Lonchura striata domestica isolate Mets1 chromosome 13, lonStrDom2, whole genome shotgun sequence.
type: Entry
definition: Lonchura striata domestica isolate Mets1 chromosome 13, lonStrDom2, whole genome shotgun sequence.
sequence version: NC_042579.1
sequence date: 2019-11-05
sequence: sequence
division: CON
label: NC_042579.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA391487
dblink: SAMN11521339
keyword: WGS
keyword: RefSeq
source: Lonchura striata domestica (Bengalese finch)
organism: Lonchura striata domestica
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM016775.1.\nAssembly name: lonStrDom2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the HHMI/UCSF on 2019/06/05. The\noriginal whole-genome shotgun project has the accession\nSWKX00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: HHMI/UCSF\nAssembly Date :: 30-NOV-2018\nAssembly Method :: AllPaths v. JAN-2015; HiRise v.\n NOV-2018\nAssembly Name :: lonStrDom2\nGenome Representation :: Full\nExpected Final Version :: Yes\nReference-guided Assembly :: GCA_002197715.1\nGenome Coverage :: 151.0x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Lonchura striata domestica\n Annotation Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 18629662
topology: linear
so has quality: SO_0000987
location: 1..18629662
location: region:1-18629662:1
RO_0002162: 299123

NC_042579
type: RefSeq
SIO_000068: refseq

PRJNA391487
type: BioProject
SIO_000068: bioproject

SAMN11521339
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18629662:1
position: 18629662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-18629662:1:source
so part of: sequence
organism: Lonchura striata domestica
mol type: genomic DNA
isolate: Mets1
sub species: domestica
chromosome: 13
sex: male
tissue type: blood
dev stage: adult

299123
type: Taxonomy
SIO_000068: taxonomy

LOC110475698
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110475698
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(64687..75198)
location: region:64687-75198:-1
so has part: feature:64687-75198:-1:exon
subclass of: SO_0000010

110475698
type: Gene
SIO_000068: ncbigene

position:64687:-1
position: 64687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75198:-1
position: 75198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64687-75198:-1:exon

LOC110475698
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110475698
product: putative calcium-activated potassium channel subunit beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021540032.2
SIO_010081: LOC110475698
subclass of: SO_0000673
so part of: LOC110475698
location: complement(join(64687..64994,66481..66676,68087..68252,75054..75198))
location: region:64687-75198:-1
so has part: feature:75054-75198:-1:exon
so has part: feature:68087-68252:-1:exon
so has part: feature:66481-66676:-1:exon
so has part: feature:64687-64994:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:75054-75198:-1:exon

position:75054:-1
position: 75054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:68087-68252:-1:exon

position:68087:-1
position: 68087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68252:-1
position: 68252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:66481-66676:-1:exon

position:66481:-1
position: 66481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66676:-1
position: 66676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:64687-64994:-1:exon

position:64994:-1
position: 64994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110475698
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110475698
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative calcium-activated potassium channel subunit beta
translation: MLGKKLVTAQKRGETRALCLGLGMVACSMMMYFFIGITIVPFYTKSVWTTETVCKVLKANIKEKVFCPNSKGPEDEEIFPYPCLQVWVNLTASGQEVMLYQTEDTLERNPKCSYVPDKLENSKEVKAQIEIIASNFKKYQTFPCYYDPRGTQTNVILSRLYPTKGLLFAFLWPTLMFTGGCLIIVLVKISQYVSVLSAWQ
SIO_010081: LOC110475698
subclass of: SO_0000673
so part of: LOC110475698
location: complement(join(64725..64994,66481..66676,68087..68223))
location: region:64725-68223:-1
so has part: feature:68087-68223:-1:exon
so has part: feature:66481-66676:-1:exon
so has part: feature:64725-64994:-1:exon

XP_021395707.1
type: Protein
SIO_000068: ncbiprotein

position:64725:-1
position: 64725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68223:-1
position: 68223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68087-68223:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66481-66676:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:64725-64994:-1:exon

LOC110475701
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110475701
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 218274..454299
location: region:218274-454299:1
so has part: feature:218274-454299:1:exon
subclass of: SO_0000010

110475701
type: Gene
SIO_000068: ncbigene

position:218274:1
position: 218274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454299:1
position: 454299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218274-454299:1:exon

LOC110475701
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110475701
product: Kv channel-interacting protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021540037.2
SIO_010081: LOC110475701
subclass of: SO_0000673
so part of: LOC110475701
location: join(218274..218858,437090..437214,443278..443347,444789..444859,446487..446594,447548..447652,448223..448285,450492..454299)
location: region:218274-454299:1
so has part: feature:218274-218858:1:exon
so has part: feature:437090-437214:1:exon
so has part: feature:443278-443347:1:exon
so has part: feature:444789-444859:1:exon
so has part: feature:446487-446594:1:exon
so has part: feature:447548-447652:1:exon
so has part: feature:448223-448285:1:exon
so has part: feature:450492-454299:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:218274-218858:1:exon

position:218858:1
position: 218858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:437090-437214:1:exon

position:437090:1
position: 437090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437214:1
position: 437214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:443278-443347:1:exon

position:443278:1
position: 443278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443347:1
position: 443347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:444789-444859:1:exon

position:444789:1
position: 444789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444859:1
position: 444859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:446487-446594:1:exon

position:446487:1
position: 446487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446594:1
position: 446594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:447548-447652:1:exon

position:447548:1
position: 447548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447652:1
position: 447652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:448223-448285:1:exon

position:448223:1
position: 448223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448285:1
position: 448285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:450492-454299:1:exon

position:450492:1
position: 450492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110475701
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110475701
product: Kv channel-interacting protein 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021540043.1
SIO_010081: LOC110475701
subclass of: SO_0000673
so part of: LOC110475701
location: join(218747..218858,235377..235444,437090..437214,443278..443347,444789..444859,446487..446594,447548..447652,448223..448285,450492..454299)
location: region:218747-454299:1
so has part: feature:218747-218858:1:exon
so has part: feature:235377-235444:1:exon
so has part: feature:437090-437214:1:exon
so has part: feature:443278-443347:1:exon
so has part: feature:444789-444859:1:exon
so has part: feature:446487-446594:1:exon
so has part: feature:447548-447652:1:exon
so has part: feature:448223-448285:1:exon
so has part: feature:450492-454299:1:exon

position:218747:1
position: 218747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218747-218858:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:235377-235444:1:exon

position:235377:1
position: 235377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235444:1
position: 235444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:437090-437214:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:443278-443347:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:444789-444859:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:446487-446594:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:447548-447652:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448223-448285:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:450492-454299:1:exon

LOC110475701
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110475701
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Kv channel-interacting protein 1 isoform X2
translation: MGAVMGTFSSLQTKQRRPSKDKIEDELEMTTVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASMYAHYLFNAFDTAQNGSVKFEDFVMALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDAPRQHVEVFFQKMDKNKDGVVTLDEFIESCQEDDNIMRSLQLFENVM
SIO_010081: LOC110475701
subclass of: SO_0000673
so part of: LOC110475701
location: join(218798..218858,437090..437214,443278..443347,444789..444859,446487..446594,447548..447652,448223..448285,450492..450539)
location: region:218798-450539:1
so has part: feature:218798-218858:1:exon
so has part: feature:437090-437214:1:exon
so has part: feature:443278-443347:1:exon
so has part: feature:444789-444859:1:exon
so has part: feature:446487-446594:1:exon
so has part: feature:447548-447652:1:exon
so has part: feature:448223-448285:1:exon
so has part: feature:450492-450539:1:exon

XP_021395712.1
type: Protein
SIO_000068: ncbiprotein

position:218798:1
position: 218798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450539:1
position: 450539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218798-218858:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:437090-437214:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:443278-443347:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:444789-444859:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:446487-446594:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:447548-447652:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448223-448285:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:450492-450539:1:exon

LOC110475701
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110475701
product: Kv channel-interacting protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021540039.1
SIO_010081: LOC110475701
subclass of: SO_0000673
so part of: LOC110475701
location: join(218800..218858,291304..291448,437090..437214,443278..443347,444789..444859,446487..446594,447548..447652,448223..448285,450492..454299)
location: region:218800-454299:1
so has part: feature:218800-218858:1:exon
so has part: feature:291304-291448:1:exon
so has part: feature:437090-437214:1:exon
so has part: feature:443278-443347:1:exon
so has part: feature:444789-444859:1:exon
so has part: feature:446487-446594:1:exon
so has part: feature:447548-447652:1:exon
so has part: feature:448223-448285:1:exon
so has part: feature:450492-454299:1:exon

position:218800:1
position: 218800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218800-218858:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:291304-291448:1:exon

position:291304:1
position: 291304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291448:1
position: 291448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:437090-437214:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:443278-443347:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:444789-444859:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:446487-446594:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:447548-447652:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448223-448285:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:450492-454299:1:exon

LOC110475701
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110475701
product: Kv channel-interacting protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021540040.2
SIO_010081: LOC110475701
subclass of: SO_0000673
so part of: LOC110475701
location: join(400661..400751,437090..437214,443278..443347,444789..444859,446487..446594,447548..447652,448223..448285,450492..454299)
location: region:400661-454299:1
so has part: feature:400661-400751:1:exon
so has part: feature:437090-437214:1:exon
so has part: feature:443278-443347:1:exon
so has part: feature:444789-444859:1:exon
so has part: feature:446487-446594:1:exon
so has part: feature:447548-447652:1:exon
so has part: feature:448223-448285:1:exon
so has part: feature:450492-454299:1:exon

position:400661:1
position: 400661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400661-400751:1:exon

position:400751:1
position: 400751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:437090-437214:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:443278-443347:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:444789-444859:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:446487-446594:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:447548-447652:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448223-448285:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:450492-454299:1:exon

LOC110475701
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110475701
product: Kv channel-interacting protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021540036.2
SIO_010081: LOC110475701
subclass of: SO_0000673
so part of: LOC110475701
location: join(436700..436796,437090..437214,443278..443347,444789..444859,446487..446594,447548..447652,448223..448285,450492..454299)
location: region:436700-454299:1
so has part: feature:436700-436796:1:exon
so has part: feature:437090-437214:1:exon
so has part: feature:443278-443347:1:exon
so has part: feature:444789-444859:1:exon
so has part: feature:446487-446594:1:exon
so has part: feature:447548-447652:1:exon
so has part: feature:448223-448285:1:exon
so has part: feature:450492-454299:1:exon

position:436700:1
position: 436700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436700-436796:1:exon

position:436796:1
position: 436796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:437090-437214:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:443278-443347:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:444789-444859:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:446487-446594:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:447548-447652:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448223-448285:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:450492-454299:1:exon

LOC110475701
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110475701
product: Kv channel-interacting protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021540041.2
SIO_010081: LOC110475701
subclass of: SO_0000673
so part of: LOC110475701
location: join(436887..436909,437090..437214,443278..443347,444789..444859,446487..446594,447548..447652,448223..448285,450492..454299)
location: region:436887-454299:1
so has part: feature:436887-436909:1:exon
so has part: feature:437090-437214:1:exon
so has part: feature:443278-443347:1:exon
so has part: feature:444789-444859:1:exon
so has part: feature:446487-446594:1:exon
so has part: feature:447548-447652:1:exon
so has part: feature:448223-448285:1:exon
so has part: feature:450492-454299:1:exon

position:436887:1
position: 436887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436887-436909:1:exon

position:436909:1
position: 436909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:437090-437214:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:443278-443347:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:444789-444859:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:446487-446594:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:447548-447652:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448223-448285:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:450492-454299:1:exon

LOC110475701
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110475701
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Kv channel-interacting protein 1 isoform X1
translation: MTTVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASMYAHYLFNAFDTAQNGSVKFEDFVMALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDAPRQHVEVFFQKMDKNKDGVVTLDEFIESCQEDDNIMRSLQLFENVM
SIO_010081: LOC110475701
subclass of: SO_0000673
so part of: LOC110475701
location: join(437113..437214,443278..443347,444789..444859,446487..446594,447548..447652,448223..448285,450492..450539)
location: region:437113-450539:1
so has part: feature:437113-437214:1:exon
so has part: feature:443278-443347:1:exon
so has part: feature:444789-444859:1:exon
so has part: feature:446487-446594:1:exon
so has part: feature:447548-447652:1:exon
so has part: feature:448223-448285:1:exon
so has part: feature:450492-450539:1:exon

XP_021395714.1
type: Protein
SIO_000068: ncbiprotein

position:437113:1
position: 437113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437113-437214:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443278-443347:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:444789-444859:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:446487-446594:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:447548-447652:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:448223-448285:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:450492-450539:1:exon

LOC110475701
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110475701
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Kv channel-interacting protein 1 isoform X1
translation: MTTVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASMYAHYLFNAFDTAQNGSVKFEDFVMALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDAPRQHVEVFFQKMDKNKDGVVTLDEFIESCQEDDNIMRSLQLFENVM
SIO_010081: LOC110475701
subclass of: SO_0000673
so part of: LOC110475701
location: join(437113..437214,443278..443347,444789..444859,446487..446594,447548..447652,448223..448285,450492..450539)
location: region:437113-450539:1
so has part: feature:437113-437214:1:exon
so has part: feature:443278-443347:1:exon
so has part: feature:444789-444859:1:exon
so has part: feature:446487-446594:1:exon
so has part: feature:447548-447652:1:exon
so has part: feature:448223-448285:1:exon
so has part: feature:450492-450539:1:exon

XP_021395715.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:437113-437214:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443278-443347:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:444789-444859:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:446487-446594:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:447548-447652:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:448223-448285:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:450492-450539:1:exon

LOC110475701
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110475701
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Kv channel-interacting protein 1 isoform X1
translation: MTTVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASMYAHYLFNAFDTAQNGSVKFEDFVMALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDAPRQHVEVFFQKMDKNKDGVVTLDEFIESCQEDDNIMRSLQLFENVM
SIO_010081: LOC110475701
subclass of: SO_0000673
so part of: LOC110475701
location: join(437113..437214,443278..443347,444789..444859,446487..446594,447548..447652,448223..448285,450492..450539)
location: region:437113-450539:1
so has part: feature:437113-437214:1:exon
so has part: feature:443278-443347:1:exon
so has part: feature:444789-444859:1:exon
so has part: feature:446487-446594:1:exon
so has part: feature:447548-447652:1:exon
so has part: feature:448223-448285:1:exon
so has part: feature:450492-450539:1:exon

XP_021395716.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:437113-437214:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443278-443347:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:444789-444859:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:446487-446594:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:447548-447652:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:448223-448285:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:450492-450539:1:exon

LOC110475701
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110475701
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Kv channel-interacting protein 1 isoform X1
translation: MTTVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASMYAHYLFNAFDTAQNGSVKFEDFVMALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDAPRQHVEVFFQKMDKNKDGVVTLDEFIESCQEDDNIMRSLQLFENVM
SIO_010081: LOC110475701
subclass of: SO_0000673
so part of: LOC110475701
location: join(437113..437214,443278..443347,444789..444859,446487..446594,447548..447652,448223..448285,450492..450539)
location: region:437113-450539:1
so has part: feature:437113-437214:1:exon
so has part: feature:443278-443347:1:exon
so has part: feature:444789-444859:1:exon
so has part: feature:446487-446594:1:exon
so has part: feature:447548-447652:1:exon
so has part: feature:448223-448285:1:exon
so has part: feature:450492-450539:1:exon

XP_021395718.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:437113-437214:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443278-443347:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:444789-444859:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:446487-446594:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:447548-447652:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:448223-448285:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:450492-450539:1:exon

LOC110475701
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110475701
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Kv channel-interacting protein 1 isoform X1
translation: MTTVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASMYAHYLFNAFDTAQNGSVKFEDFVMALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDAPRQHVEVFFQKMDKNKDGVVTLDEFIESCQEDDNIMRSLQLFENVM
SIO_010081: LOC110475701
subclass of: SO_0000673
so part of: LOC110475701
location: join(437113..437214,443278..443347,444789..444859,446487..446594,447548..447652,448223..448285,450492..450539)
location: region:437113-450539:1
so has part: feature:437113-437214:1:exon
so has part: feature:443278-443347:1:exon
so has part: feature:444789-444859:1:exon
so has part: feature:446487-446594:1:exon
so has part: feature:447548-447652:1:exon
so has part: feature:448223-448285:1:exon
so has part: feature:450492-450539:1:exon

XP_021395711.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:437113-437214:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443278-443347:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:444789-444859:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:446487-446594:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:447548-447652:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:448223-448285:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:450492-450539:1:exon

GABRP
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: GABRP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 474658..488176
location: region:474658-488176:1
so has part: feature:474658-488176:1:exon
subclass of: SO_0000010

110475697
type: Gene
SIO_000068: ncbigene

position:474658:1
position: 474658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488176:1
position: 488176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474658-488176:1:exon

GABRP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: GABRP
product: gamma-aminobutyric acid type A receptor pi subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021540031.2
SIO_010081: GABRP
subclass of: SO_0000673
so part of: GABRP
location: join(474658..474662,475849..475958,479219..479286,481029..481246,482076..482158,484550..484687,485900..486052,486599..486792,487699..488176)
location: region:474658-488176:1
so has part: feature:474658-474662:1:exon
so has part: feature:475849-475958:1:exon
so has part: feature:479219-479286:1:exon
so has part: feature:481029-481246:1:exon
so has part: feature:482076-482158:1:exon
so has part: feature:484550-484687:1:exon
so has part: feature:485900-486052:1:exon
so has part: feature:486599-486792:1:exon
so has part: feature:487699-488176:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:474658-474662:1:exon

position:474662:1
position: 474662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:475849-475958:1:exon

position:475849:1
position: 475849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475958:1
position: 475958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:479219-479286:1:exon

position:479219:1
position: 479219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479286:1
position: 479286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:481029-481246:1:exon

position:481029:1
position: 481029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481246:1
position: 481246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:482076-482158:1:exon

position:482076:1
position: 482076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:482158:1
position: 482158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:484550-484687:1:exon

position:484550:1
position: 484550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484687:1
position: 484687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:485900-486052:1:exon

position:485900:1
position: 485900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486052:1
position: 486052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:486599-486792:1:exon

position:486599:1
position: 486599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486792:1
position: 486792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:487699-488176:1:exon

position:487699:1
position: 487699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GABRP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: GABRP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-aminobutyric acid receptor subunit pi
translation: MWRSLGHGSSLHDKGTTSLPGFENLTMGYNKYLRPYFGGEPVQIAMSLDIASISSISESDMDYTATIALRQRWTDPRLVFHGNKSFTLDARLVELLWVPDTYIVESKRSFLHDVTVGNRLVRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCQLQLESWGYDENDVTFTWLRGNNSVHGIEKLRLSQYTVEHYHTLVSKSQQETGSYPRLILQFELRRNVLYFILETYVPSTLLVMLSWVSFWITLDSVPARTCIGVTTVLSMTTLMIGSRSSLSKTNCFIKAIDVYLGICFSFIFGALVEYAVAHYSSSQKCAAKVPEEGPANELTEEMEEVNITNIVKNSMTSYKQKISFTSIEISSNNVNCSDLTMKSHEKIKCVLRNKMHRIIGYFTIQNPGNVDHYSKLLFPLFFMVVNVFYWAYYLYF
SIO_010081: GABRP
subclass of: SO_0000673
so part of: GABRP
location: join(474658..474662,475849..475958,479219..479286,481029..481246,482076..482158,484550..484687,485900..486052,486599..486792,487699..488013)
location: region:474658-488013:1
so has part: feature:474658-474662:1:exon
so has part: feature:475849-475958:1:exon
so has part: feature:479219-479286:1:exon
so has part: feature:481029-481246:1:exon
so has part: feature:482076-482158:1:exon
so has part: feature:484550-484687:1:exon
so has part: feature:485900-486052:1:exon
so has part: feature:486599-486792:1:exon
so has part: feature:487699-488013:1:exon

XP_021395706.2
type: Protein
SIO_000068: ncbiprotein

position:488013:1
position: 488013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474658-474662:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:475849-475958:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479219-479286:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:481029-481246:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:482076-482158:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:484550-484687:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:485900-486052:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:486599-486792:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:487699-488013:1:exon

LOC110475699
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110475699
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 497699..508021
location: region:497699-508021:1
so has part: feature:497699-508021:1:exon
subclass of: SO_0000010

110475699
type: Gene
SIO_000068: ncbigene

position:497699:1
position: 497699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508021:1
position: 508021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497699-508021:1:exon

LOC110475699
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110475699
product: kazal-type serine protease inhibitor domain-containing protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 10 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_021540034.2
SIO_010081: LOC110475699
subclass of: SO_0000673
so part of: LOC110475699
location: join(497699..498696,503988..504148,505260..505404,506785..508021)
location: region:497699-508021:1
so has part: feature:497699-498696:1:exon
so has part: feature:503988-504148:1:exon
so has part: feature:505260-505404:1:exon
so has part: feature:506785-508021:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:497699-498696:1:exon

position:498696:1
position: 498696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:503988-504148:1:exon

position:503988:1
position: 503988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504148:1
position: 504148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:505260-505404:1:exon

position:505260:1
position: 505260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505404:1
position: 505404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:506785-508021:1:exon

position:506785:1
position: 506785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110475699
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110475699
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kazal-type serine protease inhibitor domain-containing protein 1
translation: MKYRMVTALLVALVQVSENFPALYHQGWWRLLRERDSCGKCDLELCSEPKDCPAGAVLDRCGCCLECGNVEGQICDLDQGNHFYGQCGDHLECRLDVDEARFGEVPEPQCVCKSQESICGPNGKTYENICQFNKDYAAKRNISMKHKGPCESAPVISMPPQDAQNYTGNDVIFGCEVSAYPMPQLEWKKKGNKMFLPGDDTHVSVQARGGPQKYGVTGWLQIQGLKKSDEGIYICHTKNKHGATYASARLKVIDVPSPAFAFTAGSKSASYSIEYEEYYDNSDEEDDEEYESGNYDNENNSE
SIO_010081: LOC110475699
subclass of: SO_0000673
so part of: LOC110475699
location: join(498240..498696,503988..504148,505260..505404,506785..506930)
location: region:498240-506930:1
so has part: feature:498240-498696:1:exon
so has part: feature:503988-504148:1:exon
so has part: feature:505260-505404:1:exon
so has part: feature:506785-506930:1:exon

XP_021395709.1
type: Protein
SIO_000068: ncbiprotein

position:498240:1
position: 498240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506930:1
position: 506930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498240-498696:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:503988-504148:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:505260-505404:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:506785-506930:1:exon

TLX3
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TLX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 630620..632465
location: region:630620-632465:1
so has part: feature:630620-632465:1:exon
subclass of: SO_0000010

110475700
type: Gene
SIO_000068: ncbigene

position:630620:1
position: 630620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632465:1
position: 632465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:630620-632465:1:exon

TLX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TLX3
product: T cell leukemia homeobox 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 26% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021540035.2
SIO_010081: TLX3
subclass of: SO_0000673
so part of: TLX3
location: join(630620..631049,631434..631677,632255..632465)
location: region:630620-632465:1
so has part: feature:630620-631049:1:exon
so has part: feature:631434-631677:1:exon
so has part: feature:632255-632465:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:630620-631049:1:exon

position:631049:1
position: 631049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:631434-631677:1:exon

position:631434:1
position: 631434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631677:1
position: 631677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:632255-632465:1:exon

position:632255:1
position: 632255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TLX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TLX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-cell leukemia homeobox protein 3
translation: MDPPRMDPPGPAQGQHQHEPISFGIDQILNSPEQESAPPPPPRGPDDATFLGGPGGRGGAPYPALPAPFPAIAAPFEDSGSYSVNLSLAPAGVIRVPAHRPIPGAVPPPISSAIPAMPAVPSLGSLNFPWMESSRRFVKDRFTAAAALTPFTVTRRIGHPYQNRTPPKRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKTLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQASRLMLQLQHDAFQKSLNESIQPDPLCLHNSSLFALQNLQPWEEESAKIPPVTSLV
SIO_010081: TLX3
subclass of: SO_0000673
so part of: TLX3
location: join(630620..631049,631434..631677,632255..632465)
location: region:630620-632465:1
so has part: feature:630620-631049:1:exon
so has part: feature:631434-631677:1:exon
so has part: feature:632255-632465:1:exon

XP_021395710.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:630620-631049:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:631434-631677:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:632255-632465:1:exon

NPM1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: NPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 667833..679812
location: region:667833-679812:1
so has part: feature:667833-679812:1:exon
subclass of: SO_0000010

110475703
type: Gene
SIO_000068: ncbigene

position:667833:1
position: 667833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:679812:1
position: 679812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:667833-679812:1:exon

NPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: NPM1
product: nucleophosmin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 ESTs, 10 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021540044.2
SIO_010081: NPM1
subclass of: SO_0000673
so part of: NPM1
location: join(667833..668001,668745..668824,671646..671765,672496..672589,673320..673423,673843..673904,674350..674404,675357..675446,676292..676393,678406..678480,679465..679812)
location: region:667833-679812:1
so has part: feature:667833-668001:1:exon
so has part: feature:668745-668824:1:exon
so has part: feature:671646-671765:1:exon
so has part: feature:672496-672589:1:exon
so has part: feature:673320-673423:1:exon
so has part: feature:673843-673904:1:exon
so has part: feature:674350-674404:1:exon
so has part: feature:675357-675446:1:exon
so has part: feature:676292-676393:1:exon
so has part: feature:678406-678480:1:exon
so has part: feature:679465-679812:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:667833-668001:1:exon

position:668001:1
position: 668001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:668745-668824:1:exon

position:668745:1
position: 668745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:668824:1
position: 668824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:671646-671765:1:exon

position:671646:1
position: 671646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671765:1
position: 671765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:672496-672589:1:exon

position:672496:1
position: 672496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672589:1
position: 672589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:673320-673423:1:exon

position:673320:1
position: 673320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:673423:1
position: 673423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:673843-673904:1:exon

position:673843:1
position: 673843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:673904:1
position: 673904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:674350-674404:1:exon

position:674350:1
position: 674350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:674404:1
position: 674404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:675357-675446:1:exon

position:675357:1
position: 675357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:675446:1
position: 675446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:676292-676393:1:exon

position:676292:1
position: 676292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:676393:1
position: 676393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:678406-678480:1:exon

position:678406:1
position: 678406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678480:1
position: 678480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:679465-679812:1:exon

position:679465:1
position: 679465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: NPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleophosmin
translation: MEDSAMDMESMGPLRPQTFLFGCELKADKEFQFKVDDEENEHQLSLRTVTLGAGAKDELHIVEAEALDYEGNPTKVVLASLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVYVSGQHLVALEEEPESDEEEDDSKIVNASAKRPASGGGPKTPQKKPKLAEDDEDDDEDEDDDDDDEDDLEDDEEEIKAPIKKPVREVAGKNMQKAKQNGKDSKPSTPASKSKTPDSKKDKTLTPKTPKVPLSLEEIKAKMQASVDKGTTLPKLEPKFANYVKNCFRTEDQKVIQALWQWRQTL
SIO_010081: NPM1
subclass of: SO_0000673
so part of: NPM1
location: join(667938..668001,668745..668824,671646..671765,672496..672589,673320..673423,673843..673904,674350..674404,675357..675446,676292..676393,678406..678480,679465..679503)
location: region:667938-679503:1
so has part: feature:667938-668001:1:exon
so has part: feature:668745-668824:1:exon
so has part: feature:671646-671765:1:exon
so has part: feature:672496-672589:1:exon
so has part: feature:673320-673423:1:exon
so has part: feature:673843-673904:1:exon
so has part: feature:674350-674404:1:exon
so has part: feature:675357-675446:1:exon
so has part: feature:676292-676393:1:exon
so has part: feature:678406-678480:1:exon
so has part: feature:679465-679503:1:exon

XP_021395719.1
type: Protein
SIO_000068: ncbiprotein

position:667938:1
position: 667938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:679503:1
position: 679503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:667938-668001:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:668745-668824:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671646-671765:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:672496-672589:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:673320-673423:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:673843-673904:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:674350-674404:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:675357-675446:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:676292-676393:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:678406-678480:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:679465-679503:1:exon

FGF18
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: FGF18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 689525..753954
location: region:689525-753954:1
so has part: feature:689525-753954:1:exon
subclass of: SO_0000010

110475704
type: Gene
SIO_000068: ncbigene

position:689525:1
position: 689525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753954:1
position: 753954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:689525-753954:1:exon

FGF18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: FGF18
product: fibroblast growth factor 18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021540045.2
SIO_010081: FGF18
subclass of: SO_0000673
so part of: FGF18
location: join(689525..689582,690010..690281,690554..690590,712088..712268,738219..738325,752913..753954)
location: region:689525-753954:1
so has part: feature:689525-689582:1:exon
so has part: feature:690010-690281:1:exon
so has part: feature:690554-690590:1:exon
so has part: feature:712088-712268:1:exon
so has part: feature:738219-738325:1:exon
so has part: feature:752913-753954:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:689525-689582:1:exon

position:689582:1
position: 689582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:690010-690281:1:exon

position:690010:1
position: 690010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:690281:1
position: 690281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:690554-690590:1:exon

position:690554:1
position: 690554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:690590:1
position: 690590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:712088-712268:1:exon

position:712088:1
position: 712088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:712268:1
position: 712268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:738219-738325:1:exon

position:738219:1
position: 738219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:738325:1
position: 738325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:752913-753954:1:exon

position:752913:1
position: 752913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGF18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: FGF18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 18
translation: MYSLLSACTCLCLHFLLLCFQVQMFAAEENVDFRIHVENQTRARDDVSRKQLRLYQLYSRTSGKHIQVLGRRISAKGEDGDKYAQLLVETDTFGSQVRIKGKETDFYLCMNRKGKLVGKPDGTSKECVFIEKVLENNYTALMSAKYSGWYVGFTKKGRPRKGPKTRENQQDVHFMKRYPKGQMEIQKPFKYTTVTKRTKRIRPTNPS
SIO_010081: FGF18
subclass of: SO_0000673
so part of: FGF18
location: join(690250..690281,690554..690590,712088..712268,738219..738325,752913..753179)
location: region:690250-753179:1
so has part: feature:690250-690281:1:exon
so has part: feature:690554-690590:1:exon
so has part: feature:712088-712268:1:exon
so has part: feature:738219-738325:1:exon
so has part: feature:752913-753179:1:exon

XP_021395720.1
type: Protein
SIO_000068: ncbiprotein

position:690250:1
position: 690250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753179:1
position: 753179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:690250-690281:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:690554-690590:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:712088-712268:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:738219-738325:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:752913-753179:1:exon

FBXW11
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: FBXW11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(893959..962433)
location: region:893959-962433:-1
so has part: feature:893959-962433:-1:exon
subclass of: SO_0000010

110478308
type: Gene
SIO_000068: ncbigene

position:893959:-1
position: 893959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:962433:-1
position: 962433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:893959-962433:-1:exon

FBXW11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: FBXW11
product: F-box and WD repeat domain containing 11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021544864.1
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(893959..896287,899256..899444,900863..900941,901467..901577,902077..902195,903167..903416,903948..904066,904587..904724,911892..911982,912822..913008,916177..916402,928311..928373,946487..946588,962343..962433))
location: region:893959-962433:-1
so has part: feature:962343-962433:-1:exon
so has part: feature:946487-946588:-1:exon
so has part: feature:928311-928373:-1:exon
so has part: feature:916177-916402:-1:exon
so has part: feature:912822-913008:-1:exon
so has part: feature:911892-911982:-1:exon
so has part: feature:904587-904724:-1:exon
so has part: feature:903948-904066:-1:exon
so has part: feature:903167-903416:-1:exon
so has part: feature:902077-902195:-1:exon
so has part: feature:901467-901577:-1:exon
so has part: feature:900863-900941:-1:exon
so has part: feature:899256-899444:-1:exon
so has part: feature:893959-896287:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:962343-962433:-1:exon

position:962343:-1
position: 962343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:946487-946588:-1:exon

position:946487:-1
position: 946487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:946588:-1
position: 946588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:928311-928373:-1:exon

position:928311:-1
position: 928311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:928373:-1
position: 928373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:916177-916402:-1:exon

position:916177:-1
position: 916177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:916402:-1
position: 916402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:912822-913008:-1:exon

position:912822:-1
position: 912822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:913008:-1
position: 913008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:911892-911982:-1:exon

position:911892:-1
position: 911892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:911982:-1
position: 911982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:904587-904724:-1:exon

position:904587:-1
position: 904587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:904724:-1
position: 904724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:903948-904066:-1:exon

position:903948:-1
position: 903948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:904066:-1
position: 904066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:903167-903416:-1:exon

position:903167:-1
position: 903167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:903416:-1
position: 903416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:902077-902195:-1:exon

position:902077:-1
position: 902077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:902195:-1
position: 902195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:901467-901577:-1:exon

position:901467:-1
position: 901467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901577:-1
position: 901577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:900863-900941:-1:exon

position:900863:-1
position: 900863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900941:-1
position: 900941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:899256-899444:-1:exon

position:899256:-1
position: 899256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899444:-1
position: 899444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:893959-896287:-1:exon

position:896287:-1
position: 896287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FBXW11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: FBXW11
product: F-box and WD repeat domain containing 11, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021544865.1
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(893959..896287,899256..899444,900863..900941,901467..901577,902077..902195,903167..903416,903948..904066,904587..904724,911892..911982,912822..913008,916177..916402,928311..928373,962343..962428))
location: region:893959-962428:-1
so has part: feature:962343-962428:-1:exon
so has part: feature:928311-928373:-1:exon
so has part: feature:916177-916402:-1:exon
so has part: feature:912822-913008:-1:exon
so has part: feature:911892-911982:-1:exon
so has part: feature:904587-904724:-1:exon
so has part: feature:903948-904066:-1:exon
so has part: feature:903167-903416:-1:exon
so has part: feature:902077-902195:-1:exon
so has part: feature:901467-901577:-1:exon
so has part: feature:900863-900941:-1:exon
so has part: feature:899256-899444:-1:exon
so has part: feature:893959-896287:-1:exon

position:962428:-1
position: 962428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:962343-962428:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:928311-928373:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:916177-916402:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:912822-913008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:911892-911982:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:904587-904724:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:903948-904066:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:903167-903416:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:902077-902195:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:901467-901577:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:900863-900941:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:899256-899444:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:893959-896287:-1:exon

FBXW11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: FBXW11
product: F-box and WD repeat domain containing 11, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021544866.1
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(893959..896287,899256..899444,900863..900941,901467..901577,902077..902195,903167..903416,903948..904066,904587..904724,911892..911982,912822..913008,916177..916402,928311..928373,954212..954291,962343..962428))
location: region:893959-962428:-1
so has part: feature:962343-962428:-1:exon
so has part: feature:954212-954291:-1:exon
so has part: feature:928311-928373:-1:exon
so has part: feature:916177-916402:-1:exon
so has part: feature:912822-913008:-1:exon
so has part: feature:911892-911982:-1:exon
so has part: feature:904587-904724:-1:exon
so has part: feature:903948-904066:-1:exon
so has part: feature:903167-903416:-1:exon
so has part: feature:902077-902195:-1:exon
so has part: feature:901467-901577:-1:exon
so has part: feature:900863-900941:-1:exon
so has part: feature:899256-899444:-1:exon
so has part: feature:893959-896287:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:962343-962428:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:954212-954291:-1:exon

position:954212:-1
position: 954212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:954291:-1
position: 954291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:928311-928373:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:916177-916402:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:912822-913008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:911892-911982:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:904587-904724:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:903948-904066:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:903167-903416:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:902077-902195:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:901467-901577:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:900863-900941:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:899256-899444:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:893959-896287:-1:exon

FBXW11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: FBXW11
product: F-box and WD repeat domain containing 11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031506040.1
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(893959..896287,899256..899444,900863..900941,901467..901577,902077..902195,903167..903416,903948..904066,904587..904724,911892..911982,912822..913008,916177..916402,928311..928373,946487..946588,951787..953579))
location: region:893959-953579:-1
so has part: feature:951787-953579:-1:exon
so has part: feature:946487-946588:-1:exon
so has part: feature:928311-928373:-1:exon
so has part: feature:916177-916402:-1:exon
so has part: feature:912822-913008:-1:exon
so has part: feature:911892-911982:-1:exon
so has part: feature:904587-904724:-1:exon
so has part: feature:903948-904066:-1:exon
so has part: feature:903167-903416:-1:exon
so has part: feature:902077-902195:-1:exon
so has part: feature:901467-901577:-1:exon
so has part: feature:900863-900941:-1:exon
so has part: feature:899256-899444:-1:exon
so has part: feature:893959-896287:-1:exon

position:953579:-1
position: 953579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:951787-953579:-1:exon

position:951787:-1
position: 951787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:946487-946588:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:928311-928373:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:916177-916402:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:912822-913008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:911892-911982:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:904587-904724:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:903948-904066:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:903167-903416:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:902077-902195:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:901467-901577:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:900863-900941:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:899256-899444:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:893959-896287:-1:exon

FBXW11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: FBXW11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 11 isoform X3
translation: MEPDSVIEDKTIELMNTSVMEDQNEDESPKKNTLWQISNGTSSVIVSRKRPSEGNYEKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPLSAQNETRSPSRTYTYISR
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(899283..899444,900863..900941,901467..901577,902077..902195,903167..903416,903948..904066,904587..904724,911892..911982,912822..913008,916177..916402,928311..928373,962343..962387))
location: region:899283-962387:-1
so has part: feature:962343-962387:-1:exon
so has part: feature:928311-928373:-1:exon
so has part: feature:916177-916402:-1:exon
so has part: feature:912822-913008:-1:exon
so has part: feature:911892-911982:-1:exon
so has part: feature:904587-904724:-1:exon
so has part: feature:903948-904066:-1:exon
so has part: feature:903167-903416:-1:exon
so has part: feature:902077-902195:-1:exon
so has part: feature:901467-901577:-1:exon
so has part: feature:900863-900941:-1:exon
so has part: feature:899283-899444:-1:exon

XP_021400540.1
type: Protein
SIO_000068: ncbiprotein

position:899283:-1
position: 899283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:962387:-1
position: 962387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:962343-962387:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:928311-928373:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:916177-916402:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:912822-913008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:911892-911982:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:904587-904724:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:903948-904066:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:903167-903416:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:902077-902195:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:901467-901577:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:900863-900941:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:899283-899444:-1:exon

FBXW11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: FBXW11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 11 isoform X1
translation: MEPDSVIEDKTIELMCSVPRSLWLGCSNLVESMCALRCLQSMPSVRCLQNTSVMEDQNEDESPKKNTLWQISNGTSSVIVSRKRPSEGNYEKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPLSAQNETRSPSRTYTYISR
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(899283..899444,900863..900941,901467..901577,902077..902195,903167..903416,903948..904066,904587..904724,911892..911982,912822..913008,916177..916402,928311..928373,946487..946588,962343..962387))
location: region:899283-962387:-1
so has part: feature:962343-962387:-1:exon
so has part: feature:946487-946588:-1:exon
so has part: feature:928311-928373:-1:exon
so has part: feature:916177-916402:-1:exon
so has part: feature:912822-913008:-1:exon
so has part: feature:911892-911982:-1:exon
so has part: feature:904587-904724:-1:exon
so has part: feature:903948-904066:-1:exon
so has part: feature:903167-903416:-1:exon
so has part: feature:902077-902195:-1:exon
so has part: feature:901467-901577:-1:exon
so has part: feature:900863-900941:-1:exon
so has part: feature:899283-899444:-1:exon

XP_021400539.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:962343-962387:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:946487-946588:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:928311-928373:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:916177-916402:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:912822-913008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:911892-911982:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:904587-904724:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:903948-904066:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:903167-903416:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:902077-902195:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:901467-901577:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:900863-900941:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:899283-899444:-1:exon

FBXW11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: FBXW11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 11 isoform X2
translation: MCALRCLQSMPSVRCLQNTSVMEDQNEDESPKKNTLWQISNGTSSVIVSRKRPSEGNYEKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPLSAQNETRSPSRTYTYISR
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(899283..899444,900863..900941,901467..901577,902077..902195,903167..903416,903948..904066,904587..904724,911892..911982,912822..913008,916177..916402,928311..928373,946487..946537))
location: region:899283-946537:-1
so has part: feature:946487-946537:-1:exon
so has part: feature:928311-928373:-1:exon
so has part: feature:916177-916402:-1:exon
so has part: feature:912822-913008:-1:exon
so has part: feature:911892-911982:-1:exon
so has part: feature:904587-904724:-1:exon
so has part: feature:903948-904066:-1:exon
so has part: feature:903167-903416:-1:exon
so has part: feature:902077-902195:-1:exon
so has part: feature:901467-901577:-1:exon
so has part: feature:900863-900941:-1:exon
so has part: feature:899283-899444:-1:exon

XP_031361900.1
type: Protein
SIO_000068: ncbiprotein

position:946537:-1
position: 946537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:946487-946537:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:928311-928373:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:916177-916402:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:912822-913008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:911892-911982:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:904587-904724:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:903948-904066:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:903167-903416:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:902077-902195:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:901467-901577:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:900863-900941:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:899283-899444:-1:exon

FBXW11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: FBXW11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 11 isoform X4
translation: MEDQNEDESPKKNTLWQISNGTSSVIVSRKRPSEGNYEKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPLSAQNETRSPSRTYTYISR
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(899283..899444,900863..900941,901467..901577,902077..902195,903167..903416,903948..904066,904587..904724,911892..911982,912822..913008,916177..916402,928311..928361))
location: region:899283-928361:-1
so has part: feature:928311-928361:-1:exon
so has part: feature:916177-916402:-1:exon
so has part: feature:912822-913008:-1:exon
so has part: feature:911892-911982:-1:exon
so has part: feature:904587-904724:-1:exon
so has part: feature:903948-904066:-1:exon
so has part: feature:903167-903416:-1:exon
so has part: feature:902077-902195:-1:exon
so has part: feature:901467-901577:-1:exon
so has part: feature:900863-900941:-1:exon
so has part: feature:899283-899444:-1:exon

XP_021400541.1
type: Protein
SIO_000068: ncbiprotein

position:928361:-1
position: 928361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:928311-928361:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:916177-916402:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:912822-913008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:911892-911982:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:904587-904724:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:903948-904066:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:903167-903416:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:902077-902195:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:901467-901577:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:900863-900941:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:899283-899444:-1:exon

ETF1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: ETF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(971474..996266)
location: region:971474-996266:-1
so has part: feature:971474-996266:-1:exon
subclass of: SO_0000010

110478309
type: Gene
SIO_000068: ncbigene

position:971474:-1
position: 971474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:996266:-1
position: 996266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:971474-996266:-1:exon

ETF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ETF1
product: eukaryotic translation termination factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 29 ESTs, 11 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021544867.1
SIO_010081: ETF1
subclass of: SO_0000673
so part of: ETF1
location: complement(join(971474..972320,973625..973772,974858..974922,975451..975606,975965..976094,976568..976758,977652..977790,980959..981098,981835..982010,995962..996266))
location: region:971474-996266:-1
so has part: feature:995962-996266:-1:exon
so has part: feature:981835-982010:-1:exon
so has part: feature:980959-981098:-1:exon
so has part: feature:977652-977790:-1:exon
so has part: feature:976568-976758:-1:exon
so has part: feature:975965-976094:-1:exon
so has part: feature:975451-975606:-1:exon
so has part: feature:974858-974922:-1:exon
so has part: feature:973625-973772:-1:exon
so has part: feature:971474-972320:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:995962-996266:-1:exon

position:995962:-1
position: 995962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:981835-982010:-1:exon

position:981835:-1
position: 981835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:982010:-1
position: 982010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:980959-981098:-1:exon

position:980959:-1
position: 980959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:981098:-1
position: 981098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:977652-977790:-1:exon

position:977652:-1
position: 977652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977790:-1
position: 977790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:976568-976758:-1:exon

position:976568:-1
position: 976568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976758:-1
position: 976758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:975965-976094:-1:exon

position:975965:-1
position: 975965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976094:-1
position: 976094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:975451-975606:-1:exon

position:975451:-1
position: 975451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:975606:-1
position: 975606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:974858-974922:-1:exon

position:974858:-1
position: 974858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974922:-1
position: 974922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:973625-973772:-1:exon

position:973625:-1
position: 973625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973772:-1
position: 973772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:971474-972320:-1:exon

position:972320:-1
position: 972320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ETF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ETF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic peptide chain release factor subunit 1
translation: MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSDMFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALEMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGMEYQGGDDEFFDLDDY
SIO_010081: ETF1
subclass of: SO_0000673
so part of: ETF1
location: complement(join(972238..972320,973625..973772,974858..974922,975451..975606,975965..976094,976568..976758,977652..977790,980959..981098,981835..982010,995962..996047))
location: region:972238-996047:-1
so has part: feature:995962-996047:-1:exon
so has part: feature:981835-982010:-1:exon
so has part: feature:980959-981098:-1:exon
so has part: feature:977652-977790:-1:exon
so has part: feature:976568-976758:-1:exon
so has part: feature:975965-976094:-1:exon
so has part: feature:975451-975606:-1:exon
so has part: feature:974858-974922:-1:exon
so has part: feature:973625-973772:-1:exon
so has part: feature:972238-972320:-1:exon

XP_021400542.1
type: Protein
SIO_000068: ncbiprotein

position:972238:-1
position: 972238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:996047:-1
position: 996047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:995962-996047:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:981835-982010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:980959-981098:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:977652-977790:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:976568-976758:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:975965-976094:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:975451-975606:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:974858-974922:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:973625-973772:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:972238-972320:-1:exon

HSPA9
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: HSPA9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(997253..1018730)
location: region:997253-1018730:-1
so has part: feature:997253-1018730:-1:exon
subclass of: SO_0000010

110478310
type: Gene
SIO_000068: ncbigene

position:997253:-1
position: 997253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1018730:-1
position: 1018730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:997253-1018730:-1:exon

HSPA9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: HSPA9
product: heat shock protein family A (Hsp70) member 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 57 ESTs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021544868.2
SIO_010081: HSPA9
subclass of: SO_0000673
so part of: HSPA9
location: complement(join(997253..998025,998786..998926,1000716..1000808,1002343..1002437,1004755..1004872,1005978..1006082,1006846..1007073,1009330..1009539,1011154..1011246,1011875..1012037,1012823..1012929,1013015..1013088,1014719..1014843,1015503..1015684,1015773..1015860,1017382..1017440,1018644..1018730))
location: region:997253-1018730:-1
so has part: feature:1018644-1018730:-1:exon
so has part: feature:1017382-1017440:-1:exon
so has part: feature:1015773-1015860:-1:exon
so has part: feature:1015503-1015684:-1:exon
so has part: feature:1014719-1014843:-1:exon
so has part: feature:1013015-1013088:-1:exon
so has part: feature:1012823-1012929:-1:exon
so has part: feature:1011875-1012037:-1:exon
so has part: feature:1011154-1011246:-1:exon
so has part: feature:1009330-1009539:-1:exon
so has part: feature:1006846-1007073:-1:exon
so has part: feature:1005978-1006082:-1:exon
so has part: feature:1004755-1004872:-1:exon
so has part: feature:1002343-1002437:-1:exon
so has part: feature:1000716-1000808:-1:exon
so has part: feature:998786-998926:-1:exon
so has part: feature:997253-998025:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1018644-1018730:-1:exon

position:1018644:-1
position: 1018644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1017382-1017440:-1:exon

position:1017382:-1
position: 1017382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1017440:-1
position: 1017440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1015773-1015860:-1:exon

position:1015773:-1
position: 1015773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1015860:-1
position: 1015860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1015503-1015684:-1:exon

position:1015503:-1
position: 1015503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1015684:-1
position: 1015684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1014719-1014843:-1:exon

position:1014719:-1
position: 1014719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1014843:-1
position: 1014843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1013015-1013088:-1:exon

position:1013015:-1
position: 1013015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1013088:-1
position: 1013088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1012823-1012929:-1:exon

position:1012823:-1
position: 1012823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1012929:-1
position: 1012929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1011875-1012037:-1:exon

position:1011875:-1
position: 1011875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1012037:-1
position: 1012037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1011154-1011246:-1:exon

position:1011154:-1
position: 1011154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1011246:-1
position: 1011246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1009330-1009539:-1:exon

position:1009330:-1
position: 1009330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1009539:-1
position: 1009539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1006846-1007073:-1:exon

position:1006846:-1
position: 1006846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1007073:-1
position: 1007073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1005978-1006082:-1:exon

position:1005978:-1
position: 1005978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1006082:-1
position: 1006082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1004755-1004872:-1:exon

position:1004755:-1
position: 1004755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1004872:-1
position: 1004872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1002343-1002437:-1:exon

position:1002343:-1
position: 1002343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1002437:-1
position: 1002437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1000716-1000808:-1:exon

position:1000716:-1
position: 1000716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1000808:-1
position: 1000808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:998786-998926:-1:exon

position:998786:-1
position: 998786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:998926:-1
position: 998926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:997253-998025:-1:exon

position:998025:-1
position: 998025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HSPA9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: HSPA9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stress-70 protein, mitochondrial
translation: MLSASRLPLLLPRAAPAPPARPAQTFWNGLSQNVLRAASSRKYASEAIKGAVIGIDLGTTNSCVAVMEGKQAKVLENAEGARTTPSVVAFTAEGERLVGMPAKRQAVTNPHNTFYATKRLIGRRFDDAEVKKDIKNVPFKIVRASNGDAWVEAHGKLYSPSQIGAFVLMKMKETAENYLGHAAKNAVITVPAYFNDSQRQATKDAGQIAGLNVLRVINEPTAAALAYGLDKSEDKVIAVYDLGGGTFDISVLEIQKGVFEVKSTNGDTFLGGEDFDQALLQYIVKEFKRETGVDLTKDNMALQRVREASEKAKCELSSSVQTDINLPYLTMDASGPKHLNMKLSRAQFEGIVADLIKRTVAPCQKAMQDAEVSKSDIGEVILVGGMTRMPKVQQTVQELFGRAPSKAVNPDEAVAIGAAIQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMASDNKLLGQFTLVGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSSGGLSKDEIENMVKNAEKYAEEDRRRKERVEAVNMAEGIIHDTESKMEEFKDQLPADECNKLKEEIAKMRELLARKDSETGENIRQAATSLQQASLKLFEMAYKKMASEREGSGSPGDQKEEKQ
SIO_010081: HSPA9
subclass of: SO_0000673
so part of: HSPA9
location: complement(join(997966..998025,998786..998926,1000716..1000808,1002343..1002437,1004755..1004872,1005978..1006082,1006846..1007073,1009330..1009539,1011154..1011246,1011875..1012037,1012823..1012929,1013015..1013088,1014719..1014843,1015503..1015684,1015773..1015860,1017382..1017440,1018644..1018715))
location: region:997966-1018715:-1
so has part: feature:1018644-1018715:-1:exon
so has part: feature:1017382-1017440:-1:exon
so has part: feature:1015773-1015860:-1:exon
so has part: feature:1015503-1015684:-1:exon
so has part: feature:1014719-1014843:-1:exon
so has part: feature:1013015-1013088:-1:exon
so has part: feature:1012823-1012929:-1:exon
so has part: feature:1011875-1012037:-1:exon
so has part: feature:1011154-1011246:-1:exon
so has part: feature:1009330-1009539:-1:exon
so has part: feature:1006846-1007073:-1:exon
so has part: feature:1005978-1006082:-1:exon
so has part: feature:1004755-1004872:-1:exon
so has part: feature:1002343-1002437:-1:exon
so has part: feature:1000716-1000808:-1:exon
so has part: feature:998786-998926:-1:exon
so has part: feature:997966-998025:-1:exon

XP_021400543.1
type: Protein
SIO_000068: ncbiprotein

position:997966:-1
position: 997966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1018715:-1
position: 1018715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1018644-1018715:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1017382-1017440:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1015773-1015860:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1015503-1015684:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1014719-1014843:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1013015-1013088:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1012823-1012929:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1011875-1012037:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1011154-1011246:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1009330-1009539:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1006846-1007073:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1005978-1006082:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1004755-1004872:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1002343-1002437:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1000716-1000808:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:998786-998926:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:997966-998025:-1:exon

LOC116184144
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116184144
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1005425..1005493)
location: region:1005425-1005493:-1
so has part: feature:1005425-1005493:-1:exon
subclass of: SO_0000578

116184144
type: Gene
SIO_000068: ncbigene

position:1005425:-1
position: 1005425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1005493:-1
position: 1005493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1005425-1005493:-1:exon

LOC116184144
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: snoRNA
gene: LOC116184144
product: small nucleolar RNA SNORD63
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00154
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004148886.1
SIO_010081: LOC116184144
subclass of: SO_0000673
so part of: LOC116184144
location: complement(1005425..1005493)
location: region:1005425-1005493:-1
so has part: feature:1005425-1005493:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1005425-1005493:-1:exon

LOC116184143
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116184143
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1006534..1006605)
location: region:1006534-1006605:-1
so has part: feature:1006534-1006605:-1:exon
subclass of: SO_0000578

116184143
type: Gene
SIO_000068: ncbigene

position:1006534:-1
position: 1006534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1006605:-1
position: 1006605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1006534-1006605:-1:exon

LOC116184143
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: snoRNA
gene: LOC116184143
product: small nucleolar RNA SNORD63
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00154
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004148885.1
SIO_010081: LOC116184143
subclass of: SO_0000673
so part of: LOC116184143
location: complement(1006534..1006605)
location: region:1006534-1006605:-1
so has part: feature:1006534-1006605:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1006534-1006605:-1:exon

LOC116184133
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116184133
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1031159..1032180
location: region:1031159-1032180:1
so has part: feature:1031159-1032180:1:exon
subclass of: SO_0000011

116184133
type: Gene
SIO_000068: ncbigene

position:1031159:1
position: 1031159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1032180:1
position: 1032180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1031159-1032180:1:exon

LOC116184133
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC116184133
product: uncharacterized LOC116184133, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004148872.1
SIO_010081: LOC116184133
subclass of: SO_0000673
so part of: LOC116184133
location: join(1031159..1031298,1031998..1032180)
location: region:1031159-1032180:1
so has part: feature:1031159-1031298:1:exon
so has part: feature:1031998-1032180:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1031159-1031298:1:exon

position:1031298:1
position: 1031298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1031998-1032180:1:exon

position:1031998:1
position: 1031998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116184133
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC116184133
product: uncharacterized LOC116184133, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004148873.1
SIO_010081: LOC116184133
subclass of: SO_0000673
so part of: LOC116184133
location: join(1031396..1031522,1031998..1032180)
location: region:1031396-1032180:1
so has part: feature:1031396-1031522:1:exon
so has part: feature:1031998-1032180:1:exon

position:1031396:1
position: 1031396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1031396-1031522:1:exon

position:1031522:1
position: 1031522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1031998-1032180:1:exon

CTNNA1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: CTNNA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1132697..1249337
location: region:1132697-1249337:1
so has part: feature:1132697-1249337:1:exon
subclass of: SO_0000010

110478312
type: Gene
SIO_000068: ncbigene

position:1132697:1
position: 1132697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1249337:1
position: 1249337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1132697-1249337:1:exon

CTNNA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: CTNNA1
product: catenin alpha 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 42 ESTs, 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021544869.1
SIO_010081: CTNNA1
subclass of: SO_0000673
so part of: CTNNA1
location: join(1132697..1132800,1149259..1149365,1151200..1151395,1158101..1158267,1159037..1159156,1160976..1161242,1164245..1164448,1200931..1201011,1201796..1201948,1217830..1217922,1228547..1228703,1233794..1233994,1235040..1235191,1237857..1237967,1239435..1239616,1240346..1240451,1245604..1245738,1248202..1249337)
location: region:1132697-1249337:1
so has part: feature:1132697-1132800:1:exon
so has part: feature:1149259-1149365:1:exon
so has part: feature:1151200-1151395:1:exon
so has part: feature:1158101-1158267:1:exon
so has part: feature:1159037-1159156:1:exon
so has part: feature:1160976-1161242:1:exon
so has part: feature:1164245-1164448:1:exon
so has part: feature:1200931-1201011:1:exon
so has part: feature:1201796-1201948:1:exon
so has part: feature:1217830-1217922:1:exon
so has part: feature:1228547-1228703:1:exon
so has part: feature:1233794-1233994:1:exon
so has part: feature:1235040-1235191:1:exon
so has part: feature:1237857-1237967:1:exon
so has part: feature:1239435-1239616:1:exon
so has part: feature:1240346-1240451:1:exon
so has part: feature:1245604-1245738:1:exon
so has part: feature:1248202-1249337:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1132697-1132800:1:exon

position:1132800:1
position: 1132800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1149259-1149365:1:exon

position:1149259:1
position: 1149259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1149365:1
position: 1149365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1151200-1151395:1:exon

position:1151200:1
position: 1151200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1151395:1
position: 1151395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1158101-1158267:1:exon

position:1158101:1
position: 1158101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1158267:1
position: 1158267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1159037-1159156:1:exon

position:1159037:1
position: 1159037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1159156:1
position: 1159156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1160976-1161242:1:exon

position:1160976:1
position: 1160976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1161242:1
position: 1161242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1164245-1164448:1:exon

position:1164245:1
position: 1164245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1164448:1
position: 1164448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1200931-1201011:1:exon

position:1200931:1
position: 1200931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1201011:1
position: 1201011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1201796-1201948:1:exon

position:1201796:1
position: 1201796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1201948:1
position: 1201948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1217830-1217922:1:exon

position:1217830:1
position: 1217830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1217922:1
position: 1217922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1228547-1228703:1:exon

position:1228547:1
position: 1228547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1228703:1
position: 1228703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1233794-1233994:1:exon

position:1233794:1
position: 1233794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1233994:1
position: 1233994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1235040-1235191:1:exon

position:1235040:1
position: 1235040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1235191:1
position: 1235191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1237857-1237967:1:exon

position:1237857:1
position: 1237857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1237967:1
position: 1237967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1239435-1239616:1:exon

position:1239435:1
position: 1239435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1239616:1
position: 1239616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1240346-1240451:1:exon

position:1240346:1
position: 1240346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1240451:1
position: 1240451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1245604-1245738:1:exon

position:1245604:1
position: 1245604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1245738:1
position: 1245738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1248202-1249337:1:exon

position:1248202:1
position: 1248202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CTNNA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: CTNNA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: catenin alpha-1 isoform X1
translation: MTAVTAANVNFKWDPKSLEIRTLAVERLLEPLVTQVTTLVNTSNKGPSNKKRGRSKKAHVLAASVEQATENFLEKGDKIAKESQFLKDELVAAVEDVRKQGDLMKSASGEFADDPCSSVKRGNMVRAARALLSAVTRLLILADMADVYKLLVQLKVVEDGILKLRNAGTEQDLGIQYKALKPEVDKLNIMAAKRQQELKDVGHRDQMAAARGILQKNVPILYTASQACLQHPDVAAYKANRDLIYKQLQQAVSGISNAAQATASDDAAQQQGGGGELAYALNNFDKQIIVDPSTFSEERFRPSLEERLESIISGAALMADSSCTRDDRRERIVAECNAVRQALQDLLSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKNGNEKEVKEYAQVFREHANKLIEVANLACSISNNEEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWERQVRVLTDAVDDITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNYEPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIRDIRKAVLMIRTPEELDDSDFETEDFDVRSRTSIQTEDDQLIAGQSARAIMAQLPQEQKAKIAEQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQNLGGELVVSGVDSAMSLIQAAKNLMNAVVQTVKASYVASTKYQKSQGMASLNLPAVSWKMKAPEKKPLVKREKQDETQTKIKRASQKKHVNPVQALSEFKAMESI
SIO_010081: CTNNA1
subclass of: SO_0000673
so part of: CTNNA1
location: join(1149261..1149365,1151200..1151395,1158101..1158267,1159037..1159156,1160976..1161242,1164245..1164448,1200931..1201011,1201796..1201948,1217830..1217922,1228547..1228703,1233794..1233994,1235040..1235191,1237857..1237967,1239435..1239616,1240346..1240451,1245604..1245738,1248202..1248489)
location: region:1149261-1248489:1
so has part: feature:1149261-1149365:1:exon
so has part: feature:1151200-1151395:1:exon
so has part: feature:1158101-1158267:1:exon
so has part: feature:1159037-1159156:1:exon
so has part: feature:1160976-1161242:1:exon
so has part: feature:1164245-1164448:1:exon
so has part: feature:1200931-1201011:1:exon
so has part: feature:1201796-1201948:1:exon
so has part: feature:1217830-1217922:1:exon
so has part: feature:1228547-1228703:1:exon
so has part: feature:1233794-1233994:1:exon
so has part: feature:1235040-1235191:1:exon
so has part: feature:1237857-1237967:1:exon
so has part: feature:1239435-1239616:1:exon
so has part: feature:1240346-1240451:1:exon
so has part: feature:1245604-1245738:1:exon
so has part: feature:1248202-1248489:1:exon

XP_021400544.1
type: Protein
SIO_000068: ncbiprotein

position:1149261:1
position: 1149261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1248489:1
position: 1248489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1149261-1149365:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1151200-1151395:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1158101-1158267:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1159037-1159156:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1160976-1161242:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1164245-1164448:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1200931-1201011:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1201796-1201948:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1217830-1217922:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1228547-1228703:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1233794-1233994:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1235040-1235191:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1237857-1237967:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1239435-1239616:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1240346-1240451:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1245604-1245738:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1248202-1248489:1:exon

LRRTM2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LRRTM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1190757..1193605)
location: region:1190757-1193605:-1
so has part: feature:1190757-1193605:-1:exon
subclass of: SO_0000010

110478313
type: Gene
SIO_000068: ncbigene

position:1190757:-1
position: 1190757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1193605:-1
position: 1193605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1190757-1193605:-1:exon

LRRTM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LRRTM2
product: leucine rich repeat transmembrane neuronal 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021544874.2
SIO_010081: LRRTM2
subclass of: SO_0000673
so part of: LRRTM2
location: complement(join(1190757..1192383,1193162..1193605))
location: region:1190757-1193605:-1
so has part: feature:1193162-1193605:-1:exon
so has part: feature:1190757-1192383:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1193162-1193605:-1:exon

position:1193162:-1
position: 1193162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1190757-1192383:-1:exon

position:1192383:-1
position: 1192383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRRTM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LRRTM2
product: leucine rich repeat transmembrane neuronal 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021544872.2
SIO_010081: LRRTM2
subclass of: SO_0000673
so part of: LRRTM2
location: complement(join(1190757..1192404,1193162..1193605))
location: region:1190757-1193605:-1
so has part: feature:1193162-1193605:-1:exon
so has part: feature:1190757-1192404:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1193162-1193605:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1190757-1192404:-1:exon

position:1192404:-1
position: 1192404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRRTM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LRRTM2
product: leucine rich repeat transmembrane neuronal 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_021544871.2
SIO_010081: LRRTM2
subclass of: SO_0000673
so part of: LRRTM2
location: complement(join(1190757..1192832,1193162..1193605))
location: region:1190757-1193605:-1
so has part: feature:1193162-1193605:-1:exon
so has part: feature:1190757-1192832:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1193162-1193605:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1190757-1192832:-1:exon

position:1192832:-1
position: 1192832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRRTM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LRRTM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat transmembrane neuronal protein 2 isoform X3
translation: MHPPMYSKEWLFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLAKLDLTGNEIKAIDLTVFETMPNLKTLLMDNNKLTTLDSKILSSLTSLTTVGLSGNLWECSPKICSLATWLSGFQGRWEHSILCHSPDHTQGEDILDAVYGFQLCWNLSTVVTPVATTSYTAPTTEYTKRISSSHFHVGDKEIPTTAGMVVTTEEQFPEPNNAIFTQRVITGTMALLFSFFFIIFIVFISRKCCPPTLRRIRQCSMIQNHRQLRSQTRLHMANMSDQGPYNEYEPTHEGPFIIINGYGQCKCQQLPYKECEV
SIO_010081: LRRTM2
subclass of: SO_0000673
so part of: LRRTM2
location: complement(join(1191283..1192383,1193162..1193191))
location: region:1191283-1193191:-1
so has part: feature:1193162-1193191:-1:exon
so has part: feature:1191283-1192383:-1:exon

XP_021400549.1
type: Protein
SIO_000068: ncbiprotein

position:1191283:-1
position: 1191283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1193191:-1
position: 1193191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1193162-1193191:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1191283-1192383:-1:exon

LRRTM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LRRTM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat transmembrane neuronal protein 2 isoform X2
translation: MHPPMYSKEWLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLAKLDLTGNEIKAIDLTVFETMPNLKTLLMDNNKLTTLDSKILSSLTSLTTVGLSGNLWECSPKICSLATWLSGFQGRWEHSILCHSPDHTQGEDILDAVYGFQLCWNLSTVVTPVATTSYTAPTTEYTKRISSSHFHVGDKEIPTTAGMVVTTEEQFPEPNNAIFTQRVITGTMALLFSFFFIIFIVFISRKCCPPTLRRIRQCSMIQNHRQLRSQTRLHMANMSDQGPYNEYEPTHEGPFIIINGYGQCKCQQLPYKECEV
SIO_010081: LRRTM2
subclass of: SO_0000673
so part of: LRRTM2
location: complement(join(1191283..1192404,1193162..1193191))
location: region:1191283-1193191:-1
so has part: feature:1193162-1193191:-1:exon
so has part: feature:1191283-1192404:-1:exon

XP_021400547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1193162-1193191:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1191283-1192404:-1:exon

LRRTM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LRRTM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat transmembrane neuronal protein 2 isoform X1
translation: MGLHFKWPLGARMLAALYAMSMVLKMLPALGMACPPKCRCEKLLFYCDSQGFHSVPNTTEKGSLGLSLRHNYISELERDQFASFSQLTWLHLDHNQIATVREDSFQGLYKLKELVLSSNKIFHLPNTTFSQLLNLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLAKLDLTGNEIKAIDLTVFETMPNLKTLLMDNNKLTTLDSKILSSLTSLTTVGLSGNLWECSPKICSLATWLSGFQGRWEHSILCHSPDHTQGEDILDAVYGFQLCWNLSTVVTPVATTSYTAPTTEYTKRISSSHFHVGDKEIPTTAGMVVTTEEQFPEPNNAIFTQRVITGTMALLFSFFFIIFIVFISRKCCPPTLRRIRQCSMIQNHRQLRSQTRLHMANMSDQGPYNEYEPTHEGPFIIINGYGQCKCQQLPYKECEV
SIO_010081: LRRTM2
subclass of: SO_0000673
so part of: LRRTM2
location: complement(join(1191283..1192832,1193162..1193165))
location: region:1191283-1193165:-1
so has part: feature:1193162-1193165:-1:exon
so has part: feature:1191283-1192832:-1:exon

XP_021400546.1
type: Protein
SIO_000068: ncbiprotein

position:1193165:-1
position: 1193165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1193162-1193165:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1191283-1192832:-1:exon

CTNNA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: CTNNA1
product: catenin alpha 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021544870.2
SIO_010081: CTNNA1
subclass of: SO_0000673
so part of: CTNNA1
location: join(1193666..1193965,1200931..1201011,1201796..1201948,1217830..1217922,1228547..1228703,1233794..1233994,1235040..1235191,1237857..1237967,1239435..1239616,1240346..1240451,1245604..1245738,1248202..1248793)
location: region:1193666-1248793:1
so has part: feature:1193666-1193965:1:exon
so has part: feature:1200931-1201011:1:exon
so has part: feature:1201796-1201948:1:exon
so has part: feature:1217830-1217922:1:exon
so has part: feature:1228547-1228703:1:exon
so has part: feature:1233794-1233994:1:exon
so has part: feature:1235040-1235191:1:exon
so has part: feature:1237857-1237967:1:exon
so has part: feature:1239435-1239616:1:exon
so has part: feature:1240346-1240451:1:exon
so has part: feature:1245604-1245738:1:exon
so has part: feature:1248202-1248793:1:exon

position:1193666:1
position: 1193666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1248793:1
position: 1248793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1193666-1193965:1:exon

position:1193965:1
position: 1193965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1200931-1201011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1201796-1201948:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1217830-1217922:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1228547-1228703:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1233794-1233994:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1235040-1235191:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1237857-1237967:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1239435-1239616:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1240346-1240451:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1245604-1245738:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1248202-1248793:1:exon

CTNNA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: CTNNA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: catenin alpha-1 isoform X2
translation: MEAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKNGNEKEVKEYAQVFREHANKLIEVANLACSISNNEEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWERQVRVLTDAVDDITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNYEPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIRDIRKAVLMIRTPEELDDSDFETEDFDVRSRTSIQTEDDQLIAGQSARAIMAQLPQEQKAKIAEQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQNLGGELVVSGVDSAMSLIQAAKNLMNAVVQTVKASYVASTKYQKSQGMASLNLPAVSWKMKAPEKKPLVKREKQDETQTKIKRASQKKHVNPVQALSEFKAMESI
SIO_010081: CTNNA1
subclass of: SO_0000673
so part of: CTNNA1
location: join(1193960..1193965,1200931..1201011,1201796..1201948,1217830..1217922,1228547..1228703,1233794..1233994,1235040..1235191,1237857..1237967,1239435..1239616,1240346..1240451,1245604..1245738,1248202..1248489)
location: region:1193960-1248489:1
so has part: feature:1193960-1193965:1:exon
so has part: feature:1200931-1201011:1:exon
so has part: feature:1201796-1201948:1:exon
so has part: feature:1217830-1217922:1:exon
so has part: feature:1228547-1228703:1:exon
so has part: feature:1233794-1233994:1:exon
so has part: feature:1235040-1235191:1:exon
so has part: feature:1237857-1237967:1:exon
so has part: feature:1239435-1239616:1:exon
so has part: feature:1240346-1240451:1:exon
so has part: feature:1245604-1245738:1:exon
so has part: feature:1248202-1248489:1:exon

XP_021400545.1
type: Protein
SIO_000068: ncbiprotein

position:1193960:1
position: 1193960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1193960-1193965:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1200931-1201011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1201796-1201948:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1217830-1217922:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1228547-1228703:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1233794-1233994:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1235040-1235191:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1237857-1237967:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1239435-1239616:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1240346-1240451:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1245604-1245738:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1248202-1248489:1:exon

SIL1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SIL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1253976..1317247)
location: region:1253976-1317247:-1
so has part: feature:1253976-1317247:-1:exon
subclass of: SO_0000010

110478307
type: Gene
SIO_000068: ncbigene

position:1253976:-1
position: 1253976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1317247:-1
position: 1317247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1253976-1317247:-1:exon

SIL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SIL1
product: SIL1 nucleotide exchange factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031506052.1
SIO_010081: SIL1
subclass of: SO_0000673
so part of: SIL1
location: complement(join(1253976..1254474,1256189..1256353,1258729..1258825,1286723..1286844,1291333..1291691,1298611..1298746,1300942..1301056,1316965..1317247))
location: region:1253976-1317247:-1
so has part: feature:1316965-1317247:-1:exon
so has part: feature:1300942-1301056:-1:exon
so has part: feature:1298611-1298746:-1:exon
so has part: feature:1291333-1291691:-1:exon
so has part: feature:1286723-1286844:-1:exon
so has part: feature:1258729-1258825:-1:exon
so has part: feature:1256189-1256353:-1:exon
so has part: feature:1253976-1254474:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1316965-1317247:-1:exon

position:1316965:-1
position: 1316965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1300942-1301056:-1:exon

position:1300942:-1
position: 1300942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1301056:-1
position: 1301056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1298611-1298746:-1:exon

position:1298611:-1
position: 1298611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1298746:-1
position: 1298746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1291333-1291691:-1:exon

position:1291333:-1
position: 1291333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1291691:-1
position: 1291691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1286723-1286844:-1:exon

position:1286723:-1
position: 1286723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1286844:-1
position: 1286844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1258729-1258825:-1:exon

position:1258729:-1
position: 1258729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1258825:-1
position: 1258825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1256189-1256353:-1:exon

position:1256189:-1
position: 1256189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1256353:-1
position: 1256353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1253976-1254474:-1:exon

position:1254474:-1
position: 1254474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SIL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SIL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleotide exchange factor SIL1
translation: MLPLPDGCSHFGKVRSLSNLRLLCRLLVLLLSDRGGFATAWEAQSHNLLKGERLGVCRLVAMSPWAGLLSTTARVSLLLLLGSVLFSCSSLGHRVPEFALTKIEESDMKDDSGKEPGTEDDADPEDLEVFYPTDQWQTLRPEGPSNPVPEPLMHSNKSIGTDSQVPFVNLGLAFLSVFVLSLFILYLHIWFLPSVSKAREEEVRKKFRPIEQLKEEFEKLNMKIETDYEIMVKLISKFNSSASTLDEKVAALYDLEYYVHQVDNAKDFLSMGGLRLVIEGLNSSEASLKEHAAFVLGAALSSNPKVQIEAIEGGALQKLLVILATDQPLAVRKKALFALSSMLRHFPYAQQQFLKLGGLQVLRSLFRQKGMEPLHVRVVTLLYDLIMEKMLLEDSQHGEQMEEKIQQYQQVRLVPAVVEQGWCALVPNLLAMPEHDTREKVLKLVGVLVAFCREHYRGDPALGTTLRLLRSEYEELAAEEQREGDKDGYFRELLGSVNTIIQELR
SIO_010081: SIL1
subclass of: SO_0000673
so part of: SIL1
location: complement(join(1254124..1254474,1256189..1256353,1258729..1258825,1286723..1286844,1291333..1291691,1298611..1298746,1300942..1301056,1316965..1317137))
location: region:1254124-1317137:-1
so has part: feature:1316965-1317137:-1:exon
so has part: feature:1300942-1301056:-1:exon
so has part: feature:1298611-1298746:-1:exon
so has part: feature:1291333-1291691:-1:exon
so has part: feature:1286723-1286844:-1:exon
so has part: feature:1258729-1258825:-1:exon
so has part: feature:1256189-1256353:-1:exon
so has part: feature:1254124-1254474:-1:exon

XP_031361912.1
type: Protein
SIO_000068: ncbiprotein

position:1254124:-1
position: 1254124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1317137:-1
position: 1317137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1316965-1317137:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1300942-1301056:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1298611-1298746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1291333-1291691:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1286723-1286844:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1258729-1258825:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1256189-1256353:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1254124-1254474:-1:exon

LOC110477379
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110477379
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1336033..1338009
location: region:1336033-1338009:1
so has part: feature:1336033-1338009:1:exon
subclass of: SO_0000011

110477379
type: Gene
SIO_000068: ncbigene

position:1336033:1
position: 1336033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1338009:1
position: 1338009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1336033-1338009:1:exon

LOC110477379
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110477379
product: uncharacterized LOC110477379
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_002466583.1
SIO_010081: LOC110477379
subclass of: SO_0000673
so part of: LOC110477379
location: join(1336033..1336139,1336421..1336624,1337234..1338009)
location: region:1336033-1338009:1
so has part: feature:1336033-1336139:1:exon
so has part: feature:1336421-1336624:1:exon
so has part: feature:1337234-1338009:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1336033-1336139:1:exon

position:1336139:1
position: 1336139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1336421-1336624:1:exon

position:1336421:1
position: 1336421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1336624:1
position: 1336624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1337234-1338009:1:exon

position:1337234:1
position: 1337234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116184142
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116184142
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1336889..1337091
location: region:1336889-1337091:1
so has part: feature:1336889-1337091:1:exon
subclass of: SO_0000578

116184142
type: Gene
SIO_000068: ncbigene

position:1336889:1
position: 1336889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1337091:1
position: 1337091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1336889-1337091:1:exon

LOC116184142
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: snoRNA
gene: LOC116184142
product: small nucleolar RNA SNORA74
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00090
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004148884.1
SIO_010081: LOC116184142
subclass of: SO_0000673
so part of: LOC116184142
location: 1336889..1337091
location: region:1336889-1337091:1
so has part: feature:1336889-1337091:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1336889-1337091:1:exon

MATR3
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: MATR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1340273..1365710
location: region:1340273-1365710:1
so has part: feature:1340273-1365710:1:exon
subclass of: SO_0000010

110477372
type: Gene
SIO_000068: ncbigene

position:1340273:1
position: 1340273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1365710:1
position: 1365710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1340273-1365710:1:exon

MATR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: MATR3
product: matrin 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 51 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_021543101.2
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: join(1340273..1340357,1353304..1353365,1353924..1353965,1354217..1354320,1355450..1355502,1355978..1356103,1356702..1356827,1357014..1357184,1358415..1358546,1359562..1359605,1360073..1360463,1362033..1362429,1363012..1363133,1364616..1365710)
location: region:1340273-1365710:1
so has part: feature:1340273-1340357:1:exon
so has part: feature:1353304-1353365:1:exon
so has part: feature:1353924-1353965:1:exon
so has part: feature:1354217-1354320:1:exon
so has part: feature:1355450-1355502:1:exon
so has part: feature:1355978-1356103:1:exon
so has part: feature:1356702-1356827:1:exon
so has part: feature:1357014-1357184:1:exon
so has part: feature:1358415-1358546:1:exon
so has part: feature:1359562-1359605:1:exon
so has part: feature:1360073-1360463:1:exon
so has part: feature:1362033-1362429:1:exon
so has part: feature:1363012-1363133:1:exon
so has part: feature:1364616-1365710:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1340273-1340357:1:exon

position:1340357:1
position: 1340357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1353304-1353365:1:exon

position:1353304:1
position: 1353304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1353365:1
position: 1353365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1353924-1353965:1:exon

position:1353924:1
position: 1353924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1353965:1
position: 1353965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1354217-1354320:1:exon

position:1354217:1
position: 1354217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1354320:1
position: 1354320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1355450-1355502:1:exon

position:1355450:1
position: 1355450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1355502:1
position: 1355502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1355978-1356103:1:exon

position:1355978:1
position: 1355978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1356103:1
position: 1356103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1356702-1356827:1:exon

position:1356702:1
position: 1356702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1356827:1
position: 1356827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1357014-1357184:1:exon

position:1357014:1
position: 1357014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1357184:1
position: 1357184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1358415-1358546:1:exon

position:1358415:1
position: 1358415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1358546:1
position: 1358546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1359562-1359605:1:exon

position:1359562:1
position: 1359562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1359605:1
position: 1359605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1360073-1360463:1:exon

position:1360073:1
position: 1360073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1360463:1
position: 1360463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1362033-1362429:1:exon

position:1362033:1
position: 1362033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1362429:1
position: 1362429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1363012-1363133:1:exon

position:1363012:1
position: 1363012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1363133:1
position: 1363133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1364616-1365710:1:exon

position:1364616:1
position: 1364616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MATR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: MATR3
product: matrin 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 66 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_021543099.2
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: join(1340281..1340357,1347962..1349033,1353304..1353365,1353924..1353965,1354217..1354320,1355450..1355502,1355978..1356103,1356702..1356827,1357014..1357184,1358415..1358546,1359562..1359605,1360073..1360463,1362033..1362429,1363012..1363133,1364616..1365710)
location: region:1340281-1365710:1
so has part: feature:1340281-1340357:1:exon
so has part: feature:1347962-1349033:1:exon
so has part: feature:1353304-1353365:1:exon
so has part: feature:1353924-1353965:1:exon
so has part: feature:1354217-1354320:1:exon
so has part: feature:1355450-1355502:1:exon
so has part: feature:1355978-1356103:1:exon
so has part: feature:1356702-1356827:1:exon
so has part: feature:1357014-1357184:1:exon
so has part: feature:1358415-1358546:1:exon
so has part: feature:1359562-1359605:1:exon
so has part: feature:1360073-1360463:1:exon
so has part: feature:1362033-1362429:1:exon
so has part: feature:1363012-1363133:1:exon
so has part: feature:1364616-1365710:1:exon

position:1340281:1
position: 1340281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1340281-1340357:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1347962-1349033:1:exon

position:1347962:1
position: 1347962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1349033:1
position: 1349033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1353304-1353365:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1353924-1353965:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1354217-1354320:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1355450-1355502:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1355978-1356103:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1356702-1356827:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1357014-1357184:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1358415-1358546:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1359562-1359605:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1360073-1360463:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1362033-1362429:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1363012-1363133:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1364616-1365710:1:exon

MATR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: MATR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrin-3 isoform X3
translation: MSGARAAGWRRAVQRRSRESTEWNHHINGATHSRRCQLLLEIYPEWNPDSDSGHGMGDPFMLQQSTNPAPGILGPPPPPFHLGGPPVGPRGAGNGNMQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQLLQLVEPFGIITNHLILNKINEAFIEMSTTEDAQAAVEYYSTTPALVFGKPVRVHLSQKYKRIKKPEGKPDQKTEPPKPELGRVIHLSNLPHSGYSDNAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDALAMVEHCANKALWFQGRCVKVDLSEKYKKLVLRIPNKGVELLKKDKTRKRTYSPDSKDSPSDKKSKTEPAQKPESGNTEEKAKEEKQEDAAEPSSAKSGEQTEQDEPSLLLESEDELLVDEEEAAALLESGSSAGEDADVANLADVATEEKKDTPDDATVKTEGNVAATPAAKKKLKKRYVGGFPRSMEGFVTLDEVGDEEDSDHQKLRKSGLAAKAAGKSEDSLAEIKVDKIEEPEQESETLENGTKSEENAKAESVEASDATTAAQDTEKNAQENTDPQGEQETKSALEKPLVPDEFRIGPYQPNIPVGVNYVVPKTGFYCKLCSLFYTNEDVAKKTHCSSLPHYQKLKKILDKMAEDFRQKKEG
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: join(1340295..1340357,1353304..1353365,1353924..1353965,1354217..1354320,1355450..1355502,1355978..1356103,1356702..1356827,1357014..1357184,1358415..1358546,1359562..1359605,1360073..1360463,1362033..1362429,1363012..1363133,1364616..1364666)
location: region:1340295-1364666:1
so has part: feature:1340295-1340357:1:exon
so has part: feature:1353304-1353365:1:exon
so has part: feature:1353924-1353965:1:exon
so has part: feature:1354217-1354320:1:exon
so has part: feature:1355450-1355502:1:exon
so has part: feature:1355978-1356103:1:exon
so has part: feature:1356702-1356827:1:exon
so has part: feature:1357014-1357184:1:exon
so has part: feature:1358415-1358546:1:exon
so has part: feature:1359562-1359605:1:exon
so has part: feature:1360073-1360463:1:exon
so has part: feature:1362033-1362429:1:exon
so has part: feature:1363012-1363133:1:exon
so has part: feature:1364616-1364666:1:exon

XP_021398776.1
type: Protein
SIO_000068: ncbiprotein

position:1340295:1
position: 1340295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1364666:1
position: 1364666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1340295-1340357:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1353304-1353365:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1353924-1353965:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1354217-1354320:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1355450-1355502:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1355978-1356103:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1356702-1356827:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1357014-1357184:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1358415-1358546:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1359562-1359605:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1360073-1360463:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1362033-1362429:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1363012-1363133:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1364616-1364666:1:exon

MATR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: MATR3
product: matrin 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 65 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_021543098.2
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: join(1340452..1340713,1347962..1349033,1353304..1353365,1353924..1353965,1354217..1354320,1355450..1355502,1355978..1356103,1356702..1356827,1357014..1357184,1358415..1358546,1359562..1359605,1360073..1360463,1362033..1362429,1363012..1363133,1364616..1365710)
location: region:1340452-1365710:1
so has part: feature:1340452-1340713:1:exon
so has part: feature:1347962-1349033:1:exon
so has part: feature:1353304-1353365:1:exon
so has part: feature:1353924-1353965:1:exon
so has part: feature:1354217-1354320:1:exon
so has part: feature:1355450-1355502:1:exon
so has part: feature:1355978-1356103:1:exon
so has part: feature:1356702-1356827:1:exon
so has part: feature:1357014-1357184:1:exon
so has part: feature:1358415-1358546:1:exon
so has part: feature:1359562-1359605:1:exon
so has part: feature:1360073-1360463:1:exon
so has part: feature:1362033-1362429:1:exon
so has part: feature:1363012-1363133:1:exon
so has part: feature:1364616-1365710:1:exon

position:1340452:1
position: 1340452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1340452-1340713:1:exon

position:1340713:1
position: 1340713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1347962-1349033:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1353304-1353365:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1353924-1353965:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1354217-1354320:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1355450-1355502:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1355978-1356103:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1356702-1356827:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1357014-1357184:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1358415-1358546:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1359562-1359605:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1360073-1360463:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1362033-1362429:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1363012-1363133:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1364616-1365710:1:exon

MATR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: MATR3
product: matrin 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021543100.2
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: join(1340452..1340713,1347962..1349033,1353304..1353365,1353924..1353965,1354217..1354320,1355450..1355502,1355978..1356103,1356702..1356827,1357014..1357184,1358415..1358546,1359562..1359605,1360073..1360463,1362033..1362429,1364616..1365710)
location: region:1340452-1365710:1
so has part: feature:1340452-1340713:1:exon
so has part: feature:1347962-1349033:1:exon
so has part: feature:1353304-1353365:1:exon
so has part: feature:1353924-1353965:1:exon
so has part: feature:1354217-1354320:1:exon
so has part: feature:1355450-1355502:1:exon
so has part: feature:1355978-1356103:1:exon
so has part: feature:1356702-1356827:1:exon
so has part: feature:1357014-1357184:1:exon
so has part: feature:1358415-1358546:1:exon
so has part: feature:1359562-1359605:1:exon
so has part: feature:1360073-1360463:1:exon
so has part: feature:1362033-1362429:1:exon
so has part: feature:1364616-1365710:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1340452-1340713:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1347962-1349033:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1353304-1353365:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1353924-1353965:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1354217-1354320:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1355450-1355502:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1355978-1356103:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1356702-1356827:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1357014-1357184:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1358415-1358546:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1359562-1359605:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1360073-1360463:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1362033-1362429:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1364616-1365710:1:exon

MATR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: MATR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrin-3 isoform X1
translation: MSKSFQQSSLSRDSQGHGRDLSAGIGLLAAATQSLNMPASLGRMNQGTARLASLMNLGMSSSLNQQGSHSALSSGSTSSHNLQSIFNIGSRGPLPLSSQHRGDADQATNILASFGLSARDLDELSRYPEDKITPENLPQILLQLKRRRAEEGYGRDGRSSTREPPYRVPRDDWEEKRHFRRDSFDDRGPSLNPVVDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDESFYGETSHNYHKFDSEYDRMGRGPGPERSLFEKKRGAPPNSNIEDFHGFLPKGYPHLCSICDMPVHSNKEWNHHINGATHSRRCQLLLEIYPEWNPDSDSGHGMGDPFMLQQSTNPAPGILGPPPPPFHLGGPPVGPRGAGNGNMQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQLLQLVEPFGIITNHLILNKINEAFIEMSTTEDAQAAVEYYSTTPALVFGKPVRVHLSQKYKRIKKPEGKPDQKTEPPKPELGRVIHLSNLPHSGYSDNAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDALAMVEHCANKALWFQGRCVKVDLSEKYKKLVLRIPNKGVELLKKDKTRKRTYSPDSKDSPSDKKSKTEPAQKPESGNTEEKAKEEKQEDAAEPSSAKSGEQTEQDEPSLLLESEDELLVDEEEAAALLESGSSAGEDADVANLADVATEEKKDTPDDATVKTEGNVAATPAAKKKLKKRYVGGFPRSMEGFVTLDEVGDEEDSDHQKLRKSGLAAKAAGKSEDSLAEIKVDKIEEPEQESETLENGTKSEENAKAESVEASDATTAAQDTEKNAQENTDPQGEQETKSALEKPLVPDEFRIGPYQPNIPVGVNYVVPKTGFYCKLCSLFYTNEDVAKKTHCSSLPHYQKLKKILDKMAEDFRQKKEG
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: join(1348143..1349033,1353304..1353365,1353924..1353965,1354217..1354320,1355450..1355502,1355978..1356103,1356702..1356827,1357014..1357184,1358415..1358546,1359562..1359605,1360073..1360463,1362033..1362429,1363012..1363133,1364616..1364666)
location: region:1348143-1364666:1
so has part: feature:1348143-1349033:1:exon
so has part: feature:1353304-1353365:1:exon
so has part: feature:1353924-1353965:1:exon
so has part: feature:1354217-1354320:1:exon
so has part: feature:1355450-1355502:1:exon
so has part: feature:1355978-1356103:1:exon
so has part: feature:1356702-1356827:1:exon
so has part: feature:1357014-1357184:1:exon
so has part: feature:1358415-1358546:1:exon
so has part: feature:1359562-1359605:1:exon
so has part: feature:1360073-1360463:1:exon
so has part: feature:1362033-1362429:1:exon
so has part: feature:1363012-1363133:1:exon
so has part: feature:1364616-1364666:1:exon

XP_021398773.1
type: Protein
SIO_000068: ncbiprotein

position:1348143:1
position: 1348143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1348143-1349033:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1353304-1353365:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1353924-1353965:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1354217-1354320:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1355450-1355502:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1355978-1356103:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1356702-1356827:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1357014-1357184:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1358415-1358546:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1359562-1359605:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1360073-1360463:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1362033-1362429:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1363012-1363133:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1364616-1364666:1:exon

MATR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: MATR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrin-3 isoform X1
translation: MSKSFQQSSLSRDSQGHGRDLSAGIGLLAAATQSLNMPASLGRMNQGTARLASLMNLGMSSSLNQQGSHSALSSGSTSSHNLQSIFNIGSRGPLPLSSQHRGDADQATNILASFGLSARDLDELSRYPEDKITPENLPQILLQLKRRRAEEGYGRDGRSSTREPPYRVPRDDWEEKRHFRRDSFDDRGPSLNPVVDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDESFYGETSHNYHKFDSEYDRMGRGPGPERSLFEKKRGAPPNSNIEDFHGFLPKGYPHLCSICDMPVHSNKEWNHHINGATHSRRCQLLLEIYPEWNPDSDSGHGMGDPFMLQQSTNPAPGILGPPPPPFHLGGPPVGPRGAGNGNMQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQLLQLVEPFGIITNHLILNKINEAFIEMSTTEDAQAAVEYYSTTPALVFGKPVRVHLSQKYKRIKKPEGKPDQKTEPPKPELGRVIHLSNLPHSGYSDNAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDALAMVEHCANKALWFQGRCVKVDLSEKYKKLVLRIPNKGVELLKKDKTRKRTYSPDSKDSPSDKKSKTEPAQKPESGNTEEKAKEEKQEDAAEPSSAKSGEQTEQDEPSLLLESEDELLVDEEEAAALLESGSSAGEDADVANLADVATEEKKDTPDDATVKTEGNVAATPAAKKKLKKRYVGGFPRSMEGFVTLDEVGDEEDSDHQKLRKSGLAAKAAGKSEDSLAEIKVDKIEEPEQESETLENGTKSEENAKAESVEASDATTAAQDTEKNAQENTDPQGEQETKSALEKPLVPDEFRIGPYQPNIPVGVNYVVPKTGFYCKLCSLFYTNEDVAKKTHCSSLPHYQKLKKILDKMAEDFRQKKEG
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: join(1348143..1349033,1353304..1353365,1353924..1353965,1354217..1354320,1355450..1355502,1355978..1356103,1356702..1356827,1357014..1357184,1358415..1358546,1359562..1359605,1360073..1360463,1362033..1362429,1363012..1363133,1364616..1364666)
location: region:1348143-1364666:1
so has part: feature:1348143-1349033:1:exon
so has part: feature:1353304-1353365:1:exon
so has part: feature:1353924-1353965:1:exon
so has part: feature:1354217-1354320:1:exon
so has part: feature:1355450-1355502:1:exon
so has part: feature:1355978-1356103:1:exon
so has part: feature:1356702-1356827:1:exon
so has part: feature:1357014-1357184:1:exon
so has part: feature:1358415-1358546:1:exon
so has part: feature:1359562-1359605:1:exon
so has part: feature:1360073-1360463:1:exon
so has part: feature:1362033-1362429:1:exon
so has part: feature:1363012-1363133:1:exon
so has part: feature:1364616-1364666:1:exon

XP_021398774.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1348143-1349033:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1353304-1353365:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1353924-1353965:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1354217-1354320:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1355450-1355502:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1355978-1356103:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1356702-1356827:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1357014-1357184:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1358415-1358546:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1359562-1359605:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1360073-1360463:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1362033-1362429:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1363012-1363133:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1364616-1364666:1:exon

MATR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: MATR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrin-3 isoform X2
translation: MSKSFQQSSLSRDSQGHGRDLSAGIGLLAAATQSLNMPASLGRMNQGTARLASLMNLGMSSSLNQQGSHSALSSGSTSSHNLQSIFNIGSRGPLPLSSQHRGDADQATNILASFGLSARDLDELSRYPEDKITPENLPQILLQLKRRRAEEGYGRDGRSSTREPPYRVPRDDWEEKRHFRRDSFDDRGPSLNPVVDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDESFYGETSHNYHKFDSEYDRMGRGPGPERSLFEKKRGAPPNSNIEDFHGFLPKGYPHLCSICDMPVHSNKEWNHHINGATHSRRCQLLLEIYPEWNPDSDSGHGMGDPFMLQQSTNPAPGILGPPPPPFHLGGPPVGPRGAGNGNMQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQLLQLVEPFGIITNHLILNKINEAFIEMSTTEDAQAAVEYYSTTPALVFGKPVRVHLSQKYKRIKKPEGKPDQKTEPPKPELGRVIHLSNLPHSGYSDNAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDALAMVEHCANKALWFQGRCVKVDLSEKYKKLVLRIPNKGVELLKKDKTRKRTYSPDSKDSPSDKKSKTEPAQKPESGNTEEKAKEEKQEDAAEPSSAKSGEQTEQDEPSLLLESEDELLVDEEEAAALLESGSSAGEDADVANLADVATEEKKDTPDDATVKTEGNVAATPAAKKKLKKRYVGGFPRSMEGFVTLDEVGDEEDSDHQKLRKSGLAAKAAGKSEDSLAEIKVDKIEEPEQESETLENGTKSEENAKAESVEASDATTAAQDTEKNAQENTDPQGEQETKSALEKPLVPDEFRIGPYQPNIPVENSG
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: join(1348143..1349033,1353304..1353365,1353924..1353965,1354217..1354320,1355450..1355502,1355978..1356103,1356702..1356827,1357014..1357184,1358415..1358546,1359562..1359605,1360073..1360463,1362033..1362429,1364616..1364629)
location: region:1348143-1364629:1
so has part: feature:1348143-1349033:1:exon
so has part: feature:1353304-1353365:1:exon
so has part: feature:1353924-1353965:1:exon
so has part: feature:1354217-1354320:1:exon
so has part: feature:1355450-1355502:1:exon
so has part: feature:1355978-1356103:1:exon
so has part: feature:1356702-1356827:1:exon
so has part: feature:1357014-1357184:1:exon
so has part: feature:1358415-1358546:1:exon
so has part: feature:1359562-1359605:1:exon
so has part: feature:1360073-1360463:1:exon
so has part: feature:1362033-1362429:1:exon
so has part: feature:1364616-1364629:1:exon

XP_021398775.1
type: Protein
SIO_000068: ncbiprotein

position:1364629:1
position: 1364629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1348143-1349033:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1353304-1353365:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1353924-1353965:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1354217-1354320:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1355450-1355502:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1355978-1356103:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1356702-1356827:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1357014-1357184:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1358415-1358546:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1359562-1359605:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1360073-1360463:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1362033-1362429:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1364616-1364629:1:exon

PAIP2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: PAIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1368131..1376465
location: region:1368131-1376465:1
so has part: feature:1368131-1376465:1:exon
subclass of: SO_0000010

110477373
type: Gene
SIO_000068: ncbigene

position:1368131:1
position: 1368131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1376465:1
position: 1376465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1368131-1376465:1:exon

PAIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PAIP2
product: poly(A) binding protein interacting protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 49 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_021543105.2
SIO_010081: PAIP2
subclass of: SO_0000673
so part of: PAIP2
location: join(1368131..1368270,1371622..1371781,1373968..1374147,1375356..1376465)
location: region:1368131-1376465:1
so has part: feature:1368131-1368270:1:exon
so has part: feature:1371622-1371781:1:exon
so has part: feature:1373968-1374147:1:exon
so has part: feature:1375356-1376465:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1368131-1368270:1:exon

position:1368270:1
position: 1368270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1371622-1371781:1:exon

position:1371622:1
position: 1371622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1371781:1
position: 1371781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1373968-1374147:1:exon

position:1373968:1
position: 1373968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1374147:1
position: 1374147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1375356-1376465:1:exon

position:1375356:1
position: 1375356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PAIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PAIP2
product: poly(A) binding protein interacting protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 62 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_021543103.2
SIO_010081: PAIP2
subclass of: SO_0000673
so part of: PAIP2
location: join(1368133..1368270,1371616..1371781,1373968..1374147,1375356..1376465)
location: region:1368133-1376465:1
so has part: feature:1368133-1368270:1:exon
so has part: feature:1371616-1371781:1:exon
so has part: feature:1373968-1374147:1:exon
so has part: feature:1375356-1376465:1:exon

position:1368133:1
position: 1368133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1368133-1368270:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1371616-1371781:1:exon

position:1371616:1
position: 1371616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1373968-1374147:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1375356-1376465:1:exon

PAIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PAIP2
product: poly(A) binding protein interacting protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 51 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021543104.2
SIO_010081: PAIP2
subclass of: SO_0000673
so part of: PAIP2
location: join(1368572..1368637,1371616..1371781,1373968..1374147,1375356..1376465)
location: region:1368572-1376465:1
so has part: feature:1368572-1368637:1:exon
so has part: feature:1371616-1371781:1:exon
so has part: feature:1373968-1374147:1:exon
so has part: feature:1375356-1376465:1:exon

position:1368572:1
position: 1368572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1368572-1368637:1:exon

position:1368637:1
position: 1368637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1371616-1371781:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1373968-1374147:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1375356-1376465:1:exon

PAIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PAIP2
product: poly(A) binding protein interacting protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 51 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021543102.2
SIO_010081: PAIP2
subclass of: SO_0000673
so part of: PAIP2
location: join(1369691..1369715,1371616..1371781,1373968..1374147,1375356..1376465)
location: region:1369691-1376465:1
so has part: feature:1369691-1369715:1:exon
so has part: feature:1371616-1371781:1:exon
so has part: feature:1373968-1374147:1:exon
so has part: feature:1375356-1376465:1:exon

position:1369691:1
position: 1369691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1369691-1369715:1:exon

position:1369715:1
position: 1369715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1371616-1371781:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1373968-1374147:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1375356-1376465:1:exon

PAIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PAIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyadenylate-binding protein-interacting protein 2 isoform X1
translation: MSTETCCRFGIGVAAMKDPSRSSTSPSIISEDVIINGHSHEDDNPFAEYMWMENEEEFNRQIEEELWEEEFIERCFQEMLEEEEEHEWFIPARDLPQTMDQIQDQFNDLVISDSSSLEDLVVKSNLNPNAKEFVPGVKYLNI
SIO_010081: PAIP2
subclass of: SO_0000673
so part of: PAIP2
location: join(1369699..1369715,1371616..1371781,1373968..1374147,1375356..1375421)
location: region:1369699-1375421:1
so has part: feature:1369699-1369715:1:exon
so has part: feature:1371616-1371781:1:exon
so has part: feature:1373968-1374147:1:exon
so has part: feature:1375356-1375421:1:exon

XP_021398777.1
type: Protein
SIO_000068: ncbiprotein

position:1369699:1
position: 1369699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1375421:1
position: 1375421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1369699-1369715:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1371616-1371781:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1373968-1374147:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1375356-1375421:1:exon

PAIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PAIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyadenylate-binding protein-interacting protein 2 isoform X2
translation: MKDPSRSSTSPSIISEDVIINGHSHEDDNPFAEYMWMENEEEFNRQIEEELWEEEFIERCFQEMLEEEEEHEWFIPARDLPQTMDQIQDQFNDLVISDSSSLEDLVVKSNLNPNAKEFVPGVKYLNI
SIO_010081: PAIP2
subclass of: SO_0000673
so part of: PAIP2
location: join(1371644..1371781,1373968..1374147,1375356..1375421)
location: region:1371644-1375421:1
so has part: feature:1371644-1371781:1:exon
so has part: feature:1373968-1374147:1:exon
so has part: feature:1375356-1375421:1:exon

XP_021398778.1
type: Protein
SIO_000068: ncbiprotein

position:1371644:1
position: 1371644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1371644-1371781:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1373968-1374147:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1375356-1375421:1:exon

PAIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PAIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyadenylate-binding protein-interacting protein 2 isoform X2
translation: MKDPSRSSTSPSIISEDVIINGHSHEDDNPFAEYMWMENEEEFNRQIEEELWEEEFIERCFQEMLEEEEEHEWFIPARDLPQTMDQIQDQFNDLVISDSSSLEDLVVKSNLNPNAKEFVPGVKYLNI
SIO_010081: PAIP2
subclass of: SO_0000673
so part of: PAIP2
location: join(1371644..1371781,1373968..1374147,1375356..1375421)
location: region:1371644-1375421:1
so has part: feature:1371644-1371781:1:exon
so has part: feature:1373968-1374147:1:exon
so has part: feature:1375356-1375421:1:exon

XP_021398779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1371644-1371781:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1373968-1374147:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1375356-1375421:1:exon

PAIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PAIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyadenylate-binding protein-interacting protein 2 isoform X2
translation: MKDPSRSSTSPSIISEDVIINGHSHEDDNPFAEYMWMENEEEFNRQIEEELWEEEFIERCFQEMLEEEEEHEWFIPARDLPQTMDQIQDQFNDLVISDSSSLEDLVVKSNLNPNAKEFVPGVKYLNI
SIO_010081: PAIP2
subclass of: SO_0000673
so part of: PAIP2
location: join(1371644..1371781,1373968..1374147,1375356..1375421)
location: region:1371644-1375421:1
so has part: feature:1371644-1371781:1:exon
so has part: feature:1373968-1374147:1:exon
so has part: feature:1375356-1375421:1:exon

XP_021398780.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1371644-1371781:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1373968-1374147:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1375356-1375421:1:exon

SLC23A1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SLC23A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1378792..1383222)
location: region:1378792-1383222:-1
so has part: feature:1378792-1383222:-1:exon
subclass of: SO_0000010

110477380
type: Gene
SIO_000068: ncbigene

position:1378792:-1
position: 1378792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1383222:-1
position: 1383222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1378792-1383222:-1:exon

SLC23A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SLC23A1
product: solute carrier family 23 member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 14 Proteins, and 68% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021543114.1
SIO_010081: SLC23A1
subclass of: SO_0000673
so part of: SLC23A1
location: complement(join(1378792..1379089,1379205..1379300,1379442..1379585,1379764..1379893,1379967..1380072,1380192..1380339,1380509..1380665,1380769..1380889,1381460..1381641,1381779..1381846,1381923..1382011,1382083..1382240,1382330..1382431,1383168..1383222))
location: region:1378792-1383222:-1
so has part: feature:1383168-1383222:-1:exon
so has part: feature:1382330-1382431:-1:exon
so has part: feature:1382083-1382240:-1:exon
so has part: feature:1381923-1382011:-1:exon
so has part: feature:1381779-1381846:-1:exon
so has part: feature:1381460-1381641:-1:exon
so has part: feature:1380769-1380889:-1:exon
so has part: feature:1380509-1380665:-1:exon
so has part: feature:1380192-1380339:-1:exon
so has part: feature:1379967-1380072:-1:exon
so has part: feature:1379764-1379893:-1:exon
so has part: feature:1379442-1379585:-1:exon
so has part: feature:1379205-1379300:-1:exon
so has part: feature:1378792-1379089:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1383168-1383222:-1:exon

position:1383168:-1
position: 1383168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1382330-1382431:-1:exon

position:1382330:-1
position: 1382330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1382431:-1
position: 1382431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1382083-1382240:-1:exon

position:1382083:-1
position: 1382083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1382240:-1
position: 1382240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1381923-1382011:-1:exon

position:1381923:-1
position: 1381923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1382011:-1
position: 1382011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1381779-1381846:-1:exon

position:1381779:-1
position: 1381779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1381846:-1
position: 1381846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1381460-1381641:-1:exon

position:1381460:-1
position: 1381460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1381641:-1
position: 1381641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1380769-1380889:-1:exon

position:1380769:-1
position: 1380769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1380889:-1
position: 1380889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1380509-1380665:-1:exon

position:1380509:-1
position: 1380509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1380665:-1
position: 1380665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1380192-1380339:-1:exon

position:1380192:-1
position: 1380192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1380339:-1
position: 1380339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1379967-1380072:-1:exon

position:1379967:-1
position: 1379967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1380072:-1
position: 1380072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1379764-1379893:-1:exon

position:1379764:-1
position: 1379764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1379893:-1
position: 1379893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1379442-1379585:-1:exon

position:1379442:-1
position: 1379442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1379585:-1
position: 1379585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1379205-1379300:-1:exon

position:1379205:-1
position: 1379205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1379300:-1
position: 1379300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1378792-1379089:-1:exon

position:1379089:-1
position: 1379089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC23A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SLC23A1
product: solute carrier family 23 member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 15 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031506007.1
SIO_010081: SLC23A1
subclass of: SO_0000673
so part of: SLC23A1
location: complement(join(1378792..1379089,1379205..1379300,1379442..1379585,1379764..1379893,1379967..1380072,1380192..1380339,1380509..1380665,1380769..1380889,1381460..1381641,1381779..1381846,1381923..1382011,1382083..1382240,1382330..1382448,1382618..1382693,1383168..1383203))
location: region:1378792-1383203:-1
so has part: feature:1383168-1383203:-1:exon
so has part: feature:1382618-1382693:-1:exon
so has part: feature:1382330-1382448:-1:exon
so has part: feature:1382083-1382240:-1:exon
so has part: feature:1381923-1382011:-1:exon
so has part: feature:1381779-1381846:-1:exon
so has part: feature:1381460-1381641:-1:exon
so has part: feature:1380769-1380889:-1:exon
so has part: feature:1380509-1380665:-1:exon
so has part: feature:1380192-1380339:-1:exon
so has part: feature:1379967-1380072:-1:exon
so has part: feature:1379764-1379893:-1:exon
so has part: feature:1379442-1379585:-1:exon
so has part: feature:1379205-1379300:-1:exon
so has part: feature:1378792-1379089:-1:exon

position:1383203:-1
position: 1383203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1383168-1383203:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1382618-1382693:-1:exon

position:1382618:-1
position: 1382618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1382693:-1
position: 1382693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1382330-1382448:-1:exon

position:1382448:-1
position: 1382448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1382083-1382240:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1381923-1382011:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1381779-1381846:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1381460-1381641:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1380769-1380889:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1380509-1380665:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1380192-1380339:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1379967-1380072:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1379764-1379893:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1379442-1379585:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1379205-1379300:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1378792-1379089:-1:exon

SLC23A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SLC23A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 23 member 1 isoform X2
translation: MGTRSGDLAQPQDPGTGTRPPRPEVDMLYRIEDVPPWYLCILLGFQHYLTCFSGTIAVPFLLAESLCVGKDQLTVSYLIGTIFTCVGITTLIQTTVGIRLPLFQASALAFLVPAKSILALEKWRCPPEEQIYGNWSLPLNTSHIWQPRMREIQGAIIVSSLVEVVIGLLGLPGALLSYIGPLTVTPTVSLIGLSVFQAAGDRAGSHWGISVLTIFLIVLFAQYLRQVAICLPGYRRGHGFVLLRIQIFKMFPIILAIMLVWLTCYVLTRTGVFPSRPEEYGYKARTDARGEILSVAPWFRVPYPCQWGLPTVTSAAVLGMFSATLAGIIESIGDYYSCARLAGAPPPPVHAINRGIFTEGISCIIAGLLGTGNGSTSSSPNIGVLGITKVGSRRVIQYGAGIMLLLGTIGKFTALFASLPDPVLGGMFCTLFGMITAVGLSNLQFVDMNSSRNLFVLGFAMFFGLTLPNYLDSHPGAINTGVPELDQILTVLLTTEMFVGGTIAFVLDNTIPGTQEERGLVQWKAGAHSDSASSASLRSYDFPFGMGAVRRSRWLRSVPVCPVFTGFRARPRGSGKAAAEGPDGADGGSVCTKV
SIO_010081: SLC23A1
subclass of: SO_0000673
so part of: SLC23A1
location: complement(join(1378842..1379089,1379205..1379300,1379442..1379585,1379764..1379893,1379967..1380072,1380192..1380339,1380509..1380665,1380769..1380889,1381460..1381641,1381779..1381846,1381923..1382011,1382083..1382240,1382330..1382431,1383168..1383203))
location: region:1378842-1383203:-1
so has part: feature:1383168-1383203:-1:exon
so has part: feature:1382330-1382431:-1:exon
so has part: feature:1382083-1382240:-1:exon
so has part: feature:1381923-1382011:-1:exon
so has part: feature:1381779-1381846:-1:exon
so has part: feature:1381460-1381641:-1:exon
so has part: feature:1380769-1380889:-1:exon
so has part: feature:1380509-1380665:-1:exon
so has part: feature:1380192-1380339:-1:exon
so has part: feature:1379967-1380072:-1:exon
so has part: feature:1379764-1379893:-1:exon
so has part: feature:1379442-1379585:-1:exon
so has part: feature:1379205-1379300:-1:exon
so has part: feature:1378842-1379089:-1:exon

XP_021398789.1
type: Protein
SIO_000068: ncbiprotein

position:1378842:-1
position: 1378842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1383168-1383203:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1382330-1382431:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1382083-1382240:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1381923-1382011:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1381779-1381846:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1381460-1381641:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1380769-1380889:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1380509-1380665:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1380192-1380339:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1379967-1380072:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1379764-1379893:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1379442-1379585:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1379205-1379300:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1378842-1379089:-1:exon

SLC23A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SLC23A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 23 member 1 isoform X1
translation: MGTRSGDLAQPQNGNLALAPAGSLHTPGKELPAAGRVTVSPRQDPGTGTRPPRPEVDMLYRIEDVPPWYLCILLGFQHYLTCFSGTIAVPFLLAESLCVGKDQLTVSYLIGTIFTCVGITTLIQTTVGIRLPLFQASALAFLVPAKSILALEKWRCPPEEQIYGNWSLPLNTSHIWQPRMREIQGAIIVSSLVEVVIGLLGLPGALLSYIGPLTVTPTVSLIGLSVFQAAGDRAGSHWGISVLTIFLIVLFAQYLRQVAICLPGYRRGHGFVLLRIQIFKMFPIILAIMLVWLTCYVLTRTGVFPSRPEEYGYKARTDARGEILSVAPWFRVPYPCQWGLPTVTSAAVLGMFSATLAGIIESIGDYYSCARLAGAPPPPVHAINRGIFTEGISCIIAGLLGTGNGSTSSSPNIGVLGITKVGSRRVIQYGAGIMLLLGTIGKFTALFASLPDPVLGGMFCTLFGMITAVGLSNLQFVDMNSSRNLFVLGFAMFFGLTLPNYLDSHPGAINTGVPELDQILTVLLTTEMFVGGTIAFVLDNTIPGTQEERGLVQWKAGAHSDSASSASLRSYDFPFGMGAVRRSRWLRSVPVCPVFTGFRARPRGSGKAAAEGPDGADGGSVCTKV
SIO_010081: SLC23A1
subclass of: SO_0000673
so part of: SLC23A1
location: complement(join(1378842..1379089,1379205..1379300,1379442..1379585,1379764..1379893,1379967..1380072,1380192..1380339,1380509..1380665,1380769..1380889,1381460..1381641,1381779..1381846,1381923..1382011,1382083..1382240,1382330..1382448,1382618..1382693,1383168..1383203))
location: region:1378842-1383203:-1
so has part: feature:1383168-1383203:-1:exon
so has part: feature:1382618-1382693:-1:exon
so has part: feature:1382330-1382448:-1:exon
so has part: feature:1382083-1382240:-1:exon
so has part: feature:1381923-1382011:-1:exon
so has part: feature:1381779-1381846:-1:exon
so has part: feature:1381460-1381641:-1:exon
so has part: feature:1380769-1380889:-1:exon
so has part: feature:1380509-1380665:-1:exon
so has part: feature:1380192-1380339:-1:exon
so has part: feature:1379967-1380072:-1:exon
so has part: feature:1379764-1379893:-1:exon
so has part: feature:1379442-1379585:-1:exon
so has part: feature:1379205-1379300:-1:exon
so has part: feature:1378842-1379089:-1:exon

XP_031361867.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1383168-1383203:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1382618-1382693:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1382330-1382448:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1382083-1382240:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1381923-1382011:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1381779-1381846:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1381460-1381641:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1380769-1380889:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1380509-1380665:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1380192-1380339:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1379967-1380072:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1379764-1379893:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1379442-1379585:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1379205-1379300:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1378842-1379089:-1:exon

MZB1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: MZB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1383351..1384775)
location: region:1383351-1384775:-1
so has part: feature:1383351-1384775:-1:exon
subclass of: SO_0000010

110477381
type: Gene
SIO_000068: ncbigene

position:1383351:-1
position: 1383351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1384775:-1
position: 1384775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1383351-1384775:-1:exon

MZB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: MZB1
product: marginal zone B and B1 cell specific protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 1 EST, 8 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021543115.1
SIO_010081: MZB1
subclass of: SO_0000673
so part of: MZB1
location: complement(join(1383351..1383796,1383873..1383977,1384148..1384254,1384527..1384775))
location: region:1383351-1384775:-1
so has part: feature:1384527-1384775:-1:exon
so has part: feature:1384148-1384254:-1:exon
so has part: feature:1383873-1383977:-1:exon
so has part: feature:1383351-1383796:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1384527-1384775:-1:exon

position:1384527:-1
position: 1384527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1384148-1384254:-1:exon

position:1384148:-1
position: 1384148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1384254:-1
position: 1384254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1383873-1383977:-1:exon

position:1383873:-1
position: 1383873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1383977:-1
position: 1383977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1383351-1383796:-1:exon

position:1383796:-1
position: 1383796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MZB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: MZB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: marginal zone B- and B1-cell-specific protein
translation: MRAALAAWLVLSLLGGTGAEDTCGDPPAAPSRSIPAPQLSPEERLSPHMPESLRCDACHAIAFQIEEQLRKAEGKVGKKALKESDYIEVLERSCSQDWESYGVLELDGEKRLSGPGLRTQQPLSVLVSGGPWPGRLSKLCHGYVGERGEALIYGAHRRGPAALRQLLCHGDKGPCAGRKERPEPRKALQNEL
SIO_010081: MZB1
subclass of: SO_0000673
so part of: MZB1
location: complement(join(1383622..1383796,1383873..1383977,1384148..1384254,1384527..1384718))
location: region:1383622-1384718:-1
so has part: feature:1384527-1384718:-1:exon
so has part: feature:1384148-1384254:-1:exon
so has part: feature:1383873-1383977:-1:exon
so has part: feature:1383622-1383796:-1:exon

XP_021398790.1
type: Protein
SIO_000068: ncbiprotein

position:1383622:-1
position: 1383622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1384718:-1
position: 1384718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1384527-1384718:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1384148-1384254:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1383873-1383977:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1383622-1383796:-1:exon

DNAJC18
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: DNAJC18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1394527..1409616)
location: region:1394527-1409616:-1
so has part: feature:1394527-1409616:-1:exon
subclass of: SO_0000010

110477374
type: Gene
SIO_000068: ncbigene

position:1394527:-1
position: 1394527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1409616:-1
position: 1409616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1394527-1409616:-1:exon

DNAJC18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: DNAJC18
product: DnaJ heat shock protein family (Hsp40) member C18
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 39 ESTs, 12 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021543107.2
SIO_010081: DNAJC18
subclass of: SO_0000673
so part of: DNAJC18
location: complement(join(1394527..1396957,1400443..1400615,1402266..1402375,1404241..1404353,1407717..1407902,1409185..1409330,1409447..1409616))
location: region:1394527-1409616:-1
so has part: feature:1409447-1409616:-1:exon
so has part: feature:1409185-1409330:-1:exon
so has part: feature:1407717-1407902:-1:exon
so has part: feature:1404241-1404353:-1:exon
so has part: feature:1402266-1402375:-1:exon
so has part: feature:1400443-1400615:-1:exon
so has part: feature:1394527-1396957:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1409447-1409616:-1:exon

position:1409447:-1
position: 1409447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1409185-1409330:-1:exon

position:1409185:-1
position: 1409185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1409330:-1
position: 1409330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1407717-1407902:-1:exon

position:1407717:-1
position: 1407717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1407902:-1
position: 1407902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1404241-1404353:-1:exon

position:1404241:-1
position: 1404241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1404353:-1
position: 1404353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1402266-1402375:-1:exon

position:1402266:-1
position: 1402266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1402375:-1
position: 1402375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1400443-1400615:-1:exon

position:1400443:-1
position: 1400443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1400615:-1
position: 1400615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1394527-1396957:-1:exon

position:1396957:-1
position: 1396957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DNAJC18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: DNAJC18
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: dnaJ homolog subfamily C member 18
translation: MTSPPFAVTSRPAAPRARSQQPPRTRWRRGAAGGERGRRRPRXDMTYTAEQLHGVQRIKRCRDYYEILGVSRDAGEEELKRAYRRLALKFHPDKNRAPGATEAFKAIGNAFAVLSNPEKRLRYDELGSDHEHVSTGQARHYNYYTEFEADITPEEIFNVFFGGHFPTGNIHMFSNVARDAHYYPRRHRAERAWTQEPEEEEHRPQNSYSAFIQLMPVFIIIIVSVITQLMATNPPYSLFYKSSIGHVVSRETENLQVPYYVDKNFEKNYQGAELQELEKTVEKDYIDYIQTSCWKEKQQKSDLSNLAKLYRDERLKQKAESLKLEHCEKLSSLIGMHKGG
SIO_010081: DNAJC18
subclass of: SO_0000673
so part of: DNAJC18
location: complement(join(1396833..1396957,1400443..1400615,1402266..1402375,1404241..1404353,1407717..1407902,1409185..1409330,1409447..1409616))
location: region:1396833-1409616:-1
so has part: feature:1409447-1409616:-1:exon
so has part: feature:1409185-1409330:-1:exon
so has part: feature:1407717-1407902:-1:exon
so has part: feature:1404241-1404353:-1:exon
so has part: feature:1402266-1402375:-1:exon
so has part: feature:1400443-1400615:-1:exon
so has part: feature:1396833-1396957:-1:exon

XP_021398782.2
type: Protein
SIO_000068: ncbiprotein

position:1396833:-1
position: 1396833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1409447-1409616:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1409185-1409330:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1407717-1407902:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1404241-1404353:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1402266-1402375:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1400443-1400615:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1396833-1396957:-1:exon

ECSCR
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: ECSCR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1411330..1430424)
location: region:1411330-1430424:-1
so has part: feature:1411330-1430424:-1:exon
subclass of: SO_0000010

110477382
type: Gene
SIO_000068: ncbigene

position:1411330:-1
position: 1411330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1430424:-1
position: 1430424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1411330-1430424:-1:exon

ECSCR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ECSCR
product: endothelial cell surface expressed chemotaxis and apoptosis regulator, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021543116.1
SIO_010081: ECSCR
subclass of: SO_0000673
so part of: ECSCR
location: complement(join(1411330..1411964,1412487..1412586,1413697..1413733,1414272..1414370,1415107..1415205,1415690..1415758,1417602..1417652,1418110..1418226,1419587..1419637,1420473..1420514,1430277..1430424))
location: region:1411330-1430424:-1
so has part: feature:1430277-1430424:-1:exon
so has part: feature:1420473-1420514:-1:exon
so has part: feature:1419587-1419637:-1:exon
so has part: feature:1418110-1418226:-1:exon
so has part: feature:1417602-1417652:-1:exon
so has part: feature:1415690-1415758:-1:exon
so has part: feature:1415107-1415205:-1:exon
so has part: feature:1414272-1414370:-1:exon
so has part: feature:1413697-1413733:-1:exon
so has part: feature:1412487-1412586:-1:exon
so has part: feature:1411330-1411964:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1430277-1430424:-1:exon

position:1430277:-1
position: 1430277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1420473-1420514:-1:exon

position:1420473:-1
position: 1420473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1420514:-1
position: 1420514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1419587-1419637:-1:exon

position:1419587:-1
position: 1419587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1419637:-1
position: 1419637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1418110-1418226:-1:exon

position:1418110:-1
position: 1418110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1418226:-1
position: 1418226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1417602-1417652:-1:exon

position:1417602:-1
position: 1417602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1417652:-1
position: 1417652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1415690-1415758:-1:exon

position:1415690:-1
position: 1415690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1415758:-1
position: 1415758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1415107-1415205:-1:exon

position:1415107:-1
position: 1415107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1415205:-1
position: 1415205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1414272-1414370:-1:exon

position:1414272:-1
position: 1414272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1414370:-1
position: 1414370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1413697-1413733:-1:exon

position:1413697:-1
position: 1413697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1413733:-1
position: 1413733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1412487-1412586:-1:exon

position:1412487:-1
position: 1412487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1412586:-1
position: 1412586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1411330-1411964:-1:exon

position:1411964:-1
position: 1411964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ECSCR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ECSCR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endothelial cell-specific chemotaxis regulator isoform X2
translation: MLLPALAPLLGLLLLLPGELLPGSTTSTNSSTPAGTGPSQPTAPSPEAKNHSSEPSVKPTPLTNLSLTSVGQTTTVKPSPTTTRNLTAATERDEKSSGNRSTAAPPTPRGQDPMRNESTTASATQGASSSQRGASEPITPTPNSSSQLPEPTPTDEKSPLTVAAFGVISFVVILIVVVIILVSVVSLRFKCNHSKDSEDKQKPGTSMVSESCSADTSQKGNSITLISMKNINTNNSMNYPPSEKVL
SIO_010081: ECSCR
subclass of: SO_0000673
so part of: ECSCR
location: complement(join(1411956..1411964,1412487..1412586,1413697..1413733,1414272..1414370,1415107..1415205,1415690..1415758,1417602..1417652,1418110..1418226,1419587..1419637,1420473..1420514,1430277..1430343))
location: region:1411956-1430343:-1
so has part: feature:1430277-1430343:-1:exon
so has part: feature:1420473-1420514:-1:exon
so has part: feature:1419587-1419637:-1:exon
so has part: feature:1418110-1418226:-1:exon
so has part: feature:1417602-1417652:-1:exon
so has part: feature:1415690-1415758:-1:exon
so has part: feature:1415107-1415205:-1:exon
so has part: feature:1414272-1414370:-1:exon
so has part: feature:1413697-1413733:-1:exon
so has part: feature:1412487-1412586:-1:exon
so has part: feature:1411956-1411964:-1:exon

XP_021398791.1
type: Protein
SIO_000068: ncbiprotein

position:1411956:-1
position: 1411956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1430343:-1
position: 1430343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1430277-1430343:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1420473-1420514:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1419587-1419637:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1418110-1418226:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1417602-1417652:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1415690-1415758:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1415107-1415205:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1414272-1414370:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1413697-1413733:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1412487-1412586:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1411956-1411964:-1:exon

ECSCR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ECSCR
product: endothelial cell surface expressed chemotaxis and apoptosis regulator, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031506014.1
SIO_010081: ECSCR
subclass of: SO_0000673
so part of: ECSCR
location: complement(join(1412460..1412586,1413697..1413733,1414272..1414370,1415107..1415205,1415690..1415758,1417602..1417652,1418110..1418226,1419587..1419637,1420473..1420514,1430292..1430424))
location: region:1412460-1430424:-1
so has part: feature:1430292-1430424:-1:exon
so has part: feature:1420473-1420514:-1:exon
so has part: feature:1419587-1419637:-1:exon
so has part: feature:1418110-1418226:-1:exon
so has part: feature:1417602-1417652:-1:exon
so has part: feature:1415690-1415758:-1:exon
so has part: feature:1415107-1415205:-1:exon
so has part: feature:1414272-1414370:-1:exon
so has part: feature:1413697-1413733:-1:exon
so has part: feature:1412460-1412586:-1:exon

position:1412460:-1
position: 1412460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1430292-1430424:-1:exon

position:1430292:-1
position: 1430292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1420473-1420514:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1419587-1419637:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1418110-1418226:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1417602-1417652:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1415690-1415758:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1415107-1415205:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1414272-1414370:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1413697-1413733:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1412460-1412586:-1:exon

ECSCR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ECSCR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endothelial cell-specific chemotaxis regulator isoform X1
translation: MLLPALAPLLGLLLLLPGSTTSTNSSTPAGTGPSQPTAPSPEAKNHSSEPSVKPTPLTNLSLTSVGQTTTVKPSPTTTRNLTAATERDEKSSGNRSTAAPPTPRGQDPMRNESTTASATQGASSSQRGASEPITPTPNSSSQLPEPTPTDEKSPLTVAAFGVISFVVILIVVVIILVSVVSLRFKCNHSKDSEDKQKPGTSMVSESCSADTSQKGNSITLISMKNINTNNSMNYPPSEKVSLFSLAF
SIO_010081: ECSCR
subclass of: SO_0000673
so part of: ECSCR
location: complement(join(1412460..1412586,1413697..1413733,1414272..1414370,1415107..1415205,1415690..1415758,1417602..1417652,1418110..1418226,1419587..1419637,1420473..1420514,1430292..1430343))
location: region:1412460-1430343:-1
so has part: feature:1430292-1430343:-1:exon
so has part: feature:1420473-1420514:-1:exon
so has part: feature:1419587-1419637:-1:exon
so has part: feature:1418110-1418226:-1:exon
so has part: feature:1417602-1417652:-1:exon
so has part: feature:1415690-1415758:-1:exon
so has part: feature:1415107-1415205:-1:exon
so has part: feature:1414272-1414370:-1:exon
so has part: feature:1413697-1413733:-1:exon
so has part: feature:1412460-1412586:-1:exon

XP_031361874.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1430292-1430343:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1420473-1420514:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1419587-1419637:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1418110-1418226:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1417602-1417652:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1415690-1415758:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1415107-1415205:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1414272-1414370:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1413697-1413733:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1412460-1412586:-1:exon

SMIM33
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SMIM33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1433056..1433439
location: region:1433056-1433439:1
so has part: feature:1433056-1433439:1:exon
subclass of: SO_0000010

116184114
type: Gene
SIO_000068: ncbigene

position:1433056:1
position: 1433056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1433439:1
position: 1433439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1433056-1433439:1:exon

SMIM33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SMIM33
product: small integral membrane protein 33
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_031505999.1
SIO_010081: SMIM33
subclass of: SO_0000673
so part of: SMIM33
location: 1433056..1433439
location: region:1433056-1433439:1
so has part: feature:1433056-1433439:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1433056-1433439:1:exon

SMIM33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SMIM33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small integral membrane protein 33
translation: MNASVPGSQLRQAEPQDVAAFTPVSIVKSVTKKSDALPVISVIVVLFVLLAVCIVLAVHYGPQLRTVQLTLQHGPPAQHPDSVLLTDWRPLDTHSKMDSAAVTCHCSCNHHLPHGSAEPNVIEITYL
SIO_010081: SMIM33
subclass of: SO_0000673
so part of: SMIM33
location: 1433056..1433439
location: region:1433056-1433439:1
so has part: feature:1433056-1433439:1:exon

XP_031361859.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1433056-1433439:1:exon

PCDH12
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: PCDH12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1440573..1450520
location: region:1440573-1450520:1
so has part: feature:1440573-1450520:1:exon
subclass of: SO_0000010

110477371
type: Gene
SIO_000068: ncbigene

position:1440573:1
position: 1440573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1450520:1
position: 1450520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1440573-1450520:1:exon

PCDH12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PCDH12
product: protocadherin 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021543096.2
SIO_010081: PCDH12
subclass of: SO_0000673
so part of: PCDH12
location: join(1440573..1443476,1443878..1443972,1445081..1445268,1449944..1450520)
location: region:1440573-1450520:1
so has part: feature:1440573-1443476:1:exon
so has part: feature:1443878-1443972:1:exon
so has part: feature:1445081-1445268:1:exon
so has part: feature:1449944-1450520:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1440573-1443476:1:exon

position:1443476:1
position: 1443476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1443878-1443972:1:exon

position:1443878:1
position: 1443878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1443972:1
position: 1443972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1445081-1445268:1:exon

position:1445081:1
position: 1445081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1445268:1
position: 1445268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1449944-1450520:1:exon

position:1449944:1
position: 1449944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCDH12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PCDH12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-12
translation: MPRRCGGAEDSAGMRWAAGQPMAARRGRGGSAGSVLGLSRSALRLPALWWWYLFLSADAQEVATFTVQYRVLEEVPPGTVIGSLAEHFEGGESGEAAETFQLMETPGRFPLHVGSGDGVLSTAGRVDREQLCRHSDPCWVSFNVLAAQNPALIHLEVQVMDVNDNAPQFPTPELELEISESASLRTRIPLDRALDADTGPNALCSYALSPSEHFALEVVPSSDGTRHAELVVVKEVDRELHSSFDLVLTATDHGEPPKSGTALIKVIVLDSNDNSPVFADSSLMVEVREDAQPGTLLVTVTATDPDQGPNGEIEYSLSRHAPPEVLSTFSIDARTGSILLRLPLDYEDTHTYELDVQARDLGANPIPAHCKVLVRVLDVNDNAPDVHVTWAAREPVLSEALPKDSFVALVTASDPDSGTNRQVLCSLSQGYEHFRLKRTNSHSFALLTNASLDRERRAEYNLTLVVRDMGDLSLAVLKHLTICISDVNDNAPAFEKAVYEAAVDENSEAPSFLLTVRATDPDLGSNGKVTYRILDPSVLGLVSVDPITGDIFALQAFDYEQLRSLEFLVTAEDGGHPKLASNISIRLAVLDRNDNAPIITMPVLVGGVATLSVLVNVDTGCCWVVPGNGSTQGAAAVTNATLISCPANPFLFRIMARDVDSGINGALRYDLVGGDDAGLFILDPLLGQVSLNASNASSLAGSQRELLVRVSDQGDTPLHTLARLRLLFRRHGAFSKMSAQDPGWPGLPVVLLICLAALLGGCVPLLALTLSLRKKDKKDGMAYNCREAEDARRQQQLKKPHRQIQKADIHLVPLLRGRPRDPEPPRACLEEQPGTGSPAAGGSPRASLHLTPTLYRTLRNQRTQKGSEEQQGTFELPVLQRRPCQPHRLKPPGKEAVGPPEAALHGQSWAKPPVGEPRVPAEQPGAAGAAGQPQPHQQILRSLVRLSLVALAEQSPTGEFAMESPPVQQISQLLSLLHQGQFQPKTNYRGNKYTAKNGSRAAGLDTGLDTGLDTGLDTDCLSTKDSGHGESEAGDRDSDSAFELSVQQLVGEELETLLEPQAELALKRLTAADPAWVARLSLPLTSSYKDNVFCPDSPCSPEDEEAARQEKPRTFETFGKGAAADPGGSGTRLASTFLSEMSTLFEMILSQKVQAHGEAGAGLLRQLSARGHSLGLGDAAPGL
SIO_010081: PCDH12
subclass of: SO_0000673
so part of: PCDH12
location: join(1440573..1443476,1443878..1443972,1445081..1445268,1449944..1450308)
location: region:1440573-1450308:1
so has part: feature:1440573-1443476:1:exon
so has part: feature:1443878-1443972:1:exon
so has part: feature:1445081-1445268:1:exon
so has part: feature:1449944-1450308:1:exon

XP_021398771.1
type: Protein
SIO_000068: ncbiprotein

position:1450308:1
position: 1450308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1440573-1443476:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1443878-1443972:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1445081-1445268:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1449944-1450308:1:exon

DELE1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: DELE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1451594..1469828)
location: region:1451594-1469828:-1
so has part: feature:1451594-1469828:-1:exon
subclass of: SO_0000010

110477376
type: Gene
SIO_000068: ncbigene

position:1451594:-1
position: 1451594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1469828:-1
position: 1469828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1451594-1469828:-1:exon

DELE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: DELE1
product: DAP3 binding cell death enhancer 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021543109.2
SIO_010081: DELE1
subclass of: SO_0000673
so part of: DELE1
location: complement(join(1451594..1453626,1454459..1454615,1457918..1458010,1458821..1458979,1459810..1459952,1460669..1460762,1462511..1462566,1468829..1468972,1469270..1469411,1469499..1469595,1469731..1469828))
location: region:1451594-1469828:-1
so has part: feature:1469731-1469828:-1:exon
so has part: feature:1469499-1469595:-1:exon
so has part: feature:1469270-1469411:-1:exon
so has part: feature:1468829-1468972:-1:exon
so has part: feature:1462511-1462566:-1:exon
so has part: feature:1460669-1460762:-1:exon
so has part: feature:1459810-1459952:-1:exon
so has part: feature:1458821-1458979:-1:exon
so has part: feature:1457918-1458010:-1:exon
so has part: feature:1454459-1454615:-1:exon
so has part: feature:1451594-1453626:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1469731-1469828:-1:exon

position:1469731:-1
position: 1469731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1469499-1469595:-1:exon

position:1469499:-1
position: 1469499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1469595:-1
position: 1469595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1469270-1469411:-1:exon

position:1469270:-1
position: 1469270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1469411:-1
position: 1469411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1468829-1468972:-1:exon

position:1468829:-1
position: 1468829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1468972:-1
position: 1468972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1462511-1462566:-1:exon

position:1462511:-1
position: 1462511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1462566:-1
position: 1462566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1460669-1460762:-1:exon

position:1460669:-1
position: 1460669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1460762:-1
position: 1460762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1459810-1459952:-1:exon

position:1459810:-1
position: 1459810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1459952:-1
position: 1459952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1458821-1458979:-1:exon

position:1458821:-1
position: 1458821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1458979:-1
position: 1458979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1457918-1458010:-1:exon

position:1457918:-1
position: 1457918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1458010:-1
position: 1458010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1454459-1454615:-1:exon

position:1454459:-1
position: 1454459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1454615:-1
position: 1454615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1451594-1453626:-1:exon

position:1453626:-1
position: 1453626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DELE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: DELE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: death ligand signal enhancer
translation: MWRLLLPGRGRCAPAPARAACAPGLGGGRSPEREPACRDGPERGGRRRALPGLVPRCSVREAVTWGAAGALLLQLLRQIAGLRSLQDARTERRLARTERRLPRRSPPPPQPAVVTEASTSCPGEQLGSQLLQKASPEAVAENSSSGIPSGLGDRQPWAEAGEFQIPVSSRVGPVLHSAKGDPAQRGHLEEAAFQLQQIFRIDISIALNILGIESMRAGHCRAAFTCFKLAADRGYSKAQFNVGLCYEHGRGTEKDLEKAGFYYCQAASSRHAMAQYRYARYLLQHGPGSLQDRQHTAVALLEQAAGAGITEAQAYLGVFYMRGLQPQEKRGLKYLLQAANSGDAQSRFHVGVCYEQGLGVQQSLAEALRHYRQSAAAGSRQARDRLWAWQQQLQDVHTKHPFPSGLRASSSSPDFWTIEPVSANVHSSQPGQCGLTLPHSWSTGTLHMMLLSSAGWSCAFRARTVPVELQGWEAQHCWQ
SIO_010081: DELE1
subclass of: SO_0000673
so part of: DELE1
location: complement(join(1453370..1453626,1454459..1454615,1457918..1458010,1458821..1458979,1459810..1459952,1460669..1460762,1462511..1462566,1468829..1468972,1469270..1469411,1469499..1469595,1469731..1469828))
location: region:1453370-1469828:-1
so has part: feature:1469731-1469828:-1:exon
so has part: feature:1469499-1469595:-1:exon
so has part: feature:1469270-1469411:-1:exon
so has part: feature:1468829-1468972:-1:exon
so has part: feature:1462511-1462566:-1:exon
so has part: feature:1460669-1460762:-1:exon
so has part: feature:1459810-1459952:-1:exon
so has part: feature:1458821-1458979:-1:exon
so has part: feature:1457918-1458010:-1:exon
so has part: feature:1454459-1454615:-1:exon
so has part: feature:1453370-1453626:-1:exon

XP_021398784.2
type: Protein
SIO_000068: ncbiprotein

position:1453370:-1
position: 1453370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1469731-1469828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1469499-1469595:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1469270-1469411:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1468829-1468972:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1462511-1462566:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1460669-1460762:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1459810-1459952:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1458821-1458979:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1457918-1458010:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1454459-1454615:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1453370-1453626:-1:exon

PCDH1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: PCDH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1806671..1883724)
location: region:1806671-1883724:-1
so has part: feature:1806671-1883724:-1:exon
subclass of: SO_0000010

110477377
type: Gene
SIO_000068: ncbigene

position:1806671:-1
position: 1806671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1883724:-1
position: 1883724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1806671-1883724:-1:exon

PCDH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PCDH1
product: protocadherin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031506048.1
SIO_010081: PCDH1
subclass of: SO_0000673
so part of: PCDH1
location: complement(join(1806671..1807508,1834048..1834267,1851202..1853394,1875298..1876112,1883562..1883724))
location: region:1806671-1883724:-1
so has part: feature:1883562-1883724:-1:exon
so has part: feature:1875298-1876112:-1:exon
so has part: feature:1851202-1853394:-1:exon
so has part: feature:1834048-1834267:-1:exon
so has part: feature:1806671-1807508:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1883562-1883724:-1:exon

position:1883562:-1
position: 1883562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1875298-1876112:-1:exon

position:1875298:-1
position: 1875298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1876112:-1
position: 1876112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1851202-1853394:-1:exon

position:1851202:-1
position: 1851202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1853394:-1
position: 1853394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1834048-1834267:-1:exon

position:1834048:-1
position: 1834048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1834267:-1
position: 1834267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1806671-1807508:-1:exon

position:1807508:-1
position: 1807508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCDH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PCDH1
product: protocadherin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031506047.1
SIO_010081: PCDH1
subclass of: SO_0000673
so part of: PCDH1
location: complement(join(1806671..1807508,1834048..1834267,1851202..1853394,1875298..1876112,1882109..1882256))
location: region:1806671-1882256:-1
so has part: feature:1882109-1882256:-1:exon
so has part: feature:1875298-1876112:-1:exon
so has part: feature:1851202-1853394:-1:exon
so has part: feature:1834048-1834267:-1:exon
so has part: feature:1806671-1807508:-1:exon

position:1882256:-1
position: 1882256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1882109-1882256:-1:exon

position:1882109:-1
position: 1882109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1875298-1876112:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1851202-1853394:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1834048-1834267:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1806671-1807508:-1:exon

PCDH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PCDH1
product: protocadherin 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031506049.1
SIO_010081: PCDH1
subclass of: SO_0000673
so part of: PCDH1
location: complement(join(1806671..1807508,1834048..1834267,1851202..1853394,1875298..1876112,1881638..1881687))
location: region:1806671-1881687:-1
so has part: feature:1881638-1881687:-1:exon
so has part: feature:1875298-1876112:-1:exon
so has part: feature:1851202-1853394:-1:exon
so has part: feature:1834048-1834267:-1:exon
so has part: feature:1806671-1807508:-1:exon

position:1881687:-1
position: 1881687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1881638-1881687:-1:exon

position:1881638:-1
position: 1881638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1875298-1876112:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1851202-1853394:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1834048-1834267:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1806671-1807508:-1:exon

PCDH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PCDH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-1 isoform X1
translation: METPRDQRAGARRGAQRRHHPTPLQRRMNPLASCLGLWLLCQLPALASGTRAVYKVQEEQPPNSLIGSLASDYGLPDMGHLYKLEVGAPYLRVDGKTGDIYTTETSIDRESLRECQHLLPGEPCFLEFEVSITNLNANSSPRLLEGQIEVLDINDNTPNFASPVLTLSIPENTNVGTLFPIPLAMDRDSGPNGVASYELMAGPEAQELFGLQVAEDQDEKQPQLIVMGNLDREQWDSYDLTIKVQDGGNPPRASSALLRITILDMNDNAPKFEKALYEAELSENSPVGHSVLQVKANDSDQGANAEIDYSFHQASDMVRRLLRLDRATGLITVQGPIDREDIGTLKFSVMAKDKGANPKSARAQVVVTIKDMNDNAPSIEIRGIGLVTHQDGMANISEDVPVETAVALVQVSDRDEGENAVVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVMDVNDNAPVFSQSFTEVAFPENNEPDELVMEVSATDADSGSNAKLVYSLVTDPSSKGSFTIDPDSGEIRVKAVLDREQRERYEFLVVAEDKGSPSKQGTASVAINVMDRNDNDPKFMLSGYNFSVMENMPPLSPVGMVTVIDADKGENARIQLSVEQDNGDFVIQNGTGTILSSISFDREQQSTYTFRLKAVDGGDPPRSAYVGVTINVLDENDNAPFITSPSNATYKHILPHTSPGQQVSKVKAEDIDSGINAELIYSITGGNPFELFQISPQSGDITLEKEILRKHHGLHRLVVRVNDKGKPSRHGTALVHFYVNETLANRTLLDTLVGHSLDTPLDIDIAGDPEYERSKQRSNILFGVIAGIVAVTLVIVLVVLVRYCRQREAKSGYQAGKKETKDLYAPKQASKSGKSKNKVKKSKSPKPPKPTEDEEETGLQKSLKFNLMNDSVSDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPATNTFVGTGDNNSTGSEQYSDYSYRTNPQKYTNKQLPHRRVTFSAASQAQDLQDPSQHSYYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTRECTEFGHSDTCWMPGQSSPSRRPKNALKLSTFVPYQDRGSQEQVGNGSPRLSEERSTKMANLRLLPTYSAFSNSSHEPCKDSPMEEIPLTQTSDFQPATTPSAQTTKREIYL
SIO_010081: PCDH1
subclass of: SO_0000673
so part of: PCDH1
location: complement(join(1807123..1807508,1834048..1834267,1851202..1853394,1875298..1876112,1882109..1882172))
location: region:1807123-1882172:-1
so has part: feature:1882109-1882172:-1:exon
so has part: feature:1875298-1876112:-1:exon
so has part: feature:1851202-1853394:-1:exon
so has part: feature:1834048-1834267:-1:exon
so has part: feature:1807123-1807508:-1:exon

XP_031361907.1
type: Protein
SIO_000068: ncbiprotein

position:1807123:-1
position: 1807123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1882172:-1
position: 1882172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1882109-1882172:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1875298-1876112:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1851202-1853394:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1834048-1834267:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1807123-1807508:-1:exon

PCDH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PCDH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-1 isoform X2
translation: MNPLASCLGLWLLCQLPALASGTRAVYKVQEEQPPNSLIGSLASDYGLPDMGHLYKLEVGAPYLRVDGKTGDIYTTETSIDRESLRECQHLLPGEPCFLEFEVSITNLNANSSPRLLEGQIEVLDINDNTPNFASPVLTLSIPENTNVGTLFPIPLAMDRDSGPNGVASYELMAGPEAQELFGLQVAEDQDEKQPQLIVMGNLDREQWDSYDLTIKVQDGGNPPRASSALLRITILDMNDNAPKFEKALYEAELSENSPVGHSVLQVKANDSDQGANAEIDYSFHQASDMVRRLLRLDRATGLITVQGPIDREDIGTLKFSVMAKDKGANPKSARAQVVVTIKDMNDNAPSIEIRGIGLVTHQDGMANISEDVPVETAVALVQVSDRDEGENAVVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVMDVNDNAPVFSQSFTEVAFPENNEPDELVMEVSATDADSGSNAKLVYSLVTDPSSKGSFTIDPDSGEIRVKAVLDREQRERYEFLVVAEDKGSPSKQGTASVAINVMDRNDNDPKFMLSGYNFSVMENMPPLSPVGMVTVIDADKGENARIQLSVEQDNGDFVIQNGTGTILSSISFDREQQSTYTFRLKAVDGGDPPRSAYVGVTINVLDENDNAPFITSPSNATYKHILPHTSPGQQVSKVKAEDIDSGINAELIYSITGGNPFELFQISPQSGDITLEKEILRKHHGLHRLVVRVNDKGKPSRHGTALVHFYVNETLANRTLLDTLVGHSLDTPLDIDIAGDPEYERSKQRSNILFGVIAGIVAVTLVIVLVVLVRYCRQREAKSGYQAGKKETKDLYAPKQASKSGKSKNKVKKSKSPKPPKPTEDEEETGLQKSLKFNLMNDSVSDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPATNTFVGTGDNNSTGSEQYSDYSYRTNPQKYTNKQLPHRRVTFSAASQAQDLQDPSQHSYYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTRECTEFGHSDTCWMPGQSSPSRRPKNALKLSTFVPYQDRGSQEQVGNGSPRLSEERSTKMANLRLLPTYSAFSNSSHEPCKDSPMEEIPLTQTSDFQPATTPSAQTTKREIYL
SIO_010081: PCDH1
subclass of: SO_0000673
so part of: PCDH1
location: complement(join(1807123..1807508,1834048..1834267,1851202..1853394,1875298..1876095))
location: region:1807123-1876095:-1
so has part: feature:1875298-1876095:-1:exon
so has part: feature:1851202-1853394:-1:exon
so has part: feature:1834048-1834267:-1:exon
so has part: feature:1807123-1807508:-1:exon

XP_031361908.1
type: Protein
SIO_000068: ncbiprotein

position:1876095:-1
position: 1876095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1875298-1876095:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1851202-1853394:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1834048-1834267:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1807123-1807508:-1:exon

PCDH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PCDH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-1 isoform X2
translation: MNPLASCLGLWLLCQLPALASGTRAVYKVQEEQPPNSLIGSLASDYGLPDMGHLYKLEVGAPYLRVDGKTGDIYTTETSIDRESLRECQHLLPGEPCFLEFEVSITNLNANSSPRLLEGQIEVLDINDNTPNFASPVLTLSIPENTNVGTLFPIPLAMDRDSGPNGVASYELMAGPEAQELFGLQVAEDQDEKQPQLIVMGNLDREQWDSYDLTIKVQDGGNPPRASSALLRITILDMNDNAPKFEKALYEAELSENSPVGHSVLQVKANDSDQGANAEIDYSFHQASDMVRRLLRLDRATGLITVQGPIDREDIGTLKFSVMAKDKGANPKSARAQVVVTIKDMNDNAPSIEIRGIGLVTHQDGMANISEDVPVETAVALVQVSDRDEGENAVVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVMDVNDNAPVFSQSFTEVAFPENNEPDELVMEVSATDADSGSNAKLVYSLVTDPSSKGSFTIDPDSGEIRVKAVLDREQRERYEFLVVAEDKGSPSKQGTASVAINVMDRNDNDPKFMLSGYNFSVMENMPPLSPVGMVTVIDADKGENARIQLSVEQDNGDFVIQNGTGTILSSISFDREQQSTYTFRLKAVDGGDPPRSAYVGVTINVLDENDNAPFITSPSNATYKHILPHTSPGQQVSKVKAEDIDSGINAELIYSITGGNPFELFQISPQSGDITLEKEILRKHHGLHRLVVRVNDKGKPSRHGTALVHFYVNETLANRTLLDTLVGHSLDTPLDIDIAGDPEYERSKQRSNILFGVIAGIVAVTLVIVLVVLVRYCRQREAKSGYQAGKKETKDLYAPKQASKSGKSKNKVKKSKSPKPPKPTEDEEETGLQKSLKFNLMNDSVSDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPATNTFVGTGDNNSTGSEQYSDYSYRTNPQKYTNKQLPHRRVTFSAASQAQDLQDPSQHSYYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTRECTEFGHSDTCWMPGQSSPSRRPKNALKLSTFVPYQDRGSQEQVGNGSPRLSEERSTKMANLRLLPTYSAFSNSSHEPCKDSPMEEIPLTQTSDFQPATTPSAQTTKREIYL
SIO_010081: PCDH1
subclass of: SO_0000673
so part of: PCDH1
location: complement(join(1807123..1807508,1834048..1834267,1851202..1853394,1875298..1876095))
location: region:1807123-1876095:-1
so has part: feature:1875298-1876095:-1:exon
so has part: feature:1851202-1853394:-1:exon
so has part: feature:1834048-1834267:-1:exon
so has part: feature:1807123-1807508:-1:exon

XP_031361909.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1875298-1876095:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1851202-1853394:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1834048-1834267:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1807123-1807508:-1:exon

PCDH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PCDH1
product: protocadherin 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031506050.1
SIO_010081: PCDH1
subclass of: SO_0000673
so part of: PCDH1
location: complement(join(1807399..1807508,1809504..1809546,1834048..1834267,1851202..1853394,1875298..1876112,1882109..1882256))
location: region:1807399-1882256:-1
so has part: feature:1882109-1882256:-1:exon
so has part: feature:1875298-1876112:-1:exon
so has part: feature:1851202-1853394:-1:exon
so has part: feature:1834048-1834267:-1:exon
so has part: feature:1809504-1809546:-1:exon
so has part: feature:1807399-1807508:-1:exon

position:1807399:-1
position: 1807399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1882109-1882256:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1875298-1876112:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1851202-1853394:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1834048-1834267:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1809504-1809546:-1:exon

position:1809504:-1
position: 1809504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1809546:-1
position: 1809546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1807399-1807508:-1:exon

PCDH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PCDH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-1 isoform X3
translation: METPRDQRAGARRGAQRRHHPTPLQRRMNPLASCLGLWLLCQLPALASGTRAVYKVQEEQPPNSLIGSLASDYGLPDMGHLYKLEVGAPYLRVDGKTGDIYTTETSIDRESLRECQHLLPGEPCFLEFEVSITNLNANSSPRLLEGQIEVLDINDNTPNFASPVLTLSIPENTNVGTLFPIPLAMDRDSGPNGVASYELMAGPEAQELFGLQVAEDQDEKQPQLIVMGNLDREQWDSYDLTIKVQDGGNPPRASSALLRITILDMNDNAPKFEKALYEAELSENSPVGHSVLQVKANDSDQGANAEIDYSFHQASDMVRRLLRLDRATGLITVQGPIDREDIGTLKFSVMAKDKGANPKSARAQVVVTIKDMNDNAPSIEIRGIGLVTHQDGMANISEDVPVETAVALVQVSDRDEGENAVVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVMDVNDNAPVFSQSFTEVAFPENNEPDELVMEVSATDADSGSNAKLVYSLVTDPSSKGSFTIDPDSGEIRVKAVLDREQRERYEFLVVAEDKGSPSKQGTASVAINVMDRNDNDPKFMLSGYNFSVMENMPPLSPVGMVTVIDADKGENARIQLSVEQDNGDFVIQNGTGTILSSISFDREQQSTYTFRLKAVDGGDPPRSAYVGVTINVLDENDNAPFITSPSNATYKHILPHTSPGQQVSKVKAEDIDSGINAELIYSITGGNPFELFQISPQSGDITLEKEILRKHHGLHRLVVRVNDKGKPSRHGTALVHFYVNETLANRTLLDTLVGHSLDTPLDIDIAGDPEYERSKQRSNILFGVIAGIVAVTLVIVLVVLVRYCRQREAKSGYQAGKKETKDLYAPKQASKSGKSKNKVKKSKSPKPPKPTEDEEETGLQKSLKFNLMNDSVSDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPATNTFVGTGDNNSTGSEQYSDYSYRTNPQKYTNKQLPHRRVTFSAASQAQDLQDPSQHSYYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENESPERSRL
SIO_010081: PCDH1
subclass of: SO_0000673
so part of: PCDH1
location: complement(join(1809521..1809546,1834048..1834267,1851202..1853394,1875298..1876112,1882109..1882172))
location: region:1809521-1882172:-1
so has part: feature:1882109-1882172:-1:exon
so has part: feature:1875298-1876112:-1:exon
so has part: feature:1851202-1853394:-1:exon
so has part: feature:1834048-1834267:-1:exon
so has part: feature:1809521-1809546:-1:exon

XP_031361910.1
type: Protein
SIO_000068: ncbiprotein

position:1809521:-1
position: 1809521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1882109-1882172:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1875298-1876112:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1851202-1853394:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1834048-1834267:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1809521-1809546:-1:exon

PCDH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PCDH1
product: protocadherin 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021548076.2
SIO_010081: PCDH1
subclass of: SO_0000673
so part of: PCDH1
location: complement(join(1871491..1873765,1875298..1876112,1882109..1882256))
location: region:1871491-1882256:-1
so has part: feature:1882109-1882256:-1:exon
so has part: feature:1875298-1876112:-1:exon
so has part: feature:1871491-1873765:-1:exon

position:1871491:-1
position: 1871491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1882109-1882256:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1875298-1876112:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1871491-1873765:-1:exon

position:1873765:-1
position: 1873765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCDH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PCDH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-1 isoform X4
translation: METPRDQRAGARRGAQRRHHPTPLQRRMNPLASCLGLWLLCQLPALASGTRAVYKVQEEQPPNSLIGSLASDYGLPDMGHLYKLEVGAPYLRVDGKTGDIYTTETSIDRESLRECQHLLPGEPCFLEFEVSITNLNANSSPRLLEGQIEVLDINDNTPNFASPVLTLSIPENTNVGTLFPIPLAMDRDSGPNGVASYELMAGPEAQELFGLQVAEDQDEKQPQLIVMGNLDREQWDSYDLTIKVQDGGNPPRASSALLRITILDMNDNAPKFEKALYEAELSENSPVGHSVLQVKANDSDQGANAEIDYSFHQASDIVRRLLRLDRATGLITVQGPIDREDIGTLKFSVMAKDKGANPKSARAQVVVTIKDMNDNAPSIEIRGIGLVTHQDGMANISEDVPVETAVALVQVSDRDEGENAVVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVMDVNDNAPVFSQSFTEVAFPENNEPDELVMEVSATDADSGSNAKLVYSLVTDPSSKGSFTIDPDSGEIRVKAVLDREQRERYEFLVVAEDKGSPSKQGTASVAINVMDRNDNDPKFMLSGYNFSVMENMPPLSPVGMVTVIDADKGENARIQLSVEQDNGDFVIQNGTGTILSSISFDREQQSTYTFRLKAVDGGDPPRSAYVGVTINVLDENDNAPFITSPSNATYKHILPHTSPGQQVSKVKAEDIDSGINAELIYSITGGNPFELFQISPQSGDITLEKEILRKHHGLHRLVVRVNDKGKPSRHGTALVHFYVNETLANRTLLDTLVGHSLDTPLDIDIAGDPEYERSKQRSNILFGVIAGIVAVTLVIVLVVLVRYCRQREAKSGYQAGKKETKDLYAPKQASKSGKSKNKVKKSKSPKPPKPTEDEEETGLQKSLKFNLMNDSVSDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPATNTFVGTGDNNSTGSEQYSDYSYRTNPQKYTNKQVGELILRPAAAPPLHRGAIWTEVWE
SIO_010081: PCDH1
subclass of: SO_0000673
so part of: PCDH1
location: complement(join(1871495..1873765,1875298..1876112,1882109..1882172))
location: region:1871495-1882172:-1
so has part: feature:1882109-1882172:-1:exon
so has part: feature:1875298-1876112:-1:exon
so has part: feature:1871495-1873765:-1:exon

XP_021403751.1
type: Protein
SIO_000068: ncbiprotein

position:1871495:-1
position: 1871495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1882109-1882172:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1875298-1876112:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1871495-1873765:-1:exon

LOC110480252
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110480252
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2037058..2041970
location: region:2037058-2041970:1
so has part: feature:2037058-2041970:1:exon
subclass of: SO_0000010

110480252
type: Gene
SIO_000068: ncbigene

position:2037058:1
position: 2037058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2041970:1
position: 2041970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2037058-2041970:1:exon

LOC110480252
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110480252
product: START domain-containing protein 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021548080.2
SIO_010081: LOC110480252
subclass of: SO_0000673
so part of: LOC110480252
location: join(2037058..2037493,2040379..2040526,2040619..2040722,2040808..2040925,2041111..2041163,2041638..2041970)
location: region:2037058-2041970:1
so has part: feature:2037058-2037493:1:exon
so has part: feature:2040379-2040526:1:exon
so has part: feature:2040619-2040722:1:exon
so has part: feature:2040808-2040925:1:exon
so has part: feature:2041111-2041163:1:exon
so has part: feature:2041638-2041970:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2037058-2037493:1:exon

position:2037493:1
position: 2037493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2040379-2040526:1:exon

position:2040379:1
position: 2040379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2040526:1
position: 2040526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2040619-2040722:1:exon

position:2040619:1
position: 2040619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2040722:1
position: 2040722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2040808-2040925:1:exon

position:2040808:1
position: 2040808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2040925:1
position: 2040925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2041111-2041163:1:exon

position:2041111:1
position: 2041111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2041163:1
position: 2041163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2041638-2041970:1:exon

position:2041638:1
position: 2041638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110480252
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110480252
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: START domain-containing protein 10
translation: MSRGGEVVYIPDDSDFSSFRDQCESLEGWHCRYNKAGVTVWSQGQEESCTVQKIKTRISCKDVPAETLYDVLHDTRYRSKWDSNMIETYDIGRLTVNADVGYYSWKCPSPLKNRDFVTLRSWLPLGNDYMIINYSVKHPKYPPRKDFVRAVSLQTGYLIKANGDGACILYYLTQVDPRGSLPKWVVNRVSQFVAPKAMKKIYKAGLKYPEWKRRHDPEYKPWVYPEQNTLPSVSLAELSVQHADSLENIDETGLPEEHLSTSDHEA
SIO_010081: LOC110480252
subclass of: SO_0000673
so part of: LOC110480252
location: join(2037329..2037493,2040379..2040526,2040619..2040722,2040808..2040925,2041111..2041163,2041638..2041850)
location: region:2037329-2041850:1
so has part: feature:2037329-2037493:1:exon
so has part: feature:2040379-2040526:1:exon
so has part: feature:2040619-2040722:1:exon
so has part: feature:2040808-2040925:1:exon
so has part: feature:2041111-2041163:1:exon
so has part: feature:2041638-2041850:1:exon

XP_021403755.1
type: Protein
SIO_000068: ncbiprotein

position:2037329:1
position: 2037329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2041850:1
position: 2041850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2037329-2037493:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2040379-2040526:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2040619-2040722:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2040808-2040925:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2041111-2041163:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2041638-2041850:1:exon

ARAP3
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: ARAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2049734..2070670
location: region:2049734-2070670:1
so has part: feature:2049734-2070670:1:exon
subclass of: SO_0000010

110480255
type: Gene
SIO_000068: ncbigene

position:2049734:1
position: 2049734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2070670:1
position: 2070670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2049734-2070670:1:exon

ARAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ARAP3
product: ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031506029.1
SIO_010081: ARAP3
subclass of: SO_0000673
so part of: ARAP3
location: join(2049734..2050860,2051416..2051474,2051750..2051814,2052235..2052305,2056700..2056969,2057299..2057368,2057768..2057888,2058080..2058267,2060419..2060525,2060630..2060829,2060975..2061060,2061706..2061888,2062100..2062262,2062569..2062700,2062773..2062929,2063074..2063176,2063380..2063578,2063662..2063725,2064531..2064694,2064827..2065039,2065180..2065285,2065760..2065907,2066070..2066138,2066410..2066484,2066597..2066711,2066865..2066993,2067180..2067313,2067457..2067539,2067747..2067782,2068210..2068273,2068367..2068504,2068781..2068819,2069467..2070670)
location: region:2049734-2070670:1
so has part: feature:2049734-2050860:1:exon
so has part: feature:2051416-2051474:1:exon
so has part: feature:2051750-2051814:1:exon
so has part: feature:2052235-2052305:1:exon
so has part: feature:2056700-2056969:1:exon
so has part: feature:2057299-2057368:1:exon
so has part: feature:2057768-2057888:1:exon
so has part: feature:2058080-2058267:1:exon
so has part: feature:2060419-2060525:1:exon
so has part: feature:2060630-2060829:1:exon
so has part: feature:2060975-2061060:1:exon
so has part: feature:2061706-2061888:1:exon
so has part: feature:2062100-2062262:1:exon
so has part: feature:2062569-2062700:1:exon
so has part: feature:2062773-2062929:1:exon
so has part: feature:2063074-2063176:1:exon
so has part: feature:2063380-2063578:1:exon
so has part: feature:2063662-2063725:1:exon
so has part: feature:2064531-2064694:1:exon
so has part: feature:2064827-2065039:1:exon
so has part: feature:2065180-2065285:1:exon
so has part: feature:2065760-2065907:1:exon
so has part: feature:2066070-2066138:1:exon
so has part: feature:2066410-2066484:1:exon
so has part: feature:2066597-2066711:1:exon
so has part: feature:2066865-2066993:1:exon
so has part: feature:2067180-2067313:1:exon
so has part: feature:2067457-2067539:1:exon
so has part: feature:2067747-2067782:1:exon
so has part: feature:2068210-2068273:1:exon
so has part: feature:2068367-2068504:1:exon
so has part: feature:2068781-2068819:1:exon
so has part: feature:2069467-2070670:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2049734-2050860:1:exon

position:2050860:1
position: 2050860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2051416-2051474:1:exon

position:2051416:1
position: 2051416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2051474:1
position: 2051474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2051750-2051814:1:exon

position:2051750:1
position: 2051750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2051814:1
position: 2051814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2052235-2052305:1:exon

position:2052235:1
position: 2052235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2052305:1
position: 2052305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2056700-2056969:1:exon

position:2056700:1
position: 2056700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2056969:1
position: 2056969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2057299-2057368:1:exon

position:2057299:1
position: 2057299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2057368:1
position: 2057368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2057768-2057888:1:exon

position:2057768:1
position: 2057768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2057888:1
position: 2057888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2058080-2058267:1:exon

position:2058080:1
position: 2058080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2058267:1
position: 2058267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2060419-2060525:1:exon

position:2060419:1
position: 2060419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2060525:1
position: 2060525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2060630-2060829:1:exon

position:2060630:1
position: 2060630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2060829:1
position: 2060829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2060975-2061060:1:exon

position:2060975:1
position: 2060975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2061060:1
position: 2061060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2061706-2061888:1:exon

position:2061706:1
position: 2061706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2061888:1
position: 2061888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2062100-2062262:1:exon

position:2062100:1
position: 2062100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2062262:1
position: 2062262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2062569-2062700:1:exon

position:2062569:1
position: 2062569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2062700:1
position: 2062700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2062773-2062929:1:exon

position:2062773:1
position: 2062773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2062929:1
position: 2062929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2063074-2063176:1:exon

position:2063074:1
position: 2063074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2063176:1
position: 2063176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2063380-2063578:1:exon

position:2063380:1
position: 2063380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2063578:1
position: 2063578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2063662-2063725:1:exon

position:2063662:1
position: 2063662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2063725:1
position: 2063725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2064531-2064694:1:exon

position:2064531:1
position: 2064531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2064694:1
position: 2064694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2064827-2065039:1:exon

position:2064827:1
position: 2064827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2065039:1
position: 2065039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2065180-2065285:1:exon

position:2065180:1
position: 2065180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2065285:1
position: 2065285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2065760-2065907:1:exon

position:2065760:1
position: 2065760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2065907:1
position: 2065907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2066070-2066138:1:exon

position:2066070:1
position: 2066070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2066138:1
position: 2066138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2066410-2066484:1:exon

position:2066410:1
position: 2066410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2066484:1
position: 2066484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2066597-2066711:1:exon

position:2066597:1
position: 2066597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2066711:1
position: 2066711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2066865-2066993:1:exon

position:2066865:1
position: 2066865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2066993:1
position: 2066993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2067180-2067313:1:exon

position:2067180:1
position: 2067180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2067313:1
position: 2067313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2067457-2067539:1:exon

position:2067457:1
position: 2067457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2067539:1
position: 2067539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2067747-2067782:1:exon

position:2067747:1
position: 2067747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2067782:1
position: 2067782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2068210-2068273:1:exon

position:2068210:1
position: 2068210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2068273:1
position: 2068273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2068367-2068504:1:exon

position:2068367:1
position: 2068367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2068504:1
position: 2068504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:2068781-2068819:1:exon

position:2068781:1
position: 2068781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2068819:1
position: 2068819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:2069467-2070670:1:exon

position:2069467:1
position: 2069467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ARAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3
translation: MSSPCGPDSDIADWLATIHLERYRDVFKQHGYHVARDATSLDSHHLQQIGITATGHRKRILALAQQTRMLSQSRGRAAAADGQSRGSEALDAPQEGKDAMRAEPGGTSDAFGTQPRVTVPSQAPPGDKDPAPAAVKPVPKPRTVFPRSKPEQGLVPVPPARSTVPAHGPGSERAPAAFVVLEGFVPGESSTDLESPEPGAAPGAAVAMGAIASRLRGRDGAREESRPPPRHGQSPETPERSPPAAPCVPPRHRQRGPAAEPSPGTAPAPGAAPAGTEPSPCPRAAPSPPGSGQGRLQMVSNAIYEGLERPAAAAEEPGGEDGPRGEGVPQPPAPSPQEHTQPEGSPGWPGGALPPIPQRPTGKPEVNDPPVSPYSETIFGHVALPKGVGISSEQSYEVVPELELEREGCRTSSECSSEGRSEDEESRSRLIERIAHNDTEGYSTVEAPCPEGAPFSLPAHLYPDEPLDDLTISPYASFTSLCEPRPTMLSGWLDKLSPQGNYVFQRRYVRFDGKNLMYFSSEKEPYPKGVIPLSVIEMARSTKDNKFQVITSHRIFVFRAENEAQRNEWCSTLQKKVMEQRLVGSRPRPANTAHCQKSGTLELKGQKSKVFAALSLPEMWLYKSEQFFKMGIAMCFIEMRGSTIREAKSRSFELITPSKTFSFVAESEREKREWMEALQEAIAEMLYDYEVAEKIWSNKANKYCADCWAQSPDWASINLCVVICKQCAGQHRSLGSNISKVQSLKLDTSVWSNEIVQLFIVLGNDRANWFWAARLPAAEAIAPDSGAEQRRDFITRKYREGRYRLPHPCYASQEEVLQALCTAVAGPALLKTILQFFSSSEAAVASDPAASEATPGADLWWGPESKRPRNLSGSPRAQDPGPEGVYNEITQPVAHSGYLYRATALPKLPGARKSKEDFQRTWCSLERALLFFETEKCTEPLGHIDSGDLLSLGVNRAHQTLTSPGPTERFRFTLELFLIGEKVQQLGTDGPETLQGWASAIGKWFTPVSCHCLLGYEFQRVGQLRYKCMLNPERWQRAFFILQKSHLFICPAEEDGAEDSINLRRLQELSLVPPMDTPEKKELLVLVEMGRTFYLQGLSRADSAAWYGDIQASAGGRGNALRDQQLSRGDIPIIVDSCIAFITQYGLRHEGIYRKNGAKSRIKVLMEEFRRDARNVKLRISDNFIEDVTDVLKRFFRELEDPIFTLELHPQWKEAAEISSKPQRLERYKELIHRLPRLNHKTLAALIGHLYRVQKCADLNQMSTKNLSLLFAPSLFQTDGKGEHEVKVMEDLIDNYVSIFNIDEDQVSQMDLENSLITTWKDTQLSQAGDLIIEVYLEQKVPDCCVTLKVSPSMTAEELTNQVLEMRNVAASLDIWLTFEALENGELERPLHPKEKVLEQALQWCKLPEPSAAYLLVRKVPIGEGSCLFTGAKRETPKCGLLKCREEPPRLLGNKFQERYFVIQDRRLLLLKEKRSVKPEREWPLDAAKVYMGIRKKLKPPAQWGFTLTLDKQQLYLVCSGQAELWDWTTSILKAQHDDLRPVVLRRRSSSDLAKQKFGTMPLVPLHGDSTDATMLSANQTLRRLHTRRTLSMFFPMKIHQDSLEEQREKEADTDPVYEEVGNFPELAALDLGQGLLAELVAVPPVDRSKKPSPFPEEPPATALRSSLPASPAHRVTGPSVTKAVSLERGLNLESNKAPNPGLRPTKTSSLERNVEPSLALGRDWEQAATLGSSPTAETSLELPKKRSLQPPSPISDKLMQELSSVILRKSDGQPPGPGQPVT
SIO_010081: ARAP3
subclass of: SO_0000673
so part of: ARAP3
location: join(2049827..2050860,2051416..2051474,2051750..2051814,2052235..2052305,2056700..2056969,2057299..2057368,2057768..2057888,2058080..2058267,2060419..2060525,2060630..2060829,2060975..2061060,2061706..2061888,2062100..2062262,2062569..2062700,2062773..2062929,2063074..2063176,2063380..2063578,2063662..2063725,2064531..2064694,2064827..2065039,2065180..2065285,2065760..2065907,2066070..2066138,2066410..2066484,2066597..2066711,2066865..2066993,2067180..2067313,2067457..2067539,2067747..2067782,2068210..2068273,2068367..2068504,2068781..2068819,2069467..2070033)
location: region:2049827-2070033:1
so has part: feature:2049827-2050860:1:exon
so has part: feature:2051416-2051474:1:exon
so has part: feature:2051750-2051814:1:exon
so has part: feature:2052235-2052305:1:exon
so has part: feature:2056700-2056969:1:exon
so has part: feature:2057299-2057368:1:exon
so has part: feature:2057768-2057888:1:exon
so has part: feature:2058080-2058267:1:exon
so has part: feature:2060419-2060525:1:exon
so has part: feature:2060630-2060829:1:exon
so has part: feature:2060975-2061060:1:exon
so has part: feature:2061706-2061888:1:exon
so has part: feature:2062100-2062262:1:exon
so has part: feature:2062569-2062700:1:exon
so has part: feature:2062773-2062929:1:exon
so has part: feature:2063074-2063176:1:exon
so has part: feature:2063380-2063578:1:exon
so has part: feature:2063662-2063725:1:exon
so has part: feature:2064531-2064694:1:exon
so has part: feature:2064827-2065039:1:exon
so has part: feature:2065180-2065285:1:exon
so has part: feature:2065760-2065907:1:exon
so has part: feature:2066070-2066138:1:exon
so has part: feature:2066410-2066484:1:exon
so has part: feature:2066597-2066711:1:exon
so has part: feature:2066865-2066993:1:exon
so has part: feature:2067180-2067313:1:exon
so has part: feature:2067457-2067539:1:exon
so has part: feature:2067747-2067782:1:exon
so has part: feature:2068210-2068273:1:exon
so has part: feature:2068367-2068504:1:exon
so has part: feature:2068781-2068819:1:exon
so has part: feature:2069467-2070033:1:exon

XP_031361889.1
type: Protein
SIO_000068: ncbiprotein

position:2049827:1
position: 2049827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2070033:1
position: 2070033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2049827-2050860:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2051416-2051474:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2051750-2051814:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2052235-2052305:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2056700-2056969:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2057299-2057368:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2057768-2057888:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2058080-2058267:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2060419-2060525:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2060630-2060829:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2060975-2061060:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2061706-2061888:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2062100-2062262:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2062569-2062700:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2062773-2062929:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2063074-2063176:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2063380-2063578:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2063662-2063725:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2064531-2064694:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2064827-2065039:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2065180-2065285:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2065760-2065907:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2066070-2066138:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2066410-2066484:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2066597-2066711:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2066865-2066993:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2067180-2067313:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2067457-2067539:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2067747-2067782:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2068210-2068273:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2068367-2068504:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2068781-2068819:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2069467-2070033:1:exon

LOC116184135
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116184135
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2070883..2073364)
location: region:2070883-2073364:-1
so has part: feature:2070883-2073364:-1:exon
subclass of: SO_0000010

116184135
type: Gene
SIO_000068: ncbigene

position:2070883:-1
position: 2070883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2073364:-1
position: 2073364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2070883-2073364:-1:exon

LOC116184135
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC116184135
product: proteinase-activated receptor 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031506053.1
SIO_010081: LOC116184135
subclass of: SO_0000673
so part of: LOC116184135
location: complement(join(2070883..2071943,2073235..2073364))
location: region:2070883-2073364:-1
so has part: feature:2073235-2073364:-1:exon
so has part: feature:2070883-2071943:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2073235-2073364:-1:exon

position:2073235:-1
position: 2073235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2070883-2071943:-1:exon

position:2071943:-1
position: 2071943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116184135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC116184135
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteinase-activated receptor 3-like
translation: MSRRGLSPSAAACVTLLLSWAWLGSATQPSSAPNKKGRALVPLTPQEKNMCSQASEEDFLNSTLSTRLLPALYSMVLLVGLPANALACWVLATNFRRCSSTIFLLNLAGADLLFVLLLPFKISYHLLGNHWPFGDYLCRTMVAFFYGNMYSSILFLTCIGLERYISVAHPFLWKGSSWTRGKVGICVGIWLLVGLGMSPLLLRSHTHNISSLNITTCHDVLEKETQRFFGYYFLSLVGLGFGLPFVLMIISYSCILARLLAKGGSHGQVVRVLALVLLVFILCFTPSNVMLFIHYMLEPTGCNNGTYISYALVLVLSACNNCFDPFIYFYVSRDFRAWVRDAGGCCLLETSSVKSTEKTALPLRSSGQSQGCQDVSSCSGDGGA
SIO_010081: LOC116184135
subclass of: SO_0000673
so part of: LOC116184135
location: complement(join(2070883..2071943,2073235..2073328))
location: region:2070883-2073328:-1
so has part: feature:2073235-2073328:-1:exon
so has part: feature:2070883-2071943:-1:exon

XP_031361913.1
type: Protein
SIO_000068: ncbiprotein

position:2073328:-1
position: 2073328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2073235-2073328:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2070883-2071943:-1:exon

FCHSD1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: FCHSD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2075744..2081309
location: region:2075744-2081309:1
so has part: feature:2075744-2081309:1:exon
subclass of: SO_0000010

110480254
type: Gene
SIO_000068: ncbigene

position:2075744:1
position: 2075744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2081309:1
position: 2081309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2075744-2081309:1:exon

FCHSD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: FCHSD1
product: FCH and double SH3 domains 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031506006.1
SIO_010081: FCHSD1
subclass of: SO_0000673
so part of: FCHSD1
location: join(2075744..2075764,2076019..2076116,2076432..2076477,2077309..2077382,2077630..2077774,2077850..2077986,2078061..2078124,2078219..2078347,2078505..2078627,2078707..2078802,2078879..2078986,2079090..2079194,2079368..2079598,2079684..2079767,2079875..2080031,2080119..2080324,2080428..2080664,2080825..2081309)
location: region:2075744-2081309:1
so has part: feature:2075744-2075764:1:exon
so has part: feature:2076019-2076116:1:exon
so has part: feature:2076432-2076477:1:exon
so has part: feature:2077309-2077382:1:exon
so has part: feature:2077630-2077774:1:exon
so has part: feature:2077850-2077986:1:exon
so has part: feature:2078061-2078124:1:exon
so has part: feature:2078219-2078347:1:exon
so has part: feature:2078505-2078627:1:exon
so has part: feature:2078707-2078802:1:exon
so has part: feature:2078879-2078986:1:exon
so has part: feature:2079090-2079194:1:exon
so has part: feature:2079368-2079598:1:exon
so has part: feature:2079684-2079767:1:exon
so has part: feature:2079875-2080031:1:exon
so has part: feature:2080119-2080324:1:exon
so has part: feature:2080428-2080664:1:exon
so has part: feature:2080825-2081309:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2075744-2075764:1:exon

position:2075764:1
position: 2075764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2076019-2076116:1:exon

position:2076019:1
position: 2076019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2076116:1
position: 2076116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2076432-2076477:1:exon

position:2076432:1
position: 2076432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2076477:1
position: 2076477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2077309-2077382:1:exon

position:2077309:1
position: 2077309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2077382:1
position: 2077382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2077630-2077774:1:exon

position:2077630:1
position: 2077630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2077774:1
position: 2077774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2077850-2077986:1:exon

position:2077850:1
position: 2077850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2077986:1
position: 2077986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2078061-2078124:1:exon

position:2078061:1
position: 2078061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2078124:1
position: 2078124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2078219-2078347:1:exon

position:2078219:1
position: 2078219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2078347:1
position: 2078347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2078505-2078627:1:exon

position:2078505:1
position: 2078505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2078627:1
position: 2078627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2078707-2078802:1:exon

position:2078707:1
position: 2078707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2078802:1
position: 2078802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2078879-2078986:1:exon

position:2078879:1
position: 2078879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2078986:1
position: 2078986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2079090-2079194:1:exon

position:2079090:1
position: 2079090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2079194:1
position: 2079194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2079368-2079598:1:exon

position:2079368:1
position: 2079368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2079598:1
position: 2079598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2079684-2079767:1:exon

position:2079684:1
position: 2079684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2079767:1
position: 2079767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2079875-2080031:1:exon

position:2079875:1
position: 2079875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2080031:1
position: 2080031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2080119-2080324:1:exon

position:2080119:1
position: 2080119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2080324:1
position: 2080324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2080428-2080664:1:exon

position:2080428:1
position: 2080428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2080664:1
position: 2080664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2080825-2081309:1:exon

position:2080825:1
position: 2080825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FCHSD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: FCHSD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-BAR and double SH3 domains protein 1
translation: MQPPPRKVKLTQELRVHLLEQLSGLQSKQQRDAELLEDIRSYSKQRATIDREYGQALQRLASQFVKRDWQRGRGEAGDSRSVAAVWKGVIEGTAHAGQVRVTASESYRALAAEAARSARLSKERTLKKGIERLQKAQVELLETVKELDKAKKQFSHLQRSSEVAKDKAADVEARLRRSDRRIFHTKASLQKLSAKFSARLAEHSRQLAGVQNEYSFALVSASAHLEHYQRVELPAAMQALDGDLYERLREHLSAASRTEVETCRATRDWFQGIVEASARVCREQDLLLFLQDHPAFSLAPEQRFQLAGVEEVCLLPPADDGASLEKEARRWATRVARERKNRAHSEEVLQRLEARRQQGLEAEAAAVERQMEEVRENIRKAEVSRVKAEARLALLRAAGLDVDAWLAGAMVGTGEETPTGLDPGEFDDYEDSDEPDEDDEPGPAARSYPYTCRVIFGYQGCQADELSISQGEELEIIEDGDAEEWVKARNKAGQVGYVPEKYLLSVGCDLGAGLGPPGPSALQRQLSSIMAAELVLEPGAWLVRALYDYEGQSPEELSFPEGAIIRVLPRAAGEVDDGFWTGDFDGRVGVFPSLVVEELTGAREGAGQELPSPSPPPFSPPGLAPGASLVPSPAPEMVLGGECWGNWEGAGGAREARLSCWALPGCRQDGTGSGQSSPDLAATRLRPLRAPPPPPGRAPEPDPELHFS
SIO_010081: FCHSD1
subclass of: SO_0000673
so part of: FCHSD1
location: join(2075744..2075764,2076019..2076116,2076432..2076477,2077309..2077382,2077630..2077774,2077850..2077986,2078061..2078124,2078219..2078347,2078505..2078627,2078707..2078802,2078879..2078986,2079090..2079194,2079368..2079598,2079684..2079767,2079875..2080031,2080119..2080324,2080428..2080664,2080825..2080890)
location: region:2075744-2080890:1
so has part: feature:2075744-2075764:1:exon
so has part: feature:2076019-2076116:1:exon
so has part: feature:2076432-2076477:1:exon
so has part: feature:2077309-2077382:1:exon
so has part: feature:2077630-2077774:1:exon
so has part: feature:2077850-2077986:1:exon
so has part: feature:2078061-2078124:1:exon
so has part: feature:2078219-2078347:1:exon
so has part: feature:2078505-2078627:1:exon
so has part: feature:2078707-2078802:1:exon
so has part: feature:2078879-2078986:1:exon
so has part: feature:2079090-2079194:1:exon
so has part: feature:2079368-2079598:1:exon
so has part: feature:2079684-2079767:1:exon
so has part: feature:2079875-2080031:1:exon
so has part: feature:2080119-2080324:1:exon
so has part: feature:2080428-2080664:1:exon
so has part: feature:2080825-2080890:1:exon

XP_031361866.1
type: Protein
SIO_000068: ncbiprotein

position:2080890:1
position: 2080890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2075744-2075764:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2076019-2076116:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2076432-2076477:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2077309-2077382:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2077630-2077774:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2077850-2077986:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2078061-2078124:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2078219-2078347:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2078505-2078627:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2078707-2078802:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2078879-2078986:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2079090-2079194:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2079368-2079598:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2079684-2079767:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2079875-2080031:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2080119-2080324:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2080428-2080664:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2080825-2080890:1:exon

LOC110480253
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110480253
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2082018..2093158)
location: region:2082018-2093158:-1
so has part: feature:2082018-2093158:-1:exon
subclass of: SO_0000010

110480253
type: Gene
SIO_000068: ncbigene

position:2082018:-1
position: 2082018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2093158:-1
position: 2093158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2082018-2093158:-1:exon

LOC110480253
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110480253
product: RELT-like protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021548081.2
SIO_010081: LOC110480253
subclass of: SO_0000673
so part of: LOC110480253
location: complement(join(2082018..2082233,2083724..2084369,2089555..2089743,2090002..2090065,2090145..2090207,2091938..2092151,2092826..2093158))
location: region:2082018-2093158:-1
so has part: feature:2092826-2093158:-1:exon
so has part: feature:2091938-2092151:-1:exon
so has part: feature:2090145-2090207:-1:exon
so has part: feature:2090002-2090065:-1:exon
so has part: feature:2089555-2089743:-1:exon
so has part: feature:2083724-2084369:-1:exon
so has part: feature:2082018-2082233:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2092826-2093158:-1:exon

position:2092826:-1
position: 2092826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2091938-2092151:-1:exon

position:2091938:-1
position: 2091938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2092151:-1
position: 2092151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2090145-2090207:-1:exon

position:2090145:-1
position: 2090145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2090207:-1
position: 2090207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2090002-2090065:-1:exon

position:2090002:-1
position: 2090002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2090065:-1
position: 2090065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2089555-2089743:-1:exon

position:2089555:-1
position: 2089555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2089743:-1
position: 2089743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2083724-2084369:-1:exon

position:2083724:-1
position: 2083724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2084369:-1
position: 2084369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2082018-2082233:-1:exon

position:2082233:-1
position: 2082233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110480253
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110480253
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RELT-like protein 2
translation: MSDHHHPSDGESDPQHGITVVFLLVLVFFIMGLVGFLICHVLKKKGYRCRTFRDDLDPDDKDEVEELQDDEAEKNDDTVEKIVKIIIQNEANVEALKEMLGENEEMPVPVPSLCPHSSSQDGGPPHHHTVHLGSTQAPCIHCSRRKRHPLQRQGRSKEGKSRMHPGETTVFSVGRFRVTHIGKKPSVQEQQDGVLPAGSREPSTEELERSSEMLQRERALNGTVPTAGLQNGAIPTGTQSGRSAEQSLSASPAANTPASSGSRDSRRAAAGPGTARSGPVGPGPAQSGPVGPGPAQSGPVGPLQDAGSAPGSSSRQRRLMSMPALGASSPNIPAELAREGAGVCLEEMGLASADEVSDIHGSLSLQEQADELGRDDSSRKQSGGEDGKQQEPSATEQDRV
SIO_010081: LOC110480253
subclass of: SO_0000673
so part of: LOC110480253
location: complement(join(2082201..2082233,2083724..2084369,2089555..2089743,2090002..2090065,2090145..2090207,2091938..2092145))
location: region:2082201-2092145:-1
so has part: feature:2091938-2092145:-1:exon
so has part: feature:2090145-2090207:-1:exon
so has part: feature:2090002-2090065:-1:exon
so has part: feature:2089555-2089743:-1:exon
so has part: feature:2083724-2084369:-1:exon
so has part: feature:2082201-2082233:-1:exon

XP_021403756.1
type: Protein
SIO_000068: ncbiprotein

position:2082201:-1
position: 2082201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2092145:-1
position: 2092145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2091938-2092145:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2090145-2090207:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2090002-2090065:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2089555-2089743:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2083724-2084369:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2082201-2082233:-1:exon

LOC110481540
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110481540
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2098273..2103824)
location: region:2098273-2103824:-1
so has part: feature:2098273-2103824:-1:exon
subclass of: SO_0000010

110481540
type: Gene
SIO_000068: ncbigene

position:2098273:-1
position: 2098273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2103824:-1
position: 2103824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2098273-2103824:-1:exon

LOC110481540
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110481540
product: RELT-like protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031506054.1
SIO_010081: LOC110481540
subclass of: SO_0000673
so part of: LOC110481540
location: complement(join(2098273..2098297,2100225..2100413,2100672..2100735,2100815..2100877,2102604..2102817,2103492..2103824))
location: region:2098273-2103824:-1
so has part: feature:2103492-2103824:-1:exon
so has part: feature:2102604-2102817:-1:exon
so has part: feature:2100815-2100877:-1:exon
so has part: feature:2100672-2100735:-1:exon
so has part: feature:2100225-2100413:-1:exon
so has part: feature:2098273-2098297:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2103492-2103824:-1:exon

position:2103492:-1
position: 2103492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2102604-2102817:-1:exon

position:2102604:-1
position: 2102604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2102817:-1
position: 2102817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2100815-2100877:-1:exon

position:2100815:-1
position: 2100815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2100877:-1
position: 2100877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2100672-2100735:-1:exon

position:2100672:-1
position: 2100672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2100735:-1
position: 2100735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2100225-2100413:-1:exon

position:2100225:-1
position: 2100225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2100413:-1
position: 2100413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2098273-2098297:-1:exon

position:2098297:-1
position: 2098297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110481540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110481540
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RELT-like protein 2
translation: MSDHHHPSDGESDPQHGITVVFLLVLVFFIMGLVGFLICHVLKKKGYRCRTFRDDLDPDDKDEVEELQDDEAEKNDDTVEKIVKIIIQNEANVEALKEMLGENEEMPVPVPSLCPHSSSQDGGPPHHHTVHLGSTQAPCIHCSRRKRHPLQRQGRSKEGKSRMHPGETTVFSVGSYRLGSLR
SIO_010081: LOC110481540
subclass of: SO_0000673
so part of: LOC110481540
location: complement(join(2098273..2098297,2100225..2100413,2100672..2100735,2100815..2100877,2102604..2102811))
location: region:2098273-2102811:-1
so has part: feature:2102604-2102811:-1:exon
so has part: feature:2100815-2100877:-1:exon
so has part: feature:2100672-2100735:-1:exon
so has part: feature:2100225-2100413:-1:exon
so has part: feature:2098273-2098297:-1:exon

XP_031361914.1
type: Protein
SIO_000068: ncbiprotein

position:2102811:-1
position: 2102811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2102604-2102811:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2100815-2100877:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2100672-2100735:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2100225-2100413:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2098273-2098297:-1:exon

HDAC3
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: HDAC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2109480..2122001
location: region:2109480-2122001:1
so has part: feature:2109480-2122001:1:exon
subclass of: SO_0000010

110481539
type: Gene
SIO_000068: ncbigene

position:2109480:1
position: 2109480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2122001:1
position: 2122001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2109480-2122001:1:exon

HDAC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: HDAC3
product: histone deacetylase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 8 ESTs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_021550242.2
SIO_010081: HDAC3
subclass of: SO_0000673
so part of: HDAC3
location: join(2109480..2109600,2110352..2110434,2113302..2113444,2115485..2115566,2115739..2115795,2115886..2115941,2117143..2117276,2117525..2117605,2117695..2117768,2117902..2117966,2118706..2118795,2118885..2118943,2119404..2119483,2119770..2119927,2120818..2122001)
location: region:2109480-2122001:1
so has part: feature:2109480-2109600:1:exon
so has part: feature:2110352-2110434:1:exon
so has part: feature:2113302-2113444:1:exon
so has part: feature:2115485-2115566:1:exon
so has part: feature:2115739-2115795:1:exon
so has part: feature:2115886-2115941:1:exon
so has part: feature:2117143-2117276:1:exon
so has part: feature:2117525-2117605:1:exon
so has part: feature:2117695-2117768:1:exon
so has part: feature:2117902-2117966:1:exon
so has part: feature:2118706-2118795:1:exon
so has part: feature:2118885-2118943:1:exon
so has part: feature:2119404-2119483:1:exon
so has part: feature:2119770-2119927:1:exon
so has part: feature:2120818-2122001:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2109480-2109600:1:exon

position:2109600:1
position: 2109600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2110352-2110434:1:exon

position:2110352:1
position: 2110352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2110434:1
position: 2110434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2113302-2113444:1:exon

position:2113302:1
position: 2113302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2113444:1
position: 2113444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2115485-2115566:1:exon

position:2115485:1
position: 2115485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2115566:1
position: 2115566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2115739-2115795:1:exon

position:2115739:1
position: 2115739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2115795:1
position: 2115795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2115886-2115941:1:exon

position:2115886:1
position: 2115886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2115941:1
position: 2115941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2117143-2117276:1:exon

position:2117143:1
position: 2117143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2117276:1
position: 2117276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2117525-2117605:1:exon

position:2117525:1
position: 2117525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2117605:1
position: 2117605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2117695-2117768:1:exon

position:2117695:1
position: 2117695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2117768:1
position: 2117768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2117902-2117966:1:exon

position:2117902:1
position: 2117902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2117966:1
position: 2117966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2118706-2118795:1:exon

position:2118706:1
position: 2118706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2118795:1
position: 2118795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2118885-2118943:1:exon

position:2118885:1
position: 2118885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2118943:1
position: 2118943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2119404-2119483:1:exon

position:2119404:1
position: 2119404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2119483:1
position: 2119483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2119770-2119927:1:exon

position:2119770:1
position: 2119770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2119927:1
position: 2119927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2120818-2122001:1:exon

position:2120818:1
position: 2120818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HDAC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: HDAC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 3
translation: MAKTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDYYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVDEPISDELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPSDLLSYDRTDEPDPEERGSEENYNRPEAPNEFYDGDHDNDKESDVEI
SIO_010081: HDAC3
subclass of: SO_0000673
so part of: HDAC3
location: join(2109546..2109600,2110352..2110434,2113302..2113444,2115485..2115566,2115739..2115795,2115886..2115941,2117143..2117276,2117525..2117605,2117695..2117768,2117902..2117966,2118706..2118795,2118885..2118943,2119404..2119483,2119770..2119927,2120818..2120887)
location: region:2109546-2120887:1
so has part: feature:2109546-2109600:1:exon
so has part: feature:2110352-2110434:1:exon
so has part: feature:2113302-2113444:1:exon
so has part: feature:2115485-2115566:1:exon
so has part: feature:2115739-2115795:1:exon
so has part: feature:2115886-2115941:1:exon
so has part: feature:2117143-2117276:1:exon
so has part: feature:2117525-2117605:1:exon
so has part: feature:2117695-2117768:1:exon
so has part: feature:2117902-2117966:1:exon
so has part: feature:2118706-2118795:1:exon
so has part: feature:2118885-2118943:1:exon
so has part: feature:2119404-2119483:1:exon
so has part: feature:2119770-2119927:1:exon
so has part: feature:2120818-2120887:1:exon

XP_021405917.1
type: Protein
SIO_000068: ncbiprotein

position:2109546:1
position: 2109546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2120887:1
position: 2120887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2109546-2109600:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2110352-2110434:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2113302-2113444:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2115485-2115566:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2115739-2115795:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2115886-2115941:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2117143-2117276:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2117525-2117605:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2117695-2117768:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2117902-2117966:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2118706-2118795:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2118885-2118943:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2119404-2119483:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2119770-2119927:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2120818-2120887:1:exon

LOC110481538
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110481538
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2168806..2224012)
location: region:2168806-2224012:-1
so has part: feature:2168806-2224012:-1:exon
subclass of: SO_0000010

110481538
type: Gene
SIO_000068: ncbigene

position:2168806:-1
position: 2168806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2224012:-1
position: 2224012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2168806-2224012:-1:exon

LOC110481538
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110481538
product: protocadherin gamma-B3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 20 ESTs, 88 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031506055.1
SIO_010081: LOC110481538
subclass of: SO_0000673
so part of: LOC110481538
location: complement(join(2168806..2171221,2176877..2176965,2191229..2191287,2211107..2211728,2212088..2213589,2213793..2214041,2217287..2217547,2222651..2224012))
location: region:2168806-2224012:-1
so has part: feature:2222651-2224012:-1:exon
so has part: feature:2217287-2217547:-1:exon
so has part: feature:2213793-2214041:-1:exon
so has part: feature:2212088-2213589:-1:exon
so has part: feature:2211107-2211728:-1:exon
so has part: feature:2191229-2191287:-1:exon
so has part: feature:2176877-2176965:-1:exon
so has part: feature:2168806-2171221:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2222651-2224012:-1:exon

position:2222651:-1
position: 2222651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2217287-2217547:-1:exon

position:2217287:-1
position: 2217287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2217547:-1
position: 2217547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2213793-2214041:-1:exon

position:2213793:-1
position: 2213793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2214041:-1
position: 2214041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2212088-2213589:-1:exon

position:2212088:-1
position: 2212088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2213589:-1
position: 2213589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2211107-2211728:-1:exon

position:2211107:-1
position: 2211107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2211728:-1
position: 2211728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2191229-2191287:-1:exon

position:2191229:-1
position: 2191229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2191287:-1
position: 2191287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2176877-2176965:-1:exon

position:2176877:-1
position: 2176877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2176965:-1
position: 2176965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2168806-2171221:-1:exon

position:2171221:-1
position: 2171221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110481538
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110481538
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-B3
translation: MAVRRRQRRGPGGGRALLAAVLLCVWGRAAAERLRYAIPEELGRGSLVGPLARDLGLSADELPARKLRLSEEKQYFTVSEENGNLYVNERLDREEICGESATCSVSFEVLVNNPLNIFHVDVTIEDVNDNSPAFTKAVLDLEIGEWISPGARFPLEMARDEDAGSNSLLAYQLISNPSFSLSMQDKPGENKQPELILERGLDREVQSAFELVLTAVDGGDPARSGTIQVRINVTDANDNPPVFSKRLYEARIAENLAVETVVLRVRATDADAGSNGRVSYSFGSVPEAVRALFAIDSETGEIRTAGLLDFEEKNKYMFGVEGRDGGGLSSHCEVQIYITDENDNMPEITILSLSSPVPEDAPTGTVVALLKVRDRDSGENGQVSCELSGEAPLSIVASSGGSYKVVTAGALDREQASEHRVTVVARDRGRPALWSSTELVLEVSDVNDNAPVFEQLLPADSGALRGVPVSHFVGIDGVRAFLQSYSHEVSLTADSRKSQLRFSAGSCCDTLPARPPPDEPAPLLGDHDPAGALPADPAPPSLMGVSSQRGGPGRDPLERRPAAAVARRRLRVPLLAAAERRWSRRRRRRSVLPPQAARSPGAGRSGSGTATGSSGGGGEGRGEAAAVLLCVWGRAAAERLRYAIPEELGRGSLVGPLARDLGLSADELPARKLQVASAGKKQLQYFTVSEENGNLYVNERLDREEMCGESATCSVSFEVLVHNPLNVFRVEVNIQDVNDNAPRFLRENIHFEIIESTPPGARFSVDVAEDADVGSNSLQGYKLETNGYFAVEVKESQDSSKFAELVLRRALDRESEPSLRLLLTALDGGDPPLTGTAQLWINVTDANDNPPVFAQDRYRVSLREDTPPGSTVLNVSASDADAGANAHITYGFSKMPTKMLQKFLVDAESGTISLQKELDFEDMRGYVLLVEARDGGGLVAHCKVEVEVLDVNDNAPEITILSLSSPVPEDVPVGTVVAVLNVRDRDSGENGQVSCELSGEAPLSIVASSGGSYKVVTAGALDREQASEHRVTVVARDRGRPALWSSTELVLEVSDVNDNAPVFEEAAYSAYVAENNAAGALVLRVQARDADAGANGRVSYWLAGGSAGAAGAAPLVSVEARSGALRNAWLSYELVQASEPALFRVGLHSGEVRTARAVSERDAAKQRVVAVVKDHGQPALSATATATLHVVLAESLQEALPELSDRDAVSHLSSDLNLILVVSLSVVSLLFVSTVIFVFFFKCRQSRSPPIFITSDKELYSTLGSKAPYNYCSSTLPLPYSYEVCLASESGQKDFTFLRPGVAALSTNVLSADPGSGTRSGEDPPSTGSSTQQAQPNTDWRFSQTQRPGTSGSQNGEEAGAWPNNQFDTEMLQAMILASANEAADGNSTLGGGNGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDAKNAAPAAGNKKKSGKKEKK
SIO_010081: LOC110481538
subclass of: SO_0000673
so part of: LOC110481538
location: complement(join(2170995..2171221,2176877..2176965,2191229..2191287,2211107..2211728,2212088..2213589,2213793..2214041,2217287..2217547,2222651..2224012))
location: region:2170995-2224012:-1
so has part: feature:2222651-2224012:-1:exon
so has part: feature:2217287-2217547:-1:exon
so has part: feature:2213793-2214041:-1:exon
so has part: feature:2212088-2213589:-1:exon
so has part: feature:2211107-2211728:-1:exon
so has part: feature:2191229-2191287:-1:exon
so has part: feature:2176877-2176965:-1:exon
so has part: feature:2170995-2171221:-1:exon

XP_031361915.1
type: Protein
SIO_000068: ncbiprotein

position:2170995:-1
position: 2170995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2222651-2224012:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2217287-2217547:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2213793-2214041:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2212088-2213589:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2211107-2211728:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2191229-2191287:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2176877-2176965:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2170995-2171221:-1:exon

LOC110483896
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110483896
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2245343..>2252749
location: region:2245343-2252749:1
so has part: feature:2245343-2252749:1:exon
subclass of: SO_0000010

110483896
type: Gene
SIO_000068: ncbigene

position:2245343:1
position: 2245343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2252749:1
position: 2252749
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2245343-2252749:1:exon

LOC110483896
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110483896
product: protocadherin gamma-B5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 76% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021554127.2
SIO_010081: LOC110483896
subclass of: SO_0000673
so part of: LOC110483896
location: join(2245343..2245378,2246461..2246706,2251790..>2252749)
location: region:2245343-2252749:1
so has part: feature:2245343-2245378:1:exon
so has part: feature:2246461-2246706:1:exon
so has part: feature:2251790-2252749:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2245343-2245378:1:exon

position:2245378:1
position: 2245378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2246461-2246706:1:exon

position:2246461:1
position: 2246461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2246706:1
position: 2246706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2251790-2252749:1:exon

position:2251790:1
position: 2251790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110483896
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110483896
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-B5-like
translation: MTWNKVHGPAAVEELQRCLSAVAAGSRARCRRRAPPKPGPLERGRPAAAVARRRLRVPLLAAAERRWSRRRRRRSVLPPQAARSPGAGRSGSGTVLVHNPLNIFQVEVAIEDVNDNSPTFSKAVLDLEMGEWTLPGARFPLEMARDADVGSNSLLTYQLTGNPSFSLFMQDKPGGSKQPELVLERGLDREKQSSFELVLTAVDGGDPARSGTVQVRVNVTDANDNPPVFSKRLYEARVAENLPVETVVLRVRATDADAGSNGRVSYSFGSVPDAVRVLFAIDSETGEIRTAGPLDFEEKNKYIFSVEGRDGGGLTDHCEVQIDITDENDNAPEITILSLSSPVPEDAPVGTVVALLKVRDRDSGENGQVSCELSGEAPLSIVVSSGGSYKVVTAGALDREQASEHRVTVVARDR
SIO_010081: LOC110483896
subclass of: SO_0000673
so part of: LOC110483896
location: join(2245343..2245378,2246461..2246706,2251790..>2252749)
location: region:2245343-2252749:1
so has part: feature:2245343-2245378:1:exon
so has part: feature:2246461-2246706:1:exon
so has part: feature:2251790-2252749:1:exon

XP_021409802.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2245343-2245378:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2246461-2246706:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2251790-2252749:1:exon

LOC110483894
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110483894
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2255100..2268639
location: region:2255100-2268639:1
so has part: feature:2255100-2268639:1:exon

110483894
type: Gene
SIO_000068: ncbigene

position:2255100:1
position: 2255100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2268639:1
position: 2268639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2255100-2268639:1:exon

LOC110483894
type: Exon
subclass of: SO_0000147
RO_0002162: 299123
gene: LOC110483894
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 89 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110483894
subclass of: SO_0000673
so part of: LOC110483894
location: 2255100..2257095
location: region:2255100-2257095:1
so has part: feature:2255100-2257095:1:exon

position:2257095:1
position: 2257095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2255100-2257095:1:exon

LOC110483894
type: Exon
subclass of: SO_0000147
RO_0002162: 299123
gene: LOC110483894
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 89 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110483894
subclass of: SO_0000673
so part of: LOC110483894
location: 2265038..2266504
location: region:2265038-2266504:1
so has part: feature:2265038-2266504:1:exon

position:2265038:1
position: 2265038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2266504:1
position: 2266504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2265038-2266504:1:exon

LOC110483894
type: Exon
subclass of: SO_0000147
RO_0002162: 299123
gene: LOC110483894
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 89 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110483894
subclass of: SO_0000673
so part of: LOC110483894
location: 2267280..2267471
location: region:2267280-2267471:1
so has part: feature:2267280-2267471:1:exon

position:2267280:1
position: 2267280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2267471:1
position: 2267471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2267280-2267471:1:exon

LOC110483894
type: Exon
subclass of: SO_0000147
RO_0002162: 299123
gene: LOC110483894
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 89 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110483894
subclass of: SO_0000673
so part of: LOC110483894
location: 2268628..2268639
location: region:2268628-2268639:1
so has part: feature:2268628-2268639:1:exon

position:2268628:1
position: 2268628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2268628-2268639:1:exon

LOC110483893
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110483893
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2269121..2280415
location: region:2269121-2280415:1
so has part: feature:2269121-2280415:1:exon
subclass of: SO_0000010

110483893
type: Gene
SIO_000068: ncbigene

position:2269121:1
position: 2269121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2280415:1
position: 2280415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2269121-2280415:1:exon

LOC110483893
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110483893
product: protocadherin gamma-A7-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021554123.2
SIO_010081: LOC110483893
subclass of: SO_0000673
so part of: LOC110483893
location: join(2269121..2270712,2280332..2280415)
location: region:2269121-2280415:1
so has part: feature:2269121-2270712:1:exon
so has part: feature:2280332-2280415:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2269121-2270712:1:exon

position:2270712:1
position: 2270712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2280332-2280415:1:exon

position:2280332:1
position: 2280332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110483893
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110483893
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-A7-like
translation: MCAAGRRWGRRQRALLWAVLLAAWEAAWGQLRYSVPEEMPKGSFVGDVARDLGLQLPEIRARGVHILDKGRTQYFALHGKTGHLVTAERIDREQLCERVQQCVLRCELIVEGQMQVYGIQVEITDINDNAPSFREAETAVKMIETTVPGARFPLPDAHDLDLGSNSLQSYELSGDEHFSLAVQAGPGGDQRPELVLAKALDREEAAFHELVLRAMDGGDPARTGTARIRVTVLDANDNAPVFSQAEYTVRVPEDVPVGSVLVTVTATDADEGLNGHMQYSFKKITEKASQIFQLDLDTGAIALTRNLDFEDVKSYELDIQVRDGGDLSDIAKVMITVTDVNDNAPDLTVSSVLSEISEDAPPGTVVALLHVQDRDSGENGEVRCSLDENVPFHLENAYEDYYSVVTLLRYGDADEATLMSQKQKSKCDSAILA
SIO_010081: LOC110483893
subclass of: SO_0000673
so part of: LOC110483893
location: join(2269495..2270712,2280332..2280415)
location: region:2269495-2280415:1
so has part: feature:2269495-2270712:1:exon
so has part: feature:2280332-2280415:1:exon

XP_021409798.1
type: Protein
SIO_000068: ncbiprotein

position:2269495:1
position: 2269495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2269495-2270712:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2280332-2280415:1:exon

LOC110483892
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110483892
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2281235..2295331
location: region:2281235-2295331:1
so has part: feature:2281235-2295331:1:exon
subclass of: SO_0000010

110483892
type: Gene
SIO_000068: ncbigene

position:2281235:1
position: 2281235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2295331:1
position: 2295331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2281235-2295331:1:exon

LOC110483892
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110483892
product: protocadherin gamma-A5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 Proteins, and 54% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031506056.1
SIO_010081: LOC110483892
subclass of: SO_0000673
so part of: LOC110483892
location: join(2281235..2282375,2284678..2285726,2285916..2286089,2286236..2286298,2293005..2294009,2295044..2295331)
location: region:2281235-2295331:1
so has part: feature:2281235-2282375:1:exon
so has part: feature:2284678-2285726:1:exon
so has part: feature:2285916-2286089:1:exon
so has part: feature:2286236-2286298:1:exon
so has part: feature:2293005-2294009:1:exon
so has part: feature:2295044-2295331:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2281235-2282375:1:exon

position:2282375:1
position: 2282375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2284678-2285726:1:exon

position:2284678:1
position: 2284678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2285726:1
position: 2285726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2285916-2286089:1:exon

position:2285916:1
position: 2285916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2286089:1
position: 2286089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2286236-2286298:1:exon

position:2286236:1
position: 2286236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2286298:1
position: 2286298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2293005-2294009:1:exon

position:2293005:1
position: 2293005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2294009:1
position: 2294009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2295044-2295331:1:exon

position:2295044:1
position: 2295044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110483892
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110483892
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-A5-like
translation: MAVRRRQRRGPGGGRALLAAVLLCVWGRAAAERLRYAIPEELGRGSLVGPLARDLGLSADELPARKLRLSEEKQYFTVSEENGNLYVNERLDREEMCGESATCSVSFEALVHNPLNVFQVEVAIEDLNDNSPAFSKAALELEIGEWILPGARFPLEMAQDADAGRNSLLTYQLTSNPSFSLSMKEKPGGKKQPQLILERVLDREKQSAIELVLTAVDSGEPARSGTVEVHINVTDANDNPPVFSKSLYEARVAETLPVESVVLRVWATDADVGSNGRVSYAFGNIPNVVRALFTLDSETGEIRTAGPLDFEEKNKYIFGLEATDGGGLTDHCEVQIDITDENDNAPEITILSLSSPVPEDAPTGTVVALLKVRDRDSGENEDGNRDQLDKSRSRRSALDEKRRFLCGYVPPTRDVRGQRSAALGACSAGRRLRAPLLTERSERSSERRSPARCGSARSLARSLARSLSVSAAGGLRASPRCGAVLQRGRKAGDSTRERRVERLCWGASLEMCGAGRRWGRRQRALLWAVLLAAWEAAWGQLRYSVPEEMPKGSFVGDVAKDLGLQLLEISDRGVRVVSEGRTHYFALHGKTGHLVTAERIDREQLCRLVDKCVLRCELIVEGQMQVYGIEVEIMDINDNAPSFKEIELEERISEATSPGSRFPLVEAHDPDAGRNSLQSYELSGDEHFSLAVQAGPGGDQRPELVLAKALDREEAAFHELVLRAMDGGDPSYSHEVSLTADSRKSQLRFSAGSCCDTLPARPPPDEPAPLLGDQDPAGALPMDPTAPSCEVEEGSTRCFQIQSECTYIGENGNLYVNERLDREEMCGESATCSVSFEALVHNPLNIFEVEVSIEDVNDNSPTFRKTSLGLEIGEWTLPGARFPLEMARDADVGNNALLTYQLSSNPSFSLSLKENPGGKKHPELVLEGALDREKQSSFEMVLMAVDGGEPARSGTVQILINVTDLNDNPPKFSKSIYEARVAENLPVGSVVLRVWATDADAGSNGRVSYSFGNVPDDVLLLFTVDRDSGEVRTASTLDFEEKSKYIFGLEARDGGGLTGHCEVQIYITDENDNVPEITILSLTNPVPEDAPTGTVMALLKVRDRDSGENGQVSCELSGEAPLSIVASSGGSYKVVTAGALDREQGAQRFSVAGAAFPADFCEGTLPYSYNLCVAAPARAVPEAAWPPPPPPVPVLSAEELLGGDSCEKPSLNSTAVTGEPPADLDAAQVCKANSFLPRH
SIO_010081: LOC110483892
subclass of: SO_0000673
so part of: LOC110483892
location: join(2281235..2282375,2284678..2285726,2285916..2286089,2286236..2286298,2293005..2294009,2295044..2295331)
location: region:2281235-2295331:1
so has part: feature:2281235-2282375:1:exon
so has part: feature:2284678-2285726:1:exon
so has part: feature:2285916-2286089:1:exon
so has part: feature:2286236-2286298:1:exon
so has part: feature:2293005-2294009:1:exon
so has part: feature:2295044-2295331:1:exon

XP_031361916.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2281235-2282375:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2284678-2285726:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2285916-2286089:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2286236-2286298:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2293005-2294009:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2295044-2295331:1:exon

LOC110483985
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110483985
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2296406..2300208
location: region:2296406-2300208:1
so has part: feature:2296406-2300208:1:exon

110483985
type: Gene
SIO_000068: ncbigene

position:2296406:1
position: 2296406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2300208:1
position: 2300208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2296406-2300208:1:exon

LOC110483985
type: Exon
subclass of: SO_0000147
RO_0002162: 299123
gene: LOC110483985
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110483985
subclass of: SO_0000673
so part of: LOC110483985
location: 2296406..2298355
location: region:2296406-2298355:1
so has part: feature:2296406-2298355:1:exon

position:2298355:1
position: 2298355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2296406-2298355:1:exon

LOC110483985
type: Exon
subclass of: SO_0000147
RO_0002162: 299123
gene: LOC110483985
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110483985
subclass of: SO_0000673
so part of: LOC110483985
location: 2299131..2299236
location: region:2299131-2299236:1
so has part: feature:2299131-2299236:1:exon

position:2299131:1
position: 2299131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2299236:1
position: 2299236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2299131-2299236:1:exon

LOC110483985
type: Exon
subclass of: SO_0000147
RO_0002162: 299123
gene: LOC110483985
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110483985
subclass of: SO_0000673
so part of: LOC110483985
location: 2300161..2300208
location: region:2300161-2300208:1
so has part: feature:2300161-2300208:1:exon

position:2300161:1
position: 2300161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2300161-2300208:1:exon

LOC110483986
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110483986
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2304145..2308885
location: region:2304145-2308885:1
so has part: feature:2304145-2308885:1:exon
subclass of: SO_0000010

110483986
type: Gene
SIO_000068: ncbigene

position:2304145:1
position: 2304145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2308885:1
position: 2308885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2304145-2308885:1:exon

LOC110483986
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110483986
product: protocadherin gamma-B3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031506057.1
SIO_010081: LOC110483986
subclass of: SO_0000673
so part of: LOC110483986
location: join(2304145..2304216,2305771..2306820,2308721..2308885)
location: region:2304145-2308885:1
so has part: feature:2304145-2304216:1:exon
so has part: feature:2305771-2306820:1:exon
so has part: feature:2308721-2308885:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2304145-2304216:1:exon

position:2304216:1
position: 2304216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2305771-2306820:1:exon

position:2305771:1
position: 2305771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2306820:1
position: 2306820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2308721-2308885:1:exon

position:2308721:1
position: 2308721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110483986
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110483986
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-B3
translation: MKYWTCLPREAVELPSQDVLKKDWQYFTVSEENGNLYVNERLDREEMCGESATCSVSFEVLVNNPLNIFHVEVAIEDVNDNSPSFSKAALDLEISEWTLPGARFPLEMARDADVGSNSLLTYQLTGIPLFSLFMQDKPGGSKQPELVLERGLDREKQSSFELVLTAVDGGDPARSGTVQVRINVTDANDNPPVFSKRLYEARVAENLPVETVVLRVRATDADAGSNGRVSYTFGSIPDAVRALFAIDSDSGKIRTAGPLDFEEKNKYIFSVEARDGGGLTDHCEVQIDITDENDNAPEITILSLSSPVPEDAPVGTVVALLKVRDRDSGENGQVSCELSGEAPLSIVASSGGSYKVVTAGALDREQASEHRVTVMWIGNEHGKVISPSRVKKEIVARFGGEYISGTNLLRLCILASRSLSLLFKIYIS
SIO_010081: LOC110483986
subclass of: SO_0000673
so part of: LOC110483986
location: join(2304145..2304216,2305771..2306820,2308721..2308885)
location: region:2304145-2308885:1
so has part: feature:2304145-2304216:1:exon
so has part: feature:2305771-2306820:1:exon
so has part: feature:2308721-2308885:1:exon

XP_031361917.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2304145-2304216:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2305771-2306820:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2308721-2308885:1:exon

LOC110483667
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110483667
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2318663..2320596)
location: region:2318663-2320596:-1
so has part: feature:2318663-2320596:-1:exon
subclass of: SO_0000010

110483667
type: Gene
SIO_000068: ncbigene

position:2318663:-1
position: 2318663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2320596:-1
position: 2320596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2318663-2320596:-1:exon

LOC110483667
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110483667
product: protocadherin gamma-A7-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 68% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031506058.1
SIO_010081: LOC110483667
subclass of: SO_0000673
so part of: LOC110483667
location: complement(join(2318663..2319009,2319121..2320596))
location: region:2318663-2320596:-1
so has part: feature:2319121-2320596:-1:exon
so has part: feature:2318663-2319009:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2319121-2320596:-1:exon

position:2319121:-1
position: 2319121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2318663-2319009:-1:exon

position:2319009:-1
position: 2319009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110483667
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110483667
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-A7-like
translation: MCWAGRRWGRRQRALLWAVLLAAWEAAWGQLRYSVPEEMPKGSFVGDVAKDLGLQLPDIRDNAVRVVSMGRTQYFAVHGKTGHLVTAERIDREQVCERVQQCVLRCEVILEGEMNFYQIEVEITDVNDNDPSFREAEKELRVNEMTAPGSRFPLREARDPDAGRNSLQSYELSGDEHFSLAVQAGPGGDQRPELVLAKALDREEAAFHELVLRAMDGGDPARTGTARIRVTVLDANDNAPVFSQAEYTVRVPEDVPVGSVLVTVTATDADEGLNGKVKYSLHKISDRASELFNLDSETGEITVEDVLDFEEISSHELEVQAHDGGELFDTAKVTISVTDVNDHVPELTVSSVVSAISEDAKPGTVVALLHIQDRDSGANGDVRCSLHGDVPFRLEKSYDDYYRVVTARELDREQVSEYNVTVRAADGGSPALQSRFRAAGTITDRSAAEVGMKRASDRADPQRAGLRRSELLSLLSVSSGARSLLPALQAPSAAERRGPAFLTGCSRRRDIRHGDVDPVSAFLLDSQLIITGKNIEFPCGFSFFTARE
SIO_010081: LOC110483667
subclass of: SO_0000673
so part of: LOC110483667
location: complement(join(2318663..2319009,2319121..2320420))
location: region:2318663-2320420:-1
so has part: feature:2319121-2320420:-1:exon
so has part: feature:2318663-2319009:-1:exon

XP_031361918.1
type: Protein
SIO_000068: ncbiprotein

position:2320420:-1
position: 2320420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2319121-2320420:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2318663-2319009:-1:exon

LOC116184136
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116184136
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2320466..2373009)
location: region:2320466-2373009:-1
so has part: feature:2320466-2373009:-1:exon
subclass of: SO_0000010

116184136
type: Gene
SIO_000068: ncbigene

position:2320466:-1
position: 2320466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2373009:-1
position: 2373009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2320466-2373009:-1:exon

LOC116184136
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC116184136
product: protocadherin-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 52 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031506059.1
SIO_010081: LOC116184136
subclass of: SO_0000673
so part of: LOC116184136
location: complement(join(2320466..2320700,2320764..2320900,2322877..2323125,2342757..2344025,2344331..2344552,2352890..2353150,2358710..2359733,2372729..2373009))
location: region:2320466-2373009:-1
so has part: feature:2372729-2373009:-1:exon
so has part: feature:2358710-2359733:-1:exon
so has part: feature:2352890-2353150:-1:exon
so has part: feature:2344331-2344552:-1:exon
so has part: feature:2342757-2344025:-1:exon
so has part: feature:2322877-2323125:-1:exon
so has part: feature:2320764-2320900:-1:exon
so has part: feature:2320466-2320700:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2372729-2373009:-1:exon

position:2372729:-1
position: 2372729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2358710-2359733:-1:exon

position:2358710:-1
position: 2358710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2359733:-1
position: 2359733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2352890-2353150:-1:exon

position:2352890:-1
position: 2352890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2353150:-1
position: 2353150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2344331-2344552:-1:exon

position:2344331:-1
position: 2344331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2344552:-1
position: 2344552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2342757-2344025:-1:exon

position:2342757:-1
position: 2342757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2344025:-1
position: 2344025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2322877-2323125:-1:exon

position:2322877:-1
position: 2322877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2323125:-1
position: 2323125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2320764-2320900:-1:exon

position:2320764:-1
position: 2320764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2320900:-1
position: 2320900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2320466-2320700:-1:exon

position:2320700:-1
position: 2320700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116184136
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC116184136
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-1-like
translation: MAVRRRQRRGPGGGRALLAAVLLCVWGRAAAERLRYAIPEELGRGSLVGPLARDLGLSADELPARKLQVASAGKKQLQYFTVSEENGNLYVNERLDREEMCGESATCSVSFEVLVHNPLNIFHVEVVIADVNDNTPRFLQDSFQLEINELTSPGARFYLGMAEDPDTGSNSLQGYELEPNGYFTVEVKESQDGSKSAELVLRRSLDRESEPSLRLLLTALDGGDPPRTGTAELWINVTDANDNPPVFAQDRYRVSLREDTPPGSIVVNISASDADAGTNAHITYGFGKMPTKVLQKFVVDAQRGTITLQEALDFEDTRMFSLTAEATDGGGLVAHSKVEVEVLDVNDNRPEITILSLSSPVPEDAPVGTVVALLNVNDLDSGENGQVSCELSGEAPLSIVASSGGSYKVVTAGALDREQASEHRVTVVARDRGRPQLLPADSGALRGVPVSHFVGIDGVRAFLQSYSHEVSLTADSRKSQLRFSAGSCCDTLPARPPPDEPAPLLGDHDPAGARPVDSASVPELQRCLSAVAAEPGPGAAAEPRPSRAPLSAAVRRLQWRGGASGCRCWPPPSGAGAAAAAAAASCPRRLLARPAPRLRYAIPEELGRGSLVGPLARDLGLSADELPARKLQVASAGKKQLQYFTVSEENGNLYVNERLDREEMCGESATCSVSFEVLVHNPLNVFHIEVAIEDVNDNTPVFSNAALELEIGEWTLSGARFPLEMARDADLGSNSLLTYQLTSDPSFSLSVKDKPGGKKQPELVLERALDREKQSSFELVLTAVDGGEPVRSGTVLVRINVTDANDNPPVFSKSVYEERVAENLPVGSSVLRVRATDVDLGANGRVSYSFSNVPDEVLSLFAIESESGEIKTVGPLDFEEKKKYVFGLEAMDGGGLTDHCEVQIDITDENDNTPEITILSLSSPVPEDALVGTVVAVLNVNDPDSGENGQVSCELSGEAPLSIVASSGGSYKVVTAGALDREQASEHRVTVVARDRGRPALWSSAELVLEVSDVNDNAPRFSVAGAAFPADFCEGTLPYSYNLCVAAPARAVPEAAWPPPPVPVLSAEELLSGEPLEKHISSRNTAEGEMPLNPDAPQLCKSIQSAQSDEVTYSCIPETVFFRCPCAGHSIMFSTNICDESSAFVLLRAGRRLRAPLLTERSERSSERRSPARCGPARSLSRCVSRRRNSLRSFPRCGDVLKGVGRAWQKRSGAKRRSCTVKPDR
SIO_010081: LOC116184136
subclass of: SO_0000673
so part of: LOC116184136
location: complement(join(2320466..2320700,2320764..2320900,2322877..2323125,2342757..2344025,2344331..2344552,2352890..2353150,2358710..2359733,2372729..2373009))
location: region:2320466-2373009:-1
so has part: feature:2372729-2373009:-1:exon
so has part: feature:2358710-2359733:-1:exon
so has part: feature:2352890-2353150:-1:exon
so has part: feature:2344331-2344552:-1:exon
so has part: feature:2342757-2344025:-1:exon
so has part: feature:2322877-2323125:-1:exon
so has part: feature:2320764-2320900:-1:exon
so has part: feature:2320466-2320700:-1:exon

XP_031361919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2372729-2373009:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2358710-2359733:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2352890-2353150:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2344331-2344552:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2342757-2344025:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2322877-2323125:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2320764-2320900:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2320466-2320700:-1:exon

LOC116184134
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116184134
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2365635..2368614)
location: region:2365635-2368614:-1
so has part: feature:2365635-2368614:-1:exon
subclass of: SO_0000010

116184134
type: Gene
SIO_000068: ncbigene

position:2365635:-1
position: 2365635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2368614:-1
position: 2368614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2365635-2368614:-1:exon

LOC116184134
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC116184134
product: protocadherin gamma-A10-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 51 Proteins, and 77% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031506051.1
SIO_010081: LOC116184134
subclass of: SO_0000673
so part of: LOC116184134
location: complement(join(2365635..2365712,2365859..2365990,2366743..2368614))
location: region:2365635-2368614:-1
so has part: feature:2366743-2368614:-1:exon
so has part: feature:2365859-2365990:-1:exon
so has part: feature:2365635-2365712:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2366743-2368614:-1:exon

position:2366743:-1
position: 2366743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2365859-2365990:-1:exon

position:2365859:-1
position: 2365859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2365990:-1
position: 2365990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2365635-2365712:-1:exon

position:2365712:-1
position: 2365712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116184134
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC116184134
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-A10-like
translation: MCAAGRRWGRRQRALLWAVLLAAWEAAWGQLRYSVPEEMPKGSFVGDVAKDLGLQLPEISDRGIRVVSEGRTQYFSLQKKTGHLVTAQKIDREQLCQRVQKCVLRCELIVERQMKVYEIEVEITDINDNAPNFKEAETELRMSETTTPGARFPLTKAHDPDTARNSLQSYELSGDEHFSLAVQAGPGGDQRPELVLAKALDREEAAFHELVLRAMDGGDPARTGTARIRVTVLDANDNAPVFSQAEYTVRVPEDVPVGSVLVTVTATDDDDGLYGLVKYSMKKATDMQSDIFHLDTETGALKLSRILDFEEGVSYELEVQAHDSGALFDTAKVTITVTDVNDNAPEISVSSKLKEIPEDAPPETVVALLRVQDRDSGANGDVRCLLQGDVPFRLEKSYDDYYRVVTARELDREQVSEYNVTVRAADGGSPALQSSAVLALRVLDVNDNAPVFAEERYSARLAENNAAGALVLRVRATDADWGQNARVRYRLAEGRVRGAPLSSFVSVQAETGALYALRSFDYEQLRELQLWVRAEDGGAPALGSNVSSQLRFSAGSCCDTLPARPPPDEPAPLLGDQDPASALPMDPTAPSCEVEEGSTRWFQIQSERTYIGVDVG
SIO_010081: LOC116184134
subclass of: SO_0000673
so part of: LOC116184134
location: complement(join(2365635..2365712,2365859..2365990,2366743..2368383))
location: region:2365635-2368383:-1
so has part: feature:2366743-2368383:-1:exon
so has part: feature:2365859-2365990:-1:exon
so has part: feature:2365635-2365712:-1:exon

XP_031361911.1
type: Protein
SIO_000068: ncbiprotein

position:2368383:-1
position: 2368383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2366743-2368383:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2365859-2365990:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2365635-2365712:-1:exon

LOC116184137
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116184137
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2376229..2385056)
location: region:2376229-2385056:-1
so has part: feature:2376229-2385056:-1:exon
subclass of: SO_0000010

116184137
type: Gene
SIO_000068: ncbigene

position:2376229:-1
position: 2376229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2385056:-1
position: 2385056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2376229-2385056:-1:exon

LOC116184137
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC116184137
product: protocadherin gamma-A10-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031506060.1
SIO_010081: LOC116184137
subclass of: SO_0000673
so part of: LOC116184137
location: complement(join(2376229..2376282,2383720..2385056))
location: region:2376229-2385056:-1
so has part: feature:2383720-2385056:-1:exon
so has part: feature:2376229-2376282:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2383720-2385056:-1:exon

position:2383720:-1
position: 2383720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2376229-2376282:-1:exon

position:2376282:-1
position: 2376282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116184137
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC116184137
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-A10-like
translation: MCGAGRRWGRRQRALLWAVLLAAWEAAWGQLRYSVPEEMPKGSFVGDVAKDLGLPVPTLRDRGVYIMDKGRTQYFCVHGKTGHLVTAERIDREQLCENVQQCVLRCELIVEGQMQVYGIEVEIMDINDNAPSFLEAETELRLSEMTAPGSQFPLTEAHDPDLGRNSLQSYELSGDEHFSLAVQAGPGGDQRPELVLAKALDREEAAFHELLLRAMDGGDPARTGTARIRVTVLDANDNAPVFSQAEYTVRVPEDVPVGSVLVTVTASDADEGSNGHVKYVFKKITKKVLQIFQVDAEFGAITLLRSLDFEEGNSYELEVQALDSGALSDTAKVVVTVTDVNDNAPELTVSSALSEISEDAPSGTVVALLHVEDRDSGANGEVRCSLDGGVPFRLEKSYEDYYRVVTARELDREQVSVYNVTVRAADGGSPALQSSAVLALRVLDIYLEKEADEKLFEMMVS
SIO_010081: LOC116184137
subclass of: SO_0000673
so part of: LOC116184137
location: complement(join(2376229..2376282,2383720..2385051))
location: region:2376229-2385051:-1
so has part: feature:2383720-2385051:-1:exon
so has part: feature:2376229-2376282:-1:exon

XP_031361920.1
type: Protein
SIO_000068: ncbiprotein

position:2385051:-1
position: 2385051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2383720-2385051:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2376229-2376282:-1:exon

LOC110483212
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110483212
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2386904..2422232)
location: region:2386904-2422232:-1
so has part: feature:2386904-2422232:-1:exon
subclass of: SO_0000010

110483212
type: Gene
SIO_000068: ncbigene

position:2386904:-1
position: 2386904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2422232:-1
position: 2422232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2386904-2422232:-1:exon

LOC110483212
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110483212
product: protocadherin gamma-B3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031506061.1
SIO_010081: LOC110483212
subclass of: SO_0000673
so part of: LOC110483212
location: complement(join(2386904..2386918,2388043..2389343,2421724..2422232))
location: region:2386904-2422232:-1
so has part: feature:2421724-2422232:-1:exon
so has part: feature:2388043-2389343:-1:exon
so has part: feature:2386904-2386918:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2421724-2422232:-1:exon

position:2421724:-1
position: 2421724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2388043-2389343:-1:exon

position:2388043:-1
position: 2388043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2389343:-1
position: 2389343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2386904-2386918:-1:exon

position:2386918:-1
position: 2386918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110483212
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110483212
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-B3
translation: MQDRTFALFFFLHAAVFRHGLRVSLLAKAEKLLRRRLLPGARVLLLRTAQSREKSRNRSTQPVLRSATGISYIYFSRILVQLLGKANFYPSTEYPSGRKGMEVRSAAQGRAGAGRVALLAAVLLCVWGRAAAERLRYAIPEELGRGSLVGPLARDLGLSADELPARKLQVASAGKKQLQYFTVSEENGNLYVNERLDREEMCGASPTCSVSFEVMVKNPLNVFHVEVSIEDVNDNTPVFSNAALDLEIGELIPPGARFPLEMARDADLGSNSLLTYQLTSDPSFSLSVKEKAGGKKQPELVLERALDREKLSSFELVLTAVDGGDPARSGTVLVRINVTDANDNPPVFSKSVYEARVAENLPVGSSVLRVQATDADLGSNGQVSYSFSNVPEEVLSLFSIESESGEIRTVGPLDFEEEKKYVFGVETTDGGGLTDHCEVQIDITDENDNTPKITILSLSSPVPEDAPVGTVVALLNVNDPDSGENGQVSCELSGEAPLSIVASLGGSYKVVTAGALDREQASEHRVTVVARDRGRPALWSSTELVLEVSDVNDNAPVFEEAAYSAYVAENNAAGALVLRVQARDADAGANGRVSYWLAGGSVFSV
SIO_010081: LOC110483212
subclass of: SO_0000673
so part of: LOC110483212
location: complement(join(2386904..2386918,2388043..2389343,2421724..2422225))
location: region:2386904-2422225:-1
so has part: feature:2421724-2422225:-1:exon
so has part: feature:2388043-2389343:-1:exon
so has part: feature:2386904-2386918:-1:exon

XP_031361921.1
type: Protein
SIO_000068: ncbiprotein

position:2422225:-1
position: 2422225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2421724-2422225:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2388043-2389343:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2386904-2386918:-1:exon

LOC110483211
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110483211
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2393685..2404559)
location: region:2393685-2404559:-1
so has part: feature:2393685-2404559:-1:exon
subclass of: SO_0000010

110483211
type: Gene
SIO_000068: ncbigene

position:2393685:-1
position: 2393685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2404559:-1
position: 2404559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2393685-2404559:-1:exon

LOC110483211
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110483211
product: protocadherin gamma-A10-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021552910.2
SIO_010081: LOC110483211
subclass of: SO_0000673
so part of: LOC110483211
location: complement(join(2393685..2393720,2394676..2394781,2395613..2396647,2404147..2404559))
location: region:2393685-2404559:-1
so has part: feature:2404147-2404559:-1:exon
so has part: feature:2395613-2396647:-1:exon
so has part: feature:2394676-2394781:-1:exon
so has part: feature:2393685-2393720:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2404147-2404559:-1:exon

position:2404147:-1
position: 2404147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2395613-2396647:-1:exon

position:2395613:-1
position: 2395613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2396647:-1
position: 2396647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2394676-2394781:-1:exon

position:2394676:-1
position: 2394676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2394781:-1
position: 2394781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2393685-2393720:-1:exon

position:2393720:-1
position: 2393720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110483211
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110483211
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-A10-like
translation: MLMAAWEAAWGQLRYSVPEEMLKGSFVGDVAKDLGLQLLELNDRGVRIRNKGRTQYFAVHGKTGHLVTAERIDREQLCRLVEKCVLRCELIVEGQMQVYGIEVEITDINDNAPSFREAEKELRLSETTALGSRFPLREARDPDAGRNSLQSYELSGDEHFSLAVQAGPSDDQRPELVLAKALDREEAVFHELVLRAMDGGDPARTGTARIRVTVLDANDNAPVFSQAEYTVRVPEDVPVGSVLVTVTATDADEGLNGKVKYSLHKISDQASQLFHLDSDSGEITVKDNLDFEEMPSHELEVQAHDGGDLSDTAKMVITVIDVNDNVPKISVRSALNEISEDAPPETVVALLHVQDGDSGANGDVRCSLDKDVPFRLEKSYDDYYRVVTARELDREQVSEYNVTVRAADGGSPALQSSAVLALRVLDVNDNAPVFAEERYSARLAENNAAGALVLRVRATDADWGQNARVRYRLAEGRVCCDTLPARPPPDEPAPLLGDHDPAGRSPVDPSALPVFSSCLYPLMV
SIO_010081: LOC110483211
subclass of: SO_0000673
so part of: LOC110483211
location: complement(join(2393685..2393720,2394676..2394781,2395613..2396647,2404147..2404544))
location: region:2393685-2404544:-1
so has part: feature:2404147-2404544:-1:exon
so has part: feature:2395613-2396647:-1:exon
so has part: feature:2394676-2394781:-1:exon
so has part: feature:2393685-2393720:-1:exon

XP_021408585.2
type: Protein
SIO_000068: ncbiprotein

position:2404544:-1
position: 2404544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2404147-2404544:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2395613-2396647:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2394676-2394781:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2393685-2393720:-1:exon

LOC110483213
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110483213
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2423007..2427111)
location: region:2423007-2427111:-1
so has part: feature:2423007-2427111:-1:exon
subclass of: SO_0000010

110483213
type: Gene
SIO_000068: ncbigene

position:2423007:-1
position: 2423007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2427111:-1
position: 2427111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2423007-2427111:-1:exon

LOC110483213
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110483213
product: protocadherin gamma-A10
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 33% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031506062.1
SIO_010081: LOC110483213
subclass of: SO_0000673
so part of: LOC110483213
location: complement(join(2423007..2423015,2424205..2424462,2425600..2427111))
location: region:2423007-2427111:-1
so has part: feature:2425600-2427111:-1:exon
so has part: feature:2424205-2424462:-1:exon
so has part: feature:2423007-2423015:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2425600-2427111:-1:exon

position:2425600:-1
position: 2425600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2424205-2424462:-1:exon

position:2424205:-1
position: 2424205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2424462:-1
position: 2424462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2423007-2423015:-1:exon

position:2423015:-1
position: 2423015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110483213
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110483213
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(2426788..2426790),aa:OTHER)
product: LOW QUALITY PROTEIN: protocadherin gamma-A10
translation: MGWGKAEAGGPLWTGSDISVALRCPRELSVGEAALGACSAGRRLRAPLLTERSEXELGAPQPRPLRTESLARCLSDSAHAGLDRPRSADRPRSAAPXGGGASGSGRERXAGEEIREIRAGAGCRSAVGRAHCSLCCGAAAEMCAAGRRWGRRQRALLWAVLLAAWEAAWGQLRYSVPEEMPKGSFVGDVAKDLGLQLPALKDRDAHVFDTGRTRYFFLDLRNGHLSMMEQVDREEICAAVAKCVLSFDILVKRPMNIYKGEVEILDINDNPPSFPEGRSVLEISENTAPGARFPLERAHDPDIGVNSLQNYECSRSSYFTLEVKTGDDGVKYPELLLVKSLDREQKAAHNLILTATDNGSPVKSGSTTIEIIVLDGNDNAPEFTQSVYKVTVREDVAVGSRVLQVTATDRDEGPNAEVKYSFFKIPEKFDKTFKMDPESGEIVITENLNFEEHEFYELVVQARDVGGLSSHSKVLIKVVDVNNYVPEIVIMSVFTPVPEDTPLGTQLLPADSGALRGVPVSHFVGIDGVRAFLQSYSHEVSLTADSRKSQLRFSAGSCCDTLPARPPDEASADLVPSGDQDSENGGQVAFQGL
SIO_010081: LOC110483213
subclass of: SO_0000673
so part of: LOC110483213
location: complement(join(2423007..2423015,2424205..2424462,2425600..2427111))
location: region:2423007-2427111:-1
so has part: feature:2425600-2427111:-1:exon
so has part: feature:2424205-2424462:-1:exon
so has part: feature:2423007-2423015:-1:exon

XP_031361922.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2425600-2427111:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2424205-2424462:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2423007-2423015:-1:exon

LOC116184138
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116184138
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2429458..>2450804)
location: region:2429458-2450804:-1
so has part: feature:2429458-2450804:-1:exon
subclass of: SO_0000010

116184138
type: Gene
SIO_000068: ncbigene

position:2429458:-1
position: 2429458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2450804:-1
position: 2450804
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2429458-2450804:-1:exon

LOC116184138
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC116184138
product: protocadherin beta-15-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 35 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031506063.1
SIO_010081: LOC116184138
subclass of: SO_0000673
so part of: LOC116184138
location: complement(join(2429458..2430972,2439697..2439909,2449705..>2450804))
location: region:2429458-2450804:-1
so has part: feature:2449705-2450804:-1:exon
so has part: feature:2439697-2439909:-1:exon
so has part: feature:2429458-2430972:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2449705-2450804:-1:exon

position:2449705:-1
position: 2449705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2439697-2439909:-1:exon

position:2439697:-1
position: 2439697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2439909:-1
position: 2439909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2429458-2430972:-1:exon

position:2430972:-1
position: 2430972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116184138
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC116184138
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-15-like
translation: VSEDGRQHFRLERASGRLVVAGRLDREELCGQAATCMLPFELLLSNPLQFFRVEVTLDDINDHSPVFPEERVTYKIVERSDPGSRFPLVGARDPDIGSNTVQEYSISPENEYFRLSYGSRTNDDKYLEIVLENPLDREEHAEMGFSVIAVDGGSPPRSGSIEISIIILDVNDNAPIFMQERYIGRVMENMPAGSVVLTVLATDQDAGVNGDIFYELSQSVVQADSAFVIDPITGEIKLTKPLDFEAAQYHDLIVRATDGGGLSAICKVLVEVVDVNDNAPELVLSSFSSPLPEDTVPGTVVALFSVRDRDSGANGKISCALEDQLSFSLRPAYKNYYELVTVSALDREETPQYILSVTAADAGSPPLAEGSGCVSLGAAPGGGGGKLGLKTMRSLLAAPSATHRLRLWRCEYDQLPTSLAHTSVVGPGPESTAARGAHVQSGLADAAAAGTLPRAYCYEISLTTGSGNSEFKFLRPILPSLPPQHCALGQGPAEEQDFPCVPVSTEDMAPDNAGTLSAGQLNALSFD
SIO_010081: LOC116184138
subclass of: SO_0000673
so part of: LOC116184138
location: complement(join(2430702..2430972,2439697..2439909,2449705..>2450804))
location: region:2430702-2450804:-1
so has part: feature:2449705-2450804:-1:exon
so has part: feature:2439697-2439909:-1:exon
so has part: feature:2430702-2430972:-1:exon

XP_031361923.1
type: Protein
SIO_000068: ncbiprotein

position:2430702:-1
position: 2430702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2449705-2450804:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2439697-2439909:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2430702-2430972:-1:exon

LOC110471350
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110471350
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2452012..2454637)
location: region:2452012-2454637:-1
so has part: feature:2452012-2454637:-1:exon
subclass of: SO_0000010

110471350
type: Gene
SIO_000068: ncbigene

position:2452012:-1
position: 2452012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2454637:-1
position: 2454637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2452012-2454637:-1:exon

LOC110471350
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110471350
product: protocadherin beta-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 47 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021531915.1
SIO_010081: LOC110471350
subclass of: SO_0000673
so part of: LOC110471350
location: complement(join(2452012..2452599,2453024..2454637))
location: region:2452012-2454637:-1
so has part: feature:2453024-2454637:-1:exon
so has part: feature:2452012-2452599:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2453024-2454637:-1:exon

position:2453024:-1
position: 2453024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2452012-2452599:-1:exon

position:2452599:-1
position: 2452599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110471350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110471350
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-2-like
translation: MKPRKSKEPLMGRAAALILVLCVSGITAETARYSVPEEAGRGSFVANIAKDLGLTSEELLARQARVVPEGEKQYLQLNQHTGDLVVREQMDREEMCGQSEPCLVRFEVLLESPLQSFRAEVRLTDINDHAPAFLNKEIVLKIPESAMPGTRVLLESAHDPDVGNNSLQHYSISSNEYFHVYTQRRSDGGRYAELVLDRALDREQQAEVAFIITAVDGGNPPRSGTALIRVIVLDTNDNIPVFTQTLYKVSVMENSSQDTIVMVVSASDLDAGTNGEIVYSIFQNSEENLQTFKINPETGQIRLKKTLDYEEKKTYEIDVQATDGGGLSTHCKVEVQVKDVNDNAPEVIITSLTSTLSEAAPPNTVVALFNVRDPDSGDNGRTTCELTGEQPFRITLLAADAYALVTSETLDREQVEEYNVTVRARDEGSPTLSASKTLFVRLLDVNDNAPTFTQAIYTMVISENEPAGRSLGHLSATDPDAGENAHVRYSLVPPPPGTLAAASFVSVDAESGTVRKRDAPRQRLIVLVRDRGHPSRSATATLAVALVDDFSDAFHQLGHDPASRQQPQIAEEEMLTTYLITSLCCVSSLFLLSVLVLTANTLCKARVRAELPPPSPSCYADGDFASDGVGAGSTGTLSPAYRYEMCLTSGSGRSEFRFLRPILPSLHSNAEAGQDKDEELLRHSQPPCDREAQTRSKATPPF
SIO_010081: LOC110471350
subclass of: SO_0000673
so part of: LOC110471350
location: complement(join(2452037..2452599,2453024..2454569))
location: region:2452037-2454569:-1
so has part: feature:2453024-2454569:-1:exon
so has part: feature:2452037-2452599:-1:exon

XP_021387590.1
type: Protein
SIO_000068: ncbiprotein

position:2452037:-1
position: 2452037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2454569:-1
position: 2454569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2453024-2454569:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2452037-2452599:-1:exon

LOC110471328
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110471328
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2455403..2460630)
location: region:2455403-2460630:-1
so has part: feature:2455403-2460630:-1:exon
subclass of: SO_0000010

110471328
type: Gene
SIO_000068: ncbigene

position:2455403:-1
position: 2455403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2460630:-1
position: 2460630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2455403-2460630:-1:exon

LOC110471328
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110471328
product: protocadherin beta-16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 194 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021531891.2
SIO_010081: LOC110471328
subclass of: SO_0000673
so part of: LOC110471328
location: complement(join(2455403..2456359,2458094..2460630))
location: region:2455403-2460630:-1
so has part: feature:2458094-2460630:-1:exon
so has part: feature:2455403-2456359:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2458094-2460630:-1:exon

position:2458094:-1
position: 2458094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2455403-2456359:-1:exon

position:2456359:-1
position: 2456359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110471328
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110471328
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-16
translation: MLGATEDGGRLLWRVMTYGRRNGGRKRQVILFILYVCVCQSGAETLRYSLPEEMERDSFVANIAKDLGVPLSQLAARKARVVSEGNEQLFRLNQNTGVLTAKESLDREEICPQSDTCTLIFKIFFENPLQLIRGEVEVRDINDNSPVFPEKEMVLKILETASPGSRFPLESAQDKDVGINGLQNYSLGPNPHFSLAIGTAKDGVKYLELVLQRQLDREEQTELKLLLTATDGGSPPRSGTAQVRIVVLDANDNIPVFERETYEVRLAENSPLEQLVVRVAAADPDEGSNGEVRYAFTQTSERSRQLFQLNPTTGEIRVAGNLDFEETKSHKMVVKATDGAELSGHCKVQVEVLDVNDNAPEIALTSLSASIPEDAPPRTVVALFSVRDRDSGDNGRTECSIDGDLPFSLTPTFDNYYELRTNAALDRERTAEYNITITATDWGRKRLSSQETIFVQISDVNDNPPEFTQQVYTMSVTENNSPMIRIGSMKATDADAGINARVNYALVRQEGREQPEVSVNAENGDVYILRPLDYEKVRAFEVTVRAADGGSPPLSAQAVLHIAVRDENDNAPVLLHPAPDSSAAGELVPRWAPAGYLVAKVVAVDADAGQNAWLSYELAKATEPALFRVGLHSGEVRTARAVTERDAPRQRLIVLVRDRGHPSRSATATLAVTLVDGFSEAHLRVSEEAPAAEPDGPLTLYLIASLVCVSALFLATAAAAVVVKVRRARRSETENLPTFPTTATESSAGSLPRSYVYDVCFAAGTVNSEFRFLRPLFPCFPAGLPPGPAEQRSSVCSQDAANFGGEGDWTAQGSAPLSEDTRPRAADAVCPANRELDLNASSEQNPWLTQQ
SIO_010081: LOC110471328
subclass of: SO_0000673
so part of: LOC110471328
location: complement(join(2456240..2456359,2458094..2460529))
location: region:2456240-2460529:-1
so has part: feature:2458094-2460529:-1:exon
so has part: feature:2456240-2456359:-1:exon

XP_021387566.2
type: Protein
SIO_000068: ncbiprotein

position:2456240:-1
position: 2456240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2460529:-1
position: 2460529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2458094-2460529:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2456240-2456359:-1:exon

LOC110471349
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110471349
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2498759..2576875)
location: region:2498759-2576875:-1
so has part: feature:2498759-2576875:-1:exon
subclass of: SO_0000010

110471349
type: Gene
SIO_000068: ncbigene

position:2498759:-1
position: 2498759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2576875:-1
position: 2576875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2498759-2576875:-1:exon

LOC110471349
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110471349
product: protocadherin alpha-C1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031506080.1
SIO_010081: LOC110471349
subclass of: SO_0000673
so part of: LOC110471349
location: complement(join(2498759..2502011,2502450..2502551,2536902..2536990,2539100..2539158,2574444..2576875))
location: region:2498759-2576875:-1
so has part: feature:2574444-2576875:-1:exon
so has part: feature:2539100-2539158:-1:exon
so has part: feature:2536902-2536990:-1:exon
so has part: feature:2502450-2502551:-1:exon
so has part: feature:2498759-2502011:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2574444-2576875:-1:exon

position:2574444:-1
position: 2574444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2539100-2539158:-1:exon

position:2539100:-1
position: 2539100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2539158:-1
position: 2539158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2536902-2536990:-1:exon

position:2536902:-1
position: 2536902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2536990:-1
position: 2536990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2502450-2502551:-1:exon

position:2502450:-1
position: 2502450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2502551:-1
position: 2502551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2498759-2502011:-1:exon

position:2502011:-1
position: 2502011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110471349
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110471349
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin alpha-C1 isoform X2
translation: MRGYLMVFCLICCTADGQIVYSIAEETERGASVGNIAKDLGIDAATLSARKFRMITGSSKQYFNINASTGALSVNEPIDREQLCELKSVCLLNYELVLENPLELYRMEFKVLDINDNSPSFPLSEYHINMPEFLSPGARFTLPSAQDLDEGANSVQNYTLSLDEHFYLEMQIRGDGSKYPELVLKKALDREQQATHRLLLTAKDGGNPPKSGDVPVIVTVLDTNDNAPEFEHSVYRASILENSPSGTLVVQVHATDLDEGPNGEVRYSFSNTTSADLQRMFSIHPHTGEVTVNGVLAVQRPLLEMLIEARDNGAFGMSSTAKLLVEITDVNNHGPEITITSLSSPIPEDAIPGTVIALLSILDKDPGENGKVTCQISENLPFQLKPSLQNYYSLVTSELLDRELISEYNITITATDLGSPPLSTQKTVWVQISDVNDNPPVFSAGAFDVFVEENNPLGAFLYQVSASDPDIGENGRVSYVLRNSTVAGSALTSFLSMNLANGSIYAKRAFDFEQLRSFHFQVEAKDNGSPALSAAITVNVYISDQNDNAPAILYPTSQNGSVAVEVVPRLADEDYLVTKVVADDEDNAQNAWLSYHLAHSSDSTLFQLSPHTGELRTTRSMRSTDFLKHKVVVVVRDHGDPPLSSTVTVGILLADTLPQALPDFDDSGEPPPLLNTTNIYLIVSLSCVSFIFAAFIFFLAIIRLCRCRTCCCSGCCCPAEDYQKYCYSVHMLPSSHLPPDMLEVTGVGKLTHTYLYRASVGLGPSNSSIPNGDAGNVPSGSRLQVPGPCIQVQQVQSDRLSAVLVPKHPNPDWRYSASLRAGMQSAVHMEEAGVLRGGAAGPDQQWPTVSSATAEPEAGEVSPPVGAGVNSNSWTFKFGPGNSKQGGPESKKQTQVSFLLRRKGESSQYSQ
SIO_010081: LOC110471349
subclass of: SO_0000673
so part of: LOC110471349
location: complement(join(2501941..2502011,2502450..2502551,2536902..2536990,2539100..2539158,2574444..2576858))
location: region:2501941-2576858:-1
so has part: feature:2574444-2576858:-1:exon
so has part: feature:2539100-2539158:-1:exon
so has part: feature:2536902-2536990:-1:exon
so has part: feature:2502450-2502551:-1:exon
so has part: feature:2501941-2502011:-1:exon

XP_031361940.1
type: Protein
SIO_000068: ncbiprotein

position:2501941:-1
position: 2501941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2576858:-1
position: 2576858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2574444-2576858:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2539100-2539158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2536902-2536990:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2502450-2502551:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2501941-2502011:-1:exon

LOC110471349
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110471349
product: protocadherin alpha-C1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_031506079.1
SIO_010081: LOC110471349
subclass of: SO_0000673
so part of: LOC110471349
location: complement(join(2502058..2502551,2536902..2536990,2539100..2539158,2574444..2576873))
location: region:2502058-2576873:-1
so has part: feature:2574444-2576873:-1:exon
so has part: feature:2539100-2539158:-1:exon
so has part: feature:2536902-2536990:-1:exon
so has part: feature:2502058-2502551:-1:exon

position:2502058:-1
position: 2502058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2576873:-1
position: 2576873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2574444-2576873:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2539100-2539158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2536902-2536990:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2502058-2502551:-1:exon

LOC110471349
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110471349
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin alpha-C1 isoform X1
translation: MRGYLMVFCLICCTADGQIVYSIAEETERGASVGNIAKDLGIDAATLSARKFRMITGSSKQYFNINASTGALSVNEPIDREQLCELKSVCLLNYELVLENPLELYRMEFKVLDINDNSPSFPLSEYHINMPEFLSPGARFTLPSAQDLDEGANSVQNYTLSLDEHFYLEMQIRGDGSKYPELVLKKALDREQQATHRLLLTAKDGGNPPKSGDVPVIVTVLDTNDNAPEFEHSVYRASILENSPSGTLVVQVHATDLDEGPNGEVRYSFSNTTSADLQRMFSIHPHTGEVTVNGVLAVQRPLLEMLIEARDNGAFGMSSTAKLLVEITDVNNHGPEITITSLSSPIPEDAIPGTVIALLSILDKDPGENGKVTCQISENLPFQLKPSLQNYYSLVTSELLDRELISEYNITITATDLGSPPLSTQKTVWVQISDVNDNPPVFSAGAFDVFVEENNPLGAFLYQVSASDPDIGENGRVSYVLRNSTVAGSALTSFLSMNLANGSIYAKRAFDFEQLRSFHFQVEAKDNGSPALSAAITVNVYISDQNDNAPAILYPTSQNGSVAVEVVPRLADEDYLVTKVVADDEDNAQNAWLSYHLAHSSDSTLFQLSPHTGELRTTRSMRSTDFLKHKVVVVVRDHGDPPLSSTVTVGILLADTLPQALPDFDDSGEPPPLLNTTNIYLIVSLSCVSFIFAAFIFFLAIIRLCRCRTCCCSGCCCPAEDYQKYCYSVHMLPSSHLPPDMLEVTGVGKLTHTYLYRASVGLGPSNSSIPNGDAGNVPSGSRLQVPGPCIQVQQVQSDRLSAVLVPKHPNPDWRYSASLRAGMQSAVHMEEAGVLRGGAAGPDQQWPTVSSATAEPEAGEVSPPVGAGVNSNSWTFKFGPGNSKQGGPGELPDKFIIPGSPAIISIRQEPPNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTENSDQ
SIO_010081: LOC110471349
subclass of: SO_0000673
so part of: LOC110471349
location: complement(join(2502241..2502551,2536902..2536990,2539100..2539158,2574444..2576858))
location: region:2502241-2576858:-1
so has part: feature:2574444-2576858:-1:exon
so has part: feature:2539100-2539158:-1:exon
so has part: feature:2536902-2536990:-1:exon
so has part: feature:2502241-2502551:-1:exon

XP_031361939.1
type: Protein
SIO_000068: ncbiprotein

position:2502241:-1
position: 2502241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2574444-2576858:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2539100-2539158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2536902-2536990:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2502241-2502551:-1:exon

LOC110471348
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110471348
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2584564..2590483)
location: region:2584564-2590483:-1
so has part: feature:2584564-2590483:-1:exon
subclass of: SO_0000010

110471348
type: Gene
SIO_000068: ncbigene

position:2584564:-1
position: 2584564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2590483:-1
position: 2590483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2584564-2590483:-1:exon

LOC110471348
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110471348
product: uncharacterized LOC110471348
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021531912.1
SIO_010081: LOC110471348
subclass of: SO_0000673
so part of: LOC110471348
location: complement(join(2584564..2584671,2585059..2585211,2587184..2590483))
location: region:2584564-2590483:-1
so has part: feature:2587184-2590483:-1:exon
so has part: feature:2585059-2585211:-1:exon
so has part: feature:2584564-2584671:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2587184-2590483:-1:exon

position:2587184:-1
position: 2587184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2585059-2585211:-1:exon

position:2585059:-1
position: 2585059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2585211:-1
position: 2585211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2584564-2584671:-1:exon

position:2584671:-1
position: 2584671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110471348
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110471348
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC110471348
translation: MPEGRRRGRGEGEGEETKGPTITAAEEDSVRKGNLAPRRSERAEPRPVHPRPEPQREEGGGRLLTERAAVGHQVPLLAAKAPSDTEGRQLLPEPQSRRCQREEECGGPAREGRPESRAGCRSSQGDHKAIGGGVTESRSGPEKGSEVTVAAMRWEAVLRVLVLQAAWALAGGQVRYSVPEEAKAGTVVGRLAQDLGLEAGEAEARRLRLVAQGRRASVEVSGASGALLVSSRLDREELCGKSAPCALRLEVLLERPLRVFHVELEVTDINDNAPVFRHSRSLCVADGAAKSDLMVFSPNFPPPPPGPAAENGSAGKGPSLSPLASSMFAISLKVNVIASLNQVPLRLFDVLSLKRQDALMSF
SIO_010081: LOC110471348
subclass of: SO_0000673
so part of: LOC110471348
location: complement(join(2584564..2584671,2585059..2585211,2587184..2588011))
location: region:2584564-2588011:-1
so has part: feature:2587184-2588011:-1:exon
so has part: feature:2585059-2585211:-1:exon
so has part: feature:2584564-2584671:-1:exon

XP_021387587.1
type: Protein
SIO_000068: ncbiprotein

position:2588011:-1
position: 2588011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2587184-2588011:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2585059-2585211:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2584564-2584671:-1:exon

LOC110471325
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110471325
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2654828..2659555)
location: region:2654828-2659555:-1
so has part: feature:2654828-2659555:-1:exon
subclass of: SO_0000010

110471325
type: Gene
SIO_000068: ncbigene

position:2654828:-1
position: 2654828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2659555:-1
position: 2659555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2654828-2659555:-1:exon

LOC110471325
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110471325
product: protocadherin-10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021531888.1
SIO_010081: LOC110471325
subclass of: SO_0000673
so part of: LOC110471325
location: complement(join(2654828..2655459,2655669..2655757,2655861..2655919,2657069..2659555))
location: region:2654828-2659555:-1
so has part: feature:2657069-2659555:-1:exon
so has part: feature:2655861-2655919:-1:exon
so has part: feature:2655669-2655757:-1:exon
so has part: feature:2654828-2655459:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2657069-2659555:-1:exon

position:2657069:-1
position: 2657069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2655861-2655919:-1:exon

position:2655861:-1
position: 2655861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2655919:-1
position: 2655919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2655669-2655757:-1:exon

position:2655669:-1
position: 2655669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2655757:-1
position: 2655757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2654828-2655459:-1:exon

position:2655459:-1
position: 2655459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110471325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110471325
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-10
translation: MGAGTRSGRGQLFLRSLLFLLLAGSPARHPVRGQLRYAVPEELEHGAFVANLGEDLGLDVSTLSARRFRIVSRAGARQHLEVNLENGILFVNERIDREEVCEAGGTCLLHLQLLVESPLELYRVEVEVLDINDHAPTFPWQEYVLEVAESAVLGARFPLESAQDPDVGTNSVHTYRLSPNGFFSLEVQTRSDASKFAELVLERALDREQQRVHRVLLTALDGGVPERSGTAHILITVLDANDNVPAFDQPSYGVSLPEDAPAGTLVIQLNATDLDEGPNGEIEYSFSGHAPPRVRELFHVEPRSGQVLLKGRLDYERASLHELYVQAKDRGPSAVAVHCRVLVHLLDVNDNAPEVTLTSVSTPVLEDAPPGTVIAVISVLDRDSGDNGRVSCEVGPNVPFELRSSFRNYYTLVTTQALDRELVPEYNVSITARDMGSPALLTRSTLTIPVSDVNDNAPRFLQPSYSVYVMENNAPGASICSVSALDPDCQQNAYLSYSIADGHIHGMPVGTYVSINSDSGHMYALRSLDYEQIRSFQIQVQAQDAGFPPLSANVTVHIFVLDQNDNAPVIVSPMPRNGSVATELVPRSARPGYLVGTVSAVDADAGLNSRLSYQLLQATDFTLFSVAPDTGELRTLRSFLEQDASRQQLVVQVRDGGQPALSATMSLLLSVVETMPQTLSDFSEFSLPPEVSSSSPLTLYLLVSLGSISFTFLLAILILTAIRCRGERRSRQGDSCPPPRCRCCPGSRPSSDGLKTSNLTAQPPAGTTAATCLDVPAGGPPGYCYKVCLGPESAQSDFMFLKPCSPPRNNEKDPGKRSRPDQHLQVSKEAKQPNTDWLPPNTQRPALKSSQSLEDVGEIRRALQKEHERLCTLVTPVSEFQKASAGPNSIWTPQYSPLYPALDYQHNVYIPGTPTLLSSKDGPLFPGRENKNSFSTFGKRKKMTTYCDMHDSVVINNDLK
SIO_010081: LOC110471325
subclass of: SO_0000673
so part of: LOC110471325
location: complement(join(2655212..2655459,2655669..2655757,2655861..2655919,2657069..2659555))
location: region:2655212-2659555:-1
so has part: feature:2657069-2659555:-1:exon
so has part: feature:2655861-2655919:-1:exon
so has part: feature:2655669-2655757:-1:exon
so has part: feature:2655212-2655459:-1:exon

XP_021387563.1
type: Protein
SIO_000068: ncbiprotein

position:2655212:-1
position: 2655212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2657069-2659555:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2655861-2655919:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2655669-2655757:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2655212-2655459:-1:exon

ZMAT2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: ZMAT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2668809..2679960)
location: region:2668809-2679960:-1
so has part: feature:2668809-2679960:-1:exon
subclass of: SO_0000010

110471327
type: Gene
SIO_000068: ncbigene

position:2668809:-1
position: 2668809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2679960:-1
position: 2679960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2668809-2679960:-1:exon

ZMAT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ZMAT2
product: zinc finger matrin-type 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 44 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_021531890.1
SIO_010081: ZMAT2
subclass of: SO_0000673
so part of: ZMAT2
location: complement(join(2668809..2670239,2671707..2671852,2673570..2673643,2674685..2674808,2675923..2676016,2679854..2679960))
location: region:2668809-2679960:-1
so has part: feature:2679854-2679960:-1:exon
so has part: feature:2675923-2676016:-1:exon
so has part: feature:2674685-2674808:-1:exon
so has part: feature:2673570-2673643:-1:exon
so has part: feature:2671707-2671852:-1:exon
so has part: feature:2668809-2670239:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2679854-2679960:-1:exon

position:2679854:-1
position: 2679854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2675923-2676016:-1:exon

position:2675923:-1
position: 2675923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2676016:-1
position: 2676016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2674685-2674808:-1:exon

position:2674685:-1
position: 2674685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2674808:-1
position: 2674808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2673570-2673643:-1:exon

position:2673570:-1
position: 2673570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2673643:-1
position: 2673643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2671707-2671852:-1:exon

position:2671707:-1
position: 2671707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2671852:-1
position: 2671852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2668809-2670239:-1:exon

position:2670239:-1
position: 2670239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZMAT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ZMAT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger matrin-type protein 2
translation: MASGSGTKNLDFRRKWDKDEYEKLAEKRLTEEREKKDGKPAQPVKRELLRHRDYKVDLESKLGKTIVITKTTPQSEMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSTLDQVKKRFEVNKKKMEEKQKDYDFEERMKELREEEEKAKAYKKEKQREKKRRAEEDLTFEEDDEMAAVMGFSGFGSTKKNH
SIO_010081: ZMAT2
subclass of: SO_0000673
so part of: ZMAT2
location: complement(join(2670096..2670239,2671707..2671852,2673570..2673643,2674685..2674808,2675923..2676016,2679854..2679871))
location: region:2670096-2679871:-1
so has part: feature:2679854-2679871:-1:exon
so has part: feature:2675923-2676016:-1:exon
so has part: feature:2674685-2674808:-1:exon
so has part: feature:2673570-2673643:-1:exon
so has part: feature:2671707-2671852:-1:exon
so has part: feature:2670096-2670239:-1:exon

XP_021387565.1
type: Protein
SIO_000068: ncbiprotein

position:2670096:-1
position: 2670096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2679871:-1
position: 2679871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2679854-2679871:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2675923-2676016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2674685-2674808:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2673570-2673643:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2671707-2671852:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2670096-2670239:-1:exon

LOC110471347
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110471347
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2679975..2685601
location: region:2679975-2685601:1
so has part: feature:2679975-2685601:1:exon
subclass of: SO_0000010

110471347
type: Gene
SIO_000068: ncbigene

position:2679975:1
position: 2679975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2685601:1
position: 2685601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2679975-2685601:1:exon

LOC110471347
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110471347
product: histidine--tRNA ligase, cytoplasmic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031506064.1
SIO_010081: LOC110471347
subclass of: SO_0000673
so part of: LOC110471347
location: join(2679975..2680181,2680270..2680389,2680724..2680819,2681609..2681734,2681879..2681986,2682422..2682520,2682831..2682983,2683433..2683540,2684194..2684310,2684621..2684767,2684972..2685601)
location: region:2679975-2685601:1
so has part: feature:2679975-2680181:1:exon
so has part: feature:2680270-2680389:1:exon
so has part: feature:2680724-2680819:1:exon
so has part: feature:2681609-2681734:1:exon
so has part: feature:2681879-2681986:1:exon
so has part: feature:2682422-2682520:1:exon
so has part: feature:2682831-2682983:1:exon
so has part: feature:2683433-2683540:1:exon
so has part: feature:2684194-2684310:1:exon
so has part: feature:2684621-2684767:1:exon
so has part: feature:2684972-2685601:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2679975-2680181:1:exon

position:2680181:1
position: 2680181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2680270-2680389:1:exon

position:2680270:1
position: 2680270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2680389:1
position: 2680389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2680724-2680819:1:exon

position:2680724:1
position: 2680724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2680819:1
position: 2680819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2681609-2681734:1:exon

position:2681609:1
position: 2681609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2681734:1
position: 2681734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2681879-2681986:1:exon

position:2681879:1
position: 2681879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2681986:1
position: 2681986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2682422-2682520:1:exon

position:2682422:1
position: 2682422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2682520:1
position: 2682520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2682831-2682983:1:exon

position:2682831:1
position: 2682831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2682983:1
position: 2682983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2683433-2683540:1:exon

position:2683433:1
position: 2683433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2683540:1
position: 2683540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2684194-2684310:1:exon

position:2684194:1
position: 2684194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2684310:1
position: 2684310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2684621-2684767:1:exon

position:2684621:1
position: 2684621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2684767:1
position: 2684767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2684972-2685601:1:exon

position:2684972:1
position: 2684972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110471347
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110471347
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histidine--tRNA ligase, cytoplasmic
translation: MLRLAPFAAARCLPAGPRLGPLCLAGNCGSFARSRPPAGDRGALSRQVRAAAGGERLPVLKTPKGTRDHPPAQAALRERLLGAVVSCFKRHGAAAIDTPVLELRETLLGKYGEESKLIYELQDQGGELLALRYDLTVPFARYLAMNKITKMKRYHVAKVYRRDNPATTRGRYREFYQCDFDIAGQFDPMIPDAECLKIVHEILSDLQLGDFVIKVNDRRILNGVFAVCGVPESKLISACSTVDKLDKVPWEEVRSEMVAEKGLSPEAADRIGEYVQLHGEHHGVVPLALFWAGAGRCRYDGLVGMFDPKGRKVPCVGVSIGIERIFSILEQRLEASGEKLRTTETQVLVATPQKHLLAARMKLISELWDAGIKAEMLYKKDPKLLKQLQYCEDTGIPLAAIVGEQELADGVVKLRDVATRKEVDIPREKLIDEIRRRLEP
SIO_010081: LOC110471347
subclass of: SO_0000673
so part of: LOC110471347
location: join(2679990..2680181,2680270..2680389,2680724..2680819,2681609..2681734,2681879..2681986,2682422..2682520,2682831..2682983,2683433..2683540,2684194..2684310,2684621..2684767,2684972..2685028)
location: region:2679990-2685028:1
so has part: feature:2679990-2680181:1:exon
so has part: feature:2680270-2680389:1:exon
so has part: feature:2680724-2680819:1:exon
so has part: feature:2681609-2681734:1:exon
so has part: feature:2681879-2681986:1:exon
so has part: feature:2682422-2682520:1:exon
so has part: feature:2682831-2682983:1:exon
so has part: feature:2683433-2683540:1:exon
so has part: feature:2684194-2684310:1:exon
so has part: feature:2684621-2684767:1:exon
so has part: feature:2684972-2685028:1:exon

XP_031361924.1
type: Protein
SIO_000068: ncbiprotein

position:2679990:1
position: 2679990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2685028:1
position: 2685028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2679990-2680181:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2680270-2680389:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2680724-2680819:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2681609-2681734:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2681879-2681986:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2682422-2682520:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2682831-2682983:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2683433-2683540:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2684194-2684310:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2684621-2684767:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2684972-2685028:1:exon

HARS1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: HARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2685640..2697952
location: region:2685640-2697952:1
so has part: feature:2685640-2697952:1:exon
subclass of: SO_0000010

110471346
type: Gene
SIO_000068: ncbigene

position:2685640:1
position: 2685640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2697952:1
position: 2697952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2685640-2697952:1:exon

HARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: HARS1
product: histidyl-tRNA synthetase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 25 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021531910.1
SIO_010081: HARS1
subclass of: SO_0000673
so part of: HARS1
location: join(2685640..2685767,2686492..2686581,2688224..2688343,2688525..2688620,2689335..2689460,2691469..2691576,2693239..2693337,2694383..2694476,2694983..2695089,2696195..2696311,2696671..2696817,2697456..2697952)
location: region:2685640-2697952:1
so has part: feature:2685640-2685767:1:exon
so has part: feature:2686492-2686581:1:exon
so has part: feature:2688224-2688343:1:exon
so has part: feature:2688525-2688620:1:exon
so has part: feature:2689335-2689460:1:exon
so has part: feature:2691469-2691576:1:exon
so has part: feature:2693239-2693337:1:exon
so has part: feature:2694383-2694476:1:exon
so has part: feature:2694983-2695089:1:exon
so has part: feature:2696195-2696311:1:exon
so has part: feature:2696671-2696817:1:exon
so has part: feature:2697456-2697952:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2685640-2685767:1:exon

position:2685767:1
position: 2685767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2686492-2686581:1:exon

position:2686492:1
position: 2686492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2686581:1
position: 2686581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2688224-2688343:1:exon

position:2688224:1
position: 2688224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2688343:1
position: 2688343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2688525-2688620:1:exon

position:2688525:1
position: 2688525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2688620:1
position: 2688620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2689335-2689460:1:exon

position:2689335:1
position: 2689335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2689460:1
position: 2689460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2691469-2691576:1:exon

position:2691469:1
position: 2691469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2691576:1
position: 2691576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2693239-2693337:1:exon

position:2693239:1
position: 2693239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2693337:1
position: 2693337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2694383-2694476:1:exon

position:2694383:1
position: 2694383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2694476:1
position: 2694476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2694983-2695089:1:exon

position:2694983:1
position: 2694983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2695089:1
position: 2695089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2696195-2696311:1:exon

position:2696195:1
position: 2696195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2696311:1
position: 2696311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2696671-2696817:1:exon

position:2696671:1
position: 2696671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2696817:1
position: 2696817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2697456-2697952:1:exon

position:2697456:1
position: 2697456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HARS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: HARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histidine--tRNA ligase, cytoplasmic
translation: MAEEAAVRAQAETVRRLKQDKADADEIAKEVAKLLEMKAQLGTDEGKQKFVLKTPKGTRDFGPKEMAIRERAFKAIISCFKRHGAEVIDTPVFELKETLTGKYGEDSKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKITNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAGQFDPMIPDAECLKIVHEILSDLQLGDFVIKVNDRRILDGMFAVCGVPDSKFRTICSSVDKLDKVPWEEVRSEMVAEKGLSPEAADCIGEYVQLHDDGLVGMFDPKGRKVPCVGVSIGIERIFSILEQRLEASEEKIRTTETQVLVASAQKKLLEERLKLISELWDAGIKAEMLYKKNPKLLNQLQYCEETGIPLVAIVGEQELKDGVVKLRIVATREEVNVRRESLVEEIRIRTSQC
SIO_010081: HARS1
subclass of: SO_0000673
so part of: HARS1
location: join(2685690..2685767,2686492..2686581,2688224..2688343,2688525..2688620,2689335..2689460,2691469..2691576,2693239..2693337,2694383..2694476,2694983..2695089,2696195..2696311,2696671..2696817,2697456..2697515)
location: region:2685690-2697515:1
so has part: feature:2685690-2685767:1:exon
so has part: feature:2686492-2686581:1:exon
so has part: feature:2688224-2688343:1:exon
so has part: feature:2688525-2688620:1:exon
so has part: feature:2689335-2689460:1:exon
so has part: feature:2691469-2691576:1:exon
so has part: feature:2693239-2693337:1:exon
so has part: feature:2694383-2694476:1:exon
so has part: feature:2694983-2695089:1:exon
so has part: feature:2696195-2696311:1:exon
so has part: feature:2696671-2696817:1:exon
so has part: feature:2697456-2697515:1:exon

XP_021387585.1
type: Protein
SIO_000068: ncbiprotein

position:2685690:1
position: 2685690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2697515:1
position: 2697515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2685690-2685767:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2686492-2686581:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2688224-2688343:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2688525-2688620:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2689335-2689460:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2691469-2691576:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2693239-2693337:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2694383-2694476:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2694983-2695089:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2696195-2696311:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2696671-2696817:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2697456-2697515:1:exon

APBB3
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: APBB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2704341..2708675
location: region:2704341-2708675:1
so has part: feature:2704341-2708675:1:exon
subclass of: SO_0000010

110471337
type: Gene
SIO_000068: ncbigene

position:2704341:1
position: 2704341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2708675:1
position: 2708675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2704341-2708675:1:exon

APBB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: APBB3
product: amyloid beta precursor protein binding family B member 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021531901.1
SIO_010081: APBB3
subclass of: SO_0000673
so part of: APBB3
location: join(2704341..2704443,2705387..2705577,2705875..2705951,2706195..2706252,2706434..2706574,2706933..2707060,2707164..2707169,2707253..2707367,2707453..2707540,2707697..2707780,2707932..2708047,2708174..2708356,2708454..2708675)
location: region:2704341-2708675:1
so has part: feature:2704341-2704443:1:exon
so has part: feature:2705387-2705577:1:exon
so has part: feature:2705875-2705951:1:exon
so has part: feature:2706195-2706252:1:exon
so has part: feature:2706434-2706574:1:exon
so has part: feature:2706933-2707060:1:exon
so has part: feature:2707164-2707169:1:exon
so has part: feature:2707253-2707367:1:exon
so has part: feature:2707453-2707540:1:exon
so has part: feature:2707697-2707780:1:exon
so has part: feature:2707932-2708047:1:exon
so has part: feature:2708174-2708356:1:exon
so has part: feature:2708454-2708675:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2704341-2704443:1:exon

position:2704443:1
position: 2704443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2705387-2705577:1:exon

position:2705387:1
position: 2705387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2705577:1
position: 2705577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2705875-2705951:1:exon

position:2705875:1
position: 2705875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2705951:1
position: 2705951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2706195-2706252:1:exon

position:2706195:1
position: 2706195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2706252:1
position: 2706252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2706434-2706574:1:exon

position:2706434:1
position: 2706434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2706574:1
position: 2706574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2706933-2707060:1:exon

position:2706933:1
position: 2706933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2707060:1
position: 2707060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2707164-2707169:1:exon

position:2707164:1
position: 2707164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2707169:1
position: 2707169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2707253-2707367:1:exon

position:2707253:1
position: 2707253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2707367:1
position: 2707367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2707453-2707540:1:exon

position:2707453:1
position: 2707453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2707540:1
position: 2707540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2707697-2707780:1:exon

position:2707697:1
position: 2707697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2707780:1
position: 2707780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2707932-2708047:1:exon

position:2707932:1
position: 2707932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2708047:1
position: 2708047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2708174-2708356:1:exon

position:2708174:1
position: 2708174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2708356:1
position: 2708356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2708454-2708675:1:exon

position:2708454:1
position: 2708454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

APBB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: APBB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-beta A4 precursor protein-binding family B member 3
translation: MLGKDYMLAIVLVNCDDNLWSDQSLETDPDLPPGWRKICDSLGTYYWHVPTGTTQWQHPARSTGPGGHTDADGEETLQGRECQGSAAKHSAKDRPIPSPMASLSRRHSLSWHGDEFQHSAEPGSKCFAVRSLGWVEIPEEDLAPGKSSIAVNNCIQQLSNSKGQGSAENQGEGQDLVMILKKDTMSLVDPLDRSLIHRQPILNIRVWGVGCNNGRDRDFAFVASDKDTCVLKCHVFHCNVPAKGIAKALHEMCSKIVAERAVASSRLPRAATLEPISAEDLPLQVDILEAVRQSMQTYEALYIGSLPVPRAMGMDVLNEAIEKLTRRPGRENWTPSLIYVSDTAMRVQPAQEPEEAAHIWECQVRYVTFLGVGRDAHTFALIVDTGRRFQCAAFWCEPDAGTISEAVQAACMVQYQKCLVAAAPGAKAKSAAGRGRAGPAAAGDAARGAAKAGGGGGGAGAGARKRGLFSFLEVFRLRRALLHSP
SIO_010081: APBB3
subclass of: SO_0000673
so part of: APBB3
location: join(2704395..2704443,2705387..2705577,2705875..2705951,2706195..2706252,2706434..2706574,2706933..2707060,2707164..2707169,2707253..2707367,2707453..2707540,2707697..2707780,2707932..2708047,2708174..2708356,2708454..2708675)
location: region:2704395-2708675:1
so has part: feature:2704395-2704443:1:exon
so has part: feature:2705387-2705577:1:exon
so has part: feature:2705875-2705951:1:exon
so has part: feature:2706195-2706252:1:exon
so has part: feature:2706434-2706574:1:exon
so has part: feature:2706933-2707060:1:exon
so has part: feature:2707164-2707169:1:exon
so has part: feature:2707253-2707367:1:exon
so has part: feature:2707453-2707540:1:exon
so has part: feature:2707697-2707780:1:exon
so has part: feature:2707932-2708047:1:exon
so has part: feature:2708174-2708356:1:exon
so has part: feature:2708454-2708675:1:exon

XP_021387576.1
type: Protein
SIO_000068: ncbiprotein

position:2704395:1
position: 2704395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2704395-2704443:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2705387-2705577:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2705875-2705951:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2706195-2706252:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2706434-2706574:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2706933-2707060:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2707164-2707169:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2707253-2707367:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2707453-2707540:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2707697-2707780:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2707932-2708047:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2708174-2708356:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2708454-2708675:1:exon

SRA1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SRA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2708830..2710368
location: region:2708830-2710368:1
so has part: feature:2708830-2710368:1:exon
subclass of: SO_0000010

110471345
type: Gene
SIO_000068: ncbigene

position:2708830:1
position: 2708830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2710368:1
position: 2710368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2708830-2710368:1:exon

SRA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SRA1
product: steroid receptor RNA activator 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031506034.1
SIO_010081: SRA1
subclass of: SO_0000673
so part of: SRA1
location: join(2708830..2708869,2709087..2709212,2709380..2709594,2709760..2709868,2709975..2710368)
location: region:2708830-2710368:1
so has part: feature:2708830-2708869:1:exon
so has part: feature:2709087-2709212:1:exon
so has part: feature:2709380-2709594:1:exon
so has part: feature:2709760-2709868:1:exon
so has part: feature:2709975-2710368:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2708830-2708869:1:exon

position:2708869:1
position: 2708869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2709087-2709212:1:exon

position:2709087:1
position: 2709087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2709212:1
position: 2709212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2709380-2709594:1:exon

position:2709380:1
position: 2709380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2709594:1
position: 2709594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2709760-2709868:1:exon

position:2709760:1
position: 2709760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2709868:1
position: 2709868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2709975-2710368:1:exon

position:2709975:1
position: 2709975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SRA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SRA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: steroid receptor RNA activator 1
translation: MAESYVKPGNQERGWNDPPQFSYGLQAQAGGSRRTPLTRRAAAPPAGAPPGAPPGPPGAPAGPAAPPPRALGPPPQGSAGAAPRAEARPGAACPEQEECSVSADTVLAPLRAALDACRATVQKQVCNDIGRRLTVLEDAWAQGKLSAPVRKRMSLLVQELQQQHWDAADEIHRSLMVDHVNEVSQWMVGVKRLIAETRELPTAETDGSADTEPATEPEQEEP
SIO_010081: SRA1
subclass of: SO_0000673
so part of: SRA1
location: join(2708845..2708869,2709087..2709212,2709380..2709594,2709760..2709868,2709975..2710168)
location: region:2708845-2710168:1
so has part: feature:2708845-2708869:1:exon
so has part: feature:2709087-2709212:1:exon
so has part: feature:2709380-2709594:1:exon
so has part: feature:2709760-2709868:1:exon
so has part: feature:2709975-2710168:1:exon

XP_031361894.1
type: Protein
SIO_000068: ncbiprotein

position:2708845:1
position: 2708845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2710168:1
position: 2710168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2708845-2708869:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2709087-2709212:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2709380-2709594:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2709760-2709868:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2709975-2710168:1:exon

LOC110471323
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110471323
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2710932..2809696)
location: region:2710932-2809696:-1
so has part: feature:2710932-2809696:-1:exon
subclass of: SO_0000010

110471323
type: Gene
SIO_000068: ncbigene

position:2710932:-1
position: 2710932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2809696:-1
position: 2809696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2710932-2809696:-1:exon

LOC110471323
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110471323
product: ankyrin repeat and KH domain-containing protein 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021531885.2
SIO_010081: LOC110471323
subclass of: SO_0000673
so part of: LOC110471323
location: complement(join(2710932..2711156,2711327..2711500,2715007..2715171,2716077..2716252,2717217..2717468,2723570..2725185,2725490..2725639,2727175..2727285,2728819..2728965,2729722..2729799,2730234..2730687,2731008..2731182,2732168..2732284,2732580..2732675,2733777..2733939,2734768..2734943,2736168..2736381,2737141..2737283,2738723..2738868,2739628..2739739,2739874..2740019,2746717..2747460,2755503..2755605,2756257..2756400,2756539..2756666,2757258..2757345,2764567..2764676,2766123..2766314,2766533..2766770,2769173..2769267,2770788..2771021,2772080..2772227,2773095..2773242,2774590..2774746,2794926..2795079,2809418..2809696))
location: region:2710932-2809696:-1
so has part: feature:2809418-2809696:-1:exon
so has part: feature:2794926-2795079:-1:exon
so has part: feature:2774590-2774746:-1:exon
so has part: feature:2773095-2773242:-1:exon
so has part: feature:2772080-2772227:-1:exon
so has part: feature:2770788-2771021:-1:exon
so has part: feature:2769173-2769267:-1:exon
so has part: feature:2766533-2766770:-1:exon
so has part: feature:2766123-2766314:-1:exon
so has part: feature:2764567-2764676:-1:exon
so has part: feature:2757258-2757345:-1:exon
so has part: feature:2756539-2756666:-1:exon
so has part: feature:2756257-2756400:-1:exon
so has part: feature:2755503-2755605:-1:exon
so has part: feature:2746717-2747460:-1:exon
so has part: feature:2739874-2740019:-1:exon
so has part: feature:2739628-2739739:-1:exon
so has part: feature:2738723-2738868:-1:exon
so has part: feature:2737141-2737283:-1:exon
so has part: feature:2736168-2736381:-1:exon
so has part: feature:2734768-2734943:-1:exon
so has part: feature:2733777-2733939:-1:exon
so has part: feature:2732580-2732675:-1:exon
so has part: feature:2732168-2732284:-1:exon
so has part: feature:2731008-2731182:-1:exon
so has part: feature:2730234-2730687:-1:exon
so has part: feature:2729722-2729799:-1:exon
so has part: feature:2728819-2728965:-1:exon
so has part: feature:2727175-2727285:-1:exon
so has part: feature:2725490-2725639:-1:exon
so has part: feature:2723570-2725185:-1:exon
so has part: feature:2717217-2717468:-1:exon
so has part: feature:2716077-2716252:-1:exon
so has part: feature:2715007-2715171:-1:exon
so has part: feature:2711327-2711500:-1:exon
so has part: feature:2710932-2711156:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2809418-2809696:-1:exon

position:2809418:-1
position: 2809418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2794926-2795079:-1:exon

position:2794926:-1
position: 2794926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2795079:-1
position: 2795079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2774590-2774746:-1:exon

position:2774590:-1
position: 2774590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2774746:-1
position: 2774746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2773095-2773242:-1:exon

position:2773095:-1
position: 2773095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2773242:-1
position: 2773242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2772080-2772227:-1:exon

position:2772080:-1
position: 2772080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2772227:-1
position: 2772227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2770788-2771021:-1:exon

position:2770788:-1
position: 2770788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2771021:-1
position: 2771021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2769173-2769267:-1:exon

position:2769173:-1
position: 2769173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2769267:-1
position: 2769267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2766533-2766770:-1:exon

position:2766533:-1
position: 2766533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2766770:-1
position: 2766770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2766123-2766314:-1:exon

position:2766123:-1
position: 2766123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2766314:-1
position: 2766314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2764567-2764676:-1:exon

position:2764567:-1
position: 2764567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2764676:-1
position: 2764676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2757258-2757345:-1:exon

position:2757258:-1
position: 2757258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2757345:-1
position: 2757345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2756539-2756666:-1:exon

position:2756539:-1
position: 2756539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2756666:-1
position: 2756666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2756257-2756400:-1:exon

position:2756257:-1
position: 2756257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2756400:-1
position: 2756400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2755503-2755605:-1:exon

position:2755503:-1
position: 2755503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2755605:-1
position: 2755605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2746717-2747460:-1:exon

position:2746717:-1
position: 2746717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2747460:-1
position: 2747460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2739874-2740019:-1:exon

position:2739874:-1
position: 2739874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2740019:-1
position: 2740019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2739628-2739739:-1:exon

position:2739628:-1
position: 2739628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2739739:-1
position: 2739739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2738723-2738868:-1:exon

position:2738723:-1
position: 2738723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2738868:-1
position: 2738868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2737141-2737283:-1:exon

position:2737141:-1
position: 2737141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2737283:-1
position: 2737283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2736168-2736381:-1:exon

position:2736168:-1
position: 2736168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2736381:-1
position: 2736381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2734768-2734943:-1:exon

position:2734768:-1
position: 2734768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2734943:-1
position: 2734943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2733777-2733939:-1:exon

position:2733777:-1
position: 2733777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2733939:-1
position: 2733939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2732580-2732675:-1:exon

position:2732580:-1
position: 2732580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2732675:-1
position: 2732675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2732168-2732284:-1:exon

position:2732168:-1
position: 2732168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2732284:-1
position: 2732284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2731008-2731182:-1:exon

position:2731008:-1
position: 2731008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2731182:-1
position: 2731182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2730234-2730687:-1:exon

position:2730234:-1
position: 2730234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2730687:-1
position: 2730687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2729722-2729799:-1:exon

position:2729722:-1
position: 2729722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2729799:-1
position: 2729799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2728819-2728965:-1:exon

position:2728819:-1
position: 2728819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2728965:-1
position: 2728965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2727175-2727285:-1:exon

position:2727175:-1
position: 2727175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2727285:-1
position: 2727285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2725490-2725639:-1:exon

position:2725490:-1
position: 2725490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2725639:-1
position: 2725639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2723570-2725185:-1:exon

position:2723570:-1
position: 2723570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2725185:-1
position: 2725185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:2717217-2717468:-1:exon

position:2717217:-1
position: 2717217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2717468:-1
position: 2717468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:2716077-2716252:-1:exon

position:2716077:-1
position: 2716077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2716252:-1
position: 2716252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:2715007-2715171:-1:exon

position:2715007:-1
position: 2715007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2715171:-1
position: 2715171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:2711327-2711500:-1:exon

position:2711327:-1
position: 2711327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2711500:-1
position: 2711500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:2710932-2711156:-1:exon

position:2711156:-1
position: 2711156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110471323
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110471323
product: ankyrin repeat and KH domain-containing protein 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021531884.2
SIO_010081: LOC110471323
subclass of: SO_0000673
so part of: LOC110471323
location: complement(join(2710932..2711156,2711327..2711500,2715007..2715171,2716077..2716252,2717217..2717471,2723570..2725185,2725490..2725639,2727175..2727285,2728819..2728965,2729722..2729799,2730234..2730687,2731008..2731182,2732168..2732284,2732580..2732675,2733777..2733939,2734768..2734943,2736168..2736381,2737141..2737283,2738723..2738868,2739628..2739739,2739874..2740019,2746717..2747460,2755503..2755605,2756257..2756400,2756539..2756666,2757258..2757345,2764567..2764676,2766123..2766314,2766533..2766770,2769173..2769267,2770788..2771021,2772080..2772227,2773095..2773242,2774590..2774746,2794926..2795079,2809418..2809696))
location: region:2710932-2809696:-1
so has part: feature:2809418-2809696:-1:exon
so has part: feature:2794926-2795079:-1:exon
so has part: feature:2774590-2774746:-1:exon
so has part: feature:2773095-2773242:-1:exon
so has part: feature:2772080-2772227:-1:exon
so has part: feature:2770788-2771021:-1:exon
so has part: feature:2769173-2769267:-1:exon
so has part: feature:2766533-2766770:-1:exon
so has part: feature:2766123-2766314:-1:exon
so has part: feature:2764567-2764676:-1:exon
so has part: feature:2757258-2757345:-1:exon
so has part: feature:2756539-2756666:-1:exon
so has part: feature:2756257-2756400:-1:exon
so has part: feature:2755503-2755605:-1:exon
so has part: feature:2746717-2747460:-1:exon
so has part: feature:2739874-2740019:-1:exon
so has part: feature:2739628-2739739:-1:exon
so has part: feature:2738723-2738868:-1:exon
so has part: feature:2737141-2737283:-1:exon
so has part: feature:2736168-2736381:-1:exon
so has part: feature:2734768-2734943:-1:exon
so has part: feature:2733777-2733939:-1:exon
so has part: feature:2732580-2732675:-1:exon
so has part: feature:2732168-2732284:-1:exon
so has part: feature:2731008-2731182:-1:exon
so has part: feature:2730234-2730687:-1:exon
so has part: feature:2729722-2729799:-1:exon
so has part: feature:2728819-2728965:-1:exon
so has part: feature:2727175-2727285:-1:exon
so has part: feature:2725490-2725639:-1:exon
so has part: feature:2723570-2725185:-1:exon
so has part: feature:2717217-2717471:-1:exon
so has part: feature:2716077-2716252:-1:exon
so has part: feature:2715007-2715171:-1:exon
so has part: feature:2711327-2711500:-1:exon
so has part: feature:2710932-2711156:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2809418-2809696:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2794926-2795079:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2774590-2774746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2773095-2773242:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2772080-2772227:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2770788-2771021:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2769173-2769267:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2766533-2766770:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2766123-2766314:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2764567-2764676:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2757258-2757345:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2756539-2756666:-1:exon

urn:…
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LOC110471323
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110471323
product: ankyrin repeat and KH domain-containing protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021531880.2
SIO_010081: LOC110471323
subclass of: SO_0000673
so part of: LOC110471323
location: complement(join(2710932..2711156,2711327..2711500,2715007..2715171,2716077..2716252,2717217..2717447,2718561..2718740,2723570..2725185,2725490..2725639,2727175..2727285,2728819..2728965,2729722..2729799,2730234..2730687,2731008..2731182,2732168..2732284,2732580..2732675,2733777..2733939,2734768..2734943,2736168..2736381,2737141..2737283,2738723..2738868,2739628..2739739,2739874..2740019,2746717..2747460,2755503..2755605,2756257..2756400,2756539..2756666,2757258..2757345,2764567..2764676,2766123..2766314,2766533..2766770,2769173..2769267,2770788..2771021,2772080..2772227,2773095..2773242,2774590..2774746,2794926..2795079,2809418..2809696))
location: region:2710932-2809696:-1
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position:2718740:-1
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urn:…
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urn:…
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LOC110471323
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110471323
product: ankyrin repeat and KH domain-containing protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021531879.2
SIO_010081: LOC110471323
subclass of: SO_0000673
so part of: LOC110471323
location: complement(join(2710932..2711156,2711327..2711500,2715007..2715171,2716077..2716252,2717217..2717468,2718561..2718740,2723570..2725185,2725490..2725639,2727175..2727285,2728819..2728965,2729722..2729799,2730234..2730687,2731008..2731182,2732168..2732284,2732580..2732675,2733777..2733939,2734768..2734943,2736168..2736381,2737141..2737283,2738723..2738868,2739628..2739739,2739874..2740019,2746717..2747460,2755503..2755605,2756257..2756400,2756539..2756666,2757258..2757345,2764567..2764676,2766123..2766314,2766533..2766770,2769173..2769267,2770788..2771021,2772080..2772227,2773095..2773242,2774590..2774746,2794926..2795079,2809418..2809696))
location: region:2710932-2809696:-1
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LOC110471323
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110471323
product: ankyrin repeat and KH domain-containing protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021531878.2
SIO_010081: LOC110471323
subclass of: SO_0000673
so part of: LOC110471323
location: complement(join(2710932..2711156,2711327..2711500,2715007..2715171,2716077..2716252,2717217..2717471,2718561..2718740,2723570..2725185,2725490..2725639,2727175..2727285,2728819..2728965,2729722..2729799,2730234..2730687,2731008..2731182,2732168..2732284,2732580..2732675,2733777..2733939,2734768..2734943,2736168..2736381,2737141..2737283,2738723..2738868,2739628..2739739,2739874..2740019,2746717..2747460,2755503..2755605,2756257..2756400,2756539..2756666,2757258..2757345,2764567..2764676,2766123..2766314,2766533..2766770,2769173..2769267,2770788..2771021,2772080..2772227,2773095..2773242,2774590..2774746,2794926..2795079,2809418..2809696))
location: region:2710932-2809696:-1
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urn:…
SIO_000300: 37
SIO_000628: feature:2710932-2711156:-1:exon

LOC110471323
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110471323
product: ankyrin repeat and KH domain-containing protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 ESTs, 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021531883.1
SIO_010081: LOC110471323
subclass of: SO_0000673
so part of: LOC110471323
location: complement(join(2710936..2711156,2711327..2711500,2714523..2714569,2715007..2715171,2716077..2716252,2717217..2717468,2718561..2718740,2723570..2725185,2725490..2725639,2727175..2727285,2728819..2728965,2729722..2729799,2730234..2730687,2731008..2731182,2732168..2732284,2732580..2732675,2733777..2733939,2734768..2734943,2736168..2736381,2737141..2737283,2738723..2738868,2739628..2739739,2739874..2740019,2746717..2747460,2755503..2755605,2756257..2756400,2756539..2756666,2757258..2757345,2764567..2764676,2766123..2766314,2766533..2766770,2769173..2769267,2770788..2771021,2772080..2772227,2773095..2773242,2774590..2774746,2794926..2795079,2809418..2809696))
location: region:2710936-2809696:-1
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so has part: feature:2711327-2711500:-1:exon
so has part: feature:2710936-2711156:-1:exon

position:2710936:-1
position: 2710936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2809418-2809696:-1:exon

urn:…
SIO_000300: 2
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SIO_000300: 3
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SIO_000300: 4
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SIO_000300: 8
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SIO_000628: feature:2718561-2718740:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2717217-2717468:-1:exon

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urn:…
SIO_000300: 35
SIO_000628: feature:2715007-2715171:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2714523-2714569:-1:exon

position:2714523:-1
position: 2714523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2714569:-1
position: 2714569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:2711327-2711500:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2710936-2711156:-1:exon

LOC110471323
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110471323
product: ankyrin repeat and KH domain-containing protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 ESTs, 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021531882.1
SIO_010081: LOC110471323
subclass of: SO_0000673
so part of: LOC110471323
location: complement(join(2710936..2711156,2711327..2711500,2714523..2714569,2715007..2715171,2716077..2716252,2717217..2717471,2718546..2718740,2723570..2725185,2725490..2725639,2727175..2727285,2728819..2728965,2729722..2729799,2730234..2730687,2731008..2731182,2732168..2732284,2732580..2732675,2733777..2733939,2734768..2734943,2736168..2736381,2737141..2737283,2738723..2738868,2739628..2739739,2739874..2740019,2746717..2747460,2755503..2755605,2756257..2756400,2756539..2756666,2757258..2757345,2764567..2764676,2766123..2766314,2766533..2766770,2769173..2769267,2770788..2771021,2772080..2772227,2773095..2773242,2774590..2774746,2794926..2795079,2809418..2809696))
location: region:2710936-2809696:-1
so has part: feature:2809418-2809696:-1:exon
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urn:…
SIO_000300: 1
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SIO_000628: feature:2773095-2773242:-1:exon

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urn:…
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SIO_000628: feature:2723570-2725185:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2718546-2718740:-1:exon

position:2718546:-1
position: 2718546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:2717217-2717471:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2716077-2716252:-1:exon

urn:…
SIO_000300: 35
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SIO_000300: 36
SIO_000628: feature:2714523-2714569:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2711327-2711500:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2710936-2711156:-1:exon

LOC110471323
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110471323
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and KH domain-containing protein 1 isoform X7
translation: MLTDGTAAAAADEEIDSVAPRAPPAAAEPPAAAGPSPLGLRAVRLFGEAGPGGPGGPGAPAAAEAALDFKLAAAVLRSGGGGGSGSDEDEVSEVESFILDQEDLDNPVLKTTSELFLSSAAEGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSCALDEAAAALTRMRAENNHNNGQVDNRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAAASGGYVDIVKLLLVHCADVNAQSSTGNTALTYACAGGFVDVVKVLLKAGANIEDHNENGHTPLMEAASAGHVEVARVLLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLDSGAQVNMPADSFESPLTLAACGGHVELAALLIERGANLEEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFLIKAGADIELGCSTPLMEAAQEGHLELVKYLLAAGANVHATTATGDTALTYACENGHTDVADVLLQAGADLEHESEGGRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLACAGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTNVVSYLLDYPNNVLSVPAADLSQLTPPSQDQSQVPRVPVHTLAMVVPPQEPDRTPQENSPPLLGVVKGASKQKSSSLQVADKDLLPPFHPYQPLECIVEETEGKLNELGQRISAIEKAQLKSLELIQGEPLNKDKIEELKKNREEQVQKKKKILKELQKVERQLQMKTQQQFTKEYLETKGQTDTPPALQQQCSLTGVFPEVEANKGLPEDNFSGLPQVDTILSKDDEQHQSPPPAEQIEFVPIQPLPAPQCNFSGNLGYNGTESLELQKALGNQQNVGQQQQIAGQGLLVQEPDGLMVATPAQTLTDTLDDLIAAVNSRVPSGSTSSSHTTESPTPEPCPQAASNVPPQSVLPMYPSVDIDAHTESNHDTALTLACAGGHEELVSVLIARGANIEHRDKKGFTPLILAATAGHVGVVEILLDKGGDIEAQSERTKDTPLSLACSGGRQEVVDLLLARGANKEHRNVSDYTPLSLAASGGYVNIIKILLNAGAEINSRTGSKLGISPLMLAAMNGHVPAVKLLLDMGSDINAQIETNRNTALTLACFQGRAEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYAEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHYKFCELLINRGAHIDVRNKKGNTPLWLAANGGHYDVVQLLVQAGADVDAADNRKITPLMSAFRKGHVKVVQFLVKEVNQFPSDIECMRYIATITDKDLLKKCHQCVETIVKAKDQQAAEANKNATILLKELDLEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENKPKETLELQEDDDEEENDDEVEQEVPIEPPSATTTTTIGISATSTTFTNAFGKKRANVVTTPSTNRKNKKNKTKETPQNMQIILPDQHISLAQQKADKNKINGEPRGGGASGNSDSDNLDSTDCNSESSSGGKSQELNFTMDTNSSERRYASLLIPSQEEKNSTSASKTPTRREEVDDSEHFTCQVDGQFDITLSSQRLDGEGHSNSLSTTYKSVSLPLTSPNVKLNLTSPKRGQKREEGWKEVVRRQVGRVLKDPPPSNTLQPTPIEQFQLQRGGRCCSGAKRSKKLSVPASVVSRIMGRGGCNITAIQDVTGAHIDVDKQKDKNGERMITIRGGTESTRYAVQLINALIQDPAKELEDLIPKTHIRTPASSTKSIHANFSSGVSTATASNKNSFPLGAPPLVTSQSSTLSTFQPPNKLNKNVPANVRSSFPVSLPLAYSHPHFALLAAQTMQQIRHPRLPMAQFGGTFSPSPNTWGPFPVRPVNPGSTNSSPKHNSSSRVGSQNGSVLQTESPGLPTSSCPVTASSVAASTQPLC…
SIO_010081: LOC110471323
subclass of: SO_0000673
so part of: LOC110471323
location: complement(join(2711013..2711156,2711327..2711500,2715007..2715171,2716077..2716252,2717217..2717468,2723570..2725185,2725490..2725639,2727175..2727285,2728819..2728965,2729722..2729799,2730234..2730687,2731008..2731182,2732168..2732284,2732580..2732675,2733777..2733939,2734768..2734943,2736168..2736381,2737141..2737283,2738723..2738868,2739628..2739739,2739874..2740019,2746717..2747460,2755503..2755605,2756257..2756400,2756539..2756666,2757258..2757345,2764567..2764676,2766123..2766314,2766533..2766770,2769173..2769267,2770788..2771021,2772080..2772227,2773095..2773242,2774590..2774746,2794926..2795079,2809418..2809696))
location: region:2711013-2809696:-1
so has part: feature:2809418-2809696:-1:exon
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so has part: feature:2733777-2733939:-1:exon
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so has part: feature:2731008-2731182:-1:exon
so has part: feature:2730234-2730687:-1:exon
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so has part: feature:2728819-2728965:-1:exon
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so has part: feature:2717217-2717468:-1:exon
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so has part: feature:2715007-2715171:-1:exon
so has part: feature:2711327-2711500:-1:exon
so has part: feature:2711013-2711156:-1:exon

XP_021387560.1
type: Protein
SIO_000068: ncbiprotein

position:2711013:-1
position: 2711013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2809418-2809696:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2794926-2795079:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2774590-2774746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2773095-2773242:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2772080-2772227:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2770788-2771021:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2769173-2769267:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2766533-2766770:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2766123-2766314:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2764567-2764676:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2757258-2757345:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2756539-2756666:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2756257-2756400:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2755503-2755605:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2746717-2747460:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2739874-2740019:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2739628-2739739:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2738723-2738868:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2737141-2737283:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2736168-2736381:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2734768-2734943:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2733777-2733939:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2732580-2732675:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2732168-2732284:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2731008-2731182:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2730234-2730687:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2729722-2729799:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2728819-2728965:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2727175-2727285:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2725490-2725639:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2723570-2725185:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2717217-2717468:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2716077-2716252:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2715007-2715171:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2711327-2711500:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2711013-2711156:-1:exon

LOC110471323
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110471323
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and KH domain-containing protein 1 isoform X6
translation: MLTDGTAAAAADEEIDSVAPRAPPAAAEPPAAAGPSPLGLRAVRLFGEAGPGGPGGPGAPAAAEAALDFKLAAAVLRSGGGGGSGSDEDEVSEVESFILDQEDLDNPVLKTTSELFLSSAAEGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSCALDEAAAALTRMRAENNHNNGQVDNRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAAASGGYVDIVKLLLVHCADVNAQSSTGNTALTYACAGGFVDVVKVLLKAGANIEDHNENGHTPLMEAASAGHVEVARVLLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLDSGAQVNMPADSFESPLTLAACGGHVELAALLIERGANLEEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFLIKAGADIELGCSTPLMEAAQEGHLELVKYLLAAGANVHATTATGDTALTYACENGHTDVADVLLQAGADLEHESEGGRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLACAGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTNVVSYLLDYPNNVLSVPAADLSQLTPPSQDQSQVPRVPVHTLAMVVPPQEPDRTPQENSPPLLGVVKGASKQKSSSLQVADKDLLPPFHPYQPLECIVEETEGKLNELGQRISAIEKAQLKSLELIQGEPLNKDKIEELKKNREEQVQKKKKILKELQKVERQLQMKTQQQFTKEYLETKGQTDTPPALQQQCSLTGVFPEVEANKGLPEDNFSGLPQVDTILSKDDEQHQSPPPAEQIEFVPIQPLPAPQCNFSGNLGYNGTESLELQKALGNQQNVGQQQQIAGQGLLVQEPDGLMVATPAQTLTDTLDDLIAAVNSRVPSGSTSSSHTTESPTPEPCPQAASNVPPQSVLPMYPSVDIDAHTESNHDTALTLACAGGHEELVSVLIARGANIEHRDKKGFTPLILAATAGHVGVVEILLDKGGDIEAQSERTKDTPLSLACSGGRQEVVDLLLARGANKEHRNVSDYTPLSLAASGGYVNIIKILLNAGAEINSRTGSKLGISPLMLAAMNGHVPAVKLLLDMGSDINAQIETNRNTALTLACFQGRAEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYAEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHYKFCELLINRGAHIDVRNKKGNTPLWLAANGGHYDVVQLLVQAGADVDAADNRKITPLMSAFRKGHVKVVQFLVKEVNQFPSDIECMRYIATITDKDLLKKCHQCVETIVKAKDQQAAEANKNATILLKELDLEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENKPKETLELQEDDDEEENDDEVEQEVPIEPPSATTTTTIGISATSTTFTNAFGKKRANVVTTPSTNRKNKKNKTKETPQNMQIILPDQHISLAQQKADKNKINGEPRGGGASGNSDSDNLDSTDCNSESSSGGKSQELNFTMDTNSSERRYASLLIPSQEEKNSTSASKTPTRREEVDDSEHFTCQVDGQFDITLSSQRLDGEGHSNSLSTTYKSVSLPLTSPNVKLNLTSPKRGQKREEGWKEVVRRQVGRVLKDPPPSNTLQPTPIEQFQLQRGGRCCSGAKRSKKLSVPASVVSRIMGRGGCNITAIQDVTGAHIDVDKQKDKNGERMITIRGGTESTRYAVQLINALIQDPAKELEDLIPKTHIRTPASSTKSIHANFSSGVSTATASNKNSFPLGAPPLVTSQSSTLSTFQPPNKLNKNVPANVRSSFPVSLPLAYSHPHFALLAAQTMQQIRHPRLPMAQFGGTFSPSPNTWGPFPVRPVNPGSTNSSPKHNSSSRVGSQNGSVLQTESPGLPTSSCPVTASSVAASTQPLC…
SIO_010081: LOC110471323
subclass of: SO_0000673
so part of: LOC110471323
location: complement(join(2711013..2711156,2711327..2711500,2715007..2715171,2716077..2716252,2717217..2717471,2723570..2725185,2725490..2725639,2727175..2727285,2728819..2728965,2729722..2729799,2730234..2730687,2731008..2731182,2732168..2732284,2732580..2732675,2733777..2733939,2734768..2734943,2736168..2736381,2737141..2737283,2738723..2738868,2739628..2739739,2739874..2740019,2746717..2747460,2755503..2755605,2756257..2756400,2756539..2756666,2757258..2757345,2764567..2764676,2766123..2766314,2766533..2766770,2769173..2769267,2770788..2771021,2772080..2772227,2773095..2773242,2774590..2774746,2794926..2795079,2809418..2809696))
location: region:2711013-2809696:-1
so has part: feature:2809418-2809696:-1:exon
so has part: feature:2794926-2795079:-1:exon
so has part: feature:2774590-2774746:-1:exon
so has part: feature:2773095-2773242:-1:exon
so has part: feature:2772080-2772227:-1:exon
so has part: feature:2770788-2771021:-1:exon
so has part: feature:2769173-2769267:-1:exon
so has part: feature:2766533-2766770:-1:exon
so has part: feature:2766123-2766314:-1:exon
so has part: feature:2764567-2764676:-1:exon
so has part: feature:2757258-2757345:-1:exon
so has part: feature:2756539-2756666:-1:exon
so has part: feature:2756257-2756400:-1:exon
so has part: feature:2755503-2755605:-1:exon
so has part: feature:2746717-2747460:-1:exon
so has part: feature:2739874-2740019:-1:exon
so has part: feature:2739628-2739739:-1:exon
so has part: feature:2738723-2738868:-1:exon
so has part: feature:2737141-2737283:-1:exon
so has part: feature:2736168-2736381:-1:exon
so has part: feature:2734768-2734943:-1:exon
so has part: feature:2733777-2733939:-1:exon
so has part: feature:2732580-2732675:-1:exon
so has part: feature:2732168-2732284:-1:exon
so has part: feature:2731008-2731182:-1:exon
so has part: feature:2730234-2730687:-1:exon
so has part: feature:2729722-2729799:-1:exon
so has part: feature:2728819-2728965:-1:exon
so has part: feature:2727175-2727285:-1:exon
so has part: feature:2725490-2725639:-1:exon
so has part: feature:2723570-2725185:-1:exon
so has part: feature:2717217-2717471:-1:exon
so has part: feature:2716077-2716252:-1:exon
so has part: feature:2715007-2715171:-1:exon
so has part: feature:2711327-2711500:-1:exon
so has part: feature:2711013-2711156:-1:exon

XP_021387559.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2809418-2809696:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2794926-2795079:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2774590-2774746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2773095-2773242:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2772080-2772227:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2770788-2771021:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2769173-2769267:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2766533-2766770:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2766123-2766314:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2764567-2764676:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2757258-2757345:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2756539-2756666:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2756257-2756400:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2755503-2755605:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2746717-2747460:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2739874-2740019:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2739628-2739739:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2738723-2738868:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2737141-2737283:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2736168-2736381:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2734768-2734943:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2733777-2733939:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2732580-2732675:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2732168-2732284:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2731008-2731182:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2730234-2730687:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2729722-2729799:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2728819-2728965:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2727175-2727285:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2725490-2725639:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2723570-2725185:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2717217-2717471:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2716077-2716252:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2715007-2715171:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2711327-2711500:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2711013-2711156:-1:exon

LOC110471323
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110471323
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and KH domain-containing protein 1 isoform X3
translation: MLTDGTAAAAADEEIDSVAPRAPPAAAEPPAAAGPSPLGLRAVRLFGEAGPGGPGGPGAPAAAEAALDFKLAAAVLRSGGGGGSGSDEDEVSEVESFILDQEDLDNPVLKTTSELFLSSAAEGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSCALDEAAAALTRMRAENNHNNGQVDNRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAAASGGYVDIVKLLLVHCADVNAQSSTGNTALTYACAGGFVDVVKVLLKAGANIEDHNENGHTPLMEAASAGHVEVARVLLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLDSGAQVNMPADSFESPLTLAACGGHVELAALLIERGANLEEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFLIKAGADIELGCSTPLMEAAQEGHLELVKYLLAAGANVHATTATGDTALTYACENGHTDVADVLLQAGADLEHESEGGRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLACAGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTNVVSYLLDYPNNVLSVPAADLSQLTPPSQDQSQVPRVPVHTLAMVVPPQEPDRTPQENSPPLLGVVKGASKQKSSSLQVADKDLLPPFHPYQPLECIVEETEGKLNELGQRISAIEKAQLKSLELIQGEPLNKDKIEELKKNREEQVQKKKKILKELQKVERQLQMKTQQQFTKEYLETKGQTDTPPALQQQCSLTGVFPEVEANKGLPEDNFSGLPQVDTILSKDDEQHQSPPPAEQIEFVPIQPLPAPQCNFSGNLGYNGTESLELQKALGNQQNVGQQQQIAGQGLLVQEPDGLMVATPAQTLTDTLDDLIAAVNSRVPSGSTSSSHTTESPTPEPCPQAASNVPPQSVLPMYPSVDIDAHTESNHDTALTLACAGGHEELVSVLIARGANIEHRDKKGFTPLILAATAGHVGVVEILLDKGGDIEAQSERTKDTPLSLACSGGRQEVVDLLLARGANKEHRNVSDYTPLSLAASGGYVNIIKILLNAGAEINSRTGSKLGISPLMLAAMNGHVPAVKLLLDMGSDINAQIETNRNTALTLACFQGRAEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYAEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHYKFCELLINRGAHIDVRNKKGNTPLWLAANGGHYDVVQLLVQAGADVDAADNRKITPLMSAFRKGHVKVVQFLVKEVNQFPSDIECMRYIATITDKDLLKKCHQCVETIVKAKDQQAAEANKNATILLKELDLEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENKPKETLELQEDDDEEENDDEVEQEVPIEPPSATTTTTIGISATSTTFTNAFGKKRANVVTTPSTNRKNKKNKTKETPQNMQIILPDQHISLAQQKADKNKINGEPRGGGASGNSDSDNLDSTDCNSESSSGGKSQELNFTMDTNSSERRYASLLIPSQEEKNSTSASKTPTRREEVDDSEHFTCQVDGQFDITLSSQRLDGEGHSNSLSTTYKSVSLPLTSPNVKLNLTSPKRGQKREEGWKEVVRRQVGRVLKDPPPSNTLQPTPIEQFQLQRGGRCCSGAKRSKKLSVPASVVSRIMGRGGCNITAIQDVTGAHIDVDKQKDKNGERMITIRGGTESTRYAVQLINALIQDPAKELEDLIPKTHIRTPASSTKSIHANFSSGVSTATASNKNSFPLGAPPLVTSQSSTLSTFQPPNKLNKNVPANVRSSFPVSLPLAYSHPHFALLAAQTMQQIRHPRLPMAQFGGTFSPSPNTWGPFPVRPVNPGSTNSSPKHNSSSRVGSQNGSVLQTESPGLPTSSCPVTASSVAASTQPLC…
SIO_010081: LOC110471323
subclass of: SO_0000673
so part of: LOC110471323
location: complement(join(2711013..2711156,2711327..2711500,2715007..2715171,2716077..2716252,2717217..2717447,2718561..2718740,2723570..2725185,2725490..2725639,2727175..2727285,2728819..2728965,2729722..2729799,2730234..2730687,2731008..2731182,2732168..2732284,2732580..2732675,2733777..2733939,2734768..2734943,2736168..2736381,2737141..2737283,2738723..2738868,2739628..2739739,2739874..2740019,2746717..2747460,2755503..2755605,2756257..2756400,2756539..2756666,2757258..2757345,2764567..2764676,2766123..2766314,2766533..2766770,2769173..2769267,2770788..2771021,2772080..2772227,2773095..2773242,2774590..2774746,2794926..2795079,2809418..2809696))
location: region:2711013-2809696:-1
so has part: feature:2809418-2809696:-1:exon
so has part: feature:2794926-2795079:-1:exon
so has part: feature:2774590-2774746:-1:exon
so has part: feature:2773095-2773242:-1:exon
so has part: feature:2772080-2772227:-1:exon
so has part: feature:2770788-2771021:-1:exon
so has part: feature:2769173-2769267:-1:exon
so has part: feature:2766533-2766770:-1:exon
so has part: feature:2766123-2766314:-1:exon
so has part: feature:2764567-2764676:-1:exon
so has part: feature:2757258-2757345:-1:exon
so has part: feature:2756539-2756666:-1:exon
so has part: feature:2756257-2756400:-1:exon
so has part: feature:2755503-2755605:-1:exon
so has part: feature:2746717-2747460:-1:exon
so has part: feature:2739874-2740019:-1:exon
so has part: feature:2739628-2739739:-1:exon
so has part: feature:2738723-2738868:-1:exon
so has part: feature:2737141-2737283:-1:exon
so has part: feature:2736168-2736381:-1:exon
so has part: feature:2734768-2734943:-1:exon
so has part: feature:2733777-2733939:-1:exon
so has part: feature:2732580-2732675:-1:exon
so has part: feature:2732168-2732284:-1:exon
so has part: feature:2731008-2731182:-1:exon
so has part: feature:2730234-2730687:-1:exon
so has part: feature:2729722-2729799:-1:exon
so has part: feature:2728819-2728965:-1:exon
so has part: feature:2727175-2727285:-1:exon
so has part: feature:2725490-2725639:-1:exon
so has part: feature:2723570-2725185:-1:exon
so has part: feature:2718561-2718740:-1:exon
so has part: feature:2717217-2717447:-1:exon
so has part: feature:2716077-2716252:-1:exon
so has part: feature:2715007-2715171:-1:exon
so has part: feature:2711327-2711500:-1:exon
so has part: feature:2711013-2711156:-1:exon

XP_021387555.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2809418-2809696:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2794926-2795079:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2774590-2774746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2773095-2773242:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2772080-2772227:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2770788-2771021:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2769173-2769267:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2766533-2766770:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2766123-2766314:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2764567-2764676:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2757258-2757345:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2756539-2756666:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2756257-2756400:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2755503-2755605:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2746717-2747460:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2739874-2740019:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2739628-2739739:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2738723-2738868:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2737141-2737283:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2736168-2736381:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2734768-2734943:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2733777-2733939:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2732580-2732675:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2732168-2732284:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2731008-2731182:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2730234-2730687:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2729722-2729799:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2728819-2728965:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2727175-2727285:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2725490-2725639:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2723570-2725185:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2718561-2718740:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2717217-2717447:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2716077-2716252:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2715007-2715171:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2711327-2711500:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2711013-2711156:-1:exon

LOC110471323
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110471323
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and KH domain-containing protein 1 isoform X2
translation: MLTDGTAAAAADEEIDSVAPRAPPAAAEPPAAAGPSPLGLRAVRLFGEAGPGGPGGPGAPAAAEAALDFKLAAAVLRSGGGGGSGSDEDEVSEVESFILDQEDLDNPVLKTTSELFLSSAAEGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSCALDEAAAALTRMRAENNHNNGQVDNRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAAASGGYVDIVKLLLVHCADVNAQSSTGNTALTYACAGGFVDVVKVLLKAGANIEDHNENGHTPLMEAASAGHVEVARVLLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLDSGAQVNMPADSFESPLTLAACGGHVELAALLIERGANLEEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFLIKAGADIELGCSTPLMEAAQEGHLELVKYLLAAGANVHATTATGDTALTYACENGHTDVADVLLQAGADLEHESEGGRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLACAGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTNVVSYLLDYPNNVLSVPAADLSQLTPPSQDQSQVPRVPVHTLAMVVPPQEPDRTPQENSPPLLGVVKGASKQKSSSLQVADKDLLPPFHPYQPLECIVEETEGKLNELGQRISAIEKAQLKSLELIQGEPLNKDKIEELKKNREEQVQKKKKILKELQKVERQLQMKTQQQFTKEYLETKGQTDTPPALQQQCSLTGVFPEVEANKGLPEDNFSGLPQVDTILSKDDEQHQSPPPAEQIEFVPIQPLPAPQCNFSGNLGYNGTESLELQKALGNQQNVGQQQQIAGQGLLVQEPDGLMVATPAQTLTDTLDDLIAAVNSRVPSGSTSSSHTTESPTPEPCPQAASNVPPQSVLPMYPSVDIDAHTESNHDTALTLACAGGHEELVSVLIARGANIEHRDKKGFTPLILAATAGHVGVVEILLDKGGDIEAQSERTKDTPLSLACSGGRQEVVDLLLARGANKEHRNVSDYTPLSLAASGGYVNIIKILLNAGAEINSRTGSKLGISPLMLAAMNGHVPAVKLLLDMGSDINAQIETNRNTALTLACFQGRAEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYAEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHYKFCELLINRGAHIDVRNKKGNTPLWLAANGGHYDVVQLLVQAGADVDAADNRKITPLMSAFRKGHVKVVQFLVKEVNQFPSDIECMRYIATITDKDLLKKCHQCVETIVKAKDQQAAEANKNATILLKELDLEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENKPKETLELQEDDDEEENDDEVEQEVPIEPPSATTTTTIGISATSTTFTNAFGKKRANVVTTPSTNRKNKKNKTKETPQNMQIILPDQHISLAQQKADKNKINGEPRGGGASGNSDSDNLDSTDCNSESSSGGKSQELNFTMDTNSSERRYASLLIPSQEEKNSTSASKTPTRREEVDDSEHFTCQVDGQFDITLSSQRLDGEGHSNSLSTTYKSVSLPLTSPNVKLNLTSPKRGQKREEGWKEVVRRQVGRVLKDPPPSNTLQPTPIEQFQLQRGGRCCSGAKRSKKLSVPASVVSRIMGRGGCNITAIQDVTGAHIDVDKQKDKNGERMITIRGGTESTRYAVQLINALIQDPAKELEDLIPKTHIRTPASSTKSIHANFSSGVSTATASNKNSFPLGAPPLVTSQSSTLSTFQPPNKLNKNVPANVRSSFPVSLPLAYSHPHFALLAAQTMQQIRHPRLPMAQFGGTFSPSPNTWGPFPVRPVNPGSTNSSPKHNSSSRVGSQNGSVLQTESPGLPTSSCPVTASSVAASTQPLC…
SIO_010081: LOC110471323
subclass of: SO_0000673
so part of: LOC110471323
location: complement(join(2711013..2711156,2711327..2711500,2715007..2715171,2716077..2716252,2717217..2717468,2718561..2718740,2723570..2725185,2725490..2725639,2727175..2727285,2728819..2728965,2729722..2729799,2730234..2730687,2731008..2731182,2732168..2732284,2732580..2732675,2733777..2733939,2734768..2734943,2736168..2736381,2737141..2737283,2738723..2738868,2739628..2739739,2739874..2740019,2746717..2747460,2755503..2755605,2756257..2756400,2756539..2756666,2757258..2757345,2764567..2764676,2766123..2766314,2766533..2766770,2769173..2769267,2770788..2771021,2772080..2772227,2773095..2773242,2774590..2774746,2794926..2795079,2809418..2809696))
location: region:2711013-2809696:-1
so has part: feature:2809418-2809696:-1:exon
so has part: feature:2794926-2795079:-1:exon
so has part: feature:2774590-2774746:-1:exon
so has part: feature:2773095-2773242:-1:exon
so has part: feature:2772080-2772227:-1:exon
so has part: feature:2770788-2771021:-1:exon
so has part: feature:2769173-2769267:-1:exon
so has part: feature:2766533-2766770:-1:exon
so has part: feature:2766123-2766314:-1:exon
so has part: feature:2764567-2764676:-1:exon
so has part: feature:2757258-2757345:-1:exon
so has part: feature:2756539-2756666:-1:exon
so has part: feature:2756257-2756400:-1:exon
so has part: feature:2755503-2755605:-1:exon
so has part: feature:2746717-2747460:-1:exon
so has part: feature:2739874-2740019:-1:exon
so has part: feature:2739628-2739739:-1:exon
so has part: feature:2738723-2738868:-1:exon
so has part: feature:2737141-2737283:-1:exon
so has part: feature:2736168-2736381:-1:exon
so has part: feature:2734768-2734943:-1:exon
so has part: feature:2733777-2733939:-1:exon
so has part: feature:2732580-2732675:-1:exon
so has part: feature:2732168-2732284:-1:exon
so has part: feature:2731008-2731182:-1:exon
so has part: feature:2730234-2730687:-1:exon
so has part: feature:2729722-2729799:-1:exon
so has part: feature:2728819-2728965:-1:exon
so has part: feature:2727175-2727285:-1:exon
so has part: feature:2725490-2725639:-1:exon
so has part: feature:2723570-2725185:-1:exon
so has part: feature:2718561-2718740:-1:exon
so has part: feature:2717217-2717468:-1:exon
so has part: feature:2716077-2716252:-1:exon
so has part: feature:2715007-2715171:-1:exon
so has part: feature:2711327-2711500:-1:exon
so has part: feature:2711013-2711156:-1:exon

XP_021387554.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2809418-2809696:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2794926-2795079:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2774590-2774746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2773095-2773242:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2772080-2772227:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2770788-2771021:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2769173-2769267:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2766533-2766770:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2766123-2766314:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2764567-2764676:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2757258-2757345:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2756539-2756666:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2756257-2756400:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2755503-2755605:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2746717-2747460:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2739874-2740019:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2739628-2739739:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2738723-2738868:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2737141-2737283:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2736168-2736381:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2734768-2734943:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2733777-2733939:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2732580-2732675:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2732168-2732284:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2731008-2731182:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2730234-2730687:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2729722-2729799:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2728819-2728965:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2727175-2727285:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2725490-2725639:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2723570-2725185:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2718561-2718740:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2717217-2717468:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2716077-2716252:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2715007-2715171:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2711327-2711500:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2711013-2711156:-1:exon

LOC110471323
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110471323
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and KH domain-containing protein 1 isoform X1
translation: MLTDGTAAAAADEEIDSVAPRAPPAAAEPPAAAGPSPLGLRAVRLFGEAGPGGPGGPGAPAAAEAALDFKLAAAVLRSGGGGGSGSDEDEVSEVESFILDQEDLDNPVLKTTSELFLSSAAEGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSCALDEAAAALTRMRAENNHNNGQVDNRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAAASGGYVDIVKLLLVHCADVNAQSSTGNTALTYACAGGFVDVVKVLLKAGANIEDHNENGHTPLMEAASAGHVEVARVLLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLDSGAQVNMPADSFESPLTLAACGGHVELAALLIERGANLEEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFLIKAGADIELGCSTPLMEAAQEGHLELVKYLLAAGANVHATTATGDTALTYACENGHTDVADVLLQAGADLEHESEGGRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLACAGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTNVVSYLLDYPNNVLSVPAADLSQLTPPSQDQSQVPRVPVHTLAMVVPPQEPDRTPQENSPPLLGVVKGASKQKSSSLQVADKDLLPPFHPYQPLECIVEETEGKLNELGQRISAIEKAQLKSLELIQGEPLNKDKIEELKKNREEQVQKKKKILKELQKVERQLQMKTQQQFTKEYLETKGQTDTPPALQQQCSLTGVFPEVEANKGLPEDNFSGLPQVDTILSKDDEQHQSPPPAEQIEFVPIQPLPAPQCNFSGNLGYNGTESLELQKALGNQQNVGQQQQIAGQGLLVQEPDGLMVATPAQTLTDTLDDLIAAVNSRVPSGSTSSSHTTESPTPEPCPQAASNVPPQSVLPMYPSVDIDAHTESNHDTALTLACAGGHEELVSVLIARGANIEHRDKKGFTPLILAATAGHVGVVEILLDKGGDIEAQSERTKDTPLSLACSGGRQEVVDLLLARGANKEHRNVSDYTPLSLAASGGYVNIIKILLNAGAEINSRTGSKLGISPLMLAAMNGHVPAVKLLLDMGSDINAQIETNRNTALTLACFQGRAEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYAEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHYKFCELLINRGAHIDVRNKKGNTPLWLAANGGHYDVVQLLVQAGADVDAADNRKITPLMSAFRKGHVKVVQFLVKEVNQFPSDIECMRYIATITDKDLLKKCHQCVETIVKAKDQQAAEANKNATILLKELDLEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENKPKETLELQEDDDEEENDDEVEQEVPIEPPSATTTTTIGISATSTTFTNAFGKKRANVVTTPSTNRKNKKNKTKETPQNMQIILPDQHISLAQQKADKNKINGEPRGGGASGNSDSDNLDSTDCNSESSSGGKSQELNFTMDTNSSERRYASLLIPSQEEKNSTSASKTPTRREEVDDSEHFTCQVDGQFDITLSSQRLDGEGHSNSLSTTYKSVSLPLTSPNVKLNLTSPKRGQKREEGWKEVVRRQVGRVLKDPPPSNTLQPTPIEQFQLQRGGRCCSGAKRSKKLSVPASVVSRIMGRGGCNITAIQDVTGAHIDVDKQKDKNGERMITIRGGTESTRYAVQLINALIQDPAKELEDLIPKTHIRTPASSTKSIHANFSSGVSTATASNKNSFPLGAPPLVTSQSSTLSTFQPPNKLNKNVPANVRSSFPVSLPLAYSHPHFALLAAQTMQQIRHPRLPMAQFGGTFSPSPNTWGPFPVRPVNPGSTNSSPKHNSSSRVGSQNGSVLQTESPGLPTSSCPVTASSVAASTQPLC…
SIO_010081: LOC110471323
subclass of: SO_0000673
so part of: LOC110471323
location: complement(join(2711013..2711156,2711327..2711500,2715007..2715171,2716077..2716252,2717217..2717471,2718561..2718740,2723570..2725185,2725490..2725639,2727175..2727285,2728819..2728965,2729722..2729799,2730234..2730687,2731008..2731182,2732168..2732284,2732580..2732675,2733777..2733939,2734768..2734943,2736168..2736381,2737141..2737283,2738723..2738868,2739628..2739739,2739874..2740019,2746717..2747460,2755503..2755605,2756257..2756400,2756539..2756666,2757258..2757345,2764567..2764676,2766123..2766314,2766533..2766770,2769173..2769267,2770788..2771021,2772080..2772227,2773095..2773242,2774590..2774746,2794926..2795079,2809418..2809696))
location: region:2711013-2809696:-1
so has part: feature:2809418-2809696:-1:exon
so has part: feature:2794926-2795079:-1:exon
so has part: feature:2774590-2774746:-1:exon
so has part: feature:2773095-2773242:-1:exon
so has part: feature:2772080-2772227:-1:exon
so has part: feature:2770788-2771021:-1:exon
so has part: feature:2769173-2769267:-1:exon
so has part: feature:2766533-2766770:-1:exon
so has part: feature:2766123-2766314:-1:exon
so has part: feature:2764567-2764676:-1:exon
so has part: feature:2757258-2757345:-1:exon
so has part: feature:2756539-2756666:-1:exon
so has part: feature:2756257-2756400:-1:exon
so has part: feature:2755503-2755605:-1:exon
so has part: feature:2746717-2747460:-1:exon
so has part: feature:2739874-2740019:-1:exon
so has part: feature:2739628-2739739:-1:exon
so has part: feature:2738723-2738868:-1:exon
so has part: feature:2737141-2737283:-1:exon
so has part: feature:2736168-2736381:-1:exon
so has part: feature:2734768-2734943:-1:exon
so has part: feature:2733777-2733939:-1:exon
so has part: feature:2732580-2732675:-1:exon
so has part: feature:2732168-2732284:-1:exon
so has part: feature:2731008-2731182:-1:exon
so has part: feature:2730234-2730687:-1:exon
so has part: feature:2729722-2729799:-1:exon
so has part: feature:2728819-2728965:-1:exon
so has part: feature:2727175-2727285:-1:exon
so has part: feature:2725490-2725639:-1:exon
so has part: feature:2723570-2725185:-1:exon
so has part: feature:2718561-2718740:-1:exon
so has part: feature:2717217-2717471:-1:exon
so has part: feature:2716077-2716252:-1:exon
so has part: feature:2715007-2715171:-1:exon
so has part: feature:2711327-2711500:-1:exon
so has part: feature:2711013-2711156:-1:exon

XP_021387553.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2809418-2809696:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2794926-2795079:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2774590-2774746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2773095-2773242:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2772080-2772227:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2770788-2771021:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2769173-2769267:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2766533-2766770:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2766123-2766314:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2764567-2764676:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2757258-2757345:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2756539-2756666:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2756257-2756400:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2755503-2755605:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2746717-2747460:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2739874-2740019:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2739628-2739739:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2738723-2738868:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2737141-2737283:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2736168-2736381:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2734768-2734943:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2733777-2733939:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2732580-2732675:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2732168-2732284:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2731008-2731182:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2730234-2730687:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2729722-2729799:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2728819-2728965:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2727175-2727285:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2725490-2725639:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2723570-2725185:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2718561-2718740:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2717217-2717471:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2716077-2716252:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2715007-2715171:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2711327-2711500:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2711013-2711156:-1:exon

LOC110471323
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110471323
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and KH domain-containing protein 1 isoform X5
translation: MLTDGTAAAAADEEIDSVAPRAPPAAAEPPAAAGPSPLGLRAVRLFGEAGPGGPGGPGAPAAAEAALDFKLAAAVLRSGGGGGSGSDEDEVSEVESFILDQEDLDNPVLKTTSELFLSSAAEGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSCALDEAAAALTRMRAENNHNNGQVDNRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAAASGGYVDIVKLLLVHCADVNAQSSTGNTALTYACAGGFVDVVKVLLKAGANIEDHNENGHTPLMEAASAGHVEVARVLLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLDSGAQVNMPADSFESPLTLAACGGHVELAALLIERGANLEEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFLIKAGADIELGCSTPLMEAAQEGHLELVKYLLAAGANVHATTATGDTALTYACENGHTDVADVLLQAGADLEHESEGGRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLACAGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTNVVSYLLDYPNNVLSVPAADLSQLTPPSQDQSQVPRVPVHTLAMVVPPQEPDRTPQENSPPLLGVVKGASKQKSSSLQVADKDLLPPFHPYQPLECIVEETEGKLNELGQRISAIEKAQLKSLELIQGEPLNKDKIEELKKNREEQVQKKKKILKELQKVERQLQMKTQQQFTKEYLETKGQTDTPPALQQQCSLTGVFPEVEANKGLPEDNFSGLPQVDTILSKDDEQHQSPPPAEQIEFVPIQPLPAPQCNFSGNLGYNGTESLELQKALGNQQNVGQQQQIAGQGLLVQEPDGLMVATPAQTLTDTLDDLIAAVNSRVPSGSTSSSHTTESPTPEPCPQAASNVPPQSVLPMYPSVDIDAHTESNHDTALTLACAGGHEELVSVLIARGANIEHRDKKGFTPLILAATAGHVGVVEILLDKGGDIEAQSERTKDTPLSLACSGGRQEVVDLLLARGANKEHRNVSDYTPLSLAASGGYVNIIKILLNAGAEINSRTGSKLGISPLMLAAMNGHVPAVKLLLDMGSDINAQIETNRNTALTLACFQGRAEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYAEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHYKFCELLINRGAHIDVRNKKGNTPLWLAANGGHYDVVQLLVQAGADVDAADNRKITPLMSAFRKGHVKVVQFLVKEVNQFPSDIECMRYIATITDKDLLKKCHQCVETIVKAKDQQAAEANKNATILLKELDLEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENKPKETLELQEDDDEEENDDEVEQEVPIEPPSATTTTTIGISATSTTFTNAFGKKRANVVTTPSTNRKNKKNKTKETPQNMQIILPDQHISLAQQKADKNKINGEPRGGGASGNSDSDNLDSTDCNSESSSGGKSQELNFTMDTNSSERRYASLLIPSQEEKNSTSASKTPTRREEVDDSEHFTCQVDGQFDITLSSQRLDGEGHSNSLSTTYKSVSLPLTSPNVKLNLTSPKRGQKREEGWKEVVRRQVGRVLKDPPPSNTLQPTPIEQFQLQRGGRCCSGAKRSKKLSVPASVVSRIMGRGGCNITAIQDVTGAHIDVDKQKDKNGERMITIRGGTESTRYAVQLINALIQDPAKELEDLIPKTHIRTPASSTKSIHANFSSGVSTATASNKNSFPLGAPPLVTSQSSTLSTFQPPNKLNKNVPANVRSSFPVSLPLAYSHPHFALLAAQTMQQIRHPRLPMAQFGGTFSPSPNTWGPFPVRPVNPGSTNSSPKHNSSSRVGSQNGSVLQTESPGLPTSSCPVTASSVAASTQPLC…
SIO_010081: LOC110471323
subclass of: SO_0000673
so part of: LOC110471323
location: complement(join(2711347..2711500,2714523..2714569,2715007..2715171,2716077..2716252,2717217..2717468,2718561..2718740,2723570..2725185,2725490..2725639,2727175..2727285,2728819..2728965,2729722..2729799,2730234..2730687,2731008..2731182,2732168..2732284,2732580..2732675,2733777..2733939,2734768..2734943,2736168..2736381,2737141..2737283,2738723..2738868,2739628..2739739,2739874..2740019,2746717..2747460,2755503..2755605,2756257..2756400,2756539..2756666,2757258..2757345,2764567..2764676,2766123..2766314,2766533..2766770,2769173..2769267,2770788..2771021,2772080..2772227,2773095..2773242,2774590..2774746,2794926..2795079,2809418..2809696))
location: region:2711347-2809696:-1
so has part: feature:2809418-2809696:-1:exon
so has part: feature:2794926-2795079:-1:exon
so has part: feature:2774590-2774746:-1:exon
so has part: feature:2773095-2773242:-1:exon
so has part: feature:2772080-2772227:-1:exon
so has part: feature:2770788-2771021:-1:exon
so has part: feature:2769173-2769267:-1:exon
so has part: feature:2766533-2766770:-1:exon
so has part: feature:2766123-2766314:-1:exon
so has part: feature:2764567-2764676:-1:exon
so has part: feature:2757258-2757345:-1:exon
so has part: feature:2756539-2756666:-1:exon
so has part: feature:2756257-2756400:-1:exon
so has part: feature:2755503-2755605:-1:exon
so has part: feature:2746717-2747460:-1:exon
so has part: feature:2739874-2740019:-1:exon
so has part: feature:2739628-2739739:-1:exon
so has part: feature:2738723-2738868:-1:exon
so has part: feature:2737141-2737283:-1:exon
so has part: feature:2736168-2736381:-1:exon
so has part: feature:2734768-2734943:-1:exon
so has part: feature:2733777-2733939:-1:exon
so has part: feature:2732580-2732675:-1:exon
so has part: feature:2732168-2732284:-1:exon
so has part: feature:2731008-2731182:-1:exon
so has part: feature:2730234-2730687:-1:exon
so has part: feature:2729722-2729799:-1:exon
so has part: feature:2728819-2728965:-1:exon
so has part: feature:2727175-2727285:-1:exon
so has part: feature:2725490-2725639:-1:exon
so has part: feature:2723570-2725185:-1:exon
so has part: feature:2718561-2718740:-1:exon
so has part: feature:2717217-2717468:-1:exon
so has part: feature:2716077-2716252:-1:exon
so has part: feature:2715007-2715171:-1:exon
so has part: feature:2714523-2714569:-1:exon
so has part: feature:2711347-2711500:-1:exon

XP_021387558.1
type: Protein
SIO_000068: ncbiprotein

position:2711347:-1
position: 2711347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2809418-2809696:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2794926-2795079:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2774590-2774746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2773095-2773242:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2772080-2772227:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2770788-2771021:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2769173-2769267:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2766533-2766770:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2766123-2766314:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2764567-2764676:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2757258-2757345:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2756539-2756666:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2756257-2756400:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2755503-2755605:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2746717-2747460:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2739874-2740019:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2739628-2739739:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2738723-2738868:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2737141-2737283:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2736168-2736381:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2734768-2734943:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2733777-2733939:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2732580-2732675:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2732168-2732284:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2731008-2731182:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2730234-2730687:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2729722-2729799:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2728819-2728965:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2727175-2727285:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2725490-2725639:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2723570-2725185:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2718561-2718740:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2717217-2717468:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2716077-2716252:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2715007-2715171:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2714523-2714569:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2711347-2711500:-1:exon

LOC110471323
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110471323
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and KH domain-containing protein 1 isoform X4
translation: MLTDGTAAAAADEEIDSVAPRAPPAAAEPPAAAGPSPLGLRAVRLFGEAGPGGPGGPGAPAAAEAALDFKLAAAVLRSGGGGGSGSDEDEVSEVESFILDQEDLDNPVLKTTSELFLSSAAEGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSCALDEAAAALTRMRAENNHNNGQVDNRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAAASGGYVDIVKLLLVHCADVNAQSSTGNTALTYACAGGFVDVVKVLLKAGANIEDHNENGHTPLMEAASAGHVEVARVLLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLDSGAQVNMPADSFESPLTLAACGGHVELAALLIERGANLEEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFLIKAGADIELGCSTPLMEAAQEGHLELVKYLLAAGANVHATTATGDTALTYACENGHTDVADVLLQAGADLEHESEGGRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLACAGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTNVVSYLLDYPNNVLSVPAADLSQLTPPSQDQSQVPRVPVHTLAMVVPPQEPDRTPQENSPPLLGVVKGASKQKSSSLQVADKDLLPPFHPYQPLECIVEETEGKLNELGQRISAIEKAQLKSLELIQGEPLNKDKIEELKKNREEQVQKKKKILKELQKVERQLQMKTQQQFTKEYLETKGQTDTPPALQQQCSLTGVFPEVEANKGLPEDNFSGLPQVDTILSKDDEQHQSPPPAEQIEFVPIQPLPAPQCNFSGNLGYNGTESLELQKALGNQQNVGQQQQIAGQGLLVQEPDGLMVATPAQTLTDTLDDLIAAVNSRVPSGSTSSSHTTESPTPEPCPQAASNVPPQSVLPMYPSVDIDAHTESNHDTALTLACAGGHEELVSVLIARGANIEHRDKKGFTPLILAATAGHVGVVEILLDKGGDIEAQSERTKDTPLSLACSGGRQEVVDLLLARGANKEHRNVSDYTPLSLAASGGYVNIIKILLNAGAEINSRTGSKLGISPLMLAAMNGHVPAVKLLLDMGSDINAQIETNRNTALTLACFQGRAEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYAEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHYKFCELLINRGAHIDVRNKKGNTPLWLAANGGHYDVVQLLVQAGADVDAADNRKITPLMSAFRKGHVKVVQFLVKEVNQFPSDIECMRYIATITDKDLLKKCHQCVETIVKAKDQQAAEANKNATILLKELDLEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENKPKETLELQEDDDEEENDDEVEQEVPIEPPSATTTTTIGISATSTTFTNAFGKKRANVVTTPSTNRKNKKNKTKETPQNMQIILPDQHISLAQQKADKNKINGEPRGGGASGNSDSDNLDSTDCNSESSSGGKSQELNFTMDTNSSERRYASLLIPSQEEKNSTSASKTPTRREEVDDSEHFTCQVDGQFDITLSSQRLDGEGHSNSLSTTYKSVSLPLTSPNVKLNLTSPKRGQKREEGWKEVVRRQVGRVLKDPPPSNTLQPTPIEQFQLQRGGRCCSGAKRSKKLSVPASVVSRIMGRGGCNITAIQDVTGAHIDVDKQKDKNGERMITIRGGTESTRYAVQLINALIQDPAKELEDLIPKTHIRTPASSTKSIHANFSSGVSTATASNKNSFPLGAPPLVTSQSSTLSTFQPPNKLNKNVPANVRSSFPVSLPLAYSHPHFALLAAQTMQQIRHPRLPMAQFGGTFSPSPNTWGPFPVRPVNPGSTNSSPKHNSSSRVGSQNGSVLQTESPGLPTSSCPVTASSVAASTQPLC…
SIO_010081: LOC110471323
subclass of: SO_0000673
so part of: LOC110471323
location: complement(join(2711347..2711500,2714523..2714569,2715007..2715171,2716077..2716252,2717217..2717471,2718546..2718740,2723570..2725185,2725490..2725639,2727175..2727285,2728819..2728965,2729722..2729799,2730234..2730687,2731008..2731182,2732168..2732284,2732580..2732675,2733777..2733939,2734768..2734943,2736168..2736381,2737141..2737283,2738723..2738868,2739628..2739739,2739874..2740019,2746717..2747460,2755503..2755605,2756257..2756400,2756539..2756666,2757258..2757345,2764567..2764676,2766123..2766314,2766533..2766770,2769173..2769267,2770788..2771021,2772080..2772227,2773095..2773242,2774590..2774746,2794926..2795079,2809418..2809696))
location: region:2711347-2809696:-1
so has part: feature:2809418-2809696:-1:exon
so has part: feature:2794926-2795079:-1:exon
so has part: feature:2774590-2774746:-1:exon
so has part: feature:2773095-2773242:-1:exon
so has part: feature:2772080-2772227:-1:exon
so has part: feature:2770788-2771021:-1:exon
so has part: feature:2769173-2769267:-1:exon
so has part: feature:2766533-2766770:-1:exon
so has part: feature:2766123-2766314:-1:exon
so has part: feature:2764567-2764676:-1:exon
so has part: feature:2757258-2757345:-1:exon
so has part: feature:2756539-2756666:-1:exon
so has part: feature:2756257-2756400:-1:exon
so has part: feature:2755503-2755605:-1:exon
so has part: feature:2746717-2747460:-1:exon
so has part: feature:2739874-2740019:-1:exon
so has part: feature:2739628-2739739:-1:exon
so has part: feature:2738723-2738868:-1:exon
so has part: feature:2737141-2737283:-1:exon
so has part: feature:2736168-2736381:-1:exon
so has part: feature:2734768-2734943:-1:exon
so has part: feature:2733777-2733939:-1:exon
so has part: feature:2732580-2732675:-1:exon
so has part: feature:2732168-2732284:-1:exon
so has part: feature:2731008-2731182:-1:exon
so has part: feature:2730234-2730687:-1:exon
so has part: feature:2729722-2729799:-1:exon
so has part: feature:2728819-2728965:-1:exon
so has part: feature:2727175-2727285:-1:exon
so has part: feature:2725490-2725639:-1:exon
so has part: feature:2723570-2725185:-1:exon
so has part: feature:2718546-2718740:-1:exon
so has part: feature:2717217-2717471:-1:exon
so has part: feature:2716077-2716252:-1:exon
so has part: feature:2715007-2715171:-1:exon
so has part: feature:2714523-2714569:-1:exon
so has part: feature:2711347-2711500:-1:exon

XP_021387557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2809418-2809696:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2794926-2795079:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2774590-2774746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2773095-2773242:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2772080-2772227:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2770788-2771021:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2769173-2769267:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2766533-2766770:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2766123-2766314:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2764567-2764676:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2757258-2757345:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2756539-2756666:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2756257-2756400:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2755503-2755605:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2746717-2747460:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2739874-2740019:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2739628-2739739:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2738723-2738868:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2737141-2737283:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2736168-2736381:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2734768-2734943:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2733777-2733939:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2732580-2732675:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2732168-2732284:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2731008-2731182:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2730234-2730687:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2729722-2729799:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2728819-2728965:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2727175-2727285:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2725490-2725639:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2723570-2725185:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2718546-2718740:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2717217-2717471:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2716077-2716252:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2715007-2715171:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2714523-2714569:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2711347-2711500:-1:exon

LOC110471323
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110471323
product: ankyrin repeat and KH domain-containing protein 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 ESTs, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021531886.1
SIO_010081: LOC110471323
subclass of: SO_0000673
so part of: LOC110471323
location: complement(join(2714071..2714569,2715007..2715171,2716077..2716252,2717217..2717471,2718561..2718740,2723570..2725185,2725490..2725639,2727175..2727285,2728819..2728965,2729722..2729799,2730234..2730687,2731008..2731182,2732168..2732284,2732580..2732675,2733777..2733939,2734768..2734943,2736168..2736381,2737141..2737283,2738723..2738868,2739628..2739739,2739874..2740019,2746717..2747460,2755503..2755605,2756257..2756400,2756539..2756666,2757258..2757345,2764567..2764676,2766123..2766314,2766533..2766770,2769173..2769267,2770788..2771021,2772080..2772227,2773095..2773242,2774590..2774746,2794926..2795079,2809418..2809696))
location: region:2714071-2809696:-1
so has part: feature:2809418-2809696:-1:exon
so has part: feature:2794926-2795079:-1:exon
so has part: feature:2774590-2774746:-1:exon
so has part: feature:2773095-2773242:-1:exon
so has part: feature:2772080-2772227:-1:exon
so has part: feature:2770788-2771021:-1:exon
so has part: feature:2769173-2769267:-1:exon
so has part: feature:2766533-2766770:-1:exon
so has part: feature:2766123-2766314:-1:exon
so has part: feature:2764567-2764676:-1:exon
so has part: feature:2757258-2757345:-1:exon
so has part: feature:2756539-2756666:-1:exon
so has part: feature:2756257-2756400:-1:exon
so has part: feature:2755503-2755605:-1:exon
so has part: feature:2746717-2747460:-1:exon
so has part: feature:2739874-2740019:-1:exon
so has part: feature:2739628-2739739:-1:exon
so has part: feature:2738723-2738868:-1:exon
so has part: feature:2737141-2737283:-1:exon
so has part: feature:2736168-2736381:-1:exon
so has part: feature:2734768-2734943:-1:exon
so has part: feature:2733777-2733939:-1:exon
so has part: feature:2732580-2732675:-1:exon
so has part: feature:2732168-2732284:-1:exon
so has part: feature:2731008-2731182:-1:exon
so has part: feature:2730234-2730687:-1:exon
so has part: feature:2729722-2729799:-1:exon
so has part: feature:2728819-2728965:-1:exon
so has part: feature:2727175-2727285:-1:exon
so has part: feature:2725490-2725639:-1:exon
so has part: feature:2723570-2725185:-1:exon
so has part: feature:2718561-2718740:-1:exon
so has part: feature:2717217-2717471:-1:exon
so has part: feature:2716077-2716252:-1:exon
so has part: feature:2715007-2715171:-1:exon
so has part: feature:2714071-2714569:-1:exon

position:2714071:-1
position: 2714071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2809418-2809696:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2794926-2795079:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2774590-2774746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2773095-2773242:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2772080-2772227:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2770788-2771021:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2769173-2769267:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2766533-2766770:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2766123-2766314:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2764567-2764676:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2757258-2757345:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2756539-2756666:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2756257-2756400:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2755503-2755605:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2746717-2747460:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2739874-2740019:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2739628-2739739:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2738723-2738868:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2737141-2737283:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2736168-2736381:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2734768-2734943:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2733777-2733939:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2732580-2732675:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2732168-2732284:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2731008-2731182:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2730234-2730687:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2729722-2729799:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2728819-2728965:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2727175-2727285:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2725490-2725639:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2723570-2725185:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2718561-2718740:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2717217-2717471:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2716077-2716252:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2715007-2715171:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2714071-2714569:-1:exon

LOC110471323
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110471323
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and KH domain-containing protein 1 isoform X8
translation: MLTDGTAAAAADEEIDSVAPRAPPAAAEPPAAAGPSPLGLRAVRLFGEAGPGGPGGPGAPAAAEAALDFKLAAAVLRSGGGGGSGSDEDEVSEVESFILDQEDLDNPVLKTTSELFLSSAAEGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSCALDEAAAALTRMRAENNHNNGQVDNRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAAASGGYVDIVKLLLVHCADVNAQSSTGNTALTYACAGGFVDVVKVLLKAGANIEDHNENGHTPLMEAASAGHVEVARVLLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLDSGAQVNMPADSFESPLTLAACGGHVELAALLIERGANLEEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFLIKAGADIELGCSTPLMEAAQEGHLELVKYLLAAGANVHATTATGDTALTYACENGHTDVADVLLQAGADLEHESEGGRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLACAGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTNVVSYLLDYPNNVLSVPAADLSQLTPPSQDQSQVPRVPVHTLAMVVPPQEPDRTPQENSPPLLGVVKGASKQKSSSLQVADKDLLPPFHPYQPLECIVEETEGKLNELGQRISAIEKAQLKSLELIQGEPLNKDKIEELKKNREEQVQKKKKILKELQKVERQLQMKTQQQFTKEYLETKGQTDTPPALQQQCSLTGVFPEVEANKGLPEDNFSGLPQVDTILSKDDEQHQSPPPAEQIEFVPIQPLPAPQCNFSGNLGYNGTESLELQKALGNQQNVGQQQQIAGQGLLVQEPDGLMVATPAQTLTDTLDDLIAAVNSRVPSGSTSSSHTTESPTPEPCPQAASNVPPQSVLPMYPSVDIDAHTESNHDTALTLACAGGHEELVSVLIARGANIEHRDKKGFTPLILAATAGHVGVVEILLDKGGDIEAQSERTKDTPLSLACSGGRQEVVDLLLARGANKEHRNVSDYTPLSLAASGGYVNIIKILLNAGAEINSRTGSKLGISPLMLAAMNGHVPAVKLLLDMGSDINAQIETNRNTALTLACFQGRAEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYAEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHYKFCELLINRGAHIDVRNKKGNTPLWLAANGGHYDVVQLLVQAGADVDAADNRKITPLMSAFRKGHVKVVQFLVKEVNQFPSDIECMRYIATITDKDLLKKCHQCVETIVKAKDQQAAEANKNATILLKELDLEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENKPKETLELQEDDDEEENDDEVEQEVPIEPPSATTTTTIGISATSTTFTNAFGKKRANVVTTPSTNRKNKKNKTKETPQNMQIILPDQHISLAQQKADKNKINGEPRGGGASGNSDSDNLDSTDCNSESSSGGKSQELNFTMDTNSSERRYASLLIPSQEEKNSTSASKTPTRREEVDDSEHFTCQVDGQFDITLSSQRLDGEGHSNSLSTTYKSVSLPLTSPNVKLNLTSPKRGQKREEGWKEVVRRQVGRVLKDPPPSNTLQPTPIEQFQLQRGGRCCSGAKRSKKLSVPASVVSRIMGRGGCNITAIQDVTGAHIDVDKQKDKNGERMITIRGGTESTRYAVQLINALIQDPAKELEDLIPKTHIRTPASSTKSIHANFSSGVSTATASNKNSFPLGAPPLVTSQSSTLSTFQPPNKLNKNVPANVRSSFPVSLPLAYSHPHFALLAAQTMQQIRHPRLPMAQFGGTFSPSPNTWGPFPVRPVNPGSTNSSPKHNSSSRVGSQNGSVLQTESPGLPTSSCPVTASSVAASTQPLC…
SIO_010081: LOC110471323
subclass of: SO_0000673
so part of: LOC110471323
location: complement(join(2714510..2714569,2715007..2715171,2716077..2716252,2717217..2717471,2718561..2718740,2723570..2725185,2725490..2725639,2727175..2727285,2728819..2728965,2729722..2729799,2730234..2730687,2731008..2731182,2732168..2732284,2732580..2732675,2733777..2733939,2734768..2734943,2736168..2736381,2737141..2737283,2738723..2738868,2739628..2739739,2739874..2740019,2746717..2747460,2755503..2755605,2756257..2756400,2756539..2756666,2757258..2757345,2764567..2764676,2766123..2766314,2766533..2766770,2769173..2769267,2770788..2771021,2772080..2772227,2773095..2773242,2774590..2774746,2794926..2795079,2809418..2809696))
location: region:2714510-2809696:-1
so has part: feature:2809418-2809696:-1:exon
so has part: feature:2794926-2795079:-1:exon
so has part: feature:2774590-2774746:-1:exon
so has part: feature:2773095-2773242:-1:exon
so has part: feature:2772080-2772227:-1:exon
so has part: feature:2770788-2771021:-1:exon
so has part: feature:2769173-2769267:-1:exon
so has part: feature:2766533-2766770:-1:exon
so has part: feature:2766123-2766314:-1:exon
so has part: feature:2764567-2764676:-1:exon
so has part: feature:2757258-2757345:-1:exon
so has part: feature:2756539-2756666:-1:exon
so has part: feature:2756257-2756400:-1:exon
so has part: feature:2755503-2755605:-1:exon
so has part: feature:2746717-2747460:-1:exon
so has part: feature:2739874-2740019:-1:exon
so has part: feature:2739628-2739739:-1:exon
so has part: feature:2738723-2738868:-1:exon
so has part: feature:2737141-2737283:-1:exon
so has part: feature:2736168-2736381:-1:exon
so has part: feature:2734768-2734943:-1:exon
so has part: feature:2733777-2733939:-1:exon
so has part: feature:2732580-2732675:-1:exon
so has part: feature:2732168-2732284:-1:exon
so has part: feature:2731008-2731182:-1:exon
so has part: feature:2730234-2730687:-1:exon
so has part: feature:2729722-2729799:-1:exon
so has part: feature:2728819-2728965:-1:exon
so has part: feature:2727175-2727285:-1:exon
so has part: feature:2725490-2725639:-1:exon
so has part: feature:2723570-2725185:-1:exon
so has part: feature:2718561-2718740:-1:exon
so has part: feature:2717217-2717471:-1:exon
so has part: feature:2716077-2716252:-1:exon
so has part: feature:2715007-2715171:-1:exon
so has part: feature:2714510-2714569:-1:exon

XP_021387561.1
type: Protein
SIO_000068: ncbiprotein

position:2714510:-1
position: 2714510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2809418-2809696:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2794926-2795079:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2774590-2774746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2773095-2773242:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2772080-2772227:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2770788-2771021:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2769173-2769267:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2766533-2766770:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2766123-2766314:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2764567-2764676:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2757258-2757345:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2756539-2756666:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2756257-2756400:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2755503-2755605:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2746717-2747460:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2739874-2740019:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2739628-2739739:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2738723-2738868:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2737141-2737283:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2736168-2736381:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2734768-2734943:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2733777-2733939:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2732580-2732675:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2732168-2732284:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2731008-2731182:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2730234-2730687:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2729722-2729799:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2728819-2728965:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2727175-2727285:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2725490-2725639:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2723570-2725185:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2718561-2718740:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2717217-2717471:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2716077-2716252:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2715007-2715171:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2714510-2714569:-1:exon

SLC4A9
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SLC4A9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2810437..2822123)
location: region:2810437-2822123:-1
so has part: feature:2810437-2822123:-1:exon
subclass of: SO_0000010

110471344
type: Gene
SIO_000068: ncbigene

position:2810437:-1
position: 2810437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2822123:-1
position: 2822123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2810437-2822123:-1:exon

SLC4A9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SLC4A9
product: solute carrier family 4 member 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 86 Proteins, and 11% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031506065.1
SIO_010081: SLC4A9
subclass of: SO_0000673
so part of: SLC4A9
location: complement(join(2810437..2810739,2811074..2811247,2812086..2812154,2813024..2813096,2813240..2813418,2813572..2813733,2814389..2814502,2814642..2814824,2815592..2815931,2816046..2816179,2816416..2816590,2816759..2816892,2817404..2817574,2817856..2817940,2819532..2819689,2819788..2819849,2819963..2820112,2820325..2820485,2821987..2822123))
location: region:2810437-2822123:-1
so has part: feature:2821987-2822123:-1:exon
so has part: feature:2820325-2820485:-1:exon
so has part: feature:2819963-2820112:-1:exon
so has part: feature:2819788-2819849:-1:exon
so has part: feature:2819532-2819689:-1:exon
so has part: feature:2817856-2817940:-1:exon
so has part: feature:2817404-2817574:-1:exon
so has part: feature:2816759-2816892:-1:exon
so has part: feature:2816416-2816590:-1:exon
so has part: feature:2816046-2816179:-1:exon
so has part: feature:2815592-2815931:-1:exon
so has part: feature:2814642-2814824:-1:exon
so has part: feature:2814389-2814502:-1:exon
so has part: feature:2813572-2813733:-1:exon
so has part: feature:2813240-2813418:-1:exon
so has part: feature:2813024-2813096:-1:exon
so has part: feature:2812086-2812154:-1:exon
so has part: feature:2811074-2811247:-1:exon
so has part: feature:2810437-2810739:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2821987-2822123:-1:exon

position:2821987:-1
position: 2821987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2820325-2820485:-1:exon

position:2820325:-1
position: 2820325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2820485:-1
position: 2820485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2819963-2820112:-1:exon

position:2819963:-1
position: 2819963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2820112:-1
position: 2820112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2819788-2819849:-1:exon

position:2819788:-1
position: 2819788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2819849:-1
position: 2819849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2819532-2819689:-1:exon

position:2819532:-1
position: 2819532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2819689:-1
position: 2819689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2817856-2817940:-1:exon

position:2817856:-1
position: 2817856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2817940:-1
position: 2817940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2817404-2817574:-1:exon

position:2817404:-1
position: 2817404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2817574:-1
position: 2817574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2816759-2816892:-1:exon

position:2816759:-1
position: 2816759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2816892:-1
position: 2816892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2816416-2816590:-1:exon

position:2816416:-1
position: 2816416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2816590:-1
position: 2816590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2816046-2816179:-1:exon

position:2816046:-1
position: 2816046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2816179:-1
position: 2816179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2815592-2815931:-1:exon

position:2815592:-1
position: 2815592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2815931:-1
position: 2815931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2814642-2814824:-1:exon

position:2814642:-1
position: 2814642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2814824:-1
position: 2814824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2814389-2814502:-1:exon

position:2814389:-1
position: 2814389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2814502:-1
position: 2814502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2813572-2813733:-1:exon

position:2813572:-1
position: 2813572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2813733:-1
position: 2813733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2813240-2813418:-1:exon

position:2813240:-1
position: 2813240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2813418:-1
position: 2813418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2813024-2813096:-1:exon

position:2813024:-1
position: 2813024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2813096:-1
position: 2813096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2812086-2812154:-1:exon

position:2812086:-1
position: 2812086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2812154:-1
position: 2812154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2811074-2811247:-1:exon

position:2811074:-1
position: 2811074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2811247:-1
position: 2811247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2810437-2810739:-1:exon

position:2810739:-1
position: 2810739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC4A9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SLC4A9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anion exchange protein 4
translation: MATAARRAGATLQWEERGDVTCPLLFIQLNQLLSTPAGLEWREMARWIKFEEKVEDGGERWSTPHVPALPLHSLFQLRTCLQKGTMLLDLDATSFKEIIDKALSEQPEEAELQPALREHLAALLLLQPQHQPTKSLLQLLTELGLSPCRGKAKDRSEPRTQVSKTPLKEQLRNRFKKKVPPGAEAAHVAVGEVEFLEKPFTAFIRLRHGVSLGSLAEVSLPSRFLFILLGPPRVKAYHEVGRAMATLLTDELFQRVARQAEHREDLVAGIEAFLDELIVLPPGKWDPSARIPPPSHLPCPRRRWAGGRGLLCHRATVDPLDQQPHGNGDMTAAGDRASPGHPCSGDELERTGRLFGGLLRDIQRKAPWYGSDFSDALHPQCLSAVLYIYLATVTNAITFGGMLGDATANMQGVLESFLGTAFAGFFFCLFSGQPLTILSSTGPVLVFERLLFSFSQDHSLDYLEFRLWIGLWVGFFGVVLVATEASHLVRYFTRFTEEGFCALISLIFIYDSLKKMLSLADAFPINWQYRLDNVTSYSCTCNLSSPGEPKQPWVGREQEAVAPGCHWKPPPATPAGLSRTQCLDRGGHLLGTSCQYVPDVTLMSFLLFGGTFLLCIALKRFRSSRYFPVGVRKLVSDFAVILAILASCVVDAVLGLETPKLLVPSELKPTNPARGWIIFPFGANPWWVCLLSAVPAVLVTILIFMDQQITAVILNRSEYKLQKGAGFHLDLLCVSLLMVVTSVTGLPWYVSATVISLAHMESLRKESATSAPGEHPEFLGIREQRLTGLAVFILMGVSVFMAPVLKHIPMPVLYGVFLHMGVTALNSIQLMDRVRLLLMPAKHQPDLAYLRHVPLRRVHLFTIIQLLCLALLWLLKSTVAAIIFPVMLLALVAIRKGLERIFSRHDLGWLDGPLPGPGAAGTQRRERPERGSRAEEVGAVPGASLSRSRPGAEPLARGGRGAGPVTSVPPQCEPMQRPGPQINLSVN
SIO_010081: SLC4A9
subclass of: SO_0000673
so part of: SLC4A9
location: complement(join(2810437..2810739,2811074..2811247,2812086..2812154,2813024..2813096,2813240..2813418,2813572..2813733,2814389..2814502,2814642..2814824,2815592..2815931,2816046..2816179,2816416..2816590,2816759..2816892,2817404..2817574,2817856..2817940,2819532..2819689,2819788..2819849,2819963..2820112,2820325..2820485,2821987..2822123))
location: region:2810437-2822123:-1
so has part: feature:2821987-2822123:-1:exon
so has part: feature:2820325-2820485:-1:exon
so has part: feature:2819963-2820112:-1:exon
so has part: feature:2819788-2819849:-1:exon
so has part: feature:2819532-2819689:-1:exon
so has part: feature:2817856-2817940:-1:exon
so has part: feature:2817404-2817574:-1:exon
so has part: feature:2816759-2816892:-1:exon
so has part: feature:2816416-2816590:-1:exon
so has part: feature:2816046-2816179:-1:exon
so has part: feature:2815592-2815931:-1:exon
so has part: feature:2814642-2814824:-1:exon
so has part: feature:2814389-2814502:-1:exon
so has part: feature:2813572-2813733:-1:exon
so has part: feature:2813240-2813418:-1:exon
so has part: feature:2813024-2813096:-1:exon
so has part: feature:2812086-2812154:-1:exon
so has part: feature:2811074-2811247:-1:exon
so has part: feature:2810437-2810739:-1:exon

XP_031361925.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2821987-2822123:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2820325-2820485:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2819963-2820112:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2819788-2819849:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2819532-2819689:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2817856-2817940:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2817404-2817574:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2816759-2816892:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2816416-2816590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2816046-2816179:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2815592-2815931:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2814642-2814824:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2814389-2814502:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2813572-2813733:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2813240-2813418:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2813024-2813096:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2812086-2812154:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2811074-2811247:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2810437-2810739:-1:exon

HBEGF
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: HBEGF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2824802..2829784
location: region:2824802-2829784:1
so has part: feature:2824802-2829784:1:exon
subclass of: SO_0000010

110471343
type: Gene
SIO_000068: ncbigene

position:2824802:1
position: 2824802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2829784:1
position: 2829784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2824802-2829784:1:exon

HBEGF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: HBEGF
product: heparin binding EGF like growth factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031506019.1
SIO_010081: HBEGF
subclass of: SO_0000673
so part of: HBEGF
location: join(2824802..2824959,2825200..2825376,2827345..2827522,2829423..2829578,2829692..2829784)
location: region:2824802-2829784:1
so has part: feature:2824802-2824959:1:exon
so has part: feature:2825200-2825376:1:exon
so has part: feature:2827345-2827522:1:exon
so has part: feature:2829423-2829578:1:exon
so has part: feature:2829692-2829784:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2824802-2824959:1:exon

position:2824959:1
position: 2824959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2825200-2825376:1:exon

position:2825200:1
position: 2825200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2825376:1
position: 2825376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2827345-2827522:1:exon

position:2827345:1
position: 2827345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2827522:1
position: 2827522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2829423-2829578:1:exon

position:2829423:1
position: 2829423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2829578:1
position: 2829578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2829692-2829784:1:exon

position:2829692:1
position: 2829692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HBEGF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: HBEGF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proheparin-binding EGF-like growth factor
translation: MDGRAVLIQALLAAVCSAAAGGLRRDELHNEVLHKGGGGGGVPVPATAPLLGGSPEKDGGGAASGDDFSELPRVAFLSKPQGLVTPKKKGNGNKRRKGKGLGKKRDPCLRKYKDFCIHGECKYIRELGAPSCICQPGYHGERCHGLLLPVEHPPSAYDHTTALAVVAVVLSSLCLVIIAALLMLRCHKRGGYDVENEEKIKLGITVNH
SIO_010081: HBEGF
subclass of: SO_0000673
so part of: HBEGF
location: join(2824917..2824959,2825200..2825376,2827345..2827522,2829423..2829578,2829692..2829764)
location: region:2824917-2829764:1
so has part: feature:2824917-2824959:1:exon
so has part: feature:2825200-2825376:1:exon
so has part: feature:2827345-2827522:1:exon
so has part: feature:2829423-2829578:1:exon
so has part: feature:2829692-2829764:1:exon

XP_031361879.1
type: Protein
SIO_000068: ncbiprotein

position:2824917:1
position: 2824917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2829764:1
position: 2829764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2824917-2824959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2825200-2825376:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2827345-2827522:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2829423-2829578:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2829692-2829764:1:exon

PFDN1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: PFDN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2833460..2864376
location: region:2833460-2864376:1
so has part: feature:2833460-2864376:1:exon
subclass of: SO_0000010

110471322
type: Gene
SIO_000068: ncbigene

position:2833460:1
position: 2833460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2864376:1
position: 2864376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2833460-2864376:1:exon

PFDN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PFDN1
product: prefoldin subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_021531876.1
SIO_010081: PFDN1
subclass of: SO_0000673
so part of: PFDN1
location: join(2833460..2833534,2833718..2833884,2848528..2848612,2864222..2864376)
location: region:2833460-2864376:1
so has part: feature:2833460-2833534:1:exon
so has part: feature:2833718-2833884:1:exon
so has part: feature:2848528-2848612:1:exon
so has part: feature:2864222-2864376:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2833460-2833534:1:exon

position:2833534:1
position: 2833534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2833718-2833884:1:exon

position:2833718:1
position: 2833718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2833884:1
position: 2833884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2848528-2848612:1:exon

position:2848528:1
position: 2848528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2848612:1
position: 2848612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2864222-2864376:1:exon

position:2864222:1
position: 2864222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PFDN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PFDN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prefoldin subunit 1
translation: MAAPVDLELKKAFTELQAKVMDTQQKVKLADLQIEQLTKTKKHAHLTDTEVMMLVDETRMYEGVGRMFILQPKGVIHNQLLEKQRIAEEKIKELEQKKSYLERSVKEAEDNIREMLMARRAQ
SIO_010081: PFDN1
subclass of: SO_0000673
so part of: PFDN1
location: join(2833502..2833534,2833718..2833884,2848528..2848612,2864222..2864305)
location: region:2833502-2864305:1
so has part: feature:2833502-2833534:1:exon
so has part: feature:2833718-2833884:1:exon
so has part: feature:2848528-2848612:1:exon
so has part: feature:2864222-2864305:1:exon

XP_021387551.1
type: Protein
SIO_000068: ncbiprotein

position:2833502:1
position: 2833502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2864305:1
position: 2864305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2833502-2833534:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2833718-2833884:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2848528-2848612:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2864222-2864305:1:exon

CYSTM1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: CYSTM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2867539..>2890919)
location: region:2867539-2890919:-1
so has part: feature:2867539-2890919:-1:exon
subclass of: SO_0000010

110471321
type: Gene
SIO_000068: ncbigene

position:2867539:-1
position: 2867539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2890919:-1
position: 2890919
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2867539-2890919:-1:exon

CYSTM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: CYSTM1
product: cysteine rich transmembrane module containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 2 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_031506066.1
SIO_010081: CYSTM1
subclass of: SO_0000673
so part of: CYSTM1
location: complement(join(2867539..2867996,2879499..2879740,2890837..>2890919))
location: region:2867539-2890919:-1
so has part: feature:2890837-2890919:-1:exon
so has part: feature:2879499-2879740:-1:exon
so has part: feature:2867539-2867996:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2890837-2890919:-1:exon

position:2890837:-1
position: 2890837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2879499-2879740:-1:exon

position:2879499:-1
position: 2879499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2879740:-1
position: 2879740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2867539-2867996:-1:exon

position:2867996:-1
position: 2867996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CYSTM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: CYSTM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine-rich and transmembrane domain-containing protein 1
translation: VGGVACSVTSPCRGVRSRCGRRRETRRAADSASHMSYDNPPPYPGPGPTAPYPPYAQQPGGPPGPYPGYPPGPYQPGQPGYQGYPQYGWQNAPPPPPGPVYADGPKNTVYVVEERRRDDTGESACLTACWTALCCCCLWDMLT
SIO_010081: CYSTM1
subclass of: SO_0000673
so part of: CYSTM1
location: complement(join(2867890..2867996,2879499..2879740,2890837..>2890919))
location: region:2867890-2890919:-1
so has part: feature:2890837-2890919:-1:exon
so has part: feature:2879499-2879740:-1:exon
so has part: feature:2867890-2867996:-1:exon

XP_031361926.1
type: Protein
SIO_000068: ncbiprotein

position:2867890:-1
position: 2867890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2890837-2890919:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2879499-2879740:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2867890-2867996:-1:exon

LOC116183118
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116183118
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2914926..2928083)
location: region:2914926-2928083:-1
so has part: feature:2914926-2928083:-1:exon
subclass of: SO_0000011

116183118
type: Gene
SIO_000068: ncbigene

position:2914926:-1
position: 2914926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2928083:-1
position: 2928083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2914926-2928083:-1:exon

LOC116183118
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC116183118
product: uncharacterized LOC116183118
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004148878.1
SIO_010081: LOC116183118
subclass of: SO_0000673
so part of: LOC116183118
location: complement(join(2914926..2915488,2916626..2928083))
location: region:2914926-2928083:-1
so has part: feature:2916626-2928083:-1:exon
so has part: feature:2914926-2915488:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2916626-2928083:-1:exon

position:2916626:-1
position: 2916626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2914926-2915488:-1:exon

position:2915488:-1
position: 2915488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PURA
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: PURA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2934255..2935205)
location: region:2934255-2935205:-1
so has part: feature:2934255-2935205:-1:exon
subclass of: SO_0000010

110471320
type: Gene
SIO_000068: ncbigene

position:2934255:-1
position: 2934255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2935205:-1
position: 2935205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2934255-2935205:-1:exon

PURA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PURA
product: purine rich element binding protein A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 12 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031506024.1
SIO_010081: PURA
subclass of: SO_0000673
so part of: PURA
location: complement(2934255..2935205)
location: region:2934255-2935205:-1
so has part: feature:2934255-2935205:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2934255-2935205:-1:exon

PURA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PURA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcriptional activator protein Pur-alpha
translation: MADRDSGSEQGGGGGGAAGAGGPGAGGGGPGGGGGGGGGPGGGLQHETQELASKRVDIQNKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQPPELAQAADEPRRALKSEFLVRENRKYYMDLKENQRGRFLRVRQTVNRGPGLGSTQGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVFMRVSEVKPTYRNSITVPYKVWAKFGHTFCKYSDEMKKIQEKQRDKRAAAAAAPAVGAEPPPEAEAAAAGPPGALLQAEEPEED
SIO_010081: PURA
subclass of: SO_0000673
so part of: PURA
location: complement(2934255..2935205)
location: region:2934255-2935205:-1
so has part: feature:2934255-2935205:-1:exon

XP_031361884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2934255-2935205:-1:exon

LOC116184128
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116184128
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2952224..2952709)
location: region:2952224-2952709:-1
so has part: feature:2952224-2952709:-1:exon
subclass of: SO_0000011

116184128
type: Gene
SIO_000068: ncbigene

position:2952224:-1
position: 2952224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2952709:-1
position: 2952709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2952224-2952709:-1:exon

LOC116184128
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC116184128
product: uncharacterized LOC116184128
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_004148868.1
SIO_010081: LOC116184128
subclass of: SO_0000673
so part of: LOC116184128
location: complement(join(2952224..2952482,2952637..2952709))
location: region:2952224-2952709:-1
so has part: feature:2952637-2952709:-1:exon
so has part: feature:2952224-2952482:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2952637-2952709:-1:exon

position:2952637:-1
position: 2952637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2952224-2952482:-1:exon

position:2952482:-1
position: 2952482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NRG2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: NRG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2952946..3107832
location: region:2952946-3107832:1
so has part: feature:2952946-3107832:1:exon
subclass of: SO_0000010

110471318
type: Gene
SIO_000068: ncbigene

position:2952946:1
position: 2952946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3107832:1
position: 3107832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2952946-3107832:1:exon

NRG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: NRG2
product: neuregulin 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031506032.1
SIO_010081: NRG2
subclass of: SO_0000673
so part of: NRG2
location: join(2952946..2953394,3052159..3052330,3064311..3064429,3067519..3067584,3078012..3078132,3086975..3087033,3095108..3095131,3099554..3099656,3100539..3100662,3101925..3102052,3104499..3104723,3106135..3107832)
location: region:2952946-3107832:1
so has part: feature:2952946-2953394:1:exon
so has part: feature:3052159-3052330:1:exon
so has part: feature:3064311-3064429:1:exon
so has part: feature:3067519-3067584:1:exon
so has part: feature:3078012-3078132:1:exon
so has part: feature:3086975-3087033:1:exon
so has part: feature:3095108-3095131:1:exon
so has part: feature:3099554-3099656:1:exon
so has part: feature:3100539-3100662:1:exon
so has part: feature:3101925-3102052:1:exon
so has part: feature:3104499-3104723:1:exon
so has part: feature:3106135-3107832:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2952946-2953394:1:exon

position:2953394:1
position: 2953394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3052159-3052330:1:exon

position:3052159:1
position: 3052159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3052330:1
position: 3052330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3064311-3064429:1:exon

position:3064311:1
position: 3064311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3064429:1
position: 3064429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3067519-3067584:1:exon

position:3067519:1
position: 3067519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3067584:1
position: 3067584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3078012-3078132:1:exon

position:3078012:1
position: 3078012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3078132:1
position: 3078132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3086975-3087033:1:exon

position:3086975:1
position: 3086975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3087033:1
position: 3087033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3095108-3095131:1:exon

position:3095108:1
position: 3095108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3095131:1
position: 3095131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3099554-3099656:1:exon

position:3099554:1
position: 3099554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3099656:1
position: 3099656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3100539-3100662:1:exon

position:3100539:1
position: 3100539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3100662:1
position: 3100662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3101925-3102052:1:exon

position:3101925:1
position: 3101925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3102052:1
position: 3102052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3104499-3104723:1:exon

position:3104499:1
position: 3104499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3104723:1
position: 3104723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3106135-3107832:1:exon

position:3106135:1
position: 3106135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NRG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: NRG2
product: neuregulin 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021531870.2
SIO_010081: NRG2
subclass of: SO_0000673
so part of: NRG2
location: join(2952946..2953394,3052159..3052330,3064311..3064429,3078012..3078132,3086975..3087033,3095108..3095131,3099554..3099656,3100539..3100662,3101925..3102052,3104499..3104723,3106135..3107831)
location: region:2952946-3107831:1
so has part: feature:2952946-2953394:1:exon
so has part: feature:3052159-3052330:1:exon
so has part: feature:3064311-3064429:1:exon
so has part: feature:3078012-3078132:1:exon
so has part: feature:3086975-3087033:1:exon
so has part: feature:3095108-3095131:1:exon
so has part: feature:3099554-3099656:1:exon
so has part: feature:3100539-3100662:1:exon
so has part: feature:3101925-3102052:1:exon
so has part: feature:3104499-3104723:1:exon
so has part: feature:3106135-3107831:1:exon

position:3107831:1
position: 3107831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2952946-2953394:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3052159-3052330:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3064311-3064429:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3078012-3078132:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3086975-3087033:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3095108-3095131:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3099554-3099656:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3100539-3100662:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3101925-3102052:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3104499-3104723:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3106135-3107831:1:exon

NRG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: NRG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pro-neuregulin-2, membrane-bound isoform isoform X1
translation: MRRDPAPGFSMLLFGVSLACYSPSLKSVQDQAYTAAVVLEGKVQSVGPPAGGNDSRGAGPAGGVLVKVLDLWPLNSGGLQREQLISVGSKAPCFKVKRNHRYIFFLEPTEEPLVFRTAFAPLDTSGKNLKRDVARILCADCAVPPKLKKLKSPNVHVGEKISLKCEATAGNPQPSYKWFKDGKELKKSKDIRIKYGNGKKISRLQFNKVKLEDAGEYSCEAENVLGKDTAKGSLNVKSGTTKAPQVLPASETKIVVMEEELTTTLSSWSGHARKCNETAKSYCVNGGVCYYIEGINQLSCKCPIEFTGDRCQHFAMVSFSKHLGFELKEAEELYQKRVLTITGICVALLVVGIVCVVAYCKTKKQRKQMHNHLRQNMCPAHQNRSLANGPSHPRLDPEEIQMADYISKNVSATEHVIRRETETTFSGSHSCSPSHHCSTATPTSSQRHESHTWSLERTESLTSDSQSGIMLSSVGTSKCNSPACVEARARRGATFCIEDQRRPTTQYRDSVDSLRDSPHSERYVSALTTPARLSPVDFHYSMATQVPTFEITSPNSAHAVSLPPAAPISFRVEEQQPLLRRYQLPFQDTQRYDSYYQRKTYLNDSMGSLPSSPFRITEDDEYETTQEYVTALEQPKKTASSNRRWKKSKLNGHIPHRARAVRDSFSLSSASYSESDEELVAESTPFLSTQNNEAAHTESPPLHRPGDSRTHYSCRGHVAHGDGGRGSLAHVAPKADPNPL
SIO_010081: NRG2
subclass of: SO_0000673
so part of: NRG2
location: join(2952971..2953394,3052159..3052330,3064311..3064429,3067519..3067584,3078012..3078132,3086975..3087033,3095108..3095131,3099554..3099656,3100539..3100662,3101925..3102052,3104499..3104723,3106135..3106792)
location: region:2952971-3106792:1
so has part: feature:2952971-2953394:1:exon
so has part: feature:3052159-3052330:1:exon
so has part: feature:3064311-3064429:1:exon
so has part: feature:3067519-3067584:1:exon
so has part: feature:3078012-3078132:1:exon
so has part: feature:3086975-3087033:1:exon
so has part: feature:3095108-3095131:1:exon
so has part: feature:3099554-3099656:1:exon
so has part: feature:3100539-3100662:1:exon
so has part: feature:3101925-3102052:1:exon
so has part: feature:3104499-3104723:1:exon
so has part: feature:3106135-3106792:1:exon

XP_031361892.1
type: Protein
SIO_000068: ncbiprotein

position:2952971:1
position: 2952971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3106792:1
position: 3106792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2952971-2953394:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3052159-3052330:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3064311-3064429:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3067519-3067584:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3078012-3078132:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3086975-3087033:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3095108-3095131:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3099554-3099656:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3100539-3100662:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3101925-3102052:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3104499-3104723:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3106135-3106792:1:exon

NRG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: NRG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pro-neuregulin-2, membrane-bound isoform isoform X2
translation: MRRDPAPGFSMLLFGVSLACYSPSLKSVQDQAYTAAVVLEGKVQSVGPPAGGNDSRGAGPAGGVLVKVLDLWPLNSGGLQREQLISVGSKAPCFKVKRNHRYIFFLEPTEEPLVFRTAFAPLDTSGKNLKRDVARILCADCAVPPKLKKLKSPNVHVGEKISLKCEATAGNPQPSYKWFKDGKELKKSKDIRIKYGNGKKISRLQFNKVKLEDAGEYSCEAENVLGKDTAKGSLNVKSVTTTLSSWSGHARKCNETAKSYCVNGGVCYYIEGINQLSCKCPIEFTGDRCQHFAMVSFSKHLGFELKEAEELYQKRVLTITGICVALLVVGIVCVVAYCKTKKQRKQMHNHLRQNMCPAHQNRSLANGPSHPRLDPEEIQMADYISKNVSATEHVIRRETETTFSGSHSCSPSHHCSTATPTSSQRHESHTWSLERTESLTSDSQSGIMLSSVGTSKCNSPACVEARARRGATFCIEDQRRPTTQYRDSVDSLRDSPHSERYVSALTTPARLSPVDFHYSMATQVPTFEITSPNSAHAVSLPPAAPISFRVEEQQPLLRRYQLPFQDTQRYDSYYQRKTYLNDSMGSLPSSPFRITEDDEYETTQEYVTALEQPKKTASSNRRWKKSKLNGHIPHRARAVRDSFSLSSASYSESDEELVAESTPFLSTQNNEAAHTESPPLHRPGDSRTHYSCRGHVAHGDGGRGSLAHVAPKADPNPL
SIO_010081: NRG2
subclass of: SO_0000673
so part of: NRG2
location: join(2952971..2953394,3052159..3052330,3064311..3064429,3078012..3078132,3086975..3087033,3095108..3095131,3099554..3099656,3100539..3100662,3101925..3102052,3104499..3104723,3106135..3106792)
location: region:2952971-3106792:1
so has part: feature:2952971-2953394:1:exon
so has part: feature:3052159-3052330:1:exon
so has part: feature:3064311-3064429:1:exon
so has part: feature:3078012-3078132:1:exon
so has part: feature:3086975-3087033:1:exon
so has part: feature:3095108-3095131:1:exon
so has part: feature:3099554-3099656:1:exon
so has part: feature:3100539-3100662:1:exon
so has part: feature:3101925-3102052:1:exon
so has part: feature:3104499-3104723:1:exon
so has part: feature:3106135-3106792:1:exon

XP_021387545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2952971-2953394:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3052159-3052330:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3064311-3064429:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3078012-3078132:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3086975-3087033:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3095108-3095131:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3099554-3099656:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3100539-3100662:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3101925-3102052:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3104499-3104723:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3106135-3106792:1:exon

PSD2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: PSD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3112418..3167935)
location: region:3112418-3167935:-1
so has part: feature:3112418-3167935:-1:exon
subclass of: SO_0000010

110471317
type: Gene
SIO_000068: ncbigene

position:3112418:-1
position: 3112418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3167935:-1
position: 3167935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3112418-3167935:-1:exon

PSD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PSD2
product: pleckstrin and Sec7 domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 13 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021531867.2
SIO_010081: PSD2
subclass of: SO_0000673
so part of: PSD2
location: complement(join(3112418..3114138,3115677..3115820,3116854..3116998,3118005..3118162,3124815..3124885,3125929..3126119,3129624..3129667,3130761..3130850,3135675..3135733,3137122..3137234,3137713..3137793,3140867..3141061,3142133..3142621,3146005..3146568,3148592..3148694,3167560..3167935))
location: region:3112418-3167935:-1
so has part: feature:3167560-3167935:-1:exon
so has part: feature:3148592-3148694:-1:exon
so has part: feature:3146005-3146568:-1:exon
so has part: feature:3142133-3142621:-1:exon
so has part: feature:3140867-3141061:-1:exon
so has part: feature:3137713-3137793:-1:exon
so has part: feature:3137122-3137234:-1:exon
so has part: feature:3135675-3135733:-1:exon
so has part: feature:3130761-3130850:-1:exon
so has part: feature:3129624-3129667:-1:exon
so has part: feature:3125929-3126119:-1:exon
so has part: feature:3124815-3124885:-1:exon
so has part: feature:3118005-3118162:-1:exon
so has part: feature:3116854-3116998:-1:exon
so has part: feature:3115677-3115820:-1:exon
so has part: feature:3112418-3114138:-1:exon