVSARYGHWHKNKAPGEYRSGPRLIIFILGGVSMNEMRCAYEVTQASGKWEVLIGSTHILTPQKLLDTLKKLNKTEEESSS
SIO_010081: STXBP1
subclass of: SO_0000673
so part of: STXBP1
location: join(180452..180488,195805..195854,196067..196148,197432..197508,197670..197748,197843..197946,198644..198792,199112..199196,199360..199490,200159..200266,200383..200443,200980..201045,201178..201258,201353..201491,201669..201778,201888..201989,203095..203180,204089..204243,206285..206367)
location: region:180452-206367:1
so has part: feature:180452-180488:1:exon
so has part: feature:195805-195854:1:exon
so has part: feature:196067-196148:1:exon
so has part: feature:197432-197508:1:exon
so has part: feature:197670-197748:1:exon
so has part: feature:197843-197946:1:exon
so has part: feature:198644-198792:1:exon
so has part: feature:199112-199196:1:exon
so has part: feature:199360-199490:1:exon
so has part: feature:200159-200266:1:exon
so has part: feature:200383-200443:1:exon
so has part: feature:200980-201045:1:exon
so has part: feature:201178-201258:1:exon
so has part: feature:201353-201491:1:exon
so has part: feature:201669-201778:1:exon
so has part: feature:201888-201989:1:exon
so has part: feature:203095-203180:1:exon
so has part: feature:204089-204243:1:exon
so has part: feature:206285-206367:1:exon

XP_021403774.1
type: Protein
SIO_000068: ncbiprotein

position:180452:1
position: 180452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206367:1
position: 206367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180452-180488:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:195805-195854:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196067-196148:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:197432-197508:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:197670-197748:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:197843-197946:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:198644-198792:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:199112-199196:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:199360-199490:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:200159-200266:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:200383-200443:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:200980-201045:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:201178-201258:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:201353-201491:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:201669-201778:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:201888-201989:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:203095-203180:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:204089-204243:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:206285-206367:1:exon

STXBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: STXBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syntaxin-binding protein 1 isoform X1
translation: MAPIGLKAVVGEKIMHDVIRKVKKKGEWKVLVVDQLSMRMLSSCCKMTDIMTEGITIVEDINKRREPLPSLEAVYLITPSEKSIHSLINDFKDPPTSKYRAAHVFFTDSCPDALFNELVKSRAAKVIKTLTEINIAFLPSESQVYSLDSADSFQSFYSPHKAQMKNPILERLAEQIATLCATLKEYPAVRYRGDYKDNAMLAQLIQDKLDAYKADDPTMGEGPDKARSQLLILDRGFDPASPVLHELTFQAMSYDLLPIENDVYKYETSGIGEARIKEVLLDEDDDLWVTLRHKHIAEVSQEVTRSLKEFSSSKRMNTGDKTTMRDLSQMLKKMPQYQKELSKYSTHLHLAEDCMKHYQGTVDKLCRVEQDLAMGTDAEGEKIKDPMRAIVPILLDGNVSTYDKIRIILLYIFLKNGITEENLNKLIQHAQIPAEDSEIITNMAHLGVPIITDSTLRRRSKPERKERISEQTYQLSRWTPVIKDIMEDAIDDKLDTKHYPYISTRSSASFSTTAVSARYGHWHKNKAPGEYRSGPRLIIFILGGVSMNEMRCAYEVTQASGKWEVLIGSTHILTPTKFLMDLRHPDFRDSTRVSFEDQAPAME
SIO_010081: STXBP1
subclass of: SO_0000673
so part of: STXBP1
location: join(180452..180488,195805..195854,196067..196148,197432..197508,197670..197748,197843..197946,198644..198792,199112..199196,199360..199490,200159..200266,200383..200443,200980..201045,201178..201258,201353..201491,201669..201778,201888..201989,203095..203180,204089..204243,205052..205161)
location: region:180452-205161:1
so has part: feature:180452-180488:1:exon
so has part: feature:195805-195854:1:exon
so has part: feature:196067-196148:1:exon
so has part: feature:197432-197508:1:exon
so has part: feature:197670-197748:1:exon
so has part: feature:197843-197946:1:exon
so has part: feature:198644-198792:1:exon
so has part: feature:199112-199196:1:exon
so has part: feature:199360-199490:1:exon
so has part: feature:200159-200266:1:exon
so has part: feature:200383-200443:1:exon
so has part: feature:200980-201045:1:exon
so has part: feature:201178-201258:1:exon
so has part: feature:201353-201491:1:exon
so has part: feature:201669-201778:1:exon
so has part: feature:201888-201989:1:exon
so has part: feature:203095-203180:1:exon
so has part: feature:204089-204243:1:exon
so has part: feature:205052-205161:1:exon

XP_021403773.1
type: Protein
SIO_000068: ncbiprotein

position:205161:1
position: 205161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180452-180488:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:195805-195854:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196067-196148:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:197432-197508:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:197670-197748:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:197843-197946:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:198644-198792:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:199112-199196:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:199360-199490:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:200159-200266:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:200383-200443:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:200980-201045:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:201178-201258:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:201353-201491:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:201669-201778:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:201888-201989:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:203095-203180:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:204089-204243:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:205052-205161:1:exon

AKNA
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: AKNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(211358..224532)
location: region:211358-224532:-1
so has part: feature:211358-224532:-1:exon
subclass of: SO_0000010

110480262
type: Gene
SIO_000068: ncbigene

position:211358:-1
position: 211358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224532:-1
position: 224532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211358-224532:-1:exon

AKNA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: AKNA
product: AT-hook transcription factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 45% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021548091.1
SIO_010081: AKNA
subclass of: SO_0000673
so part of: AKNA
location: complement(join(211358..211551,213020..213133,213515..213618,213713..213886,214138..214324,214513..214742,214933..215039,215133..215331,215497..215670,215756..215881,216119..216223,216309..216571,216965..217125,217299..217446,217887..217961,218413..219368,219485..219761,224357..224532))
location: region:211358-224532:-1
so has part: feature:224357-224532:-1:exon
so has part: feature:219485-219761:-1:exon
so has part: feature:218413-219368:-1:exon
so has part: feature:217887-217961:-1:exon
so has part: feature:217299-217446:-1:exon
so has part: feature:216965-217125:-1:exon
so has part: feature:216309-216571:-1:exon
so has part: feature:216119-216223:-1:exon
so has part: feature:215756-215881:-1:exon
so has part: feature:215497-215670:-1:exon
so has part: feature:215133-215331:-1:exon
so has part: feature:214933-215039:-1:exon
so has part: feature:214513-214742:-1:exon
so has part: feature:214138-214324:-1:exon
so has part: feature:213713-213886:-1:exon
so has part: feature:213515-213618:-1:exon
so has part: feature:213020-213133:-1:exon
so has part: feature:211358-211551:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:224357-224532:-1:exon

position:224357:-1
position: 224357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:219485-219761:-1:exon

position:219485:-1
position: 219485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219761:-1
position: 219761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:218413-219368:-1:exon

position:218413:-1
position: 218413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219368:-1
position: 219368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:217887-217961:-1:exon

position:217887:-1
position: 217887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217961:-1
position: 217961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:217299-217446:-1:exon

position:217299:-1
position: 217299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217446:-1
position: 217446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:216965-217125:-1:exon

position:216965:-1
position: 216965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217125:-1
position: 217125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:216309-216571:-1:exon

position:216309:-1
position: 216309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216571:-1
position: 216571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:216119-216223:-1:exon

position:216119:-1
position: 216119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216223:-1
position: 216223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:215756-215881:-1:exon

position:215756:-1
position: 215756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215881:-1
position: 215881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:215497-215670:-1:exon

position:215497:-1
position: 215497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215670:-1
position: 215670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:215133-215331:-1:exon

position:215133:-1
position: 215133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215331:-1
position: 215331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:214933-215039:-1:exon

position:214933:-1
position: 214933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215039:-1
position: 215039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:214513-214742:-1:exon

position:214513:-1
position: 214513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214742:-1
position: 214742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:214138-214324:-1:exon

position:214138:-1
position: 214138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214324:-1
position: 214324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:213713-213886:-1:exon

position:213713:-1
position: 213713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213886:-1
position: 213886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:213515-213618:-1:exon

position:213515:-1
position: 213515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213618:-1
position: 213618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:213020-213133:-1:exon

position:213020:-1
position: 213020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213133:-1
position: 213133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:211358-211551:-1:exon

position:211551:-1
position: 211551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AKNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: AKNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule organization protein AKNA
translation: MASPAPWLRWTQTELTRWPGQEEEEEEEEEEDDFERRMDEDGVIGLGEGARSPPWGDSEDLEEGSPAEEGRWHPRQDPAEEDEERGSSGGDEGPWGAESDGDPYPELSPGGCWGSGSSGSPEAVRDGRALCQPRGCSTDRGDTSGLSDTSPGPGTPSRQHQDWGTAADTIGGHRQEWSPRRSLPLQLSADGPSPERVPEPQRAGTGMPAPGTAGLAPAGQPQGAGNARAPQGHGRSRAPKKAAPAVVPPKPARQSRSLSPRRRTGAKGTRDPSGTGTEGTQYGRGRLNHPLPDLSKVEARVKFDQSYRPPRGRVLPARPRGPGGPIGFKSPAEIVREVLLSSGEGVSPQPPSTAGLPQEFRSPRQATALVQQLQDDYHKLLTKYAEAENTIDQLRLGARVSLFSDPPQPSRSLAVGTVGTGSRVVTLSIPQARTAALGAATAPASPGAAAAAPAPSEQGGSPQPRSPPVPGGGCPTCPGPCCCPGPRLTRALAGQSRRLQAQVESFESWLRAGTPTPSEQLQVRLSLPEPQPGGQQGHGGCPRPSGQARTPHPVQQRMRMLKDAQDALEREYLRGRQQLPAAAGGFDPDRAVEGEIYRLGLRLEGLKERLEPGGRRQPLPHPSPHPALVEGPRGTAGDSDGVAGGLPWPLWHKQRQVEEDFGDLLEQYKHFKSLPESLSLEQLSLAGSGSQEEVDAPAAGDGGPSKVPCRTRSLEEEPNLDSLPLHLQQRRAATLPPRGPPNLEETRGQPSPVTAEEPPASAKPLEVPGPPRVPLSLRGTGSSATQHGPRTEQRIVSPETDSGFVGSEASRVSPPVHTPEHPPPGPGTPGSLGPSVPIPSSLRTPRKRETSPLPSETALMGIYPPGGTGGPRLPPSSPSQSSSPPRWAESAGSEVGPDPDGDGTRTDSEVGDRSCASAGGHPIAMARSPSSPLPSPETPSPTLLSPDPPSPDPAACDLLGSRLERDRAIRALQDEVWRLRLRLEESLLHSRSHPGGKAPSCLTPAGRQPLASGTSAPQDAAPSGDPSPPVRGRVAPGLTPTRRERSASLPRDRPELDLASESEPSPARPRAPPALRKHLGKPPGPVTSRGQHTGDTERPPRPRGQQRCLSLRLEELEELDWSLSRAVQAARSARLATSRISRALAAELGRPRGLRGSCLS
SIO_010081: AKNA
subclass of: SO_0000673
so part of: AKNA
location: complement(join(211358..211551,213020..213133,213515..213618,213713..213886,214138..214324,214513..214742,214933..215039,215133..215331,215497..215670,215756..215881,216119..216223,216309..216571,216965..217125,217299..217446,217887..217961,218413..219368,219485..219650))
location: region:211358-219650:-1
so has part: feature:219485-219650:-1:exon
so has part: feature:218413-219368:-1:exon
so has part: feature:217887-217961:-1:exon
so has part: feature:217299-217446:-1:exon
so has part: feature:216965-217125:-1:exon
so has part: feature:216309-216571:-1:exon
so has part: feature:216119-216223:-1:exon
so has part: feature:215756-215881:-1:exon
so has part: feature:215497-215670:-1:exon
so has part: feature:215133-215331:-1:exon
so has part: feature:214933-215039:-1:exon
so has part: feature:214513-214742:-1:exon
so has part: feature:214138-214324:-1:exon
so has part: feature:213713-213886:-1:exon
so has part: feature:213515-213618:-1:exon
so has part: feature:213020-213133:-1:exon
so has part: feature:211358-211551:-1:exon

XP_021403766.1
type: Protein
SIO_000068: ncbiprotein

position:219650:-1
position: 219650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219485-219650:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218413-219368:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217887-217961:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:217299-217446:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:216965-217125:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:216309-216571:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:216119-216223:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:215756-215881:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:215497-215670:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:215133-215331:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:214933-215039:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:214513-214742:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:214138-214324:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:213713-213886:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:213515-213618:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:213020-213133:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:211358-211551:-1:exon

LOC110480260
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110480260
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(211940..213597)
location: region:211940-213597:-1
so has part: feature:211940-213597:-1:exon
subclass of: SO_0000011

110480260
type: Gene
SIO_000068: ncbigene

position:211940:-1
position: 211940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213597:-1
position: 213597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211940-213597:-1:exon

LOC110480260
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110480260
product: uncharacterized LOC110480260, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_002467077.1
SIO_010081: LOC110480260
subclass of: SO_0000673
so part of: LOC110480260
location: complement(join(211940..212031,212228..212353,213020..213187,213515..213597))
location: region:211940-213597:-1
so has part: feature:213515-213597:-1:exon
so has part: feature:213020-213187:-1:exon
so has part: feature:212228-212353:-1:exon
so has part: feature:211940-212031:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:213515-213597:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:213020-213187:-1:exon

position:213187:-1
position: 213187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:212228-212353:-1:exon

position:212228:-1
position: 212228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212353:-1
position: 212353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:211940-212031:-1:exon

position:212031:-1
position: 212031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110480260
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110480260
product: uncharacterized LOC110480260, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004148977.1
SIO_010081: LOC110480260
subclass of: SO_0000673
so part of: LOC110480260
location: complement(join(212785..212931,213020..213187,213515..213597))
location: region:212785-213597:-1
so has part: feature:213515-213597:-1:exon
so has part: feature:213020-213187:-1:exon
so has part: feature:212785-212931:-1:exon

position:212785:-1
position: 212785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213515-213597:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:213020-213187:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:212785-212931:-1:exon

position:212931:-1
position: 212931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110480261
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110480261
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(215641..215982)
location: region:215641-215982:-1
so has part: feature:215641-215982:-1:exon
subclass of: SO_0000011

110480261
type: Gene
SIO_000068: ncbigene

position:215641:-1
position: 215641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215982:-1
position: 215982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215641-215982:-1:exon

LOC110480261
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110480261
product: uncharacterized LOC110480261
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_002467078.1
SIO_010081: LOC110480261
subclass of: SO_0000673
so part of: LOC110480261
location: complement(join(215641..215670,215756..215883,215965..215982))
location: region:215641-215982:-1
so has part: feature:215965-215982:-1:exon
so has part: feature:215756-215883:-1:exon
so has part: feature:215641-215670:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:215965-215982:-1:exon

position:215965:-1
position: 215965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:215756-215883:-1:exon

position:215883:-1
position: 215883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:215641-215670:-1:exon

WHRN
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: WHRN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(225601..277747)
location: region:225601-277747:-1
so has part: feature:225601-277747:-1:exon
subclass of: SO_0000010

110480256
type: Gene
SIO_000068: ncbigene

position:225601:-1
position: 225601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277747:-1
position: 277747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225601-277747:-1:exon

WHRN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: WHRN
product: whirlin, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021548086.1
SIO_010081: WHRN
subclass of: SO_0000673
so part of: WHRN
location: complement(join(225601..226288,226895..227017,227624..227802,229673..230252,231332..231403,235238..235270,238014..238238,238699..238911,240369..240405,241911..242113,262596..262811,277038..277747))
location: region:225601-277747:-1
so has part: feature:277038-277747:-1:exon
so has part: feature:262596-262811:-1:exon
so has part: feature:241911-242113:-1:exon
so has part: feature:240369-240405:-1:exon
so has part: feature:238699-238911:-1:exon
so has part: feature:238014-238238:-1:exon
so has part: feature:235238-235270:-1:exon
so has part: feature:231332-231403:-1:exon
so has part: feature:229673-230252:-1:exon
so has part: feature:227624-227802:-1:exon
so has part: feature:226895-227017:-1:exon
so has part: feature:225601-226288:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:277038-277747:-1:exon

position:277038:-1
position: 277038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:262596-262811:-1:exon

position:262596:-1
position: 262596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262811:-1
position: 262811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:241911-242113:-1:exon

position:241911:-1
position: 241911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242113:-1
position: 242113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:240369-240405:-1:exon

position:240369:-1
position: 240369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240405:-1
position: 240405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:238699-238911:-1:exon

position:238699:-1
position: 238699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238911:-1
position: 238911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:238014-238238:-1:exon

position:238014:-1
position: 238014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238238:-1
position: 238238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:235238-235270:-1:exon

position:235238:-1
position: 235238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235270:-1
position: 235270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:231332-231403:-1:exon

position:231332:-1
position: 231332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231403:-1
position: 231403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:229673-230252:-1:exon

position:229673:-1
position: 229673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230252:-1
position: 230252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:227624-227802:-1:exon

position:227624:-1
position: 227624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227802:-1
position: 227802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:226895-227017:-1:exon

position:226895:-1
position: 226895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227017:-1
position: 227017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:225601-226288:-1:exon

position:226288:-1
position: 226288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WHRN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: WHRN
product: whirlin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021548084.1
SIO_010081: WHRN
subclass of: SO_0000673
so part of: WHRN
location: complement(join(225601..226288,226895..227017,227624..227802,229673..230252,231332..231403,235238..235270,238014..238238,238699..238911,240369..240405,241911..242113,250049..250174,262596..262811,277038..277747))
location: region:225601-277747:-1
so has part: feature:277038-277747:-1:exon
so has part: feature:262596-262811:-1:exon
so has part: feature:250049-250174:-1:exon
so has part: feature:241911-242113:-1:exon
so has part: feature:240369-240405:-1:exon
so has part: feature:238699-238911:-1:exon
so has part: feature:238014-238238:-1:exon
so has part: feature:235238-235270:-1:exon
so has part: feature:231332-231403:-1:exon
so has part: feature:229673-230252:-1:exon
so has part: feature:227624-227802:-1:exon
so has part: feature:226895-227017:-1:exon
so has part: feature:225601-226288:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:277038-277747:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:262596-262811:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:250049-250174:-1:exon

position:250049:-1
position: 250049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250174:-1
position: 250174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:241911-242113:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:240369-240405:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:238699-238911:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:238014-238238:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:235238-235270:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:231332-231403:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:229673-230252:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:227624-227802:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:226895-227017:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:225601-226288:-1:exon

WHRN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: WHRN
product: whirlin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021548085.1
SIO_010081: WHRN
subclass of: SO_0000673
so part of: WHRN
location: complement(join(226106..226288,226895..227017,227624..227802,229673..230252,231332..231403,235238..235270,238014..238220,238699..238911,240369..240405,241911..242113,250049..250174,262596..262811,277038..277637))
location: region:226106-277637:-1
so has part: feature:277038-277637:-1:exon
so has part: feature:262596-262811:-1:exon
so has part: feature:250049-250174:-1:exon
so has part: feature:241911-242113:-1:exon
so has part: feature:240369-240405:-1:exon
so has part: feature:238699-238911:-1:exon
so has part: feature:238014-238220:-1:exon
so has part: feature:235238-235270:-1:exon
so has part: feature:231332-231403:-1:exon
so has part: feature:229673-230252:-1:exon
so has part: feature:227624-227802:-1:exon
so has part: feature:226895-227017:-1:exon
so has part: feature:226106-226288:-1:exon

position:226106:-1
position: 226106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277637:-1
position: 277637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277038-277637:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:262596-262811:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:250049-250174:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:241911-242113:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:240369-240405:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:238699-238911:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:238014-238220:-1:exon

position:238220:-1
position: 238220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:235238-235270:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:231332-231403:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:229673-230252:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:227624-227802:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:226895-227017:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:226106-226288:-1:exon

WHRN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: WHRN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: whirlin isoform X3
translation: MSAELDGVSVHSSSSSSGSLGSAAGPAPRPLSANVRRLHQALTALLSEAERERFILCLNAYHGRRNVCDLVRSLRALLDGPRRRQLLPLLRLVLPRSDQLLFDQYTAEGPYLPPPGRPPPPPAPPPVVPGELRQVTLRRSKAHEGLGFSIRGGAEHGVGIYVSLVEPGSLAEREGLRVGDQILGVNGKSLDRVTHAEAVKVLKGCKKLNLAVHSVGRIPGGYVTNHIYTWVDPQGRSVSPPTGLPHHQNSSLRRDSEKRSHLQLLQEGDEKKVGDQILEVNGRSFLSIPHDEAVKLLKSSRHLIMTVKDIGRLPHARTTVDETRWISSSQLGETLVSSAGAVGDHAMDVAARPVFYRGLAGSQVTLSTMVNQSRVMLEEQARHLLNEQERATMGYYLDEYKEGNISVDALVMALFELLNTHAKLCVPGQFSLLSEVRGVISPQDLDRFDNLVLKREIESMKARQPAGPSPDSYSMMSYSDTVSSSSSHFTATTVSSARERLLWLIDLMENTSELEGAGDCHQSSINTLPDVSLDDLSSFPEEPPNFKPPPPPSAPQTLDPSSAQHRLPGKDKPKRPSSESSQSGLFFVAPRNPSPPANPPEKDTVSVTSTASTSTEDSAPGAIYATISPSSARGSRRPADTPLSLLGQHPIGPFPRVQSPTRLKSPSPEGPQSPPSPCPPPPPAHPAPPPPDKGSPQANQHFIMVEVHQPNSEPDVNEVRPLPQARASTLSQLSDSGQTLSEDSGVDIGEAETSGKDKSRQPGPGKSRSPKEAVRSEGAAEGASKPPGLLEPTSCLIRVSKSAPTLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGKLKVGHVILEVNGTGLRGKEHREAARIIAEAFKLKDKDYIDFLVTEFNVAL
SIO_010081: WHRN
subclass of: SO_0000673
so part of: WHRN
location: complement(join(226106..226288,226895..227017,227624..227802,229673..230252,231332..231403,235238..235270,238014..238238,238699..238911,240369..240405,241911..242113,262596..262811,277038..277637))
location: region:226106-277637:-1
so has part: feature:277038-277637:-1:exon
so has part: feature:262596-262811:-1:exon
so has part: feature:241911-242113:-1:exon
so has part: feature:240369-240405:-1:exon
so has part: feature:238699-238911:-1:exon
so has part: feature:238014-238238:-1:exon
so has part: feature:235238-235270:-1:exon
so has part: feature:231332-231403:-1:exon
so has part: feature:229673-230252:-1:exon
so has part: feature:227624-227802:-1:exon
so has part: feature:226895-227017:-1:exon
so has part: feature:226106-226288:-1:exon

XP_021403761.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:277038-277637:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:262596-262811:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:241911-242113:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240369-240405:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:238699-238911:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:238014-238238:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:235238-235270:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:231332-231403:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:229673-230252:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:227624-227802:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:226895-227017:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:226106-226288:-1:exon

WHRN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: WHRN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: whirlin isoform X2
translation: MSAELDGVSVHSSSSSSGSLGSAAGPAPRPLSANVRRLHQALTALLSEAERERFILCLNAYHGRRNVCDLVRSLRALLDGPRRRQLLPLLRLVLPRSDQLLFDQYTAEGPYLPPPGRPPPPPAPPPVVPGELRQVTLRRSKAHEGLGFSIRGGAEHGVGIYVSLVEPGSLAEREGLRVGDQILGVNGKSLDRVTHAEAVKVLKGCKKLNLAVHSVGRIPGGYVTNHIYTWVDPQGRSVSPPTGLPHHQNSSLRRDSEKRSHLQLLQEGDEKKVNLVLNEGKSLGLMIRGGAEYSLGIYITGVDKGSEAESTGLKVGDQILEVNGRSFLSIPHDEAVKLLKSSRHLIMTVKDIGRLPHARTTVDETRWISSSQLGETLVSSAGAVGDHAMDVAARPVFYRGLAGSQVTLSTMVNQSRVMLEEQARHLLNEQERATMGYYLDEYKEGNISVDALVMALFELLNTHAKFSLLSEVRGVISPQDLDRFDNLVLKREIESMKARQPAGPSPDSYSMMSYSDTVSSSSSHFTATTVSSARERLLWLIDLMENTSELEGAGDCHQSSINTLPDVSLDDLSSFPEEPPNFKPPPPPSAPQTLDPSSAQHRLPGKDKPKRPSSESSQSGLFFVAPRNPSPPANPPEKDTVSVTSTASTSTEDSAPGAIYATISPSSARGSRRPADTPLSLLGQHPIGPFPRVQSPTRLKSPSPEGPQSPPSPCPPPPPAHPAPPPPDKGSPQANQHFIMVEVHQPNSEPDVNEVRPLPQARASTLSQLSDSGQTLSEDSGVDIGEAETSGKDKSRQPGPGKSRSPKEAVRSEGAAEGASKPPGLLEPTSCLIRVSKSAPTLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGKLKVGHVILEVNGTGLRGKEHREAARIIAEAFKLKDKDYIDFLVTEFNVAL
SIO_010081: WHRN
subclass of: SO_0000673
so part of: WHRN
location: complement(join(226106..226288,226895..227017,227624..227802,229673..230252,231332..231403,235238..235270,238014..238220,238699..238911,240369..240405,241911..242113,250049..250174,262596..262811,277038..277637))
location: region:226106-277637:-1
so has part: feature:277038-277637:-1:exon
so has part: feature:262596-262811:-1:exon
so has part: feature:250049-250174:-1:exon
so has part: feature:241911-242113:-1:exon
so has part: feature:240369-240405:-1:exon
so has part: feature:238699-238911:-1:exon
so has part: feature:238014-238220:-1:exon
so has part: feature:235238-235270:-1:exon
so has part: feature:231332-231403:-1:exon
so has part: feature:229673-230252:-1:exon
so has part: feature:227624-227802:-1:exon
so has part: feature:226895-227017:-1:exon
so has part: feature:226106-226288:-1:exon

XP_021403760.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:277038-277637:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:262596-262811:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:250049-250174:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:241911-242113:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:240369-240405:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:238699-238911:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:238014-238220:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:235238-235270:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:231332-231403:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:229673-230252:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:227624-227802:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:226895-227017:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:226106-226288:-1:exon

WHRN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: WHRN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: whirlin isoform X1
translation: MSAELDGVSVHSSSSSSGSLGSAAGPAPRPLSANVRRLHQALTALLSEAERERFILCLNAYHGRRNVCDLVRSLRALLDGPRRRQLLPLLRLVLPRSDQLLFDQYTAEGPYLPPPGRPPPPPAPPPVVPGELRQVTLRRSKAHEGLGFSIRGGAEHGVGIYVSLVEPGSLAEREGLRVGDQILGVNGKSLDRVTHAEAVKVLKGCKKLNLAVHSVGRIPGGYVTNHIYTWVDPQGRSVSPPTGLPHHQNSSLRRDSEKRSHLQLLQEGDEKKVNLVLNEGKSLGLMIRGGAEYSLGIYITGVDKGSEAESTGLKVGDQILEVNGRSFLSIPHDEAVKLLKSSRHLIMTVKDIGRLPHARTTVDETRWISSSQLGETLVSSAGAVGDHAMDVAARPVFYRGLAGSQVTLSTMVNQSRVMLEEQARHLLNEQERATMGYYLDEYKEGNISVDALVMALFELLNTHAKLCVPGQFSLLSEVRGVISPQDLDRFDNLVLKREIESMKARQPAGPSPDSYSMMSYSDTVSSSSSHFTATTVSSARERLLWLIDLMENTSELEGAGDCHQSSINTLPDVSLDDLSSFPEEPPNFKPPPPPSAPQTLDPSSAQHRLPGKDKPKRPSSESSQSGLFFVAPRNPSPPANPPEKDTVSVTSTASTSTEDSAPGAIYATISPSSARGSRRPADTPLSLLGQHPIGPFPRVQSPTRLKSPSPEGPQSPPSPCPPPPPAHPAPPPPDKGSPQANQHFIMVEVHQPNSEPDVNEVRPLPQARASTLSQLSDSGQTLSEDSGVDIGEAETSGKDKSRQPGPGKSRSPKEAVRSEGAAEGASKPPGLLEPTSCLIRVSKSAPTLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGKLKVGHVILEVNGTGLRGKEHREAARIIAEAFKLKDKDYIDFLVTEFNVAL
SIO_010081: WHRN
subclass of: SO_0000673
so part of: WHRN
location: complement(join(226106..226288,226895..227017,227624..227802,229673..230252,231332..231403,235238..235270,238014..238238,238699..238911,240369..240405,241911..242113,250049..250174,262596..262811,277038..277637))
location: region:226106-277637:-1
so has part: feature:277038-277637:-1:exon
so has part: feature:262596-262811:-1:exon
so has part: feature:250049-250174:-1:exon
so has part: feature:241911-242113:-1:exon
so has part: feature:240369-240405:-1:exon
so has part: feature:238699-238911:-1:exon
so has part: feature:238014-238238:-1:exon
so has part: feature:235238-235270:-1:exon
so has part: feature:231332-231403:-1:exon
so has part: feature:229673-230252:-1:exon
so has part: feature:227624-227802:-1:exon
so has part: feature:226895-227017:-1:exon
so has part: feature:226106-226288:-1:exon

XP_021403759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:277038-277637:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:262596-262811:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:250049-250174:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:241911-242113:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:240369-240405:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:238699-238911:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:238014-238238:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:235238-235270:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:231332-231403:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:229673-230252:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:227624-227802:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:226895-227017:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:226106-226288:-1:exon

ATP6V1G1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: ATP6V1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 304294..307729
location: region:304294-307729:1
so has part: feature:304294-307729:1:exon
subclass of: SO_0000010

110480258
type: Gene
SIO_000068: ncbigene

position:304294:1
position: 304294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307729:1
position: 307729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304294-307729:1:exon

ATP6V1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ATP6V1G1
product: ATPase H+ transporting V1 subunit G1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 mRNAs, 38 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_021548088.1
SIO_010081: ATP6V1G1
subclass of: SO_0000673
so part of: ATP6V1G1
location: join(304294..304443,306069..306169,306985..307729)
location: region:304294-307729:1
so has part: feature:304294-304443:1:exon
so has part: feature:306069-306169:1:exon
so has part: feature:306985-307729:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:304294-304443:1:exon

position:304443:1
position: 304443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:306069-306169:1:exon

position:306069:1
position: 306069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306169:1
position: 306169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:306985-307729:1:exon

position:306985:1
position: 306985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATP6V1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ATP6V1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: V-type proton ATPase subunit G 1
translation: MASQSQGIQQLLQAEKRAAEKVAEARKRKNRRLKQAKEEAQAEIEQYRLQREKEFKAKEAAALGSHGSCTTEVEKETQEKMSVIQQNFQKNREVVMSQLLSLVCDIKPEIHVNYRING
SIO_010081: ATP6V1G1
subclass of: SO_0000673
so part of: ATP6V1G1
location: join(304362..304443,306069..306169,306985..307158)
location: region:304362-307158:1
so has part: feature:304362-304443:1:exon
so has part: feature:306069-306169:1:exon
so has part: feature:306985-307158:1:exon

XP_021403763.1
type: Protein
SIO_000068: ncbiprotein

position:304362:1
position: 304362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307158:1
position: 307158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304362-304443:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:306069-306169:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:306985-307158:1:exon

TMEM268
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TMEM268
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 316583..328360
location: region:316583-328360:1
so has part: feature:316583-328360:1:exon
subclass of: SO_0000010

110480268
type: Gene
SIO_000068: ncbigene

position:316583:1
position: 316583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328360:1
position: 328360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316583-328360:1:exon

TMEM268
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TMEM268
product: transmembrane protein 268
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031506315.1
SIO_010081: TMEM268
subclass of: SO_0000673
so part of: TMEM268
location: join(316583..316682,318897..319006,321911..322018,323135..323284,324700..324810,326213..326290,327186..327371,328163..328360)
location: region:316583-328360:1
so has part: feature:316583-316682:1:exon
so has part: feature:318897-319006:1:exon
so has part: feature:321911-322018:1:exon
so has part: feature:323135-323284:1:exon
so has part: feature:324700-324810:1:exon
so has part: feature:326213-326290:1:exon
so has part: feature:327186-327371:1:exon
so has part: feature:328163-328360:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:316583-316682:1:exon

position:316682:1
position: 316682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:318897-319006:1:exon

position:318897:1
position: 318897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319006:1
position: 319006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:321911-322018:1:exon

position:321911:1
position: 321911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322018:1
position: 322018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:323135-323284:1:exon

position:323135:1
position: 323135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323284:1
position: 323284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:324700-324810:1:exon

position:324700:1
position: 324700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324810:1
position: 324810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:326213-326290:1:exon

position:326213:1
position: 326213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326290:1
position: 326290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:327186-327371:1:exon

position:327186:1
position: 327186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327371:1
position: 327371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:328163-328360:1:exon

position:328163:1
position: 328163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM268
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TMEM268
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 268
translation: MAQKSQVGGSEKNGSSLLYSKSDFKEGALQWVTEPPQGRVLLVLSMDNTCPTSSFDMDLCADKLQSLGIQVPMDPWRRLIQEGVLRPEVRRYLFYSSRGFQIAMAMVFYISLWTNLYSTLQLCSLGHSWGAGVLVTLVALALTALVILVIDGHQRKLNVNTDVRLAAVNEIFIKHSIILGITDVLDGPHNTLQLWFVHFSPEPCLQALAAHITHLQGTQAGLRQRLNKLWVALDVAVQPELRVEEEAPSEESPLLSSKVTLNKDPVICSELLHLIPEGPPQAMAQQLLVIFSACYVRLLVTGRLPRASPGGHLGHSSAPCPCQFIQSTVLHPQHCWGRGS
SIO_010081: TMEM268
subclass of: SO_0000673
so part of: TMEM268
location: join(316583..316682,318897..319006,321911..322018,323135..323284,324700..324810,326213..326290,327186..327371,328163..328342)
location: region:316583-328342:1
so has part: feature:316583-316682:1:exon
so has part: feature:318897-319006:1:exon
so has part: feature:321911-322018:1:exon
so has part: feature:323135-323284:1:exon
so has part: feature:324700-324810:1:exon
so has part: feature:326213-326290:1:exon
so has part: feature:327186-327371:1:exon
so has part: feature:328163-328342:1:exon

XP_031362175.1
type: Protein
SIO_000068: ncbiprotein

position:328342:1
position: 328342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316583-316682:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:318897-319006:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:321911-322018:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:323135-323284:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:324700-324810:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:326213-326290:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:327186-327371:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:328163-328342:1:exon

LOC110480267
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110480267
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(330248..333142)
location: region:330248-333142:-1
so has part: feature:330248-333142:-1:exon
subclass of: SO_0000011

110480267
type: Gene
SIO_000068: ncbigene

position:330248:-1
position: 330248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333142:-1
position: 333142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330248-333142:-1:exon

LOC110480267
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110480267
product: uncharacterized LOC110480267
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_002467079.1
SIO_010081: LOC110480267
subclass of: SO_0000673
so part of: LOC110480267
location: complement(join(330248..330933,332668..332769,333027..333142))
location: region:330248-333142:-1
so has part: feature:333027-333142:-1:exon
so has part: feature:332668-332769:-1:exon
so has part: feature:330248-330933:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:333027-333142:-1:exon

position:333027:-1
position: 333027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:332668-332769:-1:exon

position:332668:-1
position: 332668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332769:-1
position: 332769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:330248-330933:-1:exon

position:330933:-1
position: 330933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TNFSF15
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TNFSF15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(409698..425877)
location: region:409698-425877:-1
so has part: feature:409698-425877:-1:exon
subclass of: SO_0000010

110482268
type: Gene
SIO_000068: ncbigene

position:409698:-1
position: 409698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425877:-1
position: 425877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409698-425877:-1:exon

TNFSF15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TNFSF15
product: TNF superfamily member 15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021551402.2
SIO_010081: TNFSF15
subclass of: SO_0000673
so part of: TNFSF15
location: complement(join(409698..410288,416499..416546,417739..417790,425621..425877))
location: region:409698-425877:-1
so has part: feature:425621-425877:-1:exon
so has part: feature:417739-417790:-1:exon
so has part: feature:416499-416546:-1:exon
so has part: feature:409698-410288:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:425621-425877:-1:exon

position:425621:-1
position: 425621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:417739-417790:-1:exon

position:417739:-1
position: 417739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417790:-1
position: 417790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:416499-416546:-1:exon

position:416499:-1
position: 416499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:416546:-1
position: 416546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:409698-410288:-1:exon

position:410288:-1
position: 410288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TNFSF15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TNFSF15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor ligand superfamily member 15
translation: MESAAEMGAEAAGSAHGAGMRLRQDLRRIRCALLLCLLAVLLLMLPTAYLLLGNLRAPSSCGSQVTEERGSHFLKQRAVAAVTDTLSSAEKPRAHLTVKKQDLASTVGSHLPILQWEDKRGLAFTKNNLSYSSNALVIPVSGDYYVYAQVTFRGPVESSHKASSVTEIITKVTDSYPEPTQLLTGTKTLSENGNGWFQPIYLGAVVSLEVGDKLMVNVSDIKLVDYTKEHKTFFGAFLL
SIO_010081: TNFSF15
subclass of: SO_0000673
so part of: TNFSF15
location: complement(join(409861..410288,416499..416546,417739..417790,425621..425812))
location: region:409861-425812:-1
so has part: feature:425621-425812:-1:exon
so has part: feature:417739-417790:-1:exon
so has part: feature:416499-416546:-1:exon
so has part: feature:409861-410288:-1:exon

XP_021407077.1
type: Protein
SIO_000068: ncbiprotein

position:409861:-1
position: 409861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425812:-1
position: 425812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425621-425812:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:417739-417790:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:416499-416546:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:409861-410288:-1:exon

LOC110482295
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110482295
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(464939..485181)
location: region:464939-485181:-1
so has part: feature:464939-485181:-1:exon
subclass of: SO_0000010

110482295
type: Gene
SIO_000068: ncbigene

position:464939:-1
position: 464939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485181:-1
position: 485181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464939-485181:-1:exon

LOC110482295
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110482295
product: tumor necrosis factor ligand superfamily member 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021551458.1
SIO_010081: LOC110482295
subclass of: SO_0000673
so part of: LOC110482295
location: complement(join(464939..465330,465924..465995,477381..477426,484987..485181))
location: region:464939-485181:-1
so has part: feature:484987-485181:-1:exon
so has part: feature:477381-477426:-1:exon
so has part: feature:465924-465995:-1:exon
so has part: feature:464939-465330:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:484987-485181:-1:exon

position:484987:-1
position: 484987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:477381-477426:-1:exon

position:477381:-1
position: 477381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477426:-1
position: 477426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:465924-465995:-1:exon

position:465924:-1
position: 465924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465995:-1
position: 465995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:464939-465330:-1:exon

position:465330:-1
position: 465330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110482295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110482295
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor ligand superfamily member 8
translation: MCQEQEQTLSQVKDSHESAMNVNEDTVSRRLGATNKVCLYFIIAILGVLLVFALATIMVLVVQRTEADPAMEGIKKPIRTGNTFEDYLKIQQSVPAKGAAAYMRVSRAVNSSKLSLVEKGTCEAMQCLSQELVIREQGLYLIFCHLNFLFPNCSKSPIDLKIELLVNDRVDRQTLSTLCASETCQDKTFKTLLQLHLTELKVEDRISVTLNHPEFLNDISLPNENILGVLKCSD
SIO_010081: LOC110482295
subclass of: SO_0000673
so part of: LOC110482295
location: complement(join(464939..465330,465924..465995,477381..477426,484987..485181))
location: region:464939-485181:-1
so has part: feature:484987-485181:-1:exon
so has part: feature:477381-477426:-1:exon
so has part: feature:465924-465995:-1:exon
so has part: feature:464939-465330:-1:exon

XP_021407133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:484987-485181:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:477381-477426:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:465924-465995:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:464939-465330:-1:exon

TNC
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TNC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(516551..590796)
location: region:516551-590796:-1
so has part: feature:516551-590796:-1:exon
subclass of: SO_0000010

110482254
type: Gene
SIO_000068: ncbigene

position:516551:-1
position: 516551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590796:-1
position: 590796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516551-590796:-1:exon

TNC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TNC
product: tenascin C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021551384.2
SIO_010081: TNC
subclass of: SO_0000673
so part of: TNC
location: complement(join(516551..517870,519065..519228,521310..521471,522800..522896,524325..524476,526435..526567,527503..527633,528709..528852,529380..529499,530699..530842,532015..532137,536353..536625,543977..544249,546172..546444,555710..555973,557087..557176,557928..558113,559379..559648,560226..560382,560463..560578,561566..561829,563122..564342,565255..565847,590544..590796))
location: region:516551-590796:-1
so has part: feature:590544-590796:-1:exon
so has part: feature:565255-565847:-1:exon
so has part: feature:563122-564342:-1:exon
so has part: feature:561566-561829:-1:exon
so has part: feature:560463-560578:-1:exon
so has part: feature:560226-560382:-1:exon
so has part: feature:559379-559648:-1:exon
so has part: feature:557928-558113:-1:exon
so has part: feature:557087-557176:-1:exon
so has part: feature:555710-555973:-1:exon
so has part: feature:546172-546444:-1:exon
so has part: feature:543977-544249:-1:exon
so has part: feature:536353-536625:-1:exon
so has part: feature:532015-532137:-1:exon
so has part: feature:530699-530842:-1:exon
so has part: feature:529380-529499:-1:exon
so has part: feature:528709-528852:-1:exon
so has part: feature:527503-527633:-1:exon
so has part: feature:526435-526567:-1:exon
so has part: feature:524325-524476:-1:exon
so has part: feature:522800-522896:-1:exon
so has part: feature:521310-521471:-1:exon
so has part: feature:519065-519228:-1:exon
so has part: feature:516551-517870:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:590544-590796:-1:exon

position:590544:-1
position: 590544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:565255-565847:-1:exon

position:565255:-1
position: 565255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565847:-1
position: 565847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:563122-564342:-1:exon

position:563122:-1
position: 563122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564342:-1
position: 564342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:561566-561829:-1:exon

position:561566:-1
position: 561566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:561829:-1
position: 561829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:560463-560578:-1:exon

position:560463:-1
position: 560463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560578:-1
position: 560578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:560226-560382:-1:exon

position:560226:-1
position: 560226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560382:-1
position: 560382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:559379-559648:-1:exon

position:559379:-1
position: 559379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559648:-1
position: 559648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:557928-558113:-1:exon

position:557928:-1
position: 557928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558113:-1
position: 558113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:557087-557176:-1:exon

position:557087:-1
position: 557087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:557176:-1
position: 557176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:555710-555973:-1:exon

position:555710:-1
position: 555710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555973:-1
position: 555973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:546172-546444:-1:exon

position:546172:-1
position: 546172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546444:-1
position: 546444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:543977-544249:-1:exon

position:543977:-1
position: 543977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544249:-1
position: 544249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:536353-536625:-1:exon

position:536353:-1
position: 536353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536625:-1
position: 536625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:532015-532137:-1:exon

position:532015:-1
position: 532015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532137:-1
position: 532137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:530699-530842:-1:exon

position:530699:-1
position: 530699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530842:-1
position: 530842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:529380-529499:-1:exon

position:529380:-1
position: 529380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529499:-1
position: 529499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:528709-528852:-1:exon

position:528709:-1
position: 528709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528852:-1
position: 528852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:527503-527633:-1:exon

position:527503:-1
position: 527503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527633:-1
position: 527633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:526435-526567:-1:exon

position:526435:-1
position: 526435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526567:-1
position: 526567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:524325-524476:-1:exon

position:524325:-1
position: 524325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524476:-1
position: 524476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:522800-522896:-1:exon

position:522800:-1
position: 522800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522896:-1
position: 522896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:521310-521471:-1:exon

position:521310:-1
position: 521310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521471:-1
position: 521471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:519065-519228:-1:exon

position:519065:-1
position: 519065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519228:-1
position: 519228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:516551-517870:-1:exon

position:517870:-1
position: 517870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TNC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TNC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tenascin
translation: MGLPSQVLACAILALLSQHVTGGLIKRIIRQKREAGLNVTLPEDNQPVVFNHVYNIKLPVGSLCSVDLDTASGDADLKAEIEPVKNYGEHTVNEGNQIVFTHRINIPRRACGCAAAPDIKDLLSRLEELEGLVSSLREQCASGAGCCPNSQAAEGRLDTTPYCSGHGNYSIEICGCVCEPGWKGPNCSQASCPSDCNDQGKCVDGLCVCFEGYTGPDCGQELCAQGCGAHGRCVGGQCLCHEGFVGDDCSVPLCPHNCHGRGRCVDSECVCEEGYTGEDCSELICPNDCFDRGRCVNGTCFCEEGFAGEDCGELTCPNDCHGNGRCENGLCVCHEGFVGDDCSERRCPNDCHNRGRCVGGRCVCHEGYLGEDCAELRCPNDCNNRGRCENGQCVCHEGFIGEDCGELRCPNDCHHRGRCENGQCVCHEGFTGDDCGQLRCPSDCHNRGLCVNGQCVCDEGYTGEDCAELRCPNDCHNRGRCVEGRCECDNGFTGDDCGELACPNSCHGRGRCENGRCVCHEGFVGEDCRERSCPNNCNNAGRCVDGRCVCEDGYIGDDCSDVSPPTELTVTNVTDKTVNLEWKHENLVNEYLITYVPTSSGGLDMQFTVPGNHTAATIHELEPGVEYFIRVFAILKNKKSIPVSARVATYLPAPEGLRFKSVRETSVQVEWDPLNFSFDGWELVFHNMKKDDNGDITSSLKRPETSYMQPGLAPGQQYNVSIHIVKNNTRGPGLSKVITTKLDAPSQVEAKDVTDTTALITWSKPLAEVEGVELTYGPKDIPGDRTTIDLSEDENQYSIGNLRPHTEYEVTLVSRRGDMESDPVKEVFVTDLDAPRNLKRVSQTDSSITLEWKNSHANVDNYRIKFAPISGGDHVEITVPKGNQATTRATLTGLRPGTEYGIGVTAVRNDRESAPATINAGTDLDNPKDLEVSEPTETTLSLRWRRPVAKFDHYRLVSTSPSGKKSEVEIPVDSTSFLLRGLEPGTEYTISLLAEKGRHKSKPTTVKGSTEEEPELGELSVSEPGWDGFQLTWTAADGAYENFVLQVQEPGKPEETRNVTVPGTLSSVNVTGLKANTPYTITLQGVTGGYRSKPLSLETATGEQPGVAELTVSNITPESFNLSWTASNGDFDAFTIEIIDSNRLLEPMEFNLSGNSRTAHISGLSPSTDFIVYLSGISRGFRTQAISAAATTEAEPEVDNLLVSDATPDGFRLSWTADDGVFNSFVLKIRDTKRKSDPLELIVPGHERTQDITGLKEGTEYEIELYGIGSGQRSQPVNTVASTAVGSPKGISFSDITENAATVSWTPPRSRVENFRISYVPVTGGTPNVVTVEGSKTRTKLVKLVPGVDYNVSVISVKGFEESEPVSGILKTALDSPSGLVVVNITDSEALATWQPAIAAVDNYVVSYSSEKEAEVTQLVSGNTVEYDLKGLQPATEYTLSVHAQKDAQSSETLSTHFTTGLDAPRDLSTTEVQSEAAVISWRPPRAPVTGYLLIYESIDGRVKEVILNPETTSYSLTELSPSTQYTVKLQALSGALRSKTIQTIFTTTGLLYPYPKDCSQALLNGEATSGLYTIYLNGDKAQPLQVFCDMGEDGGGWIVFLRRQNGKQDFYKNWNSYVAGFGDPKDEFWIGLENLHKITSQGQYELRVDLRDKGDTAYAVYDRFSVGDAKSRYRLRVDGYSGTAGDSMTYHNGRSFSTFDKDHDSAITNCALSYKGAFWYKNCHRVNLMGRYGDNSHSQGVNWFHWKGHEYSIQFAEMKLRPSSFRNLEGRRKRA
SIO_010081: TNC
subclass of: SO_0000673
so part of: TNC
location: complement(join(517760..517870,519065..519228,521310..521471,522800..522896,524325..524476,526435..526567,527503..527633,528709..528852,529380..529499,530699..530842,532015..532137,536353..536625,543977..544249,546172..546444,555710..555973,557087..557176,557928..558113,559379..559648,560226..560382,560463..560578,561566..561829,563122..564342,565255..565717))
location: region:517760-565717:-1
so has part: feature:565255-565717:-1:exon
so has part: feature:563122-564342:-1:exon
so has part: feature:561566-561829:-1:exon
so has part: feature:560463-560578:-1:exon
so has part: feature:560226-560382:-1:exon
so has part: feature:559379-559648:-1:exon
so has part: feature:557928-558113:-1:exon
so has part: feature:557087-557176:-1:exon
so has part: feature:555710-555973:-1:exon
so has part: feature:546172-546444:-1:exon
so has part: feature:543977-544249:-1:exon
so has part: feature:536353-536625:-1:exon
so has part: feature:532015-532137:-1:exon
so has part: feature:530699-530842:-1:exon
so has part: feature:529380-529499:-1:exon
so has part: feature:528709-528852:-1:exon
so has part: feature:527503-527633:-1:exon
so has part: feature:526435-526567:-1:exon
so has part: feature:524325-524476:-1:exon
so has part: feature:522800-522896:-1:exon
so has part: feature:521310-521471:-1:exon
so has part: feature:519065-519228:-1:exon
so has part: feature:517760-517870:-1:exon

XP_021407059.1
type: Protein
SIO_000068: ncbiprotein

position:517760:-1
position: 517760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565717:-1
position: 565717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565255-565717:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:563122-564342:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:561566-561829:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560463-560578:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:560226-560382:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:559379-559648:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:557928-558113:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:557087-557176:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:555710-555973:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:546172-546444:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:543977-544249:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:536353-536625:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:532015-532137:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:530699-530842:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:529380-529499:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:528709-528852:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:527503-527633:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:526435-526567:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:524325-524476:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:522800-522896:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:521310-521471:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:519065-519228:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:517760-517870:-1:exon

PAPPA
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: PAPPA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 973367..1148041
location: region:973367-1148041:1
so has part: feature:973367-1148041:1:exon
subclass of: SO_0000010

110482276
type: Gene
SIO_000068: ncbigene

position:973367:1
position: 973367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1148041:1
position: 1148041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:973367-1148041:1:exon

PAPPA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PAPPA
product: pappalysin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 10 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021551415.2
SIO_010081: PAPPA
subclass of: SO_0000673
so part of: PAPPA
location: join(973367..974029,999546..1000614,1025110..1025255,1029767..1030060,1033942..1034134,1040206..1040327,1045765..1046272,1063970..1064098,1065676..1065767,1078186..1078382,1095742..1095855,1096257..1096392,1099916..1100129,1109452..1109623,1116115..1116298,1118923..1119133,1119731..1119902,1123270..1123417,1125963..1126072,1132547..1132618,1136817..1136915,1147720..1148041)
location: region:973367-1148041:1
so has part: feature:973367-974029:1:exon
so has part: feature:999546-1000614:1:exon
so has part: feature:1025110-1025255:1:exon
so has part: feature:1029767-1030060:1:exon
so has part: feature:1033942-1034134:1:exon
so has part: feature:1040206-1040327:1:exon
so has part: feature:1045765-1046272:1:exon
so has part: feature:1063970-1064098:1:exon
so has part: feature:1065676-1065767:1:exon
so has part: feature:1078186-1078382:1:exon
so has part: feature:1095742-1095855:1:exon
so has part: feature:1096257-1096392:1:exon
so has part: feature:1099916-1100129:1:exon
so has part: feature:1109452-1109623:1:exon
so has part: feature:1116115-1116298:1:exon
so has part: feature:1118923-1119133:1:exon
so has part: feature:1119731-1119902:1:exon
so has part: feature:1123270-1123417:1:exon
so has part: feature:1125963-1126072:1:exon
so has part: feature:1132547-1132618:1:exon
so has part: feature:1136817-1136915:1:exon
so has part: feature:1147720-1148041:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:973367-974029:1:exon

position:974029:1
position: 974029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:999546-1000614:1:exon

position:999546:1
position: 999546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1000614:1
position: 1000614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1025110-1025255:1:exon

position:1025110:1
position: 1025110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1025255:1
position: 1025255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1029767-1030060:1:exon

position:1029767:1
position: 1029767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1030060:1
position: 1030060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1033942-1034134:1:exon

position:1033942:1
position: 1033942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1034134:1
position: 1034134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1040206-1040327:1:exon

position:1040206:1
position: 1040206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040327:1
position: 1040327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1045765-1046272:1:exon

position:1045765:1
position: 1045765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046272:1
position: 1046272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1063970-1064098:1:exon

position:1063970:1
position: 1063970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1064098:1
position: 1064098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1065676-1065767:1:exon

position:1065676:1
position: 1065676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1065767:1
position: 1065767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1078186-1078382:1:exon

position:1078186:1
position: 1078186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1078382:1
position: 1078382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1095742-1095855:1:exon

position:1095742:1
position: 1095742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1095855:1
position: 1095855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1096257-1096392:1:exon

position:1096257:1
position: 1096257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1096392:1
position: 1096392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1099916-1100129:1:exon

position:1099916:1
position: 1099916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1100129:1
position: 1100129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1109452-1109623:1:exon

position:1109452:1
position: 1109452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1109623:1
position: 1109623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1116115-1116298:1:exon

position:1116115:1
position: 1116115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1116298:1
position: 1116298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1118923-1119133:1:exon

position:1118923:1
position: 1118923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1119133:1
position: 1119133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1119731-1119902:1:exon

position:1119731:1
position: 1119731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1119902:1
position: 1119902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1123270-1123417:1:exon

position:1123270:1
position: 1123270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1123417:1
position: 1123417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1125963-1126072:1:exon

position:1125963:1
position: 1125963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1126072:1
position: 1126072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1132547-1132618:1:exon

position:1132547:1
position: 1132547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1132618:1
position: 1132618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1136817-1136915:1:exon

position:1136817:1
position: 1136817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1136915:1
position: 1136915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1147720-1148041:1:exon

position:1147720:1
position: 1147720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PAPPA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PAPPA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pappalysin-1
translation: MQLWSLLLPLALLCTALASGPECGMDERSRRARRDTRHSRQLLHTAPGTCATRLARGRRSTAGLEPGHVPRRRQQREVKDEEESLTPSRALYFSGQGDQLRLKADVELPRDAFTLQVWLKAEGGQRSPAVIAGLYDKCSYTSRDRGWVLGINTVSDQGNRDPRYFFSLKTDRARKVTTIAAHRSYLPNQWVHLAATYDGRLMRLYVNGAQVATSGEQVGSIFSLLTLKCKVLMLGGNALNQNYRGYMEHFSLWRTARSQKEILLDMEQAIQRQDTPLPQLVLQDSLLNVKSAWSPMKDGSSPQTKFNYHHGYLLDTSLDPPLCGQTVCDNTDVIASYNKLPRFRRNKTVRYRVVNLYDDKHQNPTVSQQQIEFQHQHLNEAFSRYNITWELEVLDVKNSSLRHRLILANCDISKIGDENCDPECNHTLTGYDGGDCRHVRHTLFNKKKQNGVCDMDCNYERYNFDGGECCNPEITEVTKTCFDPYSPYRAYLDVNELKNILKLDGSTHLNIFFANSSEEELAGVATWPWDKEALMHLGGIVLNPSFYGIPGHTHTMIHEIGHSLGLYHVFRGISEILSCSDPCMETEPSFETGDLCSDTNPAPKHKLCGDPGPGNDTCGFHSFLNTPFSNFMSYADDDCTDSFTPNQVARMHCYLDLVYQSWQPTKKPAPVAIAPQIVARTSTSVTLEWFPPIDGHFFEREVGSACDLCAEGRVLVQYAFSASSPMPCDPSGHWSPREAEGHPDVEQPCKSSVRTWSPNSAVNQHTVPPACPEPQGCYLQLEFRYPLTPESLTVWVTFVSPDWDSSGAVNDIKLLTVSGKNISLGPQNVFCDIPLTIKLDVGQVGEEVYGIQIYTLDEHLEIDAAMLSSVPHSTLCSGCKPIQYKVVRDPPFQSGSAVVISNLSRRFVDTELSDRTTYRYQVVIVSGMEESEPSPALVYVSGSGYCGDGIIQIELGEECDDMNKINGDGCSLFCLQELSFNCIDEPSRCYFHDGDGVCEEFEQMTSIKDCGVYTPKGFLDQWASNVSVSHHSDQQCPGWVVIGQPAATQMCRTKVIDLNDGVSQYAWYPCTANFQYSHMTQTIFWLKAYFSQPMVAAAVLVHLVTDGTYYLDQKQETIGVQLFDTKEQSHDLGVHVLSCRNNPLIIPVIHDLSHPFYHTQAVLISFSSQFVAISGVALRSFHNFDPITISSCQQGQTYSPAEQSCVHYSCEATDCQRLEIENAVLNCTGGTGWDSGAQCNVSCRTGYILQIHRDDDLVKSQTESSVTMTCMDGKWNKQVTCEPVDCGVPDQYHVYPATFNCSEGTTFGKKCSFTCRPPALLKGNNSNLTCMEDGLWSFPEALCELMCRAPSIVPNADLQTSRCREDKHKVGSFCKYKCKPGYHVPGSSRKSRKRAFKIQCTQDGTWLPGACVPVTCDPPPSKFHGLYQCSNGFQFNSECRIKCEDDDSQSGRGSNVIHCRKDGTWSGSFHLCREMQGQCALPTQLNSHLKLQCTGGYGIGTECTTSCLDHSHEPILLRVNETVQDIQHWMNPQRVKSVVCTAGLKWYPHPSLIHCVKGCEPFMGDNYCDSINNRAFCNYDGGDCCASTVKTKKVTPFPMSCDLQGECACRDPNAQEHNQKDLRGFSLG
SIO_010081: PAPPA
subclass of: SO_0000673
so part of: PAPPA
location: join(973633..974029,999546..1000614,1025110..1025255,1029767..1030060,1033942..1034134,1040206..1040327,1045765..1046272,1063970..1064098,1065676..1065767,1078186..1078382,1095742..1095855,1096257..1096392,1099916..1100129,1109452..1109623,1116115..1116298,1118923..1119133,1119731..1119902,1123270..1123417,1125963..1126072,1132547..1132618,1136817..1136915,1147720..1147827)
location: region:973633-1147827:1
so has part: feature:973633-974029:1:exon
so has part: feature:999546-1000614:1:exon
so has part: feature:1025110-1025255:1:exon
so has part: feature:1029767-1030060:1:exon
so has part: feature:1033942-1034134:1:exon
so has part: feature:1040206-1040327:1:exon
so has part: feature:1045765-1046272:1:exon
so has part: feature:1063970-1064098:1:exon
so has part: feature:1065676-1065767:1:exon
so has part: feature:1078186-1078382:1:exon
so has part: feature:1095742-1095855:1:exon
so has part: feature:1096257-1096392:1:exon
so has part: feature:1099916-1100129:1:exon
so has part: feature:1109452-1109623:1:exon
so has part: feature:1116115-1116298:1:exon
so has part: feature:1118923-1119133:1:exon
so has part: feature:1119731-1119902:1:exon
so has part: feature:1123270-1123417:1:exon
so has part: feature:1125963-1126072:1:exon
so has part: feature:1132547-1132618:1:exon
so has part: feature:1136817-1136915:1:exon
so has part: feature:1147720-1147827:1:exon

XP_021407090.1
type: Protein
SIO_000068: ncbiprotein

position:973633:1
position: 973633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1147827:1
position: 1147827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:973633-974029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:999546-1000614:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1025110-1025255:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1029767-1030060:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1033942-1034134:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1040206-1040327:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1045765-1046272:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1063970-1064098:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1065676-1065767:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1078186-1078382:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1095742-1095855:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1096257-1096392:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1099916-1100129:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1109452-1109623:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1116115-1116298:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1118923-1119133:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1119731-1119902:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1123270-1123417:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1125963-1126072:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1132547-1132618:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1136817-1136915:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1147720-1147827:1:exon

ASTN2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: ASTN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1161915..1496706)
location: region:1161915-1496706:-1
so has part: feature:1161915-1496706:-1:exon
subclass of: SO_0000010

110482255
type: Gene
SIO_000068: ncbigene

position:1161915:-1
position: 1161915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1496706:-1
position: 1496706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1161915-1496706:-1:exon

ASTN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ASTN2
product: astrotactin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021551387.1
SIO_010081: ASTN2
subclass of: SO_0000673
so part of: ASTN2
location: complement(join(1161915..1162222,1167954..1168137,1169313..1169413,1191471..1191612,1241689..1241837,1242941..1243074,1254667..1254932,1276572..1276751,1278188..1278292,1278662..1278786,1296823..1297011,1300282..1300448,1313306..1313456,1346093..1346230,1346685..1346759,1346884..1346968,1355956..1356123,1368347..1368493,1382764..1382871,1391679..1391828,1408763..1409147,1439441..1439628,1496373..1496706))
location: region:1161915-1496706:-1
so has part: feature:1496373-1496706:-1:exon
so has part: feature:1439441-1439628:-1:exon
so has part: feature:1408763-1409147:-1:exon
so has part: feature:1391679-1391828:-1:exon
so has part: feature:1382764-1382871:-1:exon
so has part: feature:1368347-1368493:-1:exon
so has part: feature:1355956-1356123:-1:exon
so has part: feature:1346884-1346968:-1:exon
so has part: feature:1346685-1346759:-1:exon
so has part: feature:1346093-1346230:-1:exon
so has part: feature:1313306-1313456:-1:exon
so has part: feature:1300282-1300448:-1:exon
so has part: feature:1296823-1297011:-1:exon
so has part: feature:1278662-1278786:-1:exon
so has part: feature:1278188-1278292:-1:exon
so has part: feature:1276572-1276751:-1:exon
so has part: feature:1254667-1254932:-1:exon
so has part: feature:1242941-1243074:-1:exon
so has part: feature:1241689-1241837:-1:exon
so has part: feature:1191471-1191612:-1:exon
so has part: feature:1169313-1169413:-1:exon
so has part: feature:1167954-1168137:-1:exon
so has part: feature:1161915-1162222:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1496373-1496706:-1:exon

position:1496373:-1
position: 1496373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1439441-1439628:-1:exon

position:1439441:-1
position: 1439441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1439628:-1
position: 1439628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1408763-1409147:-1:exon

position:1408763:-1
position: 1408763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1409147:-1
position: 1409147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1391679-1391828:-1:exon

position:1391679:-1
position: 1391679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1391828:-1
position: 1391828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1382764-1382871:-1:exon

position:1382764:-1
position: 1382764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1382871:-1
position: 1382871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1368347-1368493:-1:exon

position:1368347:-1
position: 1368347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1368493:-1
position: 1368493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1355956-1356123:-1:exon

position:1355956:-1
position: 1355956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1356123:-1
position: 1356123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1346884-1346968:-1:exon

position:1346884:-1
position: 1346884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1346968:-1
position: 1346968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1346685-1346759:-1:exon

position:1346685:-1
position: 1346685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1346759:-1
position: 1346759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1346093-1346230:-1:exon

position:1346093:-1
position: 1346093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1346230:-1
position: 1346230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1313306-1313456:-1:exon

position:1313306:-1
position: 1313306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1313456:-1
position: 1313456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1300282-1300448:-1:exon

position:1300282:-1
position: 1300282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1300448:-1
position: 1300448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1296823-1297011:-1:exon

position:1296823:-1
position: 1296823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1297011:-1
position: 1297011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1278662-1278786:-1:exon

position:1278662:-1
position: 1278662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1278786:-1
position: 1278786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1278188-1278292:-1:exon

position:1278188:-1
position: 1278188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1278292:-1
position: 1278292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1276572-1276751:-1:exon

position:1276572:-1
position: 1276572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1276751:-1
position: 1276751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1254667-1254932:-1:exon

position:1254667:-1
position: 1254667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1254932:-1
position: 1254932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1242941-1243074:-1:exon

position:1242941:-1
position: 1242941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1243074:-1
position: 1243074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1241689-1241837:-1:exon

position:1241689:-1
position: 1241689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1241837:-1
position: 1241837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1191471-1191612:-1:exon

position:1191471:-1
position: 1191471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1191612:-1
position: 1191612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1169313-1169413:-1:exon

position:1169313:-1
position: 1169313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1169413:-1
position: 1169413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1167954-1168137:-1:exon

position:1167954:-1
position: 1167954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1168137:-1
position: 1168137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1161915-1162222:-1:exon

position:1162222:-1
position: 1162222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ASTN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ASTN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: astrotactin-2
translation: MAAPPRRRAAAPPPVLPPVLLLLLLPPPAVLLGGGPGAAASREPPGPCRVKTVTVSTLPVLRENDISWSGAPPPAAASAESRLLLFVRSELPGRVAVQDDLDNTELPFFTLEMSGTVSDISLVHWKQQWLENGTLYFHVSMSSAEQLSRATPPSLQEPSEIVEEQMHILHISVMGGLIALLLLLLVFMVALYAQRRWHKRRRIPQKSASTEATHEIHYIPSVLLGPQARESFRNSRLQAHNSVIGVPIRETPILDDYEDEEEEETPRRAEPSAREDEFGSQVTRTLESLGRGGEEKPDYEKKAAEVTQETVESLMQKFKESFRTNTPIEIGQLQPALRSTSVGRRKRRSRPRGGIGFGRAKGNSGSEADDETQLTFYTEQYRSRRRSKGSTKSPVNKTALTLIAVSSCVLAVVCGSQLSCPLTVKVTLHVPEHFIADGSSFVVSEGSYLDISDWLNPAKLSLYYQINATSPWVRDLCGQRTTDACEQLCDQDTGECSCHEGYAPDPVHRHLCVRSDWGHSEGPWPYTTLERGYDLVTGEQAPEKILRSTYSLGQGLWLPVSKSFVVPPVELSINPLASCKTDVLVTEDPADVREEAMLSTYFETINDLLSSFGPVRDCSRNNGGCTRNFKCVSDRKVDSTGCVCPEELRPMKDGTGCYDYSKGIDCSDGFNGGCEQLCLQQTLPLPHDPSSSTIFMFCGCVEEYKLAPDGKSCLMLSDICEGPKCLKSEAKFNDTLFGEMLHGYNNRSQHVNQGQVFQMTFRENNFIKDFPQLADGLLVIPLPVEEQCRGVLSEPLPDLQLLTGDIKYDEAMGYPMVQHWRVRSNLYRVKLSSITLSAGFANILKILNKDSSREELLSFIQQFGSHYIAEALYGSEFSCTIHFPSKKVQQQLWLQYQKETTELGNKKELKSMPFITYLSGLLTAQMLSDDHLISGVEIHCEEKGRCPSTCHLCRRPGKEQLSPTPVLLEINRVVPLYALIQDNDTREAFKGALMSSYWCSGKGDVIEDWCRCDLNAFDENGLPNCSPLPPPVLRLSPSVEPSSTVVSLEWLDVQPAIGTKVSDYVLQHKKVDEYTDTDLYTGESLSFADDLLSGLATSCVAAGRSHGDVPETSLYSVIFKCLEPDGLYKFTLYAVDTRGRHSELSTVTLRTACPLVDDSKAEEIADKIYNLYNGYTSGKEQQTAYNTLMEVSASMLFRVQHHYNSHYEKFGDFVWRSEDELGPRKAHLILRRLEKVSSHCSTLLRSAYIQSRTETMPYLFCRSEEVRPPGMVWYSILKDTKVTCEEKMVSMLRNTYGESKGR
SIO_010081: ASTN2
subclass of: SO_0000673
so part of: ASTN2
location: complement(join(1161985..1162222,1167954..1168137,1169313..1169413,1191471..1191612,1241689..1241837,1242941..1243074,1254667..1254932,1276572..1276751,1278188..1278292,1278662..1278786,1296823..1297011,1300282..1300448,1313306..1313456,1346093..1346230,1346685..1346759,1346884..1346968,1355956..1356123,1368347..1368493,1382764..1382871,1391679..1391828,1408763..1409147,1439441..1439628,1496373..1496706))
location: region:1161985-1496706:-1
so has part: feature:1496373-1496706:-1:exon
so has part: feature:1439441-1439628:-1:exon
so has part: feature:1408763-1409147:-1:exon
so has part: feature:1391679-1391828:-1:exon
so has part: feature:1382764-1382871:-1:exon
so has part: feature:1368347-1368493:-1:exon
so has part: feature:1355956-1356123:-1:exon
so has part: feature:1346884-1346968:-1:exon
so has part: feature:1346685-1346759:-1:exon
so has part: feature:1346093-1346230:-1:exon
so has part: feature:1313306-1313456:-1:exon
so has part: feature:1300282-1300448:-1:exon
so has part: feature:1296823-1297011:-1:exon
so has part: feature:1278662-1278786:-1:exon
so has part: feature:1278188-1278292:-1:exon
so has part: feature:1276572-1276751:-1:exon
so has part: feature:1254667-1254932:-1:exon
so has part: feature:1242941-1243074:-1:exon
so has part: feature:1241689-1241837:-1:exon
so has part: feature:1191471-1191612:-1:exon
so has part: feature:1169313-1169413:-1:exon
so has part: feature:1167954-1168137:-1:exon
so has part: feature:1161985-1162222:-1:exon

XP_021407062.1
type: Protein
SIO_000068: ncbiprotein

position:1161985:-1
position: 1161985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1496373-1496706:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1439441-1439628:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1408763-1409147:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1391679-1391828:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1382764-1382871:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1368347-1368493:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1355956-1356123:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1346884-1346968:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1346685-1346759:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1346093-1346230:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1313306-1313456:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1300282-1300448:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1296823-1297011:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1278662-1278786:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1278188-1278292:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1276572-1276751:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1254667-1254932:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1242941-1243074:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1241689-1241837:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1191471-1191612:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1169313-1169413:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1167954-1168137:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1161985-1162222:-1:exon

TRIM32
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TRIM32
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1263179..1270458
location: region:1263179-1270458:1
so has part: feature:1263179-1270458:1:exon
subclass of: SO_0000010

110482299
type: Gene
SIO_000068: ncbigene

position:1263179:1
position: 1263179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1270458:1
position: 1270458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1263179-1270458:1:exon

TRIM32
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TRIM32
product: tripartite motif containing 32
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021551463.2
SIO_010081: TRIM32
subclass of: SO_0000673
so part of: TRIM32
location: join(1263179..1263219,1266116..1270458)
location: region:1263179-1270458:1
so has part: feature:1263179-1263219:1:exon
so has part: feature:1266116-1270458:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1263179-1263219:1:exon

position:1263219:1
position: 1263219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1266116-1270458:1:exon

position:1266116:1
position: 1266116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRIM32
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TRIM32
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM32
translation: MAAAPYLNSDALREVLECPICMESFTEEHMRPKLLHCGHTICKQCLEKLLANSINGIRCPFCSKITRITSLAQLTDNLTVLKIIDTAGLGEVVGLLMCKVCGRRLPRHFCKSCSLVLCEPCKEASHMPPGHRVMAIKEAAEERRREFGTRLARLRELMGDLQKRKAALEDVSRDLQSRYKAVLQEYSKEERKIQEELARSRKFFTTSLTEVEKINNQVMEEQAYLLNLAEVQIMSRCDYFLAKIKQGDITLLEEAADEEEPELTNSLPRELTLQEVELLKVSHVGPLQIGQVVKKPRTVNVEESLMENAASPFVPFREPDLVQEEPSCTPHSSPAKPRMPEAATSIQQCSFIKRMGSKGSLPGMFNLPVSLHVTSQGEVLVADRGNFRIQVFTRKGFLKEIRRSPSGIDSFVLSFLGADLPNLTPLSVTMNCHGLIGVTDSYDNSVKVYTMDGHCVACHRSQLSKPWGIAALPSGQFVVTDVEGGKLWCFTVDRGMGVVKYSCLCSAVRPKFVTCDAEGTIYFTQGLGLNLENRQYEHHLEGGFSIGSVGPDGQLGRQISHFFSENEDFRCIAGMCVDSRGDLIVADSSRKEILHFPKGGGYNILIREGLTCPVGIAVTPKGQLLVLDCWDHCIKIYSYHLRRYSTP
SIO_010081: TRIM32
subclass of: SO_0000673
so part of: TRIM32
location: 1266183..1268126
location: region:1266183-1268126:1
so has part: feature:1266183-1268126:1:exon

XP_021407138.1
type: Protein
SIO_000068: ncbiprotein

position:1266183:1
position: 1266183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1268126:1
position: 1268126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1266183-1268126:1:exon

LOC116184234
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116184234
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1535339..1536923
location: region:1535339-1536923:1
so has part: feature:1535339-1536923:1:exon
subclass of: SO_0000011

116184234
type: Gene
SIO_000068: ncbigene

position:1535339:1
position: 1535339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1536923:1
position: 1536923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1535339-1536923:1:exon

LOC116184234
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC116184234
product: uncharacterized LOC116184234
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004148994.1
SIO_010081: LOC116184234
subclass of: SO_0000673
so part of: LOC116184234
location: join(1535339..1535407,1536689..1536923)
location: region:1535339-1536923:1
so has part: feature:1535339-1535407:1:exon
so has part: feature:1536689-1536923:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1535339-1535407:1:exon

position:1535407:1
position: 1535407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1536689-1536923:1:exon

position:1536689:1
position: 1536689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TLR4
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TLR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1594136..1600364
location: region:1594136-1600364:1
so has part: feature:1594136-1600364:1:exon
subclass of: SO_0000010

110482234
type: Gene
SIO_000068: ncbigene

position:1594136:1
position: 1594136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1600364:1
position: 1600364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1594136-1600364:1:exon

TLR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TLR4
product: toll like receptor 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 45 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021551352.2
SIO_010081: TLR4
subclass of: SO_0000673
so part of: TLR4
location: join(1594136..1594445,1595857..1596023,1597338..1600364)
location: region:1594136-1600364:1
so has part: feature:1594136-1594445:1:exon
so has part: feature:1595857-1596023:1:exon
so has part: feature:1597338-1600364:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1594136-1594445:1:exon

position:1594445:1
position: 1594445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1595857-1596023:1:exon

position:1595857:1
position: 1595857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1596023:1
position: 1596023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1597338-1600364:1:exon

position:1597338:1
position: 1597338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TLR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TLR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: toll-like receptor 4
translation: MLLSPATPGLLKMPRRGALPVGTLLVLLQLAFVPSPLAGCLLDPCLEITPNTTFRCTGLNISGVPDGVPNTTQNLDLSFSNLKSLGSNYFASVPELQILDLSRCHLHTIEDNSFMDLPRLSTLVLTANSFQHLGKAAFYGLTSLKKLVLVETNRTSLSELPIGHLHTLQELNLGHNSITSLKLPKYFTNMTSLRHLSFSSNKITSISRGDLDALRGGNRLNLTLVLSLNNIKSIEPGAFAGIHLAELALRSAFEKSTMQTALQGLAGLQVSRLIVGEFRNIERLQDFEGRLLDGLCQVQMEEFVLICLRGIEDDTDTLFNCVGNVSTIRLVDLGLEEISQVPLWSKVRQLECKKCDFEDMPAQKLSLFKELRVLRITENKSLKTFEQKFVGLSNLEVIDLSENRLTFSSCCSRQFQNCPNLKHLNLSFNSNIRLTGDFTNVKNLLYLDLQHTTLFGPGSYPVFLSLQRLIYLDISYTKTEVKSQCTFCGLNSLQVLKMAGNSFADNKLANNFKNLSHLHTLDISSCKLEHVDQSTFDALSELKELNISNNKLLTFDPVVYQPLQALRVLDFSRNQLTVLLDPAREILPDSLVLLDISQNLFDCSCVYLDFLKWVKEKQELLQNEELMLCHTPSYVANVSLPSFDLSSCHISAGQVASPVVVLLCVVVLLFLVYKYYFQLYYSMVLLSGCKHYAERGDTYDAFVIHSSKDQEWVTKELVEPLEGGTPRFRLCLYYRDFLPGVPIVTNIIEEGFLSSRNVIAVISADFLQSKWCSFEFDIAQSWQLVEGKAGLIMIVLEDVNKALLRQKLGLSRYLRRNTYLEWKNKEIRKHIFWRQLTGVLLEGKNWNHEEAKLM
SIO_010081: TLR4
subclass of: SO_0000673
so part of: TLR4
location: join(1594305..1594445,1595857..1596023,1597338..1599594)
location: region:1594305-1599594:1
so has part: feature:1594305-1594445:1:exon
so has part: feature:1595857-1596023:1:exon
so has part: feature:1597338-1599594:1:exon

XP_021407027.1
type: Protein
SIO_000068: ncbiprotein

position:1594305:1
position: 1594305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1599594:1
position: 1599594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1594305-1594445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1595857-1596023:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1597338-1599594:1:exon

LOC116184223
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116184223
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1629504..1632350
location: region:1629504-1632350:1
so has part: feature:1629504-1632350:1:exon
subclass of: SO_0000011

116184223
type: Gene
SIO_000068: ncbigene

position:1629504:1
position: 1629504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1632350:1
position: 1632350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1629504-1632350:1:exon

LOC116184223
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC116184223
product: uncharacterized LOC116184223
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004148981.1
SIO_010081: LOC116184223
subclass of: SO_0000673
so part of: LOC116184223
location: join(1629504..1629795,1632067..1632350)
location: region:1629504-1632350:1
so has part: feature:1629504-1629795:1:exon
so has part: feature:1632067-1632350:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1629504-1629795:1:exon

position:1629795:1
position: 1629795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1632067-1632350:1:exon

position:1632067:1
position: 1632067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116184221
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116184221
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1839406..1847849)
location: region:1839406-1847849:-1
so has part: feature:1839406-1847849:-1:exon
subclass of: SO_0000011

116184221
type: Gene
SIO_000068: ncbigene

position:1839406:-1
position: 1839406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1847849:-1
position: 1847849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1839406-1847849:-1:exon

LOC116184221
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC116184221
product: uncharacterized LOC116184221, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004148979.1
SIO_010081: LOC116184221
subclass of: SO_0000673
so part of: LOC116184221
location: complement(join(1839406..1839548,1845878..1846003,1847787..1847849))
location: region:1839406-1847849:-1
so has part: feature:1847787-1847849:-1:exon
so has part: feature:1845878-1846003:-1:exon
so has part: feature:1839406-1839548:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1847787-1847849:-1:exon

position:1847787:-1
position: 1847787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1845878-1846003:-1:exon

position:1845878:-1
position: 1845878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1846003:-1
position: 1846003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1839406-1839548:-1:exon

position:1839548:-1
position: 1839548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116184221
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC116184221
product: uncharacterized LOC116184221, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004148978.1
SIO_010081: LOC116184221
subclass of: SO_0000673
so part of: LOC116184221
location: complement(join(1839406..1839548,1845878..1846020,1847787..1847847))
location: region:1839406-1847847:-1
so has part: feature:1847787-1847847:-1:exon
so has part: feature:1845878-1846020:-1:exon
so has part: feature:1839406-1839548:-1:exon

position:1847847:-1
position: 1847847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1847787-1847847:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1845878-1846020:-1:exon

position:1846020:-1
position: 1846020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1839406-1839548:-1:exon

LOC116184218
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116184218
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1961368..1963514
location: region:1961368-1963514:1
so has part: feature:1961368-1963514:1:exon
subclass of: SO_0000011

116184218
type: Gene
SIO_000068: ncbigene

position:1961368:1
position: 1961368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1963514:1
position: 1963514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1961368-1963514:1:exon

LOC116184218
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC116184218
product: uncharacterized LOC116184218
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004148973.1
SIO_010081: LOC116184218
subclass of: SO_0000673
so part of: LOC116184218
location: join(1961368..1961397,1962954..1963514)
location: region:1961368-1963514:1
so has part: feature:1961368-1961397:1:exon
so has part: feature:1962954-1963514:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1961368-1961397:1:exon

position:1961397:1
position: 1961397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1962954-1963514:1:exon

position:1962954:1
position: 1962954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BRINP1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: BRINP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2071984..2164297)
location: region:2071984-2164297:-1
so has part: feature:2071984-2164297:-1:exon
subclass of: SO_0000010

110482252
type: Gene
SIO_000068: ncbigene

position:2071984:-1
position: 2071984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2164297:-1
position: 2164297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2071984-2164297:-1:exon

BRINP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: BRINP1
product: BMP/retinoic acid inducible neural specific 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 11 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021551379.2
SIO_010081: BRINP1
subclass of: SO_0000673
so part of: BRINP1
location: complement(join(2071984..2073180,2079123..2079345,2084944..2085180,2091785..2091890,2093124..2093293,2099043..2099233,2133269..2133536,2163896..2164297))
location: region:2071984-2164297:-1
so has part: feature:2163896-2164297:-1:exon
so has part: feature:2133269-2133536:-1:exon
so has part: feature:2099043-2099233:-1:exon
so has part: feature:2093124-2093293:-1:exon
so has part: feature:2091785-2091890:-1:exon
so has part: feature:2084944-2085180:-1:exon
so has part: feature:2079123-2079345:-1:exon
so has part: feature:2071984-2073180:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2163896-2164297:-1:exon

position:2163896:-1
position: 2163896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2133269-2133536:-1:exon

position:2133269:-1
position: 2133269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2133536:-1
position: 2133536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2099043-2099233:-1:exon

position:2099043:-1
position: 2099043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2099233:-1
position: 2099233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2093124-2093293:-1:exon

position:2093124:-1
position: 2093124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2093293:-1
position: 2093293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2091785-2091890:-1:exon

position:2091785:-1
position: 2091785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2091890:-1
position: 2091890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2084944-2085180:-1:exon

position:2084944:-1
position: 2084944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2085180:-1
position: 2085180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2079123-2079345:-1:exon

position:2079123:-1
position: 2079123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2079345:-1
position: 2079345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2071984-2073180:-1:exon

position:2073180:-1
position: 2073180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BRINP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: BRINP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BMP/retinoic acid-inducible neural-specific protein 1
translation: MNWRLVEFLYLLFIWDHILIQPSHQDPAATNQHVSKEFDWLISDRGPFHHSRSYLSFVERHRQGFTTRYKIYREFARWKVRNTAIERRDLLHNPLPLMPEFQRSIRLLGRRPTTQQFIDTIIKKYGTHLLISATLGGEEALTMYMDKSRLDRKSGNATQSVEALHQLASSYFVDRDGTMRRLHEIQISTGAIKVTETRTGPLGCNSYDNLDSVSSVLLQSTESKLHLQGLQIIFPQYLQEKFVQSALSYIMCNGEGEYICRDSQCGCQCSEEFPQCNCPITDIQIMEYTLANMAKTWTEAYKDLENSDEFKSFMKRLPSNHFLTIGSIHQHWGNDWDLQNRYKLLQSSLEAQRQKIQRTARKLFGLSVRCRHNPNHQLPRERTIQEWLTRVQSLLYCNENGFWGTFLESQRSCVCHGGTSLCQRPIPCIIGGNNSCAMCSLANISLCGSCNKGYKLYRGRCEPQNVDSERSEQFISFETDLDFQDLELKYLLQKMDSRLYVHTTFISNEIRLDTFFDPRWRKRMSLTLKSNKNRMDFIHMVIGISMRICQMRNSSLDPMFFVYVNPFSGSHSEGWNMPFGEYGYPRWEKIRLQNSQCYNWTLLLGNRWKTFFETVHIYLRSRTRLPSLLRNETGQGPVDLSDPTKRQFYIKISDVQVYGYSLRFNADLLRSAVQQVNQSYTQGGQFYSSSSVMLLLLDIRDRINRLAPPVAPGKPQLDLFSCMLKHRLKLTNSEIIRVNHALDLYNTEILKQSDQMTAKLC
SIO_010081: BRINP1
subclass of: SO_0000673
so part of: BRINP1
location: complement(join(2072040..2073180,2079123..2079345,2084944..2085180,2091785..2091890,2093124..2093293,2099043..2099233,2133269..2133486))
location: region:2072040-2133486:-1
so has part: feature:2133269-2133486:-1:exon
so has part: feature:2099043-2099233:-1:exon
so has part: feature:2093124-2093293:-1:exon
so has part: feature:2091785-2091890:-1:exon
so has part: feature:2084944-2085180:-1:exon
so has part: feature:2079123-2079345:-1:exon
so has part: feature:2072040-2073180:-1:exon

XP_021407054.1
type: Protein
SIO_000068: ncbiprotein

position:2072040:-1
position: 2072040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2133486:-1
position: 2133486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2133269-2133486:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2099043-2099233:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2093124-2093293:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2091785-2091890:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2084944-2085180:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2079123-2079345:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2072040-2073180:-1:exon

CDK5RAP2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: CDK5RAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2656114..2727059)
location: region:2656114-2727059:-1
so has part: feature:2656114-2727059:-1:exon
subclass of: SO_0000010

110482309
type: Gene
SIO_000068: ncbigene

position:2656114:-1
position: 2656114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2727059:-1
position: 2727059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2656114-2727059:-1:exon

CDK5RAP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: CDK5RAP2
product: CDK5 regulatory subunit associated protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021551487.2
SIO_010081: CDK5RAP2
subclass of: SO_0000673
so part of: CDK5RAP2
location: complement(join(2656114..2656760,2657609..2657655,2660576..2660714,2662622..2662768,2665341..2665594,2665689..2665778,2666730..2666978,2668316..2668437,2668647..2668836,2669101..2669217,2672874..2672999,2674128..2674312,2675048..2675096,2677670..2677902,2679819..2680410,2682519..2682635,2684001..2684265,2686933..2687395,2689515..2689702,2690307..2690354,2690941..2691036,2695445..2695573,2697025..2697140,2698757..2698887,2702076..2702173,2707146..2707319,2708040..2708210,2713608..2713826,2715549..2715641,2716231..2716350,2716766..2716819,2718098..2718260,2719152..2719303,2720746..2720866,2721608..2721684,2722494..2722604,2725996..2726063,2726707..2726768,2726886..2727059))
location: region:2656114-2727059:-1
so has part: feature:2726886-2727059:-1:exon
so has part: feature:2726707-2726768:-1:exon
so has part: feature:2725996-2726063:-1:exon
so has part: feature:2722494-2722604:-1:exon
so has part: feature:2721608-2721684:-1:exon
so has part: feature:2720746-2720866:-1:exon
so has part: feature:2719152-2719303:-1:exon
so has part: feature:2718098-2718260:-1:exon
so has part: feature:2716766-2716819:-1:exon
so has part: feature:2716231-2716350:-1:exon
so has part: feature:2715549-2715641:-1:exon
so has part: feature:2713608-2713826:-1:exon
so has part: feature:2708040-2708210:-1:exon
so has part: feature:2707146-2707319:-1:exon
so has part: feature:2702076-2702173:-1:exon
so has part: feature:2698757-2698887:-1:exon
so has part: feature:2697025-2697140:-1:exon
so has part: feature:2695445-2695573:-1:exon
so has part: feature:2690941-2691036:-1:exon
so has part: feature:2690307-2690354:-1:exon
so has part: feature:2689515-2689702:-1:exon
so has part: feature:2686933-2687395:-1:exon
so has part: feature:2684001-2684265:-1:exon
so has part: feature:2682519-2682635:-1:exon
so has part: feature:2679819-2680410:-1:exon
so has part: feature:2677670-2677902:-1:exon
so has part: feature:2675048-2675096:-1:exon
so has part: feature:2674128-2674312:-1:exon
so has part: feature:2672874-2672999:-1:exon
so has part: feature:2669101-2669217:-1:exon
so has part: feature:2668647-2668836:-1:exon
so has part: feature:2668316-2668437:-1:exon
so has part: feature:2666730-2666978:-1:exon
so has part: feature:2665689-2665778:-1:exon
so has part: feature:2665341-2665594:-1:exon
so has part: feature:2662622-2662768:-1:exon
so has part: feature:2660576-2660714:-1:exon
so has part: feature:2657609-2657655:-1:exon
so has part: feature:2656114-2656760:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2726886-2727059:-1:exon

position:2726886:-1
position: 2726886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2726707-2726768:-1:exon

position:2726707:-1
position: 2726707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2726768:-1
position: 2726768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2725996-2726063:-1:exon

position:2725996:-1
position: 2725996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2726063:-1
position: 2726063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2722494-2722604:-1:exon

position:2722494:-1
position: 2722494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2722604:-1
position: 2722604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2721608-2721684:-1:exon

position:2721608:-1
position: 2721608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2721684:-1
position: 2721684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2720746-2720866:-1:exon

position:2720746:-1
position: 2720746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2720866:-1
position: 2720866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2719152-2719303:-1:exon

position:2719152:-1
position: 2719152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2719303:-1
position: 2719303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2718098-2718260:-1:exon

position:2718098:-1
position: 2718098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2718260:-1
position: 2718260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2716766-2716819:-1:exon

position:2716766:-1
position: 2716766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2716819:-1
position: 2716819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2716231-2716350:-1:exon

position:2716231:-1
position: 2716231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2716350:-1
position: 2716350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2715549-2715641:-1:exon

position:2715549:-1
position: 2715549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2715641:-1
position: 2715641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2713608-2713826:-1:exon

position:2713608:-1
position: 2713608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2713826:-1
position: 2713826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2708040-2708210:-1:exon

position:2708040:-1
position: 2708040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2708210:-1
position: 2708210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2707146-2707319:-1:exon

position:2707146:-1
position: 2707146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2707319:-1
position: 2707319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2702076-2702173:-1:exon

position:2702076:-1
position: 2702076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2702173:-1
position: 2702173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2698757-2698887:-1:exon

position:2698757:-1
position: 2698757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2698887:-1
position: 2698887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2697025-2697140:-1:exon

position:2697025:-1
position: 2697025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2697140:-1
position: 2697140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2695445-2695573:-1:exon

position:2695445:-1
position: 2695445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2695573:-1
position: 2695573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2690941-2691036:-1:exon

position:2690941:-1
position: 2690941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2691036:-1
position: 2691036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2690307-2690354:-1:exon

position:2690307:-1
position: 2690307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2690354:-1
position: 2690354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2689515-2689702:-1:exon

position:2689515:-1
position: 2689515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2689702:-1
position: 2689702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2686933-2687395:-1:exon

position:2686933:-1
position: 2686933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2687395:-1
position: 2687395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2684001-2684265:-1:exon

position:2684001:-1
position: 2684001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2684265:-1
position: 2684265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2682519-2682635:-1:exon

position:2682519:-1
position: 2682519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2682635:-1
position: 2682635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2679819-2680410:-1:exon

position:2679819:-1
position: 2679819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2680410:-1
position: 2680410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2677670-2677902:-1:exon

position:2677670:-1
position: 2677670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2677902:-1
position: 2677902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2675048-2675096:-1:exon

position:2675048:-1
position: 2675048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2675096:-1
position: 2675096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2674128-2674312:-1:exon

position:2674128:-1
position: 2674128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2674312:-1
position: 2674312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2672874-2672999:-1:exon

position:2672874:-1
position: 2672874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2672999:-1
position: 2672999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2669101-2669217:-1:exon

position:2669101:-1
position: 2669101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2669217:-1
position: 2669217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2668647-2668836:-1:exon

position:2668647:-1
position: 2668647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2668836:-1
position: 2668836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:2668316-2668437:-1:exon

position:2668316:-1
position: 2668316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2668437:-1
position: 2668437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:2666730-2666978:-1:exon

position:2666730:-1
position: 2666730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2666978:-1
position: 2666978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:2665689-2665778:-1:exon

position:2665689:-1
position: 2665689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2665778:-1
position: 2665778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:2665341-2665594:-1:exon

position:2665341:-1
position: 2665341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2665594:-1
position: 2665594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:2662622-2662768:-1:exon

position:2662622:-1
position: 2662622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2662768:-1
position: 2662768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:2660576-2660714:-1:exon

position:2660576:-1
position: 2660576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2660714:-1
position: 2660714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:2657609-2657655:-1:exon

position:2657609:-1
position: 2657609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2657655:-1
position: 2657655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:2656114-2656760:-1:exon

position:2656760:-1
position: 2656760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDK5RAP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: CDK5RAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDK5 regulatory subunit-associated protein 2
translation: MDSLPGEDPTLPLAFEGSALQLPDISRGDPQPGPPGRQVVPDVAEDTVSPARARTMKDYENQITDLKKENFNLKLRIYFLEERMQQKFDGPTEEIYKINIELRVEIESLKRELQEREKLLIKAYKAVESLAQGGDAEVQHGKEAQKRMQEMEEMLSGRINLLEENLKAAQEEVEKALAMTEKEKALRIAAEQKLASIIDVPAKDVDKVAEAEKDRLIEQLNLSLKSKEALIQHLEKEKSQSGSSDGNLPAEKIRELTIALRLEKDSEIEALRMELKNERSSFEKKIQSLQEELQERENELAVEKKNGLKRDKTIQGLTVAIKAKEKENEELASEIDELNASLAKAREATHKAHVQKFKGAADYQALLMEKETLLAELRSENLTKDAENRRLQRIIKVTGQELSDLNLEREKMEKELDEAQLQKSRSDKTINDLRNQLEKLHGEMTEKEKAVEHHYNILLSESNQKLQSQELVIRQLTDSVNHKDLLLERLDGTVKEKDAELQELQNKCKNLLRANEELQLKNEGLVEEKCAAQTQQSIIKIVRELEENKEAEYEKLILALRKEQNIYSTLVKTFKESDSINSLQVELNNIFMLRKQLEEDVLGNRNLQKILQDQIKDMKNHKDETFSFCGDQTSYMSICLGEQDHLSLQVDHLSLEELKKKVTDLLLMVKELQSINQELKVRQSGCCTKDSQGKEALEMLNHRECLETTEKPVMQPEDGDNDRKVQNSQFCERVSQVCFQVSLDFPCDVDKQITPSGYSESFCKDRHYRSPIKPQFEHDTTDKHLGRTGMSEHETEENLLTSLLRENRTSVLESTRQEQMKIVNELLDHLNTTEEECSSEDIEKKDEKDLRQMIIQLRAQLKHFKQVTKFLKQRVELKSTFDGEEKLYPDAVPQINKASQSLKVELKDAAMQTMTLESNVMRFKHEGKKGASEEKSKYSRLNAEAEHQQENVYKKGEQHERLSFTRTNEADSASLPKKSRLPVLVRSCRALGNVPLNSWLQKSASEAQHRSRAPPEGLRACEIQTKPFQAQPKGELLHRSGAENLPEEPAQGNTSGRVVSLFKLDNTETQVEFQDVDPGTGDKNENVKDKNQQNYQEMQNHHSMSNGNLQSSLEEVDEEFYPMGHEDIDSAPAQSDSECLHNHQGTGARTDALHGCGATEDIEELKQRVKSMQSELEKYKMFLLQGSEQLLFSGVSSGAVRDAALPVEGFVTQVQGTAMEGVQASSAVPLLDYEIHTKNRDSESVEAPDMWAAQNLKELLLANEAELDKEQVVNVHLDEMYPLQNSLRATSPSKYDSLVHSQVRELSFQCQQIKEIRCACATYHEHLSSLVKAFEELLQACDVDFDLAEGFREQLSQSVLLFEKLEMKFLYGESIGTEVTILYELAQRNNEKNSTMYQHLQDESPVPSALHSSSDFDLSEKSPLGSPEHRHDLQGQHSTLPLLPSKFPPELLMEHLQEIRILRQRLEYSIKTNERLRKQLERQVTDKELDQGSANIFIHGSEQHNSLTSEIHFLRKQNQVLNAMLAKGSRDKQKENEKLRESLSKKNAIIEHLHEDHECTKKENEKLQKQICQKEDEIRYLTCQIYSSRNELNRLQTEINVKQHQISENEKLLQSLRTEIKVYEKLEEARKKGTDPRCDASEEFQKDQKNPLDLHELLAEIQSLRVQLERSIDTNKSLHEKLEEQLSKGKREEEDPVSAVNIKCLLKAGSQPCAALDENLCHCPAARRNIGELQKQQNGRCIPAEKPGTEAAPEGDSASLCSSTSGSSRTCTPRLVPGHRMWADRNGRHVLGLIEDYDALRKHISEGQQVLADMEIALREVTGTTLQEPGVKVVEQASLHGFSTSTHTVQQILEEAARSLKLLWRVSLPLKAAHGTAQGIQDEGMKAEIFRLRKKLSEQEKKLHSTVKRLHSTNQLKENMEKVIIDQLVLTHDVLKKARGNLEVPPAENQKSPSYTSKKRIL
SIO_010081: CDK5RAP2
subclass of: SO_0000673
so part of: CDK5RAP2
location: complement(join(2656701..2656760,2657609..2657655,2660576..2660714,2662622..2662768,2665341..2665594,2665689..2665778,2666730..2666978,2668316..2668437,2668647..2668836,2669101..2669217,2672874..2672999,2674128..2674312,2675048..2675096,2677670..2677902,2679819..2680410,2682519..2682635,2684001..2684265,2686933..2687395,2689515..2689702,2690307..2690354,2690941..2691036,2695445..2695573,2697025..2697140,2698757..2698887,2702076..2702173,2707146..2707319,2708040..2708210,2713608..2713826,2715549..2715641,2716231..2716350,2716766..2716819,2718098..2718260,2719152..2719303,2720746..2720866,2721608..2721684,2722494..2722604,2725996..2726063,2726707..2726768,2726886..2726938))
location: region:2656701-2726938:-1
so has part: feature:2726886-2726938:-1:exon
so has part: feature:2726707-2726768:-1:exon
so has part: feature:2725996-2726063:-1:exon
so has part: feature:2722494-2722604:-1:exon
so has part: feature:2721608-2721684:-1:exon
so has part: feature:2720746-2720866:-1:exon
so has part: feature:2719152-2719303:-1:exon
so has part: feature:2718098-2718260:-1:exon
so has part: feature:2716766-2716819:-1:exon
so has part: feature:2716231-2716350:-1:exon
so has part: feature:2715549-2715641:-1:exon
so has part: feature:2713608-2713826:-1:exon
so has part: feature:2708040-2708210:-1:exon
so has part: feature:2707146-2707319:-1:exon
so has part: feature:2702076-2702173:-1:exon
so has part: feature:2698757-2698887:-1:exon
so has part: feature:2697025-2697140:-1:exon
so has part: feature:2695445-2695573:-1:exon
so has part: feature:2690941-2691036:-1:exon
so has part: feature:2690307-2690354:-1:exon
so has part: feature:2689515-2689702:-1:exon
so has part: feature:2686933-2687395:-1:exon
so has part: feature:2684001-2684265:-1:exon
so has part: feature:2682519-2682635:-1:exon
so has part: feature:2679819-2680410:-1:exon
so has part: feature:2677670-2677902:-1:exon
so has part: feature:2675048-2675096:-1:exon
so has part: feature:2674128-2674312:-1:exon
so has part: feature:2672874-2672999:-1:exon
so has part: feature:2669101-2669217:-1:exon
so has part: feature:2668647-2668836:-1:exon
so has part: feature:2668316-2668437:-1:exon
so has part: feature:2666730-2666978:-1:exon
so has part: feature:2665689-2665778:-1:exon
so has part: feature:2665341-2665594:-1:exon
so has part: feature:2662622-2662768:-1:exon
so has part: feature:2660576-2660714:-1:exon
so has part: feature:2657609-2657655:-1:exon
so has part: feature:2656701-2656760:-1:exon

XP_021407162.1
type: Protein
SIO_000068: ncbiprotein

position:2656701:-1
position: 2656701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2726938:-1
position: 2726938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2726886-2726938:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2726707-2726768:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2725996-2726063:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2722494-2722604:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2721608-2721684:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2720746-2720866:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2719152-2719303:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2718098-2718260:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2716766-2716819:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2716231-2716350:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2715549-2715641:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2713608-2713826:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2708040-2708210:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2707146-2707319:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2702076-2702173:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2698757-2698887:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2697025-2697140:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2695445-2695573:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2690941-2691036:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2690307-2690354:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2689515-2689702:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2686933-2687395:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2684001-2684265:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2682519-2682635:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2679819-2680410:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2677670-2677902:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2675048-2675096:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2674128-2674312:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2672874-2672999:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2669101-2669217:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2668647-2668836:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2668316-2668437:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2666730-2666978:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2665689-2665778:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2665341-2665594:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2662622-2662768:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2660576-2660714:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2657609-2657655:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2656701-2656760:-1:exon

MEGF9
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: MEGF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2735199..2779748)
location: region:2735199-2779748:-1
so has part: feature:2735199-2779748:-1:exon
subclass of: SO_0000010

110482256
type: Gene
SIO_000068: ncbigene

position:2735199:-1
position: 2735199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2779748:-1
position: 2779748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2735199-2779748:-1:exon

MEGF9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: MEGF9
product: multiple EGF like domains 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021551388.1
SIO_010081: MEGF9
subclass of: SO_0000673
so part of: MEGF9
location: complement(join(2735199..2736113,2739721..2739993,2740890..2741033,2744300..2744439,2756953..2757145,2779442..2779611,2779714..2779748))
location: region:2735199-2779748:-1
so has part: feature:2779714-2779748:-1:exon
so has part: feature:2779442-2779611:-1:exon
so has part: feature:2756953-2757145:-1:exon
so has part: feature:2744300-2744439:-1:exon
so has part: feature:2740890-2741033:-1:exon
so has part: feature:2739721-2739993:-1:exon
so has part: feature:2735199-2736113:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2779714-2779748:-1:exon

position:2779714:-1
position: 2779714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2779442-2779611:-1:exon

position:2779442:-1
position: 2779442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2779611:-1
position: 2779611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2756953-2757145:-1:exon

position:2756953:-1
position: 2756953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2757145:-1
position: 2757145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2744300-2744439:-1:exon

position:2744300:-1
position: 2744300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2744439:-1
position: 2744439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2740890-2741033:-1:exon

position:2740890:-1
position: 2740890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2741033:-1
position: 2741033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2739721-2739993:-1:exon

position:2739721:-1
position: 2739721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2739993:-1
position: 2739993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2735199-2736113:-1:exon

position:2736113:-1
position: 2736113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MEGF9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: MEGF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: multiple epidermal growth factor-like domains protein 9
translation: MRRRPSTALALLLGTLPPARPRGTAAPARGSPALPPEEEEEEAVAEEEEEEQQQQQEEEEAAADSGPAGDLCNCSSVGSAGCNRTTGQCRCLAGYAGPRCHGCAHGFFPQQGGQQCQPCSCSPAGATSPQCDHSGRCQCKVGVTDLKCDRCSEGYYRFNETTCEPCQCNNHSHTCDNSTGTCLDCQENTEGKHCELCKEGFYRSTHPAHGCQHCPCSIVASTGTCHLLPGQSVPRCDKCKPGYTGLNCNQCDKGYYNSDSICVRCECNGNVDPALSPSVCRPDSGECIGCLYHTTGTHCELCEEGYTRDSEGTNCTRKEATLGPEPTEFTTSAPNTTKATFFSTAVLNSTLSPTTLQTIFPISSSDNSTSAFADVSWTQFNIIILTVIIIVVVLLMGFVGAVYMYREYQNRKLNAPFWTIELKEDNISFSSYHDSIPNADVSGLLEDDGNEVAPNGQLTLTTPMHNYKA
SIO_010081: MEGF9
subclass of: SO_0000673
so part of: MEGF9
location: complement(join(2735659..2736113,2739721..2739993,2740890..2741033,2744300..2744439,2756953..2757145,2779442..2779611,2779714..2779748))
location: region:2735659-2779748:-1
so has part: feature:2779714-2779748:-1:exon
so has part: feature:2779442-2779611:-1:exon
so has part: feature:2756953-2757145:-1:exon
so has part: feature:2744300-2744439:-1:exon
so has part: feature:2740890-2741033:-1:exon
so has part: feature:2739721-2739993:-1:exon
so has part: feature:2735659-2736113:-1:exon

XP_021407063.1
type: Protein
SIO_000068: ncbiprotein

position:2735659:-1
position: 2735659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2779714-2779748:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2779442-2779611:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2756953-2757145:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2744300-2744439:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2740890-2741033:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2739721-2739993:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2735659-2736113:-1:exon

LOC110482290
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110482290
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2780389..2785530
location: region:2780389-2785530:1
so has part: feature:2780389-2785530:1:exon
subclass of: SO_0000011

110482290
type: Gene
SIO_000068: ncbigene

position:2780389:1
position: 2780389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2785530:1
position: 2785530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2780389-2785530:1:exon

LOC110482290
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110482290
product: uncharacterized LOC110482290
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_002467395.2
SIO_010081: LOC110482290
subclass of: SO_0000673
so part of: LOC110482290
location: join(2780389..2780414,2780519..2780880,2785079..2785530)
location: region:2780389-2785530:1
so has part: feature:2780389-2780414:1:exon
so has part: feature:2780519-2780880:1:exon
so has part: feature:2785079-2785530:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2780389-2780414:1:exon

position:2780414:1
position: 2780414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2780519-2780880:1:exon

position:2780519:1
position: 2780519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2780880:1
position: 2780880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2785079-2785530:1:exon

position:2785079:1
position: 2785079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110482258
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110482258
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2844260..2985470
location: region:2844260-2985470:1
so has part: feature:2844260-2985470:1:exon
subclass of: SO_0000010

110482258
type: Gene
SIO_000068: ncbigene

position:2844260:1
position: 2844260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2985470:1
position: 2985470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2844260-2985470:1:exon

LOC110482258
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110482258
product: collagen alpha-1(XXVII) chain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021551390.2
SIO_010081: LOC110482258
subclass of: SO_0000673
so part of: LOC110482258
location: join(2844260..2844787,2852761..2852831,2857858..2859287,2868256..2868309,2876074..2876127,2881091..2881144,2883061..2883114,2888455..2888499,2889397..2889450,2891806..2891850,2894124..2894177,2895376..2895420,2906189..2906242,2909854..2909898,2912138..2912191,2912548..2912592,2917148..2917201,2917894..2917947,2918102..2918155,2919111..2919164,2919474..2919527,2921430..2921474,2922142..2922195,2923352..2923396,2928880..2928933,2931728..2931781,2932554..2932607,2935762..2935815,2943185..2943238,2943597..2943641,2943759..2943803,2944017..2944070,2944784..2944837,2947035..2947088,2948644..2948697,2949367..2949420,2951290..2951397,2964173..2964226,2964348..2964455,2965829..2965882,2966178..2966231,2970586..2970642,2970800..2970853,2971772..2971825,2973160..2973213,2974739..2974792,2974867..2974974,2975351..2975458,2977302..2977409,2979097..2979150,2979688..2979750,2980171..2980224,2980698..2980733,2981062..2981079,2981443..2981478,2981805..2981831,2982029..2982094,2982482..2982650,2982793..2982902,2983628..2983846,2984401..2985470)
location: region:2844260-2985470:1
so has part: feature:2844260-2844787:1:exon
so has part: feature:2852761-2852831:1:exon
so has part: feature:2857858-2859287:1:exon
so has part: feature:2868256-2868309:1:exon
so has part: feature:2876074-2876127:1:exon
so has part: feature:2881091-2881144:1:exon
so has part: feature:2883061-2883114:1:exon
so has part: feature:2888455-2888499:1:exon
so has part: feature:2889397-2889450:1:exon
so has part: feature:2891806-2891850:1:exon
so has part: feature:2894124-2894177:1:exon
so has part: feature:2895376-2895420:1:exon
so has part: feature:2906189-2906242:1:exon
so has part: feature:2909854-2909898:1:exon
so has part: feature:2912138-2912191:1:exon
so has part: feature:2912548-2912592:1:exon
so has part: feature:2917148-2917201:1:exon
so has part: feature:2917894-2917947:1:exon
so has part: feature:2918102-2918155:1:exon
so has part: feature:2919111-2919164:1:exon
so has part: feature:2919474-2919527:1:exon
so has part: feature:2921430-2921474:1:exon
so has part: feature:2922142-2922195:1:exon
so has part: feature:2923352-2923396:1:exon
so has part: feature:2928880-2928933:1:exon
so has part: feature:2931728-2931781:1:exon
so has part: feature:2932554-2932607:1:exon
so has part: feature:2935762-2935815:1:exon
so has part: feature:2943185-2943238:1:exon
so has part: feature:2943597-2943641:1:exon
so has part: feature:2943759-2943803:1:exon
so has part: feature:2944017-2944070:1:exon
so has part: feature:2944784-2944837:1:exon
so has part: feature:2947035-2947088:1:exon
so has part: feature:2948644-2948697:1:exon
so has part: feature:2949367-2949420:1:exon
so has part: feature:2951290-2951397:1:exon
so has part: feature:2964173-2964226:1:exon
so has part: feature:2964348-2964455:1:exon
so has part: feature:2965829-2965882:1:exon
so has part: feature:2966178-2966231:1:exon
so has part: feature:2970586-2970642:1:exon
so has part: feature:2970800-2970853:1:exon
so has part: feature:2971772-2971825:1:exon
so has part: feature:2973160-2973213:1:exon
so has part: feature:2974739-2974792:1:exon
so has part: feature:2974867-2974974:1:exon
so has part: feature:2975351-2975458:1:exon
so has part: feature:2977302-2977409:1:exon
so has part: feature:2979097-2979150:1:exon
so has part: feature:2979688-2979750:1:exon
so has part: feature:2980171-2980224:1:exon
so has part: feature:2980698-2980733:1:exon
so has part: feature:2981062-2981079:1:exon
so has part: feature:2981443-2981478:1:exon
so has part: feature:2981805-2981831:1:exon
so has part: feature:2982029-2982094:1:exon
so has part: feature:2982482-2982650:1:exon
so has part: feature:2982793-2982902:1:exon
so has part: feature:2983628-2983846:1:exon
so has part: feature:2984401-2985470:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2844260-2844787:1:exon

position:2844787:1
position: 2844787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2852761-2852831:1:exon

position:2852761:1
position: 2852761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2852831:1
position: 2852831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2857858-2859287:1:exon

position:2857858:1
position: 2857858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2859287:1
position: 2859287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2868256-2868309:1:exon

position:2868256:1
position: 2868256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2868309:1
position: 2868309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2876074-2876127:1:exon

position:2876074:1
position: 2876074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2876127:1
position: 2876127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2881091-2881144:1:exon

position:2881091:1
position: 2881091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2881144:1
position: 2881144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2883061-2883114:1:exon

position:2883061:1
position: 2883061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2883114:1
position: 2883114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2888455-2888499:1:exon

position:2888455:1
position: 2888455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2888499:1
position: 2888499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2889397-2889450:1:exon

position:2889397:1
position: 2889397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2889450:1
position: 2889450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2891806-2891850:1:exon

position:2891806:1
position: 2891806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2891850:1
position: 2891850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2894124-2894177:1:exon

position:2894124:1
position: 2894124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2894177:1
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urn:…
SIO_000300: 12
SIO_000628: feature:2895376-2895420:1:exon

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SIO_000300: 13
SIO_000628: feature:2906189-2906242:1:exon

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urn:…
SIO_000300: 14
SIO_000628: feature:2909854-2909898:1:exon

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SIO_000300: 15
SIO_000628: feature:2912138-2912191:1:exon

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SIO_000300: 16
SIO_000628: feature:2912548-2912592:1:exon

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urn:…
SIO_000300: 17
SIO_000628: feature:2917148-2917201:1:exon

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SIO_000300: 18
SIO_000628: feature:2917894-2917947:1:exon

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SIO_000300: 19
SIO_000628: feature:2918102-2918155:1:exon

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SIO_000300: 20
SIO_000628: feature:2919111-2919164:1:exon

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SIO_000300: 21
SIO_000628: feature:2919474-2919527:1:exon

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SIO_000300: 22
SIO_000628: feature:2921430-2921474:1:exon

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SIO_000300: 23
SIO_000628: feature:2922142-2922195:1:exon

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SIO_000300: 24
SIO_000628: feature:2923352-2923396:1:exon

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SIO_000300: 25
SIO_000628: feature:2928880-2928933:1:exon

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SIO_000300: 26
SIO_000628: feature:2931728-2931781:1:exon

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SIO_000300: 27
SIO_000628: feature:2932554-2932607:1:exon

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SIO_000300: 28
SIO_000628: feature:2935762-2935815:1:exon

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SIO_000300: 29
SIO_000628: feature:2943185-2943238:1:exon

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SIO_000300: 30
SIO_000628: feature:2943597-2943641:1:exon

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SIO_000300: 31
SIO_000628: feature:2943759-2943803:1:exon

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SIO_000300: 32
SIO_000628: feature:2944017-2944070:1:exon

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SIO_000300: 33
SIO_000628: feature:2944784-2944837:1:exon

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SIO_000300: 34
SIO_000628: feature:2947035-2947088:1:exon

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SIO_000300: 35
SIO_000628: feature:2948644-2948697:1:exon

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SIO_000300: 36
SIO_000628: feature:2949367-2949420:1:exon

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SIO_000300: 37
SIO_000628: feature:2951290-2951397:1:exon

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SIO_000300: 38
SIO_000628: feature:2964173-2964226:1:exon

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urn:…
SIO_000300: 39
SIO_000628: feature:2964348-2964455:1:exon

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SIO_000300: 40
SIO_000628: feature:2965829-2965882:1:exon

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SIO_000300: 41
SIO_000628: feature:2966178-2966231:1:exon

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SIO_000300: 42
SIO_000628: feature:2970586-2970642:1:exon

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SIO_000300: 43
SIO_000628: feature:2970800-2970853:1:exon

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SIO_000300: 44
SIO_000628: feature:2971772-2971825:1:exon

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SIO_000300: 45
SIO_000628: feature:2973160-2973213:1:exon

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urn:…
SIO_000300: 46
SIO_000628: feature:2974739-2974792:1:exon

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urn:…
SIO_000300: 47
SIO_000628: feature:2974867-2974974:1:exon

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SIO_000300: 48
SIO_000628: feature:2975351-2975458:1:exon

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SIO_000300: 49
SIO_000628: feature:2977302-2977409:1:exon

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SIO_000300: 50
SIO_000628: feature:2979097-2979150:1:exon

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SIO_000300: 51
SIO_000628: feature:2979688-2979750:1:exon

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SIO_000300: 52
SIO_000628: feature:2980171-2980224:1:exon

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SIO_000300: 53
SIO_000628: feature:2980698-2980733:1:exon

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SIO_000300: 54
SIO_000628: feature:2981062-2981079:1:exon

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SIO_000300: 55
SIO_000628: feature:2981443-2981478:1:exon

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SIO_000300: 56
SIO_000628: feature:2981805-2981831:1:exon

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SIO_000300: 57
SIO_000628: feature:2982029-2982094:1:exon

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urn:…
SIO_000300: 58
SIO_000628: feature:2982482-2982650:1:exon

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urn:…
SIO_000300: 59
SIO_000628: feature:2982793-2982902:1:exon

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urn:…
SIO_000300: 60
SIO_000628: feature:2983628-2983846:1:exon

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urn:…
SIO_000300: 61
SIO_000628: feature:2984401-2985470:1:exon

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reference: sequence
type: ForwardStrandPosition
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LOC110482258
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110482258
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXVII) chain
translation: MEPESEPVSRLRATAAGRGGFCFLWTILCFTWFLGFTQGNSEDVDVLQRLGLSGKRPSSGWSSSRSVPQGVIPFKSGVIFTQRARVEAPLSTLLPAGSSSDLLLVLSLCSHRINNAFLFAVRSKKKKLQLGVQFVPGKIIVYVGHKRSVYFDYNVHDGQWHNMAINIRGQTVTLFTSCGKRRVHADLHFKKDEALDPHGSFLFGKISQHAVQFEGAICQFDIYPSAKAAHHYCKYLKKQCRQADTYRPNLPPLIPLLPRDPSASPSTPQRTEPSLQGLKNLTTAAPNLEVGRVTAPLKTRGSSTTTPTLLSTPPSRPRLTTKATKITVAPPVPSSTKSQVPTQSPRGTGTTLRVSQTTPSTRREKTQTPLPTAKRAPPTSQSLVTASRKASEQETKKKISQKPTVESPEAPSTVKPPRRVTDNTTSNVHLVTLKPTPQKPSRGPIPKKPSPTRRVDPSIIPLVYTKPPLGSARPTSRARAFNLTTLAATDAYQIFDPLGPTPFPFLLGFPGVKGERGPQGPPGLPGLPGPPGKRGSRGPPGPHGNPGSPGPPGLKGQKGDPGLSPGKARNGQKGDVGLPGLTGFPGPPGRKGYKGYPGPLGHPGDQGERGPAGSPGAKGYPGRQGLPGPIGESGPKGTRGYIGLPGLFGLPGADGERGIPGVPGKRGKMGRPGFPGNFGERGPPGIDGNPGELGAPGPPGVLGLIGDMGPVGPIGYPGPKGLKGLMGNPGEHGLKGDKGDQGRAGVPGDIGFQGDKGSQGLPGVPGARGKAGPLGKVGDKGPVGFPGPPGPEGFPGDIGPPGENGPEGLKGKPGARGLPGPRGLPGQEGDEGPLGPPGVPGPEGRSGRKGFPGTPGPNGPKGEPGNRGRPGKVGEQGLMGFIGPVGEPGIAGEKGDRGPVGPPGPPGVKGSMGHPGMPGGVGFPGIPGPTGPAGARGAPGIRGTKGRRGARGPDGPVGEPGARGAKGRPGEPGRVGPDGLQGKMGETGATGARGFPGIQGPSGPPGAKGAPGDPGPQGPQGPPGPLGEMGLKGPPGSMGQPGPAGEPGMKGDPGQLGIPGEQGLVGQRGESGLEGDTGQLGPDGIKGDKGEQGPEGEKGEKGSEGLKGKEGSPGYPGIPGVRGPEGKPGKQGEKGKPGQKGSKGYQGQLGEMGSPGKQGPKGNQGPKGSRGTLGPMGAPGRMGAQGDPGLKGYQGHAGPPGPIGPPGPKGEKGQQGDDGKVEGPQGPPGDRGPVGDRGDRGEPGDTGYPGQEGLDGERGKPGQQGLPGDPGSPGKPGAKGSKGDVGQKGKQGAQGSAGSRGSPGILGLPGPRGVVGRQGQEGAPGVDGVPGKDGVPGMLGEQGDDGEEGVTGMPGKRGNPGVPGLPGAQGPPGFKGERGLPGQTGQTGKRGSPGGTGLPGSPGEPGAKGQPGDFGEAGFPGIAGLFGPKGPPGDLGFKGIQGPRGPPGLMGKEGIIGPLGIQGPMGSPGPKGDKGSRGEMGLQGPRGPPGPRGHPGPPGPPGVPASFQQDGFGAAFQTLIDSNTALKREGYQNPDLLMLDHGGEIFKTLHYLSNLIQSIKRPLGTKENPARICRDLMNCEQKMTDGTYWIDPNLGCSSDTIQVICNFTNGGQTCLSPVTVSKLDFDIGRVQMNFLRLLSSEVVQHITIHCLNTSVWREGSSESPSEKAVRFRAWNGQVFEASGQLRPEVAADDCKIKDGRWHRTLFSFRTQDPQQLPIVSIHNLPPSQPGQQYHLEVGPVCFL
SIO_010081: LOC110482258
subclass of: SO_0000673
so part of: LOC110482258
location: join(2844732..2844787,2852761..2852831,2857858..2859287,2868256..2868309,2876074..2876127,2881091..2881144,2883061..2883114,2888455..2888499,2889397..2889450,2891806..2891850,2894124..2894177,2895376..2895420,2906189..2906242,2909854..2909898,2912138..2912191,2912548..2912592,2917148..2917201,2917894..2917947,2918102..2918155,2919111..2919164,2919474..2919527,2921430..2921474,2922142..2922195,2923352..2923396,2928880..2928933,2931728..2931781,2932554..2932607,2935762..2935815,2943185..2943238,2943597..2943641,2943759..2943803,2944017..2944070,2944784..2944837,2947035..2947088,2948644..2948697,2949367..2949420,2951290..2951397,2964173..2964226,2964348..2964455,2965829..2965882,2966178..2966231,2970586..2970642,2970800..2970853,2971772..2971825,2973160..2973213,2974739..2974792,2974867..2974974,2975351..2975458,2977302..2977409,2979097..2979150,2979688..2979750,2980171..2980224,2980698..2980733,2981062..2981079,2981443..2981478,2981805..2981831,2982029..2982094,2982482..2982650,2982793..2982902,2983628..2983846,2984401..2984547)
location: region:2844732-2984547:1
so has part: feature:2844732-2844787:1:exon
so has part: feature:2852761-2852831:1:exon
so has part: feature:2857858-2859287:1:exon
so has part: feature:2868256-2868309:1:exon
so has part: feature:2876074-2876127:1:exon
so has part: feature:2881091-2881144:1:exon
so has part: feature:2883061-2883114:1:exon
so has part: feature:2888455-2888499:1:exon
so has part: feature:2889397-2889450:1:exon
so has part: feature:2891806-2891850:1:exon
so has part: feature:2894124-2894177:1:exon
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so has part: feature:2909854-2909898:1:exon
so has part: feature:2912138-2912191:1:exon
so has part: feature:2912548-2912592:1:exon
so has part: feature:2917148-2917201:1:exon
so has part: feature:2917894-2917947:1:exon
so has part: feature:2918102-2918155:1:exon
so has part: feature:2919111-2919164:1:exon
so has part: feature:2919474-2919527:1:exon
so has part: feature:2921430-2921474:1:exon
so has part: feature:2922142-2922195:1:exon
so has part: feature:2923352-2923396:1:exon
so has part: feature:2928880-2928933:1:exon
so has part: feature:2931728-2931781:1:exon
so has part: feature:2932554-2932607:1:exon
so has part: feature:2935762-2935815:1:exon
so has part: feature:2943185-2943238:1:exon
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so has part: feature:2943759-2943803:1:exon
so has part: feature:2944017-2944070:1:exon
so has part: feature:2944784-2944837:1:exon
so has part: feature:2947035-2947088:1:exon
so has part: feature:2948644-2948697:1:exon
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so has part: feature:2951290-2951397:1:exon
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so has part: feature:2970800-2970853:1:exon
so has part: feature:2971772-2971825:1:exon
so has part: feature:2973160-2973213:1:exon
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so has part: feature:2974867-2974974:1:exon
so has part: feature:2975351-2975458:1:exon
so has part: feature:2977302-2977409:1:exon
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so has part: feature:2981805-2981831:1:exon
so has part: feature:2982029-2982094:1:exon
so has part: feature:2982482-2982650:1:exon
so has part: feature:2982793-2982902:1:exon
so has part: feature:2983628-2983846:1:exon
so has part: feature:2984401-2984547:1:exon

XP_021407065.1
type: Protein
SIO_000068: ncbiprotein

position:2844732:1
position: 2844732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2984547:1
position: 2984547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2844732-2844787:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2852761-2852831:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2857858-2859287:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2868256-2868309:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2876074-2876127:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2881091-2881144:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2883061-2883114:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2888455-2888499:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2889397-2889450:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2891806-2891850:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2894124-2894177:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2895376-2895420:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2906189-2906242:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2909854-2909898:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2912138-2912191:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2912548-2912592:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2917148-2917201:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2917894-2917947:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2918102-2918155:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2919111-2919164:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2919474-2919527:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2921430-2921474:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2922142-2922195:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2923352-2923396:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2928880-2928933:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2931728-2931781:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2932554-2932607:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2935762-2935815:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2943185-2943238:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2943597-2943641:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2943759-2943803:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2944017-2944070:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2944784-2944837:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2947035-2947088:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2948644-2948697:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2949367-2949420:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2951290-2951397:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2964173-2964226:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2964348-2964455:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2965829-2965882:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2966178-2966231:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2970586-2970642:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2970800-2970853:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2971772-2971825:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:2973160-2973213:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:2974739-2974792:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:2974867-2974974:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:2975351-2975458:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:2977302-2977409:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:2979097-2979150:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:2979688-2979750:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:2980171-2980224:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:2980698-2980733:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:2981062-2981079:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:2981443-2981478:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:2981805-2981831:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:2982029-2982094:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:2982482-2982650:1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:2982793-2982902:1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:2983628-2983846:1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:2984401-2984547:1:exon

ORM2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: ORM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2988006..2990379
location: region:2988006-2990379:1
so has part: feature:2988006-2990379:1:exon
subclass of: SO_0000010

110482283
type: Gene
SIO_000068: ncbigene

position:2988006:1
position: 2988006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2990379:1
position: 2990379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2988006-2990379:1:exon

ORM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ORM2
product: orosomucoid 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021551432.2
SIO_010081: ORM2
subclass of: SO_0000673
so part of: ORM2
location: join(2988006..2988203,2988848..2988990,2989214..2989281,2989552..2989653,2989862..2989962,2990172..2990379)
location: region:2988006-2990379:1
so has part: feature:2988006-2988203:1:exon
so has part: feature:2988848-2988990:1:exon
so has part: feature:2989214-2989281:1:exon
so has part: feature:2989552-2989653:1:exon
so has part: feature:2989862-2989962:1:exon
so has part: feature:2990172-2990379:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2988006-2988203:1:exon

position:2988203:1
position: 2988203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2988848-2988990:1:exon

position:2988848:1
position: 2988848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2988990:1
position: 2988990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2989214-2989281:1:exon

position:2989214:1
position: 2989214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2989281:1
position: 2989281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2989552-2989653:1:exon

position:2989552:1
position: 2989552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2989653:1
position: 2989653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2989862-2989962:1:exon

position:2989862:1
position: 2989862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2989962:1
position: 2989962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2990172-2990379:1:exon

position:2990172:1
position: 2990172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ORM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ORM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1-acid glycoprotein 2
translation: MLATLTLFLGLPLALATESPSCAPLVPITFDNTTIPQILGQWFYITGASRYPPHLAELRAVTFAAFSFSPGSHEDELNCTEIIRMNETCVVKNSTIQVFQQNSTMAHVDNGVVSMARLIQSDKDLLILNHINIDVPSLSLSARTPNVSKEHMEEFKAHLQCLGFTEEEVFYTSIEHACPLPGGEDNADPQLG
SIO_010081: ORM2
subclass of: SO_0000673
so part of: ORM2
location: join(2988093..2988203,2988848..2988990,2989214..2989281,2989552..2989653,2989862..2989962,2990172..2990225)
location: region:2988093-2990225:1
so has part: feature:2988093-2988203:1:exon
so has part: feature:2988848-2988990:1:exon
so has part: feature:2989214-2989281:1:exon
so has part: feature:2989552-2989653:1:exon
so has part: feature:2989862-2989962:1:exon
so has part: feature:2990172-2990225:1:exon

XP_021407107.1
type: Protein
SIO_000068: ncbiprotein

position:2988093:1
position: 2988093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2990225:1
position: 2990225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2988093-2988203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2988848-2988990:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2989214-2989281:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2989552-2989653:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2989862-2989962:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2990172-2990225:1:exon

LOC110482241
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110482241
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2991331..2997206
location: region:2991331-2997206:1
so has part: feature:2991331-2997206:1:exon
subclass of: SO_0000010

110482241
type: Gene
SIO_000068: ncbigene

position:2991331:1
position: 2991331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2997206:1
position: 2997206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2991331-2997206:1:exon

LOC110482241
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110482241
product: alpha-1-acid glycoprotein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021551365.2
SIO_010081: LOC110482241
subclass of: SO_0000673
so part of: LOC110482241
location: join(2991331..2991544,2992558..2992700,2993287..2993360,2994047..2994157,2995533..2995636,2997051..2997206)
location: region:2991331-2997206:1
so has part: feature:2991331-2991544:1:exon
so has part: feature:2992558-2992700:1:exon
so has part: feature:2993287-2993360:1:exon
so has part: feature:2994047-2994157:1:exon
so has part: feature:2995533-2995636:1:exon
so has part: feature:2997051-2997206:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2991331-2991544:1:exon

position:2991544:1
position: 2991544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2992558-2992700:1:exon

position:2992558:1
position: 2992558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2992700:1
position: 2992700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2993287-2993360:1:exon

position:2993287:1
position: 2993287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2993360:1
position: 2993360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2994047-2994157:1:exon

position:2994047:1
position: 2994047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2994157:1
position: 2994157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2995533-2995636:1:exon

position:2995533:1
position: 2995533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2995636:1
position: 2995636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2997051-2997206:1:exon

position:2997051:1
position: 2997051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110482241
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110482241
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1-acid glycoprotein-like
translation: MGSAGLLLVLGLAALLPADAAPCGAQRPDSSTAAQLLGTWLYVAGAAQFPQHQVEMLLIDHAFLRLEPGAGGQELLVSHYVAVGNQCFTNNLTYLEVAAGNATLVKHAKTQQTEGMLMNMSSENLLLIQYQMQKERTYLGQYLYARSLSLSTADKEEFEQHVECLGLRAEQIVYAPWRTEVCQVKEAEGSDSPHAEPAAAATAAPAPGTPWPGSAGN
SIO_010081: LOC110482241
subclass of: SO_0000673
so part of: LOC110482241
location: join(2991440..2991544,2992558..2992700,2993287..2993360,2994047..2994157,2995533..2995636,2997051..2997167)
location: region:2991440-2997167:1
so has part: feature:2991440-2991544:1:exon
so has part: feature:2992558-2992700:1:exon
so has part: feature:2993287-2993360:1:exon
so has part: feature:2994047-2994157:1:exon
so has part: feature:2995533-2995636:1:exon
so has part: feature:2997051-2997167:1:exon

XP_021407040.1
type: Protein
SIO_000068: ncbiprotein

position:2991440:1
position: 2991440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2997167:1
position: 2997167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2991440-2991544:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2992558-2992700:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2993287-2993360:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2994047-2994157:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2995533-2995636:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2997051-2997167:1:exon

SLC25A25
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SLC25A25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2999264..3025987)
location: region:2999264-3025987:-1
so has part: feature:2999264-3025987:-1:exon
subclass of: SO_0000010

110482306
type: Gene
SIO_000068: ncbigene

position:2999264:-1
position: 2999264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3025987:-1
position: 3025987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2999264-3025987:-1:exon

SLC25A25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SLC25A25
product: solute carrier family 25 member 25, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021551475.2
SIO_010081: SLC25A25
subclass of: SO_0000673
so part of: SLC25A25
location: complement(join(2999264..3001804,3002212..3002362,3002849..3003016,3003246..3003353,3003458..3003610,3004365..3004523,3005220..3005331,3005630..3005665,3006110..3006197,3006285..3006411,3025665..3025987))
location: region:2999264-3025987:-1
so has part: feature:3025665-3025987:-1:exon
so has part: feature:3006285-3006411:-1:exon
so has part: feature:3006110-3006197:-1:exon
so has part: feature:3005630-3005665:-1:exon
so has part: feature:3005220-3005331:-1:exon
so has part: feature:3004365-3004523:-1:exon
so has part: feature:3003458-3003610:-1:exon
so has part: feature:3003246-3003353:-1:exon
so has part: feature:3002849-3003016:-1:exon
so has part: feature:3002212-3002362:-1:exon
so has part: feature:2999264-3001804:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3025665-3025987:-1:exon

position:3025665:-1
position: 3025665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3006285-3006411:-1:exon

position:3006285:-1
position: 3006285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3006411:-1
position: 3006411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3006110-3006197:-1:exon

position:3006110:-1
position: 3006110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3006197:-1
position: 3006197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3005630-3005665:-1:exon

position:3005630:-1
position: 3005630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3005665:-1
position: 3005665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3005220-3005331:-1:exon

position:3005220:-1
position: 3005220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3005331:-1
position: 3005331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3004365-3004523:-1:exon

position:3004365:-1
position: 3004365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3004523:-1
position: 3004523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3003458-3003610:-1:exon

position:3003458:-1
position: 3003458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3003610:-1
position: 3003610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3003246-3003353:-1:exon

position:3003246:-1
position: 3003246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3003353:-1
position: 3003353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3002849-3003016:-1:exon

position:3002849:-1
position: 3002849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3003016:-1
position: 3003016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3002212-3002362:-1:exon

position:3002212:-1
position: 3002212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3002362:-1
position: 3002362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2999264-3001804:-1:exon

position:3001804:-1
position: 3001804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC25A25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SLC25A25
product: solute carrier family 25 member 25, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021551476.2
SIO_010081: SLC25A25
subclass of: SO_0000673
so part of: SLC25A25
location: complement(join(2999264..3001804,3002212..3002362,3002849..3003016,3003246..3003353,3003458..3003610,3004365..3004523,3005220..3005331,3006110..3006197,3006285..3006411,3025665..3025985))
location: region:2999264-3025985:-1
so has part: feature:3025665-3025985:-1:exon
so has part: feature:3006285-3006411:-1:exon
so has part: feature:3006110-3006197:-1:exon
so has part: feature:3005220-3005331:-1:exon
so has part: feature:3004365-3004523:-1:exon
so has part: feature:3003458-3003610:-1:exon
so has part: feature:3003246-3003353:-1:exon
so has part: feature:3002849-3003016:-1:exon
so has part: feature:3002212-3002362:-1:exon
so has part: feature:2999264-3001804:-1:exon

position:3025985:-1
position: 3025985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3025665-3025985:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3006285-3006411:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3006110-3006197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3005220-3005331:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3004365-3004523:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3003458-3003610:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3003246-3003353:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3002849-3003016:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3002212-3002362:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2999264-3001804:-1:exon

SLC25A25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SLC25A25
product: solute carrier family 25 member 25, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021551482.1
SIO_010081: SLC25A25
subclass of: SO_0000673
so part of: SLC25A25
location: complement(join(2999264..3001804,3002212..3002362,3002849..3003016,3003246..3003353,3003458..3003610,3004365..3004523,3005220..3005331,3005630..3005665,3006110..3006197,3006285..3006411,3024028..3024163,3025665..3025751))
location: region:2999264-3025751:-1
so has part: feature:3025665-3025751:-1:exon
so has part: feature:3024028-3024163:-1:exon
so has part: feature:3006285-3006411:-1:exon
so has part: feature:3006110-3006197:-1:exon
so has part: feature:3005630-3005665:-1:exon
so has part: feature:3005220-3005331:-1:exon
so has part: feature:3004365-3004523:-1:exon
so has part: feature:3003458-3003610:-1:exon
so has part: feature:3003246-3003353:-1:exon
so has part: feature:3002849-3003016:-1:exon
so has part: feature:3002212-3002362:-1:exon
so has part: feature:2999264-3001804:-1:exon

position:3025751:-1
position: 3025751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3025665-3025751:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3024028-3024163:-1:exon

position:3024028:-1
position: 3024028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3024163:-1
position: 3024163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3006285-3006411:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3006110-3006197:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3005630-3005665:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3005220-3005331:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3004365-3004523:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3003458-3003610:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3003246-3003353:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3002849-3003016:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3002212-3002362:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2999264-3001804:-1:exon

SLC25A25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SLC25A25
product: solute carrier family 25 member 25, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021551481.2
SIO_010081: SLC25A25
subclass of: SO_0000673
so part of: SLC25A25
location: complement(join(2999264..3001804,3002212..3002362,3002849..3003016,3003246..3003353,3003458..3003610,3004365..3004523,3005220..3005331,3005630..3005665,3006110..3006197,3006285..3006411,3024028..3025425))
location: region:2999264-3025425:-1
so has part: feature:3024028-3025425:-1:exon
so has part: feature:3006285-3006411:-1:exon
so has part: feature:3006110-3006197:-1:exon
so has part: feature:3005630-3005665:-1:exon
so has part: feature:3005220-3005331:-1:exon
so has part: feature:3004365-3004523:-1:exon
so has part: feature:3003458-3003610:-1:exon
so has part: feature:3003246-3003353:-1:exon
so has part: feature:3002849-3003016:-1:exon
so has part: feature:3002212-3002362:-1:exon
so has part: feature:2999264-3001804:-1:exon

position:3025425:-1
position: 3025425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3024028-3025425:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3006285-3006411:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3006110-3006197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3005630-3005665:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3005220-3005331:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3004365-3004523:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3003458-3003610:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3003246-3003353:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3002849-3003016:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3002212-3002362:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2999264-3001804:-1:exon

SLC25A25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SLC25A25
product: solute carrier family 25 member 25, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021551477.2
SIO_010081: SLC25A25
subclass of: SO_0000673
so part of: SLC25A25
location: complement(join(2999264..3001804,3002212..3002362,3002849..3003016,3003246..3003353,3003458..3003610,3004365..3004523,3005220..3005331,3005630..3005665,3006110..3006197,3006285..3006411,3014659..3015399))
location: region:2999264-3015399:-1
so has part: feature:3014659-3015399:-1:exon
so has part: feature:3006285-3006411:-1:exon
so has part: feature:3006110-3006197:-1:exon
so has part: feature:3005630-3005665:-1:exon
so has part: feature:3005220-3005331:-1:exon
so has part: feature:3004365-3004523:-1:exon
so has part: feature:3003458-3003610:-1:exon
so has part: feature:3003246-3003353:-1:exon
so has part: feature:3002849-3003016:-1:exon
so has part: feature:3002212-3002362:-1:exon
so has part: feature:2999264-3001804:-1:exon

position:3015399:-1
position: 3015399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3014659-3015399:-1:exon

position:3014659:-1
position: 3014659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3006285-3006411:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3006110-3006197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3005630-3005665:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3005220-3005331:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3004365-3004523:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3003458-3003610:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3003246-3003353:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3002849-3003016:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3002212-3002362:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2999264-3001804:-1:exon

SLC25A25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SLC25A25
product: solute carrier family 25 member 25, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021551478.2
SIO_010081: SLC25A25
subclass of: SO_0000673
so part of: SLC25A25
location: complement(join(2999264..3001804,3002212..3002362,3002849..3003016,3003246..3003353,3003458..3003610,3004365..3004523,3005220..3005331,3006110..3006197,3006285..3006411,3014659..3015398))
location: region:2999264-3015398:-1
so has part: feature:3014659-3015398:-1:exon
so has part: feature:3006285-3006411:-1:exon
so has part: feature:3006110-3006197:-1:exon
so has part: feature:3005220-3005331:-1:exon
so has part: feature:3004365-3004523:-1:exon
so has part: feature:3003458-3003610:-1:exon
so has part: feature:3003246-3003353:-1:exon
so has part: feature:3002849-3003016:-1:exon
so has part: feature:3002212-3002362:-1:exon
so has part: feature:2999264-3001804:-1:exon

position:3015398:-1
position: 3015398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3014659-3015398:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3006285-3006411:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3006110-3006197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3005220-3005331:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3004365-3004523:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3003458-3003610:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3003246-3003353:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3002849-3003016:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3002212-3002362:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2999264-3001804:-1:exon

SLC25A25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SLC25A25
product: solute carrier family 25 member 25, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021551479.2
SIO_010081: SLC25A25
subclass of: SO_0000673
so part of: SLC25A25
location: complement(join(2999264..3001804,3002212..3002362,3002849..3003016,3003246..3003353,3003458..3003610,3004365..3004523,3005220..3005331,3005630..3005665,3006110..3006197,3006285..3006411,3008922..3009293))
location: region:2999264-3009293:-1
so has part: feature:3008922-3009293:-1:exon
so has part: feature:3006285-3006411:-1:exon
so has part: feature:3006110-3006197:-1:exon
so has part: feature:3005630-3005665:-1:exon
so has part: feature:3005220-3005331:-1:exon
so has part: feature:3004365-3004523:-1:exon
so has part: feature:3003458-3003610:-1:exon
so has part: feature:3003246-3003353:-1:exon
so has part: feature:3002849-3003016:-1:exon
so has part: feature:3002212-3002362:-1:exon
so has part: feature:2999264-3001804:-1:exon

position:3009293:-1
position: 3009293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3008922-3009293:-1:exon

position:3008922:-1
position: 3008922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3006285-3006411:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3006110-3006197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3005630-3005665:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3005220-3005331:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3004365-3004523:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3003458-3003610:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3003246-3003353:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3002849-3003016:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3002212-3002362:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2999264-3001804:-1:exon

SLC25A25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SLC25A25
product: solute carrier family 25 member 25, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_021551480.2
SIO_010081: SLC25A25
subclass of: SO_0000673
so part of: SLC25A25
location: complement(join(2999264..3001804,3002212..3002362,3002849..3003016,3003246..3003353,3003458..3003610,3004365..3004523,3005220..3005331,3006110..3006197,3006285..3006411,3008922..3009291))
location: region:2999264-3009291:-1
so has part: feature:3008922-3009291:-1:exon
so has part: feature:3006285-3006411:-1:exon
so has part: feature:3006110-3006197:-1:exon
so has part: feature:3005220-3005331:-1:exon
so has part: feature:3004365-3004523:-1:exon
so has part: feature:3003458-3003610:-1:exon
so has part: feature:3003246-3003353:-1:exon
so has part: feature:3002849-3003016:-1:exon
so has part: feature:3002212-3002362:-1:exon
so has part: feature:2999264-3001804:-1:exon

position:3009291:-1
position: 3009291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3008922-3009291:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3006285-3006411:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3006110-3006197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3005220-3005331:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3004365-3004523:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3003458-3003610:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3003246-3003353:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3002849-3003016:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3002212-3002362:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2999264-3001804:-1:exon

SLC25A25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SLC25A25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding mitochondrial carrier protein SCaMC-2 isoform X2
translation: MPGARRSLASPVVSGVLCPCGSPHGSAVESGGGGGGGNAGSCGRSVCEASDQDRRLRTLFQKLDVNRDGALCIHDLAVGLGRLGLHRTELDLRKIVKAGDKDLDGQLDFEEFVHYLQDHEKKLRLVFKSLDKKNDGRIDAQEIVQSLRDLGVKISEQQAEKILKSMDKNGTMTIDWNEWRDYHLLHPVENIPEIILYWKHSTIFDVGENLTVPDEFTVEERQTGMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNNMCIIGGFTQMIREGGPRSLWRGNGINVLKIAPESAIKFMAYEQIKRFIGTDQEMLRIHERLLAGSLAGAIAQSSIYPMEVLKTRMALRKTGQYSGMLDCAKNILAKEGMAAFYKGYIPNMLGIIPYAGIDLAVYETLKNTWLQRYAVNSADPGVFVLLACGTISSTCGQLASYPLALVRTRMQAQASVEGAPEVTMRGLFKHILKTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLKMTLGVDSR
SIO_010081: SLC25A25
subclass of: SO_0000673
so part of: SLC25A25
location: complement(join(3001620..3001804,3002212..3002362,3002849..3003016,3003246..3003353,3003458..3003610,3004365..3004523,3005220..3005331,3006110..3006197,3006285..3006411,3025665..3025943))
location: region:3001620-3025943:-1
so has part: feature:3025665-3025943:-1:exon
so has part: feature:3006285-3006411:-1:exon
so has part: feature:3006110-3006197:-1:exon
so has part: feature:3005220-3005331:-1:exon
so has part: feature:3004365-3004523:-1:exon
so has part: feature:3003458-3003610:-1:exon
so has part: feature:3003246-3003353:-1:exon
so has part: feature:3002849-3003016:-1:exon
so has part: feature:3002212-3002362:-1:exon
so has part: feature:3001620-3001804:-1:exon

XP_021407151.1
type: Protein
SIO_000068: ncbiprotein

position:3001620:-1
position: 3001620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3025943:-1
position: 3025943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3025665-3025943:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3006285-3006411:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3006110-3006197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3005220-3005331:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3004365-3004523:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3003458-3003610:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3003246-3003353:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3002849-3003016:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3002212-3002362:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3001620-3001804:-1:exon

SLC25A25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SLC25A25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding mitochondrial carrier protein SCaMC-2 isoform X1
translation: MPGARRSLASPVVSGVLCPCGSPHGSAVESGGGGGGGNAGSCGRSVCEASDQDRRLRTLFQKLDVNRDGALCIHDLAVGLGRLGLHRTELDLRKIVKAGDKDLDGQLDFEEFVHYLQDHEKKLRLVFKSLDKKNDGRIDAQEIVQSLRDLGVKISEQQAEKILKRIRTGHFWGPVTYMDKNGTMTIDWNEWRDYHLLHPVENIPEIILYWKHSTIFDVGENLTVPDEFTVEERQTGMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNNMCIIGGFTQMIREGGPRSLWRGNGINVLKIAPESAIKFMAYEQIKRFIGTDQEMLRIHERLLAGSLAGAIAQSSIYPMEVLKTRMALRKTGQYSGMLDCAKNILAKEGMAAFYKGYIPNMLGIIPYAGIDLAVYETLKNTWLQRYAVNSADPGVFVLLACGTISSTCGQLASYPLALVRTRMQAQASVEGAPEVTMRGLFKHILKTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLKMTLGVDSR
SIO_010081: SLC25A25
subclass of: SO_0000673
so part of: SLC25A25
location: complement(join(3001620..3001804,3002212..3002362,3002849..3003016,3003246..3003353,3003458..3003610,3004365..3004523,3005220..3005331,3005630..3005665,3006110..3006197,3006285..3006411,3025665..3025943))
location: region:3001620-3025943:-1
so has part: feature:3025665-3025943:-1:exon
so has part: feature:3006285-3006411:-1:exon
so has part: feature:3006110-3006197:-1:exon
so has part: feature:3005630-3005665:-1:exon
so has part: feature:3005220-3005331:-1:exon
so has part: feature:3004365-3004523:-1:exon
so has part: feature:3003458-3003610:-1:exon
so has part: feature:3003246-3003353:-1:exon
so has part: feature:3002849-3003016:-1:exon
so has part: feature:3002212-3002362:-1:exon
so has part: feature:3001620-3001804:-1:exon

XP_021407150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3025665-3025943:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3006285-3006411:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3006110-3006197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3005630-3005665:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3005220-3005331:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3004365-3004523:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3003458-3003610:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3003246-3003353:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3002849-3003016:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3002212-3002362:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3001620-3001804:-1:exon

SLC25A25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SLC25A25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding mitochondrial carrier protein SCaMC-2 isoform X7
translation: MLLNNPVFLLKPLSKIVKAGDKDLDGQLDFEEFVHYLQDHEKKLRLVFKSLDKKNDGRIDAQEIVQSLRDLGVKISEQQAEKILKRIRTGHFWGPVTYMDKNGTMTIDWNEWRDYHLLHPVENIPEIILYWKHSTIFDVGENLTVPDEFTVEERQTGMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNNMCIIGGFTQMIREGGPRSLWRGNGINVLKIAPESAIKFMAYEQIKRFIGTDQEMLRIHERLLAGSLAGAIAQSSIYPMEVLKTRMALRKTGQYSGMLDCAKNILAKEGMAAFYKGYIPNMLGIIPYAGIDLAVYETLKNTWLQRYAVNSADPGVFVLLACGTISSTCGQLASYPLALVRTRMQAQASVEGAPEVTMRGLFKHILKTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLKMTLGVDSR
SIO_010081: SLC25A25
subclass of: SO_0000673
so part of: SLC25A25
location: complement(join(3001620..3001804,3002212..3002362,3002849..3003016,3003246..3003353,3003458..3003610,3004365..3004523,3005220..3005331,3005630..3005665,3006110..3006197,3006285..3006411,3024028..3024069))
location: region:3001620-3024069:-1
so has part: feature:3024028-3024069:-1:exon
so has part: feature:3006285-3006411:-1:exon
so has part: feature:3006110-3006197:-1:exon
so has part: feature:3005630-3005665:-1:exon
so has part: feature:3005220-3005331:-1:exon
so has part: feature:3004365-3004523:-1:exon
so has part: feature:3003458-3003610:-1:exon
so has part: feature:3003246-3003353:-1:exon
so has part: feature:3002849-3003016:-1:exon
so has part: feature:3002212-3002362:-1:exon
so has part: feature:3001620-3001804:-1:exon

XP_021407156.1
type: Protein
SIO_000068: ncbiprotein

position:3024069:-1
position: 3024069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3024028-3024069:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3006285-3006411:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3006110-3006197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3005630-3005665:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3005220-3005331:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3004365-3004523:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3003458-3003610:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3003246-3003353:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3002849-3003016:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3002212-3002362:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3001620-3001804:-1:exon

SLC25A25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SLC25A25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding mitochondrial carrier protein SCaMC-2 isoform X7
translation: MLLNNPVFLLKPLSKIVKAGDKDLDGQLDFEEFVHYLQDHEKKLRLVFKSLDKKNDGRIDAQEIVQSLRDLGVKISEQQAEKILKRIRTGHFWGPVTYMDKNGTMTIDWNEWRDYHLLHPVENIPEIILYWKHSTIFDVGENLTVPDEFTVEERQTGMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNNMCIIGGFTQMIREGGPRSLWRGNGINVLKIAPESAIKFMAYEQIKRFIGTDQEMLRIHERLLAGSLAGAIAQSSIYPMEVLKTRMALRKTGQYSGMLDCAKNILAKEGMAAFYKGYIPNMLGIIPYAGIDLAVYETLKNTWLQRYAVNSADPGVFVLLACGTISSTCGQLASYPLALVRTRMQAQASVEGAPEVTMRGLFKHILKTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLKMTLGVDSR
SIO_010081: SLC25A25
subclass of: SO_0000673
so part of: SLC25A25
location: complement(join(3001620..3001804,3002212..3002362,3002849..3003016,3003246..3003353,3003458..3003610,3004365..3004523,3005220..3005331,3005630..3005665,3006110..3006197,3006285..3006411,3024028..3024069))
location: region:3001620-3024069:-1
so has part: feature:3024028-3024069:-1:exon
so has part: feature:3006285-3006411:-1:exon
so has part: feature:3006110-3006197:-1:exon
so has part: feature:3005630-3005665:-1:exon
so has part: feature:3005220-3005331:-1:exon
so has part: feature:3004365-3004523:-1:exon
so has part: feature:3003458-3003610:-1:exon
so has part: feature:3003246-3003353:-1:exon
so has part: feature:3002849-3003016:-1:exon
so has part: feature:3002212-3002362:-1:exon
so has part: feature:3001620-3001804:-1:exon

XP_021407157.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3024028-3024069:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3006285-3006411:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3006110-3006197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3005630-3005665:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3005220-3005331:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3004365-3004523:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3003458-3003610:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3003246-3003353:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3002849-3003016:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3002212-3002362:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3001620-3001804:-1:exon

SLC25A25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SLC25A25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding mitochondrial carrier protein SCaMC-2 isoform X4
translation: MLAGAAMLQTLWHFLSSFLPRAICQGPADEKEDEARNTTPLPGPGEKGPKVLGKTQDRGTDPTERRPTILLVVGPAEHFPKKIVKAGDKDLDGQLDFEEFVHYLQDHEKKLRLVFKSLDKKNDGRIDAQEIVQSLRDLGVKISEQQAEKILKSMDKNGTMTIDWNEWRDYHLLHPVENIPEIILYWKHSTIFDVGENLTVPDEFTVEERQTGMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNNMCIIGGFTQMIREGGPRSLWRGNGINVLKIAPESAIKFMAYEQIKRFIGTDQEMLRIHERLLAGSLAGAIAQSSIYPMEVLKTRMALRKTGQYSGMLDCAKNILAKEGMAAFYKGYIPNMLGIIPYAGIDLAVYETLKNTWLQRYAVNSADPGVFVLLACGTISSTCGQLASYPLALVRTRMQAQASVEGAPEVTMRGLFKHILKTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLKMTLGVDSR
SIO_010081: SLC25A25
subclass of: SO_0000673
so part of: SLC25A25
location: complement(join(3001620..3001804,3002212..3002362,3002849..3003016,3003246..3003353,3003458..3003610,3004365..3004523,3005220..3005331,3006110..3006197,3006285..3006411,3014659..3014901))
location: region:3001620-3014901:-1
so has part: feature:3014659-3014901:-1:exon
so has part: feature:3006285-3006411:-1:exon
so has part: feature:3006110-3006197:-1:exon
so has part: feature:3005220-3005331:-1:exon
so has part: feature:3004365-3004523:-1:exon
so has part: feature:3003458-3003610:-1:exon
so has part: feature:3003246-3003353:-1:exon
so has part: feature:3002849-3003016:-1:exon
so has part: feature:3002212-3002362:-1:exon
so has part: feature:3001620-3001804:-1:exon

XP_021407153.1
type: Protein
SIO_000068: ncbiprotein

position:3014901:-1
position: 3014901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3014659-3014901:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3006285-3006411:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3006110-3006197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3005220-3005331:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3004365-3004523:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3003458-3003610:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3003246-3003353:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3002849-3003016:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3002212-3002362:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3001620-3001804:-1:exon

SLC25A25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SLC25A25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding mitochondrial carrier protein SCaMC-2 isoform X3
translation: MLAGAAMLQTLWHFLSSFLPRAICQGPADEKEDEARNTTPLPGPGEKGPKVLGKTQDRGTDPTERRPTILLVVGPAEHFPKKIVKAGDKDLDGQLDFEEFVHYLQDHEKKLRLVFKSLDKKNDGRIDAQEIVQSLRDLGVKISEQQAEKILKRIRTGHFWGPVTYMDKNGTMTIDWNEWRDYHLLHPVENIPEIILYWKHSTIFDVGENLTVPDEFTVEERQTGMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNNMCIIGGFTQMIREGGPRSLWRGNGINVLKIAPESAIKFMAYEQIKRFIGTDQEMLRIHERLLAGSLAGAIAQSSIYPMEVLKTRMALRKTGQYSGMLDCAKNILAKEGMAAFYKGYIPNMLGIIPYAGIDLAVYETLKNTWLQRYAVNSADPGVFVLLACGTISSTCGQLASYPLALVRTRMQAQASVEGAPEVTMRGLFKHILKTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLKMTLGVDSR
SIO_010081: SLC25A25
subclass of: SO_0000673
so part of: SLC25A25
location: complement(join(3001620..3001804,3002212..3002362,3002849..3003016,3003246..3003353,3003458..3003610,3004365..3004523,3005220..3005331,3005630..3005665,3006110..3006197,3006285..3006411,3014659..3014901))
location: region:3001620-3014901:-1
so has part: feature:3014659-3014901:-1:exon
so has part: feature:3006285-3006411:-1:exon
so has part: feature:3006110-3006197:-1:exon
so has part: feature:3005630-3005665:-1:exon
so has part: feature:3005220-3005331:-1:exon
so has part: feature:3004365-3004523:-1:exon
so has part: feature:3003458-3003610:-1:exon
so has part: feature:3003246-3003353:-1:exon
so has part: feature:3002849-3003016:-1:exon
so has part: feature:3002212-3002362:-1:exon
so has part: feature:3001620-3001804:-1:exon

XP_021407152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3014659-3014901:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3006285-3006411:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3006110-3006197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3005630-3005665:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3005220-3005331:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3004365-3004523:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3003458-3003610:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3003246-3003353:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3002849-3003016:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3002212-3002362:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3001620-3001804:-1:exon

SLC25A25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SLC25A25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding mitochondrial carrier protein SCaMC-2 isoform X6
translation: MLCLCLYVPVFGERQAEFEYFESKGLPAELKSIFRLSLLIPSQEFSTYRQWKQKIVKAGDKDLDGQLDFEEFVHYLQDHEKKLRLVFKSLDKKNDGRIDAQEIVQSLRDLGVKISEQQAEKILKSMDKNGTMTIDWNEWRDYHLLHPVENIPEIILYWKHSTIFDVGENLTVPDEFTVEERQTGMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNNMCIIGGFTQMIREGGPRSLWRGNGINVLKIAPESAIKFMAYEQIKRFIGTDQEMLRIHERLLAGSLAGAIAQSSIYPMEVLKTRMALRKTGQYSGMLDCAKNILAKEGMAAFYKGYIPNMLGIIPYAGIDLAVYETLKNTWLQRYAVNSADPGVFVLLACGTISSTCGQLASYPLALVRTRMQAQASVEGAPEVTMRGLFKHILKTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLKMTLGVDSR
SIO_010081: SLC25A25
subclass of: SO_0000673
so part of: SLC25A25
location: complement(join(3001620..3001804,3002212..3002362,3002849..3003016,3003246..3003353,3003458..3003610,3004365..3004523,3005220..3005331,3006110..3006197,3006285..3006411,3008922..3009080))
location: region:3001620-3009080:-1
so has part: feature:3008922-3009080:-1:exon
so has part: feature:3006285-3006411:-1:exon
so has part: feature:3006110-3006197:-1:exon
so has part: feature:3005220-3005331:-1:exon
so has part: feature:3004365-3004523:-1:exon
so has part: feature:3003458-3003610:-1:exon
so has part: feature:3003246-3003353:-1:exon
so has part: feature:3002849-3003016:-1:exon
so has part: feature:3002212-3002362:-1:exon
so has part: feature:3001620-3001804:-1:exon

XP_021407155.1
type: Protein
SIO_000068: ncbiprotein

position:3009080:-1
position: 3009080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3008922-3009080:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3006285-3006411:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3006110-3006197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3005220-3005331:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3004365-3004523:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3003458-3003610:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3003246-3003353:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3002849-3003016:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3002212-3002362:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3001620-3001804:-1:exon

SLC25A25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SLC25A25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding mitochondrial carrier protein SCaMC-2 isoform X5
translation: MLCLCLYVPVFGERQAEFEYFESKGLPAELKSIFRLSLLIPSQEFSTYRQWKQKIVKAGDKDLDGQLDFEEFVHYLQDHEKKLRLVFKSLDKKNDGRIDAQEIVQSLRDLGVKISEQQAEKILKRIRTGHFWGPVTYMDKNGTMTIDWNEWRDYHLLHPVENIPEIILYWKHSTIFDVGENLTVPDEFTVEERQTGMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQVHASRSNNMCIIGGFTQMIREGGPRSLWRGNGINVLKIAPESAIKFMAYEQIKRFIGTDQEMLRIHERLLAGSLAGAIAQSSIYPMEVLKTRMALRKTGQYSGMLDCAKNILAKEGMAAFYKGYIPNMLGIIPYAGIDLAVYETLKNTWLQRYAVNSADPGVFVLLACGTISSTCGQLASYPLALVRTRMQAQASVEGAPEVTMRGLFKHILKTEGAFGLYRGLAPNFMKVIPAVSISYVVYENLKMTLGVDSR
SIO_010081: SLC25A25
subclass of: SO_0000673
so part of: SLC25A25
location: complement(join(3001620..3001804,3002212..3002362,3002849..3003016,3003246..3003353,3003458..3003610,3004365..3004523,3005220..3005331,3005630..3005665,3006110..3006197,3006285..3006411,3008922..3009080))
location: region:3001620-3009080:-1
so has part: feature:3008922-3009080:-1:exon
so has part: feature:3006285-3006411:-1:exon
so has part: feature:3006110-3006197:-1:exon
so has part: feature:3005630-3005665:-1:exon
so has part: feature:3005220-3005331:-1:exon
so has part: feature:3004365-3004523:-1:exon
so has part: feature:3003458-3003610:-1:exon
so has part: feature:3003246-3003353:-1:exon
so has part: feature:3002849-3003016:-1:exon
so has part: feature:3002212-3002362:-1:exon
so has part: feature:3001620-3001804:-1:exon

XP_021407154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3008922-3009080:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3006285-3006411:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3006110-3006197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3005630-3005665:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3005220-3005331:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3004365-3004523:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3003458-3003610:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3003246-3003353:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3002849-3003016:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3002212-3002362:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3001620-3001804:-1:exon

NAIF1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: NAIF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3026755..3030736
location: region:3026755-3030736:1
so has part: feature:3026755-3030736:1:exon
subclass of: SO_0000010

110482225
type: Gene
SIO_000068: ncbigene

position:3026755:1
position: 3026755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3030736:1
position: 3030736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3026755-3030736:1:exon

NAIF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: NAIF1
product: nuclear apoptosis inducing factor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_021551316.1
SIO_010081: NAIF1
subclass of: SO_0000673
so part of: NAIF1
location: join(3026755..3027357,3028198..3028647,3029204..3030736)
location: region:3026755-3030736:1
so has part: feature:3026755-3027357:1:exon
so has part: feature:3028198-3028647:1:exon
so has part: feature:3029204-3030736:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3026755-3027357:1:exon

position:3027357:1
position: 3027357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3028198-3028647:1:exon

position:3028198:1
position: 3028198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3028647:1
position: 3028647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3029204-3030736:1:exon

position:3029204:1
position: 3029204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NAIF1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 299123
gene: NAIF1
product: nuclear apoptosis inducing factor 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002467381.1
SIO_010081: NAIF1
so part of: NAIF1
location: join(3026755..3027357,3028198..3028647,3029204..3029271,3029531..3030736)
location: region:3026755-3030736:1
so has part: feature:3026755-3027357:1:exon
so has part: feature:3028198-3028647:1:exon
so has part: feature:3029204-3029271:1:exon
so has part: feature:3029531-3030736:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3026755-3027357:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3028198-3028647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3029204-3029271:1:exon

position:3029271:1
position: 3029271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3029531-3030736:1:exon

position:3029531:1
position: 3029531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NAIF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: NAIF1
product: nuclear apoptosis inducing factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021551314.1
SIO_010081: NAIF1
subclass of: SO_0000673
so part of: NAIF1
location: join(3026755..3027357,3028198..3028647,3029212..3030736)
location: region:3026755-3030736:1
so has part: feature:3026755-3027357:1:exon
so has part: feature:3028198-3028647:1:exon
so has part: feature:3029212-3030736:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3026755-3027357:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3028198-3028647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3029212-3030736:1:exon

position:3029212:1
position: 3029212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NAIF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: NAIF1
product: nuclear apoptosis inducing factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 3 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021551313.1
SIO_010081: NAIF1
subclass of: SO_0000673
so part of: NAIF1
location: join(3026755..3027357,3028198..3028661)
location: region:3026755-3028661:1
so has part: feature:3026755-3027357:1:exon
so has part: feature:3028198-3028661:1:exon

position:3028661:1
position: 3028661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3026755-3027357:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3028198-3028661:1:exon

NAIF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: NAIF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear apoptosis-inducing factor 1 isoform X2
translation: MAMASPPAPPAKKRKMNFSEREVEIIVEELERGKHLLVNHFNAGVPLAAKAAAWHDILRRVNAVATCHRELPEVKKKWSDLKTEVRRKVAQVRAAMEGGGESQNGGGNGPEGEDPAGGAAAPVILTPMQQRICNLLGEATIISLPSGDCGVGDGSDIPITASATTVTLTQIPAETTYHSLEDGVVEYCTTEAPTTVTAEAPLEMMAHQHEVSAKPQELKSRIALNSAKLLQEQRVTNLHVKEIAQHLEQQNDLLQMIRRSQEVQACAQERQAQAMEGTQAALSALIQVLRPMIKDFRRFLQSNTPSPSVTTDPGQTGQQDAFN
SIO_010081: NAIF1
subclass of: SO_0000673
so part of: NAIF1
location: join(3026847..3027357,3028198..3028647,3029212..3029222)
location: region:3026847-3029222:1
so has part: feature:3026847-3027357:1:exon
so has part: feature:3028198-3028647:1:exon
so has part: feature:3029212-3029222:1:exon

XP_021406989.1
type: Protein
SIO_000068: ncbiprotein

position:3026847:1
position: 3026847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3029222:1
position: 3029222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3026847-3027357:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3028198-3028647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3029212-3029222:1:exon

NAIF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: NAIF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear apoptosis-inducing factor 1 isoform X3
translation: MAMASPPAPPAKKRKMNFSEREVEIIVEELERGKHLLVNHFNAGVPLAAKAAAWHDILRRVNAVATCHRELPEVKKKWSDLKTEVRRKVAQVRAAMEGGGESQNGGGNGPEGEDPAGGAAAPVILTPMQQRICNLLGEATIISLPSGDCGVGDGSDIPITASATTVTLTQIPAETTYHSLEDGVVEYCTTEAPTTVTAEAPLEMMAHQHEVSAKPQELKSRIALNSAKLLQEQRVTNLHVKEIAQHLEQQNDLLQMIRRSQEVQACAQERQAQAMEGTQAALSALIQVLRPMIKDFRRFLQSNTPSPSVTTDPGQTGQQDDL
SIO_010081: NAIF1
subclass of: SO_0000673
so part of: NAIF1
location: join(3026847..3027357,3028198..3028647,3029204..3029211)
location: region:3026847-3029211:1
so has part: feature:3026847-3027357:1:exon
so has part: feature:3028198-3028647:1:exon
so has part: feature:3029204-3029211:1:exon

XP_021406991.1
type: Protein
SIO_000068: ncbiprotein

position:3029211:1
position: 3029211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3026847-3027357:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3028198-3028647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3029204-3029211:1:exon

NAIF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: NAIF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear apoptosis-inducing factor 1 isoform X1
translation: MAMASPPAPPAKKRKMNFSEREVEIIVEELERGKHLLVNHFNAGVPLAAKAAAWHDILRRVNAVATCHRELPEVKKKWSDLKTEVRRKVAQVRAAMEGGGESQNGGGNGPEGEDPAGGAAAPVILTPMQQRICNLLGEATIISLPSGDCGVGDGSDIPITASATTVTLTQIPAETTYHSLEDGVVEYCTTEAPTTVTAEAPLEMMAHQHEVSAKPQELKSRIALNSAKLLQEQRVTNLHVKEIAQHLEQQNDLLQMIRRSQEVQACAQERQAQAMEGTQAALSALIQVLRPMIKDFRRFLQSNTPSPSVTTDPGQTGQQDGMIQ
SIO_010081: NAIF1
subclass of: SO_0000673
so part of: NAIF1
location: join(3026847..3027357,3028198..3028661)
location: region:3026847-3028661:1
so has part: feature:3026847-3027357:1:exon
so has part: feature:3028198-3028661:1:exon

XP_021406988.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3026847-3027357:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3028198-3028661:1:exon

FAM102A
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: FAM102A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3036868..3074230
location: region:3036868-3074230:1
so has part: feature:3036868-3074230:1:exon
subclass of: SO_0000010

110482236
type: Gene
SIO_000068: ncbigene

position:3036868:1
position: 3036868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3074230:1
position: 3074230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3036868-3074230:1:exon

FAM102A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: FAM102A
product: family with sequence similarity 102 member A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021551354.2
SIO_010081: FAM102A
subclass of: SO_0000673
so part of: FAM102A
location: join(3036868..3037060,3038703..3039396,3057843..3057963,3058285..3058314,3061814..3061930,3062396..3062442,3064923..3065074,3066208..3066312,3066560..3066749,3066938..3067059,3068155..3068224,3069083..3074230)
location: region:3036868-3074230:1
so has part: feature:3036868-3037060:1:exon
so has part: feature:3038703-3039396:1:exon
so has part: feature:3057843-3057963:1:exon
so has part: feature:3058285-3058314:1:exon
so has part: feature:3061814-3061930:1:exon
so has part: feature:3062396-3062442:1:exon
so has part: feature:3064923-3065074:1:exon
so has part: feature:3066208-3066312:1:exon
so has part: feature:3066560-3066749:1:exon
so has part: feature:3066938-3067059:1:exon
so has part: feature:3068155-3068224:1:exon
so has part: feature:3069083-3074230:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3036868-3037060:1:exon

position:3037060:1
position: 3037060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3038703-3039396:1:exon

position:3038703:1
position: 3038703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3039396:1
position: 3039396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3057843-3057963:1:exon

position:3057843:1
position: 3057843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3057963:1
position: 3057963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3058285-3058314:1:exon

position:3058285:1
position: 3058285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3058314:1
position: 3058314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3061814-3061930:1:exon

position:3061814:1
position: 3061814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3061930:1
position: 3061930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3062396-3062442:1:exon

position:3062396:1
position: 3062396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3062442:1
position: 3062442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3064923-3065074:1:exon

position:3064923:1
position: 3064923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3065074:1
position: 3065074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3066208-3066312:1:exon

position:3066208:1
position: 3066208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3066312:1
position: 3066312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3066560-3066749:1:exon

position:3066560:1
position: 3066560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3066749:1
position: 3066749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3066938-3067059:1:exon

position:3066938:1
position: 3066938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3067059:1
position: 3067059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3068155-3068224:1:exon

position:3068155:1
position: 3068155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3068224:1
position: 3068224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3069083-3074230:1:exon

position:3069083:1
position: 3069083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FAM102A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: FAM102A
product: family with sequence similarity 102 member A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_021551353.2
SIO_010081: FAM102A
subclass of: SO_0000673
so part of: FAM102A
location: join(3036868..3037060,3038767..3039396,3057843..3057963,3058285..3058314,3061814..3061930,3062396..3062442,3064923..3065074,3066208..3066312,3066560..3066749,3066938..3067059,3068155..3068224,3069083..3074230)
location: region:3036868-3074230:1
so has part: feature:3036868-3037060:1:exon
so has part: feature:3038767-3039396:1:exon
so has part: feature:3057843-3057963:1:exon
so has part: feature:3058285-3058314:1:exon
so has part: feature:3061814-3061930:1:exon
so has part: feature:3062396-3062442:1:exon
so has part: feature:3064923-3065074:1:exon
so has part: feature:3066208-3066312:1:exon
so has part: feature:3066560-3066749:1:exon
so has part: feature:3066938-3067059:1:exon
so has part: feature:3068155-3068224:1:exon
so has part: feature:3069083-3074230:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3036868-3037060:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3038767-3039396:1:exon

position:3038767:1
position: 3038767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3057843-3057963:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3058285-3058314:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3061814-3061930:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3062396-3062442:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3064923-3065074:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3066208-3066312:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3066560-3066749:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3066938-3067059:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3068155-3068224:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3069083-3074230:1:exon

FAM102A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: FAM102A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM102A
translation: MAFLMKKKKFKFQTSFTLEELTAVPFVNGVLFCKIRLLDGGDFASLSSREEVQENCVRWKKKFTFVCKMSANPATGLLDPCICRVSVRKELKGGKTYSKLGFADLNLAEFAGSGSTVRCCLLEGYDTKNTRQDNSILKVTIGMSLLSGDPCFKTPPSTAKSITIPGQDSTLQLTCKGEGTTSSSSSSTIGSLRQAKPRTAILSSGVPEESDQNLSSPEEVFHSGHSRNSSYASQQSKISGYSTEHSRSSSMSDLTHRRNTSTSSSASGGLSMTVEYPEGEREHKLEKPPRPPRPPLLLDRPSRRKKDSMESHPTRVDDTRIDADDIVEKIMQSQDFTDVSNTEDSNLRLFVSRDGTTTLSGIQLGNRVSSGVYEPVVIETH
SIO_010081: FAM102A
subclass of: SO_0000673
so part of: FAM102A
location: join(3039251..3039396,3057843..3057963,3058285..3058314,3061814..3061930,3062396..3062442,3064923..3065074,3066208..3066312,3066560..3066749,3066938..3067059,3068155..3068224,3069083..3069128)
location: region:3039251-3069128:1
so has part: feature:3039251-3039396:1:exon
so has part: feature:3057843-3057963:1:exon
so has part: feature:3058285-3058314:1:exon
so has part: feature:3061814-3061930:1:exon
so has part: feature:3062396-3062442:1:exon
so has part: feature:3064923-3065074:1:exon
so has part: feature:3066208-3066312:1:exon
so has part: feature:3066560-3066749:1:exon
so has part: feature:3066938-3067059:1:exon
so has part: feature:3068155-3068224:1:exon
so has part: feature:3069083-3069128:1:exon

XP_021407028.1
type: Protein
SIO_000068: ncbiprotein

position:3039251:1
position: 3039251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3069128:1
position: 3069128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3039251-3039396:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3057843-3057963:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3058285-3058314:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3061814-3061930:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3062396-3062442:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3064923-3065074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3066208-3066312:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3066560-3066749:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3066938-3067059:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3068155-3068224:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3069083-3069128:1:exon

FAM102A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: FAM102A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM102A
translation: MAFLMKKKKFKFQTSFTLEELTAVPFVNGVLFCKIRLLDGGDFASLSSREEVQENCVRWKKKFTFVCKMSANPATGLLDPCICRVSVRKELKGGKTYSKLGFADLNLAEFAGSGSTVRCCLLEGYDTKNTRQDNSILKVTIGMSLLSGDPCFKTPPSTAKSITIPGQDSTLQLTCKGEGTTSSSSSSTIGSLRQAKPRTAILSSGVPEESDQNLSSPEEVFHSGHSRNSSYASQQSKISGYSTEHSRSSSMSDLTHRRNTSTSSSASGGLSMTVEYPEGEREHKLEKPPRPPRPPLLLDRPSRRKKDSMESHPTRVDDTRIDADDIVEKIMQSQDFTDVSNTEDSNLRLFVSRDGTTTLSGIQLGNRVSSGVYEPVVIETH
SIO_010081: FAM102A
subclass of: SO_0000673
so part of: FAM102A
location: join(3039251..3039396,3057843..3057963,3058285..3058314,3061814..3061930,3062396..3062442,3064923..3065074,3066208..3066312,3066560..3066749,3066938..3067059,3068155..3068224,3069083..3069128)
location: region:3039251-3069128:1
so has part: feature:3039251-3039396:1:exon
so has part: feature:3057843-3057963:1:exon
so has part: feature:3058285-3058314:1:exon
so has part: feature:3061814-3061930:1:exon
so has part: feature:3062396-3062442:1:exon
so has part: feature:3064923-3065074:1:exon
so has part: feature:3066208-3066312:1:exon
so has part: feature:3066560-3066749:1:exon
so has part: feature:3066938-3067059:1:exon
so has part: feature:3068155-3068224:1:exon
so has part: feature:3069083-3069128:1:exon

XP_021407029.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3039251-3039396:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3057843-3057963:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3058285-3058314:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3061814-3061930:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3062396-3062442:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3064923-3065074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3066208-3066312:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3066560-3066749:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3066938-3067059:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3068155-3068224:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3069083-3069128:1:exon

DPM2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: DPM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3069648..3078634
location: region:3069648-3078634:1
so has part: feature:3069648-3078634:1:exon
subclass of: SO_0000010

110482246
type: Gene
SIO_000068: ncbigene

position:3069648:1
position: 3069648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3078634:1
position: 3078634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3069648-3078634:1:exon

DPM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: DPM2
product: dolichyl-phosphate mannosyltransferase subunit 2, regulatory
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs, 3 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021551371.2
SIO_010081: DPM2
subclass of: SO_0000673
so part of: DPM2
location: join(3069648..3069665,3075706..3075852,3076251..3076340,3077401..3077503,3077789..3078634)
location: region:3069648-3078634:1
so has part: feature:3069648-3069665:1:exon
so has part: feature:3075706-3075852:1:exon
so has part: feature:3076251-3076340:1:exon
so has part: feature:3077401-3077503:1:exon
so has part: feature:3077789-3078634:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3069648-3069665:1:exon

position:3069665:1
position: 3069665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3075706-3075852:1:exon

position:3075706:1
position: 3075706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3075852:1
position: 3075852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3076251-3076340:1:exon

position:3076251:1
position: 3076251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3076340:1
position: 3076340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3077401-3077503:1:exon

position:3077401:1
position: 3077401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3077503:1
position: 3077503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3077789-3078634:1:exon

position:3077789:1
position: 3077789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DPM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: DPM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dolichol phosphate-mannose biosynthesis regulatory protein
translation: MVLLNKVTGLGAGPRARPAHRRCRLAAPGAGLAGRSLIGGRAGKAGPAGGGGGAMATATDQLVGFGLVAFSLVLFVYYTLWIIVLPFIDSDHGIHQYFLPREYAVIIPVAAGLLLLLFIGVFIMFVMWKSRKHAKKSD
SIO_010081: DPM2
subclass of: SO_0000673
so part of: DPM2
location: join(3069648..3069665,3075706..3075852,3076251..3076340,3077401..3077503,3077789..3077847)
location: region:3069648-3077847:1
so has part: feature:3069648-3069665:1:exon
so has part: feature:3075706-3075852:1:exon
so has part: feature:3076251-3076340:1:exon
so has part: feature:3077401-3077503:1:exon
so has part: feature:3077789-3077847:1:exon

XP_021407046.2
type: Protein
SIO_000068: ncbiprotein

position:3077847:1
position: 3077847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3069648-3069665:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3075706-3075852:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3076251-3076340:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3077401-3077503:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3077789-3077847:1:exon

ST6GALNAC4
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: ST6GALNAC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3080113..3082266
location: region:3080113-3082266:1
so has part: feature:3080113-3082266:1:exon
subclass of: SO_0000010

110482257
type: Gene
SIO_000068: ncbigene

position:3080113:1
position: 3080113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3082266:1
position: 3082266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3080113-3082266:1:exon

ST6GALNAC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ST6GALNAC4
product: ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021551389.1
SIO_010081: ST6GALNAC4
subclass of: SO_0000673
so part of: ST6GALNAC4
location: join(3080113..3080177,3080423..3080587,3080740..3081380,3081461..3082266)
location: region:3080113-3082266:1
so has part: feature:3080113-3080177:1:exon
so has part: feature:3080423-3080587:1:exon
so has part: feature:3080740-3081380:1:exon
so has part: feature:3081461-3082266:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3080113-3080177:1:exon

position:3080177:1
position: 3080177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3080423-3080587:1:exon

position:3080423:1
position: 3080423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3080587:1
position: 3080587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3080740-3081380:1:exon

position:3080740:1
position: 3080740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3081380:1
position: 3081380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3081461-3082266:1:exon

position:3081461:1
position: 3081461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ST6GALNAC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ST6GALNAC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase
translation: MKMLVRLFLTLVCAVVAAVLYILLCYHGQPCCSAPGLRDSPTASSVRSFQGYSRVPDGKPLERALCRHCAIVSSSGQMLGSQLGRAIDGQECVLRMNHAPTSGYEQDVGARSTIRVVSHTSVPLLLGNQPYFFQQSQETLYFIWGPAKKMNREKMGSTYQALVKVMEKYPQLQIYTLTEEKMTYCDNIFQNETGKNRYCWLLRRPITYHLSPH
SIO_010081: ST6GALNAC4
subclass of: SO_0000673
so part of: ST6GALNAC4
location: join(3080166..3080177,3080423..3080587,3080740..3081204)
location: region:3080166-3081204:1
so has part: feature:3080166-3080177:1:exon
so has part: feature:3080423-3080587:1:exon
so has part: feature:3080740-3081204:1:exon

XP_021407064.1
type: Protein
SIO_000068: ncbiprotein

position:3080166:1
position: 3080166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3081204:1
position: 3081204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3080166-3080177:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3080423-3080587:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3080740-3081204:1:exon

ST6GALNAC6
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: ST6GALNAC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3083310..3086362
location: region:3083310-3086362:1
so has part: feature:3083310-3086362:1:exon
subclass of: SO_0000010

110482219
type: Gene
SIO_000068: ncbigene

position:3083310:1
position: 3083310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3086362:1
position: 3086362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3083310-3086362:1:exon

ST6GALNAC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ST6GALNAC6
product: ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021551303.2
SIO_010081: ST6GALNAC6
subclass of: SO_0000673
so part of: ST6GALNAC6
location: join(3083310..3083465,3083838..3083950,3084763..3084821,3084954..3085133,3085295..3085692,3085882..3085989,3086069..3086362)
location: region:3083310-3086362:1
so has part: feature:3083310-3083465:1:exon
so has part: feature:3083838-3083950:1:exon
so has part: feature:3084763-3084821:1:exon
so has part: feature:3084954-3085133:1:exon
so has part: feature:3085295-3085692:1:exon
so has part: feature:3085882-3085989:1:exon
so has part: feature:3086069-3086362:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3083310-3083465:1:exon

position:3083465:1
position: 3083465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3083838-3083950:1:exon

position:3083838:1
position: 3083838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3083950:1
position: 3083950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3084763-3084821:1:exon

position:3084763:1
position: 3084763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3084821:1
position: 3084821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3084954-3085133:1:exon

position:3084954:1
position: 3084954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3085133:1
position: 3085133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3085295-3085692:1:exon

position:3085295:1
position: 3085295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3085692:1
position: 3085692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3085882-3085989:1:exon

position:3085882:1
position: 3085882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3085989:1
position: 3085989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3086069-3086362:1:exon

position:3086069:1
position: 3086069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ST6GALNAC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ST6GALNAC6
product: ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021551304.2
SIO_010081: ST6GALNAC6
subclass of: SO_0000673
so part of: ST6GALNAC6
location: join(3083418..3083511,3083838..3083950,3084763..3084821,3084954..3085133,3085295..3085692,3085882..3085989,3086069..3086362)
location: region:3083418-3086362:1
so has part: feature:3083418-3083511:1:exon
so has part: feature:3083838-3083950:1:exon
so has part: feature:3084763-3084821:1:exon
so has part: feature:3084954-3085133:1:exon
so has part: feature:3085295-3085692:1:exon
so has part: feature:3085882-3085989:1:exon
so has part: feature:3086069-3086362:1:exon

position:3083418:1
position: 3083418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3083418-3083511:1:exon

position:3083511:1
position: 3083511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3083838-3083950:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3084763-3084821:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3084954-3085133:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3085295-3085692:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3085882-3085989:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3086069-3086362:1:exon

ST6GALNAC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ST6GALNAC6
product: ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021551306.2
SIO_010081: ST6GALNAC6
subclass of: SO_0000673
so part of: ST6GALNAC6
location: join(3083428..3083447,3083838..3083950,3084763..3084821,3084954..3085133,3085295..3085692,3085882..3085989,3086069..3086362)
location: region:3083428-3086362:1
so has part: feature:3083428-3083447:1:exon
so has part: feature:3083838-3083950:1:exon
so has part: feature:3084763-3084821:1:exon
so has part: feature:3084954-3085133:1:exon
so has part: feature:3085295-3085692:1:exon
so has part: feature:3085882-3085989:1:exon
so has part: feature:3086069-3086362:1:exon

position:3083428:1
position: 3083428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3083428-3083447:1:exon

position:3083447:1
position: 3083447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3083838-3083950:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3084763-3084821:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3084954-3085133:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3085295-3085692:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3085882-3085989:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3086069-3086362:1:exon

ST6GALNAC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ST6GALNAC6
product: ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021551307.2
SIO_010081: ST6GALNAC6
subclass of: SO_0000673
so part of: ST6GALNAC6
location: join(3083447..3083465,3084763..3084821,3084954..3085133,3085295..3085692,3085882..3085989,3086069..3086362)
location: region:3083447-3086362:1
so has part: feature:3083447-3083465:1:exon
so has part: feature:3084763-3084821:1:exon
so has part: feature:3084954-3085133:1:exon
so has part: feature:3085295-3085692:1:exon
so has part: feature:3085882-3085989:1:exon
so has part: feature:3086069-3086362:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3083447-3083465:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3084763-3084821:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3084954-3085133:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3085295-3085692:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3085882-3085989:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3086069-3086362:1:exon

ST6GALNAC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ST6GALNAC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
translation: MSGSTSQRAAALGVLFALIMLLIIYSSGNGSEVFPYSRLRGRARRPPDLKKWGVRSGYLPVCGNKTLTARCHQCVIVTSSSHLLGTHLGTAIDGAECTIRMNDAPTTGYSADVGNKTSFRVVAHSSLYRVLKRPQEFVNKTPETIFIFWGPPTKMQKSLLKIIQRVCASFPNMTAYVVSPGRMKQFDDLFRGETGKDREKSRSWLSTGWFTMVIAVELCDAIHVYGMVPPSYCGRHPPPRRLPYHYYEPKGPDECTTYIHNERSRRGNHHRFITEKRVFASWANLYNITFSHPTWT
SIO_010081: ST6GALNAC6
subclass of: SO_0000673
so part of: ST6GALNAC6
location: join(3084807..3084821,3084954..3085133,3085295..3085692,3085882..3085989,3086069..3086258)
location: region:3084807-3086258:1
so has part: feature:3084807-3084821:1:exon
so has part: feature:3084954-3085133:1:exon
so has part: feature:3085295-3085692:1:exon
so has part: feature:3085882-3085989:1:exon
so has part: feature:3086069-3086258:1:exon

XP_021406978.1
type: Protein
SIO_000068: ncbiprotein

position:3084807:1
position: 3084807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3086258:1
position: 3086258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3084807-3084821:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3084954-3085133:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3085295-3085692:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3085882-3085989:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3086069-3086258:1:exon

ST6GALNAC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ST6GALNAC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
translation: MSGSTSQRAAALGVLFALIMLLIIYSSGNGSEVFPYSRLRGRARRPPDLKKWGVRSGYLPVCGNKTLTARCHQCVIVTSSSHLLGTHLGTAIDGAECTIRMNDAPTTGYSADVGNKTSFRVVAHSSLYRVLKRPQEFVNKTPETIFIFWGPPTKMQKSLLKIIQRVCASFPNMTAYVVSPGRMKQFDDLFRGETGKDREKSRSWLSTGWFTMVIAVELCDAIHVYGMVPPSYCGRHPPPRRLPYHYYEPKGPDECTTYIHNERSRRGNHHRFITEKRVFASWANLYNITFSHPTWT
SIO_010081: ST6GALNAC6
subclass of: SO_0000673
so part of: ST6GALNAC6
location: join(3084807..3084821,3084954..3085133,3085295..3085692,3085882..3085989,3086069..3086258)
location: region:3084807-3086258:1
so has part: feature:3084807-3084821:1:exon
so has part: feature:3084954-3085133:1:exon
so has part: feature:3085295-3085692:1:exon
so has part: feature:3085882-3085989:1:exon
so has part: feature:3086069-3086258:1:exon

XP_021406979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3084807-3084821:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3084954-3085133:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3085295-3085692:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3085882-3085989:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3086069-3086258:1:exon

ST6GALNAC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ST6GALNAC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
translation: MSGSTSQRAAALGVLFALIMLLIIYSSGNGSEVFPYSRLRGRARRPPDLKKWGVRSGYLPVCGNKTLTARCHQCVIVTSSSHLLGTHLGTAIDGAECTIRMNDAPTTGYSADVGNKTSFRVVAHSSLYRVLKRPQEFVNKTPETIFIFWGPPTKMQKSLLKIIQRVCASFPNMTAYVVSPGRMKQFDDLFRGETGKDREKSRSWLSTGWFTMVIAVELCDAIHVYGMVPPSYCGRHPPPRRLPYHYYEPKGPDECTTYIHNERSRRGNHHRFITEKRVFASWANLYNITFSHPTWT
SIO_010081: ST6GALNAC6
subclass of: SO_0000673
so part of: ST6GALNAC6
location: join(3084807..3084821,3084954..3085133,3085295..3085692,3085882..3085989,3086069..3086258)
location: region:3084807-3086258:1
so has part: feature:3084807-3084821:1:exon
so has part: feature:3084954-3085133:1:exon
so has part: feature:3085295-3085692:1:exon
so has part: feature:3085882-3085989:1:exon
so has part: feature:3086069-3086258:1:exon

XP_021406981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3084807-3084821:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3084954-3085133:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3085295-3085692:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3085882-3085989:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3086069-3086258:1:exon

ST6GALNAC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ST6GALNAC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
translation: MSGSTSQRAAALGVLFALIMLLIIYSSGNGSEVFPYSRLRGRARRPPDLKKWGVRSGYLPVCGNKTLTARCHQCVIVTSSSHLLGTHLGTAIDGAECTIRMNDAPTTGYSADVGNKTSFRVVAHSSLYRVLKRPQEFVNKTPETIFIFWGPPTKMQKSLLKIIQRVCASFPNMTAYVVSPGRMKQFDDLFRGETGKDREKSRSWLSTGWFTMVIAVELCDAIHVYGMVPPSYCGRHPPPRRLPYHYYEPKGPDECTTYIHNERSRRGNHHRFITEKRVFASWANLYNITFSHPTWT
SIO_010081: ST6GALNAC6
subclass of: SO_0000673
so part of: ST6GALNAC6
location: join(3084807..3084821,3084954..3085133,3085295..3085692,3085882..3085989,3086069..3086258)
location: region:3084807-3086258:1
so has part: feature:3084807-3084821:1:exon
so has part: feature:3084954-3085133:1:exon
so has part: feature:3085295-3085692:1:exon
so has part: feature:3085882-3085989:1:exon
so has part: feature:3086069-3086258:1:exon

XP_021406982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3084807-3084821:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3084954-3085133:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3085295-3085692:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3085882-3085989:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3086069-3086258:1:exon

AK1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: AK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3088913..3094211
location: region:3088913-3094211:1
so has part: feature:3088913-3094211:1:exon
subclass of: SO_0000010

110482308
type: Gene
SIO_000068: ncbigene

position:3088913:1
position: 3088913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3094211:1
position: 3094211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3088913-3094211:1:exon

AK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: AK1
product: adenylate kinase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 23 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021551485.2
SIO_010081: AK1
subclass of: SO_0000673
so part of: AK1
location: join(3088913..3088986,3090223..3090316,3091356..3091391,3092512..3092675,3092875..3092991,3093519..3093710,3093990..3094211)
location: region:3088913-3094211:1
so has part: feature:3088913-3088986:1:exon
so has part: feature:3090223-3090316:1:exon
so has part: feature:3091356-3091391:1:exon
so has part: feature:3092512-3092675:1:exon
so has part: feature:3092875-3092991:1:exon
so has part: feature:3093519-3093710:1:exon
so has part: feature:3093990-3094211:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3088913-3088986:1:exon

position:3088986:1
position: 3088986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3090223-3090316:1:exon

position:3090223:1
position: 3090223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3090316:1
position: 3090316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3091356-3091391:1:exon

position:3091356:1
position: 3091356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3091391:1
position: 3091391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3092512-3092675:1:exon

position:3092512:1
position: 3092512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3092675:1
position: 3092675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3092875-3092991:1:exon

position:3092875:1
position: 3092875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3092991:1
position: 3092991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3093519-3093710:1:exon

position:3093519:1
position: 3093519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3093710:1
position: 3093710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3093990-3094211:1:exon

position:3093990:1
position: 3093990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: AK1
product: adenylate kinase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 26 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_021551483.1
SIO_010081: AK1
subclass of: SO_0000673
so part of: AK1
location: join(3088914..3088986,3090274..3090316,3091356..3091391,3092512..3092675,3092875..3092991,3093519..3093710,3093990..3094211)
location: region:3088914-3094211:1
so has part: feature:3088914-3088986:1:exon
so has part: feature:3090274-3090316:1:exon
so has part: feature:3091356-3091391:1:exon
so has part: feature:3092512-3092675:1:exon
so has part: feature:3092875-3092991:1:exon
so has part: feature:3093519-3093710:1:exon
so has part: feature:3093990-3094211:1:exon

position:3088914:1
position: 3088914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3088914-3088986:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3090274-3090316:1:exon

position:3090274:1
position: 3090274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3091356-3091391:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3092512-3092675:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3092875-3092991:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3093519-3093710:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3093990-3094211:1:exon

AK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: AK1
product: adenylate kinase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 25 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021551484.2
SIO_010081: AK1
subclass of: SO_0000673
so part of: AK1
location: join(3090028..3090077,3090274..3090316,3091356..3091391,3092512..3092675,3092875..3092991,3093519..3093710,3093990..3094211)
location: region:3090028-3094211:1
so has part: feature:3090028-3090077:1:exon
so has part: feature:3090274-3090316:1:exon
so has part: feature:3091356-3091391:1:exon
so has part: feature:3092512-3092675:1:exon
so has part: feature:3092875-3092991:1:exon
so has part: feature:3093519-3093710:1:exon
so has part: feature:3093990-3094211:1:exon

position:3090028:1
position: 3090028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3090028-3090077:1:exon

position:3090077:1
position: 3090077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3090274-3090316:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3091356-3091391:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3092512-3092675:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3092875-3092991:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3093519-3093710:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3093990-3094211:1:exon

AK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: AK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenylate kinase isoenzyme 1
translation: MSAEKLKQHKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSERGKKLQAIMEKGELVPLDTVLDMLRDAMVAKADVSKGFLIDGYPREVKQGEEFEKKIAPPTLLLYVDAGKDTMVKRLLKRGETSGRVDDNEETIKKRLETYYKATEPVIAFYQSRGIVRQLNAEGSVEEVFQQVCTHLDCL
SIO_010081: AK1
subclass of: SO_0000673
so part of: AK1
location: join(3090307..3090316,3091356..3091391,3092512..3092675,3092875..3092991,3093519..3093710,3093990..3094055)
location: region:3090307-3094055:1
so has part: feature:3090307-3090316:1:exon
so has part: feature:3091356-3091391:1:exon
so has part: feature:3092512-3092675:1:exon
so has part: feature:3092875-3092991:1:exon
so has part: feature:3093519-3093710:1:exon
so has part: feature:3093990-3094055:1:exon

XP_021407158.1
type: Protein
SIO_000068: ncbiprotein

position:3090307:1
position: 3090307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3094055:1
position: 3094055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3090307-3090316:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3091356-3091391:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3092512-3092675:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3092875-3092991:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3093519-3093710:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3093990-3094055:1:exon

AK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: AK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenylate kinase isoenzyme 1
translation: MSAEKLKQHKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSERGKKLQAIMEKGELVPLDTVLDMLRDAMVAKADVSKGFLIDGYPREVKQGEEFEKKIAPPTLLLYVDAGKDTMVKRLLKRGETSGRVDDNEETIKKRLETYYKATEPVIAFYQSRGIVRQLNAEGSVEEVFQQVCTHLDCL
SIO_010081: AK1
subclass of: SO_0000673
so part of: AK1
location: join(3090307..3090316,3091356..3091391,3092512..3092675,3092875..3092991,3093519..3093710,3093990..3094055)
location: region:3090307-3094055:1
so has part: feature:3090307-3090316:1:exon
so has part: feature:3091356-3091391:1:exon
so has part: feature:3092512-3092675:1:exon
so has part: feature:3092875-3092991:1:exon
so has part: feature:3093519-3093710:1:exon
so has part: feature:3093990-3094055:1:exon

XP_021407159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3090307-3090316:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3091356-3091391:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3092512-3092675:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3092875-3092991:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3093519-3093710:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3093990-3094055:1:exon

AK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: AK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenylate kinase isoenzyme 1
translation: MSAEKLKQHKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSERGKKLQAIMEKGELVPLDTVLDMLRDAMVAKADVSKGFLIDGYPREVKQGEEFEKKIAPPTLLLYVDAGKDTMVKRLLKRGETSGRVDDNEETIKKRLETYYKATEPVIAFYQSRGIVRQLNAEGSVEEVFQQVCTHLDCL
SIO_010081: AK1
subclass of: SO_0000673
so part of: AK1
location: join(3090307..3090316,3091356..3091391,3092512..3092675,3092875..3092991,3093519..3093710,3093990..3094055)
location: region:3090307-3094055:1
so has part: feature:3090307-3090316:1:exon
so has part: feature:3091356-3091391:1:exon
so has part: feature:3092512-3092675:1:exon
so has part: feature:3092875-3092991:1:exon
so has part: feature:3093519-3093710:1:exon
so has part: feature:3093990-3094055:1:exon

XP_021407160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3090307-3090316:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3091356-3091391:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3092512-3092675:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3092875-3092991:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3093519-3093710:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3093990-3094055:1:exon

ENG
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: ENG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3096770..3108173
location: region:3096770-3108173:1
so has part: feature:3096770-3108173:1:exon
subclass of: SO_0000010

110482248
type: Gene
SIO_000068: ncbigene

position:3096770:1
position: 3096770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3108173:1
position: 3108173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3096770-3108173:1:exon

ENG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ENG
product: endoglin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021551374.2
SIO_010081: ENG
subclass of: SO_0000673
so part of: ENG
location: join(3096770..3096904,3101056..3101213,3103367..3103501,3104085..3104247,3104437..3104593,3104764..3104893,3105137..3105308,3105392..3105534,3105663..3105800,3106069..3106113,3106216..3106326,3106419..3106664,3106873..3106936,3107032..3107133,3107540..3108173)
location: region:3096770-3108173:1
so has part: feature:3096770-3096904:1:exon
so has part: feature:3101056-3101213:1:exon
so has part: feature:3103367-3103501:1:exon
so has part: feature:3104085-3104247:1:exon
so has part: feature:3104437-3104593:1:exon
so has part: feature:3104764-3104893:1:exon
so has part: feature:3105137-3105308:1:exon
so has part: feature:3105392-3105534:1:exon
so has part: feature:3105663-3105800:1:exon
so has part: feature:3106069-3106113:1:exon
so has part: feature:3106216-3106326:1:exon
so has part: feature:3106419-3106664:1:exon
so has part: feature:3106873-3106936:1:exon
so has part: feature:3107032-3107133:1:exon
so has part: feature:3107540-3108173:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3096770-3096904:1:exon

position:3096904:1
position: 3096904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3101056-3101213:1:exon

position:3101056:1
position: 3101056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3101213:1
position: 3101213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3103367-3103501:1:exon

position:3103367:1
position: 3103367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3103501:1
position: 3103501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3104085-3104247:1:exon

position:3104085:1
position: 3104085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3104247:1
position: 3104247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3104437-3104593:1:exon

position:3104437:1
position: 3104437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3104593:1
position: 3104593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3104764-3104893:1:exon

position:3104764:1
position: 3104764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3104893:1
position: 3104893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3105137-3105308:1:exon

position:3105137:1
position: 3105137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3105308:1
position: 3105308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3105392-3105534:1:exon

position:3105392:1
position: 3105392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3105534:1
position: 3105534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3105663-3105800:1:exon

position:3105663:1
position: 3105663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3105800:1
position: 3105800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3106069-3106113:1:exon

position:3106069:1
position: 3106069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3106113:1
position: 3106113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3106216-3106326:1:exon

position:3106216:1
position: 3106216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3106326:1
position: 3106326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3106419-3106664:1:exon

position:3106419:1
position: 3106419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3106664:1
position: 3106664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3106873-3106936:1:exon

position:3106873:1
position: 3106873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3106936:1
position: 3106936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3107032-3107133:1:exon

position:3107032:1
position: 3107032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3107133:1
position: 3107133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3107540-3108173:1:exon

position:3107540:1
position: 3107540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ENG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ENG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoglin
translation: MGPRSVPLLPLLLALLGRPDPARAEGCDLQPVTSERPITLSYATSTVPRGCVSNSSMDTGHEVHILSVKWSEVSPVPLMVTVTPRADACGRPAVLILLCTRCSATITSPCSNLIIRTDAHLSPETIRAPNPEPPMVSSEGQLLAWALDTYGGITSYSELQDPRRVQLHLGEDASSPPECVPQEHFNAIQHLETEVFFHGVKGCSRSDAQSTGAAHIIHFQSEPSSSITEVNLSVSCAQNSTGNQILILQSKANFTWFLSSKCNIHLLVSGSYKMTLFPMVFPGMLLPDTEQDLIAKAFEKNYTVIASYSAIPASTHISLEIHEHEMVETPVTTTPIVITQPPDLPHQVLLTLKPWKCTDETMEIVIIRSYLEPIKDVVNITLRDISCQAEKNATHFMLKSPLSHCGTSLEGRGYANNELILSLAKDTVLRSVRVAFKCEIPRELFLRLFPTAAFEAPQTELEINKEAFVQASMRWMDHPADLQLKECWLLAAGREPLLLLQGGEARGAGVAVLEGPPSSHGRKIWRFRFTYTVPEGRHIPFSAILKCKAGLQNDTIFEKVLELTVKDAWRPLNYRGLGLAAVLGITFGAFLIGALLTAVLWYIYSHTRPISKLQPVSSTAPASESSSTNHSIGSTQSTPCSTSSMA
SIO_010081: ENG
subclass of: SO_0000673
so part of: ENG
location: join(3096847..3096904,3101056..3101213,3103367..3103501,3104085..3104247,3104437..3104593,3104764..3104893,3105137..3105308,3105392..3105534,3105663..3105800,3106069..3106113,3106216..3106326,3106419..3106664,3106873..3106936,3107032..3107133,3107540..3107658)
location: region:3096847-3107658:1
so has part: feature:3096847-3096904:1:exon
so has part: feature:3101056-3101213:1:exon
so has part: feature:3103367-3103501:1:exon
so has part: feature:3104085-3104247:1:exon
so has part: feature:3104437-3104593:1:exon
so has part: feature:3104764-3104893:1:exon
so has part: feature:3105137-3105308:1:exon
so has part: feature:3105392-3105534:1:exon
so has part: feature:3105663-3105800:1:exon
so has part: feature:3106069-3106113:1:exon
so has part: feature:3106216-3106326:1:exon
so has part: feature:3106419-3106664:1:exon
so has part: feature:3106873-3106936:1:exon
so has part: feature:3107032-3107133:1:exon
so has part: feature:3107540-3107658:1:exon

XP_021407049.1
type: Protein
SIO_000068: ncbiprotein

position:3096847:1
position: 3096847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3107658:1
position: 3107658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3096847-3096904:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3101056-3101213:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3103367-3103501:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3104085-3104247:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3104437-3104593:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3104764-3104893:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3105137-3105308:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3105392-3105534:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3105663-3105800:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3106069-3106113:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3106216-3106326:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3106419-3106664:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3106873-3106936:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3107032-3107133:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3107540-3107658:1:exon

FPGS
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: FPGS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3108025..3114285)
location: region:3108025-3114285:-1
so has part: feature:3108025-3114285:-1:exon
subclass of: SO_0000010

110482249
type: Gene
SIO_000068: ncbigene

position:3108025:-1
position: 3108025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3114285:-1
position: 3114285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3108025-3114285:-1:exon

FPGS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: FPGS
product: folylpolyglutamate synthase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 15 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021551376.1
SIO_010081: FPGS
subclass of: SO_0000673
so part of: FPGS
location: complement(join(3108025..3108916,3109013..3109079,3109389..3109464,3109566..3109716,3109836..3109934,3110014..3110161,3110236..3110313,3110413..3110515,3110617..3110678,3110953..3111030,3111123..3111237,3111313..3111377,3111492..3111545,3111651..3111779,3113511..3114285))
location: region:3108025-3114285:-1
so has part: feature:3113511-3114285:-1:exon
so has part: feature:3111651-3111779:-1:exon
so has part: feature:3111492-3111545:-1:exon
so has part: feature:3111313-3111377:-1:exon
so has part: feature:3111123-3111237:-1:exon
so has part: feature:3110953-3111030:-1:exon
so has part: feature:3110617-3110678:-1:exon
so has part: feature:3110413-3110515:-1:exon
so has part: feature:3110236-3110313:-1:exon
so has part: feature:3110014-3110161:-1:exon
so has part: feature:3109836-3109934:-1:exon
so has part: feature:3109566-3109716:-1:exon
so has part: feature:3109389-3109464:-1:exon
so has part: feature:3109013-3109079:-1:exon
so has part: feature:3108025-3108916:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3113511-3114285:-1:exon

position:3113511:-1
position: 3113511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3111651-3111779:-1:exon

position:3111651:-1
position: 3111651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3111779:-1
position: 3111779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3111492-3111545:-1:exon

position:3111492:-1
position: 3111492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3111545:-1
position: 3111545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3111313-3111377:-1:exon

position:3111313:-1
position: 3111313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3111377:-1
position: 3111377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3111123-3111237:-1:exon

position:3111123:-1
position: 3111123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3111237:-1
position: 3111237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3110953-3111030:-1:exon

position:3110953:-1
position: 3110953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3111030:-1
position: 3111030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3110617-3110678:-1:exon

position:3110617:-1
position: 3110617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3110678:-1
position: 3110678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3110413-3110515:-1:exon

position:3110413:-1
position: 3110413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3110515:-1
position: 3110515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3110236-3110313:-1:exon

position:3110236:-1
position: 3110236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3110313:-1
position: 3110313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3110014-3110161:-1:exon

position:3110014:-1
position: 3110014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3110161:-1
position: 3110161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3109836-3109934:-1:exon

position:3109836:-1
position: 3109836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3109934:-1
position: 3109934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3109566-3109716:-1:exon

position:3109566:-1
position: 3109566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3109716:-1
position: 3109716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3109389-3109464:-1:exon

position:3109389:-1
position: 3109389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3109464:-1
position: 3109464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3109013-3109079:-1:exon

position:3109013:-1
position: 3109013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3109079:-1
position: 3109079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3108025-3108916:-1:exon

position:3108916:-1
position: 3108916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FPGS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: FPGS
product: folylpolyglutamate synthase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 16 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021551375.1
SIO_010081: FPGS
subclass of: SO_0000673
so part of: FPGS
location: complement(join(3108025..3108916,3109013..3109079,3109389..3109464,3109566..3109716,3109836..3109934,3110014..3110161,3110236..3110313,3110413..3110515,3110617..3110678,3110953..3111030,3111123..3111237,3111313..3111377,3111492..3111545,3111651..3111779,3111888..3112595))
location: region:3108025-3112595:-1
so has part: feature:3111888-3112595:-1:exon
so has part: feature:3111651-3111779:-1:exon
so has part: feature:3111492-3111545:-1:exon
so has part: feature:3111313-3111377:-1:exon
so has part: feature:3111123-3111237:-1:exon
so has part: feature:3110953-3111030:-1:exon
so has part: feature:3110617-3110678:-1:exon
so has part: feature:3110413-3110515:-1:exon
so has part: feature:3110236-3110313:-1:exon
so has part: feature:3110014-3110161:-1:exon
so has part: feature:3109836-3109934:-1:exon
so has part: feature:3109566-3109716:-1:exon
so has part: feature:3109389-3109464:-1:exon
so has part: feature:3109013-3109079:-1:exon
so has part: feature:3108025-3108916:-1:exon

position:3112595:-1
position: 3112595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3111888-3112595:-1:exon

position:3111888:-1
position: 3111888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3111651-3111779:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3111492-3111545:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3111313-3111377:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3111123-3111237:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3110953-3111030:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3110617-3110678:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3110413-3110515:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3110236-3110313:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3110014-3110161:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3109836-3109934:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3109566-3109716:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3109389-3109464:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3109013-3109079:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3108025-3108916:-1:exon

FPGS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: FPGS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: folylpolyglutamate synthase, mitochondrial isoform X2
translation: MYEDAIRMLNTLQTNASYLEQVKRERGDPQAQLEAMQGFLERSGLKVEDLDRLNIIHVTGTKGKGSACAFTECILRNYGLKTGFYSSPHLVQVRERIRINGQPISKDLFSKYFWLVYNRLEETKDPAHASMPAYFRFLTIMAFHVFLQEKVDLAVVEVGIGGTYDCTNIIRAPVVCGVSSLGIDHTSILGDTMEKIAWQKGGIFKPGVPAFTVAQPERPLEVLRERAQERECPLYLCPELDDFEEGCRALELGLAGAHQRSNAALALQLARTWLQRCGCPGLGELKEVPPSTELLGRPVPLAPAFQLTDAMIQGLRDTEWLGRTQVLSHGPVTWYLDGAHTTSSIQACVRWFRQTALNQDKPHDGSEVRVLLFNATGDRDTAALLKLLVPCHFDYAVFCPNFTEVSVANNADQQNFNVTLENALTRCLENQRTWTRLLEEKVGQDPWLPSPLRVGGLLQPAPTRGSLLLVPPAPRPLNSPALVFPCLAQALRWVAQGRDPQLAAPTASGAQPHPAASSGAVLLREAAAVRVLVTGSLHLVGGALRLLEPALSQ
SIO_010081: FPGS
subclass of: SO_0000673
so part of: FPGS
location: complement(join(3108489..3108916,3109013..3109079,3109389..3109464,3109566..3109716,3109836..3109934,3110014..3110161,3110236..3110313,3110413..3110515,3110617..3110678,3110953..3111030,3111123..3111237,3111313..3111377,3111492..3111545,3111651..3111779,3113511..3113519))
location: region:3108489-3113519:-1
so has part: feature:3113511-3113519:-1:exon
so has part: feature:3111651-3111779:-1:exon
so has part: feature:3111492-3111545:-1:exon
so has part: feature:3111313-3111377:-1:exon
so has part: feature:3111123-3111237:-1:exon
so has part: feature:3110953-3111030:-1:exon
so has part: feature:3110617-3110678:-1:exon
so has part: feature:3110413-3110515:-1:exon
so has part: feature:3110236-3110313:-1:exon
so has part: feature:3110014-3110161:-1:exon
so has part: feature:3109836-3109934:-1:exon
so has part: feature:3109566-3109716:-1:exon
so has part: feature:3109389-3109464:-1:exon
so has part: feature:3109013-3109079:-1:exon
so has part: feature:3108489-3108916:-1:exon

XP_021407051.1
type: Protein
SIO_000068: ncbiprotein

position:3108489:-1
position: 3108489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3113519:-1
position: 3113519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3113511-3113519:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3111651-3111779:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3111492-3111545:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3111313-3111377:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3111123-3111237:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3110953-3111030:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3110617-3110678:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3110413-3110515:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3110236-3110313:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3110014-3110161:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3109836-3109934:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3109566-3109716:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3109389-3109464:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3109013-3109079:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3108489-3108916:-1:exon

FPGS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: FPGS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: folylpolyglutamate synthase, mitochondrial isoform X1
translation: MAEMLPAWVADGTAEETEPGGDAIRMLNTLQTNASYLEQVKRERGDPQAQLEAMQGFLERSGLKVEDLDRLNIIHVTGTKGKGSACAFTECILRNYGLKTGFYSSPHLVQVRERIRINGQPISKDLFSKYFWLVYNRLEETKDPAHASMPAYFRFLTIMAFHVFLQEKVDLAVVEVGIGGTYDCTNIIRAPVVCGVSSLGIDHTSILGDTMEKIAWQKGGIFKPGVPAFTVAQPERPLEVLRERAQERECPLYLCPELDDFEEGCRALELGLAGAHQRSNAALALQLARTWLQRCGCPGLGELKEVPPSTELLGRPVPLAPAFQLTDAMIQGLRDTEWLGRTQVLSHGPVTWYLDGAHTTSSIQACVRWFRQTALNQDKPHDGSEVRVLLFNATGDRDTAALLKLLVPCHFDYAVFCPNFTEVSVANNADQQNFNVTLENALTRCLENQRTWTRLLEEKVGQDPWLPSPLRVGGLLQPAPTRGSLLLVPPAPRPLNSPALVFPCLAQALRWVAQGRDPQLAAPTASGAQPHPAASSGAVLLREAAAVRVLVTGSLHLVGGALRLLEPALSQ
SIO_010081: FPGS
subclass of: SO_0000673
so part of: FPGS
location: complement(join(3108489..3108916,3109013..3109079,3109389..3109464,3109566..3109716,3109836..3109934,3110014..3110161,3110236..3110313,3110413..3110515,3110617..3110678,3110953..3111030,3111123..3111237,3111313..3111377,3111492..3111545,3111651..3111779,3111888..3111950))
location: region:3108489-3111950:-1
so has part: feature:3111888-3111950:-1:exon
so has part: feature:3111651-3111779:-1:exon
so has part: feature:3111492-3111545:-1:exon
so has part: feature:3111313-3111377:-1:exon
so has part: feature:3111123-3111237:-1:exon
so has part: feature:3110953-3111030:-1:exon
so has part: feature:3110617-3110678:-1:exon
so has part: feature:3110413-3110515:-1:exon
so has part: feature:3110236-3110313:-1:exon
so has part: feature:3110014-3110161:-1:exon
so has part: feature:3109836-3109934:-1:exon
so has part: feature:3109566-3109716:-1:exon
so has part: feature:3109389-3109464:-1:exon
so has part: feature:3109013-3109079:-1:exon
so has part: feature:3108489-3108916:-1:exon

XP_021407050.1
type: Protein
SIO_000068: ncbiprotein

position:3111950:-1
position: 3111950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3111888-3111950:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3111651-3111779:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3111492-3111545:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3111313-3111377:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3111123-3111237:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3110953-3111030:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3110617-3110678:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3110413-3110515:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3110236-3110313:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3110014-3110161:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3109836-3109934:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3109566-3109716:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3109389-3109464:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3109013-3109079:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3108489-3108916:-1:exon

CDK9
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: CDK9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3114446..3119411)
location: region:3114446-3119411:-1
so has part: feature:3114446-3119411:-1:exon
subclass of: SO_0000010

110482250
type: Gene
SIO_000068: ncbigene

position:3114446:-1
position: 3114446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3119411:-1
position: 3119411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3114446-3119411:-1:exon

CDK9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: CDK9
product: cyclin dependent kinase 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021551378.2
SIO_010081: CDK9
subclass of: SO_0000673
so part of: CDK9
location: complement(join(3114446..3115077,3115940..3116088,3116171..3116342,3116520..3116686,3118115..3118205,3118616..3118697,3119285..3119411))
location: region:3114446-3119411:-1
so has part: feature:3119285-3119411:-1:exon
so has part: feature:3118616-3118697:-1:exon
so has part: feature:3118115-3118205:-1:exon
so has part: feature:3116520-3116686:-1:exon
so has part: feature:3116171-3116342:-1:exon
so has part: feature:3115940-3116088:-1:exon
so has part: feature:3114446-3115077:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3119285-3119411:-1:exon

position:3119285:-1
position: 3119285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3118616-3118697:-1:exon

position:3118616:-1
position: 3118616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3118697:-1
position: 3118697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3118115-3118205:-1:exon

position:3118115:-1
position: 3118115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3118205:-1
position: 3118205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3116520-3116686:-1:exon

position:3116520:-1
position: 3116520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3116686:-1
position: 3116686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3116171-3116342:-1:exon

position:3116171:-1
position: 3116171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3116342:-1
position: 3116342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3115940-3116088:-1:exon

position:3115940:-1
position: 3115940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3116088:-1
position: 3116088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3114446-3115077:-1:exon

position:3115077:-1
position: 3115077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDK9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: CDK9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinase 9
translation: MAKQYDMVECPFCDEVSKYEKLAKIGQGTFGEVFKAKHRQTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNAHVKFTLSEIKKVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPNVDKYELYEKLDLPKGQKRKVKDRLKAYVKDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSDLKNMLSTHNQSMFEYLAPPRRRGGHMPQQPANQGRNPAATNQTEFDRVF
SIO_010081: CDK9
subclass of: SO_0000673
so part of: CDK9
location: complement(join(3114712..3115077,3115940..3116088,3116171..3116342,3116520..3116686,3118115..3118205,3118616..3118697,3119285..3119376))
location: region:3114712-3119376:-1
so has part: feature:3119285-3119376:-1:exon
so has part: feature:3118616-3118697:-1:exon
so has part: feature:3118115-3118205:-1:exon
so has part: feature:3116520-3116686:-1:exon
so has part: feature:3116171-3116342:-1:exon
so has part: feature:3115940-3116088:-1:exon
so has part: feature:3114712-3115077:-1:exon

XP_021407053.1
type: Protein
SIO_000068: ncbiprotein

position:3114712:-1
position: 3114712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3119376:-1
position: 3119376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3119285-3119376:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3118616-3118697:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3118115-3118205:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3116520-3116686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3116171-3116342:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3115940-3116088:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3114712-3115077:-1:exon

SH2D3C
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SH2D3C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3124076..3144471
location: region:3124076-3144471:1
so has part: feature:3124076-3144471:1:exon
subclass of: SO_0000010

110482253
type: Gene
SIO_000068: ncbigene

position:3124076:1
position: 3124076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3144471:1
position: 3144471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3124076-3144471:1:exon

SH2D3C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SH2D3C
product: SH2 domain containing 3C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021551380.2
SIO_010081: SH2D3C
subclass of: SO_0000673
so part of: SH2D3C
location: join(3124076..3124169,3127492..3127531,3137774..3137902,3138190..3138638,3140316..3140440,3140702..3141279,3141519..3141634,3141809..3141980,3142697..3142808,3143428..3143634,3143763..3144471)
location: region:3124076-3144471:1
so has part: feature:3124076-3124169:1:exon
so has part: feature:3127492-3127531:1:exon
so has part: feature:3137774-3137902:1:exon
so has part: feature:3138190-3138638:1:exon
so has part: feature:3140316-3140440:1:exon
so has part: feature:3140702-3141279:1:exon
so has part: feature:3141519-3141634:1:exon
so has part: feature:3141809-3141980:1:exon
so has part: feature:3142697-3142808:1:exon
so has part: feature:3143428-3143634:1:exon
so has part: feature:3143763-3144471:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3124076-3124169:1:exon

position:3124169:1
position: 3124169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3127492-3127531:1:exon

position:3127492:1
position: 3127492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3127531:1
position: 3127531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3137774-3137902:1:exon

position:3137774:1
position: 3137774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3137902:1
position: 3137902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3138190-3138638:1:exon

position:3138190:1
position: 3138190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3138638:1
position: 3138638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3140316-3140440:1:exon

position:3140316:1
position: 3140316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3140440:1
position: 3140440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3140702-3141279:1:exon

position:3140702:1
position: 3140702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3141279:1
position: 3141279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3141519-3141634:1:exon

position:3141519:1
position: 3141519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3141634:1
position: 3141634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3141809-3141980:1:exon

position:3141809:1
position: 3141809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3141980:1
position: 3141980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3142697-3142808:1:exon

position:3142697:1
position: 3142697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3142808:1
position: 3142808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3143428-3143634:1:exon

position:3143428:1
position: 3143428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3143634:1
position: 3143634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3143763-3144471:1:exon

position:3143763:1
position: 3143763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SH2D3C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SH2D3C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2 domain-containing protein 3C isoform X2
translation: MTALGRRFPTLGQGSHHDGLESGSEYVKFSKEKYILDSSPEKLHKELEEELKLSSTDLRSHAWYHGRIPREVSESLVQRNGDFLIRDSLTSLGDYVLTCRWRNEPLHFKINKVTVKSSDGHTHVQYLFEQESFDNVPALVRFYVGNRKAISEQSGAIIYCPINRTFPLRYLEASYGLANGKHGGPHSPSSQKGGHIKRRSITMTDGLTADKITRAEGCPTSVSLPHHRDIIRNCAVSVDQIQDLHSPMSPISENPASPAYSTVTRLKPHACQASGITPASPVIRRSSEPQLCHGNNSKPLPDPAHSSHSTPCHGYARASPSPSVNSYSDPDTGHYCQLHPSSPICRDRPAHDTKQLPTKSYVERLKVEEGQRGTVENSSGEAEAGQRLKAELDFKGFVPPTMETTSSFNPAAFQSLLIPLDNKPLEMTVLKKVKELLAEVDVKTLAKHITKVDCLVARILGVTVEMQRLMGVSSGMELLTLPHGHQLRLDLLERFHTMSIMIAVDILGCTGSTEERAALLHKTIQLAAELKSTMGNMFSFAAVMSALEMTQIARLEQTWMVLRQRHTEGAILYEKKLKPFLKSLNEGKEGPPLTNTTFPHIIPLVTLLERDEALTESPEPWEATDNSVEVVMAHLEAARMVAHHGGLYHTNAEVKLQGFQGKAELLEVFSTEFQLRLLWGSRGAESSQAERYEKFDKVLTALSHKLEPAVRFSEL
SIO_010081: SH2D3C
subclass of: SO_0000673
so part of: SH2D3C
location: join(3124126..3124169,3127492..3127531,3137774..3137902,3138190..3138638,3140316..3140440,3140702..3141279,3141519..3141634,3141809..3141980,3142697..3142808,3143428..3143634,3143763..3143938)
location: region:3124126-3143938:1
so has part: feature:3124126-3124169:1:exon
so has part: feature:3127492-3127531:1:exon
so has part: feature:3137774-3137902:1:exon
so has part: feature:3138190-3138638:1:exon
so has part: feature:3140316-3140440:1:exon
so has part: feature:3140702-3141279:1:exon
so has part: feature:3141519-3141634:1:exon
so has part: feature:3141809-3141980:1:exon
so has part: feature:3142697-3142808:1:exon
so has part: feature:3143428-3143634:1:exon
so has part: feature:3143763-3143938:1:exon

XP_021407055.1
type: Protein
SIO_000068: ncbiprotein

position:3124126:1
position: 3124126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3143938:1
position: 3143938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3124126-3124169:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3127492-3127531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3137774-3137902:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3138190-3138638:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3140316-3140440:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3140702-3141279:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3141519-3141634:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3141809-3141980:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3142697-3142808:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3143428-3143634:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3143763-3143938:1:exon

SH2D3C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SH2D3C
product: SH2 domain containing 3C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031506300.1
SIO_010081: SH2D3C
subclass of: SO_0000673
so part of: SH2D3C
location: join(3127330..3127531,3137774..3137902,3138190..3138638,3140316..3140440,3140702..3141279,3141519..3141634,3141809..3141980,3142697..3142808,3143428..3143634,3143763..3144471)
location: region:3127330-3144471:1
so has part: feature:3127330-3127531:1:exon
so has part: feature:3137774-3137902:1:exon
so has part: feature:3138190-3138638:1:exon
so has part: feature:3140316-3140440:1:exon
so has part: feature:3140702-3141279:1:exon
so has part: feature:3141519-3141634:1:exon
so has part: feature:3141809-3141980:1:exon
so has part: feature:3142697-3142808:1:exon
so has part: feature:3143428-3143634:1:exon
so has part: feature:3143763-3144471:1:exon

position:3127330:1
position: 3127330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3127330-3127531:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3137774-3137902:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3138190-3138638:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3140316-3140440:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3140702-3141279:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3141519-3141634:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3141809-3141980:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3142697-3142808:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3143428-3143634:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3143763-3144471:1:exon

SH2D3C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SH2D3C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2 domain-containing protein 3C isoform X1
translation: MSQLAALYLSVFIVSLPFSHHDGLESGSEYVKFSKEKYILDSSPEKLHKELEEELKLSSTDLRSHAWYHGRIPREVSESLVQRNGDFLIRDSLTSLGDYVLTCRWRNEPLHFKINKVTVKSSDGHTHVQYLFEQESFDNVPALVRFYVGNRKAISEQSGAIIYCPINRTFPLRYLEASYGLANGKHGGPHSPSSQKGGHIKRRSITMTDGLTADKITRAEGCPTSVSLPHHRDIIRNCAVSVDQIQDLHSPMSPISENPASPAYSTVTRLKPHACQASGITPASPVIRRSSEPQLCHGNNSKPLPDPAHSSHSTPCHGYARASPSPSVNSYSDPDTGHYCQLHPSSPICRDRPAHDTKQLPTKSYVERLKVEEGQRGTVENSSGEAEAGQRLKAELDFKGFVPPTMETTSSFNPAAFQSLLIPLDNKPLEMTVLKKVKELLAEVDVKTLAKHITKVDCLVARILGVTVEMQRLMGVSSGMELLTLPHGHQLRLDLLERFHTMSIMIAVDILGCTGSTEERAALLHKTIQLAAELKSTMGNMFSFAAVMSALEMTQIARLEQTWMVLRQRHTEGAILYEKKLKPFLKSLNEGKEGPPLTNTTFPHIIPLVTLLERDEALTESPEPWEATDNSVEVVMAHLEAARMVAHHGGLYHTNAEVKLQGFQGKAELLEVFSTEFQLRLLWGSRGAESSQAERYEKFDKVLTALSHKLEPAVRFSEL
SIO_010081: SH2D3C
subclass of: SO_0000673
so part of: SH2D3C
location: join(3127436..3127531,3137774..3137902,3138190..3138638,3140316..3140440,3140702..3141279,3141519..3141634,3141809..3141980,3142697..3142808,3143428..3143634,3143763..3143938)
location: region:3127436-3143938:1
so has part: feature:3127436-3127531:1:exon
so has part: feature:3137774-3137902:1:exon
so has part: feature:3138190-3138638:1:exon
so has part: feature:3140316-3140440:1:exon
so has part: feature:3140702-3141279:1:exon
so has part: feature:3141519-3141634:1:exon
so has part: feature:3141809-3141980:1:exon
so has part: feature:3142697-3142808:1:exon
so has part: feature:3143428-3143634:1:exon
so has part: feature:3143763-3143938:1:exon

XP_031362160.1
type: Protein
SIO_000068: ncbiprotein

position:3127436:1
position: 3127436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3127436-3127531:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3137774-3137902:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3138190-3138638:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3140316-3140440:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3140702-3141279:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3141519-3141634:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3141809-3141980:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3142697-3142808:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3143428-3143634:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3143763-3143938:1:exon

SH2D3C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SH2D3C
product: SH2 domain containing 3C, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 10 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021551381.2
SIO_010081: SH2D3C
subclass of: SO_0000673
so part of: SH2D3C
location: join(3131559..3131740,3137774..3137902,3138190..3138638,3140316..3140440,3140702..3141279,3141519..3141634,3141809..3141980,3142697..3142808,3143428..3143634,3143763..3144471)
location: region:3131559-3144471:1
so has part: feature:3131559-3131740:1:exon
so has part: feature:3137774-3137902:1:exon
so has part: feature:3138190-3138638:1:exon
so has part: feature:3140316-3140440:1:exon
so has part: feature:3140702-3141279:1:exon
so has part: feature:3141519-3141634:1:exon
so has part: feature:3141809-3141980:1:exon
so has part: feature:3142697-3142808:1:exon
so has part: feature:3143428-3143634:1:exon
so has part: feature:3143763-3144471:1:exon

position:3131559:1
position: 3131559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3131559-3131740:1:exon

position:3131740:1
position: 3131740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3137774-3137902:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3138190-3138638:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3140316-3140440:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3140702-3141279:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3141519-3141634:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3141809-3141980:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3142697-3142808:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3143428-3143634:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3143763-3144471:1:exon

SH2D3C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SH2D3C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2 domain-containing protein 3C isoform X3
translation: MTERCSLWSALSAAACCFYRGSFMQVQFSKEKYILDSSPEKLHKELEEELKLSSTDLRSHAWYHGRIPREVSESLVQRNGDFLIRDSLTSLGDYVLTCRWRNEPLHFKINKVTVKSSDGHTHVQYLFEQESFDNVPALVRFYVGNRKAISEQSGAIIYCPINRTFPLRYLEASYGLANGKHGGPHSPSSQKGGHIKRRSITMTDGLTADKITRAEGCPTSVSLPHHRDIIRNCAVSVDQIQDLHSPMSPISENPASPAYSTVTRLKPHACQASGITPASPVIRRSSEPQLCHGNNSKPLPDPAHSSHSTPCHGYARASPSPSVNSYSDPDTGHYCQLHPSSPICRDRPAHDTKQLPTKSYVERLKVEEGQRGTVENSSGEAEAGQRLKAELDFKGFVPPTMETTSSFNPAAFQSLLIPLDNKPLEMTVLKKVKELLAEVDVKTLAKHITKVDCLVARILGVTVEMQRLMGVSSGMELLTLPHGHQLRLDLLERFHTMSIMIAVDILGCTGSTEERAALLHKTIQLAAELKSTMGNMFSFAAVMSALEMTQIARLEQTWMVLRQRHTEGAILYEKKLKPFLKSLNEGKEGPPLTNTTFPHIIPLVTLLERDEALTESPEPWEATDNSVEVVMAHLEAARMVAHHGGLYHTNAEVKLQGFQGKAELLEVFSTEFQLRLLWGSRGAESSQAERYEKFDKVLTALSHKLEPAVRFSEL
SIO_010081: SH2D3C
subclass of: SO_0000673
so part of: SH2D3C
location: join(3131660..3131740,3137774..3137902,3138190..3138638,3140316..3140440,3140702..3141279,3141519..3141634,3141809..3141980,3142697..3142808,3143428..3143634,3143763..3143938)
location: region:3131660-3143938:1
so has part: feature:3131660-3131740:1:exon
so has part: feature:3137774-3137902:1:exon
so has part: feature:3138190-3138638:1:exon
so has part: feature:3140316-3140440:1:exon
so has part: feature:3140702-3141279:1:exon
so has part: feature:3141519-3141634:1:exon
so has part: feature:3141809-3141980:1:exon
so has part: feature:3142697-3142808:1:exon
so has part: feature:3143428-3143634:1:exon
so has part: feature:3143763-3143938:1:exon

XP_021407056.1
type: Protein
SIO_000068: ncbiprotein

position:3131660:1
position: 3131660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3131660-3131740:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3137774-3137902:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3138190-3138638:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3140316-3140440:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3140702-3141279:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3141519-3141634:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3141809-3141980:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3142697-3142808:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3143428-3143634:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3143763-3143938:1:exon

TOR2A
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TOR2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3145268..3149762
location: region:3145268-3149762:1
so has part: feature:3145268-3149762:1:exon
subclass of: SO_0000010

110482226
type: Gene
SIO_000068: ncbigene

position:3145268:1
position: 3145268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3149762:1
position: 3149762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3145268-3149762:1:exon

TOR2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TOR2A
product: torsin family 2 member A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021551317.1
SIO_010081: TOR2A
subclass of: SO_0000673
so part of: TOR2A
location: join(3145268..3145427,3145664..3145929,3147020..3147195,3147523..3147650,3148179..3149762)
location: region:3145268-3149762:1
so has part: feature:3145268-3145427:1:exon
so has part: feature:3145664-3145929:1:exon
so has part: feature:3147020-3147195:1:exon
so has part: feature:3147523-3147650:1:exon
so has part: feature:3148179-3149762:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3145268-3145427:1:exon

position:3145427:1
position: 3145427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3145664-3145929:1:exon

position:3145664:1
position: 3145664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3145929:1
position: 3145929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3147020-3147195:1:exon

position:3147020:1
position: 3147020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3147195:1
position: 3147195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3147523-3147650:1:exon

position:3147523:1
position: 3147523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3147650:1
position: 3147650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3148179-3149762:1:exon

position:3148179:1
position: 3148179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TOR2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TOR2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prosalusin isoform X1
translation: MAPGAAPAPVLLVLLAAAARPAAAWDLWALRCGFSADCECGFGPDLRGLEFDLATNVVGQPLVRQQVMKGVREFLENPNPVKPLVMSFHGSTGTGKTYVSSMLIRYLFQRGLQSPYVHHFSPIVHFPHAEQIEQYKESLKRWIQGNLTNCGRSAFLFDEMDKMHPGLIDVIIPFLGPSWVVYGTNYRKAIFIFISNAGGEQINNVTLALWRARKDREEISLQDLEPAISKAVFENPESGFWKSGIINEQLIDFVVPFLPLKHHHVKQCVVNELVQQGLEVRPSVIQEVADSIPYFPEEEKLFSSTGCKTVASRISFFF
SIO_010081: TOR2A
subclass of: SO_0000673
so part of: TOR2A
location: join(3145286..3145427,3145664..3145929,3147020..3147195,3147523..3147650,3148179..3148423)
location: region:3145286-3148423:1
so has part: feature:3145286-3145427:1:exon
so has part: feature:3145664-3145929:1:exon
so has part: feature:3147020-3147195:1:exon
so has part: feature:3147523-3147650:1:exon
so has part: feature:3148179-3148423:1:exon

XP_021406992.1
type: Protein
SIO_000068: ncbiprotein

position:3145286:1
position: 3145286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3148423:1
position: 3148423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3145286-3145427:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3145664-3145929:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3147020-3147195:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3147523-3147650:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3148179-3148423:1:exon

TOR2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TOR2A
product: torsin family 2 member A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021551318.1
SIO_010081: TOR2A
subclass of: SO_0000673
so part of: TOR2A
location: join(3145324..3145401,3145664..3145929,3147020..3147195,3147523..3147650,3148179..3149762)
location: region:3145324-3149762:1
so has part: feature:3145324-3145401:1:exon
so has part: feature:3145664-3145929:1:exon
so has part: feature:3147020-3147195:1:exon
so has part: feature:3147523-3147650:1:exon
so has part: feature:3148179-3149762:1:exon

position:3145324:1
position: 3145324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3145324-3145401:1:exon

position:3145401:1
position: 3145401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3145664-3145929:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3147020-3147195:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3147523-3147650:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3148179-3149762:1:exon

TOR2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TOR2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prosalusin isoform X2
translation: MKGVREFLENPNPVKPLVMSFHGSTGTGKTYVSSMLIRYLFQRGLQSPYVHHFSPIVHFPHAEQIEQYKESLKRWIQGNLTNCGRSAFLFDEMDKMHPGLIDVIIPFLGPSWVVYGTNYRKAIFIFISNAGGEQINNVTLALWRARKDREEISLQDLEPAISKAVFENPESGFWKSGIINEQLIDFVVPFLPLKHHHVKQCVVNELVQQGLEVRPSVIQEVADSIPYFPEEEKLFSSTGCKTVASRISFFF
SIO_010081: TOR2A
subclass of: SO_0000673
so part of: TOR2A
location: join(3145723..3145929,3147020..3147195,3147523..3147650,3148179..3148423)
location: region:3145723-3148423:1
so has part: feature:3145723-3145929:1:exon
so has part: feature:3147020-3147195:1:exon
so has part: feature:3147523-3147650:1:exon
so has part: feature:3148179-3148423:1:exon

XP_021406993.1
type: Protein
SIO_000068: ncbiprotein

position:3145723:1
position: 3145723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3145723-3145929:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3147020-3147195:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3147523-3147650:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3148179-3148423:1:exon

LOC116184232
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116184232
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3149203..3149886)
location: region:3149203-3149886:-1
so has part: feature:3149203-3149886:-1:exon
subclass of: SO_0000011

116184232
type: Gene
SIO_000068: ncbigene

position:3149203:-1
position: 3149203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3149886:-1
position: 3149886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3149203-3149886:-1:exon

LOC116184232
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC116184232
product: uncharacterized LOC116184232
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004148992.1
SIO_010081: LOC116184232
subclass of: SO_0000673
so part of: LOC116184232
location: complement(join(3149203..3149362,3149803..3149886))
location: region:3149203-3149886:-1
so has part: feature:3149803-3149886:-1:exon
so has part: feature:3149203-3149362:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3149803-3149886:-1:exon

position:3149803:-1
position: 3149803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3149203-3149362:-1:exon

position:3149362:-1
position: 3149362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PTRH1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: PTRH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3150177..3152630
location: region:3150177-3152630:1
so has part: feature:3150177-3152630:1:exon
subclass of: SO_0000010

110482247
type: Gene
SIO_000068: ncbigene

position:3150177:1
position: 3150177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3152630:1
position: 3152630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3150177-3152630:1:exon

PTRH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PTRH1
product: peptidyl-tRNA hydrolase 1 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021551372.2
SIO_010081: PTRH1
subclass of: SO_0000673
so part of: PTRH1
location: join(3150177..3150242,3150665..3150884,3151048..3151147,3151773..3151818,3152221..3152630)
location: region:3150177-3152630:1
so has part: feature:3150177-3150242:1:exon
so has part: feature:3150665-3150884:1:exon
so has part: feature:3151048-3151147:1:exon
so has part: feature:3151773-3151818:1:exon
so has part: feature:3152221-3152630:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3150177-3150242:1:exon

position:3150242:1
position: 3150242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3150665-3150884:1:exon

position:3150665:1
position: 3150665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3150884:1
position: 3150884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3151048-3151147:1:exon

position:3151048:1
position: 3151048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3151147:1
position: 3151147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3151773-3151818:1:exon

position:3151773:1
position: 3151773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3151818:1
position: 3151818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3152221-3152630:1:exon

position:3152221:1
position: 3152221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTRH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PTRH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable peptidyl-tRNA hydrolase
translation: MLAAEVAGRARALVGRAGPRAMVAGLGNYGLRGTRHSVGMEVLDQLARQLAVAEGWRVDKRCCADVAPATAHGLELVLLKPRRFMNLNGLSVASAAEIYSLGPKDIYLVHDDLDKALGKVAVKLGGSARGHNGVQSCISALHSNEMTRLRIGIGRPEGDVTVPSYVLSPFTAGEREKLEQILAQAVTCLLELIQSRASTEPGDRG
SIO_010081: PTRH1
subclass of: SO_0000673
so part of: PTRH1
location: join(3150177..3150242,3150665..3150884,3151048..3151147,3151773..3151818,3152221..3152406)
location: region:3150177-3152406:1
so has part: feature:3150177-3150242:1:exon
so has part: feature:3150665-3150884:1:exon
so has part: feature:3151048-3151147:1:exon
so has part: feature:3151773-3151818:1:exon
so has part: feature:3152221-3152406:1:exon

XP_021407047.2
type: Protein
SIO_000068: ncbiprotein

position:3152406:1
position: 3152406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3150177-3150242:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3150665-3150884:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3151048-3151147:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3151773-3151818:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3152221-3152406:1:exon

CERCAM
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: CERCAM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3153876..3160872)
location: region:3153876-3160872:-1
so has part: feature:3153876-3160872:-1:exon
subclass of: SO_0000010

110482213
type: Gene
SIO_000068: ncbigene

position:3153876:-1
position: 3153876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3160872:-1
position: 3160872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3153876-3160872:-1:exon

CERCAM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: CERCAM
product: cerebral endothelial cell adhesion molecule, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021551291.1
SIO_010081: CERCAM
subclass of: SO_0000673
so part of: CERCAM
location: complement(join(3153876..3154266,3154922..3155158,3156055..3156258,3156335..3156462,3156638..3156770,3156874..3156980,3157158..3157234,3157351..3157470,3157544..3157748,3157836..3157970,3158047..3158164,3158357..3158467,3160718..3160872))
location: region:3153876-3160872:-1
so has part: feature:3160718-3160872:-1:exon
so has part: feature:3158357-3158467:-1:exon
so has part: feature:3158047-3158164:-1:exon
so has part: feature:3157836-3157970:-1:exon
so has part: feature:3157544-3157748:-1:exon
so has part: feature:3157351-3157470:-1:exon
so has part: feature:3157158-3157234:-1:exon
so has part: feature:3156874-3156980:-1:exon
so has part: feature:3156638-3156770:-1:exon
so has part: feature:3156335-3156462:-1:exon
so has part: feature:3156055-3156258:-1:exon
so has part: feature:3154922-3155158:-1:exon
so has part: feature:3153876-3154266:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3160718-3160872:-1:exon

position:3160718:-1
position: 3160718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3158357-3158467:-1:exon

position:3158357:-1
position: 3158357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3158467:-1
position: 3158467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3158047-3158164:-1:exon

position:3158047:-1
position: 3158047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3158164:-1
position: 3158164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3157836-3157970:-1:exon

position:3157836:-1
position: 3157836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3157970:-1
position: 3157970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3157544-3157748:-1:exon

position:3157544:-1
position: 3157544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3157748:-1
position: 3157748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3157351-3157470:-1:exon

position:3157351:-1
position: 3157351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3157470:-1
position: 3157470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3157158-3157234:-1:exon

position:3157158:-1
position: 3157158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3157234:-1
position: 3157234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3156874-3156980:-1:exon

position:3156874:-1
position: 3156874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3156980:-1
position: 3156980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3156638-3156770:-1:exon

position:3156638:-1
position: 3156638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3156770:-1
position: 3156770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3156335-3156462:-1:exon

position:3156335:-1
position: 3156335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3156462:-1
position: 3156462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3156055-3156258:-1:exon

position:3156055:-1
position: 3156055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3156258:-1
position: 3156258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3154922-3155158:-1:exon

position:3154922:-1
position: 3154922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3155158:-1
position: 3155158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3153876-3154266:-1:exon

position:3154266:-1
position: 3154266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CERCAM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: CERCAM
product: cerebral endothelial cell adhesion molecule, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021551294.1
SIO_010081: CERCAM
subclass of: SO_0000673
so part of: CERCAM
location: complement(join(3153876..3154266,3154922..3155158,3156055..3156258,3156335..3156462,3156638..3156770,3156874..3156980,3157158..3157234,3157351..3157470,3157544..3157748,3157836..3157970,3158047..3158164,3158357..3158467,3160010..3160204))
location: region:3153876-3160204:-1
so has part: feature:3160010-3160204:-1:exon
so has part: feature:3158357-3158467:-1:exon
so has part: feature:3158047-3158164:-1:exon
so has part: feature:3157836-3157970:-1:exon
so has part: feature:3157544-3157748:-1:exon
so has part: feature:3157351-3157470:-1:exon
so has part: feature:3157158-3157234:-1:exon
so has part: feature:3156874-3156980:-1:exon
so has part: feature:3156638-3156770:-1:exon
so has part: feature:3156335-3156462:-1:exon
so has part: feature:3156055-3156258:-1:exon
so has part: feature:3154922-3155158:-1:exon
so has part: feature:3153876-3154266:-1:exon

position:3160204:-1
position: 3160204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3160010-3160204:-1:exon

position:3160010:-1
position: 3160010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3158357-3158467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3158047-3158164:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3157836-3157970:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3157544-3157748:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3157351-3157470:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3157158-3157234:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3156874-3156980:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3156638-3156770:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3156335-3156462:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3156055-3156258:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3154922-3155158:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3153876-3154266:-1:exon

CERCAM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: CERCAM
product: cerebral endothelial cell adhesion molecule, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021551290.1
SIO_010081: CERCAM
subclass of: SO_0000673
so part of: CERCAM
location: complement(join(3153876..3154266,3154922..3155158,3156055..3156258,3156335..3156462,3156638..3156770,3156874..3156980,3157158..3157234,3157351..3157470,3157544..3157748,3157836..3157970,3158047..3158164,3158357..3159211))
location: region:3153876-3159211:-1
so has part: feature:3158357-3159211:-1:exon
so has part: feature:3158047-3158164:-1:exon
so has part: feature:3157836-3157970:-1:exon
so has part: feature:3157544-3157748:-1:exon
so has part: feature:3157351-3157470:-1:exon
so has part: feature:3157158-3157234:-1:exon
so has part: feature:3156874-3156980:-1:exon
so has part: feature:3156638-3156770:-1:exon
so has part: feature:3156335-3156462:-1:exon
so has part: feature:3156055-3156258:-1:exon
so has part: feature:3154922-3155158:-1:exon
so has part: feature:3153876-3154266:-1:exon

position:3159211:-1
position: 3159211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3158357-3159211:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3158047-3158164:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3157836-3157970:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3157544-3157748:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3157351-3157470:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3157158-3157234:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3156874-3156980:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3156638-3156770:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3156335-3156462:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3156055-3156258:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3154922-3155158:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3153876-3154266:-1:exon

CERCAM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: CERCAM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive glycosyltransferase 25 family member 3 isoform X2
translation: MENSLGGHGSVGCATDHNSDNTTAMLQEWLGAVGKDYHSVAWKVQEEPSSYPDELGPKHWSDKRYENVMKLKQEALTYAREQQADYILFMDTDSILTNNQTLKFLMAQNKSVVAPMLDSQTFYSNFWCGITPQGYYRRTADYFPTKNRQRVGCFRVPMVYATFLIDLRKEETLQLAFYPPHPNYTWAFDDIIVFAYSCQEAGVEVHVCNQHHFGYINVPVKAHQTLEDDRANFVHLTLEAMVDGPPMQRSRHISLLPRPLTKMGFDEIFLINLVRRPDRRQRMLATLQELEIIPRVVDAVDGSTLNSTDIKVLGVDLLPGYYDPFSGRTLTKGEVGCFLSHYNIWKEIVSRRLERSVVFEDDVRFEAAFPARLQRLMEELEQAQQDWDLIYLGRKQVNDEDEAPVEGVRNLVVAGYSYWTLAYAISHRGARKLLATKPLSKMLPVDEYLPIMYDKHPNEDYKRHFSPRDLLVFSAHPLLVYPTHYAGDSNWLSDTETSTIWDDDAKKTDWVGSQKTLRDSRGSAGHLRSTARDEL
SIO_010081: CERCAM
subclass of: SO_0000673
so part of: CERCAM
location: complement(join(3154924..3155158,3156055..3156258,3156335..3156462,3156638..3156770,3156874..3156980,3157158..3157234,3157351..3157470,3157544..3157748,3157836..3157970,3158047..3158164,3158357..3158467,3160718..3160752))
location: region:3154924-3160752:-1
so has part: feature:3160718-3160752:-1:exon
so has part: feature:3158357-3158467:-1:exon
so has part: feature:3158047-3158164:-1:exon
so has part: feature:3157836-3157970:-1:exon
so has part: feature:3157544-3157748:-1:exon
so has part: feature:3157351-3157470:-1:exon
so has part: feature:3157158-3157234:-1:exon
so has part: feature:3156874-3156980:-1:exon
so has part: feature:3156638-3156770:-1:exon
so has part: feature:3156335-3156462:-1:exon
so has part: feature:3156055-3156258:-1:exon
so has part: feature:3154924-3155158:-1:exon

XP_021406966.1
type: Protein
SIO_000068: ncbiprotein

position:3154924:-1
position: 3154924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3160752:-1
position: 3160752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3160718-3160752:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3158357-3158467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3158047-3158164:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3157836-3157970:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3157544-3157748:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3157351-3157470:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3157158-3157234:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3156874-3156980:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3156638-3156770:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3156335-3156462:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3156055-3156258:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3154924-3155158:-1:exon

CERCAM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: CERCAM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive glycosyltransferase 25 family member 3 isoform X1
translation: MLCSQASLSLAQSFGTTSISSAGVRSWLFLKEDLQRLMSPHPRCATDHNSDNTTAMLQEWLGAVGKDYHSVAWKVQEEPSSYPDELGPKHWSDKRYENVMKLKQEALTYAREQQADYILFMDTDSILTNNQTLKFLMAQNKSVVAPMLDSQTFYSNFWCGITPQGYYRRTADYFPTKNRQRVGCFRVPMVYATFLIDLRKEETLQLAFYPPHPNYTWAFDDIIVFAYSCQEAGVEVHVCNQHHFGYINVPVKAHQTLEDDRANFVHLTLEAMVDGPPMQRSRHISLLPRPLTKMGFDEIFLINLVRRPDRRQRMLATLQELEIIPRVVDAVDGSTLNSTDIKVLGVDLLPGYYDPFSGRTLTKGEVGCFLSHYNIWKEIVSRRLERSVVFEDDVRFEAAFPARLQRLMEELEQAQQDWDLIYLGRKQVNDEDEAPVEGVRNLVVAGYSYWTLAYAISHRGARKLLATKPLSKMLPVDEYLPIMYDKHPNEDYKRHFSPRDLLVFSAHPLLVYPTHYAGDSNWLSDTETSTIWDDDAKKTDWVGSQKTLRDSRGSAGHLRSTARDEL
SIO_010081: CERCAM
subclass of: SO_0000673
so part of: CERCAM
location: complement(join(3154924..3155158,3156055..3156258,3156335..3156462,3156638..3156770,3156874..3156980,3157158..3157234,3157351..3157470,3157544..3157748,3157836..3157970,3158047..3158164,3158357..3158595))
location: region:3154924-3158595:-1
so has part: feature:3158357-3158595:-1:exon
so has part: feature:3158047-3158164:-1:exon
so has part: feature:3157836-3157970:-1:exon
so has part: feature:3157544-3157748:-1:exon
so has part: feature:3157351-3157470:-1:exon
so has part: feature:3157158-3157234:-1:exon
so has part: feature:3156874-3156980:-1:exon
so has part: feature:3156638-3156770:-1:exon
so has part: feature:3156335-3156462:-1:exon
so has part: feature:3156055-3156258:-1:exon
so has part: feature:3154924-3155158:-1:exon

XP_021406965.1
type: Protein
SIO_000068: ncbiprotein

position:3158595:-1
position: 3158595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3158357-3158595:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3158047-3158164:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3157836-3157970:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3157544-3157748:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3157351-3157470:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3157158-3157234:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3156874-3156980:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3156638-3156770:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3156335-3156462:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3156055-3156258:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3154924-3155158:-1:exon

CERCAM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: CERCAM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive glycosyltransferase 25 family member 3 isoform X3
translation: MLQEWLGAVGKDYHSVAWKVQEEPSSYPDELGPKHWSDKRYENVMKLKQEALTYAREQQADYILFMDTDSILTNNQTLKFLMAQNKSVVAPMLDSQTFYSNFWCGITPQGYYRRTADYFPTKNRQRVGCFRVPMVYATFLIDLRKEETLQLAFYPPHPNYTWAFDDIIVFAYSCQEAGVEVHVCNQHHFGYINVPVKAHQTLEDDRANFVHLTLEAMVDGPPMQRSRHISLLPRPLTKMGFDEIFLINLVRRPDRRQRMLATLQELEIIPRVVDAVDGSTLNSTDIKVLGVDLLPGYYDPFSGRTLTKGEVGCFLSHYNIWKEIVSRRLERSVVFEDDVRFEAAFPARLQRLMEELEQAQQDWDLIYLGRKQVNDEDEAPVEGVRNLVVAGYSYWTLAYAISHRGARKLLATKPLSKMLPVDEYLPIMYDKHPNEDYKRHFSPRDLLVFSAHPLLVYPTHYAGDSNWLSDTETSTIWDDDAKKTDWVGSQKTLRDSRGSAGHLRSTARDEL
SIO_010081: CERCAM
subclass of: SO_0000673
so part of: CERCAM
location: complement(join(3154924..3155158,3156055..3156258,3156335..3156462,3156638..3156770,3156874..3156980,3157158..3157234,3157351..3157470,3157544..3157748,3157836..3157970,3158047..3158164,3158357..3158430))
location: region:3154924-3158430:-1
so has part: feature:3158357-3158430:-1:exon
so has part: feature:3158047-3158164:-1:exon
so has part: feature:3157836-3157970:-1:exon
so has part: feature:3157544-3157748:-1:exon
so has part: feature:3157351-3157470:-1:exon
so has part: feature:3157158-3157234:-1:exon
so has part: feature:3156874-3156980:-1:exon
so has part: feature:3156638-3156770:-1:exon
so has part: feature:3156335-3156462:-1:exon
so has part: feature:3156055-3156258:-1:exon
so has part: feature:3154924-3155158:-1:exon

XP_021406969.1
type: Protein
SIO_000068: ncbiprotein

position:3158430:-1
position: 3158430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3158357-3158430:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3158047-3158164:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3157836-3157970:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3157544-3157748:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3157351-3157470:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3157158-3157234:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3156874-3156980:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3156638-3156770:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3156335-3156462:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3156055-3156258:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3154924-3155158:-1:exon

LOC116184222
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116184222
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3159247..3162761
location: region:3159247-3162761:1
so has part: feature:3159247-3162761:1:exon
subclass of: SO_0000011

116184222
type: Gene
SIO_000068: ncbigene

position:3159247:1
position: 3159247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3162761:1
position: 3162761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3159247-3162761:1:exon

LOC116184222
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC116184222
product: uncharacterized LOC116184222
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_004148980.1
SIO_010081: LOC116184222
subclass of: SO_0000673
so part of: LOC116184222
location: join(3159247..3159385,3162535..3162761)
location: region:3159247-3162761:1
so has part: feature:3159247-3159385:1:exon
so has part: feature:3162535-3162761:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3159247-3159385:1:exon

position:3159385:1
position: 3159385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3162535-3162761:1:exon

position:3162535:1
position: 3162535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

URM1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: URM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3172197..3188941)
location: region:3172197-3188941:-1
so has part: feature:3172197-3188941:-1:exon
subclass of: SO_0000010

110482243
type: Gene
SIO_000068: ncbigene

position:3172197:-1
position: 3172197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3188941:-1
position: 3188941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3172197-3188941:-1:exon

URM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: URM1
product: ubiquitin related modifier 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_021551366.2
SIO_010081: URM1
subclass of: SO_0000673
so part of: URM1
location: complement(join(3172197..3172464,3173176..3173224,3174229..3174310,3186190..3186260,3188863..3188941))
location: region:3172197-3188941:-1
so has part: feature:3188863-3188941:-1:exon
so has part: feature:3186190-3186260:-1:exon
so has part: feature:3174229-3174310:-1:exon
so has part: feature:3173176-3173224:-1:exon
so has part: feature:3172197-3172464:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3188863-3188941:-1:exon

position:3188863:-1
position: 3188863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3186190-3186260:-1:exon

position:3186190:-1
position: 3186190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3186260:-1
position: 3186260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3174229-3174310:-1:exon

position:3174229:-1
position: 3174229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3174310:-1
position: 3174310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3173176-3173224:-1:exon

position:3173176:-1
position: 3173176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3173224:-1
position: 3173224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3172197-3172464:-1:exon

position:3172464:-1
position: 3172464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

URM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: URM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-related modifier 1
translation: MAAPVSLQVEFGGGAELLFDGVKKHQVTLPCQPEPWDIRNLLKWIKQNLLKERPELFLQGESVRPGILVLINEADWELMGELDYKLQDQDNVLFISTLHGG
SIO_010081: URM1
subclass of: SO_0000673
so part of: URM1
location: complement(join(3172396..3172464,3173176..3173224,3174229..3174310,3186190..3186260,3188863..3188897))
location: region:3172396-3188897:-1
so has part: feature:3188863-3188897:-1:exon
so has part: feature:3186190-3186260:-1:exon
so has part: feature:3174229-3174310:-1:exon
so has part: feature:3173176-3173224:-1:exon
so has part: feature:3172396-3172464:-1:exon

XP_021407041.1
type: Protein
SIO_000068: ncbiprotein

position:3172396:-1
position: 3172396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3188897:-1
position: 3188897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3188863-3188897:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3186190-3186260:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3174229-3174310:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3173176-3173224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3172396-3172464:-1:exon

LOC116184210
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116184210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3172457..3173867
location: region:3172457-3173867:1
so has part: feature:3172457-3173867:1:exon
subclass of: SO_0000011

116184210
type: Gene
SIO_000068: ncbigene

position:3172457:1
position: 3172457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3173867:1
position: 3173867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3172457-3173867:1:exon

LOC116184210
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC116184210
product: uncharacterized LOC116184210
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004148967.1
SIO_010081: LOC116184210
subclass of: SO_0000673
so part of: LOC116184210
location: join(3172457..3172549,3173401..3173867)
location: region:3172457-3173867:1
so has part: feature:3172457-3172549:1:exon
so has part: feature:3173401-3173867:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3172457-3172549:1:exon

position:3172549:1
position: 3172549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3173401-3173867:1:exon

position:3173401:1
position: 3173401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC27A4
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SLC27A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3195644..3205468)
location: region:3195644-3205468:-1
so has part: feature:3195644-3205468:-1:exon
subclass of: SO_0000010

110482288
type: Gene
SIO_000068: ncbigene

position:3195644:-1
position: 3195644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3205468:-1
position: 3205468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3195644-3205468:-1:exon

SLC27A4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SLC27A4
product: solute carrier family 27 member 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021551440.2
SIO_010081: SLC27A4
subclass of: SO_0000673
so part of: SLC27A4
location: complement(join(3195644..3197332,3197579..3197725,3198135..3198299,3198458..3198595,3198773..3198899,3199125..3199334,3199750..3199859,3200379..3200470,3200577..3200646,3200987..3201145,3201840..3202234,3202890..3203056,3205369..3205468))
location: region:3195644-3205468:-1
so has part: feature:3205369-3205468:-1:exon
so has part: feature:3202890-3203056:-1:exon
so has part: feature:3201840-3202234:-1:exon
so has part: feature:3200987-3201145:-1:exon
so has part: feature:3200577-3200646:-1:exon
so has part: feature:3200379-3200470:-1:exon
so has part: feature:3199750-3199859:-1:exon
so has part: feature:3199125-3199334:-1:exon
so has part: feature:3198773-3198899:-1:exon
so has part: feature:3198458-3198595:-1:exon
so has part: feature:3198135-3198299:-1:exon
so has part: feature:3197579-3197725:-1:exon
so has part: feature:3195644-3197332:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3205369-3205468:-1:exon

position:3205369:-1
position: 3205369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3202890-3203056:-1:exon

position:3202890:-1
position: 3202890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3203056:-1
position: 3203056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3201840-3202234:-1:exon

position:3201840:-1
position: 3201840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3202234:-1
position: 3202234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3200987-3201145:-1:exon

position:3200987:-1
position: 3200987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3201145:-1
position: 3201145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3200577-3200646:-1:exon

position:3200577:-1
position: 3200577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3200646:-1
position: 3200646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3200379-3200470:-1:exon

position:3200379:-1
position: 3200379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3200470:-1
position: 3200470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3199750-3199859:-1:exon

position:3199750:-1
position: 3199750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3199859:-1
position: 3199859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3199125-3199334:-1:exon

position:3199125:-1
position: 3199125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3199334:-1
position: 3199334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3198773-3198899:-1:exon

position:3198773:-1
position: 3198773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3198899:-1
position: 3198899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3198458-3198595:-1:exon

position:3198458:-1
position: 3198458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3198595:-1
position: 3198595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3198135-3198299:-1:exon

position:3198135:-1
position: 3198135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3198299:-1
position: 3198299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3197579-3197725:-1:exon

position:3197579:-1
position: 3197579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3197725:-1
position: 3197725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3195644-3197332:-1:exon

position:3197332:-1
position: 3197332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC27A4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SLC27A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: long-chain fatty acid transport protein 4
translation: MLRLAAFAAVLLFLRVTLELSWAQAIPALFIFYLASGGWDFFLIFLKTIPRDFSTGLVLLRVKWQVWRHMREKNTIPKIFQKTARKYSEKTALIFQGTGESWTFRQLDEYSNQVANFFYSQGFRSGDVVALFMESRNQYVGLWLGLAKIGVETALVNSHLRLDALLHCIAISSSKAVVFGVEMMEAMQEVQPSLDKSIHLFWSGEENPKSVLPGAKHLDPLLQMAQRHQPAPPNKGFLDKLFYIYTSGTTGLPKAAIVVNCRYFRMSSLVFYGFRMRSDDVMYDCLPLYHAAGNIVGTGQCLLQGMTVVIRKKFSASHFWEDCVKYNCTIVQYIGEICRYLLNQPYQDTERQHRVRMAVGNGLRASIWREFMARFGIAQVAEFYGATECNCSLGNFDGNVGSCGFNSRILPGVHPIGLVKVDEDTMELIRGPDGVCISCKPGEPGQLVGRIVRSNPLQHFDGYLNQSATNKKIARDVFAKGDVAYLTGDVLVMDKYGYMYFRDRTGDTFRWKGENVSTTEVEGTLSRILNLTDVVVYGVEVPGVEGRAGMAAIADPGNSCDLEEFSSKLKKALPLYARPVFLRFLHEVSKTSTYKFQKTELRKQGFDPALVKDRLYFLDTRQGCYLPLDQAAFSRIKSGDQKL
SIO_010081: SLC27A4
subclass of: SO_0000673
so part of: SLC27A4
location: complement(join(3197175..3197332,3197579..3197725,3198135..3198299,3198458..3198595,3198773..3198899,3199125..3199334,3199750..3199859,3200379..3200470,3200577..3200646,3200987..3201145,3201840..3202234,3202890..3203050))
location: region:3197175-3203050:-1
so has part: feature:3202890-3203050:-1:exon
so has part: feature:3201840-3202234:-1:exon
so has part: feature:3200987-3201145:-1:exon
so has part: feature:3200577-3200646:-1:exon
so has part: feature:3200379-3200470:-1:exon
so has part: feature:3199750-3199859:-1:exon
so has part: feature:3199125-3199334:-1:exon
so has part: feature:3198773-3198899:-1:exon
so has part: feature:3198458-3198595:-1:exon
so has part: feature:3198135-3198299:-1:exon
so has part: feature:3197579-3197725:-1:exon
so has part: feature:3197175-3197332:-1:exon

XP_021407115.1
type: Protein
SIO_000068: ncbiprotein

position:3197175:-1
position: 3197175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3203050:-1
position: 3203050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3202890-3203050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3201840-3202234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3200987-3201145:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3200577-3200646:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3200379-3200470:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3199750-3199859:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3199125-3199334:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3198773-3198899:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3198458-3198595:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3198135-3198299:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3197579-3197725:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3197175-3197332:-1:exon

TRNAR-UCU
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TRNAR-UCU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 3205599..3205687
location: region:3205599-3205687:1
so has part: feature:3205599-3205687:1:exon
subclass of: SO_0000663

110482310
type: Gene
SIO_000068: ncbigene

position:3205599:1
position: 3205599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3205687:1
position: 3205687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3205599-3205687:1:exon

TRNAR-UCU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 299123
gene: TRNAR-UCU
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA arginine (anticodon UCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:3205632..3205634,aa:Arg,seq:tct)
SIO_010081: TRNAR-UCU
subclass of: SO_0000673
so part of: TRNAR-UCU
location: join(3205599..3205635,3205652..3205687)
location: region:3205599-3205687:1
so has part: feature:3205599-3205635:1:exon
so has part: feature:3205652-3205687:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3205599-3205635:1:exon

position:3205635:1
position: 3205635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3205652-3205687:1:exon

position:3205652:1
position: 3205652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COQ4
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: COQ4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3206708..3212134)
location: region:3206708-3212134:-1
so has part: feature:3206708-3212134:-1:exon
subclass of: SO_0000010

110482239
type: Gene
SIO_000068: ncbigene

position:3206708:-1
position: 3206708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3212134:-1
position: 3212134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3206708-3212134:-1:exon

COQ4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: COQ4
product: coenzyme Q4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021551358.2
SIO_010081: COQ4
subclass of: SO_0000673
so part of: COQ4
location: complement(join(3206708..3207889,3208450..3208543,3209344..3209473,3209582..3209684,3211238..3211334,3211783..3212134))
location: region:3206708-3212134:-1
so has part: feature:3211783-3212134:-1:exon
so has part: feature:3211238-3211334:-1:exon
so has part: feature:3209582-3209684:-1:exon
so has part: feature:3209344-3209473:-1:exon
so has part: feature:3208450-3208543:-1:exon
so has part: feature:3206708-3207889:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3211783-3212134:-1:exon

position:3211783:-1
position: 3211783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3211238-3211334:-1:exon

position:3211238:-1
position: 3211238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3211334:-1
position: 3211334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3209582-3209684:-1:exon

position:3209582:-1
position: 3209582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3209684:-1
position: 3209684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3209344-3209473:-1:exon

position:3209344:-1
position: 3209344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3209473:-1
position: 3209473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3208450-3208543:-1:exon

position:3208450:-1
position: 3208450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3208543:-1
position: 3208543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3206708-3207889:-1:exon

position:3207889:-1
position: 3207889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

COQ4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: COQ4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquinone biosynthesis protein COQ4 homolog, mitochondrial
translation: MRRLRAALPLLRAALPLLRAVPLPQAGASRHSPRSARASPSAGPLPHPLLPAGRARPSHSEPRGRHGRGEEQEQEEEEEDMGGWQQLYPGHIPTSPLQKALLAAGSAVMALYDPYRHDMVAVLGETTGCLALPNLRDKMKNHPEGYRILQERPRIRLSTLDMARLQGLPEGSLGREYVRFLEDNKVSPDTRMPPKFVDDEELAYVIMRYREVHDLMHTLLGMPTNMLGEVVVKWFEAVQTGLPMCVLGAAFGPVRLSTRKLQVLATELVPWAIRSGLNASCVLSVYYEQRWEQPVESLREELGIFPPPAVRV
SIO_010081: COQ4
subclass of: SO_0000673
so part of: COQ4
location: complement(join(3207727..3207889,3208450..3208543,3209344..3209473,3209582..3209684,3211238..3211334,3211783..3212134))
location: region:3207727-3212134:-1
so has part: feature:3211783-3212134:-1:exon
so has part: feature:3211238-3211334:-1:exon
so has part: feature:3209582-3209684:-1:exon
so has part: feature:3209344-3209473:-1:exon
so has part: feature:3208450-3208543:-1:exon
so has part: feature:3207727-3207889:-1:exon

XP_021407033.2
type: Protein
SIO_000068: ncbiprotein

position:3207727:-1
position: 3207727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3211783-3212134:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3211238-3211334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3209582-3209684:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3209344-3209473:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3208450-3208543:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3207727-3207889:-1:exon

TRUB2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TRUB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3212857..3220789
location: region:3212857-3220789:1
so has part: feature:3212857-3220789:1:exon
subclass of: SO_0000010

110482261
type: Gene
SIO_000068: ncbigene

position:3212857:1
position: 3212857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3220789:1
position: 3220789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3212857-3220789:1:exon

TRUB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TRUB2
product: TruB pseudouridine synthase family member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021551392.2
SIO_010081: TRUB2
subclass of: SO_0000673
so part of: TRUB2
location: join(3212857..3213064,3213166..3213240,3213742..3213803,3214122..3214203,3214731..3214803,3215254..3215390,3215978..3216343,3220706..3220789)
location: region:3212857-3220789:1
so has part: feature:3212857-3213064:1:exon
so has part: feature:3213166-3213240:1:exon
so has part: feature:3213742-3213803:1:exon
so has part: feature:3214122-3214203:1:exon
so has part: feature:3214731-3214803:1:exon
so has part: feature:3215254-3215390:1:exon
so has part: feature:3215978-3216343:1:exon
so has part: feature:3220706-3220789:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3212857-3213064:1:exon

position:3213064:1
position: 3213064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3213166-3213240:1:exon

position:3213166:1
position: 3213166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3213240:1
position: 3213240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3213742-3213803:1:exon

position:3213742:1
position: 3213742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3213803:1
position: 3213803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3214122-3214203:1:exon

position:3214122:1
position: 3214122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3214203:1
position: 3214203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3214731-3214803:1:exon

position:3214731:1
position: 3214731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3214803:1
position: 3214803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3215254-3215390:1:exon

position:3215254:1
position: 3215254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3215390:1
position: 3215390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3215978-3216343:1:exon

position:3215978:1
position: 3215978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3216343:1
position: 3216343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3220706-3220789:1:exon

position:3220706:1
position: 3220706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRUB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TRUB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial mRNA pseudouridine synthase TRUB2
translation: MAGPGPSHPRDSPAAPDSPFLPVSLSELNAAPGAAPRQRVRFLPTPAPGGGGAVELVAARVPVLADHPLVRGPRFRKLKIGAGHRLDVKASGVFVLGIGHGNKLLTDLYNCHLTKVYTVGGLFGKATDDFSDTGNLIEKTTFDHITREKLERILAVIQGTNQKALLMYSNIDMKTQEAYELAVKGLIRPMGKSPPIITAIRCLQFALPEFQLEIHCLHETQQYLRKMVHEIGLELKSSAVCTQVRRIRDGVFTVDDALPRTQWNLQSIQEAIRNCQLKVETELEKTLAHGEGQESSSSAGWGQLSMLCRSVHEQSLQHNTAATGQQCDGQQKERGLLRWLH
SIO_010081: TRUB2
subclass of: SO_0000673
so part of: TRUB2
location: join(3212857..3213064,3213166..3213240,3213742..3213803,3214122..3214203,3214731..3214803,3215254..3215390,3215978..3216343,3220706..3220728)
location: region:3212857-3220728:1
so has part: feature:3212857-3213064:1:exon
so has part: feature:3213166-3213240:1:exon
so has part: feature:3213742-3213803:1:exon
so has part: feature:3214122-3214203:1:exon
so has part: feature:3214731-3214803:1:exon
so has part: feature:3215254-3215390:1:exon
so has part: feature:3215978-3216343:1:exon
so has part: feature:3220706-3220728:1:exon

XP_021407067.2
type: Protein
SIO_000068: ncbiprotein

position:3220728:1
position: 3220728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3212857-3213064:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3213166-3213240:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3213742-3213803:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3214122-3214203:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3214731-3214803:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3215254-3215390:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3215978-3216343:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3220706-3220728:1:exon

GOLGA2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: GOLGA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3222410..3241356
location: region:3222410-3241356:1
so has part: feature:3222410-3241356:1:exon
subclass of: SO_0000010

110482232
type: Gene
SIO_000068: ncbigene

position:3222410:1
position: 3222410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3241356:1
position: 3241356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3222410-3241356:1:exon

GOLGA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: GOLGA2
product: golgin A2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021551346.1
SIO_010081: GOLGA2
subclass of: SO_0000673
so part of: GOLGA2
location: join(3222410..3222512,3223660..3223782,3224100..3224180,3227510..3227644,3228244..3228287,3228413..3228476,3228935..3228994,3229471..3229551,3231270..3231308,3231804..3231866,3232091..3232184,3232837..3232943,3233475..3233533,3233818..3233959,3234955..3235044,3235208..3235315,3235412..3235499,3235946..3236292,3237109..3237222,3237500..3237724,3237961..3238060,3238140..3238219,3238786..3238939,3239080..3239147,3239425..3239527,3239774..3239880,3240044..3240212,3240320..3241356)
location: region:3222410-3241356:1
so has part: feature:3222410-3222512:1:exon
so has part: feature:3223660-3223782:1:exon
so has part: feature:3224100-3224180:1:exon
so has part: feature:3227510-3227644:1:exon
so has part: feature:3228244-3228287:1:exon
so has part: feature:3228413-3228476:1:exon
so has part: feature:3228935-3228994:1:exon
so has part: feature:3229471-3229551:1:exon
so has part: feature:3231270-3231308:1:exon
so has part: feature:3231804-3231866:1:exon
so has part: feature:3232091-3232184:1:exon
so has part: feature:3232837-3232943:1:exon
so has part: feature:3233475-3233533:1:exon
so has part: feature:3233818-3233959:1:exon
so has part: feature:3234955-3235044:1:exon
so has part: feature:3235208-3235315:1:exon
so has part: feature:3235412-3235499:1:exon
so has part: feature:3235946-3236292:1:exon
so has part: feature:3237109-3237222:1:exon
so has part: feature:3237500-3237724:1:exon
so has part: feature:3237961-3238060:1:exon
so has part: feature:3238140-3238219:1:exon
so has part: feature:3238786-3238939:1:exon
so has part: feature:3239080-3239147:1:exon
so has part: feature:3239425-3239527:1:exon
so has part: feature:3239774-3239880:1:exon
so has part: feature:3240044-3240212:1:exon
so has part: feature:3240320-3241356:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3222410-3222512:1:exon

position:3222512:1
position: 3222512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3223660-3223782:1:exon

position:3223660:1
position: 3223660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3223782:1
position: 3223782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3224100-3224180:1:exon

position:3224100:1
position: 3224100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3224180:1
position: 3224180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3227510-3227644:1:exon

position:3227510:1
position: 3227510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3227644:1
position: 3227644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3228244-3228287:1:exon

position:3228244:1
position: 3228244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3228287:1
position: 3228287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3228413-3228476:1:exon

position:3228413:1
position: 3228413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3228476:1
position: 3228476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3228935-3228994:1:exon

position:3228935:1
position: 3228935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3228994:1
position: 3228994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3229471-3229551:1:exon

position:3229471:1
position: 3229471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3229551:1
position: 3229551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3231270-3231308:1:exon

position:3231270:1
position: 3231270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3231308:1
position: 3231308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3231804-3231866:1:exon

position:3231804:1
position: 3231804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3231866:1
position: 3231866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3232091-3232184:1:exon

position:3232091:1
position: 3232091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3232184:1
position: 3232184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3232837-3232943:1:exon

position:3232837:1
position: 3232837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3232943:1
position: 3232943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3233475-3233533:1:exon

position:3233475:1
position: 3233475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3233533:1
position: 3233533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3233818-3233959:1:exon

position:3233818:1
position: 3233818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3233959:1
position: 3233959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3234955-3235044:1:exon

position:3234955:1
position: 3234955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3235044:1
position: 3235044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3235208-3235315:1:exon

position:3235208:1
position: 3235208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3235315:1
position: 3235315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3235412-3235499:1:exon

position:3235412:1
position: 3235412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3235499:1
position: 3235499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3235946-3236292:1:exon

position:3235946:1
position: 3235946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3236292:1
position: 3236292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3237109-3237222:1:exon

position:3237109:1
position: 3237109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3237222:1
position: 3237222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3237500-3237724:1:exon

position:3237500:1
position: 3237500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3237724:1
position: 3237724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3237961-3238060:1:exon

position:3237961:1
position: 3237961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3238060:1
position: 3238060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3238140-3238219:1:exon

position:3238140:1
position: 3238140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3238219:1
position: 3238219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3238786-3238939:1:exon

position:3238786:1
position: 3238786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3238939:1
position: 3238939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3239080-3239147:1:exon

position:3239080:1
position: 3239080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3239147:1
position: 3239147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3239425-3239527:1:exon

position:3239425:1
position: 3239425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3239527:1
position: 3239527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3239774-3239880:1:exon

position:3239774:1
position: 3239774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3239880:1
position: 3239880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:3240044-3240212:1:exon

position:3240044:1
position: 3240044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3240212:1
position: 3240212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:3240320-3241356:1:exon

position:3240320:1
position: 3240320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GOLGA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: GOLGA2
product: golgin A2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021551347.1
SIO_010081: GOLGA2
subclass of: SO_0000673
so part of: GOLGA2
location: join(3222410..3222512,3223660..3223782,3224100..3224180,3227510..3227644,3228244..3228287,3228413..3228476,3228935..3228994,3229471..3229551,3231270..3231308,3231804..3231866,3232091..3232184,3232837..3232943,3233475..3233533,3233818..3233959,3234955..3235044,3235208..3235315,3235412..3235499,3235949..3236292,3237109..3237222,3237500..3237724,3237961..3238060,3238140..3238219,3238786..3238939,3239080..3239147,3239425..3239527,3239774..3239880,3240044..3240212,3240320..3241356)
location: region:3222410-3241356:1
so has part: feature:3222410-3222512:1:exon
so has part: feature:3223660-3223782:1:exon
so has part: feature:3224100-3224180:1:exon
so has part: feature:3227510-3227644:1:exon
so has part: feature:3228244-3228287:1:exon
so has part: feature:3228413-3228476:1:exon
so has part: feature:3228935-3228994:1:exon
so has part: feature:3229471-3229551:1:exon
so has part: feature:3231270-3231308:1:exon
so has part: feature:3231804-3231866:1:exon
so has part: feature:3232091-3232184:1:exon
so has part: feature:3232837-3232943:1:exon
so has part: feature:3233475-3233533:1:exon
so has part: feature:3233818-3233959:1:exon
so has part: feature:3234955-3235044:1:exon
so has part: feature:3235208-3235315:1:exon
so has part: feature:3235412-3235499:1:exon
so has part: feature:3235949-3236292:1:exon
so has part: feature:3237109-3237222:1:exon
so has part: feature:3237500-3237724:1:exon
so has part: feature:3237961-3238060:1:exon
so has part: feature:3238140-3238219:1:exon
so has part: feature:3238786-3238939:1:exon
so has part: feature:3239080-3239147:1:exon
so has part: feature:3239425-3239527:1:exon
so has part: feature:3239774-3239880:1:exon
so has part: feature:3240044-3240212:1:exon
so has part: feature:3240320-3241356:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3222410-3222512:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3223660-3223782:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3224100-3224180:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3227510-3227644:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3228244-3228287:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3228413-3228476:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3228935-3228994:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3229471-3229551:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3231270-3231308:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3231804-3231866:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3232091-3232184:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3232837-3232943:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3233475-3233533:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3233818-3233959:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3234955-3235044:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3235208-3235315:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3235412-3235499:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3235949-3236292:1:exon

position:3235949:1
position: 3235949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3237109-3237222:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3237500-3237724:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3237961-3238060:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3238140-3238219:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3238786-3238939:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3239080-3239147:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3239425-3239527:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3239774-3239880:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3240044-3240212:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3240320-3241356:1:exon

GOLGA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: GOLGA2
product: golgin A2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021551349.1
SIO_010081: GOLGA2
subclass of: SO_0000673
so part of: GOLGA2
location: join(3222410..3222512,3223660..3223782,3224100..3224180,3227510..3227644,3228244..3228287,3228413..3228476,3228935..3228994,3231270..3231308,3231804..3231866,3232091..3232184,3232837..3232943,3233475..3233533,3233818..3233959,3234955..3235044,3235208..3235315,3235412..3235499,3235946..3236292,3237109..3237222,3237500..3237724,3237961..3238060,3238140..3238219,3238786..3238939,3239080..3239147,3239425..3239527,3239774..3239880,3240044..3240212,3240320..3241356)
location: region:3222410-3241356:1
so has part: feature:3222410-3222512:1:exon
so has part: feature:3223660-3223782:1:exon
so has part: feature:3224100-3224180:1:exon
so has part: feature:3227510-3227644:1:exon
so has part: feature:3228244-3228287:1:exon
so has part: feature:3228413-3228476:1:exon
so has part: feature:3228935-3228994:1:exon
so has part: feature:3231270-3231308:1:exon
so has part: feature:3231804-3231866:1:exon
so has part: feature:3232091-3232184:1:exon
so has part: feature:3232837-3232943:1:exon
so has part: feature:3233475-3233533:1:exon
so has part: feature:3233818-3233959:1:exon
so has part: feature:3234955-3235044:1:exon
so has part: feature:3235208-3235315:1:exon
so has part: feature:3235412-3235499:1:exon
so has part: feature:3235946-3236292:1:exon
so has part: feature:3237109-3237222:1:exon
so has part: feature:3237500-3237724:1:exon
so has part: feature:3237961-3238060:1:exon
so has part: feature:3238140-3238219:1:exon
so has part: feature:3238786-3238939:1:exon
so has part: feature:3239080-3239147:1:exon
so has part: feature:3239425-3239527:1:exon
so has part: feature:3239774-3239880:1:exon
so has part: feature:3240044-3240212:1:exon
so has part: feature:3240320-3241356:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3222410-3222512:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3223660-3223782:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3224100-3224180:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3227510-3227644:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3228244-3228287:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3228413-3228476:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3228935-3228994:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3231270-3231308:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3231804-3231866:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3232091-3232184:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3232837-3232943:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3233475-3233533:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3233818-3233959:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3234955-3235044:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3235208-3235315:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3235412-3235499:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3235946-3236292:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3237109-3237222:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3237500-3237724:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3237961-3238060:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3238140-3238219:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3238786-3238939:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3239080-3239147:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3239425-3239527:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3239774-3239880:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3240044-3240212:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3240320-3241356:1:exon

GOLGA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: GOLGA2
product: golgin A2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_031506287.1
SIO_010081: GOLGA2
subclass of: SO_0000673
so part of: GOLGA2
location: join(3222410..3222512,3223660..3223782,3224100..3224180,3227510..3227644,3228244..3228287,3228413..3228476,3228935..3228994,3231270..3231308,3231804..3231866,3232091..3232184,3232837..3232943,3233475..3233533,3233818..3233959,3234955..3235044,3235208..3235315,3235412..3235499,3235949..3236292,3237109..3237222,3237500..3237724,3237961..3238060,3238140..3238219,3238786..3238939,3239080..3239147,3239425..3239527,3239774..3239880,3240044..3240212,3240320..3241356)
location: region:3222410-3241356:1
so has part: feature:3222410-3222512:1:exon
so has part: feature:3223660-3223782:1:exon
so has part: feature:3224100-3224180:1:exon
so has part: feature:3227510-3227644:1:exon
so has part: feature:3228244-3228287:1:exon
so has part: feature:3228413-3228476:1:exon
so has part: feature:3228935-3228994:1:exon
so has part: feature:3231270-3231308:1:exon
so has part: feature:3231804-3231866:1:exon
so has part: feature:3232091-3232184:1:exon
so has part: feature:3232837-3232943:1:exon
so has part: feature:3233475-3233533:1:exon
so has part: feature:3233818-3233959:1:exon
so has part: feature:3234955-3235044:1:exon
so has part: feature:3235208-3235315:1:exon
so has part: feature:3235412-3235499:1:exon
so has part: feature:3235949-3236292:1:exon
so has part: feature:3237109-3237222:1:exon
so has part: feature:3237500-3237724:1:exon
so has part: feature:3237961-3238060:1:exon
so has part: feature:3238140-3238219:1:exon
so has part: feature:3238786-3238939:1:exon
so has part: feature:3239080-3239147:1:exon
so has part: feature:3239425-3239527:1:exon
so has part: feature:3239774-3239880:1:exon
so has part: feature:3240044-3240212:1:exon
so has part: feature:3240320-3241356:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3222410-3222512:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3223660-3223782:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3224100-3224180:1:exon

urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
SIO_000628: feature:3228244-3228287:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3228413-3228476:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3228935-3228994:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3231270-3231308:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3231804-3231866:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3232091-3232184:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3232837-3232943:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3233475-3233533:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3233818-3233959:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3234955-3235044:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3235208-3235315:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3235412-3235499:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3235949-3236292:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3237109-3237222:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3237500-3237724:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3237961-3238060:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3238140-3238219:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3238786-3238939:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3239080-3239147:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3239425-3239527:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3239774-3239880:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3240044-3240212:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3240320-3241356:1:exon

GOLGA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: GOLGA2
product: golgin A2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021551350.1
SIO_010081: GOLGA2
subclass of: SO_0000673
so part of: GOLGA2
location: join(3222410..3222512,3223660..3223782,3224100..3224180,3228244..3228287,3228413..3228476,3228935..3228994,3229471..3229551,3231270..3231308,3231804..3231866,3232091..3232184,3232837..3232943,3233475..3233533,3233818..3233959,3234955..3235044,3235208..3235315,3235412..3235499,3235946..3236292,3237109..3237222,3237500..3237724,3237961..3238060,3238140..3238219,3238786..3238939,3239080..3239147,3239425..3239527,3239774..3239880,3240044..3240212,3240320..3241356)
location: region:3222410-3241356:1
so has part: feature:3222410-3222512:1:exon
so has part: feature:3223660-3223782:1:exon
so has part: feature:3224100-3224180:1:exon
so has part: feature:3228244-3228287:1:exon
so has part: feature:3228413-3228476:1:exon
so has part: feature:3228935-3228994:1:exon
so has part: feature:3229471-3229551:1:exon
so has part: feature:3231270-3231308:1:exon
so has part: feature:3231804-3231866:1:exon
so has part: feature:3232091-3232184:1:exon
so has part: feature:3232837-3232943:1:exon
so has part: feature:3233475-3233533:1:exon
so has part: feature:3233818-3233959:1:exon
so has part: feature:3234955-3235044:1:exon
so has part: feature:3235208-3235315:1:exon
so has part: feature:3235412-3235499:1:exon
so has part: feature:3235946-3236292:1:exon
so has part: feature:3237109-3237222:1:exon
so has part: feature:3237500-3237724:1:exon
so has part: feature:3237961-3238060:1:exon
so has part: feature:3238140-3238219:1:exon
so has part: feature:3238786-3238939:1:exon
so has part: feature:3239080-3239147:1:exon
so has part: feature:3239425-3239527:1:exon
so has part: feature:3239774-3239880:1:exon
so has part: feature:3240044-3240212:1:exon
so has part: feature:3240320-3241356:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3222410-3222512:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3223660-3223782:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3224100-3224180:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3228244-3228287:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3228413-3228476:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3228935-3228994:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3229471-3229551:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3231270-3231308:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3231804-3231866:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3232091-3232184:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3232837-3232943:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3233475-3233533:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3233818-3233959:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3234955-3235044:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3235208-3235315:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3235412-3235499:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3235946-3236292:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3237109-3237222:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3237500-3237724:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3237961-3238060:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3238140-3238219:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3238786-3238939:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3239080-3239147:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3239425-3239527:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3239774-3239880:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3240044-3240212:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3240320-3241356:1:exon

GOLGA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: GOLGA2
product: golgin A2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021551348.1
SIO_010081: GOLGA2
subclass of: SO_0000673
so part of: GOLGA2
location: join(3222410..3222512,3223660..3223782,3227510..3227644,3228244..3228287,3228413..3228476,3228935..3228994,3229471..3229551,3231270..3231308,3231804..3231866,3232091..3232184,3232837..3232943,3233475..3233533,3233818..3233959,3234955..3235044,3235208..3235315,3235412..3235499,3235946..3236292,3237109..3237222,3237500..3237724,3237961..3238060,3238140..3238219,3238786..3238939,3239080..3239147,3239425..3239527,3239774..3239880,3240044..3240212,3240320..3241356)
location: region:3222410-3241356:1
so has part: feature:3222410-3222512:1:exon
so has part: feature:3223660-3223782:1:exon
so has part: feature:3227510-3227644:1:exon
so has part: feature:3228244-3228287:1:exon
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so has part: feature:3228935-3228994:1:exon
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so has part: feature:3231270-3231308:1:exon
so has part: feature:3231804-3231866:1:exon
so has part: feature:3232091-3232184:1:exon
so has part: feature:3232837-3232943:1:exon
so has part: feature:3233475-3233533:1:exon
so has part: feature:3233818-3233959:1:exon
so has part: feature:3234955-3235044:1:exon
so has part: feature:3235208-3235315:1:exon
so has part: feature:3235412-3235499:1:exon
so has part: feature:3235946-3236292:1:exon
so has part: feature:3237109-3237222:1:exon
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so has part: feature:3237961-3238060:1:exon
so has part: feature:3238140-3238219:1:exon
so has part: feature:3238786-3238939:1:exon
so has part: feature:3239080-3239147:1:exon
so has part: feature:3239425-3239527:1:exon
so has part: feature:3239774-3239880:1:exon
so has part: feature:3240044-3240212:1:exon
so has part: feature:3240320-3241356:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3222410-3222512:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3223660-3223782:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3227510-3227644:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3228244-3228287:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3228413-3228476:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3228935-3228994:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3229471-3229551:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3231270-3231308:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3231804-3231866:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3232091-3232184:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3232837-3232943:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3233475-3233533:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3233818-3233959:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3234955-3235044:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3235208-3235315:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3235412-3235499:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3235946-3236292:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3237109-3237222:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3237500-3237724:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3237961-3238060:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3238140-3238219:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3238786-3238939:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3239080-3239147:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3239425-3239527:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3239774-3239880:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3240044-3240212:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3240320-3241356:1:exon

GOLGA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: GOLGA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 2 isoform X1
translation: MADGSRQSRLAAAKKKLKEYQQKNSPGATAGTKKKRKTKEGSRPATPTTDDQQPPENIQNILKVLVSDLNRSNGVAIPSLDKRKAYFDSDVATRSAEQLAPDVPVLSNSNSLPSCGSVLPAPESMQLTQMNEAADHKNALDENRSFSSTEGLRQLSEQLNGLVSQSASYVNGESAVSSTNIKEMETRYQELAVALDSSNLTNKQLVTKIEELKQQNQEAVNQLEKEKKEFEQKFSKEQAALREQLQVHIQTIGILVSEKSELQTALGHTQQAARQKSGEAESLAARLHSSRQRVSELERTLSSISTQQKQSEKHNKELVKERDNLKLELYKRSKSSEEIKQQNSELSEKVHSLVSQNSAMKLDVEDLQKKLEMAELMIQQFSSQGGSLDANQQLQMALEEKASLETQVAQLSESLHQLQAERDQYVEKLREEGNIWQQRVQQFSEQIHTMAEEKEKHMAKIQELEDSVAELLSTSAVKPMDTEPASPPGPTAAELSLQEEIQRLQQEKEELQGQYQAQVRDNEQLSHLNREQEEQLLELEKTVQRYSEEAVDRQQILEDMQSDKATISRALSQNRDLKEQLAELQNGFVKLTNENMEVTSALQSEQHVKKELAKRLGQLQENLAELKETLELKTQEARGLQEQRDQCYSHLQQYTLAFQQLTAEKDELHKQFLLQTQLMDRLQHEEVQGKVTVEMHLKELQQTKESLEAVAKENKELQAQISQLAAEMDGRILHQLEEGDEAMTEEIQKPSLVIPEKFESHDEMVTFVTSAMSQVEQEREDLRKQLAAQKQQCRTLLQQITALRQEQQHHVMLDGGSIMDTVPVEVHEALKTAMDKLQLRFTELMREKADLKERLEELEHRCIQLSGETDTIGEYIALYQSQRAILKQRHQEKEEYISRLAQDKEEMKMKLLELQDLVMRLVRERNEWYSKYVAAAQNPELLASQTEGVLPAERRIELNATDGAGLREVNLSDEAEREAAVHQSGFPPADSRAAQPNQEDPTAKQIMQLLREIQNPQERLGSLLENPCIPFFYRADENDEVKIMVV
SIO_010081: GOLGA2
subclass of: SO_0000673
so part of: GOLGA2
location: join(3222465..3222512,3223660..3223782,3224100..3224180,3227510..3227644,3228244..3228287,3228413..3228476,3228935..3228994,3229471..3229551,3231270..3231308,3231804..3231866,3232091..3232184,3232837..3232943,3233475..3233533,3233818..3233959,3234955..3235044,3235208..3235315,3235412..3235499,3235946..3236292,3237109..3237222,3237500..3237724,3237961..3238060,3238140..3238219,3238786..3238939,3239080..3239147,3239425..3239527,3239774..3239880,3240044..3240212,3240320..3240567)
location: region:3222465-3240567:1
so has part: feature:3222465-3222512:1:exon
so has part: feature:3223660-3223782:1:exon
so has part: feature:3224100-3224180:1:exon
so has part: feature:3227510-3227644:1:exon
so has part: feature:3228244-3228287:1:exon
so has part: feature:3228413-3228476:1:exon
so has part: feature:3228935-3228994:1:exon
so has part: feature:3229471-3229551:1:exon
so has part: feature:3231270-3231308:1:exon
so has part: feature:3231804-3231866:1:exon
so has part: feature:3232091-3232184:1:exon
so has part: feature:3232837-3232943:1:exon
so has part: feature:3233475-3233533:1:exon
so has part: feature:3233818-3233959:1:exon
so has part: feature:3234955-3235044:1:exon
so has part: feature:3235208-3235315:1:exon
so has part: feature:3235412-3235499:1:exon
so has part: feature:3235946-3236292:1:exon
so has part: feature:3237109-3237222:1:exon
so has part: feature:3237500-3237724:1:exon
so has part: feature:3237961-3238060:1:exon
so has part: feature:3238140-3238219:1:exon
so has part: feature:3238786-3238939:1:exon
so has part: feature:3239080-3239147:1:exon
so has part: feature:3239425-3239527:1:exon
so has part: feature:3239774-3239880:1:exon
so has part: feature:3240044-3240212:1:exon
so has part: feature:3240320-3240567:1:exon

XP_021407021.1
type: Protein
SIO_000068: ncbiprotein

position:3222465:1
position: 3222465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3240567:1
position: 3240567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3222465-3222512:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3223660-3223782:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3224100-3224180:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3227510-3227644:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3228244-3228287:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3228413-3228476:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3228935-3228994:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3229471-3229551:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3231270-3231308:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3231804-3231866:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3232091-3232184:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3232837-3232943:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3233475-3233533:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3233818-3233959:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3234955-3235044:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3235208-3235315:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3235412-3235499:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3235946-3236292:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3237109-3237222:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3237500-3237724:1:exon