Lonchura striata domestica isolate Mets1 chromosome 12, lonStrDom2, whole genome shotgun sequence.
type: Entry
definition: Lonchura striata domestica isolate Mets1 chromosome 12, lonStrDom2, whole genome shotgun sequence.
sequence version: NC_042578.1
sequence date: 2019-11-05
sequence: sequence
division: CON
label: NC_042578.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA391487
dblink: SAMN11521339
keyword: WGS
keyword: RefSeq
source: Lonchura striata domestica (Bengalese finch)
organism: Lonchura striata domestica
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM016774.1.\nAssembly name: lonStrDom2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the HHMI/UCSF on 2019/06/05. The\noriginal whole-genome shotgun project has the accession\nSWKX00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: HHMI/UCSF\nAssembly Date :: 30-NOV-2018\nAssembly Method :: AllPaths v. JAN-2015; HiRise v.\n NOV-2018\nAssembly Name :: lonStrDom2\nGenome Representation :: Full\nExpected Final Version :: Yes\nReference-guided Assembly :: GCA_002197715.1\nGenome Coverage :: 151.0x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Lonchura striata domestica\n Annotation Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 20959059
topology: linear
so has quality: SO_0000987
location: 1..20959059
location: region:1-20959059:1
RO_0002162: 299123

NC_042578
type: RefSeq
SIO_000068: refseq

PRJNA391487
type: BioProject
SIO_000068: bioproject

SAMN11521339
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20959059:1
position: 20959059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-20959059:1:source
so part of: sequence
organism: Lonchura striata domestica
mol type: genomic DNA
isolate: Mets1
sub species: domestica
chromosome: 12
sex: male
tissue type: blood
dev stage: adult

299123
type: Taxonomy
SIO_000068: taxonomy

MAJIN
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: MAJIN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 72541..86861
location: region:72541-86861:1
so has part: feature:72541-86861:1:exon
subclass of: SO_0000010

110475409
type: Gene
SIO_000068: ncbigene

position:72541:1
position: 72541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86861:1
position: 86861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72541-86861:1:exon

MAJIN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: MAJIN
product: membrane anchored junction protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031505925.1
SIO_010081: MAJIN
subclass of: SO_0000673
so part of: MAJIN
location: join(72541..72763,73208..73335,73626..73671,74970..75045,77454..77579,78872..78903,79689..79798,82558..82612,85387..85459,85565..85709,86502..86861)
location: region:72541-86861:1
so has part: feature:72541-72763:1:exon
so has part: feature:73208-73335:1:exon
so has part: feature:73626-73671:1:exon
so has part: feature:74970-75045:1:exon
so has part: feature:77454-77579:1:exon
so has part: feature:78872-78903:1:exon
so has part: feature:79689-79798:1:exon
so has part: feature:82558-82612:1:exon
so has part: feature:85387-85459:1:exon
so has part: feature:85565-85709:1:exon
so has part: feature:86502-86861:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:72541-72763:1:exon

position:72763:1
position: 72763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:73208-73335:1:exon

position:73208:1
position: 73208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73335:1
position: 73335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:73626-73671:1:exon

position:73626:1
position: 73626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73671:1
position: 73671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:74970-75045:1:exon

position:74970:1
position: 74970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75045:1
position: 75045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:77454-77579:1:exon

position:77454:1
position: 77454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77579:1
position: 77579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:78872-78903:1:exon

position:78872:1
position: 78872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78903:1
position: 78903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:79689-79798:1:exon

position:79689:1
position: 79689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79798:1
position: 79798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:82558-82612:1:exon

position:82558:1
position: 82558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82612:1
position: 82612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:85387-85459:1:exon

position:85387:1
position: 85387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85459:1
position: 85459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:85565-85709:1:exon

position:85565:1
position: 85565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85709:1
position: 85709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:86502-86861:1:exon

position:86502:1
position: 86502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAJIN
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 299123
gene: MAJIN
product: membrane anchored junction protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004148813.1
SIO_010081: MAJIN
so part of: MAJIN
location: join(72542..72763,73208..73335,74970..75246)
location: region:72542-75246:1
so has part: feature:72542-72763:1:exon
so has part: feature:73208-73335:1:exon
so has part: feature:74970-75246:1:exon

position:72542:1
position: 72542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75246:1
position: 75246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72542-72763:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:73208-73335:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:74970-75246:1:exon

MAJIN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: MAJIN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-anchored junction protein
translation: MSLKPFTYPLPETRFLHAGRHVYKFKIRYGNFNSSPKLSLTESAAKELEEVIRVILGNLDDLHPFSTHHFTIFPYLSKWERVSKMKFKHENVHLMPYPYICTLYLELNSFQRSLSCGKEVNKGSDELVRRRNEISESTAMKEAVKRRRVEVRDDTSCPESCMDRTGADCVYHMSKAEQGFEKNSSKANELEFSPASLTKDCDQLSFWGPVEFALEQKRAASKTKGVVELQQQMDQTGKKGNIKSEGRGLSQFWRSIIFSPLQHLFGGKN
SIO_010081: MAJIN
subclass of: SO_0000673
so part of: MAJIN
location: join(73235..73335,73626..73671,74970..75045,77454..77579,78872..78903,79689..79798,82558..82612,85387..85459,85565..85709,86502..86547)
location: region:73235-86547:1
so has part: feature:73235-73335:1:exon
so has part: feature:73626-73671:1:exon
so has part: feature:74970-75045:1:exon
so has part: feature:77454-77579:1:exon
so has part: feature:78872-78903:1:exon
so has part: feature:79689-79798:1:exon
so has part: feature:82558-82612:1:exon
so has part: feature:85387-85459:1:exon
so has part: feature:85565-85709:1:exon
so has part: feature:86502-86547:1:exon

XP_031361785.1
type: Protein
SIO_000068: ncbiprotein

position:73235:1
position: 73235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86547:1
position: 86547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73235-73335:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:73626-73671:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:74970-75045:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:77454-77579:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:78872-78903:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:79689-79798:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:82558-82612:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85387-85459:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:85565-85709:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:86502-86547:1:exon

LOC110475410
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110475410
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 90484..92389
location: region:90484-92389:1
so has part: feature:90484-92389:1:exon
subclass of: SO_0000010

110475410
type: Gene
SIO_000068: ncbigene

position:90484:1
position: 90484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92389:1
position: 92389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90484-92389:1:exon

LOC110475410
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110475410
product: T-cell surface glycoprotein CD1b-3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 34% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031505945.1
SIO_010081: LOC110475410
subclass of: SO_0000673
so part of: LOC110475410
location: join(90484..90562,90887..91144,91303..91584,91680..91964,92073..92169,92329..92389)
location: region:90484-92389:1
so has part: feature:90484-90562:1:exon
so has part: feature:90887-91144:1:exon
so has part: feature:91303-91584:1:exon
so has part: feature:91680-91964:1:exon
so has part: feature:92073-92169:1:exon
so has part: feature:92329-92389:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90484-90562:1:exon

position:90562:1
position: 90562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:90887-91144:1:exon

position:90887:1
position: 90887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91144:1
position: 91144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:91303-91584:1:exon

position:91303:1
position: 91303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91584:1
position: 91584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:91680-91964:1:exon

position:91680:1
position: 91680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91964:1
position: 91964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:92073-92169:1:exon

position:92073:1
position: 92073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92169:1
position: 92169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:92329-92389:1:exon

position:92329:1
position: 92329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110475410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110475410
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-cell surface glycoprotein CD1b-3
translation: MQSPCCCLLSLLLHLFLLSGTWANLEGTFTIRLLQTTTFQNTSFVDMEGLGLLEDIELGSLDKHTWSIHFCQPWVRPALPRADWDTIENLLKIYLQQFNHLINEGAVQRDIPYPFVVQCTAGCVLYPNRTSRAFGYVGYNGQDFLSFDTKNITWTLSQDTELSRYVQSFLQNYTALSELVEILFNDTCVDDMEVLLHYGRAALERQELPVARVFARTPSPDQLLLVCHVTGFYPRPISVAWLQDGQEVPPGPALNTSTILPNADLTYQLRSVLAVAPHDGHSYVCRVRHHSLGTRSLLIPWGNSEVVLITALMAGLLAAMAVAAMLVLWVWRQRKHQQMEESESENSILSKEA
SIO_010081: LOC110475410
subclass of: SO_0000673
so part of: LOC110475410
location: join(90484..90562,90887..91144,91303..91584,91680..91964,92073..92169,92329..92389)
location: region:90484-92389:1
so has part: feature:90484-90562:1:exon
so has part: feature:90887-91144:1:exon
so has part: feature:91303-91584:1:exon
so has part: feature:91680-91964:1:exon
so has part: feature:92073-92169:1:exon
so has part: feature:92329-92389:1:exon

XP_031361805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90484-90562:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90887-91144:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91303-91584:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91680-91964:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:92073-92169:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92329-92389:1:exon

LOC110475413
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110475413
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 95826..99123
location: region:95826-99123:1
so has part: feature:95826-99123:1:exon
subclass of: SO_0000010

110475413
type: Gene
SIO_000068: ncbigene

position:95826:1
position: 95826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99123:1
position: 99123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95826-99123:1:exon

LOC110475413
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110475413
product: antigen-presenting glycoprotein CD1d, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021539522.1
SIO_010081: LOC110475413
subclass of: SO_0000673
so part of: LOC110475413
location: join(95826..95919,97122..97379,97925..98209,98315..98599,98723..98819,98945..99123)
location: region:95826-99123:1
so has part: feature:95826-95919:1:exon
so has part: feature:97122-97379:1:exon
so has part: feature:97925-98209:1:exon
so has part: feature:98315-98599:1:exon
so has part: feature:98723-98819:1:exon
so has part: feature:98945-99123:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:95826-95919:1:exon

position:95919:1
position: 95919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:97122-97379:1:exon

position:97122:1
position: 97122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97379:1
position: 97379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:97925-98209:1:exon

position:97925:1
position: 97925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98209:1
position: 98209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:98315-98599:1:exon

position:98315:1
position: 98315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98599:1
position: 98599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:98723-98819:1:exon

position:98723:1
position: 98723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98819:1
position: 98819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:98945-99123:1:exon

position:98945:1
position: 98945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110475413
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110475413
product: antigen-presenting glycoprotein CD1d, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021539521.1
SIO_010081: LOC110475413
subclass of: SO_0000673
so part of: LOC110475413
location: join(95838..95919,97119..97379,97925..98209,98315..98599,98723..98819,98945..99123)
location: region:95838-99123:1
so has part: feature:95838-95919:1:exon
so has part: feature:97119-97379:1:exon
so has part: feature:97925-98209:1:exon
so has part: feature:98315-98599:1:exon
so has part: feature:98723-98819:1:exon
so has part: feature:98945-99123:1:exon

position:95838:1
position: 95838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95838-95919:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:97119-97379:1:exon

position:97119:1
position: 97119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:97925-98209:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:98315-98599:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:98723-98819:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:98945-99123:1:exon

LOC110475413
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110475413
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: antigen-presenting glycoprotein CD1d isoform X1
translation: MQLPHLLLFLFLLILLPGMWADSEAEPQVIQYLLTSVFANISSAEVSCVAVVGDIAILALDPDNWSIHFHWPWVSQAAAEDNGEKIMSQYKIALRNMIRFVHDTVQQTEQHYPLVVQFRAGCVLYPNTTSQGFLNVGWDGRDLTAFQVDKQGWEAQQPSQLAELVSKSLNRNKSLRILLEYLLSIWICQSNFLTLKRYGKEILERQELPVARVFTRTPSPDQLLLVCHVTGFYPRPISVAWLQDGQEVPPGPALNTSTILPNADLTYQLRSVLAVAPHDGHSYVCRVRHHSLGTRSLLIPWENRSTAPTISIIIAVLLLVATAFAGGFWWWKCRKGNGATWETQEFVI
SIO_010081: LOC110475413
subclass of: SO_0000673
so part of: LOC110475413
location: join(95847..95919,97119..97379,97925..98209,98315..98599,98723..98819,98945..98990)
location: region:95847-98990:1
so has part: feature:95847-95919:1:exon
so has part: feature:97119-97379:1:exon
so has part: feature:97925-98209:1:exon
so has part: feature:98315-98599:1:exon
so has part: feature:98723-98819:1:exon
so has part: feature:98945-98990:1:exon

XP_021395196.1
type: Protein
SIO_000068: ncbiprotein

position:95847:1
position: 95847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98990:1
position: 98990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95847-95919:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:97119-97379:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97925-98209:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:98315-98599:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:98723-98819:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:98945-98990:1:exon

LOC110475413
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110475413
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: antigen-presenting glycoprotein CD1d isoform X2
translation: MQLPHLLLFLFLLILLPGMWADSEEPQVIQYLLTSVFANISSAEVSCVAVVGDIAILALDPDNWSIHFHWPWVSQAAAEDNGEKIMSQYKIALRNMIRFVHDTVQQTEQHYPLVVQFRAGCVLYPNTTSQGFLNVGWDGRDLTAFQVDKQGWEAQQPSQLAELVSKSLNRNKSLRILLEYLLSIWICQSNFLTLKRYGKEILERQELPVARVFTRTPSPDQLLLVCHVTGFYPRPISVAWLQDGQEVPPGPALNTSTILPNADLTYQLRSVLAVAPHDGHSYVCRVRHHSLGTRSLLIPWENRSTAPTISIIIAVLLLVATAFAGGFWWWKCRKGNGATWETQEFVI
SIO_010081: LOC110475413
subclass of: SO_0000673
so part of: LOC110475413
location: join(95847..95919,97122..97379,97925..98209,98315..98599,98723..98819,98945..98990)
location: region:95847-98990:1
so has part: feature:95847-95919:1:exon
so has part: feature:97122-97379:1:exon
so has part: feature:97925-98209:1:exon
so has part: feature:98315-98599:1:exon
so has part: feature:98723-98819:1:exon
so has part: feature:98945-98990:1:exon

XP_021395197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95847-95919:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:97122-97379:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97925-98209:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:98315-98599:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:98723-98819:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:98945-98990:1:exon

BICD2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: BICD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 109897..160468
location: region:109897-160468:1
so has part: feature:109897-160468:1:exon
subclass of: SO_0000010

110475416
type: Gene
SIO_000068: ncbigene

position:109897:1
position: 109897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160468:1
position: 160468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109897-160468:1:exon

BICD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: BICD2
product: BICD cargo adaptor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021539525.2
SIO_010081: BICD2
subclass of: SO_0000673
so part of: BICD2
location: join(109897..110365,140033..140245,143109..143261,146060..146512,147494..148513,149582..149733,155065..160468)
location: region:109897-160468:1
so has part: feature:109897-110365:1:exon
so has part: feature:140033-140245:1:exon
so has part: feature:143109-143261:1:exon
so has part: feature:146060-146512:1:exon
so has part: feature:147494-148513:1:exon
so has part: feature:149582-149733:1:exon
so has part: feature:155065-160468:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:109897-110365:1:exon

position:110365:1
position: 110365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:140033-140245:1:exon

position:140033:1
position: 140033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140245:1
position: 140245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:143109-143261:1:exon

position:143109:1
position: 143109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143261:1
position: 143261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:146060-146512:1:exon

position:146060:1
position: 146060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146512:1
position: 146512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:147494-148513:1:exon

position:147494:1
position: 147494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148513:1
position: 148513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:149582-149733:1:exon

position:149582:1
position: 149582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149733:1
position: 149733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:155065-160468:1:exon

position:155065:1
position: 155065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BICD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: BICD2
product: BICD cargo adaptor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021539527.2
SIO_010081: BICD2
subclass of: SO_0000673
so part of: BICD2
location: join(109897..110365,140033..140245,143109..143261,146060..146512,147494..148513,149582..149733,155065..155275,158396..160468)
location: region:109897-160468:1
so has part: feature:109897-110365:1:exon
so has part: feature:140033-140245:1:exon
so has part: feature:143109-143261:1:exon
so has part: feature:146060-146512:1:exon
so has part: feature:147494-148513:1:exon
so has part: feature:149582-149733:1:exon
so has part: feature:155065-155275:1:exon
so has part: feature:158396-160468:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:109897-110365:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140033-140245:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:143109-143261:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:146060-146512:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:147494-148513:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:149582-149733:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:155065-155275:1:exon

position:155275:1
position: 155275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:158396-160468:1:exon

position:158396:1
position: 158396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BICD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: BICD2
product: BICD cargo adaptor 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021539529.2
SIO_010081: BICD2
subclass of: SO_0000673
so part of: BICD2
location: join(109897..110365,140033..140245,143109..143261,146060..146512,147494..148513,149582..149733,155065..155230,158396..160468)
location: region:109897-160468:1
so has part: feature:109897-110365:1:exon
so has part: feature:140033-140245:1:exon
so has part: feature:143109-143261:1:exon
so has part: feature:146060-146512:1:exon
so has part: feature:147494-148513:1:exon
so has part: feature:149582-149733:1:exon
so has part: feature:155065-155230:1:exon
so has part: feature:158396-160468:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:109897-110365:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140033-140245:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:143109-143261:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:146060-146512:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:147494-148513:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:149582-149733:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:155065-155230:1:exon

position:155230:1
position: 155230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:158396-160468:1:exon

BICD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: BICD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein bicaudal D homolog 2 isoform X2
translation: MSQAMEEEEYARLVMESEPEWLRSEIKRLFQELGETTREKIQAAEYGLAVLEEKQQLKQQYEELELEYETIRTEMEQLKEAFGQAHTNHKKVAADGESREETLIQESATKEEYYMKKVMELQTELKQIRNVLANTQSENERLNSVVQELKEINQNVEIQRARLRDDIKEYKFREARLLQDYTELEEENICLQKQVSVLKQSQVEFEGLKHEIKRLEEETEFLNSQLEDAIRLKEISERQLEEALETLKTEREQKNNLRKELSHYMNINDSMYNSHLNISLDGLKFSDEATEPNNDEIINGFEQNCLSKLSNGKNSTSTPKKSESFPPAPSLVSDLLSELNISEIQKLKQQLVQMEREKVNLLTTLQESQKQLENTRGALSEQHEKIGRLTENLNAMKKLQANKERQSALDNEKDRDSHEDGDYYEVDINGPEILECKYKVAVAEITDLKEELKNLKAKYKECVSKYEEEKSRYETESQALTEKITSLEKSSRHDREHMARLEKELKKVSDVAGETQGSLSVAQDELVTFSEELANLYHHVCMCNNETPNRVMLDYYKEGKGGCSSPEAKGRRSPILLSKGLLTVELGKAENGSGDSSPSPVSSLPSPVSDPQKEPMNIYNLIAIIRDQIKHLQAAVDRTTELSRQRVATQELGPVVDKDKEALMEEILKLKSLLSTKREQIATLRTVLKANKQTAEVALANLKSKYENEKAMVTETMMKLRNELKALKEDAATFSSLRAMFATRCDEYVTQLDEMQRQLAAAEDEKKTLNSLLRMAIQQKLALTQRLEHLELDHEQSKRVRTKSASKAKGSNPSL
SIO_010081: BICD2
subclass of: SO_0000673
so part of: BICD2
location: join(110126..110365,140033..140245,143109..143261,146060..146512,147494..148513,149582..149733,155065..155275,158396..158401)
location: region:110126-158401:1
so has part: feature:110126-110365:1:exon
so has part: feature:140033-140245:1:exon
so has part: feature:143109-143261:1:exon
so has part: feature:146060-146512:1:exon
so has part: feature:147494-148513:1:exon
so has part: feature:149582-149733:1:exon
so has part: feature:155065-155275:1:exon
so has part: feature:158396-158401:1:exon

XP_021395202.1
type: Protein
SIO_000068: ncbiprotein

position:110126:1
position: 110126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158401:1
position: 158401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110126-110365:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140033-140245:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:143109-143261:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:146060-146512:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:147494-148513:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:149582-149733:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:155065-155275:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:158396-158401:1:exon

BICD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: BICD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein bicaudal D homolog 2 isoform X3
translation: MSQAMEEEEYARLVMESEPEWLRSEIKRLFQELGETTREKIQAAEYGLAVLEEKQQLKQQYEELELEYETIRTEMEQLKEAFGQAHTNHKKVAADGESREETLIQESATKEEYYMKKVMELQTELKQIRNVLANTQSENERLNSVVQELKEINQNVEIQRARLRDDIKEYKFREARLLQDYTELEEENICLQKQVSVLKQSQVEFEGLKHEIKRLEEETEFLNSQLEDAIRLKEISERQLEEALETLKTEREQKNNLRKELSHYMNINDSMYNSHLNISLDGLKFSDEATEPNNDEIINGFEQNCLSKLSNGKNSTSTPKKSESFPPAPSLVSDLLSELNISEIQKLKQQLVQMEREKVNLLTTLQESQKQLENTRGALSEQHEKIGRLTENLNAMKKLQANKERQSALDNEKDRDSHEDGDYYEVDINGPEILECKYKVAVAEITDLKEELKNLKAKYKECVSKYEEEKSRYETESQALTEKITSLEKSSRHDREHMARLEKELKKVSDVAGETQGSLSVAQDELVTFSEELANLYHHVCMCNNETPNRVMLDYYKEGKGGCSSPEAKGRRSPILLSKGLLTVELGKAENGSGDSSPSPVSSLPSPVSDPQKEPMNIYNLIAIIRDQIKHLQAAVDRTTELSRQRVATQELGPVVDKDKEALMEEILKLKSLLSTKREQIATLRTVLKANKQTAEVALANLKSKYENEKAMVTETMMKLRNELKALKEDAATFSSLRAMFATRCDEYVTQLDEMQRQLAAAEDEKKTLNSLLRMAIQQKLALTQRLEHLELDHEQSKRL
SIO_010081: BICD2
subclass of: SO_0000673
so part of: BICD2
location: join(110126..110365,140033..140245,143109..143261,146060..146512,147494..148513,149582..149733,155065..155230,158396..158401)
location: region:110126-158401:1
so has part: feature:110126-110365:1:exon
so has part: feature:140033-140245:1:exon
so has part: feature:143109-143261:1:exon
so has part: feature:146060-146512:1:exon
so has part: feature:147494-148513:1:exon
so has part: feature:149582-149733:1:exon
so has part: feature:155065-155230:1:exon
so has part: feature:158396-158401:1:exon

XP_021395204.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110126-110365:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140033-140245:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:143109-143261:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:146060-146512:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:147494-148513:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:149582-149733:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:155065-155230:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:158396-158401:1:exon

BICD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: BICD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein bicaudal D homolog 2 isoform X1
translation: MSQAMEEEEYARLVMESEPEWLRSEIKRLFQELGETTREKIQAAEYGLAVLEEKQQLKQQYEELELEYETIRTEMEQLKEAFGQAHTNHKKVAADGESREETLIQESATKEEYYMKKVMELQTELKQIRNVLANTQSENERLNSVVQELKEINQNVEIQRARLRDDIKEYKFREARLLQDYTELEEENICLQKQVSVLKQSQVEFEGLKHEIKRLEEETEFLNSQLEDAIRLKEISERQLEEALETLKTEREQKNNLRKELSHYMNINDSMYNSHLNISLDGLKFSDEATEPNNDEIINGFEQNCLSKLSNGKNSTSTPKKSESFPPAPSLVSDLLSELNISEIQKLKQQLVQMEREKVNLLTTLQESQKQLENTRGALSEQHEKIGRLTENLNAMKKLQANKERQSALDNEKDRDSHEDGDYYEVDINGPEILECKYKVAVAEITDLKEELKNLKAKYKECVSKYEEEKSRYETESQALTEKITSLEKSSRHDREHMARLEKELKKVSDVAGETQGSLSVAQDELVTFSEELANLYHHVCMCNNETPNRVMLDYYKEGKGGCSSPEAKGRRSPILLSKGLLTVELGKAENGSGDSSPSPVSSLPSPVSDPQKEPMNIYNLIAIIRDQIKHLQAAVDRTTELSRQRVATQELGPVVDKDKEALMEEILKLKSLLSTKREQIATLRTVLKANKQTAEVALANLKSKYENEKAMVTETMMKLRNELKALKEDAATFSSLRAMFATRCDEYVTQLDEMQRQLAAAEDEKKTLNSLLRMAIQQKLALTQRLEHLELDHEQSKRVRTKSASKAKGSNPSVSPMCPMSCGDRSEGSVLNNQVFCSEKYKIYCD
SIO_010081: BICD2
subclass of: SO_0000673
so part of: BICD2
location: join(110126..110365,140033..140245,143109..143261,146060..146512,147494..148513,149582..149733,155065..155377)
location: region:110126-155377:1
so has part: feature:110126-110365:1:exon
so has part: feature:140033-140245:1:exon
so has part: feature:143109-143261:1:exon
so has part: feature:146060-146512:1:exon
so has part: feature:147494-148513:1:exon
so has part: feature:149582-149733:1:exon
so has part: feature:155065-155377:1:exon

XP_021395200.1
type: Protein
SIO_000068: ncbiprotein

position:155377:1
position: 155377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110126-110365:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140033-140245:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:143109-143261:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:146060-146512:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:147494-148513:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:149582-149733:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:155065-155377:1:exon

FGD3
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: FGD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 179573..286092
location: region:179573-286092:1
so has part: feature:179573-286092:1:exon
subclass of: SO_0000010

110475417
type: Gene
SIO_000068: ncbigene

position:179573:1
position: 179573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286092:1
position: 286092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179573-286092:1:exon

FGD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: FGD3
product: FYVE, RhoGEF and PH domain containing 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 28 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021539532.2
SIO_010081: FGD3
subclass of: SO_0000673
so part of: FGD3
location: join(179573..179800,240295..240465,245246..245414,246480..247077,252759..252848,254055..254191,255474..255630,259479..259617,260409..260467,262039..262185,262784..262876,264680..264759,265153..265183,265673..265774,270717..270779,274688..274810,277083..277235,278830..278970,284691..286092)
location: region:179573-286092:1
so has part: feature:179573-179800:1:exon
so has part: feature:240295-240465:1:exon
so has part: feature:245246-245414:1:exon
so has part: feature:246480-247077:1:exon
so has part: feature:252759-252848:1:exon
so has part: feature:254055-254191:1:exon
so has part: feature:255474-255630:1:exon
so has part: feature:259479-259617:1:exon
so has part: feature:260409-260467:1:exon
so has part: feature:262039-262185:1:exon
so has part: feature:262784-262876:1:exon
so has part: feature:264680-264759:1:exon
so has part: feature:265153-265183:1:exon
so has part: feature:265673-265774:1:exon
so has part: feature:270717-270779:1:exon
so has part: feature:274688-274810:1:exon
so has part: feature:277083-277235:1:exon
so has part: feature:278830-278970:1:exon
so has part: feature:284691-286092:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:179573-179800:1:exon

position:179800:1
position: 179800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:240295-240465:1:exon

position:240295:1
position: 240295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240465:1
position: 240465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:245246-245414:1:exon

position:245246:1
position: 245246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245414:1
position: 245414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:246480-247077:1:exon

position:246480:1
position: 246480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247077:1
position: 247077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:252759-252848:1:exon

position:252759:1
position: 252759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252848:1
position: 252848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:254055-254191:1:exon

position:254055:1
position: 254055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254191:1
position: 254191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:255474-255630:1:exon

position:255474:1
position: 255474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255630:1
position: 255630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:259479-259617:1:exon

position:259479:1
position: 259479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259617:1
position: 259617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:260409-260467:1:exon

position:260409:1
position: 260409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260467:1
position: 260467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:262039-262185:1:exon

position:262039:1
position: 262039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262185:1
position: 262185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:262784-262876:1:exon

position:262784:1
position: 262784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262876:1
position: 262876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:264680-264759:1:exon

position:264680:1
position: 264680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264759:1
position: 264759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:265153-265183:1:exon

position:265153:1
position: 265153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265183:1
position: 265183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:265673-265774:1:exon

position:265673:1
position: 265673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265774:1
position: 265774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:270717-270779:1:exon

position:270717:1
position: 270717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270779:1
position: 270779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:274688-274810:1:exon

position:274688:1
position: 274688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274810:1
position: 274810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:277083-277235:1:exon

position:277083:1
position: 277083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277235:1
position: 277235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:278830-278970:1:exon

position:278830:1
position: 278830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278970:1
position: 278970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:284691-286092:1:exon

position:284691:1
position: 284691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: FGD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FYVE, RhoGEF and PH domain-containing protein 3 isoform X3
translation: MEPEGCPCSPFQIKCHIDSNPVLEACGELQHISSGQCLHQAGRKPKTKTALAKMHPLQKPQVPPKPVHLKPGQERIPPAPSRPLPADPKSSRNLAPGEEEIPISAGVNTLIEKFESIRQPVHILQRNQLNLALKMEPGLDSSKQMSLCDCDTVASSDSSTNDKTELDEAEPSILCSTDLTNTDIMKIKELSIGDNKSHEDCTVVTVSKESQEELGTKDSTAELNGNGKIPNRDSGIDSPSCSVAGETFPSEEGAEQKKPSMAGNPGEMEPDRKGTKPSSVEQKRDSMQDDDSDIDEGSSEEQEIAEVPKLEYLDVNKCTEPQKLFNIANELLHTEEAYVKRLHLLDQVFCTKLSEAGISSEVITGIFSNISSIYCFHGQFLLPELKTRITEEWSVNPRLGDILQKLAPFLKMYGEYVKNFDRAMDIVNTCMQRSSSFKDVVQNIQKQEVCGNLTLQHHMLEPVQRIPRYELLLKDYLKKLPEESPDRKDAEKSLELISTAANHSNAAIRKMEKMHKLLEVYERLGGEEDIVNPANELIKEGHIQKLSAKNGTAQDRYLFLFNSMVLYCVPKLRLIGQKFSVREKMDIAGLQVQEIAKQNVAHTFSITGKKRSLELQARTEEEKREWIHVIQATIEKHKQNSETFRAFNSSFSQEEDHLPDSSIASTSSVESMPGADGGGALGGSDSSKKSSKSKRDKEKQSCKSCGESFNSITKRRHHCKQCGAVICAKCSEFKPLADNSRHNRVCKECFLQLPASPCSPGVEAVGEQKKRLAAEKQGILMAENSLFSSYLQFLEKGKTWYKMWVTIPKSEPLVLYLQGSSQDGRSPRPIPLPGYEVSLPGSGEKFDVKHVFKLCQSHQTLYFSAEDEDLQIKWMEILTKAAKGETEDTAEGLSNP
SIO_010081: FGD3
subclass of: SO_0000673
so part of: FGD3
location: join(179788..179800,240295..240465,245246..245414,246480..247077,252759..252848,254055..254191,255474..255630,259479..259617,260409..260467,262039..262185,262784..262876,264680..264759,265153..265183,265673..265774,270717..270779,274688..274810,277083..277235,278830..278970,284691..284915)
location: region:179788-284915:1
so has part: feature:179788-179800:1:exon
so has part: feature:240295-240465:1:exon
so has part: feature:245246-245414:1:exon
so has part: feature:246480-247077:1:exon
so has part: feature:252759-252848:1:exon
so has part: feature:254055-254191:1:exon
so has part: feature:255474-255630:1:exon
so has part: feature:259479-259617:1:exon
so has part: feature:260409-260467:1:exon
so has part: feature:262039-262185:1:exon
so has part: feature:262784-262876:1:exon
so has part: feature:264680-264759:1:exon
so has part: feature:265153-265183:1:exon
so has part: feature:265673-265774:1:exon
so has part: feature:270717-270779:1:exon
so has part: feature:274688-274810:1:exon
so has part: feature:277083-277235:1:exon
so has part: feature:278830-278970:1:exon
so has part: feature:284691-284915:1:exon

XP_021395207.1
type: Protein
SIO_000068: ncbiprotein

position:179788:1
position: 179788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284915:1
position: 284915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179788-179800:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:240295-240465:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:245246-245414:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:246480-247077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252759-252848:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:254055-254191:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:255474-255630:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:259479-259617:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:260409-260467:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:262039-262185:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:262784-262876:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:264680-264759:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:265153-265183:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:265673-265774:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:270717-270779:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:274688-274810:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:277083-277235:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:278830-278970:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:284691-284915:1:exon

FGD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: FGD3
product: FYVE, RhoGEF and PH domain containing 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021539531.1
SIO_010081: FGD3
subclass of: SO_0000673
so part of: FGD3
location: join(210656..210834,240295..240465,245246..245414,246480..247077,252759..252848,254055..254191,255474..255630,259479..259617,260409..260467,262039..262185,262784..262876,264680..264759,265153..265183,265673..265774,270717..270779,274688..274810,277083..277235,278830..278970,283030..283118,284691..286092)
location: region:210656-286092:1
so has part: feature:210656-210834:1:exon
so has part: feature:240295-240465:1:exon
so has part: feature:245246-245414:1:exon
so has part: feature:246480-247077:1:exon
so has part: feature:252759-252848:1:exon
so has part: feature:254055-254191:1:exon
so has part: feature:255474-255630:1:exon
so has part: feature:259479-259617:1:exon
so has part: feature:260409-260467:1:exon
so has part: feature:262039-262185:1:exon
so has part: feature:262784-262876:1:exon
so has part: feature:264680-264759:1:exon
so has part: feature:265153-265183:1:exon
so has part: feature:265673-265774:1:exon
so has part: feature:270717-270779:1:exon
so has part: feature:274688-274810:1:exon
so has part: feature:277083-277235:1:exon
so has part: feature:278830-278970:1:exon
so has part: feature:283030-283118:1:exon
so has part: feature:284691-286092:1:exon

position:210656:1
position: 210656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210656-210834:1:exon

position:210834:1
position: 210834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:240295-240465:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:245246-245414:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:246480-247077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252759-252848:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:254055-254191:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:255474-255630:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:259479-259617:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:260409-260467:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:262039-262185:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:262784-262876:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:264680-264759:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:265153-265183:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:265673-265774:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:270717-270779:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:274688-274810:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:277083-277235:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:278830-278970:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:283030-283118:1:exon

position:283030:1
position: 283030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283118:1
position: 283118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:284691-286092:1:exon

FGD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: FGD3
product: FYVE, RhoGEF and PH domain containing 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 28 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021539530.1
SIO_010081: FGD3
subclass of: SO_0000673
so part of: FGD3
location: join(210656..210834,240295..240465,245246..245414,246480..247077,252759..252848,254055..254191,255474..255630,259479..259617,260409..260467,262039..262185,262784..262876,264680..264759,265153..265183,265673..265774,270717..270779,274688..274810,277083..277235,278830..278970,284691..286092)
location: region:210656-286092:1
so has part: feature:210656-210834:1:exon
so has part: feature:240295-240465:1:exon
so has part: feature:245246-245414:1:exon
so has part: feature:246480-247077:1:exon
so has part: feature:252759-252848:1:exon
so has part: feature:254055-254191:1:exon
so has part: feature:255474-255630:1:exon
so has part: feature:259479-259617:1:exon
so has part: feature:260409-260467:1:exon
so has part: feature:262039-262185:1:exon
so has part: feature:262784-262876:1:exon
so has part: feature:264680-264759:1:exon
so has part: feature:265153-265183:1:exon
so has part: feature:265673-265774:1:exon
so has part: feature:270717-270779:1:exon
so has part: feature:274688-274810:1:exon
so has part: feature:277083-277235:1:exon
so has part: feature:278830-278970:1:exon
so has part: feature:284691-286092:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:210656-210834:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:240295-240465:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:245246-245414:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:246480-247077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252759-252848:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:254055-254191:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:255474-255630:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:259479-259617:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:260409-260467:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:262039-262185:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:262784-262876:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:264680-264759:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:265153-265183:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:265673-265774:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:270717-270779:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:274688-274810:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:277083-277235:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:278830-278970:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:284691-286092:1:exon

FGD3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 299123
gene: FGD3
product: FYVE, RhoGEF and PH domain containing 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002466267.1
SIO_010081: FGD3
so part of: FGD3
location: join(210656..210834,240295..240465,245246..245414,246480..247077,252759..252848,254055..254191,255474..255630,259479..259617,260409..260467,262039..262185,262784..262876,264680..264759,265153..265183,265673..265774,270717..270779,274688..274810,277083..277235,278830..278970,283026..283118,284691..284911)
location: region:210656-284911:1
so has part: feature:210656-210834:1:exon
so has part: feature:240295-240465:1:exon
so has part: feature:245246-245414:1:exon
so has part: feature:246480-247077:1:exon
so has part: feature:252759-252848:1:exon
so has part: feature:254055-254191:1:exon
so has part: feature:255474-255630:1:exon
so has part: feature:259479-259617:1:exon
so has part: feature:260409-260467:1:exon
so has part: feature:262039-262185:1:exon
so has part: feature:262784-262876:1:exon
so has part: feature:264680-264759:1:exon
so has part: feature:265153-265183:1:exon
so has part: feature:265673-265774:1:exon
so has part: feature:270717-270779:1:exon
so has part: feature:274688-274810:1:exon
so has part: feature:277083-277235:1:exon
so has part: feature:278830-278970:1:exon
so has part: feature:283026-283118:1:exon
so has part: feature:284691-284911:1:exon

position:284911:1
position: 284911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210656-210834:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:240295-240465:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:245246-245414:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:246480-247077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252759-252848:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:254055-254191:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:255474-255630:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:259479-259617:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:260409-260467:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:262039-262185:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:262784-262876:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:264680-264759:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:265153-265183:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:265673-265774:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:270717-270779:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:274688-274810:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:277083-277235:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:278830-278970:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:283026-283118:1:exon

position:283026:1
position: 283026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:284691-284911:1:exon

FGD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: FGD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FYVE, RhoGEF and PH domain-containing protein 3 isoform X1
translation: MNIKKGKSLNLAGQFLLGRPCSRKEQATFKWPSVHILLSCPCSPFQIKCHIDSNPVLEACGELQHISSGQCLHQAGRKPKTKTALAKMHPLQKPQVPPKPVHLKPGQERIPPAPSRPLPADPKSSRNLAPGEEEIPISAGVNTLIEKFESIRQPVHILQRNQLNLALKMEPGLDSSKQMSLCDCDTVASSDSSTNDKTELDEAEPSILCSTDLTNTDIMKIKELSIGDNKSHEDCTVVTVSKESQEELGTKDSTAELNGNGKIPNRDSGIDSPSCSVAGETFPSEEGAEQKKPSMAGNPGEMEPDRKGTKPSSVEQKRDSMQDDDSDIDEGSSEEQEIAEVPKLEYLDVNKCTEPQKLFNIANELLHTEEAYVKRLHLLDQVFCTKLSEAGISSEVITGIFSNISSIYCFHGQFLLPELKTRITEEWSVNPRLGDILQKLAPFLKMYGEYVKNFDRAMDIVNTCMQRSSSFKDVVQNIQKQEVCGNLTLQHHMLEPVQRIPRYELLLKDYLKKLPEESPDRKDAEKSLELISTAANHSNAAIRKMEKMHKLLEVYERLGGEEDIVNPANELIKEGHIQKLSAKNGTAQDRYLFLFNSMVLYCVPKLRLIGQKFSVREKMDIAGLQVQEIAKQNVAHTFSITGKKRSLELQARTEEEKREWIHVIQATIEKHKQNSETFRAFNSSFSQEEDHLPDSSIASTSSVESMPGADGGGALGGSDSSKKSSKSKRDKEKQSCKSCGESFNSITKRRHHCKQCGAVICAKCSEFKPLADNSRHNRVCKECFLQLPASPCSPGVEAVGEQKKRLAAEKQGILMAENSLFSSYLQFLEKGKTWYKMWVTIPKSEPLVLYLQGSSQDGRSPRPIPLPGYEVSLPGSGEKFDVKHVFKLCQSHQTLYFSAEDEDLQIKWMEILTKAAKGETEDTAEGLSNP
SIO_010081: FGD3
subclass of: SO_0000673
so part of: FGD3
location: join(210720..210834,240295..240465,245246..245414,246480..247077,252759..252848,254055..254191,255474..255630,259479..259617,260409..260467,262039..262185,262784..262876,264680..264759,265153..265183,265673..265774,270717..270779,274688..274810,277083..277235,278830..278970,284691..284915)
location: region:210720-284915:1
so has part: feature:210720-210834:1:exon
so has part: feature:240295-240465:1:exon
so has part: feature:245246-245414:1:exon
so has part: feature:246480-247077:1:exon
so has part: feature:252759-252848:1:exon
so has part: feature:254055-254191:1:exon
so has part: feature:255474-255630:1:exon
so has part: feature:259479-259617:1:exon
so has part: feature:260409-260467:1:exon
so has part: feature:262039-262185:1:exon
so has part: feature:262784-262876:1:exon
so has part: feature:264680-264759:1:exon
so has part: feature:265153-265183:1:exon
so has part: feature:265673-265774:1:exon
so has part: feature:270717-270779:1:exon
so has part: feature:274688-274810:1:exon
so has part: feature:277083-277235:1:exon
so has part: feature:278830-278970:1:exon
so has part: feature:284691-284915:1:exon

XP_021395205.1
type: Protein
SIO_000068: ncbiprotein

position:210720:1
position: 210720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210720-210834:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:240295-240465:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:245246-245414:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:246480-247077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252759-252848:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:254055-254191:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:255474-255630:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:259479-259617:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:260409-260467:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:262039-262185:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:262784-262876:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:264680-264759:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:265153-265183:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:265673-265774:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:270717-270779:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:274688-274810:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:277083-277235:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:278830-278970:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:284691-284915:1:exon

FGD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: FGD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FYVE, RhoGEF and PH domain-containing protein 3 isoform X2
translation: MNIKKGKSLNLAGQFLLGRPCSRKEQATFKWPSVHILLSCPCSPFQIKCHIDSNPVLEACGELQHISSGQCLHQAGRKPKTKTALAKMHPLQKPQVPPKPVHLKPGQERIPPAPSRPLPADPKSSRNLAPGEEEIPISAGVNTLIEKFESIRQPVHILQRNQLNLALKMEPGLDSSKQMSLCDCDTVASSDSSTNDKTELDEAEPSILCSTDLTNTDIMKIKELSIGDNKSHEDCTVVTVSKESQEELGTKDSTAELNGNGKIPNRDSGIDSPSCSVAGETFPSEEGAEQKKPSMAGNPGEMEPDRKGTKPSSVEQKRDSMQDDDSDIDEGSSEEQEIAEVPKLEYLDVNKCTEPQKLFNIANELLHTEEAYVKRLHLLDQVFCTKLSEAGISSEVITGIFSNISSIYCFHGQFLLPELKTRITEEWSVNPRLGDILQKLAPFLKMYGEYVKNFDRAMDIVNTCMQRSSSFKDVVQNIQKQEVCGNLTLQHHMLEPVQRIPRYELLLKDYLKKLPEESPDRKDAEKSLELISTAANHSNAAIRKMEKMHKLLEVYERLGGEEDIVNPANELIKEGHIQKLSAKNGTAQDRYLFLFNSMVLYCVPKLRLIGQKFSVREKMDIAGLQVQEIAKQNVAHTFSITGKKRSLELQARTEEEKREWIHVIQATIEKHKQNSETFRAFNSSFSQEEDHLPDSSIASTSSVESMPGADGGGALGGSDSSKKSSKSKRDKEKQSCKSCGESFNSITKRRHHCKQCGAVICAKCSEFKPLADNSRHNRVCKECFLQLPASPCSPGVEAVGEQKKRLAAEKQGILMAENSLFSSYLQFLEKGKTWYKMWVTIPKSEPLVLYLQGSSQVQAKCQGQHIKGGCKTKGRLLNLPVSAHVGMDEAHVQSLCLAMKSVYQVLVRSLM
SIO_010081: FGD3
subclass of: SO_0000673
so part of: FGD3
location: join(210720..210834,240295..240465,245246..245414,246480..247077,252759..252848,254055..254191,255474..255630,259479..259617,260409..260467,262039..262185,262784..262876,264680..264759,265153..265183,265673..265774,270717..270779,274688..274810,277083..277235,278830..278970,283030..283118,284691..284769)
location: region:210720-284769:1
so has part: feature:210720-210834:1:exon
so has part: feature:240295-240465:1:exon
so has part: feature:245246-245414:1:exon
so has part: feature:246480-247077:1:exon
so has part: feature:252759-252848:1:exon
so has part: feature:254055-254191:1:exon
so has part: feature:255474-255630:1:exon
so has part: feature:259479-259617:1:exon
so has part: feature:260409-260467:1:exon
so has part: feature:262039-262185:1:exon
so has part: feature:262784-262876:1:exon
so has part: feature:264680-264759:1:exon
so has part: feature:265153-265183:1:exon
so has part: feature:265673-265774:1:exon
so has part: feature:270717-270779:1:exon
so has part: feature:274688-274810:1:exon
so has part: feature:277083-277235:1:exon
so has part: feature:278830-278970:1:exon
so has part: feature:283030-283118:1:exon
so has part: feature:284691-284769:1:exon

XP_021395206.1
type: Protein
SIO_000068: ncbiprotein

position:284769:1
position: 284769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210720-210834:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:240295-240465:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:245246-245414:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:246480-247077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252759-252848:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:254055-254191:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:255474-255630:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:259479-259617:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:260409-260467:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:262039-262185:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:262784-262876:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:264680-264759:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:265153-265183:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:265673-265774:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:270717-270779:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:274688-274810:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:277083-277235:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:278830-278970:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:283030-283118:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:284691-284769:1:exon

FGD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: FGD3
product: FYVE, RhoGEF and PH domain containing 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 28 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021539533.2
SIO_010081: FGD3
subclass of: SO_0000673
so part of: FGD3
location: join(210724..210989,240295..240465,245246..245414,246480..247077,252759..252848,254055..254191,255474..255630,259479..259617,260409..260467,262039..262185,262784..262876,264680..264759,265153..265183,265673..265774,270717..270779,274688..274810,277083..277235,278830..278970,284691..286092)
location: region:210724-286092:1
so has part: feature:210724-210989:1:exon
so has part: feature:240295-240465:1:exon
so has part: feature:245246-245414:1:exon
so has part: feature:246480-247077:1:exon
so has part: feature:252759-252848:1:exon
so has part: feature:254055-254191:1:exon
so has part: feature:255474-255630:1:exon
so has part: feature:259479-259617:1:exon
so has part: feature:260409-260467:1:exon
so has part: feature:262039-262185:1:exon
so has part: feature:262784-262876:1:exon
so has part: feature:264680-264759:1:exon
so has part: feature:265153-265183:1:exon
so has part: feature:265673-265774:1:exon
so has part: feature:270717-270779:1:exon
so has part: feature:274688-274810:1:exon
so has part: feature:277083-277235:1:exon
so has part: feature:278830-278970:1:exon
so has part: feature:284691-286092:1:exon

position:210724:1
position: 210724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210724-210989:1:exon

position:210989:1
position: 210989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:240295-240465:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:245246-245414:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:246480-247077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252759-252848:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:254055-254191:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:255474-255630:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:259479-259617:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:260409-260467:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:262039-262185:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:262784-262876:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:264680-264759:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:265153-265183:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:265673-265774:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:270717-270779:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:274688-274810:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:277083-277235:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:278830-278970:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:284691-286092:1:exon

FGD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: FGD3
product: FYVE, RhoGEF and PH domain containing 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 28 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021539534.1
SIO_010081: FGD3
subclass of: SO_0000673
so part of: FGD3
location: join(237470..237558,240295..240465,245246..245414,246480..247077,252759..252848,254055..254191,255474..255630,259479..259617,260409..260467,262039..262185,262784..262876,264680..264759,265153..265183,265673..265774,270717..270779,274688..274810,277083..277235,278830..278970,284691..286092)
location: region:237470-286092:1
so has part: feature:237470-237558:1:exon
so has part: feature:240295-240465:1:exon
so has part: feature:245246-245414:1:exon
so has part: feature:246480-247077:1:exon
so has part: feature:252759-252848:1:exon
so has part: feature:254055-254191:1:exon
so has part: feature:255474-255630:1:exon
so has part: feature:259479-259617:1:exon
so has part: feature:260409-260467:1:exon
so has part: feature:262039-262185:1:exon
so has part: feature:262784-262876:1:exon
so has part: feature:264680-264759:1:exon
so has part: feature:265153-265183:1:exon
so has part: feature:265673-265774:1:exon
so has part: feature:270717-270779:1:exon
so has part: feature:274688-274810:1:exon
so has part: feature:277083-277235:1:exon
so has part: feature:278830-278970:1:exon
so has part: feature:284691-286092:1:exon

position:237470:1
position: 237470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237470-237558:1:exon

position:237558:1
position: 237558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:240295-240465:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:245246-245414:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:246480-247077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252759-252848:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:254055-254191:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:255474-255630:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:259479-259617:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:260409-260467:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:262039-262185:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:262784-262876:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:264680-264759:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:265153-265183:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:265673-265774:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:270717-270779:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:274688-274810:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:277083-277235:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:278830-278970:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:284691-286092:1:exon

FGD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: FGD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FYVE, RhoGEF and PH domain-containing protein 3 isoform X4
translation: MHPLQKPQVPPKPVHLKPGQERIPPAPSRPLPADPKSSRNLAPGEEEIPISAGVNTLIEKFESIRQPVHILQRNQLNLALKMEPGLDSSKQMSLCDCDTVASSDSSTNDKTELDEAEPSILCSTDLTNTDIMKIKELSIGDNKSHEDCTVVTVSKESQEELGTKDSTAELNGNGKIPNRDSGIDSPSCSVAGETFPSEEGAEQKKPSMAGNPGEMEPDRKGTKPSSVEQKRDSMQDDDSDIDEGSSEEQEIAEVPKLEYLDVNKCTEPQKLFNIANELLHTEEAYVKRLHLLDQVFCTKLSEAGISSEVITGIFSNISSIYCFHGQFLLPELKTRITEEWSVNPRLGDILQKLAPFLKMYGEYVKNFDRAMDIVNTCMQRSSSFKDVVQNIQKQEVCGNLTLQHHMLEPVQRIPRYELLLKDYLKKLPEESPDRKDAEKSLELISTAANHSNAAIRKMEKMHKLLEVYERLGGEEDIVNPANELIKEGHIQKLSAKNGTAQDRYLFLFNSMVLYCVPKLRLIGQKFSVREKMDIAGLQVQEIAKQNVAHTFSITGKKRSLELQARTEEEKREWIHVIQATIEKHKQNSETFRAFNSSFSQEEDHLPDSSIASTSSVESMPGADGGGALGGSDSSKKSSKSKRDKEKQSCKSCGESFNSITKRRHHCKQCGAVICAKCSEFKPLADNSRHNRVCKECFLQLPASPCSPGVEAVGEQKKRLAAEKQGILMAENSLFSSYLQFLEKGKTWYKMWVTIPKSEPLVLYLQGSSQDGRSPRPIPLPGYEVSLPGSGEKFDVKHVFKLCQSHQTLYFSAEDEDLQIKWMEILTKAAKGETEDTAEGLSNP
SIO_010081: FGD3
subclass of: SO_0000673
so part of: FGD3
location: join(240441..240465,245246..245414,246480..247077,252759..252848,254055..254191,255474..255630,259479..259617,260409..260467,262039..262185,262784..262876,264680..264759,265153..265183,265673..265774,270717..270779,274688..274810,277083..277235,278830..278970,284691..284915)
location: region:240441-284915:1
so has part: feature:240441-240465:1:exon
so has part: feature:245246-245414:1:exon
so has part: feature:246480-247077:1:exon
so has part: feature:252759-252848:1:exon
so has part: feature:254055-254191:1:exon
so has part: feature:255474-255630:1:exon
so has part: feature:259479-259617:1:exon
so has part: feature:260409-260467:1:exon
so has part: feature:262039-262185:1:exon
so has part: feature:262784-262876:1:exon
so has part: feature:264680-264759:1:exon
so has part: feature:265153-265183:1:exon
so has part: feature:265673-265774:1:exon
so has part: feature:270717-270779:1:exon
so has part: feature:274688-274810:1:exon
so has part: feature:277083-277235:1:exon
so has part: feature:278830-278970:1:exon
so has part: feature:284691-284915:1:exon

XP_021395208.1
type: Protein
SIO_000068: ncbiprotein

position:240441:1
position: 240441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240441-240465:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:245246-245414:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:246480-247077:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:252759-252848:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:254055-254191:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:255474-255630:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:259479-259617:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260409-260467:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:262039-262185:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:262784-262876:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:264680-264759:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:265153-265183:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:265673-265774:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:270717-270779:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:274688-274810:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:277083-277235:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:278830-278970:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:284691-284915:1:exon

FGD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: FGD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FYVE, RhoGEF and PH domain-containing protein 3 isoform X4
translation: MHPLQKPQVPPKPVHLKPGQERIPPAPSRPLPADPKSSRNLAPGEEEIPISAGVNTLIEKFESIRQPVHILQRNQLNLALKMEPGLDSSKQMSLCDCDTVASSDSSTNDKTELDEAEPSILCSTDLTNTDIMKIKELSIGDNKSHEDCTVVTVSKESQEELGTKDSTAELNGNGKIPNRDSGIDSPSCSVAGETFPSEEGAEQKKPSMAGNPGEMEPDRKGTKPSSVEQKRDSMQDDDSDIDEGSSEEQEIAEVPKLEYLDVNKCTEPQKLFNIANELLHTEEAYVKRLHLLDQVFCTKLSEAGISSEVITGIFSNISSIYCFHGQFLLPELKTRITEEWSVNPRLGDILQKLAPFLKMYGEYVKNFDRAMDIVNTCMQRSSSFKDVVQNIQKQEVCGNLTLQHHMLEPVQRIPRYELLLKDYLKKLPEESPDRKDAEKSLELISTAANHSNAAIRKMEKMHKLLEVYERLGGEEDIVNPANELIKEGHIQKLSAKNGTAQDRYLFLFNSMVLYCVPKLRLIGQKFSVREKMDIAGLQVQEIAKQNVAHTFSITGKKRSLELQARTEEEKREWIHVIQATIEKHKQNSETFRAFNSSFSQEEDHLPDSSIASTSSVESMPGADGGGALGGSDSSKKSSKSKRDKEKQSCKSCGESFNSITKRRHHCKQCGAVICAKCSEFKPLADNSRHNRVCKECFLQLPASPCSPGVEAVGEQKKRLAAEKQGILMAENSLFSSYLQFLEKGKTWYKMWVTIPKSEPLVLYLQGSSQDGRSPRPIPLPGYEVSLPGSGEKFDVKHVFKLCQSHQTLYFSAEDEDLQIKWMEILTKAAKGETEDTAEGLSNP
SIO_010081: FGD3
subclass of: SO_0000673
so part of: FGD3
location: join(240441..240465,245246..245414,246480..247077,252759..252848,254055..254191,255474..255630,259479..259617,260409..260467,262039..262185,262784..262876,264680..264759,265153..265183,265673..265774,270717..270779,274688..274810,277083..277235,278830..278970,284691..284915)
location: region:240441-284915:1
so has part: feature:240441-240465:1:exon
so has part: feature:245246-245414:1:exon
so has part: feature:246480-247077:1:exon
so has part: feature:252759-252848:1:exon
so has part: feature:254055-254191:1:exon
so has part: feature:255474-255630:1:exon
so has part: feature:259479-259617:1:exon
so has part: feature:260409-260467:1:exon
so has part: feature:262039-262185:1:exon
so has part: feature:262784-262876:1:exon
so has part: feature:264680-264759:1:exon
so has part: feature:265153-265183:1:exon
so has part: feature:265673-265774:1:exon
so has part: feature:270717-270779:1:exon
so has part: feature:274688-274810:1:exon
so has part: feature:277083-277235:1:exon
so has part: feature:278830-278970:1:exon
so has part: feature:284691-284915:1:exon

XP_021395209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:240441-240465:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:245246-245414:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:246480-247077:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:252759-252848:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:254055-254191:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:255474-255630:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:259479-259617:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260409-260467:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:262039-262185:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:262784-262876:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:264680-264759:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:265153-265183:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:265673-265774:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:270717-270779:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:274688-274810:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:277083-277235:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:278830-278970:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:284691-284915:1:exon

SUSD3
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SUSD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 296574..318940
location: region:296574-318940:1
so has part: feature:296574-318940:1:exon
subclass of: SO_0000010

110475419
type: Gene
SIO_000068: ncbigene

position:296574:1
position: 296574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318940:1
position: 318940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296574-318940:1:exon

SUSD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SUSD3
product: sushi domain containing 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031505977.1
SIO_010081: SUSD3
subclass of: SO_0000673
so part of: SUSD3
location: join(296574..296723,309735..309998,312282..312429,315248..315412,316035..316108,318717..318940)
location: region:296574-318940:1
so has part: feature:296574-296723:1:exon
so has part: feature:309735-309998:1:exon
so has part: feature:312282-312429:1:exon
so has part: feature:315248-315412:1:exon
so has part: feature:316035-316108:1:exon
so has part: feature:318717-318940:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296574-296723:1:exon

position:296723:1
position: 296723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:309735-309998:1:exon

position:309735:1
position: 309735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309998:1
position: 309998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:312282-312429:1:exon

position:312282:1
position: 312282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312429:1
position: 312429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:315248-315412:1:exon

position:315248:1
position: 315248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315412:1
position: 315412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:316035-316108:1:exon

position:316035:1
position: 316035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316108:1
position: 316108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:318717-318940:1:exon

position:318717:1
position: 318717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SUSD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SUSD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sushi domain-containing protein 3
translation: MPAATTPGLDALRSSALGRDSGGPRGYTVDCEQHFSGWLHCWRRRCSVCVWSAGQCSRLLSPQLGSLQVLHGNGTGVGTVVAFRCSAEHRLQGPAVVTCVWKGNSTQWTAAVPSCAPVSKYETFGFKVAVIASIVSCAVILLMSMAFLTCCLIKCAKKSERRRTQREMHLWCQLRTEELEHMQAAYFGFKGRNNNNNKKLRNTSVFGDVTNMAYDNQGFYREAAPSAGLPEKRLLRQDSQRSGSFGIDFLRNGYYKDPKGLRWAFGIDAVEAEDIKQLHTLPGLSEIPSAVGLQGWKSNACQLRPRQCTAGSIGRIEMP
SIO_010081: SUSD3
subclass of: SO_0000673
so part of: SUSD3
location: join(296639..296723,309735..309998,312282..312429,315248..315412,316035..316108,318717..318940)
location: region:296639-318940:1
so has part: feature:296639-296723:1:exon
so has part: feature:309735-309998:1:exon
so has part: feature:312282-312429:1:exon
so has part: feature:315248-315412:1:exon
so has part: feature:316035-316108:1:exon
so has part: feature:318717-318940:1:exon

XP_031361837.1
type: Protein
SIO_000068: ncbiprotein

position:296639:1
position: 296639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296639-296723:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:309735-309998:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:312282-312429:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:315248-315412:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:316035-316108:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:318717-318940:1:exon

CARD19
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: CARD19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 335297..350807
location: region:335297-350807:1
so has part: feature:335297-350807:1:exon
subclass of: SO_0000010

110475420
type: Gene
SIO_000068: ncbigene

position:335297:1
position: 335297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350807:1
position: 350807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335297-350807:1:exon

CARD19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: CARD19
product: caspase recruitment domain family member 19
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021539537.2
SIO_010081: CARD19
subclass of: SO_0000673
so part of: CARD19
location: join(335297..335497,340338..340480,342357..342510,347456..347527,348261..350807)
location: region:335297-350807:1
so has part: feature:335297-335497:1:exon
so has part: feature:340338-340480:1:exon
so has part: feature:342357-342510:1:exon
so has part: feature:347456-347527:1:exon
so has part: feature:348261-350807:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:335297-335497:1:exon

position:335497:1
position: 335497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:340338-340480:1:exon

position:340338:1
position: 340338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340480:1
position: 340480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:342357-342510:1:exon

position:342357:1
position: 342357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342510:1
position: 342510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:347456-347527:1:exon

position:347456:1
position: 347456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347527:1
position: 347527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:348261-350807:1:exon

position:348261:1
position: 348261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CARD19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: CARD19
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: caspase recruitment domain-containing protein 19
translation: MASVKNGTTLPVLKVIAAFILIKKKGLKQGGPRAEQGRSRRGCCSXGAGCSGQRCPRCSRWSGADSVDQSYCHRLQHDMYFLTSTSRLNEQVVDKIVLQLNRVYPQILTNEEAEKFRNPKASLHTRLSDLLKHLQKKGDRHCQEFYRALQINAELLFNDLPSRKILSPVFFLACFSMAAGLALFWYCCNSETQVTGRARRILGFSPIIIGRHVRNICMLYLEDMSKN
SIO_010081: CARD19
subclass of: SO_0000673
so part of: CARD19
location: join(335297..335497,340338..340480,342357..342510,347456..347527,348261..348373)
location: region:335297-348373:1
so has part: feature:335297-335497:1:exon
so has part: feature:340338-340480:1:exon
so has part: feature:342357-342510:1:exon
so has part: feature:347456-347527:1:exon
so has part: feature:348261-348373:1:exon

XP_021395212.2
type: Protein
SIO_000068: ncbiprotein

position:348373:1
position: 348373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335297-335497:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:340338-340480:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:342357-342510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:347456-347527:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:348261-348373:1:exon

NINJ1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: NINJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(338468..371581)
location: region:338468-371581:-1
so has part: feature:338468-371581:-1:exon
subclass of: SO_0000010

110475421
type: Gene
SIO_000068: ncbigene

position:338468:-1
position: 338468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371581:-1
position: 371581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338468-371581:-1:exon

NINJ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: NINJ1
product: ninjurin 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021539543.2
SIO_010081: NINJ1
subclass of: SO_0000673
so part of: NINJ1
location: complement(join(338468..338806,360083..360244,364069..364303,371258..371581))
location: region:338468-371581:-1
so has part: feature:371258-371581:-1:exon
so has part: feature:364069-364303:-1:exon
so has part: feature:360083-360244:-1:exon
so has part: feature:338468-338806:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:371258-371581:-1:exon

position:371258:-1
position: 371258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:364069-364303:-1:exon

position:364069:-1
position: 364069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364303:-1
position: 364303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:360083-360244:-1:exon

position:360083:-1
position: 360083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360244:-1
position: 360244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:338468-338806:-1:exon

position:338806:-1
position: 338806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NINJ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: NINJ1
product: ninjurin 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021539544.2
SIO_010081: NINJ1
subclass of: SO_0000673
so part of: NINJ1
location: complement(join(356177..358253,360083..360244,364069..364303,371258..371581))
location: region:356177-371581:-1
so has part: feature:371258-371581:-1:exon
so has part: feature:364069-364303:-1:exon
so has part: feature:360083-360244:-1:exon
so has part: feature:356177-358253:-1:exon

position:356177:-1
position: 356177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371258-371581:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:364069-364303:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:360083-360244:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:356177-358253:-1:exon

position:358253:-1
position: 358253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NINJ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: NINJ1
product: ninjurin 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021539542.2
SIO_010081: NINJ1
subclass of: SO_0000673
so part of: NINJ1
location: complement(join(356177..359975,360083..360244,364069..364303,371258..371581))
location: region:356177-371581:-1
so has part: feature:371258-371581:-1:exon
so has part: feature:364069-364303:-1:exon
so has part: feature:360083-360244:-1:exon
so has part: feature:356177-359975:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:371258-371581:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:364069-364303:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:360083-360244:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:356177-359975:-1:exon

position:359975:-1
position: 359975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NINJ1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 299123
gene: NINJ1
product: ninjurin 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002466269.2
SIO_010081: NINJ1
so part of: NINJ1
location: complement(join(356177..358253,359925..359984,360083..360244,364069..364303,371258..371581))
location: region:356177-371581:-1
so has part: feature:371258-371581:-1:exon
so has part: feature:364069-364303:-1:exon
so has part: feature:360083-360244:-1:exon
so has part: feature:359925-359984:-1:exon
so has part: feature:356177-358253:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:371258-371581:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:364069-364303:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:360083-360244:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:359925-359984:-1:exon

position:359925:-1
position: 359925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359984:-1
position: 359984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:356177-358253:-1:exon

NINJ1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 299123
gene: NINJ1
product: ninjurin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002466268.2
SIO_010081: NINJ1
so part of: NINJ1
location: complement(join(356177..358253,359925..360244,364069..364303,371258..371581))
location: region:356177-371581:-1
so has part: feature:371258-371581:-1:exon
so has part: feature:364069-364303:-1:exon
so has part: feature:359925-360244:-1:exon
so has part: feature:356177-358253:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:371258-371581:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:364069-364303:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:359925-360244:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:356177-358253:-1:exon

NINJ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: NINJ1
product: ninjurin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_021539541.2
SIO_010081: NINJ1
subclass of: SO_0000673
so part of: NINJ1
location: complement(join(356177..360244,364069..364303,371258..371581))
location: region:356177-371581:-1
so has part: feature:371258-371581:-1:exon
so has part: feature:364069-364303:-1:exon
so has part: feature:356177-360244:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:371258-371581:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:364069-364303:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:356177-360244:-1:exon

NINJ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: NINJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ninjurin-1
translation: MDSGSETHELNGTAEGAESAAEEQHRRWQWFQRNRPININHYANKKSAAESMLDIALLMANASQLKAVMEQGPSFSFYIPLIILISLSLTLQVMVGVLLIFLVKYDLNNPAKHGKLNFLNNLATGLVFIIVVVNIFITAFGVQKPVAEPASRQ
SIO_010081: NINJ1
subclass of: SO_0000673
so part of: NINJ1
location: complement(join(360090..360244,364069..364303,371258..371329))
location: region:360090-371329:-1
so has part: feature:371258-371329:-1:exon
so has part: feature:364069-364303:-1:exon
so has part: feature:360090-360244:-1:exon

XP_021395216.1
type: Protein
SIO_000068: ncbiprotein

position:360090:-1
position: 360090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371329:-1
position: 371329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371258-371329:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:364069-364303:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:360090-360244:-1:exon

NINJ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: NINJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ninjurin-1
translation: MDSGSETHELNGTAEGAESAAEEQHRRWQWFQRNRPININHYANKKSAAESMLDIALLMANASQLKAVMEQGPSFSFYIPLIILISLSLTLQVMVGVLLIFLVKYDLNNPAKHGKLNFLNNLATGLVFIIVVVNIFITAFGVQKPVAEPASRQ
SIO_010081: NINJ1
subclass of: SO_0000673
so part of: NINJ1
location: complement(join(360090..360244,364069..364303,371258..371329))
location: region:360090-371329:-1
so has part: feature:371258-371329:-1:exon
so has part: feature:364069-364303:-1:exon
so has part: feature:360090-360244:-1:exon

XP_021395217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:371258-371329:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:364069-364303:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:360090-360244:-1:exon

NINJ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: NINJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ninjurin-1
translation: MDSGSETHELNGTAEGAESAAEEQHRRWQWFQRNRPININHYANKKSAAESMLDIALLMANASQLKAVMEQGPSFSFYIPLIILISLSLTLQVMVGVLLIFLVKYDLNNPAKHGKLNFLNNLATGLVFIIVVVNIFITAFGVQKPVAEPASRQ
SIO_010081: NINJ1
subclass of: SO_0000673
so part of: NINJ1
location: complement(join(360090..360244,364069..364303,371258..371329))
location: region:360090-371329:-1
so has part: feature:371258-371329:-1:exon
so has part: feature:364069-364303:-1:exon
so has part: feature:360090-360244:-1:exon

XP_021395218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:371258-371329:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:364069-364303:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:360090-360244:-1:exon

NINJ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: NINJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ninjurin-1
translation: MDSGSETHELNGTAEGAESAAEEQHRRWQWFQRNRPININHYANKKSAAESMLDIALLMANASQLKAVMEQGPSFSFYIPLIILISLSLTLQVMVGVLLIFLVKYDLNNPAKHGKLNFLNNLATGLVFIIVVVNIFITAFGVQKPVAEPASRQ
SIO_010081: NINJ1
subclass of: SO_0000673
so part of: NINJ1
location: complement(join(360090..360244,364069..364303,371258..371329))
location: region:360090-371329:-1
so has part: feature:371258-371329:-1:exon
so has part: feature:364069-364303:-1:exon
so has part: feature:360090-360244:-1:exon

XP_021395219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:371258-371329:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:364069-364303:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:360090-360244:-1:exon

LOC110475414
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110475414
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 372294..373666
location: region:372294-373666:1
so has part: feature:372294-373666:1:exon
subclass of: SO_0000011

110475414
type: Gene
SIO_000068: ncbigene

position:372294:1
position: 372294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373666:1
position: 373666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372294-373666:1:exon

LOC110475414
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110475414
product: uncharacterized LOC110475414
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002466266.2
SIO_010081: LOC110475414
subclass of: SO_0000673
so part of: LOC110475414
location: join(372294..372545,373436..373553,373643..373666)
location: region:372294-373666:1
so has part: feature:372294-372545:1:exon
so has part: feature:373436-373553:1:exon
so has part: feature:373643-373666:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:372294-372545:1:exon

position:372545:1
position: 372545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:373436-373553:1:exon

position:373436:1
position: 373436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373553:1
position: 373553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:373643-373666:1:exon

position:373643:1
position: 373643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WNK2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: WNK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 425067..523828
location: region:425067-523828:1
so has part: feature:425067-523828:1:exon
subclass of: SO_0000010

110475423
type: Gene
SIO_000068: ncbigene

position:425067:1
position: 425067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523828:1
position: 523828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425067-523828:1:exon

WNK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: WNK2
product: WNK lysine deficient protein kinase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021539545.2
SIO_010081: WNK2
subclass of: SO_0000673
so part of: WNK2
location: join(425067..425827,462855..463027,464002..464222,467337..467494,474501..474589,475381..475600,478038..478326,480403..480599,481175..481318,483520..483711,484742..485224,488171..488485,491250..491299,491935..492100,492180..492296,492449..492616,492825..492870,493046..493162,493586..493677,496162..496213,496649..496704,496777..497468,497971..498185,499672..499887,500778..500876,506347..506391,507872..508125,515037..517208)
location: region:425067-517208:1
so has part: feature:425067-425827:1:exon
so has part: feature:462855-463027:1:exon
so has part: feature:464002-464222:1:exon
so has part: feature:467337-467494:1:exon
so has part: feature:474501-474589:1:exon
so has part: feature:475381-475600:1:exon
so has part: feature:478038-478326:1:exon
so has part: feature:480403-480599:1:exon
so has part: feature:481175-481318:1:exon
so has part: feature:483520-483711:1:exon
so has part: feature:484742-485224:1:exon
so has part: feature:488171-488485:1:exon
so has part: feature:491250-491299:1:exon
so has part: feature:491935-492100:1:exon
so has part: feature:492180-492296:1:exon
so has part: feature:492449-492616:1:exon
so has part: feature:492825-492870:1:exon
so has part: feature:493046-493162:1:exon
so has part: feature:493586-493677:1:exon
so has part: feature:496162-496213:1:exon
so has part: feature:496649-496704:1:exon
so has part: feature:496777-497468:1:exon
so has part: feature:497971-498185:1:exon
so has part: feature:499672-499887:1:exon
so has part: feature:500778-500876:1:exon
so has part: feature:506347-506391:1:exon
so has part: feature:507872-508125:1:exon
so has part: feature:515037-517208:1:exon

position:517208:1
position: 517208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425067-425827:1:exon

position:425827:1
position: 425827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:462855-463027:1:exon

position:462855:1
position: 462855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463027:1
position: 463027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:464002-464222:1:exon

position:464002:1
position: 464002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464222:1
position: 464222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:467337-467494:1:exon

position:467337:1
position: 467337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467494:1
position: 467494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:474501-474589:1:exon

position:474501:1
position: 474501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474589:1
position: 474589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:475381-475600:1:exon

position:475381:1
position: 475381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475600:1
position: 475600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:478038-478326:1:exon

position:478038:1
position: 478038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478326:1
position: 478326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:480403-480599:1:exon

position:480403:1
position: 480403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480599:1
position: 480599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:481175-481318:1:exon

position:481175:1
position: 481175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481318:1
position: 481318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:483520-483711:1:exon

position:483520:1
position: 483520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483711:1
position: 483711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:484742-485224:1:exon

position:484742:1
position: 484742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485224:1
position: 485224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:488171-488485:1:exon

position:488171:1
position: 488171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488485:1
position: 488485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:491250-491299:1:exon

position:491250:1
position: 491250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491299:1
position: 491299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:491935-492100:1:exon

position:491935:1
position: 491935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492100:1
position: 492100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:492180-492296:1:exon

position:492180:1
position: 492180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492296:1
position: 492296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:492449-492616:1:exon

position:492449:1
position: 492449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492616:1
position: 492616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:492825-492870:1:exon

position:492825:1
position: 492825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492870:1
position: 492870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:493046-493162:1:exon

position:493046:1
position: 493046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493162:1
position: 493162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:493586-493677:1:exon

position:493586:1
position: 493586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493677:1
position: 493677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:496162-496213:1:exon

position:496162:1
position: 496162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496213:1
position: 496213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:496649-496704:1:exon

position:496649:1
position: 496649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496704:1
position: 496704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:496777-497468:1:exon

position:496777:1
position: 496777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497468:1
position: 497468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:497971-498185:1:exon

position:497971:1
position: 497971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498185:1
position: 498185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:499672-499887:1:exon

position:499672:1
position: 499672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499887:1
position: 499887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:500778-500876:1:exon

position:500778:1
position: 500778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500876:1
position: 500876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:506347-506391:1:exon

position:506347:1
position: 506347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506391:1
position: 506391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:507872-508125:1:exon

position:507872:1
position: 507872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508125:1
position: 508125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:515037-517208:1:exon

position:515037:1
position: 515037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WNK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: WNK2
product: WNK lysine deficient protein kinase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021539547.2
SIO_010081: WNK2
subclass of: SO_0000673
so part of: WNK2
location: join(425071..425827,462855..463027,464002..464222,467337..467494,474501..474589,475381..475600,478038..478326,480403..480599,481175..481318,483520..483711,484742..485224,488171..488485,491250..491299,491935..492100,492180..492296,492449..492616,492825..492870,493046..493162,493586..493677,496162..496213,496649..496704,496777..497468,497971..498185,499672..499887,500778..500876,506347..506391,507872..508125,522669..523828)
location: region:425071-523828:1
so has part: feature:425071-425827:1:exon
so has part: feature:462855-463027:1:exon
so has part: feature:464002-464222:1:exon
so has part: feature:467337-467494:1:exon
so has part: feature:474501-474589:1:exon
so has part: feature:475381-475600:1:exon
so has part: feature:478038-478326:1:exon
so has part: feature:480403-480599:1:exon
so has part: feature:481175-481318:1:exon
so has part: feature:483520-483711:1:exon
so has part: feature:484742-485224:1:exon
so has part: feature:488171-488485:1:exon
so has part: feature:491250-491299:1:exon
so has part: feature:491935-492100:1:exon
so has part: feature:492180-492296:1:exon
so has part: feature:492449-492616:1:exon
so has part: feature:492825-492870:1:exon
so has part: feature:493046-493162:1:exon
so has part: feature:493586-493677:1:exon
so has part: feature:496162-496213:1:exon
so has part: feature:496649-496704:1:exon
so has part: feature:496777-497468:1:exon
so has part: feature:497971-498185:1:exon
so has part: feature:499672-499887:1:exon
so has part: feature:500778-500876:1:exon
so has part: feature:506347-506391:1:exon
so has part: feature:507872-508125:1:exon
so has part: feature:522669-523828:1:exon

position:425071:1
position: 425071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425071-425827:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:462855-463027:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464002-464222:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:467337-467494:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474501-474589:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:475381-475600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478038-478326:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:480403-480599:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:481175-481318:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:483520-483711:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:484742-485224:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:488171-488485:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:491250-491299:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:491935-492100:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:492180-492296:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:492449-492616:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:492825-492870:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:493046-493162:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:493586-493677:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:496162-496213:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:496649-496704:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:496777-497468:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:497971-498185:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:499672-499887:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:500778-500876:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:506347-506391:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:507872-508125:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:522669-523828:1:exon

position:522669:1
position: 522669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WNK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: WNK2
product: WNK lysine deficient protein kinase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021539551.2
SIO_010081: WNK2
subclass of: SO_0000673
so part of: WNK2
location: join(425071..425827,462855..463027,464002..464222,467337..467494,474501..474589,475381..475600,478038..478326,480403..480599,481175..481318,483520..483711,484742..485224,488171..488485,491250..491299,491935..492100,492180..492296,492449..492616,492825..492870,493046..493162,493586..493677,496162..496213,496649..496704,496777..497468,497971..498185,499672..499887,500778..500876,506347..506391,507872..508070,522669..522763)
location: region:425071-522763:1
so has part: feature:425071-425827:1:exon
so has part: feature:462855-463027:1:exon
so has part: feature:464002-464222:1:exon
so has part: feature:467337-467494:1:exon
so has part: feature:474501-474589:1:exon
so has part: feature:475381-475600:1:exon
so has part: feature:478038-478326:1:exon
so has part: feature:480403-480599:1:exon
so has part: feature:481175-481318:1:exon
so has part: feature:483520-483711:1:exon
so has part: feature:484742-485224:1:exon
so has part: feature:488171-488485:1:exon
so has part: feature:491250-491299:1:exon
so has part: feature:491935-492100:1:exon
so has part: feature:492180-492296:1:exon
so has part: feature:492449-492616:1:exon
so has part: feature:492825-492870:1:exon
so has part: feature:493046-493162:1:exon
so has part: feature:493586-493677:1:exon
so has part: feature:496162-496213:1:exon
so has part: feature:496649-496704:1:exon
so has part: feature:496777-497468:1:exon
so has part: feature:497971-498185:1:exon
so has part: feature:499672-499887:1:exon
so has part: feature:500778-500876:1:exon
so has part: feature:506347-506391:1:exon
so has part: feature:507872-508070:1:exon
so has part: feature:522669-522763:1:exon

position:522763:1
position: 522763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425071-425827:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:462855-463027:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464002-464222:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:467337-467494:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474501-474589:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:475381-475600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478038-478326:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:480403-480599:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:481175-481318:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:483520-483711:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:484742-485224:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:488171-488485:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:491250-491299:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:491935-492100:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:492180-492296:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:492449-492616:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:492825-492870:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:493046-493162:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:493586-493677:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:496162-496213:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:496649-496704:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:496777-497468:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:497971-498185:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:499672-499887:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:500778-500876:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:506347-506391:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:507872-508070:1:exon

position:508070:1
position: 508070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:522669-522763:1:exon

WNK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: WNK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase WNK2 isoform X2
translation: MESGGDARAAPRRGSRGGGRGGVPAAAEPGAPPAAEAGVNMDGPGGSGSGAAADTDAPATPAASGARPPPRGPGSRDTKLVHQRFLRRSVVDSDQEEPAFDLPEAEHQRRIILLPKTRRIIAERAKTGQEAADREAECSREPRATPAAGSAAGAEEQKEPGKDAERREAQDAAKDQGKAKKEEPEEEADMKAVATSPDGRFLKFDIELGRGSFKTVYKGLDTETWVEVAWCELQDRKLTKVERQRFKEEAEMLKGLQHPNIVRFYDFWESCAKAKRCIVLVTELMTSGTLKTYLKRFKVMKPKVLRSWCRQILKGLLFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKSVIGTPEFMAPEMYEEHYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRKVTCGIKPASFEKVTDPEIKEIIGECICKNKEERYEIKDLLSHAFFAEDTGVRVELAEEDHGRKSSIALRLWVEDPKKLKGKPKDNGAIEFTFDLEKETPDDVAQEMIDSGFFHENDLKIVAKSIRDRVALILWRRERIWPRMQSEERRDSECLDKLKAPQAQQVQVTYLSHTGHHILSEPEEPEADQHPFQQNLPTSVTSVASDSTFDSGQGSTVYSDSQSSQQSVIYSSLPDTVPPAIQRVYSPPLSEGQPVPHSLPQLGHYQQPSAPVLPAVPATPAVVPQHYQEPAMPFPVVPSTVASLPMGQAPPPVLAGQQQQPMAQAASLQQVLSSQPVCPLPPAPHLLPPFPAQGSQVPASSTPLKPLQISTVPQLPPVAPSQIPPFPVIPAITPLAGLDSLPPNLSDIPPASVPPIPAPSQYFAPAVILPSLPMNPALPMAPNSPALPMQAVNLPHTTVASLVLPCQPIVPNMPTATIPLLAVAPPGVPPHGAVPPLPQPVFQPAFQPRLPSDAPSSQPVSQPQPPPPALQPSVIHPPEPAHQPVPGHAQFALEAGAQVPVLPVQASMVMSPPLQLQPELVPPCVAPDGLAQVHGSLATAAPPAPIEPGLPLQPSALLQLQPDLSQPLGQQLPAPCSAVTAGTETSQEEQAIQDKLQALSQSCESYMSPDVASGKEMNDSLEGATGSGKQEGKSSKKHKKSTRARSRQEKSNRPKLTILNVCNTGDKMVECQLETHNHKMVTFKFDLDGDAPEEIATYMVENEFILQSEKETFIEQMKDIIDKAEDMLSEDTEGERSSDQGTSPQQDADRLEISEEKRQSQMKTPVYQQNVLHTGKRWFIICPVVENPTTDAPEFSPPMPPSAQQTEGPDLEQSDDQPVSSAVTEAPGLGAGQQLPLHTGLNKPEVTGVTAHPSETRGPATSIASAPAAPAKDLLQVAPPSSGTAPQIETFQKSEEAERTTLPTHAESVMRQATADGAMSYFHRDGSPGSGSYEKQAEAQESGTPAKTIGRFSVISMQDELTLAAPQCLRFSAPPDVYLDELPSSPDMKAAVRRVQTASSVDVLCDQASSDSADEPFPQQLAAAAAAQLSPPSSSTATDLIKKAAAFLQRSAKGGSPGPESPNGQGAKIPTINITSFHSQSSYMSSDNDSEFEDADMKKELQNLREKHMKEIAELQTQQKNEIEALYIRLGKPLPPNLGFLHSAPPSSRRRRTSKNKLKAGKLLNPLVQQLRSGTSSTSNLSDSKGSPHKESSNSQPGFPEAAAVPPGTAPAFGKAVQTQQPCSVKASLSSDICSGLGPDTADTSTGSGQGWTVFHQTSERVTYKSSSKPRTRFLSGPVSLSIWSTLKRLCLGKDHSSRSSTNSLVTCPEPLPQSTLQVQANNSNNKKGTFTDDLHKLVDQWTSKTVGAAQTKPSLNQLKQNQKRQDMEPKANPMQMQNETCGILKMRPSVTDTWPPQLQCQVQGPAMAKEEEEEDGK
SIO_010081: WNK2
subclass of: SO_0000673
so part of: WNK2
location: join(425126..425827,462855..463027,464002..464222,467337..467494,474501..474589,475381..475600,478038..478326,480403..480599,481175..481318,483520..483711,484742..485224,488171..488485,491250..491299,491935..492100,492180..492296,492449..492616,492825..492870,493046..493162,493586..493677,496162..496213,496649..496704,496777..497468,497971..498185,499672..499887,500778..500876,506347..506391,507872..508125,522669..522776)
location: region:425126-522776:1
so has part: feature:425126-425827:1:exon
so has part: feature:462855-463027:1:exon
so has part: feature:464002-464222:1:exon
so has part: feature:467337-467494:1:exon
so has part: feature:474501-474589:1:exon
so has part: feature:475381-475600:1:exon
so has part: feature:478038-478326:1:exon
so has part: feature:480403-480599:1:exon
so has part: feature:481175-481318:1:exon
so has part: feature:483520-483711:1:exon
so has part: feature:484742-485224:1:exon
so has part: feature:488171-488485:1:exon
so has part: feature:491250-491299:1:exon
so has part: feature:491935-492100:1:exon
so has part: feature:492180-492296:1:exon
so has part: feature:492449-492616:1:exon
so has part: feature:492825-492870:1:exon
so has part: feature:493046-493162:1:exon
so has part: feature:493586-493677:1:exon
so has part: feature:496162-496213:1:exon
so has part: feature:496649-496704:1:exon
so has part: feature:496777-497468:1:exon
so has part: feature:497971-498185:1:exon
so has part: feature:499672-499887:1:exon
so has part: feature:500778-500876:1:exon
so has part: feature:506347-506391:1:exon
so has part: feature:507872-508125:1:exon
so has part: feature:522669-522776:1:exon

XP_021395222.1
type: Protein
SIO_000068: ncbiprotein

position:425126:1
position: 425126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522776:1
position: 522776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425126-425827:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:462855-463027:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464002-464222:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:467337-467494:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474501-474589:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:475381-475600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478038-478326:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:480403-480599:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:481175-481318:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:483520-483711:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:484742-485224:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:488171-488485:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:491250-491299:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:491935-492100:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:492180-492296:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:492449-492616:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:492825-492870:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:493046-493162:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:493586-493677:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:496162-496213:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:496649-496704:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:496777-497468:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:497971-498185:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:499672-499887:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:500778-500876:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:506347-506391:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:507872-508125:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:522669-522776:1:exon

WNK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: WNK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase WNK2 isoform X3
translation: MESGGDARAAPRRGSRGGGRGGVPAAAEPGAPPAAEAGVNMDGPGGSGSGAAADTDAPATPAASGARPPPRGPGSRDTKLVHQRFLRRSVVDSDQEEPAFDLPEAEHQRRIILLPKTRRIIAERAKTGQEAADREAECSREPRATPAAGSAAGAEEQKEPGKDAERREAQDAAKDQGKAKKEEPEEEADMKAVATSPDGRFLKFDIELGRGSFKTVYKGLDTETWVEVAWCELQDRKLTKVERQRFKEEAEMLKGLQHPNIVRFYDFWESCAKAKRCIVLVTELMTSGTLKTYLKRFKVMKPKVLRSWCRQILKGLLFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKSVIGTPEFMAPEMYEEHYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRKVTCGIKPASFEKVTDPEIKEIIGECICKNKEERYEIKDLLSHAFFAEDTGVRVELAEEDHGRKSSIALRLWVEDPKKLKGKPKDNGAIEFTFDLEKETPDDVAQEMIDSGFFHENDLKIVAKSIRDRVALILWRRERIWPRMQSEERRDSECLDKLKAPQAQQVQVTYLSHTGHHILSEPEEPEADQHPFQQNLPTSVTSVASDSTFDSGQGSTVYSDSQSSQQSVIYSSLPDTVPPAIQRVYSPPLSEGQPVPHSLPQLGHYQQPSAPVLPAVPATPAVVPQHYQEPAMPFPVVPSTVASLPMGQAPPPVLAGQQQQPMAQAASLQQVLSSQPVCPLPPAPHLLPPFPAQGSQVPASSTPLKPLQISTVPQLPPVAPSQIPPFPVIPAITPLAGLDSLPPNLSDIPPASVPPIPAPSQYFAPAVILPSLPMNPALPMAPNSPALPMQAVNLPHTTVASLVLPCQPIVPNMPTATIPLLAVAPPGVPPHGAVPPLPQPVFQPAFQPRLPSDAPSSQPVSQPQPPPPALQPSVIHPPEPAHQPVPGHAQFALEAGAQVPVLPVQASMVMSPPLQLQPELVPPCVAPDGLAQVHGSLATAAPPAPIEPGLPLQPSALLQLQPDLSQPLGQQLPAPCSAVTAGTETSQEEQAIQDKLQALSQSCESYMSPDVASGKEMNDSLEGATGSGKQEGKSSKKHKKSTRARSRQEKSNRPKLTILNVCNTGDKMVECQLETHNHKMVTFKFDLDGDAPEEIATYMVENEFILQSEKETFIEQMKDIIDKAEDMLSEDTEGERSSDQGTSPQQDADRLEISEEKRQSQMKTPVYQQNVLHTGKRWFIICPVVENPTTDAPEFSPPMPPSAQQTEGPDLEQSDDQPVSSAVTEAPGLGAGQQLPLHTGLNKPEVTGVTAHPSETRGPATSIASAPAAPAKDLLQVAPPSSGTAPQIETFQKSEEAERTTLPTHAESVMRQATADGAMSYFHRDGSPGSGSYEKQAEAQESGTPAKTIGRFSVISMQDELTLAAPQCLRFSAPPDVYLDELPSSPDMKAAVRRVQTASSVDVLCDQASSDSADEPFPQQLAAAAAAQLSPPSSSTATDLIKKAAAFLQRSAKGGSPGPESPNGQGAKIPTINITSFHSQSSYMSSDNDSEFEDADMKKELQNLREKHMKEIAELQTQQKNEIEALYIRLGKPLPPNLGFLHSAPPSSRRRRTSKNKLKAGKLLNPLVQQLRSGTSSTSNLSDSKGSPHKESSNSQPGFPEAAAVPPGTAPAFGKAVQTQQPCSVKASLSSDICSGLGPDTADTSTGSGQGWTVFHQTSERVTYKSSSKPRTRFLSGPVSLSIWSTLKRLCLGKDHSSRSSTNSLVTCPEPLPQSTLQVQANNSNNKKGTFTDDLHKLVDQWTSKTVGAAQTKPSLNQLKQNQKRF
SIO_010081: WNK2
subclass of: SO_0000673
so part of: WNK2
location: join(425126..425827,462855..463027,464002..464222,467337..467494,474501..474589,475381..475600,478038..478326,480403..480599,481175..481318,483520..483711,484742..485224,488171..488485,491250..491299,491935..492100,492180..492296,492449..492616,492825..492870,493046..493162,493586..493677,496162..496213,496649..496704,496777..497468,497971..498185,499672..499887,500778..500876,506347..506391,507872..508070,522669..522675)
location: region:425126-522675:1
so has part: feature:425126-425827:1:exon
so has part: feature:462855-463027:1:exon
so has part: feature:464002-464222:1:exon
so has part: feature:467337-467494:1:exon
so has part: feature:474501-474589:1:exon
so has part: feature:475381-475600:1:exon
so has part: feature:478038-478326:1:exon
so has part: feature:480403-480599:1:exon
so has part: feature:481175-481318:1:exon
so has part: feature:483520-483711:1:exon
so has part: feature:484742-485224:1:exon
so has part: feature:488171-488485:1:exon
so has part: feature:491250-491299:1:exon
so has part: feature:491935-492100:1:exon
so has part: feature:492180-492296:1:exon
so has part: feature:492449-492616:1:exon
so has part: feature:492825-492870:1:exon
so has part: feature:493046-493162:1:exon
so has part: feature:493586-493677:1:exon
so has part: feature:496162-496213:1:exon
so has part: feature:496649-496704:1:exon
so has part: feature:496777-497468:1:exon
so has part: feature:497971-498185:1:exon
so has part: feature:499672-499887:1:exon
so has part: feature:500778-500876:1:exon
so has part: feature:506347-506391:1:exon
so has part: feature:507872-508070:1:exon
so has part: feature:522669-522675:1:exon

XP_021395226.1
type: Protein
SIO_000068: ncbiprotein

position:522675:1
position: 522675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425126-425827:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:462855-463027:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464002-464222:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:467337-467494:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474501-474589:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:475381-475600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478038-478326:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:480403-480599:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:481175-481318:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:483520-483711:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:484742-485224:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:488171-488485:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:491250-491299:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:491935-492100:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:492180-492296:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:492449-492616:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:492825-492870:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:493046-493162:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:493586-493677:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:496162-496213:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:496649-496704:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:496777-497468:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:497971-498185:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:499672-499887:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:500778-500876:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:506347-506391:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:507872-508070:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:522669-522675:1:exon

WNK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: WNK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase WNK2 isoform X1
translation: MESGGDARAAPRRGSRGGGRGGVPAAAEPGAPPAAEAGVNMDGPGGSGSGAAADTDAPATPAASGARPPPRGPGSRDTKLVHQRFLRRSVVDSDQEEPAFDLPEAEHQRRIILLPKTRRIIAERAKTGQEAADREAECSREPRATPAAGSAAGAEEQKEPGKDAERREAQDAAKDQGKAKKEEPEEEADMKAVATSPDGRFLKFDIELGRGSFKTVYKGLDTETWVEVAWCELQDRKLTKVERQRFKEEAEMLKGLQHPNIVRFYDFWESCAKAKRCIVLVTELMTSGTLKTYLKRFKVMKPKVLRSWCRQILKGLLFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKSVIGTPEFMAPEMYEEHYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRKVTCGIKPASFEKVTDPEIKEIIGECICKNKEERYEIKDLLSHAFFAEDTGVRVELAEEDHGRKSSIALRLWVEDPKKLKGKPKDNGAIEFTFDLEKETPDDVAQEMIDSGFFHENDLKIVAKSIRDRVALILWRRERIWPRMQSEERRDSECLDKLKAPQAQQVQVTYLSHTGHHILSEPEEPEADQHPFQQNLPTSVTSVASDSTFDSGQGSTVYSDSQSSQQSVIYSSLPDTVPPAIQRVYSPPLSEGQPVPHSLPQLGHYQQPSAPVLPAVPATPAVVPQHYQEPAMPFPVVPSTVASLPMGQAPPPVLAGQQQQPMAQAASLQQVLSSQPVCPLPPAPHLLPPFPAQGSQVPASSTPLKPLQISTVPQLPPVAPSQIPPFPVIPAITPLAGLDSLPPNLSDIPPASVPPIPAPSQYFAPAVILPSLPMNPALPMAPNSPALPMQAVNLPHTTVASLVLPCQPIVPNMPTATIPLLAVAPPGVPPHGAVPPLPQPVFQPAFQPRLPSDAPSSQPVSQPQPPPPALQPSVIHPPEPAHQPVPGHAQFALEAGAQVPVLPVQASMVMSPPLQLQPELVPPCVAPDGLAQVHGSLATAAPPAPIEPGLPLQPSALLQLQPDLSQPLGQQLPAPCSAVTAGTETSQEEQAIQDKLQALSQSCESYMSPDVASGKEMNDSLEGATGSGKQEGKSSKKHKKSTRARSRQEKSNRPKLTILNVCNTGDKMVECQLETHNHKMVTFKFDLDGDAPEEIATYMVENEFILQSEKETFIEQMKDIIDKAEDMLSEDTEGERSSDQGTSPQQDADRLEISEEKRQSQMKTPVYQQNVLHTGKRWFIICPVVENPTTDAPEFSPPMPPSAQQTEGPDLEQSDDQPVSSAVTEAPGLGAGQQLPLHTGLNKPEVTGVTAHPSETRGPATSIASAPAAPAKDLLQVAPPSSGTAPQIETFQKSEEAERTTLPTHAESVMRQATADGAMSYFHRDGSPGSGSYEKQAEAQESGTPAKTIGRFSVISMQDELTLAAPQCLRFSAPPDVYLDELPSSPDMKAAVRRVQTASSVDVLCDQASSDSADEPFPQQLAAAAAAQLSPPSSSTATDLIKKAAAFLQRSAKGGSPGPESPNGQGAKIPTINITSFHSQSSYMSSDNDSEFEDADMKKELQNLREKHMKEIAELQTQQKNEIEALYIRLGKPLPPNLGFLHSAPPSSRRRRTSKNKLKAGKLLNPLVQQLRSGTSSTSNLSDSKGSPHKESSNSQPGFPEAAAVPPGTAPAFGKAVQTQQPCSVKASLSSDICSGLGPDTADTSTGSGQGWTVFHQTSERVTYKSSSKPRTRFLSGPVSLSIWSTLKRLCLGKDHSSRSSTNSLVTCPEPLPQSTLQVQANNSNNKKGTFTDDLHKLVDQWTSKTVGAAQTKPSLNQLKQNQKRQDMEPKANPMQMQNETCGVSSVRTGLGSKCPVPVACPVPTGLAPGAVPSLPVPGPALAGAVTPYVMPLCPYGAVFPSPVYGVPWPGPVAQPGLVRGPGAVHVPPLGRACLPMYPVPLQRPARPPGPRLRMT
SIO_010081: WNK2
subclass of: SO_0000673
so part of: WNK2
location: join(425126..425827,462855..463027,464002..464222,467337..467494,474501..474589,475381..475600,478038..478326,480403..480599,481175..481318,483520..483711,484742..485224,488171..488485,491250..491299,491935..492100,492180..492296,492449..492616,492825..492870,493046..493162,493586..493677,496162..496213,496649..496704,496777..497468,497971..498185,499672..499887,500778..500876,506347..506391,507872..508125,515037..515378)
location: region:425126-515378:1
so has part: feature:425126-425827:1:exon
so has part: feature:462855-463027:1:exon
so has part: feature:464002-464222:1:exon
so has part: feature:467337-467494:1:exon
so has part: feature:474501-474589:1:exon
so has part: feature:475381-475600:1:exon
so has part: feature:478038-478326:1:exon
so has part: feature:480403-480599:1:exon
so has part: feature:481175-481318:1:exon
so has part: feature:483520-483711:1:exon
so has part: feature:484742-485224:1:exon
so has part: feature:488171-488485:1:exon
so has part: feature:491250-491299:1:exon
so has part: feature:491935-492100:1:exon
so has part: feature:492180-492296:1:exon
so has part: feature:492449-492616:1:exon
so has part: feature:492825-492870:1:exon
so has part: feature:493046-493162:1:exon
so has part: feature:493586-493677:1:exon
so has part: feature:496162-496213:1:exon
so has part: feature:496649-496704:1:exon
so has part: feature:496777-497468:1:exon
so has part: feature:497971-498185:1:exon
so has part: feature:499672-499887:1:exon
so has part: feature:500778-500876:1:exon
so has part: feature:506347-506391:1:exon
so has part: feature:507872-508125:1:exon
so has part: feature:515037-515378:1:exon

XP_021395220.1
type: Protein
SIO_000068: ncbiprotein

position:515378:1
position: 515378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425126-425827:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:462855-463027:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464002-464222:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:467337-467494:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474501-474589:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:475381-475600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478038-478326:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:480403-480599:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:481175-481318:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:483520-483711:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:484742-485224:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:488171-488485:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:491250-491299:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:491935-492100:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:492180-492296:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:492449-492616:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:492825-492870:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:493046-493162:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:493586-493677:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:496162-496213:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:496649-496704:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:496777-497468:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:497971-498185:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:499672-499887:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:500778-500876:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:506347-506391:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:507872-508125:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:515037-515378:1:exon

LOC110475425
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110475425
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(540594..561210)
location: region:540594-561210:-1
so has part: feature:540594-561210:-1:exon
subclass of: SO_0000011

110475425
type: Gene
SIO_000068: ncbigene

position:540594:-1
position: 540594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:561210:-1
position: 561210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540594-561210:-1:exon

LOC110475425
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110475425
product: uncharacterized LOC110475425, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002466271.2
SIO_010081: LOC110475425
subclass of: SO_0000673
so part of: LOC110475425
location: complement(join(540594..543049,544090..544381,546980..547033,550614..550700,553389..553529,561109..561210))
location: region:540594-561210:-1
so has part: feature:561109-561210:-1:exon
so has part: feature:553389-553529:-1:exon
so has part: feature:550614-550700:-1:exon
so has part: feature:546980-547033:-1:exon
so has part: feature:544090-544381:-1:exon
so has part: feature:540594-543049:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:561109-561210:-1:exon

position:561109:-1
position: 561109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:553389-553529:-1:exon

position:553389:-1
position: 553389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553529:-1
position: 553529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:550614-550700:-1:exon

position:550614:-1
position: 550614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550700:-1
position: 550700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:546980-547033:-1:exon

position:546980:-1
position: 546980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547033:-1
position: 547033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:544090-544381:-1:exon

position:544090:-1
position: 544090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544381:-1
position: 544381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:540594-543049:-1:exon

position:543049:-1
position: 543049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110475425
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110475425
product: uncharacterized LOC110475425, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002466270.2
SIO_010081: LOC110475425
subclass of: SO_0000673
so part of: LOC110475425
location: complement(join(540594..543049,544090..544381,546980..547033,548058..548274,550614..550700,553389..553529,561109..561210))
location: region:540594-561210:-1
so has part: feature:561109-561210:-1:exon
so has part: feature:553389-553529:-1:exon
so has part: feature:550614-550700:-1:exon
so has part: feature:548058-548274:-1:exon
so has part: feature:546980-547033:-1:exon
so has part: feature:544090-544381:-1:exon
so has part: feature:540594-543049:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:561109-561210:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:553389-553529:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:550614-550700:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:548058-548274:-1:exon

position:548058:-1
position: 548058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548274:-1
position: 548274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:546980-547033:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:544090-544381:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:540594-543049:-1:exon

FAM120A
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: FAM120A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 560805..608729
location: region:560805-608729:1
so has part: feature:560805-608729:1:exon
subclass of: SO_0000010

110475424
type: Gene
SIO_000068: ncbigene

position:560805:1
position: 560805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608729:1
position: 608729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:560805-608729:1:exon

FAM120A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: FAM120A
product: family with sequence similarity 120A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 47 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021539553.1
SIO_010081: FAM120A
subclass of: SO_0000673
so part of: FAM120A
location: join(560805..561583,566972..567218,571917..571999,579517..579645,580099..580195,581282..581379,581672..581955,582632..582719,586024..586248,588593..588767,594405..594654,595360..595474,596998..597207,598047..598230,599109..599246,600671..600812,604149..604245,606721..608729)
location: region:560805-608729:1
so has part: feature:560805-561583:1:exon
so has part: feature:566972-567218:1:exon
so has part: feature:571917-571999:1:exon
so has part: feature:579517-579645:1:exon
so has part: feature:580099-580195:1:exon
so has part: feature:581282-581379:1:exon
so has part: feature:581672-581955:1:exon
so has part: feature:582632-582719:1:exon
so has part: feature:586024-586248:1:exon
so has part: feature:588593-588767:1:exon
so has part: feature:594405-594654:1:exon
so has part: feature:595360-595474:1:exon
so has part: feature:596998-597207:1:exon
so has part: feature:598047-598230:1:exon
so has part: feature:599109-599246:1:exon
so has part: feature:600671-600812:1:exon
so has part: feature:604149-604245:1:exon
so has part: feature:606721-608729:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:560805-561583:1:exon

position:561583:1
position: 561583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:566972-567218:1:exon

position:566972:1
position: 566972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567218:1
position: 567218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:571917-571999:1:exon

position:571917:1
position: 571917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571999:1
position: 571999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:579517-579645:1:exon

position:579517:1
position: 579517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579645:1
position: 579645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:580099-580195:1:exon

position:580099:1
position: 580099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:580195:1
position: 580195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:581282-581379:1:exon

position:581282:1
position: 581282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:581379:1
position: 581379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:581672-581955:1:exon

position:581672:1
position: 581672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:581955:1
position: 581955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:582632-582719:1:exon

position:582632:1
position: 582632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:582719:1
position: 582719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:586024-586248:1:exon

position:586024:1
position: 586024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586248:1
position: 586248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:588593-588767:1:exon

position:588593:1
position: 588593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:588767:1
position: 588767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:594405-594654:1:exon

position:594405:1
position: 594405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594654:1
position: 594654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:595360-595474:1:exon

position:595360:1
position: 595360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595474:1
position: 595474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:596998-597207:1:exon

position:596998:1
position: 596998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:597207:1
position: 597207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:598047-598230:1:exon

position:598047:1
position: 598047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598230:1
position: 598230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:599109-599246:1:exon

position:599109:1
position: 599109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599246:1
position: 599246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:600671-600812:1:exon

position:600671:1
position: 600671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600812:1
position: 600812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:604149-604245:1:exon

position:604149:1
position: 604149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604245:1
position: 604245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:606721-608729:1:exon

position:606721:1
position: 606721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FAM120A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: FAM120A
product: family with sequence similarity 120A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 48 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021539552.1
SIO_010081: FAM120A
subclass of: SO_0000673
so part of: FAM120A
location: join(560806..561583,566972..567218,571917..571999,579517..579645,580099..580195,581279..581379,581672..581955,582632..582719,586024..586248,588593..588767,594405..594654,595360..595474,596998..597207,598047..598230,599109..599246,600671..600812,604149..604245,606721..608729)
location: region:560806-608729:1
so has part: feature:560806-561583:1:exon
so has part: feature:566972-567218:1:exon
so has part: feature:571917-571999:1:exon
so has part: feature:579517-579645:1:exon
so has part: feature:580099-580195:1:exon
so has part: feature:581279-581379:1:exon
so has part: feature:581672-581955:1:exon
so has part: feature:582632-582719:1:exon
so has part: feature:586024-586248:1:exon
so has part: feature:588593-588767:1:exon
so has part: feature:594405-594654:1:exon
so has part: feature:595360-595474:1:exon
so has part: feature:596998-597207:1:exon
so has part: feature:598047-598230:1:exon
so has part: feature:599109-599246:1:exon
so has part: feature:600671-600812:1:exon
so has part: feature:604149-604245:1:exon
so has part: feature:606721-608729:1:exon

position:560806:1
position: 560806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:560806-561583:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:566972-567218:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:571917-571999:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:579517-579645:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:580099-580195:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:581279-581379:1:exon

position:581279:1
position: 581279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:581672-581955:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:582632-582719:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:586024-586248:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:588593-588767:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:594405-594654:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:595360-595474:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:596998-597207:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:598047-598230:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:599109-599246:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:600671-600812:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:604149-604245:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:606721-608729:1:exon

FAM120A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: FAM120A
product: family with sequence similarity 120A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 47 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_021539555.1
SIO_010081: FAM120A
subclass of: SO_0000673
so part of: FAM120A
location: join(560806..561583,566972..567218,571917..571999,579517..579645,580099..580195,581279..581379,581672..581955,582632..582719,586024..586248,588593..588767,594405..594654,595360..595474,596998..597207,598047..598230,600671..600812,604149..604245,606721..608729)
location: region:560806-608729:1
so has part: feature:560806-561583:1:exon
so has part: feature:566972-567218:1:exon
so has part: feature:571917-571999:1:exon
so has part: feature:579517-579645:1:exon
so has part: feature:580099-580195:1:exon
so has part: feature:581279-581379:1:exon
so has part: feature:581672-581955:1:exon
so has part: feature:582632-582719:1:exon
so has part: feature:586024-586248:1:exon
so has part: feature:588593-588767:1:exon
so has part: feature:594405-594654:1:exon
so has part: feature:595360-595474:1:exon
so has part: feature:596998-597207:1:exon
so has part: feature:598047-598230:1:exon
so has part: feature:600671-600812:1:exon
so has part: feature:604149-604245:1:exon
so has part: feature:606721-608729:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:560806-561583:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:566972-567218:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:571917-571999:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:579517-579645:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:580099-580195:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:581279-581379:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:581672-581955:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:582632-582719:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:586024-586248:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:588593-588767:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:594405-594654:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:595360-595474:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:596998-597207:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:598047-598230:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:600671-600812:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:604149-604245:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:606721-608729:1:exon

FAM120A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: FAM120A
product: family with sequence similarity 120A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 46 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021539554.2
SIO_010081: FAM120A
subclass of: SO_0000673
so part of: FAM120A
location: join(560806..561514,566972..567218,571917..571999,579517..579645,580099..580195,581279..581379,581672..581955,582632..582719,586024..586248,588593..588767,594405..594654,595360..595474,596998..597207,598047..598230,599109..599246,600671..600812,604149..604245,606721..608729)
location: region:560806-608729:1
so has part: feature:560806-561514:1:exon
so has part: feature:566972-567218:1:exon
so has part: feature:571917-571999:1:exon
so has part: feature:579517-579645:1:exon
so has part: feature:580099-580195:1:exon
so has part: feature:581279-581379:1:exon
so has part: feature:581672-581955:1:exon
so has part: feature:582632-582719:1:exon
so has part: feature:586024-586248:1:exon
so has part: feature:588593-588767:1:exon
so has part: feature:594405-594654:1:exon
so has part: feature:595360-595474:1:exon
so has part: feature:596998-597207:1:exon
so has part: feature:598047-598230:1:exon
so has part: feature:599109-599246:1:exon
so has part: feature:600671-600812:1:exon
so has part: feature:604149-604245:1:exon
so has part: feature:606721-608729:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:560806-561514:1:exon

position:561514:1
position: 561514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:566972-567218:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:571917-571999:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:579517-579645:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:580099-580195:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:581279-581379:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:581672-581955:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:582632-582719:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:586024-586248:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:588593-588767:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:594405-594654:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:595360-595474:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:596998-597207:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:598047-598230:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:599109-599246:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:600671-600812:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:604149-604245:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:606721-608729:1:exon

FAM120A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: FAM120A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: constitutive coactivator of PPAR-gamma-like protein 1 isoform X1
translation: MGVQGFQDYIEKHCPSAVVPVELQKLARGSLVGGGRQRPPQTPLRLLIDADNCLHRLYGGFYTDWVSGGQWNHMLGYLAALAKACFNGNIELFVFFNGALEKARLHEWVKRQGNERQTAQQIVSHVQNKGTPPPKVWFLPPVCMAHCIRLALIRFHIKVAQSIEDHHQEVIAFCREKGFHGLVAYDSDYALCNIPYYFSAHALKLSRNGKSLTTSQYLMHEVAKQLDLNPNRFPIFAALLGNHILPDEDLASFHWSLLGPEHPLASLKVRAHQLVLPPCDVVIKAVADYVRNIQDTADLDAIAKDVFQHSQSRTDDKVTRFKRAVAYYSATNKPMPFHPPHYLAARPNQFGMPGIVPPYVPSQMLNIPQTSLQAKPVAQQMSSQGGAQGQGPYPYSLSEPAITLETGGKSLSEQNNYSNIPHEGKHTPLYERSSPINPAQSGSPNHVDSTYFPASSTSSSSDNDEGNGGAVNHVSGNKIGWEKPGTQSEGQTCGELGDQTKAEGSSSASSGSQAADVKGNQTSNPQIPCLLSMPTRNHMDITTPPLPPVAPEVLRVAEHRHKKGLMYPYIFHVLTKGEIKIAVSIEDEANKDLPPAALLYRPVRQYVYGVLFSLAESRKKTERLAFRKNRLPPEFSPVIIKEWAAYKGKSPQTPELVEALAFREWTCPNLKKLWLGKAVEDKNRRMRAFLACMRSDTPAMLNPTNVPTHLMVLCCVLRYMVQWPGVRILRRQELDAFLAQALSPKLYEPDQLQELKIENLDPRGIQLSALFMSGVDMALFANDACGQPIPWEHCCPWMYFDGKLFQTKLIKASREKVPLIDLCDGQAEQAAKVEKMRQSILEGLNFSRQNHPLPFPPPPAMPFYPASMYPRHFGPVPPPQGRGRGFAGVYGFGGPYGETVATGTYRAFRVAAAAGHSGAFSGNDSNRTSKFQGGVQPIPSQGGKLEIAGTVVGHWAGSRRGRGGRGPFPLQVVSVGGPARGRPRGVISTPVIRTFGRGGRYYGRGYKSQGAIQGKPPYAASAEEVAKELKSKSEESKSSLVSSDGSLAENGVVTEEKPASQMNGNTGDIRASNQSESALSNDSKMCNTNPHLNALNADSVCHKDDALEATVLKKEE
SIO_010081: FAM120A
subclass of: SO_0000673
so part of: FAM120A
location: join(561110..561583,566972..567218,571917..571999,579517..579645,580099..580195,581279..581379,581672..581955,582632..582719,586024..586248,588593..588767,594405..594654,595360..595474,596998..597207,598047..598230,599109..599246,600671..600812,604149..604245,606721..607032)
location: region:561110-607032:1
so has part: feature:561110-561583:1:exon
so has part: feature:566972-567218:1:exon
so has part: feature:571917-571999:1:exon
so has part: feature:579517-579645:1:exon
so has part: feature:580099-580195:1:exon
so has part: feature:581279-581379:1:exon
so has part: feature:581672-581955:1:exon
so has part: feature:582632-582719:1:exon
so has part: feature:586024-586248:1:exon
so has part: feature:588593-588767:1:exon
so has part: feature:594405-594654:1:exon
so has part: feature:595360-595474:1:exon
so has part: feature:596998-597207:1:exon
so has part: feature:598047-598230:1:exon
so has part: feature:599109-599246:1:exon
so has part: feature:600671-600812:1:exon
so has part: feature:604149-604245:1:exon
so has part: feature:606721-607032:1:exon

XP_021395227.1
type: Protein
SIO_000068: ncbiprotein

position:561110:1
position: 561110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607032:1
position: 607032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:561110-561583:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:566972-567218:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:571917-571999:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:579517-579645:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:580099-580195:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:581279-581379:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:581672-581955:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:582632-582719:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:586024-586248:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:588593-588767:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:594405-594654:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:595360-595474:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:596998-597207:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:598047-598230:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:599109-599246:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:600671-600812:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:604149-604245:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:606721-607032:1:exon

FAM120A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: FAM120A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: constitutive coactivator of PPAR-gamma-like protein 1 isoform X4
translation: MGVQGFQDYIEKHCPSAVVPVELQKLARGSLVGGGRQRPPQTPLRLLIDADNCLHRLYGGFYTDWVSGGQWNHMLGYLAALAKACFNGNIELFVFFNGALEKARLHEWVKRQGNERQTAQQIVSHVQNKGTPPPKVWFLPPVCMAHCIRLALIRFHIKVAQSIEDHHQEVIAFCREKGFHGLVAYDSDYALCNIPYYFSAHALKLSRNGKSLTTSQYLMHEVAKQLDLNPNRFPIFAALLGNHILPDEDLASFHWSLLGPEHPLASLKVRAHQLVLPPCDVVIKAVADYVRNIQDTADLDAIAKDVFQHSQSRTDDKVTRFKRAVAYYSATNKPMPFHPPHYLAARPNQFGMPGIVPPYVPSQMLNIPQTSLQAKPVAQQMSSQGGAQGQGPYPYSLSEPAITLETGGKSLSEQNNYSNIPHEGKHTPLYERSSPINPAQSGSPNHVDSTYFPASSTSSSSDNDEGNGGAVNHVSGNKIGWEKPGTQSEGQTCGELGDQTKAEGSSSASSGSQAADVKGNQTSNPQIPCLLSMPTRNHMDITTPPLPPVAPEVLRVAEHRHKKGLMYPYIFHVLTKGEIKIAVSIEDEANKDLPPAALLYRPVRQYVYGVLFSLAESRKKTERLAFRKNRLPPEFSPVIIKEWAAYKGKSPQTPELVEALAFREWTCPNLKKLWLGKAVEDKNRRMRAFLACMRSDTPAMLNPTNVPTHLMVLCCVLRYMVQWPGVRILRRQELDAFLAQALSPKLYEPDQLQELKIENLDPRGIQLSALFMSGVDMALFANDACGQPIPWEHCCPWMYFDGKLFQTKLIKASREKVPLIDLCDGQAEQAAKVEKMRQSILEGLNFSRQNHPLPFPPPPAMPFYPASMYPRHFGPVPPPQGRGRGFAGVQPIPSQGGKLEIAGTVVGHWAGSRRGRGGRGPFPLQVVSVGGPARGRPRGVISTPVIRTFGRGGRYYGRGYKSQGAIQGKPPYAASAEEVAKELKSKSEESKSSLVSSDGSLAENGVVTEEKPASQMNGNTGDIRASNQSESALSNDSKMCNTNPHLNALNADSVCHKDDALEATVLKKEE
SIO_010081: FAM120A
subclass of: SO_0000673
so part of: FAM120A
location: join(561110..561583,566972..567218,571917..571999,579517..579645,580099..580195,581279..581379,581672..581955,582632..582719,586024..586248,588593..588767,594405..594654,595360..595474,596998..597207,598047..598230,600671..600812,604149..604245,606721..607032)
location: region:561110-607032:1
so has part: feature:561110-561583:1:exon
so has part: feature:566972-567218:1:exon
so has part: feature:571917-571999:1:exon
so has part: feature:579517-579645:1:exon
so has part: feature:580099-580195:1:exon
so has part: feature:581279-581379:1:exon
so has part: feature:581672-581955:1:exon
so has part: feature:582632-582719:1:exon
so has part: feature:586024-586248:1:exon
so has part: feature:588593-588767:1:exon
so has part: feature:594405-594654:1:exon
so has part: feature:595360-595474:1:exon
so has part: feature:596998-597207:1:exon
so has part: feature:598047-598230:1:exon
so has part: feature:600671-600812:1:exon
so has part: feature:604149-604245:1:exon
so has part: feature:606721-607032:1:exon

XP_021395230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:561110-561583:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:566972-567218:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:571917-571999:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:579517-579645:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:580099-580195:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:581279-581379:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:581672-581955:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:582632-582719:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:586024-586248:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:588593-588767:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:594405-594654:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:595360-595474:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:596998-597207:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:598047-598230:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:600671-600812:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:604149-604245:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:606721-607032:1:exon

FAM120A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: FAM120A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: constitutive coactivator of PPAR-gamma-like protein 1 isoform X2
translation: MGVQGFQDYIEKHCPSAVVPVELQKLARGSLVGGGRQRPPQTPLRLLIDADNCLHRLYGGFYTDWVSGGQWNHMLGYLAALAKACFNGNIELFVFFNGALEKARLHEWVKRQGNERQTAQQIVSHVQNKGTPPPKVWFLPPVCMAHCIRLALIRFHIKVAQSIEDHHQEVIAFCREKGFHGLVAYDSDYALCNIPYYFSAHALKLSRNGKSLTTSQYLMHEVAKQLDLNPNRFPIFAALLGNHILPDEDLASFHWSLLGPEHPLASLKVRAHQLVLPPCDVVIKAVADYVRNIQDTADLDAIAKDVFQHSQSRTDDKVTRFKRAVAYYSATNKPMPFHPPHYLARPNQFGMPGIVPPYVPSQMLNIPQTSLQAKPVAQQMSSQGGAQGQGPYPYSLSEPAITLETGGKSLSEQNNYSNIPHEGKHTPLYERSSPINPAQSGSPNHVDSTYFPASSTSSSSDNDEGNGGAVNHVSGNKIGWEKPGTQSEGQTCGELGDQTKAEGSSSASSGSQAADVKGNQTSNPQIPCLLSMPTRNHMDITTPPLPPVAPEVLRVAEHRHKKGLMYPYIFHVLTKGEIKIAVSIEDEANKDLPPAALLYRPVRQYVYGVLFSLAESRKKTERLAFRKNRLPPEFSPVIIKEWAAYKGKSPQTPELVEALAFREWTCPNLKKLWLGKAVEDKNRRMRAFLACMRSDTPAMLNPTNVPTHLMVLCCVLRYMVQWPGVRILRRQELDAFLAQALSPKLYEPDQLQELKIENLDPRGIQLSALFMSGVDMALFANDACGQPIPWEHCCPWMYFDGKLFQTKLIKASREKVPLIDLCDGQAEQAAKVEKMRQSILEGLNFSRQNHPLPFPPPPAMPFYPASMYPRHFGPVPPPQGRGRGFAGVYGFGGPYGETVATGTYRAFRVAAAAGHSGAFSGNDSNRTSKFQGGVQPIPSQGGKLEIAGTVVGHWAGSRRGRGGRGPFPLQVVSVGGPARGRPRGVISTPVIRTFGRGGRYYGRGYKSQGAIQGKPPYAASAEEVAKELKSKSEESKSSLVSSDGSLAENGVVTEEKPASQMNGNTGDIRASNQSESALSNDSKMCNTNPHLNALNADSVCHKDDALEATVLKKEE
SIO_010081: FAM120A
subclass of: SO_0000673
so part of: FAM120A
location: join(561110..561583,566972..567218,571917..571999,579517..579645,580099..580195,581282..581379,581672..581955,582632..582719,586024..586248,588593..588767,594405..594654,595360..595474,596998..597207,598047..598230,599109..599246,600671..600812,604149..604245,606721..607032)
location: region:561110-607032:1
so has part: feature:561110-561583:1:exon
so has part: feature:566972-567218:1:exon
so has part: feature:571917-571999:1:exon
so has part: feature:579517-579645:1:exon
so has part: feature:580099-580195:1:exon
so has part: feature:581282-581379:1:exon
so has part: feature:581672-581955:1:exon
so has part: feature:582632-582719:1:exon
so has part: feature:586024-586248:1:exon
so has part: feature:588593-588767:1:exon
so has part: feature:594405-594654:1:exon
so has part: feature:595360-595474:1:exon
so has part: feature:596998-597207:1:exon
so has part: feature:598047-598230:1:exon
so has part: feature:599109-599246:1:exon
so has part: feature:600671-600812:1:exon
so has part: feature:604149-604245:1:exon
so has part: feature:606721-607032:1:exon

XP_021395228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:561110-561583:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:566972-567218:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:571917-571999:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:579517-579645:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:580099-580195:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:581282-581379:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:581672-581955:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:582632-582719:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:586024-586248:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:588593-588767:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:594405-594654:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:595360-595474:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:596998-597207:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:598047-598230:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:599109-599246:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:600671-600812:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:604149-604245:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:606721-607032:1:exon

FAM120A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: FAM120A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: constitutive coactivator of PPAR-gamma-like protein 1 isoform X3
translation: MGVQGFQDYIEKHCPSAVVPVELQKLARGSLVGGGRQRPPQTPLRLLIDADNCLHRLYGGFYTDWVSGGQWNHMLGYLAALAKACFNGNIELFVFFNGALEKARLHEWVKRQGNERQTAQQIVSHVQNKGTPPPKVAQSIEDHHQEVIAFCREKGFHGLVAYDSDYALCNIPYYFSAHALKLSRNGKSLTTSQYLMHEVAKQLDLNPNRFPIFAALLGNHILPDEDLASFHWSLLGPEHPLASLKVRAHQLVLPPCDVVIKAVADYVRNIQDTADLDAIAKDVFQHSQSRTDDKVTRFKRAVAYYSATNKPMPFHPPHYLAARPNQFGMPGIVPPYVPSQMLNIPQTSLQAKPVAQQMSSQGGAQGQGPYPYSLSEPAITLETGGKSLSEQNNYSNIPHEGKHTPLYERSSPINPAQSGSPNHVDSTYFPASSTSSSSDNDEGNGGAVNHVSGNKIGWEKPGTQSEGQTCGELGDQTKAEGSSSASSGSQAADVKGNQTSNPQIPCLLSMPTRNHMDITTPPLPPVAPEVLRVAEHRHKKGLMYPYIFHVLTKGEIKIAVSIEDEANKDLPPAALLYRPVRQYVYGVLFSLAESRKKTERLAFRKNRLPPEFSPVIIKEWAAYKGKSPQTPELVEALAFREWTCPNLKKLWLGKAVEDKNRRMRAFLACMRSDTPAMLNPTNVPTHLMVLCCVLRYMVQWPGVRILRRQELDAFLAQALSPKLYEPDQLQELKIENLDPRGIQLSALFMSGVDMALFANDACGQPIPWEHCCPWMYFDGKLFQTKLIKASREKVPLIDLCDGQAEQAAKVEKMRQSILEGLNFSRQNHPLPFPPPPAMPFYPASMYPRHFGPVPPPQGRGRGFAGVYGFGGPYGETVATGTYRAFRVAAAAGHSGAFSGNDSNRTSKFQGGVQPIPSQGGKLEIAGTVVGHWAGSRRGRGGRGPFPLQVVSVGGPARGRPRGVISTPVIRTFGRGGRYYGRGYKSQGAIQGKPPYAASAEEVAKELKSKSEESKSSLVSSDGSLAENGVVTEEKPASQMNGNTGDIRASNQSESALSNDSKMCNTNPHLNALNADSVCHKDDALEATVLKKEE
SIO_010081: FAM120A
subclass of: SO_0000673
so part of: FAM120A
location: join(561110..561514,566972..567218,571917..571999,579517..579645,580099..580195,581279..581379,581672..581955,582632..582719,586024..586248,588593..588767,594405..594654,595360..595474,596998..597207,598047..598230,599109..599246,600671..600812,604149..604245,606721..607032)
location: region:561110-607032:1
so has part: feature:561110-561514:1:exon
so has part: feature:566972-567218:1:exon
so has part: feature:571917-571999:1:exon
so has part: feature:579517-579645:1:exon
so has part: feature:580099-580195:1:exon
so has part: feature:581279-581379:1:exon
so has part: feature:581672-581955:1:exon
so has part: feature:582632-582719:1:exon
so has part: feature:586024-586248:1:exon
so has part: feature:588593-588767:1:exon
so has part: feature:594405-594654:1:exon
so has part: feature:595360-595474:1:exon
so has part: feature:596998-597207:1:exon
so has part: feature:598047-598230:1:exon
so has part: feature:599109-599246:1:exon
so has part: feature:600671-600812:1:exon
so has part: feature:604149-604245:1:exon
so has part: feature:606721-607032:1:exon

XP_021395229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:561110-561514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:566972-567218:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:571917-571999:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:579517-579645:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:580099-580195:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:581279-581379:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:581672-581955:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:582632-582719:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:586024-586248:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:588593-588767:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:594405-594654:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:595360-595474:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:596998-597207:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:598047-598230:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:599109-599246:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:600671-600812:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:604149-604245:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:606721-607032:1:exon

PHF2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: PHF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 615830..670120
location: region:615830-670120:1
so has part: feature:615830-670120:1:exon
subclass of: SO_0000010

110475426
type: Gene
SIO_000068: ncbigene

position:615830:1
position: 615830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:670120:1
position: 670120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615830-670120:1:exon

PHF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PHF2
product: PHD finger protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_021539556.2
SIO_010081: PHF2
subclass of: SO_0000673
so part of: PHF2
location: join(615830..615987,639952..640037,645648..645762,648145..648305,648810..648951,651296..651482,652042..652204,653060..653147,653706..653812,654109..654200,654517..654606,655376..655738,656527..656646,657226..657344,657686..657864,658071..658144,659179..659336,663660..663937,664972..665067,665971..666080,667226..667487,669023..670120)
location: region:615830-670120:1
so has part: feature:615830-615987:1:exon
so has part: feature:639952-640037:1:exon
so has part: feature:645648-645762:1:exon
so has part: feature:648145-648305:1:exon
so has part: feature:648810-648951:1:exon
so has part: feature:651296-651482:1:exon
so has part: feature:652042-652204:1:exon
so has part: feature:653060-653147:1:exon
so has part: feature:653706-653812:1:exon
so has part: feature:654109-654200:1:exon
so has part: feature:654517-654606:1:exon
so has part: feature:655376-655738:1:exon
so has part: feature:656527-656646:1:exon
so has part: feature:657226-657344:1:exon
so has part: feature:657686-657864:1:exon
so has part: feature:658071-658144:1:exon
so has part: feature:659179-659336:1:exon
so has part: feature:663660-663937:1:exon
so has part: feature:664972-665067:1:exon
so has part: feature:665971-666080:1:exon
so has part: feature:667226-667487:1:exon
so has part: feature:669023-670120:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:615830-615987:1:exon

position:615987:1
position: 615987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:639952-640037:1:exon

position:639952:1
position: 639952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640037:1
position: 640037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:645648-645762:1:exon

position:645648:1
position: 645648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645762:1
position: 645762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:648145-648305:1:exon

position:648145:1
position: 648145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648305:1
position: 648305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:648810-648951:1:exon

position:648810:1
position: 648810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648951:1
position: 648951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:651296-651482:1:exon

position:651296:1
position: 651296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651482:1
position: 651482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:652042-652204:1:exon

position:652042:1
position: 652042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652204:1
position: 652204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:653060-653147:1:exon

position:653060:1
position: 653060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:653147:1
position: 653147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:653706-653812:1:exon

position:653706:1
position: 653706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:653812:1
position: 653812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:654109-654200:1:exon

position:654109:1
position: 654109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654200:1
position: 654200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:654517-654606:1:exon

position:654517:1
position: 654517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654606:1
position: 654606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:655376-655738:1:exon

position:655376:1
position: 655376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:655738:1
position: 655738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:656527-656646:1:exon

position:656527:1
position: 656527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:656646:1
position: 656646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:657226-657344:1:exon

position:657226:1
position: 657226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:657344:1
position: 657344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:657686-657864:1:exon

position:657686:1
position: 657686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:657864:1
position: 657864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:658071-658144:1:exon

position:658071:1
position: 658071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:658144:1
position: 658144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:659179-659336:1:exon

position:659179:1
position: 659179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659336:1
position: 659336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:663660-663937:1:exon

position:663660:1
position: 663660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663937:1
position: 663937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:664972-665067:1:exon

position:664972:1
position: 664972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:665067:1
position: 665067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:665971-666080:1:exon

position:665971:1
position: 665971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666080:1
position: 666080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:667226-667487:1:exon

position:667226:1
position: 667226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:667487:1
position: 667487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:669023-670120:1:exon

position:669023:1
position: 669023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PHF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PHF2
product: PHD finger protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021539557.2
SIO_010081: PHF2
subclass of: SO_0000673
so part of: PHF2
location: join(615830..615987,639952..640037,645648..645762,648145..648305,648810..648951,651296..651482,652042..652204,653060..653147,653706..653812,654109..654200,654517..654606,655376..655738,656527..656646,657226..657344,657686..657864,658071..658144,659179..659336,663660..663937,665971..666080,667226..667487,669023..670120)
location: region:615830-670120:1
so has part: feature:615830-615987:1:exon
so has part: feature:639952-640037:1:exon
so has part: feature:645648-645762:1:exon
so has part: feature:648145-648305:1:exon
so has part: feature:648810-648951:1:exon
so has part: feature:651296-651482:1:exon
so has part: feature:652042-652204:1:exon
so has part: feature:653060-653147:1:exon
so has part: feature:653706-653812:1:exon
so has part: feature:654109-654200:1:exon
so has part: feature:654517-654606:1:exon
so has part: feature:655376-655738:1:exon
so has part: feature:656527-656646:1:exon
so has part: feature:657226-657344:1:exon
so has part: feature:657686-657864:1:exon
so has part: feature:658071-658144:1:exon
so has part: feature:659179-659336:1:exon
so has part: feature:663660-663937:1:exon
so has part: feature:665971-666080:1:exon
so has part: feature:667226-667487:1:exon
so has part: feature:669023-670120:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:615830-615987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:639952-640037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:645648-645762:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:648145-648305:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:648810-648951:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:651296-651482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:652042-652204:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:653060-653147:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:653706-653812:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:654109-654200:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:654517-654606:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:655376-655738:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:656527-656646:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:657226-657344:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:657686-657864:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:658071-658144:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:659179-659336:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:663660-663937:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:665971-666080:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:667226-667487:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:669023-670120:1:exon

PHF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PHF2
product: PHD finger protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021539559.2
SIO_010081: PHF2
subclass of: SO_0000673
so part of: PHF2
location: join(615831..615987,639952..640037,645648..645762,648145..648305,648810..648951,651296..651482,652042..652204,653060..653147,653706..653812,654109..654200,654517..654606,655376..655738,656527..656646,657226..657344,657686..657864,658071..658144,659179..659336,663660..663937,664972..665067,665971..666080,669023..670120)
location: region:615831-670120:1
so has part: feature:615831-615987:1:exon
so has part: feature:639952-640037:1:exon
so has part: feature:645648-645762:1:exon
so has part: feature:648145-648305:1:exon
so has part: feature:648810-648951:1:exon
so has part: feature:651296-651482:1:exon
so has part: feature:652042-652204:1:exon
so has part: feature:653060-653147:1:exon
so has part: feature:653706-653812:1:exon
so has part: feature:654109-654200:1:exon
so has part: feature:654517-654606:1:exon
so has part: feature:655376-655738:1:exon
so has part: feature:656527-656646:1:exon
so has part: feature:657226-657344:1:exon
so has part: feature:657686-657864:1:exon
so has part: feature:658071-658144:1:exon
so has part: feature:659179-659336:1:exon
so has part: feature:663660-663937:1:exon
so has part: feature:664972-665067:1:exon
so has part: feature:665971-666080:1:exon
so has part: feature:669023-670120:1:exon

position:615831:1
position: 615831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615831-615987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:639952-640037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:645648-645762:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:648145-648305:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:648810-648951:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:651296-651482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:652042-652204:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:653060-653147:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:653706-653812:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:654109-654200:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:654517-654606:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:655376-655738:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:656527-656646:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:657226-657344:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:657686-657864:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:658071-658144:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:659179-659336:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:663660-663937:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:664972-665067:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:665971-666080:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:669023-670120:1:exon

PHF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PHF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase PHF2 isoform X1
translation: MATVPVYCICRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHGKSTLKKKRNWHKHDTSQTTEVKPVQNGSQVFIKELRSRTFPSAEDIVVKVPGSQLTAEYLEEKGFAEPILVPKKDGLGLAVPAPTFYVSDVENYVGPERSVDVTDVTKQKDCKMKLKEFVDYYYSTNRKRVLNVTNLEFSDTRMSSFVEPPDIVKKLSWVENYWPDDALLAKPKVTKYCLICVKDSYTDFHIDSGGASAWYHVLKGEKIFYLIKPASANISLYERWQSAANHSEMFFADQVDKCYKCTVKQGQTLFIPSGWIYATLTPVDCLAFAGHFLHSLSVEMQMRAYEVERRLKIVSLTQFPNFETACWYMGKHLLEKFKGLHKAGQQPPAHLLQGAKILNGAFRSWTKKQALAEHEDELPENFKPAQLIKDLAKEIRLSENASKASKADTSANPTAEEICPVEKEEAPSPVQVTPLPPPLEKLPKKKTPKTVKTAKQLKPSKTPKTPKPSKPPKTPKVKGEGKKKGKKVKESPPPAIPNLDLLEAHTKEALTKIETPKKGKAAKNVLSVPNKESVSKQNEVEKFEVREQSKSKTEAKWKYKNSKPDSLLKMEEEHKSEKMPLSGNKDSKFTFSFSNKKLLGSKGVKTHLNTSVFGSLQNFKEEKAKPVRDEYEYVSDDGELKIDEFPIRRKKNTAKRELPFLSDKKEALHHTPVKKPKVESVPYKSEDSSDEDLLHIDTEAKPGRNSKVKKESGSAAGILDLLQASKEVGGLEYNTNSQPPASPSTQEAIQGMLSMANLQASESCLQTSWGTNQAKNNSFSTQNLKKTGGGGNKNAGKRLLKKSTKNSIDIEDYDEDQDHLDACFKDSDYVYPSLESDEDNPVFKSRSKKRKSSDDAPYSPTARVGPSVPRQDRPVREGTRVASIETGLAAAAAKLSQQEEQKGKKKKNTKKKLSAPNASKAAQEGSSPEPKLESQASSLTDHEYTAGASTFGVTQPNRGSQPMAPGVFLTQRKPSSSSQNNAFAKGKRTKKGMATAKQRLGKILKIHRNGKLLL
SIO_010081: PHF2
subclass of: SO_0000673
so part of: PHF2
location: join(615890..615987,639952..640037,645648..645762,648145..648305,648810..648951,651296..651482,652042..652204,653060..653147,653706..653812,654109..654200,654517..654606,655376..655738,656527..656646,657226..657344,657686..657864,658071..658144,659179..659336,663660..663937,664972..665067,665971..666080,667226..667487,669023..669111)
location: region:615890-669111:1
so has part: feature:615890-615987:1:exon
so has part: feature:639952-640037:1:exon
so has part: feature:645648-645762:1:exon
so has part: feature:648145-648305:1:exon
so has part: feature:648810-648951:1:exon
so has part: feature:651296-651482:1:exon
so has part: feature:652042-652204:1:exon
so has part: feature:653060-653147:1:exon
so has part: feature:653706-653812:1:exon
so has part: feature:654109-654200:1:exon
so has part: feature:654517-654606:1:exon
so has part: feature:655376-655738:1:exon
so has part: feature:656527-656646:1:exon
so has part: feature:657226-657344:1:exon
so has part: feature:657686-657864:1:exon
so has part: feature:658071-658144:1:exon
so has part: feature:659179-659336:1:exon
so has part: feature:663660-663937:1:exon
so has part: feature:664972-665067:1:exon
so has part: feature:665971-666080:1:exon
so has part: feature:667226-667487:1:exon
so has part: feature:669023-669111:1:exon

XP_021395231.1
type: Protein
SIO_000068: ncbiprotein

position:615890:1
position: 615890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669111:1
position: 669111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615890-615987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:639952-640037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:645648-645762:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:648145-648305:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:648810-648951:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:651296-651482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:652042-652204:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:653060-653147:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:653706-653812:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:654109-654200:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:654517-654606:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:655376-655738:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:656527-656646:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:657226-657344:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:657686-657864:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:658071-658144:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:659179-659336:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:663660-663937:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:664972-665067:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:665971-666080:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:667226-667487:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:669023-669111:1:exon

PHF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PHF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase PHF2 isoform X2
translation: MATVPVYCICRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHGKSTLKKKRNWHKHDTSQTTEVKPVQNGSQVFIKELRSRTFPSAEDIVVKVPGSQLTAEYLEEKGFAEPILVPKKDGLGLAVPAPTFYVSDVENYVGPERSVDVTDVTKQKDCKMKLKEFVDYYYSTNRKRVLNVTNLEFSDTRMSSFVEPPDIVKKLSWVENYWPDDALLAKPKVTKYCLICVKDSYTDFHIDSGGASAWYHVLKGEKIFYLIKPASANISLYERWQSAANHSEMFFADQVDKCYKCTVKQGQTLFIPSGWIYATLTPVDCLAFAGHFLHSLSVEMQMRAYEVERRLKIVSLTQFPNFETACWYMGKHLLEKFKGLHKAGQQPPAHLLQGAKILNGAFRSWTKKQALAEHEDELPENFKPAQLIKDLAKEIRLSENASKASKADTSANPTAEEICPVEKEEAPSPVQVTPLPPPLEKLPKKKTPKTVKTAKQLKPSKTPKTPKPSKPPKTPKVKGEGKKKGKKVKESPPPAIPNLDLLEAHTKEALTKIETPKKGKAAKNVLSVPNKESVSKQNEVEKFEVREQSKSKTEAKWKYKNSKPDSLLKMEEEHKSEKMPLSGNKDSKFTFSFSNKKLLGSKGVKTHLNTSVFGSLQNFKEEKAKPVRDEYEYVSDDGELKIDEFPIRRKKNTAKRELPFLSDKKEALHHTPVKKPKVESVPYKSEDSSDEDLLHIDTEAKPGRNSKVKKESGSAAGILDLLQASKEVGGLEYNTNSQPPASPSTQEAIQGMLSMANLQASESCLQTSWGTNQAKNNSFSTQNLKKTGGGGNKNAGKRLLKKSTKNSIDIEDYDEDQDHLDACFKDSDYARVGPSVPRQDRPVREGTRVASIETGLAAAAAKLSQQEEQKGKKKKNTKKKLSAPNASKAAQEGSSPEPKLESQASSLTDHEYTAGASTFGVTQPNRGSQPMAPGVFLTQRKPSSSSQNNAFAKGKRTKKGMATAKQRLGKILKIHRNGKLLL
SIO_010081: PHF2
subclass of: SO_0000673
so part of: PHF2
location: join(615890..615987,639952..640037,645648..645762,648145..648305,648810..648951,651296..651482,652042..652204,653060..653147,653706..653812,654109..654200,654517..654606,655376..655738,656527..656646,657226..657344,657686..657864,658071..658144,659179..659336,663660..663937,665971..666080,667226..667487,669023..669111)
location: region:615890-669111:1
so has part: feature:615890-615987:1:exon
so has part: feature:639952-640037:1:exon
so has part: feature:645648-645762:1:exon
so has part: feature:648145-648305:1:exon
so has part: feature:648810-648951:1:exon
so has part: feature:651296-651482:1:exon
so has part: feature:652042-652204:1:exon
so has part: feature:653060-653147:1:exon
so has part: feature:653706-653812:1:exon
so has part: feature:654109-654200:1:exon
so has part: feature:654517-654606:1:exon
so has part: feature:655376-655738:1:exon
so has part: feature:656527-656646:1:exon
so has part: feature:657226-657344:1:exon
so has part: feature:657686-657864:1:exon
so has part: feature:658071-658144:1:exon
so has part: feature:659179-659336:1:exon
so has part: feature:663660-663937:1:exon
so has part: feature:665971-666080:1:exon
so has part: feature:667226-667487:1:exon
so has part: feature:669023-669111:1:exon

XP_021395232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:615890-615987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:639952-640037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:645648-645762:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:648145-648305:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:648810-648951:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:651296-651482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:652042-652204:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:653060-653147:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:653706-653812:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:654109-654200:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:654517-654606:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:655376-655738:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:656527-656646:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:657226-657344:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:657686-657864:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:658071-658144:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:659179-659336:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:663660-663937:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:665971-666080:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:667226-667487:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:669023-669111:1:exon

PHF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PHF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase PHF2 isoform X3
translation: MATVPVYCICRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHGKSTLKKKRNWHKHDTSQTTEVKPVQNGSQVFIKELRSRTFPSAEDIVVKVPGSQLTAEYLEEKGFAEPILVPKKDGLGLAVPAPTFYVSDVENYVGPERSVDVTDVTKQKDCKMKLKEFVDYYYSTNRKRVLNVTNLEFSDTRMSSFVEPPDIVKKLSWVENYWPDDALLAKPKVTKYCLICVKDSYTDFHIDSGGASAWYHVLKGEKIFYLIKPASANISLYERWQSAANHSEMFFADQVDKCYKCTVKQGQTLFIPSGWIYATLTPVDCLAFAGHFLHSLSVEMQMRAYEVERRLKIVSLTQFPNFETACWYMGKHLLEKFKGLHKAGQQPPAHLLQGAKILNGAFRSWTKKQALAEHEDELPENFKPAQLIKDLAKEIRLSENASKASKADTSANPTAEEICPVEKEEAPSPVQVTPLPPPLEKLPKKKTPKTVKTAKQLKPSKTPKTPKPSKPPKTPKVKGEGKKKGKKVKESPPPAIPNLDLLEAHTKEALTKIETPKKGKAAKNVLSVPNKESVSKQNEVEKFEVREQSKSKTEAKWKYKNSKPDSLLKMEEEHKSEKMPLSGNKDSKFTFSFSNKKLLGSKGVKTHLNTSVFGSLQNFKEEKAKPVRDEYEYVSDDGELKIDEFPIRRKKNTAKRELPFLSDKKEALHHTPVKKPKVESVPYKSEDSSDEDLLHIDTEAKPGRNSKVKKESGSAAGILDLLQASKEVGGLEYNTNSQPPASPSTQEAIQGMLSMANLQASESCLQTSWGTNQAKNNSFSTQNLKKTGGGGNKNAGKRLLKKSTKNSIDIEDYDEDQDHLDACFKDSDYVYPSLESDEDNPVFKSRSKKRKSSDDAPYSPTARVGPSVPRQDRPVREGTRVASIETGLAAAAAKLSQQGSVRRRGWPRPSSGSARS
SIO_010081: PHF2
subclass of: SO_0000673
so part of: PHF2
location: join(615890..615987,639952..640037,645648..645762,648145..648305,648810..648951,651296..651482,652042..652204,653060..653147,653706..653812,654109..654200,654517..654606,655376..655738,656527..656646,657226..657344,657686..657864,658071..658144,659179..659336,663660..663937,664972..665067,665971..666080,669023..669079)
location: region:615890-669079:1
so has part: feature:615890-615987:1:exon
so has part: feature:639952-640037:1:exon
so has part: feature:645648-645762:1:exon
so has part: feature:648145-648305:1:exon
so has part: feature:648810-648951:1:exon
so has part: feature:651296-651482:1:exon
so has part: feature:652042-652204:1:exon
so has part: feature:653060-653147:1:exon
so has part: feature:653706-653812:1:exon
so has part: feature:654109-654200:1:exon
so has part: feature:654517-654606:1:exon
so has part: feature:655376-655738:1:exon
so has part: feature:656527-656646:1:exon
so has part: feature:657226-657344:1:exon
so has part: feature:657686-657864:1:exon
so has part: feature:658071-658144:1:exon
so has part: feature:659179-659336:1:exon
so has part: feature:663660-663937:1:exon
so has part: feature:664972-665067:1:exon
so has part: feature:665971-666080:1:exon
so has part: feature:669023-669079:1:exon

XP_021395234.1
type: Protein
SIO_000068: ncbiprotein

position:669079:1
position: 669079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615890-615987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:639952-640037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:645648-645762:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:648145-648305:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:648810-648951:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:651296-651482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:652042-652204:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:653060-653147:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:653706-653812:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:654109-654200:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:654517-654606:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:655376-655738:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:656527-656646:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:657226-657344:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:657686-657864:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:658071-658144:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:659179-659336:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:663660-663937:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:664972-665067:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:665971-666080:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:669023-669079:1:exon

BARX1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: BARX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(799542..802707)
location: region:799542-802707:-1
so has part: feature:799542-802707:-1:exon
subclass of: SO_0000010

110475415
type: Gene
SIO_000068: ncbigene

position:799542:-1
position: 799542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802707:-1
position: 802707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:799542-802707:-1:exon

BARX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: BARX1
product: BARX homeobox 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_021539524.1
SIO_010081: BARX1
subclass of: SO_0000673
so part of: BARX1
location: complement(join(799542..799706,800118..800202,800333..800618,802503..802707))
location: region:799542-802707:-1
so has part: feature:802503-802707:-1:exon
so has part: feature:800333-800618:-1:exon
so has part: feature:800118-800202:-1:exon
so has part: feature:799542-799706:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:802503-802707:-1:exon

position:802503:-1
position: 802503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:800333-800618:-1:exon

position:800333:-1
position: 800333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800618:-1
position: 800618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:800118-800202:-1:exon

position:800118:-1
position: 800118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800202:-1
position: 800202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:799542-799706:-1:exon

position:799706:-1
position: 799706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BARX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: BARX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein BarH-like 1
translation: MQHPLELGAARYFPAEAFPDHRSHRYRSFMIEEILTDPPDAKGAAPAGELLKFGVQALLSARPYHNHLAVLKAEPAAVFKFPLAPLGCSGLGSALLAAGSGLQGGSASPHLPLELHLRGKLEPGPPEPGKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKIVLQGGGLESPTKPKGRPKKNSIPSSEQLSEQERARDAEKPPESVGSPAEVSQEE
SIO_010081: BARX1
subclass of: SO_0000673
so part of: BARX1
location: complement(join(799542..799706,800118..800202,800333..800618,802503..802707))
location: region:799542-802707:-1
so has part: feature:802503-802707:-1:exon
so has part: feature:800333-800618:-1:exon
so has part: feature:800118-800202:-1:exon
so has part: feature:799542-799706:-1:exon

XP_021395199.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:802503-802707:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:800333-800618:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:800118-800202:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:799542-799706:-1:exon

PTPDC1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: PTPDC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 824996..849744
location: region:824996-849744:1
so has part: feature:824996-849744:1:exon
subclass of: SO_0000010

110475427
type: Gene
SIO_000068: ncbigene

position:824996:1
position: 824996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:849744:1
position: 849744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:824996-849744:1:exon

PTPDC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PTPDC1
product: protein tyrosine phosphatase domain containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021539560.1
SIO_010081: PTPDC1
subclass of: SO_0000673
so part of: PTPDC1
location: join(824996..825061,838764..838859,841491..841662,842359..842439,842661..842779,843508..843645,844316..845517,846182..846367,847083..847193,848004..849744)
location: region:824996-849744:1
so has part: feature:824996-825061:1:exon
so has part: feature:838764-838859:1:exon
so has part: feature:841491-841662:1:exon
so has part: feature:842359-842439:1:exon
so has part: feature:842661-842779:1:exon
so has part: feature:843508-843645:1:exon
so has part: feature:844316-845517:1:exon
so has part: feature:846182-846367:1:exon
so has part: feature:847083-847193:1:exon
so has part: feature:848004-849744:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:824996-825061:1:exon

position:825061:1
position: 825061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:838764-838859:1:exon

position:838764:1
position: 838764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:838859:1
position: 838859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:841491-841662:1:exon

position:841491:1
position: 841491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:841662:1
position: 841662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:842359-842439:1:exon

position:842359:1
position: 842359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:842439:1
position: 842439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:842661-842779:1:exon

position:842661:1
position: 842661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:842779:1
position: 842779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:843508-843645:1:exon

position:843508:1
position: 843508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:843645:1
position: 843645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:844316-845517:1:exon

position:844316:1
position: 844316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:845517:1
position: 845517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:846182-846367:1:exon

position:846182:1
position: 846182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:846367:1
position: 846367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:847083-847193:1:exon

position:847083:1
position: 847083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:847193:1
position: 847193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:848004-849744:1:exon

position:848004:1
position: 848004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTPDC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PTPDC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein tyrosine phosphatase domain-containing protein 1 isoform X3
translation: MRSGTGRCRRSGSSGPAGTAMAAGVLLQNEQPYSSLIESSVYLANMSSGTTRRPTAKYTKVGERLRHVIPGHMQCSMACGGRACKYENPARWAEHEQAIKGLYSSWITDNILAMARPSTEVIEKYNIIEQFERCGIKTIINLQRPGEHASCGNPLEQESGFTYLPEAFMEAGIYFYNFGWKDYGVASLTTILDMVKVMSFALQEGRVAVHCHAGLGRTGVLIACYLVFATRMSADQAILFVRAKRPNSIQTRGQLLCVREFSQFLVPLRNVFACCEPKAHAVTLSQYLTRQRHLLHGLESRHLKHVPKLIHLVCKLLLDLAENRQVVEAELLDIPDLSAEIEKTMSQLASMELKQELARHDSDTSDSSHTHSSALDSQDSHFSLGHESDDFCKRRNVECLQPLTHLKRRLSYSESDLRRTEFLLEQDDTAWTVPAQILVNNKPKQNSGEECSVIGEAKPQLELNKEALVRNTCMFSSQRRFHLDGQRGGSYDRRSSIKEVQRSKTFSSGLASMHNPKEPGMPRHSFANETVHWKDHKTNIYGRRVYLSEDSDSSSSSKVSFSIGYESKSGRELSETIPHIVLQSELSLEARRILAAKALADLNEFLGEDEVKQKVEMWQKELNSQDGAWDKICTERDPFILCSLMWSWIEQLKEPIISKDDIDMLAKNCTESQDALYLLRKEQCQTIVCILHCVVNLQVLPADVEEALLARAIKAFTKTSFNSENGPYVYNTLKTVFKQTLEEKRKRIKEGTENP
SIO_010081: PTPDC1
subclass of: SO_0000673
so part of: PTPDC1
location: join(825013..825061,838764..838859,841491..841662,842359..842439,842661..842779,843508..843645,844316..845517,846182..846367,847083..847193,848004..848117)
location: region:825013-848117:1
so has part: feature:825013-825061:1:exon
so has part: feature:838764-838859:1:exon
so has part: feature:841491-841662:1:exon
so has part: feature:842359-842439:1:exon
so has part: feature:842661-842779:1:exon
so has part: feature:843508-843645:1:exon
so has part: feature:844316-845517:1:exon
so has part: feature:846182-846367:1:exon
so has part: feature:847083-847193:1:exon
so has part: feature:848004-848117:1:exon

XP_021395235.1
type: Protein
SIO_000068: ncbiprotein

position:825013:1
position: 825013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:848117:1
position: 848117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825013-825061:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:838764-838859:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:841491-841662:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:842359-842439:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:842661-842779:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:843508-843645:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:844316-845517:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:846182-846367:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:847083-847193:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:848004-848117:1:exon

PTPDC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PTPDC1
product: protein tyrosine phosphatase domain containing 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021539564.1
SIO_010081: PTPDC1
subclass of: SO_0000673
so part of: PTPDC1
location: join(825020..825065,838763..838859,841491..841662,842359..842439,842661..842779,843508..843645,844316..845517,846182..846367,847083..847193,848004..849744)
location: region:825020-849744:1
so has part: feature:825020-825065:1:exon
so has part: feature:838763-838859:1:exon
so has part: feature:841491-841662:1:exon
so has part: feature:842359-842439:1:exon
so has part: feature:842661-842779:1:exon
so has part: feature:843508-843645:1:exon
so has part: feature:844316-845517:1:exon
so has part: feature:846182-846367:1:exon
so has part: feature:847083-847193:1:exon
so has part: feature:848004-849744:1:exon

position:825020:1
position: 825020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:825020-825065:1:exon

position:825065:1
position: 825065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:838763-838859:1:exon

position:838763:1
position: 838763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:841491-841662:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:842359-842439:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:842661-842779:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:843508-843645:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:844316-845517:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:846182-846367:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:847083-847193:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:848004-849744:1:exon

PTPDC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PTPDC1
product: protein tyrosine phosphatase domain containing 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021539563.2
SIO_010081: PTPDC1
subclass of: SO_0000673
so part of: PTPDC1
location: join(829013..829033,838767..838859,841491..841662,842359..842439,842661..842779,843508..843645,844316..845517,846182..846367,847083..847193,848004..849744)
location: region:829013-849744:1
so has part: feature:829013-829033:1:exon
so has part: feature:838767-838859:1:exon
so has part: feature:841491-841662:1:exon
so has part: feature:842359-842439:1:exon
so has part: feature:842661-842779:1:exon
so has part: feature:843508-843645:1:exon
so has part: feature:844316-845517:1:exon
so has part: feature:846182-846367:1:exon
so has part: feature:847083-847193:1:exon
so has part: feature:848004-849744:1:exon

position:829013:1
position: 829013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:829013-829033:1:exon

position:829033:1
position: 829033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:838767-838859:1:exon

position:838767:1
position: 838767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:841491-841662:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:842359-842439:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:842661-842779:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:843508-843645:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:844316-845517:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:846182-846367:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:847083-847193:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:848004-849744:1:exon

PTPDC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PTPDC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein tyrosine phosphatase domain-containing protein 1 isoform X4
translation: MSTAMAAGVLLQNEQPYSSLIESSVYLANMSSGTTRRPTAKYTKVGERLRHVIPGHMQCSMACGGRACKYENPARWAEHEQAIKGLYSSWITDNILAMARPSTEVIEKYNIIEQFERCGIKTIINLQRPGEHASCGNPLEQESGFTYLPEAFMEAGIYFYNFGWKDYGVASLTTILDMVKVMSFALQEGRVAVHCHAGLGRTGVLIACYLVFATRMSADQAILFVRAKRPNSIQTRGQLLCVREFSQFLVPLRNVFACCEPKAHAVTLSQYLTRQRHLLHGLESRHLKHVPKLIHLVCKLLLDLAENRQVVEAELLDIPDLSAEIEKTMSQLASMELKQELARHDSDTSDSSHTHSSALDSQDSHFSLGHESDDFCKRRNVECLQPLTHLKRRLSYSESDLRRTEFLLEQDDTAWTVPAQILVNNKPKQNSGEECSVIGEAKPQLELNKEALVRNTCMFSSQRRFHLDGQRGGSYDRRSSIKEVQRSKTFSSGLASMHNPKEPGMPRHSFANETVHWKDHKTNIYGRRVYLSEDSDSSSSSKVSFSIGYESKSGRELSETIPHIVLQSELSLEARRILAAKALADLNEFLGEDEVKQKVEMWQKELNSQDGAWDKICTERDPFILCSLMWSWIEQLKEPIISKDDIDMLAKNCTESQDALYLLRKEQCQTIVCILHCVVNLQVLPADVEEALLARAIKAFTKTSFNSENGPYVYNTLKTVFKQTLEEKRKRIKEGTENP
SIO_010081: PTPDC1
subclass of: SO_0000673
so part of: PTPDC1
location: join(829030..829033,838767..838859,841491..841662,842359..842439,842661..842779,843508..843645,844316..845517,846182..846367,847083..847193,848004..848117)
location: region:829030-848117:1
so has part: feature:829030-829033:1:exon
so has part: feature:838767-838859:1:exon
so has part: feature:841491-841662:1:exon
so has part: feature:842359-842439:1:exon
so has part: feature:842661-842779:1:exon
so has part: feature:843508-843645:1:exon
so has part: feature:844316-845517:1:exon
so has part: feature:846182-846367:1:exon
so has part: feature:847083-847193:1:exon
so has part: feature:848004-848117:1:exon

XP_021395238.1
type: Protein
SIO_000068: ncbiprotein

position:829030:1
position: 829030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:829030-829033:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:838767-838859:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:841491-841662:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:842359-842439:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:842661-842779:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:843508-843645:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:844316-845517:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:846182-846367:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:847083-847193:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:848004-848117:1:exon

PTPDC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PTPDC1
product: protein tyrosine phosphatase domain containing 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021539565.1
SIO_010081: PTPDC1
subclass of: SO_0000673
so part of: PTPDC1
location: join(829069..829231,838767..838859,841491..841662,842359..842439,842661..842779,843508..843645,844316..845517,846182..846367,847083..847193,848004..849744)
location: region:829069-849744:1
so has part: feature:829069-829231:1:exon
so has part: feature:838767-838859:1:exon
so has part: feature:841491-841662:1:exon
so has part: feature:842359-842439:1:exon
so has part: feature:842661-842779:1:exon
so has part: feature:843508-843645:1:exon
so has part: feature:844316-845517:1:exon
so has part: feature:846182-846367:1:exon
so has part: feature:847083-847193:1:exon
so has part: feature:848004-849744:1:exon

position:829069:1
position: 829069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:829069-829231:1:exon

position:829231:1
position: 829231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:838767-838859:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:841491-841662:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:842359-842439:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:842661-842779:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:843508-843645:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:844316-845517:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:846182-846367:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:847083-847193:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:848004-849744:1:exon

PTPDC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PTPDC1
product: protein tyrosine phosphatase domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021539562.1
SIO_010081: PTPDC1
subclass of: SO_0000673
so part of: PTPDC1
location: join(829936..831017,838767..838859,841491..841662,842359..842439,842661..842779,843508..843645,844316..845517,846182..846367,847083..847193,848004..849744)
location: region:829936-849744:1
so has part: feature:829936-831017:1:exon
so has part: feature:838767-838859:1:exon
so has part: feature:841491-841662:1:exon
so has part: feature:842359-842439:1:exon
so has part: feature:842661-842779:1:exon
so has part: feature:843508-843645:1:exon
so has part: feature:844316-845517:1:exon
so has part: feature:846182-846367:1:exon
so has part: feature:847083-847193:1:exon
so has part: feature:848004-849744:1:exon

position:829936:1
position: 829936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:829936-831017:1:exon

position:831017:1
position: 831017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:838767-838859:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:841491-841662:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:842359-842439:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:842661-842779:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:843508-843645:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:844316-845517:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:846182-846367:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:847083-847193:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:848004-849744:1:exon

PTPDC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PTPDC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein tyrosine phosphatase domain-containing protein 1 isoform X2
translation: MFLVVHTAAMKGSALTHSFCRVTGTAMAAGVLLQNEQPYSSLIESSVYLANMSSGTTRRPTAKYTKVGERLRHVIPGHMQCSMACGGRACKYENPARWAEHEQAIKGLYSSWITDNILAMARPSTEVIEKYNIIEQFERCGIKTIINLQRPGEHASCGNPLEQESGFTYLPEAFMEAGIYFYNFGWKDYGVASLTTILDMVKVMSFALQEGRVAVHCHAGLGRTGVLIACYLVFATRMSADQAILFVRAKRPNSIQTRGQLLCVREFSQFLVPLRNVFACCEPKAHAVTLSQYLTRQRHLLHGLESRHLKHVPKLIHLVCKLLLDLAENRQVVEAELLDIPDLSAEIEKTMSQLASMELKQELARHDSDTSDSSHTHSSALDSQDSHFSLGHESDDFCKRRNVECLQPLTHLKRRLSYSESDLRRTEFLLEQDDTAWTVPAQILVNNKPKQNSGEECSVIGEAKPQLELNKEALVRNTCMFSSQRRFHLDGQRGGSYDRRSSIKEVQRSKTFSSGLASMHNPKEPGMPRHSFANETVHWKDHKTNIYGRRVYLSEDSDSSSSSKVSFSIGYESKSGRELSETIPHIVLQSELSLEARRILAAKALADLNEFLGEDEVKQKVEMWQKELNSQDGAWDKICTERDPFILCSLMWSWIEQLKEPIISKDDIDMLAKNCTESQDALYLLRKEQCQTIVCILHCVVNLQVLPADVEEALLARAIKAFTKTSFNSENGPYVYNTLKTVFKQTLEEKRKRIKEGTENP
SIO_010081: PTPDC1
subclass of: SO_0000673
so part of: PTPDC1
location: join(830948..831017,838767..838859,841491..841662,842359..842439,842661..842779,843508..843645,844316..845517,846182..846367,847083..847193,848004..848117)
location: region:830948-848117:1
so has part: feature:830948-831017:1:exon
so has part: feature:838767-838859:1:exon
so has part: feature:841491-841662:1:exon
so has part: feature:842359-842439:1:exon
so has part: feature:842661-842779:1:exon
so has part: feature:843508-843645:1:exon
so has part: feature:844316-845517:1:exon
so has part: feature:846182-846367:1:exon
so has part: feature:847083-847193:1:exon
so has part: feature:848004-848117:1:exon

XP_021395237.1
type: Protein
SIO_000068: ncbiprotein

position:830948:1
position: 830948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:830948-831017:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:838767-838859:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:841491-841662:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:842359-842439:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:842661-842779:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:843508-843645:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:844316-845517:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:846182-846367:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:847083-847193:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:848004-848117:1:exon

PTPDC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PTPDC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein tyrosine phosphatase domain-containing protein 1 isoform X5
translation: MAAGVLLQNEQPYSSLIESSVYLANMSSGTTRRPTAKYTKVGERLRHVIPGHMQCSMACGGRACKYENPARWAEHEQAIKGLYSSWITDNILAMARPSTEVIEKYNIIEQFERCGIKTIINLQRPGEHASCGNPLEQESGFTYLPEAFMEAGIYFYNFGWKDYGVASLTTILDMVKVMSFALQEGRVAVHCHAGLGRTGVLIACYLVFATRMSADQAILFVRAKRPNSIQTRGQLLCVREFSQFLVPLRNVFACCEPKAHAVTLSQYLTRQRHLLHGLESRHLKHVPKLIHLVCKLLLDLAENRQVVEAELLDIPDLSAEIEKTMSQLASMELKQELARHDSDTSDSSHTHSSALDSQDSHFSLGHESDDFCKRRNVECLQPLTHLKRRLSYSESDLRRTEFLLEQDDTAWTVPAQILVNNKPKQNSGEECSVIGEAKPQLELNKEALVRNTCMFSSQRRFHLDGQRGGSYDRRSSIKEVQRSKTFSSGLASMHNPKEPGMPRHSFANETVHWKDHKTNIYGRRVYLSEDSDSSSSSKVSFSIGYESKSGRELSETIPHIVLQSELSLEARRILAAKALADLNEFLGEDEVKQKVEMWQKELNSQDGAWDKICTERDPFILCSLMWSWIEQLKEPIISKDDIDMLAKNCTESQDALYLLRKEQCQTIVCILHCVVNLQVLPADVEEALLARAIKAFTKTSFNSENGPYVYNTLKTVFKQTLEEKRKRIKEGTENP
SIO_010081: PTPDC1
subclass of: SO_0000673
so part of: PTPDC1
location: join(838775..838859,841491..841662,842359..842439,842661..842779,843508..843645,844316..845517,846182..846367,847083..847193,848004..848117)
location: region:838775-848117:1
so has part: feature:838775-838859:1:exon
so has part: feature:841491-841662:1:exon
so has part: feature:842359-842439:1:exon
so has part: feature:842661-842779:1:exon
so has part: feature:843508-843645:1:exon
so has part: feature:844316-845517:1:exon
so has part: feature:846182-846367:1:exon
so has part: feature:847083-847193:1:exon
so has part: feature:848004-848117:1:exon

XP_021395239.1
type: Protein
SIO_000068: ncbiprotein

position:838775:1
position: 838775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:838775-838859:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:841491-841662:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:842359-842439:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:842661-842779:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:843508-843645:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:844316-845517:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:846182-846367:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:847083-847193:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:848004-848117:1:exon

PTPDC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PTPDC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein tyrosine phosphatase domain-containing protein 1 isoform X5
translation: MAAGVLLQNEQPYSSLIESSVYLANMSSGTTRRPTAKYTKVGERLRHVIPGHMQCSMACGGRACKYENPARWAEHEQAIKGLYSSWITDNILAMARPSTEVIEKYNIIEQFERCGIKTIINLQRPGEHASCGNPLEQESGFTYLPEAFMEAGIYFYNFGWKDYGVASLTTILDMVKVMSFALQEGRVAVHCHAGLGRTGVLIACYLVFATRMSADQAILFVRAKRPNSIQTRGQLLCVREFSQFLVPLRNVFACCEPKAHAVTLSQYLTRQRHLLHGLESRHLKHVPKLIHLVCKLLLDLAENRQVVEAELLDIPDLSAEIEKTMSQLASMELKQELARHDSDTSDSSHTHSSALDSQDSHFSLGHESDDFCKRRNVECLQPLTHLKRRLSYSESDLRRTEFLLEQDDTAWTVPAQILVNNKPKQNSGEECSVIGEAKPQLELNKEALVRNTCMFSSQRRFHLDGQRGGSYDRRSSIKEVQRSKTFSSGLASMHNPKEPGMPRHSFANETVHWKDHKTNIYGRRVYLSEDSDSSSSSKVSFSIGYESKSGRELSETIPHIVLQSELSLEARRILAAKALADLNEFLGEDEVKQKVEMWQKELNSQDGAWDKICTERDPFILCSLMWSWIEQLKEPIISKDDIDMLAKNCTESQDALYLLRKEQCQTIVCILHCVVNLQVLPADVEEALLARAIKAFTKTSFNSENGPYVYNTLKTVFKQTLEEKRKRIKEGTENP
SIO_010081: PTPDC1
subclass of: SO_0000673
so part of: PTPDC1
location: join(838775..838859,841491..841662,842359..842439,842661..842779,843508..843645,844316..845517,846182..846367,847083..847193,848004..848117)
location: region:838775-848117:1
so has part: feature:838775-838859:1:exon
so has part: feature:841491-841662:1:exon
so has part: feature:842359-842439:1:exon
so has part: feature:842661-842779:1:exon
so has part: feature:843508-843645:1:exon
so has part: feature:844316-845517:1:exon
so has part: feature:846182-846367:1:exon
so has part: feature:847083-847193:1:exon
so has part: feature:848004-848117:1:exon

XP_021395240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:838775-838859:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:841491-841662:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:842359-842439:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:842661-842779:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:843508-843645:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:844316-845517:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:846182-846367:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:847083-847193:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:848004-848117:1:exon

PTPDC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PTPDC1
product: protein tyrosine phosphatase domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021539561.1
SIO_010081: PTPDC1
subclass of: SO_0000673
so part of: PTPDC1
location: join(840671..840965,841491..841662,842359..842439,842661..842779,843508..843645,844316..845517,846182..846367,847083..847193,848004..849744)
location: region:840671-849744:1
so has part: feature:840671-840965:1:exon
so has part: feature:841491-841662:1:exon
so has part: feature:842359-842439:1:exon
so has part: feature:842661-842779:1:exon
so has part: feature:843508-843645:1:exon
so has part: feature:844316-845517:1:exon
so has part: feature:846182-846367:1:exon
so has part: feature:847083-847193:1:exon
so has part: feature:848004-849744:1:exon

position:840671:1
position: 840671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:840671-840965:1:exon

position:840965:1
position: 840965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:841491-841662:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:842359-842439:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:842661-842779:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:843508-843645:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:844316-845517:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:846182-846367:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:847083-847193:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:848004-849744:1:exon

PTPDC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PTPDC1
product: protein tyrosine phosphatase domain containing 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_031505917.1
SIO_010081: PTPDC1
subclass of: SO_0000673
so part of: PTPDC1
location: join(840671..840965,841491..841662,842359..842439,842661..842779,843508..843645,844316..845517,846186..846291)
location: region:840671-846291:1
so has part: feature:840671-840965:1:exon
so has part: feature:841491-841662:1:exon
so has part: feature:842359-842439:1:exon
so has part: feature:842661-842779:1:exon
so has part: feature:843508-843645:1:exon
so has part: feature:844316-845517:1:exon
so has part: feature:846186-846291:1:exon

position:846291:1
position: 846291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:840671-840965:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:841491-841662:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:842359-842439:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:842661-842779:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:843508-843645:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:844316-845517:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:846186-846291:1:exon

position:846186:1
position: 846186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTPDC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PTPDC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein tyrosine phosphatase domain-containing protein 1 isoform X1
translation: MQPSPRRRSAVSIFSHFFQGRRHSSSDPLLRLSQRRRSSVVELLSSSTHRVMVALSSLSPEELDATFPEKERTTRRPTAKYTKVGERLRHVIPGHMQCSMACGGRACKYENPARWAEHEQAIKGLYSSWITDNILAMARPSTEVIEKYNIIEQFERCGIKTIINLQRPGEHASCGNPLEQESGFTYLPEAFMEAGIYFYNFGWKDYGVASLTTILDMVKVMSFALQEGRVAVHCHAGLGRTGVLIACYLVFATRMSADQAILFVRAKRPNSIQTRGQLLCVREFSQFLVPLRNVFACCEPKAHAVTLSQYLTRQRHLLHGLESRHLKHVPKLIHLVCKLLLDLAENRQVVEAELLDIPDLSAEIEKTMSQLASMELKQELARHDSDTSDSSHTHSSALDSQDSHFSLGHESDDFCKRRNVECLQPLTHLKRRLSYSESDLRRTEFLLEQDDTAWTVPAQILVNNKPKQNSGEECSVIGEAKPQLELNKEALVRNTCMFSSQRRFHLDGQRGGSYDRRSSIKEVQRSKTFSSGLASMHNPKEPGMPRHSFANETVHWKDHKTNIYGRRVYLSEDSDSSSSSKVSFSIGYESKSGRELSETIPHIVLQSELSLEARRILAAKALADLNEFLGEDEVKQKVEMWQKELNSQDGAWDKICTERDPFILCSLMWSWIEQLKEPIISKDDIDMLAKNCTESQDALYLLRKEQCQTIVCILHCVVNLQVLPADVEEALLARAIKAFTKTSFNSENGPYVYNTLKTVFKQTLEEKRKRIKEGTENP
SIO_010081: PTPDC1
subclass of: SO_0000673
so part of: PTPDC1
location: join(840752..840965,841491..841662,842359..842439,842661..842779,843508..843645,844316..845517,846182..846367,847083..847193,848004..848117)
location: region:840752-848117:1
so has part: feature:840752-840965:1:exon
so has part: feature:841491-841662:1:exon
so has part: feature:842359-842439:1:exon
so has part: feature:842661-842779:1:exon
so has part: feature:843508-843645:1:exon
so has part: feature:844316-845517:1:exon
so has part: feature:846182-846367:1:exon
so has part: feature:847083-847193:1:exon
so has part: feature:848004-848117:1:exon

XP_021395236.1
type: Protein
SIO_000068: ncbiprotein

position:840752:1
position: 840752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:840752-840965:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:841491-841662:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:842359-842439:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:842661-842779:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:843508-843645:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:844316-845517:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:846182-846367:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:847083-847193:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:848004-848117:1:exon

PTPDC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PTPDC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein tyrosine phosphatase domain-containing protein 1 isoform X6
translation: MQPSPRRRSAVSIFSHFFQGRRHSSSDPLLRLSQRRRSSVVELLSSSTHRVMVALSSLSPEELDATFPEKERTTRRPTAKYTKVGERLRHVIPGHMQCSMACGGRACKYENPARWAEHEQAIKGLYSSWITDNILAMARPSTEVIEKYNIIEQFERCGIKTIINLQRPGEHASCGNPLEQESGFTYLPEAFMEAGIYFYNFGWKDYGVASLTTILDMVKVMSFALQEGRVAVHCHAGLGRTGVLIACYLVFATRMSADQAILFVRAKRPNSIQTRGQLLCVREFSQFLVPLRNVFACCEPKAHAVTLSQYLTRQRHLLHGLESRHLKHVPKLIHLVCKLLLDLAENRQVVEAELLDIPDLSAEIEKTMSQLASMELKQELARHDSDTSDSSHTHSSALDSQDSHFSLGHESDDFCKRRNVECLQPLTHLKRRLSYSESDLRRTEFLLEQDDTAWTVPAQILVNNKPKQNSGEECSVIGEAKPQLELNKEALVRNTCMFSSQRRFHLDGQRGGSYDRRSSIKEVQRSKTFSSGLASMHNPKEPGMPRHSFANETVHWKDHKTNIYGRRVYLSEDSDSSSSSKVSFSIGYESKSGRELSETIPHIVLQSELSLEARRILAAKALADLNEFLGEDEVKQKVEMWQN
SIO_010081: PTPDC1
subclass of: SO_0000673
so part of: PTPDC1
location: join(840752..840965,841491..841662,842359..842439,842661..842779,843508..843645,844316..845517,846186..846191)
location: region:840752-846191:1
so has part: feature:840752-840965:1:exon
so has part: feature:841491-841662:1:exon
so has part: feature:842359-842439:1:exon
so has part: feature:842661-842779:1:exon
so has part: feature:843508-843645:1:exon
so has part: feature:844316-845517:1:exon
so has part: feature:846186-846191:1:exon

XP_031361777.1
type: Protein
SIO_000068: ncbiprotein

position:846191:1
position: 846191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:840752-840965:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:841491-841662:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:842359-842439:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:842661-842779:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:843508-843645:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:844316-845517:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:846186-846191:1:exon

LOC110479432
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110479432
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 892532..900960
location: region:892532-900960:1
so has part: feature:892532-900960:1:exon
subclass of: SO_0000011

110479432
type: Gene
SIO_000068: ncbigene

position:892532:1
position: 892532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:900960:1
position: 900960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:892532-900960:1:exon

LOC110479432
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110479432
product: uncharacterized LOC110479432
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 5 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_002466925.2
SIO_010081: LOC110479432
subclass of: SO_0000673
so part of: LOC110479432
location: join(892532..892743,897717..900960)
location: region:892532-900960:1
so has part: feature:892532-892743:1:exon
so has part: feature:897717-900960:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:892532-892743:1:exon

position:892743:1
position: 892743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:897717-900960:1:exon

position:897717:1
position: 897717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WNT7A
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: WNT7A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 922222..956988
location: region:922222-956988:1
so has part: feature:922222-956988:1:exon
subclass of: SO_0000010

110479430
type: Gene
SIO_000068: ncbigene

position:922222:1
position: 922222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:956988:1
position: 956988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:922222-956988:1:exon

WNT7A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: WNT7A
product: Wnt family member 7A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 9 ESTs, 30 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021546751.1
SIO_010081: WNT7A
subclass of: SO_0000673
so part of: WNT7A
location: join(922222..922481,923372..923598,934114..934385,953581..956988)
location: region:922222-956988:1
so has part: feature:922222-922481:1:exon
so has part: feature:923372-923598:1:exon
so has part: feature:934114-934385:1:exon
so has part: feature:953581-956988:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:922222-922481:1:exon

position:922481:1
position: 922481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:923372-923598:1:exon

position:923372:1
position: 923372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:923598:1
position: 923598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:934114-934385:1:exon

position:934114:1
position: 934114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:934385:1
position: 934385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:953581-956988:1:exon

position:953581:1
position: 953581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WNT7A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: WNT7A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Wnt-7a
translation: MNRKTRRWIFHIFLSLGIVYIKIGGFSSVVALGASIICNKIPGLAPRQRAICQSRPDAIIVIGEGSQMGINECQFQFRNGRWNCSALGERTVFGKELKVGSREAAFTYAIIAAGVAHAITAACTQGNLSDCGCDKEKQGQYHKEEGWKWGGCSADIRYGIGFAKVFVDAREIKQNARTLMNLHNNEAGRKILEENMKLECKCHGVSGSCTTKTCWTTLPKFRELGYILKDKYNEAVQVEPVRASRNKRPTFLKIKKPLSYRKPMDTDLVYIEKSPNYCEEDPVTGSVGTQGRMCNKTAQQSNGCDLMCCGRGYNTHQYSRVWQCNCKFHWCCYVKCNTCSERTEVYTCK
SIO_010081: WNT7A
subclass of: SO_0000673
so part of: WNT7A
location: join(922411..922481,923372..923598,934114..934385,953581..954060)
location: region:922411-954060:1
so has part: feature:922411-922481:1:exon
so has part: feature:923372-923598:1:exon
so has part: feature:934114-934385:1:exon
so has part: feature:953581-954060:1:exon

XP_021402426.1
type: Protein
SIO_000068: ncbiprotein

position:922411:1
position: 922411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954060:1
position: 954060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:922411-922481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:923372-923598:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:934114-934385:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:953581-954060:1:exon

LOC110479433
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110479433
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1072155..1072872
location: region:1072155-1072872:1
so has part: feature:1072155-1072872:1:exon

110479433
type: Gene
SIO_000068: ncbigene

position:1072155:1
position: 1072155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1072872:1
position: 1072872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1072155-1072872:1:exon

LOC110479433
type: Exon
subclass of: SO_0000147
RO_0002162: 299123
gene: LOC110479433
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC110479433
subclass of: SO_0000673
so part of: LOC110479433
location: 1072155..1072872
location: region:1072155-1072872:1
so has part: feature:1072155-1072872:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1072155-1072872:1:exon

FBLN2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: FBLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1082066..1174131)
location: region:1082066-1174131:-1
so has part: feature:1082066-1174131:-1:exon
subclass of: SO_0000010

110479431
type: Gene
SIO_000068: ncbigene

position:1082066:-1
position: 1082066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1174131:-1
position: 1174131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1082066-1174131:-1:exon

FBLN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: FBLN2
product: fibulin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021546754.2
SIO_010081: FBLN2
subclass of: SO_0000673
so part of: FBLN2
location: complement(join(1082066..1084143,1085547..1085670,1087831..1087959,1088933..1089049,1089648..1089773,1090447..1090575,1093852..1093995,1094304..1094441,1095509..1095643,1100956..1101096,1102457..1102558,1102988..1103104,1105057..1105263,1106064..1106250,1110469..1110598,1112713..1112824,1148741..1150195,1173836..1174131))
location: region:1082066-1174131:-1
so has part: feature:1173836-1174131:-1:exon
so has part: feature:1148741-1150195:-1:exon
so has part: feature:1112713-1112824:-1:exon
so has part: feature:1110469-1110598:-1:exon
so has part: feature:1106064-1106250:-1:exon
so has part: feature:1105057-1105263:-1:exon
so has part: feature:1102988-1103104:-1:exon
so has part: feature:1102457-1102558:-1:exon
so has part: feature:1100956-1101096:-1:exon
so has part: feature:1095509-1095643:-1:exon
so has part: feature:1094304-1094441:-1:exon
so has part: feature:1093852-1093995:-1:exon
so has part: feature:1090447-1090575:-1:exon
so has part: feature:1089648-1089773:-1:exon
so has part: feature:1088933-1089049:-1:exon
so has part: feature:1087831-1087959:-1:exon
so has part: feature:1085547-1085670:-1:exon
so has part: feature:1082066-1084143:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1173836-1174131:-1:exon

position:1173836:-1
position: 1173836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1148741-1150195:-1:exon

position:1148741:-1
position: 1148741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1150195:-1
position: 1150195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1112713-1112824:-1:exon

position:1112713:-1
position: 1112713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1112824:-1
position: 1112824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1110469-1110598:-1:exon

position:1110469:-1
position: 1110469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1110598:-1
position: 1110598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1106064-1106250:-1:exon

position:1106064:-1
position: 1106064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1106250:-1
position: 1106250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1105057-1105263:-1:exon

position:1105057:-1
position: 1105057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1105263:-1
position: 1105263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1102988-1103104:-1:exon

position:1102988:-1
position: 1102988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1103104:-1
position: 1103104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1102457-1102558:-1:exon

position:1102457:-1
position: 1102457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1102558:-1
position: 1102558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1100956-1101096:-1:exon

position:1100956:-1
position: 1100956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1101096:-1
position: 1101096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1095509-1095643:-1:exon

position:1095509:-1
position: 1095509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1095643:-1
position: 1095643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1094304-1094441:-1:exon

position:1094304:-1
position: 1094304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1094441:-1
position: 1094441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1093852-1093995:-1:exon

position:1093852:-1
position: 1093852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1093995:-1
position: 1093995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1090447-1090575:-1:exon

position:1090447:-1
position: 1090447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1090575:-1
position: 1090575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1089648-1089773:-1:exon

position:1089648:-1
position: 1089648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1089773:-1
position: 1089773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1088933-1089049:-1:exon

position:1088933:-1
position: 1088933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1089049:-1
position: 1089049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1087831-1087959:-1:exon

position:1087831:-1
position: 1087831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1087959:-1
position: 1087959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1085547-1085670:-1:exon

position:1085547:-1
position: 1085547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1085670:-1
position: 1085670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1082066-1084143:-1:exon

position:1084143:-1
position: 1084143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FBLN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: FBLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibulin-2
translation: MARAWSWQQSPWNALLLLLLCTGGCQAQRDCTGAECQALENCIEDVLEPGECCATCLQHGCTCEGYQYYDCVNVGFVNGKVPEGQSYFVDFGSTECSCPKGGGKISCQFMLCPELPPNCIDAVVPADGCPQCGRIGCLHEGQKYVAGHTFHMPPCKVCHCPNAGGELMCYQLPDCDTFSLNTASPGDAEDGEPERHYDDPYSYDQEASEGDNTQVESPKKYRSYSSHLEHESLSQEQGEDYDYLAASVAPSVPAPADPHTEGMAPPSTTLVPRDPAEARGATERGERRRLPRTTAPSLQQVTSKEAPATTRAPPQHTTATIETPQRLEELERKPQGSKERNEQERAPHSKMKKHARKEEPENSMYQGLKEVNFTEPSSARSSHERLEGNDFPKVKFSATTSPPVPLNEDGSQSSPKQSQTLFRYHPEEDGDPNSIHANPRLPEGSTKELIESCCGAGQQWAIDNGECTEIPVSGMDGDICRIAQQQCCVSALRESSCLAGMLAAREGDACGAEDSDPCAGSSYKQCCDCCSLGLRLRSEGRSCESNINLGYPCSHVMLSCCEGGDHFIHPELKRHPEPVPTVTPEKVSEREDHHEALSISSESELSNNLPGDDLDECLLYGGELCQHLCINTVGSYKCSCFPEFTLQEDGTSCSPDPDRGQMTRLEAEATIPPVASPSQPILVVSLQEEQDKCKDNGPCKHLCNIVEGDAVCSCMAGYTLMADGVSCEDLDECLTGAQTCSSGQLCENTLGSFSCVSHSGMCAEGFILNRHRKCVDINECVTERHTCQRREHCVNTMGSFRCLQELSCQPGHELKDGECVDIDECKRGTHSCKVNFVCQNTEGSFYCESKQRCMDGFLQDPEGNCVDINECTSLPEPCKPGFNCINTVGSYTCQRNMLSCSRGYHSNEEGTRCVDVDECQTGVHRCGEGQLCHNLPGGYRCDCKMGYQYDAFSRSCIDINECWNYPGRLCQHTCENTPGSYHCTCSSGFRLSYDGKHCEDVNECDNSPCSQECANVYGSYQCYCRQGFQLAEDGHSCKDIDECTQSAGILCTFRCVNVPGSYQCACPEQGYTMAANGRTCRDIDECAIGTHNCSAAETCYNIQGSFRCLSFECPSNYRKVSDMRCERISCFNYLECQNTPVRITYYQLNFQTNIVVPAHIFRIGPSPAYAGDNIVLTITKGNEEGFFSTRRLNSYTGIVYLQRQVKEPKDFLLDVEMKLWRQGTYTTFLAKIYIFITAHAY
SIO_010081: FBLN2
subclass of: SO_0000673
so part of: FBLN2
location: complement(join(1083786..1084143,1085547..1085670,1087831..1087959,1088933..1089049,1089648..1089773,1090447..1090575,1093852..1093995,1094304..1094441,1095509..1095643,1100956..1101096,1102457..1102558,1102988..1103104,1105057..1105263,1106064..1106250,1110469..1110598,1112713..1112824,1148741..1150070))
location: region:1083786-1150070:-1
so has part: feature:1148741-1150070:-1:exon
so has part: feature:1112713-1112824:-1:exon
so has part: feature:1110469-1110598:-1:exon
so has part: feature:1106064-1106250:-1:exon
so has part: feature:1105057-1105263:-1:exon
so has part: feature:1102988-1103104:-1:exon
so has part: feature:1102457-1102558:-1:exon
so has part: feature:1100956-1101096:-1:exon
so has part: feature:1095509-1095643:-1:exon
so has part: feature:1094304-1094441:-1:exon
so has part: feature:1093852-1093995:-1:exon
so has part: feature:1090447-1090575:-1:exon
so has part: feature:1089648-1089773:-1:exon
so has part: feature:1088933-1089049:-1:exon
so has part: feature:1087831-1087959:-1:exon
so has part: feature:1085547-1085670:-1:exon
so has part: feature:1083786-1084143:-1:exon

XP_021402429.1
type: Protein
SIO_000068: ncbiprotein

position:1083786:-1
position: 1083786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1150070:-1
position: 1150070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1148741-1150070:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1112713-1112824:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1110469-1110598:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1106064-1106250:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1105057-1105263:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1102988-1103104:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1102457-1102558:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1100956-1101096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1095509-1095643:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1094304-1094441:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1093852-1093995:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1090447-1090575:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1089648-1089773:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1088933-1089049:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1087831-1087959:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1085547-1085670:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1083786-1084143:-1:exon

HDAC11
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: HDAC11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1237739..1259478)
location: region:1237739-1259478:-1
so has part: feature:1237739-1259478:-1:exon
subclass of: SO_0000010

110478255
type: Gene
SIO_000068: ncbigene

position:1237739:-1
position: 1237739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1259478:-1
position: 1259478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1237739-1259478:-1:exon

HDAC11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: HDAC11
product: histone deacetylase 11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021544797.2
SIO_010081: HDAC11
subclass of: SO_0000673
so part of: HDAC11
location: complement(join(1237739..1239635,1243425..1243603,1246317..1246413,1248281..1248343,1249509..1249585,1249730..1249772,1251783..1251899,1255681..1255781,1257807..1257955,1259378..1259478))
location: region:1237739-1259478:-1
so has part: feature:1259378-1259478:-1:exon
so has part: feature:1257807-1257955:-1:exon
so has part: feature:1255681-1255781:-1:exon
so has part: feature:1251783-1251899:-1:exon
so has part: feature:1249730-1249772:-1:exon
so has part: feature:1249509-1249585:-1:exon
so has part: feature:1248281-1248343:-1:exon
so has part: feature:1246317-1246413:-1:exon
so has part: feature:1243425-1243603:-1:exon
so has part: feature:1237739-1239635:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1259378-1259478:-1:exon

position:1259378:-1
position: 1259378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1257807-1257955:-1:exon

position:1257807:-1
position: 1257807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1257955:-1
position: 1257955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1255681-1255781:-1:exon

position:1255681:-1
position: 1255681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1255781:-1
position: 1255781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1251783-1251899:-1:exon

position:1251783:-1
position: 1251783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1251899:-1
position: 1251899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1249730-1249772:-1:exon

position:1249730:-1
position: 1249730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1249772:-1
position: 1249772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1249509-1249585:-1:exon

position:1249509:-1
position: 1249509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1249585:-1
position: 1249585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1248281-1248343:-1:exon

position:1248281:-1
position: 1248281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1248343:-1
position: 1248343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1246317-1246413:-1:exon

position:1246317:-1
position: 1246317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1246413:-1
position: 1246413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1243425-1243603:-1:exon

position:1243425:-1
position: 1243425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1243603:-1
position: 1243603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1237739-1239635:-1:exon

position:1239635:-1
position: 1239635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HDAC11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: HDAC11
product: histone deacetylase 11, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021544799.2
SIO_010081: HDAC11
subclass of: SO_0000673
so part of: HDAC11
location: complement(join(1237739..1239646,1243425..1243603,1246317..1246413,1248281..1248343,1249509..1249585,1249730..1249772,1251783..1251899,1255681..1255781,1257807..1257955,1259378..1259478))
location: region:1237739-1259478:-1
so has part: feature:1259378-1259478:-1:exon
so has part: feature:1257807-1257955:-1:exon
so has part: feature:1255681-1255781:-1:exon
so has part: feature:1251783-1251899:-1:exon
so has part: feature:1249730-1249772:-1:exon
so has part: feature:1249509-1249585:-1:exon
so has part: feature:1248281-1248343:-1:exon
so has part: feature:1246317-1246413:-1:exon
so has part: feature:1243425-1243603:-1:exon
so has part: feature:1237739-1239646:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1259378-1259478:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1257807-1257955:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1255681-1255781:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1251783-1251899:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1249730-1249772:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1249509-1249585:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1248281-1248343:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1246317-1246413:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1243425-1243603:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1237739-1239646:-1:exon

position:1239646:-1
position: 1239646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HDAC11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: HDAC11
product: histone deacetylase 11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021544798.2
SIO_010081: HDAC11
subclass of: SO_0000673
so part of: HDAC11
location: complement(join(1237739..1239635,1243425..1243603,1246317..1246413,1248281..1248343,1249509..1249585,1249730..1249772,1251783..1251899,1255681..1255781,1256637..1256884,1257807..1257873))
location: region:1237739-1257873:-1
so has part: feature:1257807-1257873:-1:exon
so has part: feature:1256637-1256884:-1:exon
so has part: feature:1255681-1255781:-1:exon
so has part: feature:1251783-1251899:-1:exon
so has part: feature:1249730-1249772:-1:exon
so has part: feature:1249509-1249585:-1:exon
so has part: feature:1248281-1248343:-1:exon
so has part: feature:1246317-1246413:-1:exon
so has part: feature:1243425-1243603:-1:exon
so has part: feature:1237739-1239635:-1:exon

position:1257873:-1
position: 1257873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1257807-1257873:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1256637-1256884:-1:exon

position:1256637:-1
position: 1256637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1256884:-1
position: 1256884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1255681-1255781:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1251783-1251899:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1249730-1249772:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1249509-1249585:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1248281-1248343:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1246317-1246413:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1243425-1243603:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1237739-1239635:-1:exon

HDAC11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: HDAC11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 11 isoform X1
translation: MYEPGLAWARPGPGGAGAAPSLRGPAEAGMPHRTELYEDPPLGCWPIVYSPDYNITFMGLEKLHPFDAGKWGKVINFLKEEKLIADDLIVQAREATDEDLLVVHTRRYLNKLKWSFVVATITEIPPVAFLPNFIVQRKVLKPLRTQTGGTIMAGKLAVDRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVQGVSRATIIDLDAHQGNGHERDFMDDPRVYIMDAYNRYIYPGDGFAKRAIKRKVELEWGTEDTEYLQKVHTHVEGALNEFKPDIVVYNAGTDVLDGDPLGGLAISPQGIVKRDEVVFRAARSRGVPVLMVTSGGYQKRTARIIADSILNLHGLGLLGRERPAWAPGTPSLDPMPRDSAEDLSNLSLQ
SIO_010081: HDAC11
subclass of: SO_0000673
so part of: HDAC11
location: complement(join(1239393..1239635,1243425..1243603,1246317..1246413,1248281..1248343,1249509..1249585,1249730..1249772,1251783..1251899,1255681..1255781,1257807..1257955,1259378..1259466))
location: region:1239393-1259466:-1
so has part: feature:1259378-1259466:-1:exon
so has part: feature:1257807-1257955:-1:exon
so has part: feature:1255681-1255781:-1:exon
so has part: feature:1251783-1251899:-1:exon
so has part: feature:1249730-1249772:-1:exon
so has part: feature:1249509-1249585:-1:exon
so has part: feature:1248281-1248343:-1:exon
so has part: feature:1246317-1246413:-1:exon
so has part: feature:1243425-1243603:-1:exon
so has part: feature:1239393-1239635:-1:exon

XP_021400472.1
type: Protein
SIO_000068: ncbiprotein

position:1239393:-1
position: 1239393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1259466:-1
position: 1259466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1259378-1259466:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1257807-1257955:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1255681-1255781:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1251783-1251899:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1249730-1249772:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1249509-1249585:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1248281-1248343:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1246317-1246413:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1243425-1243603:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1239393-1239635:-1:exon

HDAC11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: HDAC11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 11 isoform X2
translation: MNCSSSLSQEKQELAKTNVAEEKLIADDLIVQAREATDEDLLVVHTRRYLNKLKWSFVVATITEIPPVAFLPNFIVQRKVLKPLRTQTGGTIMAGKLAVDRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVQGVSRATIIDLDAHQGNGHERDFMDDPRVYIMDAYNRYIYPGDGFAKRAIKRKVELEWGTEDTEYLQKVHTHVEGALNEFKPDIVVYNAGTDVLDGDPLGGLAISPQGIVKRDEVVFRAARSRGVPVLMVTSGGYQKRTARIIADSILNLHGLGLLGRERPAWAPGTPSLDPMPRDSAEDLSNLSLQ
SIO_010081: HDAC11
subclass of: SO_0000673
so part of: HDAC11
location: complement(join(1239393..1239635,1243425..1243603,1246317..1246413,1248281..1248343,1249509..1249585,1249730..1249772,1251783..1251899,1255681..1255781,1256637..1256697))
location: region:1239393-1256697:-1
so has part: feature:1256637-1256697:-1:exon
so has part: feature:1255681-1255781:-1:exon
so has part: feature:1251783-1251899:-1:exon
so has part: feature:1249730-1249772:-1:exon
so has part: feature:1249509-1249585:-1:exon
so has part: feature:1248281-1248343:-1:exon
so has part: feature:1246317-1246413:-1:exon
so has part: feature:1243425-1243603:-1:exon
so has part: feature:1239393-1239635:-1:exon

XP_021400473.1
type: Protein
SIO_000068: ncbiprotein

position:1256697:-1
position: 1256697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1256637-1256697:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1255681-1255781:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1251783-1251899:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1249730-1249772:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1249509-1249585:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1248281-1248343:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1246317-1246413:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1243425-1243603:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1239393-1239635:-1:exon

HDAC11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: HDAC11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 11 isoform X3
translation: MYEPGLAWARPGPGGAGAAPSLRGPAEAGMPHRTELYEDPPLGCWPIVYSPDYNITFMGLEKLHPFDAGKWGKVINFLKEEKLIADDLIVQAREATDEDLLVVHTRRYLNKLKWSFVVATITEIPPVAFLPNFIVQRKVLKPLRTQTGGTIMAGKLAVDRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVQGVSRATIIDLDAHQGNGHERDFMDDPRVYIMDAYNRYIYPGDGFAKRAIKRKVELEWGTEDTEYLQKVHTHVEGALNEFKPDIVVYNAGTDVLDGDPLGGLAISPQWPCRAL
SIO_010081: HDAC11
subclass of: SO_0000673
so part of: HDAC11
location: complement(join(1239626..1239646,1243425..1243603,1246317..1246413,1248281..1248343,1249509..1249585,1249730..1249772,1251783..1251899,1255681..1255781,1257807..1257955,1259378..1259466))
location: region:1239626-1259466:-1
so has part: feature:1259378-1259466:-1:exon
so has part: feature:1257807-1257955:-1:exon
so has part: feature:1255681-1255781:-1:exon
so has part: feature:1251783-1251899:-1:exon
so has part: feature:1249730-1249772:-1:exon
so has part: feature:1249509-1249585:-1:exon
so has part: feature:1248281-1248343:-1:exon
so has part: feature:1246317-1246413:-1:exon
so has part: feature:1243425-1243603:-1:exon
so has part: feature:1239626-1239646:-1:exon

XP_021400474.1
type: Protein
SIO_000068: ncbiprotein

position:1239626:-1
position: 1239626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1259378-1259466:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1257807-1257955:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1255681-1255781:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1251783-1251899:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1249730-1249772:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1249509-1249585:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1248281-1248343:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1246317-1246413:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1243425-1243603:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1239626-1239646:-1:exon

LOC110478256
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110478256
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1259430..1268370
location: region:1259430-1268370:1
so has part: feature:1259430-1268370:1:exon
subclass of: SO_0000011

110478256
type: Gene
SIO_000068: ncbigene

position:1259430:1
position: 1259430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1268370:1
position: 1268370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1259430-1268370:1:exon

LOC110478256
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110478256
product: uncharacterized LOC110478256
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002466730.2
SIO_010081: LOC110478256
subclass of: SO_0000673
so part of: LOC110478256
location: join(1259430..1259603,1267936..1268067,1268253..1268370)
location: region:1259430-1268370:1
so has part: feature:1259430-1259603:1:exon
so has part: feature:1267936-1268067:1:exon
so has part: feature:1268253-1268370:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1259430-1259603:1:exon

position:1259603:1
position: 1259603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1267936-1268067:1:exon

position:1267936:1
position: 1267936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1268067:1
position: 1268067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1268253-1268370:1:exon

position:1268253:1
position: 1268253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NUP210
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: NUP210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1283357..1335574
location: region:1283357-1335574:1
so has part: feature:1283357-1335574:1:exon
subclass of: SO_0000010

110478252
type: Gene
SIO_000068: ncbigene

position:1283357:1
position: 1283357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1335574:1
position: 1335574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1283357-1335574:1:exon

NUP210
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: NUP210
product: nucleoporin 210
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031505978.1
SIO_010081: NUP210
subclass of: SO_0000673
so part of: NUP210
location: join(1283357..1283527,1290749..1290909,1291689..1291820,1292641..1292737,1294251..1294401,1294707..1294839,1295564..1295722,1296181..1296249,1296544..1296654,1303330..1303379,1313432..1313624,1313895..1314001,1316220..1316324,1316455..1316556,1319185..1319313,1319980..1320107,1320659..1320794,1321092..1321154,1322079..1322258,1323577..1323657,1323885..1324016,1324202..1324360,1324924..1325015,1325656..1325830,1328409..1328584,1329536..1329753,1330226..1330362,1331044..1331167,1332063..1332209,1333338..1333595,1333660..1333667,1334349..1334556,1334692..1334787,1334912..1334995,1335460..1335574)
location: region:1283357-1335574:1
so has part: feature:1283357-1283527:1:exon
so has part: feature:1290749-1290909:1:exon
so has part: feature:1291689-1291820:1:exon
so has part: feature:1292641-1292737:1:exon
so has part: feature:1294251-1294401:1:exon
so has part: feature:1294707-1294839:1:exon
so has part: feature:1295564-1295722:1:exon
so has part: feature:1296181-1296249:1:exon
so has part: feature:1296544-1296654:1:exon
so has part: feature:1303330-1303379:1:exon
so has part: feature:1313432-1313624:1:exon
so has part: feature:1313895-1314001:1:exon
so has part: feature:1316220-1316324:1:exon
so has part: feature:1316455-1316556:1:exon
so has part: feature:1319185-1319313:1:exon
so has part: feature:1319980-1320107:1:exon
so has part: feature:1320659-1320794:1:exon
so has part: feature:1321092-1321154:1:exon
so has part: feature:1322079-1322258:1:exon
so has part: feature:1323577-1323657:1:exon
so has part: feature:1323885-1324016:1:exon
so has part: feature:1324202-1324360:1:exon
so has part: feature:1324924-1325015:1:exon
so has part: feature:1325656-1325830:1:exon
so has part: feature:1328409-1328584:1:exon
so has part: feature:1329536-1329753:1:exon
so has part: feature:1330226-1330362:1:exon
so has part: feature:1331044-1331167:1:exon
so has part: feature:1332063-1332209:1:exon
so has part: feature:1333338-1333595:1:exon
so has part: feature:1333660-1333667:1:exon
so has part: feature:1334349-1334556:1:exon
so has part: feature:1334692-1334787:1:exon
so has part: feature:1334912-1334995:1:exon
so has part: feature:1335460-1335574:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1283357-1283527:1:exon

position:1283527:1
position: 1283527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1290749-1290909:1:exon

position:1290749:1
position: 1290749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1290909:1
position: 1290909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1291689-1291820:1:exon

position:1291689:1
position: 1291689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1291820:1
position: 1291820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1292641-1292737:1:exon

position:1292641:1
position: 1292641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1292737:1
position: 1292737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1294251-1294401:1:exon

position:1294251:1
position: 1294251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1294401:1
position: 1294401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1294707-1294839:1:exon

position:1294707:1
position: 1294707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1294839:1
position: 1294839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1295564-1295722:1:exon

position:1295564:1
position: 1295564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1295722:1
position: 1295722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1296181-1296249:1:exon

position:1296181:1
position: 1296181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1296249:1
position: 1296249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1296544-1296654:1:exon

position:1296544:1
position: 1296544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1296654:1
position: 1296654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1303330-1303379:1:exon

position:1303330:1
position: 1303330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1303379:1
position: 1303379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1313432-1313624:1:exon

position:1313432:1
position: 1313432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1313624:1
position: 1313624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1313895-1314001:1:exon

position:1313895:1
position: 1313895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1314001:1
position: 1314001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1316220-1316324:1:exon

position:1316220:1
position: 1316220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1316324:1
position: 1316324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1316455-1316556:1:exon

position:1316455:1
position: 1316455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1316556:1
position: 1316556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1319185-1319313:1:exon

position:1319185:1
position: 1319185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1319313:1
position: 1319313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1319980-1320107:1:exon

position:1319980:1
position: 1319980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1320107:1
position: 1320107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1320659-1320794:1:exon

position:1320659:1
position: 1320659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1320794:1
position: 1320794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1321092-1321154:1:exon

position:1321092:1
position: 1321092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1321154:1
position: 1321154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1322079-1322258:1:exon

position:1322079:1
position: 1322079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1322258:1
position: 1322258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1323577-1323657:1:exon

position:1323577:1
position: 1323577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1323657:1
position: 1323657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1323885-1324016:1:exon

position:1323885:1
position: 1323885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1324016:1
position: 1324016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1324202-1324360:1:exon

position:1324202:1
position: 1324202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1324360:1
position: 1324360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1324924-1325015:1:exon

position:1324924:1
position: 1324924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1325015:1
position: 1325015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1325656-1325830:1:exon

position:1325656:1
position: 1325656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1325830:1
position: 1325830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1328409-1328584:1:exon

position:1328409:1
position: 1328409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1328584:1
position: 1328584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1329536-1329753:1:exon

position:1329536:1
position: 1329536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1329753:1
position: 1329753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1330226-1330362:1:exon

position:1330226:1
position: 1330226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1330362:1
position: 1330362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1331044-1331167:1:exon

position:1331044:1
position: 1331044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1331167:1
position: 1331167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1332063-1332209:1:exon

position:1332063:1
position: 1332063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1332209:1
position: 1332209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1333338-1333595:1:exon

position:1333338:1
position: 1333338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1333595:1
position: 1333595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1333660-1333667:1:exon

position:1333660:1
position: 1333660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1333667:1
position: 1333667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1334349-1334556:1:exon

position:1334349:1
position: 1334349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1334556:1
position: 1334556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1334692-1334787:1:exon

position:1334692:1
position: 1334692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1334787:1
position: 1334787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1334912-1334995:1:exon

position:1334912:1
position: 1334912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1334995:1
position: 1334995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1335460-1335574:1:exon

position:1335460:1
position: 1335460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NUP210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: NUP210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear pore membrane glycoprotein 210
translation: MAPRAPGALLLLLLLLHLAASSKLNTPKVLLPFTRGARVNFTLEASEGCYLWSSTRPEVASIEPLEVASIEPLGPAGCLCSRRALVQARSSQPTRLTTIISAEDTLTGEVLRCDAIVDLIHGIQVVSTTRELYLEDSPLELNIHALDSEGNTFSTLAGLVFDWTVVKDPEADCFSDSHNTLRIVKFLESTYIPPSYILEMEKVSKQGDIILVSGMKTGSCKLKARLQESIYKNVEPAEIRLLILENIFLNPTYDIYLLVGTSIQYRVQKLRQRKITEIAMPSEQYELQLQNNILHPKGDPSQPVAKLDQATSTVTALQQGQTKLILVHKSIRMQGVSRLPSSTVFVVAPAYLGFTVHPGDRWVLETGRFYEITVDVYDKSSNKVYLSDVRAAFCVNSSSEFCLLTSVPVSNYHNPVLELAAYDQQGRKFDNFSSLSIVWESTNKAIARIEAELPMELTLKEESNGQKKMHGLQTVVADREFGTAAISATATGFQQPHLKAARAQTPHEAVLPGPATIELVLVEDVKVSPTGLSIYNHPDIQAELLIQQGSGYFFINTSVPNIVRVTHEETQGIALVQPLLPGSVTVMIHDLCLAFPAPAEAEIHVSDIQELYVRVVDKVEIGKTVKAYVRVLDDSKKPFLAKYFPVMDLSLKAASQLVSLVPLREAPDDHTAAFLVRGMSIGQTSLMATVADRRGQRINSAPQQIEVFPPFRLLPRKVTLIIGAMIQISAEGGPQPLSNIIFSIDNEHIAAVNSSGLVRGVAIGSGVVTGVLQAVDAETEKLVAVSQDKVEVEVVQLTAVRIRAPITRMKAGTQMPVYVTGITSAQTPFSFGSAVPGLTFHWSVSKRDTLDVRTRHSEAAVQLPANYNFAVDVYGRVKGRTGLKVVVKVLDAAANQFYNMARELSDEIQIQVFEKLHLVTPEAEAEQILMSPNSFIKLETNRDQVASLSYRVLDGPDKVPVVKIDERGFLVSGSVIGSATIEVISQELFGINQTIIAAVKVCPISYLRISMRPVLLTQSKEALQALPLGVTLTFTVHFQDNSGDTFHSHNAVLSFATNRDDFVQIAKGAANNTFVIRTVSVGLTLLRVWDAEHSGTADYIPLPVQHAIFPELPDVVVGDVLCLRTLLTAPEGLPGMWSSSSSALLLVDSKTGVALARDSGVVTVYYEIPGLLNTYREILINAPQRTTAMYVSGVQAGLQGVAASKVIVSIGETNKNLKGECSPAQIEAIAELQPQSIISCHLDFNSDAFDFPAQDIFVAEPGFDAVSGHYRCSIRMHSPRAKQLKQLSRSRAALWVTAAVRGSAGAGQQQQGTEVPFSRWFYAEQAEMLLSNQDGSSVLRIFGAREILDSLEVKCESPAVKVLEKEKSYGLPSYVVYTVSLADPRVPSQGSLSTSVTVSSPMTDQSITIPVTVIYLTDRTTAPVRYEATLFQQFVESYQVMIFTLFALIAGTAVMIIAYHAFFSPNERHNQPVFHPRTSLQHTPNSSIGSPAHSFSSQASSRQSSPSARLWSTGYASQ
SIO_010081: NUP210
subclass of: SO_0000673
so part of: NUP210
location: join(1283373..1283527,1290749..1290909,1291689..1291820,1292641..1292737,1294251..1294401,1294707..1294839,1295564..1295722,1296181..1296249,1296544..1296654,1303330..1303379,1313432..1313624,1313895..1314001,1316220..1316324,1316455..1316556,1319185..1319313,1319980..1320107,1320659..1320794,1321092..1321154,1322079..1322258,1323577..1323657,1323885..1324016,1324202..1324360,1324924..1325015,1325656..1325830,1328409..1328584,1329536..1329753,1330226..1330362,1331044..1331167,1332063..1332209,1333338..1333595,1333660..1333667,1334349..1334556,1334692..1334787,1334912..1334995,1335460..1335560)
location: region:1283373-1335560:1
so has part: feature:1283373-1283527:1:exon
so has part: feature:1290749-1290909:1:exon
so has part: feature:1291689-1291820:1:exon
so has part: feature:1292641-1292737:1:exon
so has part: feature:1294251-1294401:1:exon
so has part: feature:1294707-1294839:1:exon
so has part: feature:1295564-1295722:1:exon
so has part: feature:1296181-1296249:1:exon
so has part: feature:1296544-1296654:1:exon
so has part: feature:1303330-1303379:1:exon
so has part: feature:1313432-1313624:1:exon
so has part: feature:1313895-1314001:1:exon
so has part: feature:1316220-1316324:1:exon
so has part: feature:1316455-1316556:1:exon
so has part: feature:1319185-1319313:1:exon
so has part: feature:1319980-1320107:1:exon
so has part: feature:1320659-1320794:1:exon
so has part: feature:1321092-1321154:1:exon
so has part: feature:1322079-1322258:1:exon
so has part: feature:1323577-1323657:1:exon
so has part: feature:1323885-1324016:1:exon
so has part: feature:1324202-1324360:1:exon
so has part: feature:1324924-1325015:1:exon
so has part: feature:1325656-1325830:1:exon
so has part: feature:1328409-1328584:1:exon
so has part: feature:1329536-1329753:1:exon
so has part: feature:1330226-1330362:1:exon
so has part: feature:1331044-1331167:1:exon
so has part: feature:1332063-1332209:1:exon
so has part: feature:1333338-1333595:1:exon
so has part: feature:1333660-1333667:1:exon
so has part: feature:1334349-1334556:1:exon
so has part: feature:1334692-1334787:1:exon
so has part: feature:1334912-1334995:1:exon
so has part: feature:1335460-1335560:1:exon

XP_031361838.1
type: Protein
SIO_000068: ncbiprotein

position:1283373:1
position: 1283373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1335560:1
position: 1335560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1283373-1283527:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1290749-1290909:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1291689-1291820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1292641-1292737:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1294251-1294401:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294707-1294839:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295564-1295722:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1296181-1296249:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1296544-1296654:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1303330-1303379:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1313432-1313624:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1313895-1314001:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1316220-1316324:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1316455-1316556:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1319185-1319313:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1319980-1320107:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1320659-1320794:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1321092-1321154:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1322079-1322258:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1323577-1323657:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1323885-1324016:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1324202-1324360:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1324924-1325015:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1325656-1325830:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1328409-1328584:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1329536-1329753:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1330226-1330362:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1331044-1331167:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1332063-1332209:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1333338-1333595:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1333660-1333667:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1334349-1334556:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1334692-1334787:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1334912-1334995:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1335460-1335560:1:exon

IQSEC1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: IQSEC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1379739..1659239
location: region:1379739-1659239:1
so has part: feature:1379739-1659239:1:exon
subclass of: SO_0000010

110478253
type: Gene
SIO_000068: ncbigene

position:1379739:1
position: 1379739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1659239:1
position: 1659239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1379739-1659239:1:exon

IQSEC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: IQSEC1
product: IQ motif and Sec7 domain ArfGEF 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 47 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_031505974.1
SIO_010081: IQSEC1
subclass of: SO_0000673
so part of: IQSEC1
location: join(1379739..1379839,1380732..1381059,1435130..1435159,1523847..1523891,1619798..1620077,1620635..1621899,1635090..1635251,1636478..1636600,1637348..1637514,1639071..1639210,1640473..1640502,1641554..1641679,1642977..1643076,1645959..1646120,1646848..1647024,1653220..1653269,1654667..1659239)
location: region:1379739-1659239:1
so has part: feature:1379739-1379839:1:exon
so has part: feature:1380732-1381059:1:exon
so has part: feature:1435130-1435159:1:exon
so has part: feature:1523847-1523891:1:exon
so has part: feature:1619798-1620077:1:exon
so has part: feature:1620635-1621899:1:exon
so has part: feature:1635090-1635251:1:exon
so has part: feature:1636478-1636600:1:exon
so has part: feature:1637348-1637514:1:exon
so has part: feature:1639071-1639210:1:exon
so has part: feature:1640473-1640502:1:exon
so has part: feature:1641554-1641679:1:exon
so has part: feature:1642977-1643076:1:exon
so has part: feature:1645959-1646120:1:exon
so has part: feature:1646848-1647024:1:exon
so has part: feature:1653220-1653269:1:exon
so has part: feature:1654667-1659239:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1379739-1379839:1:exon

position:1379839:1
position: 1379839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1380732-1381059:1:exon

position:1380732:1
position: 1380732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1381059:1
position: 1381059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1435130-1435159:1:exon

position:1435130:1
position: 1435130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1435159:1
position: 1435159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1523847-1523891:1:exon

position:1523847:1
position: 1523847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1523891:1
position: 1523891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1619798-1620077:1:exon

position:1619798:1
position: 1619798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1620077:1
position: 1620077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1620635-1621899:1:exon

position:1620635:1
position: 1620635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1621899:1
position: 1621899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1635090-1635251:1:exon

position:1635090:1
position: 1635090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1635251:1
position: 1635251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1636478-1636600:1:exon

position:1636478:1
position: 1636478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1636600:1
position: 1636600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1637348-1637514:1:exon

position:1637348:1
position: 1637348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1637514:1
position: 1637514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1639071-1639210:1:exon

position:1639071:1
position: 1639071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1639210:1
position: 1639210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1640473-1640502:1:exon

position:1640473:1
position: 1640473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1640502:1
position: 1640502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1641554-1641679:1:exon

position:1641554:1
position: 1641554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1641679:1
position: 1641679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1642977-1643076:1:exon

position:1642977:1
position: 1642977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1643076:1
position: 1643076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1645959-1646120:1:exon

position:1645959:1
position: 1645959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1646120:1
position: 1646120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1646848-1647024:1:exon

position:1646848:1
position: 1646848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1647024:1
position: 1647024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1653220-1653269:1:exon

position:1653220:1
position: 1653220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1653269:1
position: 1653269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1654667-1659239:1:exon

position:1654667:1
position: 1654667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IQSEC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: IQSEC1
product: IQ motif and Sec7 domain ArfGEF 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 47 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021544791.2
SIO_010081: IQSEC1
subclass of: SO_0000673
so part of: IQSEC1
location: join(1380639..1381059,1435130..1435159,1523847..1523891,1619798..1620077,1620635..1621899,1635090..1635251,1636478..1636600,1637348..1637514,1639071..1639210,1640473..1640502,1641554..1641679,1642977..1643076,1645959..1646120,1646848..1647024,1653220..1653269,1654667..1659239)
location: region:1380639-1659239:1
so has part: feature:1380639-1381059:1:exon
so has part: feature:1435130-1435159:1:exon
so has part: feature:1523847-1523891:1:exon
so has part: feature:1619798-1620077:1:exon
so has part: feature:1620635-1621899:1:exon
so has part: feature:1635090-1635251:1:exon
so has part: feature:1636478-1636600:1:exon
so has part: feature:1637348-1637514:1:exon
so has part: feature:1639071-1639210:1:exon
so has part: feature:1640473-1640502:1:exon
so has part: feature:1641554-1641679:1:exon
so has part: feature:1642977-1643076:1:exon
so has part: feature:1645959-1646120:1:exon
so has part: feature:1646848-1647024:1:exon
so has part: feature:1653220-1653269:1:exon
so has part: feature:1654667-1659239:1:exon

position:1380639:1
position: 1380639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1380639-1381059:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1435130-1435159:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1523847-1523891:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1619798-1620077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1620635-1621899:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1635090-1635251:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1636478-1636600:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1637348-1637514:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1639071-1639210:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1640473-1640502:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1641554-1641679:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1642977-1643076:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1645959-1646120:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1646848-1647024:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1653220-1653269:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1654667-1659239:1:exon

IQSEC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: IQSEC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IQ motif and SEC7 domain-containing protein 1 isoform X2
translation: MESPSENPSKAAEYLKELNKIIETQQELLEKQKRRIDELEQQVAKLYHENACLQDEHHRHLATCRLQQGVPPAPPGMLSATQENARHEKSEGDSSRSLRTSLETGSSVSTDPLSVEGEAPSSETGTSLDSPSGYPQGPITHSSALSPEHYEHPYGLYSIAPGQQRARRPKLQHSTSILRKQAEEEAIKRSRSLSESYELSSDLQDKQVEMLERKYGGRLITRHAARTIQTAFRQYQMNKNFERLRSSMSENRMSRRIVLSNMRMQFSFEGPEKVHSSYFEGKQVSVTNDGSKLGSLVPSECNELGETATMKSPAASTDFSDAITELEDAFSRQVKSLAESIDDALNCRSLHSDEIQSVEQVRSREMERESCAPSKPAIHNVDHRKLDEMTASYSDVTLYIDEEELSPPLPLSQSVDRPSSTESDLRLRSVNSSQEYWSMTHKDDKIDTDTSCRSTPSLECQEQRMRMDHLPLLTIEPPSDSSVDLSDRSERGSLKRQNAYDRGITSQQGSPKHIPHSIAAKIITREEQEARHRARPIDSHLAINGTANRQSKSESDYSDGDNDSINSTSNSNDTINCSSESSSRDSLREQTLSKQTYHKETRNSWDSPAFSNDVIRKRHYRIGLNLFNKKPEKGVQYLIERGFVPDTPVGVAHFLLQRKGLSRQMIGEFLGNRQKQFNRDVLDCVVDEMDFSTMELDEALRKFQAHIRVQGEAQKVERLIEAFSQRYCICNPGVVRQFRNPDTIFILAFAIILLNTDMYSPNVKPERKMKLEDFIKNLRGVDDGEDIPREMLIGIYERIRKRELKTNEDHVSQVQKVEKLIVGKKPIGSLHHGLGCVLSLPHRRLVCYCRLFEVPDPNKPQKLGLHQREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVLLFENQYYPNGIRLTSAVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEVQEMEKHRIESELEKQKGVVRPSMSQCSSLKKDSGNGTLPRACLDDSYAGGEGLKRSALSSSLRDLSEAGKRGRRSSAGSLDSNMEGSIISSPHMRRRATSTRECPSRPHQTMPNSSSLLGSLFGSKRGKPPSQSLAAAQPPHHAEGAAAAPHPHHAQFCHQNPPPYHHHHHYHPPPHLHPHPHQYHGHGHGHGHAPYLPHAPHHAPHHGPHHHGPPPPPAASSTKPKHSGISTIV
SIO_010081: IQSEC1
subclass of: SO_0000673
so part of: IQSEC1
location: join(1380794..1381059,1435130..1435159,1523847..1523891,1619798..1620077,1620635..1621899,1635090..1635251,1636478..1636600,1637348..1637514,1639071..1639210,1640473..1640502,1641554..1641679,1642977..1643076,1645959..1646120,1646848..1647024,1653220..1653269,1654667..1655119)
location: region:1380794-1655119:1
so has part: feature:1380794-1381059:1:exon
so has part: feature:1435130-1435159:1:exon
so has part: feature:1523847-1523891:1:exon
so has part: feature:1619798-1620077:1:exon
so has part: feature:1620635-1621899:1:exon
so has part: feature:1635090-1635251:1:exon
so has part: feature:1636478-1636600:1:exon
so has part: feature:1637348-1637514:1:exon
so has part: feature:1639071-1639210:1:exon
so has part: feature:1640473-1640502:1:exon
so has part: feature:1641554-1641679:1:exon
so has part: feature:1642977-1643076:1:exon
so has part: feature:1645959-1646120:1:exon
so has part: feature:1646848-1647024:1:exon
so has part: feature:1653220-1653269:1:exon
so has part: feature:1654667-1655119:1:exon

XP_021400466.1
type: Protein
SIO_000068: ncbiprotein

position:1380794:1
position: 1380794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1655119:1
position: 1655119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1380794-1381059:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1435130-1435159:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1523847-1523891:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1619798-1620077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1620635-1621899:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1635090-1635251:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1636478-1636600:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1637348-1637514:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1639071-1639210:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1640473-1640502:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1641554-1641679:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1642977-1643076:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1645959-1646120:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1646848-1647024:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1653220-1653269:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1654667-1655119:1:exon

IQSEC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: IQSEC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IQ motif and SEC7 domain-containing protein 1 isoform X2
translation: MESPSENPSKAAEYLKELNKIIETQQELLEKQKRRIDELEQQVAKLYHENACLQDEHHRHLATCRLQQGVPPAPPGMLSATQENARHEKSEGDSSRSLRTSLETGSSVSTDPLSVEGEAPSSETGTSLDSPSGYPQGPITHSSALSPEHYEHPYGLYSIAPGQQRARRPKLQHSTSILRKQAEEEAIKRSRSLSESYELSSDLQDKQVEMLERKYGGRLITRHAARTIQTAFRQYQMNKNFERLRSSMSENRMSRRIVLSNMRMQFSFEGPEKVHSSYFEGKQVSVTNDGSKLGSLVPSECNELGETATMKSPAASTDFSDAITELEDAFSRQVKSLAESIDDALNCRSLHSDEIQSVEQVRSREMERESCAPSKPAIHNVDHRKLDEMTASYSDVTLYIDEEELSPPLPLSQSVDRPSSTESDLRLRSVNSSQEYWSMTHKDDKIDTDTSCRSTPSLECQEQRMRMDHLPLLTIEPPSDSSVDLSDRSERGSLKRQNAYDRGITSQQGSPKHIPHSIAAKIITREEQEARHRARPIDSHLAINGTANRQSKSESDYSDGDNDSINSTSNSNDTINCSSESSSRDSLREQTLSKQTYHKETRNSWDSPAFSNDVIRKRHYRIGLNLFNKKPEKGVQYLIERGFVPDTPVGVAHFLLQRKGLSRQMIGEFLGNRQKQFNRDVLDCVVDEMDFSTMELDEALRKFQAHIRVQGEAQKVERLIEAFSQRYCICNPGVVRQFRNPDTIFILAFAIILLNTDMYSPNVKPERKMKLEDFIKNLRGVDDGEDIPREMLIGIYERIRKRELKTNEDHVSQVQKVEKLIVGKKPIGSLHHGLGCVLSLPHRRLVCYCRLFEVPDPNKPQKLGLHQREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVLLFENQYYPNGIRLTSAVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEVQEMEKHRIESELEKQKGVVRPSMSQCSSLKKDSGNGTLPRACLDDSYAGGEGLKRSALSSSLRDLSEAGKRGRRSSAGSLDSNMEGSIISSPHMRRRATSTRECPSRPHQTMPNSSSLLGSLFGSKRGKPPSQSLAAAQPPHHAEGAAAAPHPHHAQFCHQNPPPYHHHHHYHPPPHLHPHPHQYHGHGHGHGHAPYLPHAPHHAPHHGPHHHGPPPPPAASSTKPKHSGISTIV
SIO_010081: IQSEC1
subclass of: SO_0000673
so part of: IQSEC1
location: join(1380794..1381059,1435130..1435159,1523847..1523891,1619798..1620077,1620635..1621899,1635090..1635251,1636478..1636600,1637348..1637514,1639071..1639210,1640473..1640502,1641554..1641679,1642977..1643076,1645959..1646120,1646848..1647024,1653220..1653269,1654667..1655119)
location: region:1380794-1655119:1
so has part: feature:1380794-1381059:1:exon
so has part: feature:1435130-1435159:1:exon
so has part: feature:1523847-1523891:1:exon
so has part: feature:1619798-1620077:1:exon
so has part: feature:1620635-1621899:1:exon
so has part: feature:1635090-1635251:1:exon
so has part: feature:1636478-1636600:1:exon
so has part: feature:1637348-1637514:1:exon
so has part: feature:1639071-1639210:1:exon
so has part: feature:1640473-1640502:1:exon
so has part: feature:1641554-1641679:1:exon
so has part: feature:1642977-1643076:1:exon
so has part: feature:1645959-1646120:1:exon
so has part: feature:1646848-1647024:1:exon
so has part: feature:1653220-1653269:1:exon
so has part: feature:1654667-1655119:1:exon

XP_031361834.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1380794-1381059:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1435130-1435159:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1523847-1523891:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1619798-1620077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1620635-1621899:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1635090-1635251:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1636478-1636600:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1637348-1637514:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1639071-1639210:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1640473-1640502:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1641554-1641679:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1642977-1643076:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1645959-1646120:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1646848-1647024:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1653220-1653269:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1654667-1655119:1:exon

IQSEC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: IQSEC1
product: IQ motif and Sec7 domain ArfGEF 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 47 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021544790.2
SIO_010081: IQSEC1
subclass of: SO_0000673
so part of: IQSEC1
location: join(1491098..1491623,1523847..1523891,1619798..1620077,1620635..1621899,1635090..1635251,1636478..1636600,1637348..1637514,1639071..1639210,1640473..1640502,1641554..1641679,1642977..1643076,1645959..1646120,1646848..1647024,1653220..1653269,1654667..1659239)
location: region:1491098-1659239:1
so has part: feature:1491098-1491623:1:exon
so has part: feature:1523847-1523891:1:exon
so has part: feature:1619798-1620077:1:exon
so has part: feature:1620635-1621899:1:exon
so has part: feature:1635090-1635251:1:exon
so has part: feature:1636478-1636600:1:exon
so has part: feature:1637348-1637514:1:exon
so has part: feature:1639071-1639210:1:exon
so has part: feature:1640473-1640502:1:exon
so has part: feature:1641554-1641679:1:exon
so has part: feature:1642977-1643076:1:exon
so has part: feature:1645959-1646120:1:exon
so has part: feature:1646848-1647024:1:exon
so has part: feature:1653220-1653269:1:exon
so has part: feature:1654667-1659239:1:exon

position:1491098:1
position: 1491098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1491098-1491623:1:exon

position:1491623:1
position: 1491623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1523847-1523891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1619798-1620077:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1620635-1621899:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1635090-1635251:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1636478-1636600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1637348-1637514:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1639071-1639210:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1640473-1640502:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1641554-1641679:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1642977-1643076:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1645959-1646120:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1646848-1647024:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1653220-1653269:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1654667-1659239:1:exon

IQSEC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: IQSEC1
product: IQ motif and Sec7 domain ArfGEF 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 47 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021544792.2
SIO_010081: IQSEC1
subclass of: SO_0000673
so part of: IQSEC1
location: join(1491098..1491623,1619798..1620077,1620635..1621899,1635090..1635251,1636478..1636600,1637348..1637514,1639071..1639210,1640473..1640502,1641554..1641679,1642977..1643076,1645959..1646120,1646848..1647024,1653220..1653269,1654667..1659239)
location: region:1491098-1659239:1
so has part: feature:1491098-1491623:1:exon
so has part: feature:1619798-1620077:1:exon
so has part: feature:1620635-1621899:1:exon
so has part: feature:1635090-1635251:1:exon
so has part: feature:1636478-1636600:1:exon
so has part: feature:1637348-1637514:1:exon
so has part: feature:1639071-1639210:1:exon
so has part: feature:1640473-1640502:1:exon
so has part: feature:1641554-1641679:1:exon
so has part: feature:1642977-1643076:1:exon
so has part: feature:1645959-1646120:1:exon
so has part: feature:1646848-1647024:1:exon
so has part: feature:1653220-1653269:1:exon
so has part: feature:1654667-1659239:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1491098-1491623:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1619798-1620077:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1620635-1621899:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1635090-1635251:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1636478-1636600:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1637348-1637514:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1639071-1639210:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1640473-1640502:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1641554-1641679:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1642977-1643076:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1645959-1646120:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1646848-1647024:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1653220-1653269:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1654667-1659239:1:exon

IQSEC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: IQSEC1
product: IQ motif and Sec7 domain ArfGEF 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 37 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031505975.1
SIO_010081: IQSEC1
subclass of: SO_0000673
so part of: IQSEC1
location: join(1491103..1491623,1523847..1523891,1619798..1620077,1620635..1621899,1635090..1635251,1636478..1636600,1637348..1637514,1639071..1639210,1640473..1640502,1641554..1641679,1642977..1643076,1645959..1646120,1646848..1647024,1653220..1653269,1656624..1659239)
location: region:1491103-1659239:1
so has part: feature:1491103-1491623:1:exon
so has part: feature:1523847-1523891:1:exon
so has part: feature:1619798-1620077:1:exon
so has part: feature:1620635-1621899:1:exon
so has part: feature:1635090-1635251:1:exon
so has part: feature:1636478-1636600:1:exon
so has part: feature:1637348-1637514:1:exon
so has part: feature:1639071-1639210:1:exon
so has part: feature:1640473-1640502:1:exon
so has part: feature:1641554-1641679:1:exon
so has part: feature:1642977-1643076:1:exon
so has part: feature:1645959-1646120:1:exon
so has part: feature:1646848-1647024:1:exon
so has part: feature:1653220-1653269:1:exon
so has part: feature:1656624-1659239:1:exon

position:1491103:1
position: 1491103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1491103-1491623:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1523847-1523891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1619798-1620077:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1620635-1621899:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1635090-1635251:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1636478-1636600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1637348-1637514:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1639071-1639210:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1640473-1640502:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1641554-1641679:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1642977-1643076:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1645959-1646120:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1646848-1647024:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1653220-1653269:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1656624-1659239:1:exon

position:1656624:1
position: 1656624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IQSEC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: IQSEC1
product: IQ motif and Sec7 domain ArfGEF 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031505976.1
SIO_010081: IQSEC1
subclass of: SO_0000673
so part of: IQSEC1
location: join(1491105..1491623,1523847..1523891,1619798..1620077,1620635..1621899,1635090..1635251,1636478..1636600,1637348..1637514,1639071..1639210,1640473..1640502,1641554..1641679,1642977..1643076,1645959..1646120,1646848..1647024,1654667..1654787)
location: region:1491105-1654787:1
so has part: feature:1491105-1491623:1:exon
so has part: feature:1523847-1523891:1:exon
so has part: feature:1619798-1620077:1:exon
so has part: feature:1620635-1621899:1:exon
so has part: feature:1635090-1635251:1:exon
so has part: feature:1636478-1636600:1:exon
so has part: feature:1637348-1637514:1:exon
so has part: feature:1639071-1639210:1:exon
so has part: feature:1640473-1640502:1:exon
so has part: feature:1641554-1641679:1:exon
so has part: feature:1642977-1643076:1:exon
so has part: feature:1645959-1646120:1:exon
so has part: feature:1646848-1647024:1:exon
so has part: feature:1654667-1654787:1:exon

position:1491105:1
position: 1491105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1654787:1
position: 1654787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1491105-1491623:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1523847-1523891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1619798-1620077:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1620635-1621899:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1635090-1635251:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1636478-1636600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1637348-1637514:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1639071-1639210:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1640473-1640502:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1641554-1641679:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1642977-1643076:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1645959-1646120:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1646848-1647024:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1654667-1654787:1:exon

IQSEC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: IQSEC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IQ motif and SEC7 domain-containing protein 1 isoform X6
translation: MLATPPLWEKPFGFAKYNPVEPLGLSDAVFDAGYITSLLIGDVPPWLSLNEHAKALNVIFFFFTLFFFLRKSFSTSDYVKENINSKATPHSRMACRRCYLTSLETGSSVSTDPLSVEGEAPSSETGTSLDSPSGYPQGPITHSSALSPEHYEHPYGLYSIAPGQQRARRPKLQHSTSILRKQAEEEAIKRSRSLSESYELSSDLQDKQVEMLERKYGGRLITRHAARTIQTAFRQYQMNKNFERLRSSMSENRMSRRIVLSNMRMQFSFEGPEKVHSSYFEGKQVSVTNDGSKLGSLVPSECNELGETATMKSPAASTDFSDAITELEDAFSRQVKSLAESIDDALNCRSLHSDEIQSVEQVRSREMERESCAPSKPAIHNVDHRKLDEMTASYSDVTLYIDEEELSPPLPLSQSVDRPSSTESDLRLRSVNSSQEYWSMTHKDDKIDTDTSCRSTPSLECQEQRMRMDHLPLLTIEPPSDSSVDLSDRSERGSLKRQNAYDRGITSQQGSPKHIPHSIAAKIITREEQEARHRARPIDSHLAINGTANRQSKSESDYSDGDNDSINSTSNSNDTINCSSESSSRDSLREQTLSKQTYHKETRNSWDSPAFSNDVIRKRHYRIGLNLFNKKPEKGVQYLIERGFVPDTPVGVAHFLLQRKGLSRQMIGEFLGNRQKQFNRDVLDCVVDEMDFSTMELDEALRKFQAHIRVQGEAQKVERLIEAFSQRYCICNPGVVRQFRNPDTIFILAFAIILLNTDMYSPNVKPERKMKLEDFIKNLRGVDDGEDIPREMLIGIYERIRKRELKTNEDHVSQVQKVEKLIVGKKPIGSLHHGLGCVLSLPHRRLVCYCRLFEVPDPNKPQKLGLHQREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVLLFENQYYPNGIRLTSAVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEVQEMEKHRIESELEKQKGVVRPSMSQCSSLKKDSGNGTLPRACLDDSYAGGEGLKRSALSSSLRDLSEAGKRGRRSSAGSLDSNMEFQHFEPLQGLNT
SIO_010081: IQSEC1
subclass of: SO_0000673
so part of: IQSEC1
location: join(1491325..1491623,1523847..1523891,1619798..1620077,1620635..1621899,1635090..1635251,1636478..1636600,1637348..1637514,1639071..1639210,1640473..1640502,1641554..1641679,1642977..1643076,1645959..1646120,1646848..1647024,1653220..1653269,1656624..1656662)
location: region:1491325-1656662:1
so has part: feature:1491325-1491623:1:exon
so has part: feature:1523847-1523891:1:exon
so has part: feature:1619798-1620077:1:exon
so has part: feature:1620635-1621899:1:exon
so has part: feature:1635090-1635251:1:exon
so has part: feature:1636478-1636600:1:exon
so has part: feature:1637348-1637514:1:exon
so has part: feature:1639071-1639210:1:exon
so has part: feature:1640473-1640502:1:exon
so has part: feature:1641554-1641679:1:exon
so has part: feature:1642977-1643076:1:exon
so has part: feature:1645959-1646120:1:exon
so has part: feature:1646848-1647024:1:exon
so has part: feature:1653220-1653269:1:exon
so has part: feature:1656624-1656662:1:exon

XP_031361835.1
type: Protein
SIO_000068: ncbiprotein

position:1491325:1
position: 1491325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1656662:1
position: 1656662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1491325-1491623:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1523847-1523891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1619798-1620077:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1620635-1621899:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1635090-1635251:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1636478-1636600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1637348-1637514:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1639071-1639210:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1640473-1640502:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1641554-1641679:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1642977-1643076:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1645959-1646120:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1646848-1647024:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1653220-1653269:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1656624-1656662:1:exon

IQSEC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: IQSEC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IQ motif and SEC7 domain-containing protein 1 isoform X1
translation: MLATPPLWEKPFGFAKYNPVEPLGLSDAVFDAGYITSLLIGDVPPWLSLNEHAKALNVIFFFFTLFFFLRKSFSTSDYVKENINSKATPHSRMACRRCYLTSLETGSSVSTDPLSVEGEAPSSETGTSLDSPSGYPQGPITHSSALSPEHYEHPYGLYSIAPGQQRARRPKLQHSTSILRKQAEEEAIKRSRSLSESYELSSDLQDKQVEMLERKYGGRLITRHAARTIQTAFRQYQMNKNFERLRSSMSENRMSRRIVLSNMRMQFSFEGPEKVHSSYFEGKQVSVTNDGSKLGSLVPSECNELGETATMKSPAASTDFSDAITELEDAFSRQVKSLAESIDDALNCRSLHSDEIQSVEQVRSREMERESCAPSKPAIHNVDHRKLDEMTASYSDVTLYIDEEELSPPLPLSQSVDRPSSTESDLRLRSVNSSQEYWSMTHKDDKIDTDTSCRSTPSLECQEQRMRMDHLPLLTIEPPSDSSVDLSDRSERGSLKRQNAYDRGITSQQGSPKHIPHSIAAKIITREEQEARHRARPIDSHLAINGTANRQSKSESDYSDGDNDSINSTSNSNDTINCSSESSSRDSLREQTLSKQTYHKETRNSWDSPAFSNDVIRKRHYRIGLNLFNKKPEKGVQYLIERGFVPDTPVGVAHFLLQRKGLSRQMIGEFLGNRQKQFNRDVLDCVVDEMDFSTMELDEALRKFQAHIRVQGEAQKVERLIEAFSQRYCICNPGVVRQFRNPDTIFILAFAIILLNTDMYSPNVKPERKMKLEDFIKNLRGVDDGEDIPREMLIGIYERIRKRELKTNEDHVSQVQKVEKLIVGKKPIGSLHHGLGCVLSLPHRRLVCYCRLFEVPDPNKPQKLGLHQREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVLLFENQYYPNGIRLTSAVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEVQEMEKHRIESELEKQKGVVRPSMSQCSSLKKDSGNGTLPRACLDDSYAGGEGLKRSALSSSLRDLSEAGKRGRRSSAGSLDSNMEGSIISSPHMRRRATSTRECPSRPHQTMPNSSSLLGSLFGSKRGKPPSQSLAAAQPPHHAEGAAAAPHPHHAQFCHQNPPPYHHHHHYHPPPHLHPHPHQYHGHGHGHGHAPYLPHAPHHAPHHGPHHHGPPPPPAASSTKPKHSGISTIV
SIO_010081: IQSEC1
subclass of: SO_0000673
so part of: IQSEC1
location: join(1491325..1491623,1523847..1523891,1619798..1620077,1620635..1621899,1635090..1635251,1636478..1636600,1637348..1637514,1639071..1639210,1640473..1640502,1641554..1641679,1642977..1643076,1645959..1646120,1646848..1647024,1653220..1653269,1654667..1655119)
location: region:1491325-1655119:1
so has part: feature:1491325-1491623:1:exon
so has part: feature:1523847-1523891:1:exon
so has part: feature:1619798-1620077:1:exon
so has part: feature:1620635-1621899:1:exon
so has part: feature:1635090-1635251:1:exon
so has part: feature:1636478-1636600:1:exon
so has part: feature:1637348-1637514:1:exon
so has part: feature:1639071-1639210:1:exon
so has part: feature:1640473-1640502:1:exon
so has part: feature:1641554-1641679:1:exon
so has part: feature:1642977-1643076:1:exon
so has part: feature:1645959-1646120:1:exon
so has part: feature:1646848-1647024:1:exon
so has part: feature:1653220-1653269:1:exon
so has part: feature:1654667-1655119:1:exon

XP_021400465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1491325-1491623:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1523847-1523891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1619798-1620077:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1620635-1621899:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1635090-1635251:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1636478-1636600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1637348-1637514:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1639071-1639210:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1640473-1640502:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1641554-1641679:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1642977-1643076:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1645959-1646120:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1646848-1647024:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1653220-1653269:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1654667-1655119:1:exon

IQSEC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: IQSEC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IQ motif and SEC7 domain-containing protein 1 isoform X3
translation: MLATPPLWEKPFGFAKYNPVEPLGLSDAVFDAGYITSLLIGDVPPWLSLNEHAKALNVIFFFFTLFFFLRKSFSTSDYVKENINSKATPHSRMACRRCYFVEGEAPSSETGTSLDSPSGYPQGPITHSSALSPEHYEHPYGLYSIAPGQQRARRPKLQHSTSILRKQAEEEAIKRSRSLSESYELSSDLQDKQVEMLERKYGGRLITRHAARTIQTAFRQYQMNKNFERLRSSMSENRMSRRIVLSNMRMQFSFEGPEKVHSSYFEGKQVSVTNDGSKLGSLVPSECNELGETATMKSPAASTDFSDAITELEDAFSRQVKSLAESIDDALNCRSLHSDEIQSVEQVRSREMERESCAPSKPAIHNVDHRKLDEMTASYSDVTLYIDEEELSPPLPLSQSVDRPSSTESDLRLRSVNSSQEYWSMTHKDDKIDTDTSCRSTPSLECQEQRMRMDHLPLLTIEPPSDSSVDLSDRSERGSLKRQNAYDRGITSQQGSPKHIPHSIAAKIITREEQEARHRARPIDSHLAINGTANRQSKSESDYSDGDNDSINSTSNSNDTINCSSESSSRDSLREQTLSKQTYHKETRNSWDSPAFSNDVIRKRHYRIGLNLFNKKPEKGVQYLIERGFVPDTPVGVAHFLLQRKGLSRQMIGEFLGNRQKQFNRDVLDCVVDEMDFSTMELDEALRKFQAHIRVQGEAQKVERLIEAFSQRYCICNPGVVRQFRNPDTIFILAFAIILLNTDMYSPNVKPERKMKLEDFIKNLRGVDDGEDIPREMLIGIYERIRKRELKTNEDHVSQVQKVEKLIVGKKPIGSLHHGLGCVLSLPHRRLVCYCRLFEVPDPNKPQKLGLHQREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVLLFENQYYPNGIRLTSAVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEVQEMEKHRIESELEKQKGVVRPSMSQCSSLKKDSGNGTLPRACLDDSYAGGEGLKRSALSSSLRDLSEAGKRGRRSSAGSLDSNMEGSIISSPHMRRRATSTRECPSRPHQTMPNSSSLLGSLFGSKRGKPPSQSLAAAQPPHHAEGAAAAPHPHHAQFCHQNPPPYHHHHHYHPPPHLHPHPHQYHGHGHGHGHAPYLPHAPHHAPHHGPHHHGPPPPPAASSTKPKHSGISTIV
SIO_010081: IQSEC1
subclass of: SO_0000673
so part of: IQSEC1
location: join(1491325..1491623,1619798..1620077,1620635..1621899,1635090..1635251,1636478..1636600,1637348..1637514,1639071..1639210,1640473..1640502,1641554..1641679,1642977..1643076,1645959..1646120,1646848..1647024,1653220..1653269,1654667..1655119)
location: region:1491325-1655119:1
so has part: feature:1491325-1491623:1:exon
so has part: feature:1619798-1620077:1:exon
so has part: feature:1620635-1621899:1:exon
so has part: feature:1635090-1635251:1:exon
so has part: feature:1636478-1636600:1:exon
so has part: feature:1637348-1637514:1:exon
so has part: feature:1639071-1639210:1:exon
so has part: feature:1640473-1640502:1:exon
so has part: feature:1641554-1641679:1:exon
so has part: feature:1642977-1643076:1:exon
so has part: feature:1645959-1646120:1:exon
so has part: feature:1646848-1647024:1:exon
so has part: feature:1653220-1653269:1:exon
so has part: feature:1654667-1655119:1:exon

XP_021400467.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1491325-1491623:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1619798-1620077:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1620635-1621899:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1635090-1635251:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1636478-1636600:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1637348-1637514:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1639071-1639210:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1640473-1640502:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1641554-1641679:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1642977-1643076:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1645959-1646120:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1646848-1647024:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1653220-1653269:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1654667-1655119:1:exon

IQSEC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: IQSEC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IQ motif and SEC7 domain-containing protein 1 isoform X7
translation: MLATPPLWEKPFGFAKYNPVEPLGLSDAVFDAGYITSLLIGDVPPWLSLNEHAKALNVIFFFFTLFFFLRKSFSTSDYVKENINSKATPHSRMACRRCYLTSLETGSSVSTDPLSVEGEAPSSETGTSLDSPSGYPQGPITHSSALSPEHYEHPYGLYSIAPGQQRARRPKLQHSTSILRKQAEEEAIKRSRSLSESYELSSDLQDKQVEMLERKYGGRLITRHAARTIQTAFRQYQMNKNFERLRSSMSENRMSRRIVLSNMRMQFSFEGPEKVHSSYFEGKQVSVTNDGSKLGSLVPSECNELGETATMKSPAASTDFSDAITELEDAFSRQVKSLAESIDDALNCRSLHSDEIQSVEQVRSREMERESCAPSKPAIHNVDHRKLDEMTASYSDVTLYIDEEELSPPLPLSQSVDRPSSTESDLRLRSVNSSQEYWSMTHKDDKIDTDTSCRSTPSLECQEQRMRMDHLPLLTIEPPSDSSVDLSDRSERGSLKRQNAYDRGITSQQGSPKHIPHSIAAKIITREEQEARHRARPIDSHLAINGTANRQSKSESDYSDGDNDSINSTSNSNDTINCSSESSSRDSLREQTLSKQTYHKETRNSWDSPAFSNDVIRKRHYRIGLNLFNKKPEKGVQYLIERGFVPDTPVGVAHFLLQRKGLSRQMIGEFLGNRQKQFNRDVLDCVVDEMDFSTMELDEALRKFQAHIRVQGEAQKVERLIEAFSQRYCICNPGVVRQFRNPDTIFILAFAIILLNTDMYSPNVKPERKMKLEDFIKNLRGVDDGEDIPREMLIGIYERIRKRELKTNEDHVSQVQKVEKLIVGKKPIGSLHHGLGCVLSLPHRRLVCYCRLFEVPDPNKPQKLGLHQREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVLLFENQYYPNGIRLTSAVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEVQEMEKHRIESELEKQKGVVRPSMSQCSSLKKDSGNGTLPRACLDDSYAGGEGLKRSALSSSLRDLSEAGVHH
SIO_010081: IQSEC1
subclass of: SO_0000673
so part of: IQSEC1
location: join(1491325..1491623,1523847..1523891,1619798..1620077,1620635..1621899,1635090..1635251,1636478..1636600,1637348..1637514,1639071..1639210,1640473..1640502,1641554..1641679,1642977..1643076,1645959..1646120,1646848..1647024,1654667..1654680)
location: region:1491325-1654680:1
so has part: feature:1491325-1491623:1:exon
so has part: feature:1523847-1523891:1:exon
so has part: feature:1619798-1620077:1:exon
so has part: feature:1620635-1621899:1:exon
so has part: feature:1635090-1635251:1:exon
so has part: feature:1636478-1636600:1:exon
so has part: feature:1637348-1637514:1:exon
so has part: feature:1639071-1639210:1:exon
so has part: feature:1640473-1640502:1:exon
so has part: feature:1641554-1641679:1:exon
so has part: feature:1642977-1643076:1:exon
so has part: feature:1645959-1646120:1:exon
so has part: feature:1646848-1647024:1:exon
so has part: feature:1654667-1654680:1:exon

XP_031361836.1
type: Protein
SIO_000068: ncbiprotein

position:1654680:1
position: 1654680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1491325-1491623:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1523847-1523891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1619798-1620077:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1620635-1621899:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1635090-1635251:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1636478-1636600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1637348-1637514:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1639071-1639210:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1640473-1640502:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1641554-1641679:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1642977-1643076:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1645959-1646120:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1646848-1647024:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1654667-1654680:1:exon

IQSEC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: IQSEC1
product: IQ motif and Sec7 domain ArfGEF 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 47 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021544793.2
SIO_010081: IQSEC1
subclass of: SO_0000673
so part of: IQSEC1
location: join(1530713..1530819,1619798..1620077,1620635..1621899,1635090..1635251,1636478..1636600,1637348..1637514,1639071..1639210,1640473..1640502,1641554..1641679,1642977..1643076,1645959..1646120,1646848..1647024,1653220..1653269,1654667..1659239)
location: region:1530713-1659239:1
so has part: feature:1530713-1530819:1:exon
so has part: feature:1619798-1620077:1:exon
so has part: feature:1620635-1621899:1:exon
so has part: feature:1635090-1635251:1:exon
so has part: feature:1636478-1636600:1:exon
so has part: feature:1637348-1637514:1:exon
so has part: feature:1639071-1639210:1:exon
so has part: feature:1640473-1640502:1:exon
so has part: feature:1641554-1641679:1:exon
so has part: feature:1642977-1643076:1:exon
so has part: feature:1645959-1646120:1:exon
so has part: feature:1646848-1647024:1:exon
so has part: feature:1653220-1653269:1:exon
so has part: feature:1654667-1659239:1:exon

position:1530713:1
position: 1530713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1530713-1530819:1:exon

position:1530819:1
position: 1530819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1619798-1620077:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1620635-1621899:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1635090-1635251:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1636478-1636600:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1637348-1637514:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1639071-1639210:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1640473-1640502:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1641554-1641679:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1642977-1643076:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1645959-1646120:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1646848-1647024:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1653220-1653269:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1654667-1659239:1:exon

IQSEC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: IQSEC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IQ motif and SEC7 domain-containing protein 1 isoform X4
translation: MLKLKAFCLDYWQFLCLQPLHGFYKSVEGEAPSSETGTSLDSPSGYPQGPITHSSALSPEHYEHPYGLYSIAPGQQRARRPKLQHSTSILRKQAEEEAIKRSRSLSESYELSSDLQDKQVEMLERKYGGRLITRHAARTIQTAFRQYQMNKNFERLRSSMSENRMSRRIVLSNMRMQFSFEGPEKVHSSYFEGKQVSVTNDGSKLGSLVPSECNELGETATMKSPAASTDFSDAITELEDAFSRQVKSLAESIDDALNCRSLHSDEIQSVEQVRSREMERESCAPSKPAIHNVDHRKLDEMTASYSDVTLYIDEEELSPPLPLSQSVDRPSSTESDLRLRSVNSSQEYWSMTHKDDKIDTDTSCRSTPSLECQEQRMRMDHLPLLTIEPPSDSSVDLSDRSERGSLKRQNAYDRGITSQQGSPKHIPHSIAAKIITREEQEARHRARPIDSHLAINGTANRQSKSESDYSDGDNDSINSTSNSNDTINCSSESSSRDSLREQTLSKQTYHKETRNSWDSPAFSNDVIRKRHYRIGLNLFNKKPEKGVQYLIERGFVPDTPVGVAHFLLQRKGLSRQMIGEFLGNRQKQFNRDVLDCVVDEMDFSTMELDEALRKFQAHIRVQGEAQKVERLIEAFSQRYCICNPGVVRQFRNPDTIFILAFAIILLNTDMYSPNVKPERKMKLEDFIKNLRGVDDGEDIPREMLIGIYERIRKRELKTNEDHVSQVQKVEKLIVGKKPIGSLHHGLGCVLSLPHRRLVCYCRLFEVPDPNKPQKLGLHQREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVLLFENQYYPNGIRLTSAVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEVQEMEKHRIESELEKQKGVVRPSMSQCSSLKKDSGNGTLPRACLDDSYAGGEGLKRSALSSSLRDLSEAGKRGRRSSAGSLDSNMEGSIISSPHMRRRATSTRECPSRPHQTMPNSSSLLGSLFGSKRGKPPSQSLAAAQPPHHAEGAAAAPHPHHAQFCHQNPPPYHHHHHYHPPPHLHPHPHQYHGHGHGHGHAPYLPHAPHHAPHHGPHHHGPPPPPAASSTKPKHSGISTIV
SIO_010081: IQSEC1
subclass of: SO_0000673
so part of: IQSEC1
location: join(1530743..1530819,1619798..1620077,1620635..1621899,1635090..1635251,1636478..1636600,1637348..1637514,1639071..1639210,1640473..1640502,1641554..1641679,1642977..1643076,1645959..1646120,1646848..1647024,1653220..1653269,1654667..1655119)
location: region:1530743-1655119:1
so has part: feature:1530743-1530819:1:exon
so has part: feature:1619798-1620077:1:exon
so has part: feature:1620635-1621899:1:exon
so has part: feature:1635090-1635251:1:exon
so has part: feature:1636478-1636600:1:exon
so has part: feature:1637348-1637514:1:exon
so has part: feature:1639071-1639210:1:exon
so has part: feature:1640473-1640502:1:exon
so has part: feature:1641554-1641679:1:exon
so has part: feature:1642977-1643076:1:exon
so has part: feature:1645959-1646120:1:exon
so has part: feature:1646848-1647024:1:exon
so has part: feature:1653220-1653269:1:exon
so has part: feature:1654667-1655119:1:exon

XP_021400468.1
type: Protein
SIO_000068: ncbiprotein

position:1530743:1
position: 1530743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1530743-1530819:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1619798-1620077:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1620635-1621899:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1635090-1635251:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1636478-1636600:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1637348-1637514:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1639071-1639210:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1640473-1640502:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1641554-1641679:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1642977-1643076:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1645959-1646120:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1646848-1647024:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1653220-1653269:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1654667-1655119:1:exon

IQSEC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: IQSEC1
product: IQ motif and Sec7 domain ArfGEF 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 47 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021544794.2
SIO_010081: IQSEC1
subclass of: SO_0000673
so part of: IQSEC1
location: join(1603435..1603518,1619798..1620077,1620635..1621899,1635090..1635251,1636478..1636600,1637348..1637514,1639071..1639210,1640473..1640502,1641554..1641679,1642977..1643076,1645959..1646120,1646848..1647024,1653220..1653269,1654667..1659239)
location: region:1603435-1659239:1
so has part: feature:1603435-1603518:1:exon
so has part: feature:1619798-1620077:1:exon
so has part: feature:1620635-1621899:1:exon
so has part: feature:1635090-1635251:1:exon
so has part: feature:1636478-1636600:1:exon
so has part: feature:1637348-1637514:1:exon
so has part: feature:1639071-1639210:1:exon
so has part: feature:1640473-1640502:1:exon
so has part: feature:1641554-1641679:1:exon
so has part: feature:1642977-1643076:1:exon
so has part: feature:1645959-1646120:1:exon
so has part: feature:1646848-1647024:1:exon
so has part: feature:1653220-1653269:1:exon
so has part: feature:1654667-1659239:1:exon

position:1603435:1
position: 1603435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1603435-1603518:1:exon

position:1603518:1
position: 1603518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1619798-1620077:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1620635-1621899:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1635090-1635251:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1636478-1636600:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1637348-1637514:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1639071-1639210:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1640473-1640502:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1641554-1641679:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1642977-1643076:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1645959-1646120:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1646848-1647024:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1653220-1653269:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1654667-1659239:1:exon

IQSEC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: IQSEC1
product: IQ motif and Sec7 domain ArfGEF 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 37 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021544796.2
SIO_010081: IQSEC1
subclass of: SO_0000673
so part of: IQSEC1
location: join(1603439..1603518,1619798..1620077,1620635..1621899,1635090..1635251,1636478..1636600,1637348..1637514,1639071..1639210,1640473..1640502,1641554..1641679,1642977..1643076,1645959..1646120,1646848..1647024,1653220..1653269,1656624..1659239)
location: region:1603439-1659239:1
so has part: feature:1603439-1603518:1:exon
so has part: feature:1619798-1620077:1:exon
so has part: feature:1620635-1621899:1:exon
so has part: feature:1635090-1635251:1:exon
so has part: feature:1636478-1636600:1:exon
so has part: feature:1637348-1637514:1:exon
so has part: feature:1639071-1639210:1:exon
so has part: feature:1640473-1640502:1:exon
so has part: feature:1641554-1641679:1:exon
so has part: feature:1642977-1643076:1:exon
so has part: feature:1645959-1646120:1:exon
so has part: feature:1646848-1647024:1:exon
so has part: feature:1653220-1653269:1:exon
so has part: feature:1656624-1659239:1:exon

position:1603439:1
position: 1603439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1603439-1603518:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1619798-1620077:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1620635-1621899:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1635090-1635251:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1636478-1636600:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1637348-1637514:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1639071-1639210:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1640473-1640502:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1641554-1641679:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1642977-1643076:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1645959-1646120:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1646848-1647024:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1653220-1653269:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1656624-1659239:1:exon

IQSEC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: IQSEC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IQ motif and SEC7 domain-containing protein 1 isoform X8
translation: MWCLHCSSERTQSLLELELDSCVEGEAPSSETGTSLDSPSGYPQGPITHSSALSPEHYEHPYGLYSIAPGQQRARRPKLQHSTSILRKQAEEEAIKRSRSLSESYELSSDLQDKQVEMLERKYGGRLITRHAARTIQTAFRQYQMNKNFERLRSSMSENRMSRRIVLSNMRMQFSFEGPEKVHSSYFEGKQVSVTNDGSKLGSLVPSECNELGETATMKSPAASTDFSDAITELEDAFSRQVKSLAESIDDALNCRSLHSDEIQSVEQVRSREMERESCAPSKPAIHNVDHRKLDEMTASYSDVTLYIDEEELSPPLPLSQSVDRPSSTESDLRLRSVNSSQEYWSMTHKDDKIDTDTSCRSTPSLECQEQRMRMDHLPLLTIEPPSDSSVDLSDRSERGSLKRQNAYDRGITSQQGSPKHIPHSIAAKIITREEQEARHRARPIDSHLAINGTANRQSKSESDYSDGDNDSINSTSNSNDTINCSSESSSRDSLREQTLSKQTYHKETRNSWDSPAFSNDVIRKRHYRIGLNLFNKKPEKGVQYLIERGFVPDTPVGVAHFLLQRKGLSRQMIGEFLGNRQKQFNRDVLDCVVDEMDFSTMELDEALRKFQAHIRVQGEAQKVERLIEAFSQRYCICNPGVVRQFRNPDTIFILAFAIILLNTDMYSPNVKPERKMKLEDFIKNLRGVDDGEDIPREMLIGIYERIRKRELKTNEDHVSQVQKVEKLIVGKKPIGSLHHGLGCVLSLPHRRLVCYCRLFEVPDPNKPQKLGLHQREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVLLFENQYYPNGIRLTSAVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEVQEMEKHRIESELEKQKGVVRPSMSQCSSLKKDSGNGTLPRACLDDSYAGGEGLKRSALSSSLRDLSEAGKRGRRSSAGSLDSNMEFQHFEPLQGLNT
SIO_010081: IQSEC1
subclass of: SO_0000673
so part of: IQSEC1
location: join(1603454..1603518,1619798..1620077,1620635..1621899,1635090..1635251,1636478..1636600,1637348..1637514,1639071..1639210,1640473..1640502,1641554..1641679,1642977..1643076,1645959..1646120,1646848..1647024,1653220..1653269,1656624..1656662)
location: region:1603454-1656662:1
so has part: feature:1603454-1603518:1:exon
so has part: feature:1619798-1620077:1:exon
so has part: feature:1620635-1621899:1:exon
so has part: feature:1635090-1635251:1:exon
so has part: feature:1636478-1636600:1:exon
so has part: feature:1637348-1637514:1:exon
so has part: feature:1639071-1639210:1:exon
so has part: feature:1640473-1640502:1:exon
so has part: feature:1641554-1641679:1:exon
so has part: feature:1642977-1643076:1:exon
so has part: feature:1645959-1646120:1:exon
so has part: feature:1646848-1647024:1:exon
so has part: feature:1653220-1653269:1:exon
so has part: feature:1656624-1656662:1:exon

XP_021400471.1
type: Protein
SIO_000068: ncbiprotein

position:1603454:1
position: 1603454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1603454-1603518:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1619798-1620077:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1620635-1621899:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1635090-1635251:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1636478-1636600:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1637348-1637514:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1639071-1639210:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1640473-1640502:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1641554-1641679:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1642977-1643076:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1645959-1646120:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1646848-1647024:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1653220-1653269:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1656624-1656662:1:exon

IQSEC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: IQSEC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IQ motif and SEC7 domain-containing protein 1 isoform X5
translation: MWCLHCSSERTQSLLELELDSCVEGEAPSSETGTSLDSPSGYPQGPITHSSALSPEHYEHPYGLYSIAPGQQRARRPKLQHSTSILRKQAEEEAIKRSRSLSESYELSSDLQDKQVEMLERKYGGRLITRHAARTIQTAFRQYQMNKNFERLRSSMSENRMSRRIVLSNMRMQFSFEGPEKVHSSYFEGKQVSVTNDGSKLGSLVPSECNELGETATMKSPAASTDFSDAITELEDAFSRQVKSLAESIDDALNCRSLHSDEIQSVEQVRSREMERESCAPSKPAIHNVDHRKLDEMTASYSDVTLYIDEEELSPPLPLSQSVDRPSSTESDLRLRSVNSSQEYWSMTHKDDKIDTDTSCRSTPSLECQEQRMRMDHLPLLTIEPPSDSSVDLSDRSERGSLKRQNAYDRGITSQQGSPKHIPHSIAAKIITREEQEARHRARPIDSHLAINGTANRQSKSESDYSDGDNDSINSTSNSNDTINCSSESSSRDSLREQTLSKQTYHKETRNSWDSPAFSNDVIRKRHYRIGLNLFNKKPEKGVQYLIERGFVPDTPVGVAHFLLQRKGLSRQMIGEFLGNRQKQFNRDVLDCVVDEMDFSTMELDEALRKFQAHIRVQGEAQKVERLIEAFSQRYCICNPGVVRQFRNPDTIFILAFAIILLNTDMYSPNVKPERKMKLEDFIKNLRGVDDGEDIPREMLIGIYERIRKRELKTNEDHVSQVQKVEKLIVGKKPIGSLHHGLGCVLSLPHRRLVCYCRLFEVPDPNKPQKLGLHQREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVLLFENQYYPNGIRLTSAVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEVQEMEKHRIESELEKQKGVVRPSMSQCSSLKKDSGNGTLPRACLDDSYAGGEGLKRSALSSSLRDLSEAGKRGRRSSAGSLDSNMEGSIISSPHMRRRATSTRECPSRPHQTMPNSSSLLGSLFGSKRGKPPSQSLAAAQPPHHAEGAAAAPHPHHAQFCHQNPPPYHHHHHYHPPPHLHPHPHQYHGHGHGHGHAPYLPHAPHHAPHHGPHHHGPPPPPAASSTKPKHSGISTIV
SIO_010081: IQSEC1
subclass of: SO_0000673
so part of: IQSEC1
location: join(1603454..1603518,1619798..1620077,1620635..1621899,1635090..1635251,1636478..1636600,1637348..1637514,1639071..1639210,1640473..1640502,1641554..1641679,1642977..1643076,1645959..1646120,1646848..1647024,1653220..1653269,1654667..1655119)
location: region:1603454-1655119:1
so has part: feature:1603454-1603518:1:exon
so has part: feature:1619798-1620077:1:exon
so has part: feature:1620635-1621899:1:exon
so has part: feature:1635090-1635251:1:exon
so has part: feature:1636478-1636600:1:exon
so has part: feature:1637348-1637514:1:exon
so has part: feature:1639071-1639210:1:exon
so has part: feature:1640473-1640502:1:exon
so has part: feature:1641554-1641679:1:exon
so has part: feature:1642977-1643076:1:exon
so has part: feature:1645959-1646120:1:exon
so has part: feature:1646848-1647024:1:exon
so has part: feature:1653220-1653269:1:exon
so has part: feature:1654667-1655119:1:exon

XP_021400469.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1603454-1603518:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1619798-1620077:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1620635-1621899:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1635090-1635251:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1636478-1636600:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1637348-1637514:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1639071-1639210:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1640473-1640502:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1641554-1641679:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1642977-1643076:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1645959-1646120:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1646848-1647024:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1653220-1653269:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1654667-1655119:1:exon

LOC116184104
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116184104
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1660023..1664081
location: region:1660023-1664081:1
so has part: feature:1660023-1664081:1:exon
subclass of: SO_0000011

116184104
type: Gene
SIO_000068: ncbigene

position:1660023:1
position: 1660023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1664081:1
position: 1664081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1660023-1664081:1:exon

LOC116184104
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC116184104
product: uncharacterized LOC116184104
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004148842.1
SIO_010081: LOC116184104
subclass of: SO_0000673
so part of: LOC116184104
location: join(1660023..1661052,1663549..1664081)
location: region:1660023-1664081:1
so has part: feature:1660023-1661052:1:exon
so has part: feature:1663549-1664081:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1660023-1661052:1:exon

position:1661052:1
position: 1661052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1663549-1664081:1:exon

position:1663549:1
position: 1663549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ACAD9
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: ACAD9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1666880..1681214
location: region:1666880-1681214:1
so has part: feature:1666880-1681214:1:exon
subclass of: SO_0000010

110478251
type: Gene
SIO_000068: ncbigene

position:1666880:1
position: 1666880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1681214:1
position: 1681214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1666880-1681214:1:exon

ACAD9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ACAD9
product: acyl-CoA dehydrogenase family member 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_021544788.1
SIO_010081: ACAD9
subclass of: SO_0000673
so part of: ACAD9
location: join(1666880..1667020,1668473..1668566,1669897..1669998,1670197..1670303,1671034..1671134,1671804..1671882,1672793..1672967,1673564..1673637,1674861..1674936,1675623..1675693,1676022..1676141,1676761..1676889,1677641..1677720,1678227..1678353,1679047..1679124,1679602..1679730,1680450..1680522,1680971..1681214)
location: region:1666880-1681214:1
so has part: feature:1666880-1667020:1:exon
so has part: feature:1668473-1668566:1:exon
so has part: feature:1669897-1669998:1:exon
so has part: feature:1670197-1670303:1:exon
so has part: feature:1671034-1671134:1:exon
so has part: feature:1671804-1671882:1:exon
so has part: feature:1672793-1672967:1:exon
so has part: feature:1673564-1673637:1:exon
so has part: feature:1674861-1674936:1:exon
so has part: feature:1675623-1675693:1:exon
so has part: feature:1676022-1676141:1:exon
so has part: feature:1676761-1676889:1:exon
so has part: feature:1677641-1677720:1:exon
so has part: feature:1678227-1678353:1:exon
so has part: feature:1679047-1679124:1:exon
so has part: feature:1679602-1679730:1:exon
so has part: feature:1680450-1680522:1:exon
so has part: feature:1680971-1681214:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1666880-1667020:1:exon

position:1667020:1
position: 1667020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1668473-1668566:1:exon

position:1668473:1
position: 1668473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1668566:1
position: 1668566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1669897-1669998:1:exon

position:1669897:1
position: 1669897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1669998:1
position: 1669998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1670197-1670303:1:exon

position:1670197:1
position: 1670197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1670303:1
position: 1670303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1671034-1671134:1:exon

position:1671034:1
position: 1671034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1671134:1
position: 1671134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1671804-1671882:1:exon

position:1671804:1
position: 1671804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1671882:1
position: 1671882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1672793-1672967:1:exon

position:1672793:1
position: 1672793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1672967:1
position: 1672967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1673564-1673637:1:exon

position:1673564:1
position: 1673564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1673637:1
position: 1673637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1674861-1674936:1:exon

position:1674861:1
position: 1674861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1674936:1
position: 1674936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1675623-1675693:1:exon

position:1675623:1
position: 1675623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1675693:1
position: 1675693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1676022-1676141:1:exon

position:1676022:1
position: 1676022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1676141:1
position: 1676141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1676761-1676889:1:exon

position:1676761:1
position: 1676761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1676889:1
position: 1676889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1677641-1677720:1:exon

position:1677641:1
position: 1677641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1677720:1
position: 1677720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1678227-1678353:1:exon

position:1678227:1
position: 1678227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1678353:1
position: 1678353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1679047-1679124:1:exon

position:1679047:1
position: 1679047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1679124:1
position: 1679124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1679602-1679730:1:exon

position:1679602:1
position: 1679602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1679730:1
position: 1679730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1680450-1680522:1:exon

position:1680450:1
position: 1680450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1680522:1
position: 1680522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1680971-1681214:1:exon

position:1680971:1
position: 1680971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ACAD9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ACAD9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complex I assembly factor ACAD9, mitochondrial
translation: MSAALRLLRALRAARPRARAGPAARGLRTAAPRRAFAKELFLGTLRKEEVFPYPEITNEELAEINQFVGPVEKFFNEEVDSKKIDQDAKIPPETLQGLKDLGLFGMQIPEEYGGLGLSNTMYARLGEIISLDGSIAVTLAAHQAIGLKGILIAGTEEQKAKYLPRLASGEHIAAFCLTEPGSGSDAASIQTRATLSQDGKHFLLNGSKVWISNGGLASIFTVFARTEVVDKDGQVKDKITAFIVERDFGGVTHGKPEDKLGIRGSNTCEVHFENTKVPVENVIGEVGGGFKVAMNILNSGRFSMGSASAGMIKKLIELTSEYACTRKQFNKKLSQFGLIQEKFCLMAVKAYVMESMAYLTAGMMDRPGFPDCSVEAAMVKVFSSEGAWACVSEALQIFGGLGYMKDYPYERYLRDTRILLIFEGTNEILRMFIALTGMQHAGKILTDKIKAIKKGNMGVALGEFLTRLQDTLGRKVDLGLAGDRGVVHPSLQESAKKLEENVYYFGTTVRGLLSRFGKTIVEEQLVLKRVADVVINLYAMTAAISRASRSISIGLRNHDHEVLLTNIFCTEAYFKNNYAMAQLEKYADENLDDSIKKAAKQILEKRAYICSHPLDRTF
SIO_010081: ACAD9
subclass of: SO_0000673
so part of: ACAD9
location: join(1666880..1667020,1668473..1668566,1669897..1669998,1670197..1670303,1671034..1671134,1671804..1671882,1672793..1672967,1673564..1673637,1674861..1674936,1675623..1675693,1676022..1676141,1676761..1676889,1677641..1677720,1678227..1678353,1679047..1679124,1679602..1679730,1680450..1680522,1680971..1681071)
location: region:1666880-1681071:1
so has part: feature:1666880-1667020:1:exon
so has part: feature:1668473-1668566:1:exon
so has part: feature:1669897-1669998:1:exon
so has part: feature:1670197-1670303:1:exon
so has part: feature:1671034-1671134:1:exon
so has part: feature:1671804-1671882:1:exon
so has part: feature:1672793-1672967:1:exon
so has part: feature:1673564-1673637:1:exon
so has part: feature:1674861-1674936:1:exon
so has part: feature:1675623-1675693:1:exon
so has part: feature:1676022-1676141:1:exon
so has part: feature:1676761-1676889:1:exon
so has part: feature:1677641-1677720:1:exon
so has part: feature:1678227-1678353:1:exon
so has part: feature:1679047-1679124:1:exon
so has part: feature:1679602-1679730:1:exon
so has part: feature:1680450-1680522:1:exon
so has part: feature:1680971-1681071:1:exon

XP_021400463.1
type: Protein
SIO_000068: ncbiprotein

position:1681071:1
position: 1681071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1666880-1667020:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1668473-1668566:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1669897-1669998:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1670197-1670303:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1671034-1671134:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1671804-1671882:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1672793-1672967:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1673564-1673637:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1674861-1674936:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1675623-1675693:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1676022-1676141:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1676761-1676889:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1677641-1677720:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1678227-1678353:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1679047-1679124:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1679602-1679730:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1680450-1680522:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1680971-1681071:1:exon

LOC110470662
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110470662
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1711032..1714454
location: region:1711032-1714454:1
so has part: feature:1711032-1714454:1:exon
subclass of: SO_0000011

110470662
type: Gene
SIO_000068: ncbigene

position:1711032:1
position: 1711032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1714454:1
position: 1714454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1711032-1714454:1:exon

LOC110470662
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110470662
product: uncharacterized LOC110470662
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002465466.1
SIO_010081: LOC110470662
subclass of: SO_0000673
so part of: LOC110470662
location: join(1711032..1711382,1711645..1711804,1714283..1714454)
location: region:1711032-1714454:1
so has part: feature:1711032-1711382:1:exon
so has part: feature:1711645-1711804:1:exon
so has part: feature:1714283-1714454:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1711032-1711382:1:exon

position:1711382:1
position: 1711382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1711645-1711804:1:exon

position:1711645:1
position: 1711645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1711804:1
position: 1711804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1714283-1714454:1:exon

position:1714283:1
position: 1714283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110470667
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110470667
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1736725..1737322
location: region:1736725-1737322:1
so has part: feature:1736725-1737322:1:exon
subclass of: SO_0000010

110470667
type: Gene
SIO_000068: ncbigene

position:1736725:1
position: 1736725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1737322:1
position: 1737322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1736725-1737322:1:exon

LOC110470667
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110470667
product: platelet glycoprotein IX
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021530487.1
SIO_010081: LOC110470667
subclass of: SO_0000673
so part of: LOC110470667
location: 1736725..1737322
location: region:1736725-1737322:1
so has part: feature:1736725-1737322:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1736725-1737322:1:exon

LOC110470667
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110470667
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: platelet glycoprotein IX
translation: MELLAVLGCALLLPRALAEDCPSPCSCWSLGEPWGTGVDCSSRGLRALPALPRLTRSLRLHNNSLAAIPAGALDSLGHLQELQLWDNPWHCDCHILYLKLWLQDFSAPALARLRCASPARLRMKALGQLTGNDLGVCTRLLPTKCLQFFWRDLALIAGAIITLLLVAWALKFSKKLVCQLSLGRRRLRRNIPKTHKVL
SIO_010081: LOC110470667
subclass of: SO_0000673
so part of: LOC110470667
location: 1736726..1737322
location: region:1736726-1737322:1
so has part: feature:1736726-1737322:1:exon

XP_021386162.1
type: Protein
SIO_000068: ncbiprotein

position:1736726:1
position: 1736726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1736726-1737322:1:exon

RAB43
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: RAB43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1749004..1763159
location: region:1749004-1763159:1
so has part: feature:1749004-1763159:1:exon
subclass of: SO_0000010

110470645
type: Gene
SIO_000068: ncbigene

position:1749004:1
position: 1749004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1763159:1
position: 1763159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1749004-1763159:1:exon

RAB43
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: RAB43
product: RAB43, member RAS oncogene family
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021530444.2
SIO_010081: RAB43
subclass of: SO_0000673
so part of: RAB43
location: join(1749004..1749258,1756799..1756982,1757506..1763159)
location: region:1749004-1763159:1
so has part: feature:1749004-1749258:1:exon
so has part: feature:1756799-1756982:1:exon
so has part: feature:1757506-1763159:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1749004-1749258:1:exon

position:1749258:1
position: 1749258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1756799-1756982:1:exon

position:1756799:1
position: 1756799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1756982:1
position: 1756982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1757506-1763159:1:exon

position:1757506:1
position: 1757506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAB43
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: RAB43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-43
translation: MPGAAALGAGPDPEESYDFLFKLVLIGDASVGKTCLVQRFKTGAFSERQGSTIGVDFTMKSLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDISKRGSFLSIPRWIEDVRKYAGSNIVQLLIGNKSDLSDLREVQLEEAQSLAEHYDNIICAIETSAKDSSNVEEVFVKMATELMMRHGGPMFSEKNTDSIKLDSKDVVEGWGCGC
SIO_010081: RAB43
subclass of: SO_0000673
so part of: RAB43
location: join(1749049..1749258,1756799..1756982,1757506..1757759)
location: region:1749049-1757759:1
so has part: feature:1749049-1749258:1:exon
so has part: feature:1756799-1756982:1:exon
so has part: feature:1757506-1757759:1:exon

XP_021386119.1
type: Protein
SIO_000068: ncbiprotein

position:1749049:1
position: 1749049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1757759:1
position: 1757759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1749049-1749258:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1756799-1756982:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1757506-1757759:1:exon

LOC110470663
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110470663
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1765935..1775430)
location: region:1765935-1775430:-1
so has part: feature:1765935-1775430:-1:exon
subclass of: SO_0000010

110470663
type: Gene
SIO_000068: ncbigene

position:1765935:-1
position: 1765935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1775430:-1
position: 1775430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1765935-1775430:-1:exon

LOC110470663
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110470663
product: haloacid dehalogenase-like hydrolase domain-containing 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021530480.2
SIO_010081: LOC110470663
subclass of: SO_0000673
so part of: LOC110470663
location: complement(join(1765935..1766993,1767813..1768001,1769348..1769522,1770384..1770417,1771603..1771696,1772394..1772506,1773174..1773383,1775379..1775430))
location: region:1765935-1775430:-1
so has part: feature:1775379-1775430:-1:exon
so has part: feature:1773174-1773383:-1:exon
so has part: feature:1772394-1772506:-1:exon
so has part: feature:1771603-1771696:-1:exon
so has part: feature:1770384-1770417:-1:exon
so has part: feature:1769348-1769522:-1:exon
so has part: feature:1767813-1768001:-1:exon
so has part: feature:1765935-1766993:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1775379-1775430:-1:exon

position:1775379:-1
position: 1775379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1773174-1773383:-1:exon

position:1773174:-1
position: 1773174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1773383:-1
position: 1773383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1772394-1772506:-1:exon

position:1772394:-1
position: 1772394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1772506:-1
position: 1772506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1771603-1771696:-1:exon

position:1771603:-1
position: 1771603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1771696:-1
position: 1771696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1770384-1770417:-1:exon

position:1770384:-1
position: 1770384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1770417:-1
position: 1770417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1769348-1769522:-1:exon

position:1769348:-1
position: 1769348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1769522:-1
position: 1769522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1767813-1768001:-1:exon

position:1767813:-1
position: 1767813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1768001:-1
position: 1768001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1765935-1766993:-1:exon

position:1766993:-1
position: 1766993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110470663
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110470663
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: haloacid dehalogenase-like hydrolase domain-containing 5
translation: MRGPLAGRSGHSALSVLPSFGFLFDIDGVLVRGRTPIPAARTAFQKLVNSQGQFLVPVVFVTNAGDCLRQKKADQLSHLLGVPISQDQVMMSHSPLRMFKSYHEKCVLVSGQGPLLDIAQDLGFCQPITIDTLREKRPLLDAVDHDRRPNVLSPSAVELPKIEAVVLFGEPVRWETSLQLIIDVLLTSGYPGNPYGQENYPHIPVLACNMDLMWVAEAQSPRFGHGTFMVCLENIYKKITGKELKYEALMGKPSRLTYQYAEHLIRAQALQRSWEQPIQTLYAVGDNLMTDVYGANLYNRYLQESSRTGSKPRLQAKASAGRAPALLPQAHEPGLSWQNELAPAAAACCRSVLVCTGVYSPHGEVALPTRDSITENVFHGHRDFTFDPGLVEPDHIVPDVDAAVDLVFQLENFAPH
SIO_010081: LOC110470663
subclass of: SO_0000673
so part of: LOC110470663
location: complement(join(1766597..1766993,1767813..1768001,1769348..1769522,1770384..1770417,1771603..1771696,1772394..1772506,1773174..1773383,1775379..1775417))
location: region:1766597-1775417:-1
so has part: feature:1775379-1775417:-1:exon
so has part: feature:1773174-1773383:-1:exon
so has part: feature:1772394-1772506:-1:exon
so has part: feature:1771603-1771696:-1:exon
so has part: feature:1770384-1770417:-1:exon
so has part: feature:1769348-1769522:-1:exon
so has part: feature:1767813-1768001:-1:exon
so has part: feature:1766597-1766993:-1:exon

XP_021386155.1
type: Protein
SIO_000068: ncbiprotein

position:1766597:-1
position: 1766597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1775417:-1
position: 1775417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1775379-1775417:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1773174-1773383:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1772394-1772506:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1771603-1771696:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1770384-1770417:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1769348-1769522:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1767813-1768001:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1766597-1766993:-1:exon

ISY1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: ISY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1777871..1784259)
location: region:1777871-1784259:-1
so has part: feature:1777871-1784259:-1:exon
subclass of: SO_0000010

110470664
type: Gene
SIO_000068: ncbigene

position:1777871:-1
position: 1777871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1784259:-1
position: 1784259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1777871-1784259:-1:exon

ISY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ISY1
product: ISY1 splicing factor homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021530482.1
SIO_010081: ISY1
subclass of: SO_0000673
so part of: ISY1
location: complement(join(1777871..1778441,1778486..1778611,1778894..1778980,1779989..1780092,1780285..1780407,1781088..1781205,1781376..1781488,1781657..1781699,1782133..1782198,1782954..1783005,1783624..1783646,1784162..1784259))
location: region:1777871-1784259:-1
so has part: feature:1784162-1784259:-1:exon
so has part: feature:1783624-1783646:-1:exon
so has part: feature:1782954-1783005:-1:exon
so has part: feature:1782133-1782198:-1:exon
so has part: feature:1781657-1781699:-1:exon
so has part: feature:1781376-1781488:-1:exon
so has part: feature:1781088-1781205:-1:exon
so has part: feature:1780285-1780407:-1:exon
so has part: feature:1779989-1780092:-1:exon
so has part: feature:1778894-1778980:-1:exon
so has part: feature:1778486-1778611:-1:exon
so has part: feature:1777871-1778441:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1784162-1784259:-1:exon

position:1784162:-1
position: 1784162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1783624-1783646:-1:exon

position:1783624:-1
position: 1783624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1783646:-1
position: 1783646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1782954-1783005:-1:exon

position:1782954:-1
position: 1782954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1783005:-1
position: 1783005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1782133-1782198:-1:exon

position:1782133:-1
position: 1782133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1782198:-1
position: 1782198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1781657-1781699:-1:exon

position:1781657:-1
position: 1781657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1781699:-1
position: 1781699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1781376-1781488:-1:exon

position:1781376:-1
position: 1781376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1781488:-1
position: 1781488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1781088-1781205:-1:exon

position:1781088:-1
position: 1781088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1781205:-1
position: 1781205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1780285-1780407:-1:exon

position:1780285:-1
position: 1780285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1780407:-1
position: 1780407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1779989-1780092:-1:exon

position:1779989:-1
position: 1779989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1780092:-1
position: 1780092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1778894-1778980:-1:exon

position:1778894:-1
position: 1778894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1778980:-1
position: 1778980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1778486-1778611:-1:exon

position:1778486:-1
position: 1778486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1778611:-1
position: 1778611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1777871-1778441:-1:exon

position:1778441:-1
position: 1778441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ISY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ISY1
product: ISY1 splicing factor homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_021530481.1
SIO_010081: ISY1
subclass of: SO_0000673
so part of: ISY1
location: complement(join(1777871..1778611,1778894..1778980,1779989..1780092,1780285..1780407,1781088..1781205,1781376..1781488,1781657..1781699,1782133..1782198,1782954..1783005,1783624..1783646,1784162..1784259))
location: region:1777871-1784259:-1
so has part: feature:1784162-1784259:-1:exon
so has part: feature:1783624-1783646:-1:exon
so has part: feature:1782954-1783005:-1:exon
so has part: feature:1782133-1782198:-1:exon
so has part: feature:1781657-1781699:-1:exon
so has part: feature:1781376-1781488:-1:exon
so has part: feature:1781088-1781205:-1:exon
so has part: feature:1780285-1780407:-1:exon
so has part: feature:1779989-1780092:-1:exon
so has part: feature:1778894-1778980:-1:exon
so has part: feature:1777871-1778611:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1784162-1784259:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1783624-1783646:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1782954-1783005:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1782133-1782198:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1781657-1781699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1781376-1781488:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1781088-1781205:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1780285-1780407:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1779989-1780092:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1778894-1778980:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1777871-1778611:-1:exon

ISY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ISY1
product: ISY1 splicing factor homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_021530484.1
SIO_010081: ISY1
subclass of: SO_0000673
so part of: ISY1
location: complement(join(1777871..1778611,1778894..1778980,1779989..1780092,1780285..1780407,1781088..1781205,1781376..1781488,1781657..1781699,1782133..1782198,1782954..1783005,1783624..1783646,1784112..1784140))
location: region:1777871-1784140:-1
so has part: feature:1784112-1784140:-1:exon
so has part: feature:1783624-1783646:-1:exon
so has part: feature:1782954-1783005:-1:exon
so has part: feature:1782133-1782198:-1:exon
so has part: feature:1781657-1781699:-1:exon
so has part: feature:1781376-1781488:-1:exon
so has part: feature:1781088-1781205:-1:exon
so has part: feature:1780285-1780407:-1:exon
so has part: feature:1779989-1780092:-1:exon
so has part: feature:1778894-1778980:-1:exon
so has part: feature:1777871-1778611:-1:exon

position:1784140:-1
position: 1784140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1784112-1784140:-1:exon

position:1784112:-1
position: 1784112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1783624-1783646:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1782954-1783005:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1782133-1782198:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1781657-1781699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1781376-1781488:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1781088-1781205:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1780285-1780407:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1779989-1780092:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1778894-1778980:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1777871-1778611:-1:exon

ISY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ISY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor ISY1 homolog isoform X1
translation: MARNAEKAMTALARFRQAQLEEGKVKERRPFLASECNELPKAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEYRIKELGGPDYARIGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKDIDAEYYGYRDEDDGILEPLEQEHEKKVIAEAVEKWKMEREARLARGEEEEEENIYAVHEEESDEEGGKEREGEDGQQKFIAHVPVPTQKEIEEALVRRKKMELLQKYASETLLAQSEEAKTLLGL
SIO_010081: ISY1
subclass of: SO_0000673
so part of: ISY1
location: complement(join(1778504..1778611,1778894..1778980,1779989..1780092,1780285..1780407,1781088..1781205,1781376..1781488,1781657..1781699,1782133..1782198,1782954..1783005,1783624..1783646,1784162..1784164))
location: region:1778504-1784164:-1
so has part: feature:1784162-1784164:-1:exon
so has part: feature:1783624-1783646:-1:exon
so has part: feature:1782954-1783005:-1:exon
so has part: feature:1782133-1782198:-1:exon
so has part: feature:1781657-1781699:-1:exon
so has part: feature:1781376-1781488:-1:exon
so has part: feature:1781088-1781205:-1:exon
so has part: feature:1780285-1780407:-1:exon
so has part: feature:1779989-1780092:-1:exon
so has part: feature:1778894-1778980:-1:exon
so has part: feature:1778504-1778611:-1:exon

XP_021386156.1
type: Protein
SIO_000068: ncbiprotein

position:1778504:-1
position: 1778504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1784164:-1
position: 1784164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1784162-1784164:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1783624-1783646:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1782954-1783005:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1782133-1782198:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1781657-1781699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1781376-1781488:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1781088-1781205:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1780285-1780407:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1779989-1780092:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1778894-1778980:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1778504-1778611:-1:exon

ISY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ISY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor ISY1 homolog isoform X1
translation: MARNAEKAMTALARFRQAQLEEGKVKERRPFLASECNELPKAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEYRIKELGGPDYARIGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKDIDAEYYGYRDEDDGILEPLEQEHEKKVIAEAVEKWKMEREARLARGEEEEEENIYAVHEEESDEEGGKEREGEDGQQKFIAHVPVPTQKEIEEALVRRKKMELLQKYASETLLAQSEEAKTLLGL
SIO_010081: ISY1
subclass of: SO_0000673
so part of: ISY1
location: complement(join(1778504..1778611,1778894..1778980,1779989..1780092,1780285..1780407,1781088..1781205,1781376..1781488,1781657..1781699,1782133..1782198,1782954..1783005,1783624..1783646,1784162..1784164))
location: region:1778504-1784164:-1
so has part: feature:1784162-1784164:-1:exon
so has part: feature:1783624-1783646:-1:exon
so has part: feature:1782954-1783005:-1:exon
so has part: feature:1782133-1782198:-1:exon
so has part: feature:1781657-1781699:-1:exon
so has part: feature:1781376-1781488:-1:exon
so has part: feature:1781088-1781205:-1:exon
so has part: feature:1780285-1780407:-1:exon
so has part: feature:1779989-1780092:-1:exon
so has part: feature:1778894-1778980:-1:exon
so has part: feature:1778504-1778611:-1:exon

XP_021386157.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1784162-1784164:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1783624-1783646:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1782954-1783005:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1782133-1782198:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1781657-1781699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1781376-1781488:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1781088-1781205:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1780285-1780407:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1779989-1780092:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1778894-1778980:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1778504-1778611:-1:exon

ISY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ISY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor ISY1 homolog isoform X2
translation: MARNAEKAMTALARFRQAQLEEGKVKERRPFLASECNELPKAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEYRIKELGGPDYARIGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKDIDAEYYGYRDEDDGILEPLEQEHEKKVIAEAVEKWKMEREARLARGEEEEEENIYAVHEEESDEEGGKEREGEDGQQKFIAHVPVPTQKEIEEALVRRKKMELLQKYASETLLAQSEEAKTLLGL
SIO_010081: ISY1
subclass of: SO_0000673
so part of: ISY1
location: complement(join(1778504..1778611,1778894..1778980,1779989..1780092,1780285..1780407,1781088..1781205,1781376..1781488,1781657..1781699,1782133..1782198,1782954..1783005,1783624..1783646,1784112..1784114))
location: region:1778504-1784114:-1
so has part: feature:1784112-1784114:-1:exon
so has part: feature:1783624-1783646:-1:exon
so has part: feature:1782954-1783005:-1:exon
so has part: feature:1782133-1782198:-1:exon
so has part: feature:1781657-1781699:-1:exon
so has part: feature:1781376-1781488:-1:exon
so has part: feature:1781088-1781205:-1:exon
so has part: feature:1780285-1780407:-1:exon
so has part: feature:1779989-1780092:-1:exon
so has part: feature:1778894-1778980:-1:exon
so has part: feature:1778504-1778611:-1:exon

XP_021386159.1
type: Protein
SIO_000068: ncbiprotein

position:1784114:-1
position: 1784114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1784112-1784114:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1783624-1783646:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1782954-1783005:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1782133-1782198:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1781657-1781699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1781376-1781488:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1781088-1781205:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1780285-1780407:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1779989-1780092:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1778894-1778980:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1778504-1778611:-1:exon

CNBP
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: CNBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1785859..1794719)
location: region:1785859-1794719:-1
so has part: feature:1785859-1794719:-1:exon
subclass of: SO_0000010

110470646
type: Gene
SIO_000068: ncbigene

position:1785859:-1
position: 1785859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1794719:-1
position: 1794719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1785859-1794719:-1:exon

CNBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: CNBP
product: CCHC-type zinc finger nucleic acid binding protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_021530445.2
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(1785859..1786839,1787696..1787897,1788071..1788166,1788438..1788557,1794584..1794719))
location: region:1785859-1794719:-1
so has part: feature:1794584-1794719:-1:exon
so has part: feature:1788438-1788557:-1:exon
so has part: feature:1788071-1788166:-1:exon
so has part: feature:1787696-1787897:-1:exon
so has part: feature:1785859-1786839:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1794584-1794719:-1:exon

position:1794584:-1
position: 1794584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1788438-1788557:-1:exon

position:1788438:-1
position: 1788438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1788557:-1
position: 1788557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1788071-1788166:-1:exon

position:1788071:-1
position: 1788071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1788166:-1
position: 1788166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1787696-1787897:-1:exon

position:1787696:-1
position: 1787696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1787897:-1
position: 1787897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1785859-1786839:-1:exon

position:1786839:-1
position: 1786839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CNBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: CNBP
product: CCHC-type zinc finger nucleic acid binding protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_021530446.2
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(1785859..1786839,1787696..1787897,1788071..1788163,1788438..1788557,1794584..1794717))
location: region:1785859-1794717:-1
so has part: feature:1794584-1794717:-1:exon
so has part: feature:1788438-1788557:-1:exon
so has part: feature:1788071-1788163:-1:exon
so has part: feature:1787696-1787897:-1:exon
so has part: feature:1785859-1786839:-1:exon

position:1794717:-1
position: 1794717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1794584-1794717:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1788438-1788557:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1788071-1788163:-1:exon

position:1788163:-1
position: 1788163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1787696-1787897:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1785859-1786839:-1:exon

CNBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: CNBP
product: CCHC-type zinc finger nucleic acid binding protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 64 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_021530449.2
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(1785859..1786839,1787696..1787894,1788071..1788163,1788438..1788557,1794584..1794716))
location: region:1785859-1794716:-1
so has part: feature:1794584-1794716:-1:exon
so has part: feature:1788438-1788557:-1:exon
so has part: feature:1788071-1788163:-1:exon
so has part: feature:1787696-1787894:-1:exon
so has part: feature:1785859-1786839:-1:exon

position:1794716:-1
position: 1794716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1794584-1794716:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1788438-1788557:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1788071-1788163:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1787696-1787894:-1:exon

position:1787894:-1
position: 1787894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1785859-1786839:-1:exon

CNBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: CNBP
product: CCHC-type zinc finger nucleic acid binding protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 61 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_021530447.1
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(1785860..1786839,1787696..1787894,1788071..1788166,1788438..1788557,1794584..1794717))
location: region:1785860-1794717:-1
so has part: feature:1794584-1794717:-1:exon
so has part: feature:1788438-1788557:-1:exon
so has part: feature:1788071-1788166:-1:exon
so has part: feature:1787696-1787894:-1:exon
so has part: feature:1785860-1786839:-1:exon

position:1785860:-1
position: 1785860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1794584-1794717:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1788438-1788557:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1788071-1788166:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1787696-1787894:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1785860-1786839:-1:exon

CNBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: CNBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cellular nucleic acid-binding protein isoform X4
translation: MSSNECFKCGRTGHWARECPTGMGRGRGMRSRGRGFQFMSSSLPDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(1786722..1786839,1787696..1787894,1788071..1788163,1788438..1788540))
location: region:1786722-1788540:-1
so has part: feature:1788438-1788540:-1:exon
so has part: feature:1788071-1788163:-1:exon
so has part: feature:1787696-1787894:-1:exon
so has part: feature:1786722-1786839:-1:exon

XP_021386124.1
type: Protein
SIO_000068: ncbiprotein

position:1786722:-1
position: 1786722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1788540:-1
position: 1788540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1788438-1788540:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1788071-1788163:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1787696-1787894:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1786722-1786839:-1:exon

CNBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: CNBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cellular nucleic acid-binding protein isoform X2
translation: MSSNECFKCGRTGHWARECPTGMGRGRGMRSRGRGFQFMSSSLPDICYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(1786722..1786839,1787696..1787897,1788071..1788163,1788438..1788540))
location: region:1786722-1788540:-1
so has part: feature:1788438-1788540:-1:exon
so has part: feature:1788071-1788163:-1:exon
so has part: feature:1787696-1787897:-1:exon
so has part: feature:1786722-1786839:-1:exon

XP_021386121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1788438-1788540:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1788071-1788163:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1787696-1787897:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1786722-1786839:-1:exon

CNBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: CNBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cellular nucleic acid-binding protein isoform X3
translation: MSSNECFKCGRTGHWARECPTGMGRGRGMRSRGRAGFQFMSSSLPDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(1786722..1786839,1787696..1787894,1788071..1788166,1788438..1788540))
location: region:1786722-1788540:-1
so has part: feature:1788438-1788540:-1:exon
so has part: feature:1788071-1788166:-1:exon
so has part: feature:1787696-1787894:-1:exon
so has part: feature:1786722-1786839:-1:exon

XP_021386122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1788438-1788540:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1788071-1788166:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1787696-1787894:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1786722-1786839:-1:exon

CNBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: CNBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cellular nucleic acid-binding protein isoform X1
translation: MSSNECFKCGRTGHWARECPTGMGRGRGMRSRGRAGFQFMSSSLPDICYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(1786722..1786839,1787696..1787897,1788071..1788166,1788438..1788540))
location: region:1786722-1788540:-1
so has part: feature:1788438-1788540:-1:exon
so has part: feature:1788071-1788166:-1:exon
so has part: feature:1787696-1787897:-1:exon
so has part: feature:1786722-1786839:-1:exon

XP_021386120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1788438-1788540:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1788071-1788166:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1787696-1787897:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1786722-1786839:-1:exon

LOC110470668
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110470668
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1802885..1803673)
location: region:1802885-1803673:-1
so has part: feature:1802885-1803673:-1:exon

110470668
type: Gene
SIO_000068: ncbigene

position:1802885:-1
position: 1802885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1803673:-1
position: 1803673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1802885-1803673:-1:exon

LOC110470668
type: Exon
subclass of: SO_0000147
RO_0002162: 299123
gene: LOC110470668
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC110470668
subclass of: SO_0000673
so part of: LOC110470668
location: complement(1802885..1802935)
location: region:1802885-1802935:-1
so has part: feature:1802885-1802935:-1:exon

position:1802935:-1
position: 1802935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1802885-1802935:-1:exon

LOC110470668
type: Exon
subclass of: SO_0000147
RO_0002162: 299123
gene: LOC110470668
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC110470668
subclass of: SO_0000673
so part of: LOC110470668
location: complement(1803240..1803673)
location: region:1803240-1803673:-1
so has part: feature:1803240-1803673:-1:exon

position:1803240:-1
position: 1803240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1803240-1803673:-1:exon

RAF1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: RAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1852507..1891496
location: region:1852507-1891496:1
so has part: feature:1852507-1891496:1:exon
subclass of: SO_0000010

110470647
type: Gene
SIO_000068: ncbigene

position:1852507:1
position: 1852507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1891496:1
position: 1891496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1852507-1891496:1:exon

RAF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: RAF1
product: Raf-1 proto-oncogene, serine/threonine kinase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021530451.2
SIO_010081: RAF1
subclass of: SO_0000673
so part of: RAF1
location: join(1852507..1852519,1862997..1863052,1871142..1871357,1872050..1872162,1873144..1873246,1874815..1874972,1875900..1875998,1877427..1877580,1879032..1879091,1880829..1880856,1880948..1881075,1882107..1882224,1883523..1883607,1884456..1884632,1885198..1885244,1886561..1886679,1887910..1888041,1889105..1889239,1890441..1891496)
location: region:1852507-1891496:1
so has part: feature:1852507-1852519:1:exon
so has part: feature:1862997-1863052:1:exon
so has part: feature:1871142-1871357:1:exon
so has part: feature:1872050-1872162:1:exon
so has part: feature:1873144-1873246:1:exon
so has part: feature:1874815-1874972:1:exon
so has part: feature:1875900-1875998:1:exon
so has part: feature:1877427-1877580:1:exon
so has part: feature:1879032-1879091:1:exon
so has part: feature:1880829-1880856:1:exon
so has part: feature:1880948-1881075:1:exon
so has part: feature:1882107-1882224:1:exon
so has part: feature:1883523-1883607:1:exon
so has part: feature:1884456-1884632:1:exon
so has part: feature:1885198-1885244:1:exon
so has part: feature:1886561-1886679:1:exon
so has part: feature:1887910-1888041:1:exon
so has part: feature:1889105-1889239:1:exon
so has part: feature:1890441-1891496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1852507-1852519:1:exon

position:1852519:1
position: 1852519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1862997-1863052:1:exon

position:1862997:1
position: 1862997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1863052:1
position: 1863052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1871142-1871357:1:exon

position:1871142:1
position: 1871142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1871357:1
position: 1871357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1872050-1872162:1:exon

position:1872050:1
position: 1872050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1872162:1
position: 1872162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1873144-1873246:1:exon

position:1873144:1
position: 1873144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1873246:1
position: 1873246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1874815-1874972:1:exon

position:1874815:1
position: 1874815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1874972:1
position: 1874972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1875900-1875998:1:exon

position:1875900:1
position: 1875900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1875998:1
position: 1875998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1877427-1877580:1:exon

position:1877427:1
position: 1877427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1877580:1
position: 1877580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1879032-1879091:1:exon

position:1879032:1
position: 1879032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1879091:1
position: 1879091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1880829-1880856:1:exon

position:1880829:1
position: 1880829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1880856:1
position: 1880856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1880948-1881075:1:exon

position:1880948:1
position: 1880948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1881075:1
position: 1881075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1882107-1882224:1:exon

position:1882107:1
position: 1882107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1882224:1
position: 1882224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1883523-1883607:1:exon

position:1883523:1
position: 1883523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1883607:1
position: 1883607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1884456-1884632:1:exon

position:1884456:1
position: 1884456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1884632:1
position: 1884632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1885198-1885244:1:exon

position:1885198:1
position: 1885198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1885244:1
position: 1885244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1886561-1886679:1:exon

position:1886561:1
position: 1886561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1886679:1
position: 1886679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1887910-1888041:1:exon

position:1887910:1
position: 1887910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1888041:1
position: 1888041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1889105-1889239:1:exon

position:1889105:1
position: 1889105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1889239:1
position: 1889239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1890441-1891496:1:exon

position:1890441:1
position: 1890441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: RAF1
product: Raf-1 proto-oncogene, serine/threonine kinase, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021530450.2
SIO_010081: RAF1
subclass of: SO_0000673
so part of: RAF1
location: join(1853507..1853630,1862997..1863052,1871142..1871357,1872050..1872162,1873144..1873246,1874815..1874972,1875900..1875998,1877427..1877580,1879032..1879091,1880829..1880856,1880948..1881075,1882107..1882224,1883523..1883607,1884456..1884632,1885198..1885244,1886561..1886679,1887910..1888041,1889105..1889239,1890441..1891496)
location: region:1853507-1891496:1
so has part: feature:1853507-1853630:1:exon
so has part: feature:1862997-1863052:1:exon
so has part: feature:1871142-1871357:1:exon
so has part: feature:1872050-1872162:1:exon
so has part: feature:1873144-1873246:1:exon
so has part: feature:1874815-1874972:1:exon
so has part: feature:1875900-1875998:1:exon
so has part: feature:1877427-1877580:1:exon
so has part: feature:1879032-1879091:1:exon
so has part: feature:1880829-1880856:1:exon
so has part: feature:1880948-1881075:1:exon
so has part: feature:1882107-1882224:1:exon
so has part: feature:1883523-1883607:1:exon
so has part: feature:1884456-1884632:1:exon
so has part: feature:1885198-1885244:1:exon
so has part: feature:1886561-1886679:1:exon
so has part: feature:1887910-1888041:1:exon
so has part: feature:1889105-1889239:1:exon
so has part: feature:1890441-1891496:1:exon

position:1853507:1
position: 1853507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1853507-1853630:1:exon

position:1853630:1
position: 1853630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1862997-1863052:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1871142-1871357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1872050-1872162:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1873144-1873246:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1874815-1874972:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1875900-1875998:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1877427-1877580:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1879032-1879091:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1880829-1880856:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1880948-1881075:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1882107-1882224:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1883523-1883607:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1884456-1884632:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1885198-1885244:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1886561-1886679:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1887910-1888041:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1889105-1889239:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1890441-1891496:1:exon

RAF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: RAF1
product: Raf-1 proto-oncogene, serine/threonine kinase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 ESTs, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021530452.2
SIO_010081: RAF1
subclass of: SO_0000673
so part of: RAF1
location: join(1853579..1853630,1862997..1863052,1871142..1871357,1872050..1872162,1873144..1873246,1874815..1874972,1875900..1875998,1877427..1877580,1880829..1880856,1880948..1881075,1882107..1882224,1883523..1883607,1884456..1884632,1885198..1885244,1886561..1886679,1887910..1888041,1889105..1889239,1890441..1891496)
location: region:1853579-1891496:1
so has part: feature:1853579-1853630:1:exon
so has part: feature:1862997-1863052:1:exon
so has part: feature:1871142-1871357:1:exon
so has part: feature:1872050-1872162:1:exon
so has part: feature:1873144-1873246:1:exon
so has part: feature:1874815-1874972:1:exon
so has part: feature:1875900-1875998:1:exon
so has part: feature:1877427-1877580:1:exon
so has part: feature:1880829-1880856:1:exon
so has part: feature:1880948-1881075:1:exon
so has part: feature:1882107-1882224:1:exon
so has part: feature:1883523-1883607:1:exon
so has part: feature:1884456-1884632:1:exon
so has part: feature:1885198-1885244:1:exon
so has part: feature:1886561-1886679:1:exon
so has part: feature:1887910-1888041:1:exon
so has part: feature:1889105-1889239:1:exon
so has part: feature:1890441-1891496:1:exon

position:1853579:1
position: 1853579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1853579-1853630:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1862997-1863052:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1871142-1871357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1872050-1872162:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1873144-1873246:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1874815-1874972:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1875900-1875998:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1877427-1877580:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1880829-1880856:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1880948-1881075:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1882107-1882224:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1883523-1883607:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1884456-1884632:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1885198-1885244:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1886561-1886679:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1887910-1888041:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1889105-1889239:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1890441-1891496:1:exon

RAF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: RAF1
product: Raf-1 proto-oncogene, serine/threonine kinase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021530453.2
SIO_010081: RAF1
subclass of: SO_0000673
so part of: RAF1
location: join(1853579..1853630,1862997..1863052,1871142..1871357,1872050..1872162,1873144..1873246,1874815..1874972,1877427..1877580,1879032..1879091,1880829..1880856,1880948..1881075,1882107..1882224,1883523..1883607,1884456..1884632,1885198..1885244,1886561..1886679,1887910..1888041,1889105..1889239,1890441..1891496)
location: region:1853579-1891496:1
so has part: feature:1853579-1853630:1:exon
so has part: feature:1862997-1863052:1:exon
so has part: feature:1871142-1871357:1:exon
so has part: feature:1872050-1872162:1:exon
so has part: feature:1873144-1873246:1:exon
so has part: feature:1874815-1874972:1:exon
so has part: feature:1877427-1877580:1:exon
so has part: feature:1879032-1879091:1:exon
so has part: feature:1880829-1880856:1:exon
so has part: feature:1880948-1881075:1:exon
so has part: feature:1882107-1882224:1:exon
so has part: feature:1883523-1883607:1:exon
so has part: feature:1884456-1884632:1:exon
so has part: feature:1885198-1885244:1:exon
so has part: feature:1886561-1886679:1:exon
so has part: feature:1887910-1888041:1:exon
so has part: feature:1889105-1889239:1:exon
so has part: feature:1890441-1891496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1853579-1853630:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1862997-1863052:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1871142-1871357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1872050-1872162:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1873144-1873246:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1874815-1874972:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1877427-1877580:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1879032-1879091:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1880829-1880856:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1880948-1881075:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1882107-1882224:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1883523-1883607:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1884456-1884632:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1885198-1885244:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1886561-1886679:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1887910-1888041:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1889105-1889239:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1890441-1891496:1:exon

RAF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: RAF1
product: Raf-1 proto-oncogene, serine/threonine kinase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_031505991.1
SIO_010081: RAF1
subclass of: SO_0000673
so part of: RAF1
location: join(1853579..1853630,1862997..1863052,1871142..1871357,1872050..1872162,1873144..1873246,1874815..1874972,1877427..1877580,1880829..1880856,1880948..1881075,1882107..1882224,1883523..1883607,1884456..1884632,1885198..1885244,1886561..1886679,1887910..1888041,1889105..1889239,1890441..1891496)
location: region:1853579-1891496:1
so has part: feature:1853579-1853630:1:exon
so has part: feature:1862997-1863052:1:exon
so has part: feature:1871142-1871357:1:exon
so has part: feature:1872050-1872162:1:exon
so has part: feature:1873144-1873246:1:exon
so has part: feature:1874815-1874972:1:exon
so has part: feature:1877427-1877580:1:exon
so has part: feature:1880829-1880856:1:exon
so has part: feature:1880948-1881075:1:exon
so has part: feature:1882107-1882224:1:exon
so has part: feature:1883523-1883607:1:exon
so has part: feature:1884456-1884632:1:exon
so has part: feature:1885198-1885244:1:exon
so has part: feature:1886561-1886679:1:exon
so has part: feature:1887910-1888041:1:exon
so has part: feature:1889105-1889239:1:exon
so has part: feature:1890441-1891496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1853579-1853630:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1862997-1863052:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1871142-1871357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1872050-1872162:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1873144-1873246:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1874815-1874972:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1877427-1877580:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1880829-1880856:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1880948-1881075:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1882107-1882224:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1883523-1883607:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1884456-1884632:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1885198-1885244:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1886561-1886679:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1887910-1888041:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1889105-1889239:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1890441-1891496:1:exon

RAF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: RAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RAF proto-oncogene serine/threonine-protein kinase isoform X1
translation: MEHIQGAWKTISNGFGLKDSVFDGPSCISPTIVQQFGYQRRASDDGKISDTSKTSNTIRVFLPNKQRTVVNVRNGMTLHDCLMKALKVRGLQPECCAVFRLLAEPKGKKVRLDWNTDAASLIGEELRVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPTMCVDWSNIRQLLLFPNSNISDSGVPALPPLTMRRMRESVSRIPVSSQHRYSTPHAFTFNPSNPSSEGSLSQRQRSTSTPNVHMVSTTMPVDSRIIENNSLNASPSSWCRRFCLRGRDAIRSHSESASPSALSGSPNNMSPTGWSQPKTPVPAQRERAPGSNTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRMQDSNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCLKKVREERPLFPQILSSIELLQHSLPKINRSASEPSLHRAAHSEDINACTLTSTRLPVF
SIO_010081: RAF1
subclass of: SO_0000673
so part of: RAF1
location: join(1871151..1871357,1872050..1872162,1873144..1873246,1874815..1874972,1875900..1875998,1877427..1877580,1879032..1879091,1880829..1880856,1880948..1881075,1882107..1882224,1883523..1883607,1884456..1884632,1885198..1885244,1886561..1886679,1887910..1888041,1889105..1889239,1890441..1890581)
location: region:1871151-1890581:1
so has part: feature:1871151-1871357:1:exon
so has part: feature:1872050-1872162:1:exon
so has part: feature:1873144-1873246:1:exon
so has part: feature:1874815-1874972:1:exon
so has part: feature:1875900-1875998:1:exon
so has part: feature:1877427-1877580:1:exon
so has part: feature:1879032-1879091:1:exon
so has part: feature:1880829-1880856:1:exon
so has part: feature:1880948-1881075:1:exon
so has part: feature:1882107-1882224:1:exon
so has part: feature:1883523-1883607:1:exon
so has part: feature:1884456-1884632:1:exon
so has part: feature:1885198-1885244:1:exon
so has part: feature:1886561-1886679:1:exon
so has part: feature:1887910-1888041:1:exon
so has part: feature:1889105-1889239:1:exon
so has part: feature:1890441-1890581:1:exon

XP_021386125.1
type: Protein
SIO_000068: ncbiprotein

position:1871151:1
position: 1871151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1890581:1
position: 1890581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1871151-1871357:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1872050-1872162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1873144-1873246:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1874815-1874972:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1875900-1875998:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1877427-1877580:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1879032-1879091:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1880829-1880856:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1880948-1881075:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1882107-1882224:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1883523-1883607:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1884456-1884632:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1885198-1885244:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1886561-1886679:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1887910-1888041:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1889105-1889239:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1890441-1890581:1:exon

RAF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: RAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RAF proto-oncogene serine/threonine-protein kinase isoform X1
translation: MEHIQGAWKTISNGFGLKDSVFDGPSCISPTIVQQFGYQRRASDDGKISDTSKTSNTIRVFLPNKQRTVVNVRNGMTLHDCLMKALKVRGLQPECCAVFRLLAEPKGKKVRLDWNTDAASLIGEELRVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPTMCVDWSNIRQLLLFPNSNISDSGVPALPPLTMRRMRESVSRIPVSSQHRYSTPHAFTFNPSNPSSEGSLSQRQRSTSTPNVHMVSTTMPVDSRIIENNSLNASPSSWCRRFCLRGRDAIRSHSESASPSALSGSPNNMSPTGWSQPKTPVPAQRERAPGSNTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRMQDSNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCLKKVREERPLFPQILSSIELLQHSLPKINRSASEPSLHRAAHSEDINACTLTSTRLPVF
SIO_010081: RAF1
subclass of: SO_0000673
so part of: RAF1
location: join(1871151..1871357,1872050..1872162,1873144..1873246,1874815..1874972,1875900..1875998,1877427..1877580,1879032..1879091,1880829..1880856,1880948..1881075,1882107..1882224,1883523..1883607,1884456..1884632,1885198..1885244,1886561..1886679,1887910..1888041,1889105..1889239,1890441..1890581)
location: region:1871151-1890581:1
so has part: feature:1871151-1871357:1:exon
so has part: feature:1872050-1872162:1:exon
so has part: feature:1873144-1873246:1:exon
so has part: feature:1874815-1874972:1:exon
so has part: feature:1875900-1875998:1:exon
so has part: feature:1877427-1877580:1:exon
so has part: feature:1879032-1879091:1:exon
so has part: feature:1880829-1880856:1:exon
so has part: feature:1880948-1881075:1:exon
so has part: feature:1882107-1882224:1:exon
so has part: feature:1883523-1883607:1:exon
so has part: feature:1884456-1884632:1:exon
so has part: feature:1885198-1885244:1:exon
so has part: feature:1886561-1886679:1:exon
so has part: feature:1887910-1888041:1:exon
so has part: feature:1889105-1889239:1:exon
so has part: feature:1890441-1890581:1:exon

XP_021386126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1871151-1871357:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1872050-1872162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1873144-1873246:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1874815-1874972:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1875900-1875998:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1877427-1877580:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1879032-1879091:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1880829-1880856:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1880948-1881075:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1882107-1882224:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1883523-1883607:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1884456-1884632:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1885198-1885244:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1886561-1886679:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1887910-1888041:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1889105-1889239:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1890441-1890581:1:exon

RAF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: RAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RAF proto-oncogene serine/threonine-protein kinase isoform X2
translation: MEHIQGAWKTISNGFGLKDSVFDGPSCISPTIVQQFGYQRRASDDGKISDTSKTSNTIRVFLPNKQRTVVNVRNGMTLHDCLMKALKVRGLQPECCAVFRLLAEPKGKKVRLDWNTDAASLIGEELRVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPTMCVDWSNIRQLLLFPNSNISDSGVPALPPLTMRRMRESVSRIPVSSQHRYSTPHAFTFNPSNPSSEGSLSQRQRSTSTPNVHMVSTTMPVDSRIIEDAIRSHSESASPSALSGSPNNMSPTGWSQPKTPVPAQRERAPGSNTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRMQDSNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCLKKVREERPLFPQILSSIELLQHSLPKINRSASEPSLHRAAHSEDINACTLTSTRLPVF
SIO_010081: RAF1
subclass of: SO_0000673
so part of: RAF1
location: join(1871151..1871357,1872050..1872162,1873144..1873246,1874815..1874972,1875900..1875998,1877427..1877580,1880829..1880856,1880948..1881075,1882107..1882224,1883523..1883607,1884456..1884632,1885198..1885244,1886561..1886679,1887910..1888041,1889105..1889239,1890441..1890581)
location: region:1871151-1890581:1
so has part: feature:1871151-1871357:1:exon
so has part: feature:1872050-1872162:1:exon
so has part: feature:1873144-1873246:1:exon
so has part: feature:1874815-1874972:1:exon
so has part: feature:1875900-1875998:1:exon
so has part: feature:1877427-1877580:1:exon
so has part: feature:1880829-1880856:1:exon
so has part: feature:1880948-1881075:1:exon
so has part: feature:1882107-1882224:1:exon
so has part: feature:1883523-1883607:1:exon
so has part: feature:1884456-1884632:1:exon
so has part: feature:1885198-1885244:1:exon
so has part: feature:1886561-1886679:1:exon
so has part: feature:1887910-1888041:1:exon
so has part: feature:1889105-1889239:1:exon
so has part: feature:1890441-1890581:1:exon

XP_021386127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1871151-1871357:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1872050-1872162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1873144-1873246:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1874815-1874972:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1875900-1875998:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1877427-1877580:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1880829-1880856:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1880948-1881075:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1882107-1882224:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1883523-1883607:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1884456-1884632:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1885198-1885244:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1886561-1886679:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1887910-1888041:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1889105-1889239:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1890441-1890581:1:exon

RAF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: RAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RAF proto-oncogene serine/threonine-protein kinase isoform X3
translation: MEHIQGAWKTISNGFGLKDSVFDGPSCISPTIVQQFGYQRRASDDGKISDTSKTSNTIRVFLPNKQRTVVNVRNGMTLHDCLMKALKVRGLQPECCAVFRLLAEPKGKKVRLDWNTDAASLIGEELRVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPTMCVDWSNIRQLFSQHRYSTPHAFTFNPSNPSSEGSLSQRQRSTSTPNVHMVSTTMPVDSRIIENNSLNASPSSWCRRFCLRGRDAIRSHSESASPSALSGSPNNMSPTGWSQPKTPVPAQRERAPGSNTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRMQDSNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCLKKVREERPLFPQILSSIELLQHSLPKINRSASEPSLHRAAHSEDINACTLTSTRLPVF
SIO_010081: RAF1
subclass of: SO_0000673
so part of: RAF1
location: join(1871151..1871357,1872050..1872162,1873144..1873246,1874815..1874972,1877427..1877580,1879032..1879091,1880829..1880856,1880948..1881075,1882107..1882224,1883523..1883607,1884456..1884632,1885198..1885244,1886561..1886679,1887910..1888041,1889105..1889239,1890441..1890581)
location: region:1871151-1890581:1
so has part: feature:1871151-1871357:1:exon
so has part: feature:1872050-1872162:1:exon
so has part: feature:1873144-1873246:1:exon
so has part: feature:1874815-1874972:1:exon
so has part: feature:1877427-1877580:1:exon
so has part: feature:1879032-1879091:1:exon
so has part: feature:1880829-1880856:1:exon
so has part: feature:1880948-1881075:1:exon
so has part: feature:1882107-1882224:1:exon
so has part: feature:1883523-1883607:1:exon
so has part: feature:1884456-1884632:1:exon
so has part: feature:1885198-1885244:1:exon
so has part: feature:1886561-1886679:1:exon
so has part: feature:1887910-1888041:1:exon
so has part: feature:1889105-1889239:1:exon
so has part: feature:1890441-1890581:1:exon

XP_021386128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1871151-1871357:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1872050-1872162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1873144-1873246:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1874815-1874972:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1877427-1877580:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1879032-1879091:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1880829-1880856:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1880948-1881075:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1882107-1882224:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1883523-1883607:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1884456-1884632:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1885198-1885244:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1886561-1886679:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1887910-1888041:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1889105-1889239:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1890441-1890581:1:exon

RAF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: RAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RAF proto-oncogene serine/threonine-protein kinase isoform X4
translation: MEHIQGAWKTISNGFGLKDSVFDGPSCISPTIVQQFGYQRRASDDGKISDTSKTSNTIRVFLPNKQRTVVNVRNGMTLHDCLMKALKVRGLQPECCAVFRLLAEPKGKKVRLDWNTDAASLIGEELRVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPTMCVDWSNIRQLFSQHRYSTPHAFTFNPSNPSSEGSLSQRQRSTSTPNVHMVSTTMPVDSRIIEDAIRSHSESASPSALSGSPNNMSPTGWSQPKTPVPAQRERAPGSNTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRMQDSNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCLKKVREERPLFPQILSSIELLQHSLPKINRSASEPSLHRAAHSEDINACTLTSTRLPVF
SIO_010081: RAF1
subclass of: SO_0000673
so part of: RAF1
location: join(1871151..1871357,1872050..1872162,1873144..1873246,1874815..1874972,1877427..1877580,1880829..1880856,1880948..1881075,1882107..1882224,1883523..1883607,1884456..1884632,1885198..1885244,1886561..1886679,1887910..1888041,1889105..1889239,1890441..1890581)
location: region:1871151-1890581:1
so has part: feature:1871151-1871357:1:exon
so has part: feature:1872050-1872162:1:exon
so has part: feature:1873144-1873246:1:exon
so has part: feature:1874815-1874972:1:exon
so has part: feature:1877427-1877580:1:exon
so has part: feature:1880829-1880856:1:exon
so has part: feature:1880948-1881075:1:exon
so has part: feature:1882107-1882224:1:exon
so has part: feature:1883523-1883607:1:exon
so has part: feature:1884456-1884632:1:exon
so has part: feature:1885198-1885244:1:exon
so has part: feature:1886561-1886679:1:exon
so has part: feature:1887910-1888041:1:exon
so has part: feature:1889105-1889239:1:exon
so has part: feature:1890441-1890581:1:exon

XP_031361851.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1871151-1871357:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1872050-1872162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1873144-1873246:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1874815-1874972:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1877427-1877580:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1880829-1880856:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1880948-1881075:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1882107-1882224:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1883523-1883607:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1884456-1884632:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1885198-1885244:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1886561-1886679:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1887910-1888041:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1889105-1889239:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1890441-1890581:1:exon

MKRN2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: MKRN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1891396..1900312)
location: region:1891396-1900312:-1
so has part: feature:1891396-1900312:-1:exon
subclass of: SO_0000010

110470649
type: Gene
SIO_000068: ncbigene

position:1891396:-1
position: 1891396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1900312:-1
position: 1900312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1891396-1900312:-1:exon

MKRN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: MKRN2
product: makorin ring finger protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021530454.1
SIO_010081: MKRN2
subclass of: SO_0000673
so part of: MKRN2
location: complement(join(1891396..1894296,1894686..1894830,1895228..1895338,1896442..1896656,1897341..1897645,1898266..1898414,1899307..1899435,1900230..1900312))
location: region:1891396-1900312:-1
so has part: feature:1900230-1900312:-1:exon
so has part: feature:1899307-1899435:-1:exon
so has part: feature:1898266-1898414:-1:exon
so has part: feature:1897341-1897645:-1:exon
so has part: feature:1896442-1896656:-1:exon
so has part: feature:1895228-1895338:-1:exon
so has part: feature:1894686-1894830:-1:exon
so has part: feature:1891396-1894296:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1900230-1900312:-1:exon

position:1900230:-1
position: 1900230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1899307-1899435:-1:exon

position:1899307:-1
position: 1899307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1899435:-1
position: 1899435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1898266-1898414:-1:exon

position:1898266:-1
position: 1898266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1898414:-1
position: 1898414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1897341-1897645:-1:exon

position:1897341:-1
position: 1897341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1897645:-1
position: 1897645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1896442-1896656:-1:exon

position:1896442:-1
position: 1896442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1896656:-1
position: 1896656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1895228-1895338:-1:exon

position:1895228:-1
position: 1895228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1895338:-1
position: 1895338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1894686-1894830:-1:exon

position:1894686:-1
position: 1894686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1894830:-1
position: 1894830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1891396-1894296:-1:exon

position:1894296:-1
position: 1894296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MKRN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: MKRN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable E3 ubiquitin-protein ligase makorin-2
translation: MSTKQVTCRYFLQGVCREGSKCLFSHDLATSKSSTICKYYQKGQCAYGSRCRYDHVRLPPAGGAAAPPPSAAPGSPRAPPEPGPGAPRSRREKRTLVLRDRNLCGPSEDAQRPGGPGAGLCCGSPGDSQEDKPHSYLEAICSGLQEPGPGGCPGAAEQLCPYAAAGACHFGERCLYLHGELCEICGLQVLHPFDQEQRKAHEMMCMATFEHDMERAFAIQASQDKVCSICMEVVYEKPSASERRFGILSNCTHTYCLSCIRQWRCAKQFENPIIKSCPECRVISEFVIPSVYWVEEQEKKNELIEAFKQGVGKKPCKYFEQGKGTCPFGGKCLYLHAYPDGTRAEPEKPRKQLSSEGTVRFFNSVRLWDFIEDRESRSTPDAEVTELGELFMHLSGAEEDPTAAREHTQPL
SIO_010081: MKRN2
subclass of: SO_0000673
so part of: MKRN2
location: complement(join(1894141..1894296,1894686..1894830,1895228..1895338,1896442..1896656,1897341..1897645,1898266..1898414,1899307..1899435,1900230..1900255))
location: region:1894141-1900255:-1
so has part: feature:1900230-1900255:-1:exon
so has part: feature:1899307-1899435:-1:exon
so has part: feature:1898266-1898414:-1:exon
so has part: feature:1897341-1897645:-1:exon
so has part: feature:1896442-1896656:-1:exon
so has part: feature:1895228-1895338:-1:exon
so has part: feature:1894686-1894830:-1:exon
so has part: feature:1894141-1894296:-1:exon

XP_021386129.1
type: Protein
SIO_000068: ncbiprotein

position:1894141:-1
position: 1894141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1900255:-1
position: 1900255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1900230-1900255:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1899307-1899435:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1898266-1898414:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1897341-1897645:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1896442-1896656:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1895228-1895338:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1894686-1894830:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1894141-1894296:-1:exon

MKRN2OS
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: MKRN2OS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1900394..1904975
location: region:1900394-1904975:1
so has part: feature:1900394-1904975:1:exon
subclass of: SO_0000010

110470669
type: Gene
SIO_000068: ncbigene

position:1900394:1
position: 1900394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1904975:1
position: 1904975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1900394-1904975:1:exon

MKRN2OS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: MKRN2OS
product: MKRN2 opposite strand
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_031505933.1
SIO_010081: MKRN2OS
subclass of: SO_0000673
so part of: MKRN2OS
location: join(1900394..1900590,1900951..1901000,1902246..1902410,1904306..1904975)
location: region:1900394-1904975:1
so has part: feature:1900394-1900590:1:exon
so has part: feature:1900951-1901000:1:exon
so has part: feature:1902246-1902410:1:exon
so has part: feature:1904306-1904975:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1900394-1900590:1:exon

position:1900590:1
position: 1900590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1900951-1901000:1:exon

position:1900951:1
position: 1900951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1901000:1
position: 1901000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1902246-1902410:1:exon

position:1902246:1
position: 1902246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1902410:1
position: 1902410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1904306-1904975:1:exon

position:1904306:1
position: 1904306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MKRN2OS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: MKRN2OS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MKRN2 opposite strand protein
translation: MALLRVRHCRALLYCRRAPPRCPACGGDLRAAGLAAAPVRLRCPFRHGHGQPRAFLIRPSRGNFLHDYRGHCDLHVGITNSQGLVYNYDQEGVHRAASGWEQCISIPLVQPDMWELLQHWDSLLEEFSLEEAWLPHRXEEQQHNCYTFALAFVNRVRQARGRAALSKGEFTQRFLLPHTSEASRYLALQQQLQHSDVYVVPLAEQQHHSAAGNHSLLE
SIO_010081: MKRN2OS
subclass of: SO_0000673
so part of: MKRN2OS
location: join(1900394..1900590,1900951..1901000,1902246..1902410,1904306..1904550)
location: region:1900394-1904550:1
so has part: feature:1900394-1900590:1:exon
so has part: feature:1900951-1901000:1:exon
so has part: feature:1902246-1902410:1:exon
so has part: feature:1904306-1904550:1:exon

XP_031361793.1
type: Protein
SIO_000068: ncbiprotein

position:1904550:1
position: 1904550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1900394-1900590:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1900951-1901000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1902246-1902410:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1904306-1904550:1:exon

TSEN2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TSEN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1905321..1914482)
location: region:1905321-1914482:-1
so has part: feature:1905321-1914482:-1:exon
subclass of: SO_0000010

110470650
type: Gene
SIO_000068: ncbigene

position:1905321:-1
position: 1905321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1914482:-1
position: 1914482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1905321-1914482:-1:exon

TSEN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TSEN2
product: tRNA splicing endonuclease subunit 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021530455.2
SIO_010081: TSEN2
subclass of: SO_0000673
so part of: TSEN2
location: complement(join(1905321..1905616,1906040..1906129,1906494..1906605,1907233..1907269,1908269..1908407,1909044..1909094,1909560..1909637,1909737..1910232,1911931..1911967,1912652..1912733,1913475..1913664,1914403..1914482))
location: region:1905321-1914482:-1
so has part: feature:1914403-1914482:-1:exon
so has part: feature:1913475-1913664:-1:exon
so has part: feature:1912652-1912733:-1:exon
so has part: feature:1911931-1911967:-1:exon
so has part: feature:1909737-1910232:-1:exon
so has part: feature:1909560-1909637:-1:exon
so has part: feature:1909044-1909094:-1:exon
so has part: feature:1908269-1908407:-1:exon
so has part: feature:1907233-1907269:-1:exon
so has part: feature:1906494-1906605:-1:exon
so has part: feature:1906040-1906129:-1:exon
so has part: feature:1905321-1905616:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1914403-1914482:-1:exon

position:1914403:-1
position: 1914403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1913475-1913664:-1:exon

position:1913475:-1
position: 1913475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1913664:-1
position: 1913664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1912652-1912733:-1:exon

position:1912652:-1
position: 1912652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1912733:-1
position: 1912733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1911931-1911967:-1:exon

position:1911931:-1
position: 1911931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1911967:-1
position: 1911967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1909737-1910232:-1:exon

position:1909737:-1
position: 1909737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1910232:-1
position: 1910232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1909560-1909637:-1:exon

position:1909560:-1
position: 1909560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1909637:-1
position: 1909637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1909044-1909094:-1:exon

position:1909044:-1
position: 1909044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1909094:-1
position: 1909094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1908269-1908407:-1:exon

position:1908269:-1
position: 1908269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1908407:-1
position: 1908407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1907233-1907269:-1:exon

position:1907233:-1
position: 1907233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1907269:-1
position: 1907269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1906494-1906605:-1:exon

position:1906494:-1
position: 1906494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1906605:-1
position: 1906605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1906040-1906129:-1:exon

position:1906040:-1
position: 1906040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1906129:-1
position: 1906129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1905321-1905616:-1:exon

position:1905616:-1
position: 1905616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TSEN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TSEN2
product: tRNA splicing endonuclease subunit 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021530456.2
SIO_010081: TSEN2
subclass of: SO_0000673
so part of: TSEN2
location: complement(join(1905321..1905616,1906040..1906129,1906494..1906605,1907233..1907269,1908269..1908407,1909044..1909094,1909560..1909637,1909737..1910232,1911931..1911967,1912652..1912733,1913475..1913664,1913981..1914059))
location: region:1905321-1914059:-1
so has part: feature:1913981-1914059:-1:exon
so has part: feature:1913475-1913664:-1:exon
so has part: feature:1912652-1912733:-1:exon
so has part: feature:1911931-1911967:-1:exon
so has part: feature:1909737-1910232:-1:exon
so has part: feature:1909560-1909637:-1:exon
so has part: feature:1909044-1909094:-1:exon
so has part: feature:1908269-1908407:-1:exon
so has part: feature:1907233-1907269:-1:exon
so has part: feature:1906494-1906605:-1:exon
so has part: feature:1906040-1906129:-1:exon
so has part: feature:1905321-1905616:-1:exon

position:1914059:-1
position: 1914059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1913981-1914059:-1:exon

position:1913981:-1
position: 1913981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1913475-1913664:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1912652-1912733:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1911931-1911967:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1909737-1910232:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1909560-1909637:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1909044-1909094:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1908269-1908407:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1907233-1907269:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1906494-1906605:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1906040-1906129:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1905321-1905616:-1:exon

TSEN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TSEN2
product: tRNA splicing endonuclease subunit 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021530458.2
SIO_010081: TSEN2
subclass of: SO_0000673
so part of: TSEN2
location: complement(join(1905321..1905616,1906040..1906129,1906494..1906605,1907233..1907269,1908269..1908407,1909044..1909094,1909560..1909637,1909737..1910232,1911931..1911967,1912652..1912733,1913430..1913539))
location: region:1905321-1913539:-1
so has part: feature:1913430-1913539:-1:exon
so has part: feature:1912652-1912733:-1:exon
so has part: feature:1911931-1911967:-1:exon
so has part: feature:1909737-1910232:-1:exon
so has part: feature:1909560-1909637:-1:exon
so has part: feature:1909044-1909094:-1:exon
so has part: feature:1908269-1908407:-1:exon
so has part: feature:1907233-1907269:-1:exon
so has part: feature:1906494-1906605:-1:exon
so has part: feature:1906040-1906129:-1:exon
so has part: feature:1905321-1905616:-1:exon

position:1913539:-1
position: 1913539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1913430-1913539:-1:exon

position:1913430:-1
position: 1913430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1912652-1912733:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1911931-1911967:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1909737-1910232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1909560-1909637:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1909044-1909094:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1908269-1908407:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1907233-1907269:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1906494-1906605:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1906040-1906129:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1905321-1905616:-1:exon

TSEN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TSEN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-splicing endonuclease subunit Sen2 isoform X1
translation: MAEAVFHPPRRKRRVFESYEAPFPVDVGGKDFRLCQAEIINNNVIVRNPEDIEQLYNKGYFGKGILSRSRPVFSISDPLLAAKWRGVNTNMPIITSQKYQRRVQWAQSVLQEQGLDSCSVTKILESYTKPLGLPFCRGAGAEHSCSRGGPGPGNAELCRRSAGREGAQSPEGHSQHPEEGGDAALDPGSGSRDQEQGDSREMAEGSCHRDPPVLCGYEGKQSPEQRAWEGMDSRECAPEYVLVEEEEEGSSCPEDGSTHAQENLVKKEVLVCRKNPFRIFEYLQLSLEEAFFLVYALGCLSIYYGEEPLSIVKLWEVFSEVKPDFKTTYMAYHYFRGKGWVPKVGLKYGTDLLLYRKGPPFYHASYSVIAELVDDNFEGSLRRPLSWMSLSGLNRTTANASKELMLCYLIRPSDMTAEEMSTPECMKRIKVQELIVSRWVSSRERSEQDEF
SIO_010081: TSEN2
subclass of: SO_0000673
so part of: TSEN2
location: complement(join(1905557..1905616,1906040..1906129,1906494..1906605,1907233..1907269,1908269..1908407,1909044..1909094,1909560..1909637,1909737..1910232,1911931..1911967,1912652..1912733,1913475..1913648))
location: region:1905557-1913648:-1
so has part: feature:1913475-1913648:-1:exon
so has part: feature:1912652-1912733:-1:exon
so has part: feature:1911931-1911967:-1:exon
so has part: feature:1909737-1910232:-1:exon
so has part: feature:1909560-1909637:-1:exon
so has part: feature:1909044-1909094:-1:exon
so has part: feature:1908269-1908407:-1:exon
so has part: feature:1907233-1907269:-1:exon
so has part: feature:1906494-1906605:-1:exon
so has part: feature:1906040-1906129:-1:exon
so has part: feature:1905557-1905616:-1:exon

XP_021386130.1
type: Protein
SIO_000068: ncbiprotein

position:1905557:-1
position: 1905557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1913648:-1
position: 1913648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1913475-1913648:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1912652-1912733:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1911931-1911967:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1909737-1910232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1909560-1909637:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1909044-1909094:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1908269-1908407:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1907233-1907269:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1906494-1906605:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1906040-1906129:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1905557-1905616:-1:exon

TSEN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TSEN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-splicing endonuclease subunit Sen2 isoform X1
translation: MAEAVFHPPRRKRRVFESYEAPFPVDVGGKDFRLCQAEIINNNVIVRNPEDIEQLYNKGYFGKGILSRSRPVFSISDPLLAAKWRGVNTNMPIITSQKYQRRVQWAQSVLQEQGLDSCSVTKILESYTKPLGLPFCRGAGAEHSCSRGGPGPGNAELCRRSAGREGAQSPEGHSQHPEEGGDAALDPGSGSRDQEQGDSREMAEGSCHRDPPVLCGYEGKQSPEQRAWEGMDSRECAPEYVLVEEEEEGSSCPEDGSTHAQENLVKKEVLVCRKNPFRIFEYLQLSLEEAFFLVYALGCLSIYYGEEPLSIVKLWEVFSEVKPDFKTTYMAYHYFRGKGWVPKVGLKYGTDLLLYRKGPPFYHASYSVIAELVDDNFEGSLRRPLSWMSLSGLNRTTANASKELMLCYLIRPSDMTAEEMSTPECMKRIKVQELIVSRWVSSRERSEQDEF
SIO_010081: TSEN2
subclass of: SO_0000673
so part of: TSEN2
location: complement(join(1905557..1905616,1906040..1906129,1906494..1906605,1907233..1907269,1908269..1908407,1909044..1909094,1909560..1909637,1909737..1910232,1911931..1911967,1912652..1912733,1913475..1913648))
location: region:1905557-1913648:-1
so has part: feature:1913475-1913648:-1:exon
so has part: feature:1912652-1912733:-1:exon
so has part: feature:1911931-1911967:-1:exon
so has part: feature:1909737-1910232:-1:exon
so has part: feature:1909560-1909637:-1:exon
so has part: feature:1909044-1909094:-1:exon
so has part: feature:1908269-1908407:-1:exon
so has part: feature:1907233-1907269:-1:exon
so has part: feature:1906494-1906605:-1:exon
so has part: feature:1906040-1906129:-1:exon
so has part: feature:1905557-1905616:-1:exon

XP_021386131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1913475-1913648:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1912652-1912733:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1911931-1911967:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1909737-1910232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1909560-1909637:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1909044-1909094:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1908269-1908407:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1907233-1907269:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1906494-1906605:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1906040-1906129:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1905557-1905616:-1:exon

TSEN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TSEN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-splicing endonuclease subunit Sen2 isoform X2
translation: MQGYFGKGILSRSRPVFSISDPLLAAKWRGVNTNMPIITSQKYQRRVQWAQSVLQEQGLDSCSVTKILESYTKPLGLPFCRGAGAEHSCSRGGPGPGNAELCRRSAGREGAQSPEGHSQHPEEGGDAALDPGSGSRDQEQGDSREMAEGSCHRDPPVLCGYEGKQSPEQRAWEGMDSRECAPEYVLVEEEEEGSSCPEDGSTHAQENLVKKEVLVCRKNPFRIFEYLQLSLEEAFFLVYALGCLSIYYGEEPLSIVKLWEVFSEVKPDFKTTYMAYHYFRGKGWVPKVGLKYGTDLLLYRKGPPFYHASYSVIAELVDDNFEGSLRRPLSWMSLSGLNRTTANASKELMLCYLIRPSDMTAEEMSTPECMKRIKVQELIVSRWVSSRERSEQDEF
SIO_010081: TSEN2
subclass of: SO_0000673
so part of: TSEN2
location: complement(join(1905557..1905616,1906040..1906129,1906494..1906605,1907233..1907269,1908269..1908407,1909044..1909094,1909560..1909637,1909737..1910232,1911931..1911967,1912652..1912733,1913430..1913435))
location: region:1905557-1913435:-1
so has part: feature:1913430-1913435:-1:exon
so has part: feature:1912652-1912733:-1:exon
so has part: feature:1911931-1911967:-1:exon
so has part: feature:1909737-1910232:-1:exon
so has part: feature:1909560-1909637:-1:exon
so has part: feature:1909044-1909094:-1:exon
so has part: feature:1908269-1908407:-1:exon
so has part: feature:1907233-1907269:-1:exon
so has part: feature:1906494-1906605:-1:exon
so has part: feature:1906040-1906129:-1:exon
so has part: feature:1905557-1905616:-1:exon

XP_021386133.1
type: Protein
SIO_000068: ncbiprotein

position:1913435:-1
position: 1913435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1913430-1913435:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1912652-1912733:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1911931-1911967:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1909737-1910232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1909560-1909637:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1909044-1909094:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1908269-1908407:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1907233-1907269:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1906494-1906605:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1906040-1906129:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1905557-1905616:-1:exon

TSEN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TSEN2
product: tRNA splicing endonuclease subunit 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031505932.1
SIO_010081: TSEN2
subclass of: SO_0000673
so part of: TSEN2
location: complement(join(1907311..1908407,1909044..1909094,1909560..1909637,1909737..1910232,1911931..1911967,1912652..1912733,1913475..1913664,1914403..1914482))
location: region:1907311-1914482:-1
so has part: feature:1914403-1914482:-1:exon
so has part: feature:1913475-1913664:-1:exon
so has part: feature:1912652-1912733:-1:exon
so has part: feature:1911931-1911967:-1:exon
so has part: feature:1909737-1910232:-1:exon
so has part: feature:1909560-1909637:-1:exon
so has part: feature:1909044-1909094:-1:exon
so has part: feature:1907311-1908407:-1:exon

position:1907311:-1
position: 1907311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1914403-1914482:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1913475-1913664:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1912652-1912733:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1911931-1911967:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1909737-1910232:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1909560-1909637:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1909044-1909094:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1907311-1908407:-1:exon

TSEN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TSEN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-splicing endonuclease subunit Sen2 isoform X3
translation: MAEAVFHPPRRKRRVFESYEAPFPVDVGGKDFRLCQAEIINNNVIVRNPEDIEQLYNKGYFGKGILSRSRPVFSISDPLLAAKWRGVNTNMPIITSQKYQRRVQWAQSVLQEQGLDSCSVTKILESYTKPLGLPFCRGAGAEHSCSRGGPGPGNAELCRRSAGREGAQSPEGHSQHPEEGGDAALDPGSGSRDQEQGDSREMAEGSCHRDPPVLCGYEGKQSPEQRAWEGMDSRECAPEYVLVEEEEEGSSCPEDGSTHAQENLVKKEVLVCRKNPFRIFEYLQLSLEEAFFLVYALGCLSIYYGEEPLSIVKLWEVFSEVKPDFKTTYMAYHYFRGKGWVPKVGLKYGTDLCEYLPKNGIISFSPLLQARQNCR
SIO_010081: TSEN2
subclass of: SO_0000673
so part of: TSEN2
location: complement(join(1908198..1908407,1909044..1909094,1909560..1909637,1909737..1910232,1911931..1911967,1912652..1912733,1913475..1913648))
location: region:1908198-1913648:-1
so has part: feature:1913475-1913648:-1:exon
so has part: feature:1912652-1912733:-1:exon
so has part: feature:1911931-1911967:-1:exon
so has part: feature:1909737-1910232:-1:exon
so has part: feature:1909560-1909637:-1:exon
so has part: feature:1909044-1909094:-1:exon
so has part: feature:1908198-1908407:-1:exon

XP_031361792.1
type: Protein
SIO_000068: ncbiprotein

position:1908198:-1
position: 1908198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1913475-1913648:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1912652-1912733:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1911931-1911967:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1909737-1910232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1909560-1909637:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1909044-1909094:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1908198-1908407:-1:exon

PPARG
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: PPARG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1947876..1967273)
location: region:1947876-1967273:-1
so has part: feature:1947876-1967273:-1:exon
subclass of: SO_0000010

110470665
type: Gene
SIO_000068: ncbigene

position:1947876:-1
position: 1947876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1967273:-1
position: 1967273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1947876-1967273:-1:exon

PPARG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PPARG
product: peroxisome proliferator activated receptor gamma
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 1 EST, 51 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021530485.2
SIO_010081: PPARG
subclass of: SO_0000673
so part of: PPARG
location: complement(join(1947876..1948471,1954902..1955352,1958394..1958593,1963099..1963237,1964604..1964773,1967054..1967273))
location: region:1947876-1967273:-1
so has part: feature:1967054-1967273:-1:exon
so has part: feature:1964604-1964773:-1:exon
so has part: feature:1963099-1963237:-1:exon
so has part: feature:1958394-1958593:-1:exon
so has part: feature:1954902-1955352:-1:exon
so has part: feature:1947876-1948471:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1967054-1967273:-1:exon

position:1967054:-1
position: 1967054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1964604-1964773:-1:exon

position:1964604:-1
position: 1964604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1964773:-1
position: 1964773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1963099-1963237:-1:exon

position:1963099:-1
position: 1963099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1963237:-1
position: 1963237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1958394-1958593:-1:exon

position:1958394:-1
position: 1958394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1958593:-1
position: 1958593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1954902-1955352:-1:exon

position:1954902:-1
position: 1954902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1955352:-1
position: 1955352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1947876-1948471:-1:exon

position:1948471:-1
position: 1948471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPARG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PPARG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxisome proliferator-activated receptor gamma
translation: MVDTEMPFWPLNFGISPVDLSAMDDHTHSFDIKPFTTVDFSSISSPHYEDLPLARADQSSLDYKYDIKLQDCQSAIKLEPPSPPYFSEKVQLYNKPHEEASNSLMAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGKTTDKSPFVIYDMNSLMMGEDQIKCKHVSPLQEENKEVAIRIFQRCQFRSVEAVQEITEFAKNIPGFVNLDLNDQVTLLKYGVHEIIYTLLASLMNKDGVLISDGQGFMTREFLKSLRKPFCDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLY
SIO_010081: PPARG
subclass of: SO_0000673
so part of: PPARG
location: complement(join(1948224..1948471,1954902..1955352,1958394..1958593,1963099..1963237,1964604..1964773,1967054..1967273))
location: region:1948224-1967273:-1
so has part: feature:1967054-1967273:-1:exon
so has part: feature:1964604-1964773:-1:exon
so has part: feature:1963099-1963237:-1:exon
so has part: feature:1958394-1958593:-1:exon
so has part: feature:1954902-1955352:-1:exon
so has part: feature:1948224-1948471:-1:exon

XP_021386160.1
type: Protein
SIO_000068: ncbiprotein

position:1948224:-1
position: 1948224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1967054-1967273:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1964604-1964773:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1963099-1963237:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1958394-1958593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1954902-1955352:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1948224-1948471:-1:exon

SYN2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SYN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2030720..2206350)
location: region:2030720-2206350:-1
so has part: feature:2030720-2206350:-1:exon
subclass of: SO_0000010

110470651
type: Gene
SIO_000068: ncbigene

position:2030720:-1
position: 2030720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2206350:-1
position: 2206350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2030720-2206350:-1:exon

SYN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SYN2
product: synapsin II
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021530459.1
SIO_010081: SYN2
subclass of: SO_0000673
so part of: SYN2
location: complement(join(2030720..2031750,2034273..2034528,2038259..2038319,2052661..2052810,2059270..2059372,2062869..2062943,2068119..2068261,2070680..2070742,2121172..2121261,2136824..2136980,2141996..2142087,2144567..2144624,2205874..2206350))
location: region:2030720-2206350:-1
so has part: feature:2205874-2206350:-1:exon
so has part: feature:2144567-2144624:-1:exon
so has part: feature:2141996-2142087:-1:exon
so has part: feature:2136824-2136980:-1:exon
so has part: feature:2121172-2121261:-1:exon
so has part: feature:2070680-2070742:-1:exon
so has part: feature:2068119-2068261:-1:exon
so has part: feature:2062869-2062943:-1:exon
so has part: feature:2059270-2059372:-1:exon
so has part: feature:2052661-2052810:-1:exon
so has part: feature:2038259-2038319:-1:exon
so has part: feature:2034273-2034528:-1:exon
so has part: feature:2030720-2031750:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2205874-2206350:-1:exon

position:2205874:-1
position: 2205874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2144567-2144624:-1:exon

position:2144567:-1
position: 2144567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2144624:-1
position: 2144624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2141996-2142087:-1:exon

position:2141996:-1
position: 2141996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2142087:-1
position: 2142087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2136824-2136980:-1:exon

position:2136824:-1
position: 2136824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2136980:-1
position: 2136980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2121172-2121261:-1:exon

position:2121172:-1
position: 2121172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2121261:-1
position: 2121261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2070680-2070742:-1:exon

position:2070680:-1
position: 2070680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2070742:-1
position: 2070742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2068119-2068261:-1:exon

position:2068119:-1
position: 2068119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2068261:-1
position: 2068261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2062869-2062943:-1:exon

position:2062869:-1
position: 2062869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2062943:-1
position: 2062943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2059270-2059372:-1:exon

position:2059270:-1
position: 2059270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2059372:-1
position: 2059372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2052661-2052810:-1:exon

position:2052661:-1
position: 2052661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2052810:-1
position: 2052810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2038259-2038319:-1:exon

position:2038259:-1
position: 2038259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2038319:-1
position: 2038319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2034273-2034528:-1:exon

position:2034273:-1
position: 2034273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2034528:-1
position: 2034528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2030720-2031750:-1:exon

position:2031750:-1
position: 2031750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SYN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SYN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synapsin-2
translation: MMNFLRRRLSDSSFIANLPNGYMTDLQRPEPQQPPPPPPSAGSPAPASGSPAAERRQPPQPAPPQQQPPPQQSAGSSFFSSLSNAVKQTAASAGLVDASAAVSAAVGRKFKLLLVIDEPHTDWAKAFRGKKVHGEYDIKVEQAEFSEINLIAHADGNYAVDIQVIRNGTKVVRSFRPDFVLVRQHSYSMAENEDFRNLIIGMQYAGIPSVNSLESIYNFCDKPWVFAQLVSVYKTLGPEKFPLIEQTFYPNHKEMLTMPTFPVVVKIGHAHSGMGKIKVDNHYDFQDIASVVALTQTYATTEPFIDSKYDIRIQKIGSNYKAYMRTSISGNWKTNTGSAMLEQIAMSDKYKLWVDTCSEIFGGLDICAVKAVHGKDGKDYIFEVMDCAMPLIGEHQAEDRQHITELVVSKMNQMLSKTPIPSPQRPTATQQPQSGSLKEPEPNKIPPQRPPPQGGPVQPQGMQSQSQEPLQPQRVFPAGQAAKPAASQPQRPPGPTTQQPRPQAQGPPSSRLSKEAEPQPQPEPQPAPQQKPQSHPQLNKSQSLTNAFSFTESSFFRSSVNEDEAKAETIRNLRKSFASLFSD
SIO_010081: SYN2
subclass of: SO_0000673
so part of: SYN2
location: complement(join(2031615..2031750,2034273..2034528,2038259..2038319,2052661..2052810,2059270..2059372,2062869..2062943,2068119..2068261,2070680..2070742,2121172..2121261,2136824..2136980,2141996..2142087,2144567..2144624,2205874..2206241))
location: region:2031615-2206241:-1
so has part: feature:2205874-2206241:-1:exon
so has part: feature:2144567-2144624:-1:exon
so has part: feature:2141996-2142087:-1:exon
so has part: feature:2136824-2136980:-1:exon
so has part: feature:2121172-2121261:-1:exon
so has part: feature:2070680-2070742:-1:exon
so has part: feature:2068119-2068261:-1:exon
so has part: feature:2062869-2062943:-1:exon
so has part: feature:2059270-2059372:-1:exon
so has part: feature:2052661-2052810:-1:exon
so has part: feature:2038259-2038319:-1:exon
so has part: feature:2034273-2034528:-1:exon
so has part: feature:2031615-2031750:-1:exon

XP_021386134.1
type: Protein
SIO_000068: ncbiprotein

position:2031615:-1
position: 2031615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2206241:-1
position: 2206241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2205874-2206241:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2144567-2144624:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2141996-2142087:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2136824-2136980:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2121172-2121261:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2070680-2070742:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2068119-2068261:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2062869-2062943:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2059270-2059372:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2052661-2052810:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2038259-2038319:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2034273-2034528:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2031615-2031750:-1:exon

TIMP4
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TIMP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2109367..2131647
location: region:2109367-2131647:1
so has part: feature:2109367-2131647:1:exon
subclass of: SO_0000010

110470660
type: Gene
SIO_000068: ncbigene

position:2109367:1
position: 2109367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2131647:1
position: 2131647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2109367-2131647:1:exon

TIMP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TIMP4
product: TIMP metallopeptidase inhibitor 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031505973.1
SIO_010081: TIMP4
subclass of: SO_0000673
so part of: TIMP4
location: join(2109367..2109619,2114652..2114766,2115418..2115542,2130970..2131647)
location: region:2109367-2131647:1
so has part: feature:2109367-2109619:1:exon
so has part: feature:2114652-2114766:1:exon
so has part: feature:2115418-2115542:1:exon
so has part: feature:2130970-2131647:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2109367-2109619:1:exon

position:2109619:1
position: 2109619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2114652-2114766:1:exon

position:2114652:1
position: 2114652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2114766:1
position: 2114766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2115418-2115542:1:exon

position:2115418:1
position: 2115418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2115542:1
position: 2115542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2130970-2131647:1:exon

position:2130970:1
position: 2130970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TIMP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TIMP4
product: TIMP metallopeptidase inhibitor 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_031505972.1
SIO_010081: TIMP4
subclass of: SO_0000673
so part of: TIMP4
location: join(2109367..2109619,2114652..2114766,2115418..2115542,2116734..2117452)
location: region:2109367-2117452:1
so has part: feature:2109367-2109619:1:exon
so has part: feature:2114652-2114766:1:exon
so has part: feature:2115418-2115542:1:exon
so has part: feature:2116734-2117452:1:exon

position:2117452:1
position: 2117452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2109367-2109619:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2114652-2114766:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2115418-2115542:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2116734-2117452:1:exon

position:2116734:1
position: 2116734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TIMP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TIMP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metalloproteinase inhibitor 4 isoform X2
translation: MPKSISIISIFACKIVICACAFKSLSLSLSLSLPVIRAKISSEKVVPASDDPLDTHKMIRYEIKQIKMFKGFEKLKDVQYVYTPFDSSLCGVKLEANNKKQYLLTGQILNDGKVLIHLCNYIEPWDDLSLSQKKSLNQRYQMGCGCKSPDKCPASAPVCCSRFLKYNWEWKNDKRPTWSSNTEEKTRWGRALESIK
SIO_010081: TIMP4
subclass of: SO_0000673
so part of: TIMP4
location: join(2109419..2109619,2114652..2114766,2115418..2115542,2130970..2131119)
location: region:2109419-2131119:1
so has part: feature:2109419-2109619:1:exon
so has part: feature:2114652-2114766:1:exon
so has part: feature:2115418-2115542:1:exon
so has part: feature:2130970-2131119:1:exon

XP_031361833.1
type: Protein
SIO_000068: ncbiprotein

position:2109419:1
position: 2109419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2131119:1
position: 2131119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2109419-2109619:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2114652-2114766:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2115418-2115542:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2130970-2131119:1:exon

TIMP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TIMP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metalloproteinase inhibitor 4 isoform X1
translation: MPKSISIISIFACKIVICACAFKSLSLSLSLSLPVIRAKISSEKVVPASDDPLDTHKMIRYEIKQIKMFKGFEKLKDVQYVYTPFDSSLCGVKLEANNKKQYLLTGQILNDGKVLIHLCNYIEPWDDLSLSQKKSLNQRYQMGCGCKITTCYMVPCSITAPNECLWTDWLIERRLYGHQARHYACIKRSDGTCSWYRGGPPPEKEFMDISEP
SIO_010081: TIMP4
subclass of: SO_0000673
so part of: TIMP4
location: join(2109419..2109619,2114652..2114766,2115418..2115542,2116734..2116931)
location: region:2109419-2116931:1
so has part: feature:2109419-2109619:1:exon
so has part: feature:2114652-2114766:1:exon
so has part: feature:2115418-2115542:1:exon
so has part: feature:2116734-2116931:1:exon

XP_031361832.1
type: Protein
SIO_000068: ncbiprotein

position:2116931:1
position: 2116931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2109419-2109619:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2114652-2114766:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2115418-2115542:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2116734-2116931:1:exon

TAMM41
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TAMM41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2271219..2304740
location: region:2271219-2304740:1
so has part: feature:2271219-2304740:1:exon
subclass of: SO_0000010

110470652
type: Gene
SIO_000068: ncbigene

position:2271219:1
position: 2271219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2304740:1
position: 2304740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2271219-2304740:1:exon

TAMM41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TAMM41
product: TAM41 mitochondrial translocator assembly and maintenance homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031505922.1
SIO_010081: TAMM41
subclass of: SO_0000673
so part of: TAMM41
location: join(2271219..2271400,2272320..2272499,2273775..2273867,2276182..2276332,2278442..2278587,2280631..2280796,2282815..2282877,2288455..2288552,2304127..2304740)
location: region:2271219-2304740:1
so has part: feature:2271219-2271400:1:exon
so has part: feature:2272320-2272499:1:exon
so has part: feature:2273775-2273867:1:exon
so has part: feature:2276182-2276332:1:exon
so has part: feature:2278442-2278587:1:exon
so has part: feature:2280631-2280796:1:exon
so has part: feature:2282815-2282877:1:exon
so has part: feature:2288455-2288552:1:exon
so has part: feature:2304127-2304740:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2271219-2271400:1:exon

position:2271400:1
position: 2271400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2272320-2272499:1:exon

position:2272320:1
position: 2272320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2272499:1
position: 2272499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2273775-2273867:1:exon

position:2273775:1
position: 2273775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2273867:1
position: 2273867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2276182-2276332:1:exon

position:2276182:1
position: 2276182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2276332:1
position: 2276332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2278442-2278587:1:exon

position:2278442:1
position: 2278442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2278587:1
position: 2278587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2280631-2280796:1:exon

position:2280631:1
position: 2280631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2280796:1
position: 2280796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2282815-2282877:1:exon

position:2282815:1
position: 2282815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2282877:1
position: 2282877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2288455-2288552:1:exon

position:2288455:1
position: 2288455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2288552:1
position: 2288552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2304127-2304740:1:exon

position:2304127:1
position: 2304127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TAMM41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TAMM41
product: TAM41 mitochondrial translocator assembly and maintenance homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021530461.2
SIO_010081: TAMM41
subclass of: SO_0000673
so part of: TAMM41
location: join(2271219..2271400,2272320..2272499,2273775..2273867,2276182..2276332,2278442..2278587,2280631..2280796,2282815..2282877,2288455..2288552,2290594..2290953)
location: region:2271219-2290953:1
so has part: feature:2271219-2271400:1:exon
so has part: feature:2272320-2272499:1:exon
so has part: feature:2273775-2273867:1:exon
so has part: feature:2276182-2276332:1:exon
so has part: feature:2278442-2278587:1:exon
so has part: feature:2280631-2280796:1:exon
so has part: feature:2282815-2282877:1:exon
so has part: feature:2288455-2288552:1:exon
so has part: feature:2290594-2290953:1:exon

position:2290953:1
position: 2290953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2271219-2271400:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2272320-2272499:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2273775-2273867:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2276182-2276332:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2278442-2278587:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2280631-2280796:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2282815-2282877:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2288455-2288552:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2290594-2290953:1:exon

position:2290594:1
position: 2290594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TAMM41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TAMM41
product: TAM41 mitochondrial translocator assembly and maintenance homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021530460.2
SIO_010081: TAMM41
subclass of: SO_0000673
so part of: TAMM41
location: join(2271219..2271400,2272320..2272499,2273775..2273867,2276182..2276332,2278442..2278587,2280631..2280796,2282815..2282877,2288455..2288808)
location: region:2271219-2288808:1
so has part: feature:2271219-2271400:1:exon
so has part: feature:2272320-2272499:1:exon
so has part: feature:2273775-2273867:1:exon
so has part: feature:2276182-2276332:1:exon
so has part: feature:2278442-2278587:1:exon
so has part: feature:2280631-2280796:1:exon
so has part: feature:2282815-2282877:1:exon
so has part: feature:2288455-2288808:1:exon

position:2288808:1
position: 2288808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2271219-2271400:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2272320-2272499:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2273775-2273867:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2276182-2276332:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2278442-2278587:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2280631-2280796:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2282815-2282877:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2288455-2288808:1:exon

TAMM41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TAMM41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidate cytidylyltransferase, mitochondrial isoform X1
translation: MALPVLSSSAVKFRRVLAHFPQELSLAFAYGSGVFRQAGASAEYGETNMLDFVFAVDDVVTWHMMNLLKNRNHYSFLKFFGPKKISTIQRYGAGIYYNTLVPCNGRMIKYGVISTDALIEDLLHWKTLYVAGRLQKPVKILAQNENSRLQAALVSNLKSAVTAAFLMLPESFSEEDLYLQIAGLSYSGDFRMIIGEDKFKVQNIVKPNIAHFQKLYSTILQDCPQVVYKHHLGRLEIDKSPEGQFTQLMALPKTLQQKITAIVNPPGKNRDVEEILLQVAHDPDCGFLVHQGISGIVRSSSIVQSAKTILTAGAKKSVIYSLKKLFKMTKGGLKKTS
SIO_010081: TAMM41
subclass of: SO_0000673
so part of: TAMM41
location: join(2271263..2271400,2272320..2272499,2273775..2273867,2276182..2276332,2278442..2278587,2280631..2280796,2282815..2282877,2288455..2288531)
location: region:2271263-2288531:1
so has part: feature:2271263-2271400:1:exon
so has part: feature:2272320-2272499:1:exon
so has part: feature:2273775-2273867:1:exon
so has part: feature:2276182-2276332:1:exon
so has part: feature:2278442-2278587:1:exon
so has part: feature:2280631-2280796:1:exon
so has part: feature:2282815-2282877:1:exon
so has part: feature:2288455-2288531:1:exon

XP_021386135.1
type: Protein
SIO_000068: ncbiprotein

position:2271263:1
position: 2271263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2288531:1
position: 2288531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2271263-2271400:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2272320-2272499:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2273775-2273867:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2276182-2276332:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2278442-2278587:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2280631-2280796:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2282815-2282877:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2288455-2288531:1:exon

TAMM41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TAMM41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidate cytidylyltransferase, mitochondrial isoform X1
translation: MALPVLSSSAVKFRRVLAHFPQELSLAFAYGSGVFRQAGASAEYGETNMLDFVFAVDDVVTWHMMNLLKNRNHYSFLKFFGPKKISTIQRYGAGIYYNTLVPCNGRMIKYGVISTDALIEDLLHWKTLYVAGRLQKPVKILAQNENSRLQAALVSNLKSAVTAAFLMLPESFSEEDLYLQIAGLSYSGDFRMIIGEDKFKVQNIVKPNIAHFQKLYSTILQDCPQVVYKHHLGRLEIDKSPEGQFTQLMALPKTLQQKITAIVNPPGKNRDVEEILLQVAHDPDCGFLVHQGISGIVRSSSIVQSAKTILTAGAKKSVIYSLKKLFKMTKGGLKKTS
SIO_010081: TAMM41
subclass of: SO_0000673
so part of: TAMM41
location: join(2271263..2271400,2272320..2272499,2273775..2273867,2276182..2276332,2278442..2278587,2280631..2280796,2282815..2282877,2288455..2288531)
location: region:2271263-2288531:1
so has part: feature:2271263-2271400:1:exon
so has part: feature:2272320-2272499:1:exon
so has part: feature:2273775-2273867:1:exon
so has part: feature:2276182-2276332:1:exon
so has part: feature:2278442-2278587:1:exon
so has part: feature:2280631-2280796:1:exon
so has part: feature:2282815-2282877:1:exon
so has part: feature:2288455-2288531:1:exon

XP_021386136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2271263-2271400:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2272320-2272499:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2273775-2273867:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2276182-2276332:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2278442-2278587:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2280631-2280796:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2282815-2282877:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2288455-2288531:1:exon

TAMM41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TAMM41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidate cytidylyltransferase, mitochondrial isoform X1
translation: MALPVLSSSAVKFRRVLAHFPQELSLAFAYGSGVFRQAGASAEYGETNMLDFVFAVDDVVTWHMMNLLKNRNHYSFLKFFGPKKISTIQRYGAGIYYNTLVPCNGRMIKYGVISTDALIEDLLHWKTLYVAGRLQKPVKILAQNENSRLQAALVSNLKSAVTAAFLMLPESFSEEDLYLQIAGLSYSGDFRMIIGEDKFKVQNIVKPNIAHFQKLYSTILQDCPQVVYKHHLGRLEIDKSPEGQFTQLMALPKTLQQKITAIVNPPGKNRDVEEILLQVAHDPDCGFLVHQGISGIVRSSSIVQSAKTILTAGAKKSVIYSLKKLFKMTKGGLKKTS
SIO_010081: TAMM41
subclass of: SO_0000673
so part of: TAMM41
location: join(2271263..2271400,2272320..2272499,2273775..2273867,2276182..2276332,2278442..2278587,2280631..2280796,2282815..2282877,2288455..2288531)
location: region:2271263-2288531:1
so has part: feature:2271263-2271400:1:exon
so has part: feature:2272320-2272499:1:exon
so has part: feature:2273775-2273867:1:exon
so has part: feature:2276182-2276332:1:exon
so has part: feature:2278442-2278587:1:exon
so has part: feature:2280631-2280796:1:exon
so has part: feature:2282815-2282877:1:exon
so has part: feature:2288455-2288531:1:exon

XP_031361782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2271263-2271400:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2272320-2272499:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2273775-2273867:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2276182-2276332:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2278442-2278587:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2280631-2280796:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2282815-2282877:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2288455-2288531:1:exon

TAMM41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TAMM41
product: TAM41 mitochondrial translocator assembly and maintenance homolog, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021530463.2
SIO_010081: TAMM41
subclass of: SO_0000673
so part of: TAMM41
location: join(2273992..2274079,2276182..2276332,2278442..2278587,2280631..2280796,2282815..2282877,2288455..2288808)
location: region:2273992-2288808:1
so has part: feature:2273992-2274079:1:exon
so has part: feature:2276182-2276332:1:exon
so has part: feature:2278442-2278587:1:exon
so has part: feature:2280631-2280796:1:exon
so has part: feature:2282815-2282877:1:exon
so has part: feature:2288455-2288808:1:exon

position:2273992:1
position: 2273992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2273992-2274079:1:exon

position:2274079:1
position: 2274079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2276182-2276332:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2278442-2278587:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2280631-2280796:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2282815-2282877:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2288455-2288808:1:exon

TAMM41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TAMM41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidate cytidylyltransferase, mitochondrial isoform X2
translation: MMFSGKRTLKVKILAQNENSRLQAALVSNLKSAVTAAFLMLPESFSEEDLYLQIAGLSYSGDFRMIIGEDKFKVQNIVKPNIAHFQKLYSTILQDCPQVVYKHHLGRLEIDKSPEGQFTQLMALPKTLQQKITAIVNPPGKNRDVEEILLQVAHDPDCGFLVHQGISGIVRSSSIVQSAKTILTAGAKKSVIYSLKKLFKMTKGGLKKTS
SIO_010081: TAMM41
subclass of: SO_0000673
so part of: TAMM41
location: join(2274050..2274079,2276182..2276332,2278442..2278587,2280631..2280796,2282815..2282877,2288455..2288531)
location: region:2274050-2288531:1
so has part: feature:2274050-2274079:1:exon
so has part: feature:2276182-2276332:1:exon
so has part: feature:2278442-2278587:1:exon
so has part: feature:2280631-2280796:1:exon
so has part: feature:2282815-2282877:1:exon
so has part: feature:2288455-2288531:1:exon

XP_021386138.1
type: Protein
SIO_000068: ncbiprotein

position:2274050:1
position: 2274050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2274050-2274079:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2276182-2276332:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2278442-2278587:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2280631-2280796:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2282815-2282877:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2288455-2288531:1:exon

VGLL4
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: VGLL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2306659..2384534
location: region:2306659-2384534:1
so has part: feature:2306659-2384534:1:exon
subclass of: SO_0000010

110470653
type: Gene
SIO_000068: ncbigene

position:2306659:1
position: 2306659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2384534:1
position: 2384534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2306659-2384534:1:exon

VGLL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: VGLL4
product: vestigial like family member 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021530466.1
SIO_010081: VGLL4
subclass of: SO_0000673
so part of: VGLL4
location: join(2306659..2306709,2313686..2313762,2359775..2359961,2375282..2375504,2378654..2378768,2381685..2384534)
location: region:2306659-2384534:1
so has part: feature:2306659-2306709:1:exon
so has part: feature:2313686-2313762:1:exon
so has part: feature:2359775-2359961:1:exon
so has part: feature:2375282-2375504:1:exon
so has part: feature:2378654-2378768:1:exon
so has part: feature:2381685-2384534:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2306659-2306709:1:exon

position:2306709:1
position: 2306709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2313686-2313762:1:exon

position:2313686:1
position: 2313686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2313762:1
position: 2313762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2359775-2359961:1:exon

position:2359775:1
position: 2359775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2359961:1
position: 2359961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2375282-2375504:1:exon

position:2375282:1
position: 2375282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2375504:1
position: 2375504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2378654-2378768:1:exon

position:2378654:1
position: 2378654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2378768:1
position: 2378768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2381685-2384534:1:exon

position:2381685:1
position: 2381685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VGLL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: VGLL4
product: vestigial like family member 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021530464.1
SIO_010081: VGLL4
subclass of: SO_0000673
so part of: VGLL4
location: join(2306734..2306747,2313686..2313762,2359775..2359961,2375282..2375504,2378654..2378768,2381685..2384534)
location: region:2306734-2384534:1
so has part: feature:2306734-2306747:1:exon
so has part: feature:2313686-2313762:1:exon
so has part: feature:2359775-2359961:1:exon
so has part: feature:2375282-2375504:1:exon
so has part: feature:2378654-2378768:1:exon
so has part: feature:2381685-2384534:1:exon

position:2306734:1
position: 2306734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2306734-2306747:1:exon

position:2306747:1
position: 2306747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2313686-2313762:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2359775-2359961:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2375282-2375504:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2378654-2378768:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2381685-2384534:1:exon

VGLL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: VGLL4
product: vestigial like family member 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021530465.1
SIO_010081: VGLL4
subclass of: SO_0000673
so part of: VGLL4
location: join(2309650..2309735,2313686..2313762,2359775..2359961,2375282..2375504,2378654..2378768,2381685..2384534)
location: region:2309650-2384534:1
so has part: feature:2309650-2309735:1:exon
so has part: feature:2313686-2313762:1:exon
so has part: feature:2359775-2359961:1:exon
so has part: feature:2375282-2375504:1:exon
so has part: feature:2378654-2378768:1:exon
so has part: feature:2381685-2384534:1:exon

position:2309650:1
position: 2309650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2309650-2309735:1:exon

position:2309735:1
position: 2309735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2313686-2313762:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2359775-2359961:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2375282-2375504:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2378654-2378768:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2381685-2384534:1:exon

VGLL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: VGLL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 4
translation: METPLDVLSRAASLVHADDEKREAALRGEPRMQPLQSPALSNHRTGPPPISPSKRKLSMDQGDEELDCENDHVSKMSRMFNPHLTKTANGDYRKEHRERSRSPIERAAAPTMSLHANHMYASIPSLSMEQPLALTKNSVDAARTVGISPSLSSVERQQNRPSVITCASANNRNCNLSHCPIAHSACAGAAYRRPSSSTAACDPVVEEHFRRSLGKNYKEPEPVANSVSITGSVDDHFAKALGDTWLQIKAAKDGVGSSPESASRRGQASPSSHMVSHNHSPSVAS
SIO_010081: VGLL4
subclass of: SO_0000673
so part of: VGLL4
location: join(2313699..2313762,2359775..2359961,2375282..2375504,2378654..2378768,2381685..2381953)
location: region:2313699-2381953:1
so has part: feature:2313699-2313762:1:exon
so has part: feature:2359775-2359961:1:exon
so has part: feature:2375282-2375504:1:exon
so has part: feature:2378654-2378768:1:exon
so has part: feature:2381685-2381953:1:exon

XP_021386139.1
type: Protein
SIO_000068: ncbiprotein

position:2313699:1
position: 2313699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2381953:1
position: 2381953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2313699-2313762:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2359775-2359961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2375282-2375504:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2378654-2378768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2381685-2381953:1:exon

VGLL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: VGLL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 4
translation: METPLDVLSRAASLVHADDEKREAALRGEPRMQPLQSPALSNHRTGPPPISPSKRKLSMDQGDEELDCENDHVSKMSRMFNPHLTKTANGDYRKEHRERSRSPIERAAAPTMSLHANHMYASIPSLSMEQPLALTKNSVDAARTVGISPSLSSVERQQNRPSVITCASANNRNCNLSHCPIAHSACAGAAYRRPSSSTAACDPVVEEHFRRSLGKNYKEPEPVANSVSITGSVDDHFAKALGDTWLQIKAAKDGVGSSPESASRRGQASPSSHMVSHNHSPSVAS
SIO_010081: VGLL4
subclass of: SO_0000673
so part of: VGLL4
location: join(2313699..2313762,2359775..2359961,2375282..2375504,2378654..2378768,2381685..2381953)
location: region:2313699-2381953:1
so has part: feature:2313699-2313762:1:exon
so has part: feature:2359775-2359961:1:exon
so has part: feature:2375282-2375504:1:exon
so has part: feature:2378654-2378768:1:exon
so has part: feature:2381685-2381953:1:exon

XP_021386140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2313699-2313762:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2359775-2359961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2375282-2375504:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2378654-2378768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2381685-2381953:1:exon

VGLL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: VGLL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 4
translation: METPLDVLSRAASLVHADDEKREAALRGEPRMQPLQSPALSNHRTGPPPISPSKRKLSMDQGDEELDCENDHVSKMSRMFNPHLTKTANGDYRKEHRERSRSPIERAAAPTMSLHANHMYASIPSLSMEQPLALTKNSVDAARTVGISPSLSSVERQQNRPSVITCASANNRNCNLSHCPIAHSACAGAAYRRPSSSTAACDPVVEEHFRRSLGKNYKEPEPVANSVSITGSVDDHFAKALGDTWLQIKAAKDGVGSSPESASRRGQASPSSHMVSHNHSPSVAS
SIO_010081: VGLL4
subclass of: SO_0000673
so part of: VGLL4
location: join(2313699..2313762,2359775..2359961,2375282..2375504,2378654..2378768,2381685..2381953)
location: region:2313699-2381953:1
so has part: feature:2313699-2313762:1:exon
so has part: feature:2359775-2359961:1:exon
so has part: feature:2375282-2375504:1:exon
so has part: feature:2378654-2378768:1:exon
so has part: feature:2381685-2381953:1:exon

XP_021386141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2313699-2313762:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2359775-2359961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2375282-2375504:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2378654-2378768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2381685-2381953:1:exon

ATG7
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: ATG7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2402647..2480548)
location: region:2402647-2480548:-1
so has part: feature:2402647-2480548:-1:exon
subclass of: SO_0000010

110470655
type: Gene
SIO_000068: ncbigene

position:2402647:-1
position: 2402647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2480548:-1
position: 2480548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2402647-2480548:-1:exon

ATG7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ATG7
product: autophagy related 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021530467.2
SIO_010081: ATG7
subclass of: SO_0000673
so part of: ATG7
location: complement(join(2402647..2402933,2449627..2449749,2463312..2463392,2464501..2464576,2465188..2465303,2465545..2465748,2468896..2469090,2471711..2471869,2472501..2472645,2473919..2474009,2475052..2475173,2476140..2476228,2476705..2476872,2477398..2477514,2477968..2478045,2478866..2478983,2480148..2480202,2480380..2480548))
location: region:2402647-2480548:-1
so has part: feature:2480380-2480548:-1:exon
so has part: feature:2480148-2480202:-1:exon
so has part: feature:2478866-2478983:-1:exon
so has part: feature:2477968-2478045:-1:exon
so has part: feature:2477398-2477514:-1:exon
so has part: feature:2476705-2476872:-1:exon
so has part: feature:2476140-2476228:-1:exon
so has part: feature:2475052-2475173:-1:exon
so has part: feature:2473919-2474009:-1:exon
so has part: feature:2472501-2472645:-1:exon
so has part: feature:2471711-2471869:-1:exon
so has part: feature:2468896-2469090:-1:exon
so has part: feature:2465545-2465748:-1:exon
so has part: feature:2465188-2465303:-1:exon
so has part: feature:2464501-2464576:-1:exon
so has part: feature:2463312-2463392:-1:exon
so has part: feature:2449627-2449749:-1:exon
so has part: feature:2402647-2402933:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2480380-2480548:-1:exon

position:2480380:-1
position: 2480380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2480148-2480202:-1:exon

position:2480148:-1
position: 2480148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2480202:-1
position: 2480202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2478866-2478983:-1:exon

position:2478866:-1
position: 2478866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2478983:-1
position: 2478983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2477968-2478045:-1:exon

position:2477968:-1
position: 2477968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2478045:-1
position: 2478045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2477398-2477514:-1:exon

position:2477398:-1
position: 2477398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2477514:-1
position: 2477514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2476705-2476872:-1:exon

position:2476705:-1
position: 2476705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2476872:-1
position: 2476872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2476140-2476228:-1:exon

position:2476140:-1
position: 2476140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2476228:-1
position: 2476228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2475052-2475173:-1:exon

position:2475052:-1
position: 2475052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2475173:-1
position: 2475173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2473919-2474009:-1:exon

position:2473919:-1
position: 2473919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2474009:-1
position: 2474009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2472501-2472645:-1:exon

position:2472501:-1
position: 2472501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2472645:-1
position: 2472645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2471711-2471869:-1:exon

position:2471711:-1
position: 2471711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2471869:-1
position: 2471869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2468896-2469090:-1:exon

position:2468896:-1
position: 2468896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2469090:-1
position: 2469090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2465545-2465748:-1:exon

position:2465545:-1
position: 2465545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2465748:-1
position: 2465748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2465188-2465303:-1:exon

position:2465188:-1
position: 2465188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2465303:-1
position: 2465303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2464501-2464576:-1:exon

position:2464501:-1
position: 2464501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2464576:-1
position: 2464576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2463312-2463392:-1:exon

position:2463312:-1
position: 2463312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2463392:-1
position: 2463392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2449627-2449749:-1:exon

position:2449627:-1
position: 2449627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2449749:-1
position: 2449749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2402647-2402933:-1:exon

position:2402933:-1
position: 2402933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATG7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ATG7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-like modifier-activating enzyme ATG7
translation: MAAPRRAAPAPPAPLQFAPFSSALDAGFWHELTQRKLTQYRLDETPKLIKGYYYNGDPPGLPARLTLEFSAFDMNASIPARCCPAFGTLYNTNTFETFKSCDKKALLDKEAKEIWESIKSGAALENPMLLNRFLLLTFADLKKYHFYYWFCYPALCFPDGIQITQKPVCLGDRFSLNQLCLHFQIQALQKAYDDLCQEEGVTALPYFLIKYHDNSVMISLLKKWDGFFQDQGGKVTVGVYDPCNLSQYPGWPLRNFLILAAHKWGSALQGVEVLCFRDRTLQGVRDITHSIIFEIKLPEAPLGPDCPKAVGWEKNQKGGMGPRMVNLSECMDPKRLAESSVDLNLKLMCWRLVPTLDLEKIVAAKCLLLGAGTLGCSVARTLMGWGVRKITFVDNAKISYSNPVRQPLYEFEDCLSGGKPKALAAADRLQKIFPGVSSAGYNMSIPMPGHPVDFSEVTLAQARRDVAQLEELIEAHDVVFLLMDTRESRWLPAVIAASKRKLVINAALGFDTFVVMRHGLKKPKQQESGDSRFSNASAASDLLGSSLFSNIPGYKLGCYFCNDVVAPGDSTRDRTLDQQCTVSRPGLAMVAGALAVELMVSVLQHPEGGYAVASSSDDRMNEPPTSLGLVPHQIRGFLSRFDNVLPVSLAFDKCTACSAKVLEQYEREGFNFLAKVFNSSHSFLEDLTGLTLLHQETQAAEIWDMSDDETI
SIO_010081: ATG7
subclass of: SO_0000673
so part of: ATG7
location: complement(join(2402901..2402933,2449627..2449749,2463312..2463392,2464501..2464576,2465188..2465303,2465545..2465748,2468896..2469090,2471711..2471869,2472501..2472645,2473919..2474009,2475052..2475173,2476140..2476228,2476705..2476872,2477398..2477514,2477968..2478045,2478866..2478983,2480148..2480202,2480380..2480545))
location: region:2402901-2480545:-1
so has part: feature:2480380-2480545:-1:exon
so has part: feature:2480148-2480202:-1:exon
so has part: feature:2478866-2478983:-1:exon
so has part: feature:2477968-2478045:-1:exon
so has part: feature:2477398-2477514:-1:exon
so has part: feature:2476705-2476872:-1:exon
so has part: feature:2476140-2476228:-1:exon
so has part: feature:2475052-2475173:-1:exon
so has part: feature:2473919-2474009:-1:exon
so has part: feature:2472501-2472645:-1:exon
so has part: feature:2471711-2471869:-1:exon
so has part: feature:2468896-2469090:-1:exon
so has part: feature:2465545-2465748:-1:exon
so has part: feature:2465188-2465303:-1:exon
so has part: feature:2464501-2464576:-1:exon
so has part: feature:2463312-2463392:-1:exon
so has part: feature:2449627-2449749:-1:exon
so has part: feature:2402901-2402933:-1:exon

XP_021386142.1
type: Protein
SIO_000068: ncbiprotein

position:2402901:-1
position: 2402901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2480545:-1
position: 2480545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2480380-2480545:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2480148-2480202:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2478866-2478983:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2477968-2478045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2477398-2477514:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2476705-2476872:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2476140-2476228:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2475052-2475173:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2473919-2474009:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2472501-2472645:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2471711-2471869:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2468896-2469090:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2465545-2465748:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2465188-2465303:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2464501-2464576:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2463312-2463392:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2449627-2449749:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2402901-2402933:-1:exon

HRH1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: HRH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2485537..2492551)
location: region:2485537-2492551:-1
so has part: feature:2485537-2492551:-1:exon
subclass of: SO_0000010

110470670
type: Gene
SIO_000068: ncbigene

position:2485537:-1
position: 2485537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2492551:-1
position: 2492551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2485537-2492551:-1:exon

HRH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: HRH1
product: histamine receptor H1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021530489.2
SIO_010081: HRH1
subclass of: SO_0000673
so part of: HRH1
location: complement(join(2485537..2487060,2488089..2488251,2492486..2492551))
location: region:2485537-2492551:-1
so has part: feature:2492486-2492551:-1:exon
so has part: feature:2488089-2488251:-1:exon
so has part: feature:2485537-2487060:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2492486-2492551:-1:exon

position:2492486:-1
position: 2492486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2488089-2488251:-1:exon

position:2488089:-1
position: 2488089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2488251:-1
position: 2488251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2485537-2487060:-1:exon

position:2487060:-1
position: 2487060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HRH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: HRH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histamine H1 receptor
translation: MTERPRPGRPLRFSLRVPAKKMSNNTTEASSNTPPALLGLLLGGISLVTIVMNILVLCAVKMEKKLQTVGNLYIVSLSIADLIVGVAVMPLNIVDLLSPAWPLGLEACLFWLSMDYVASTASIFNLFILCVDRYRSVQQPLQYLKYRTKMRASLLILGVWLLSFTWVIPILGWHLFANNGQRTVEENKCETEFFKVTWFKVLAAIFNFYLPSLLMLWFYCKIFRAVQKHCQHRELNNRSHLSSTEKNTVQQTKTKDDKNICLQEQIIGENSPGVDKENSPEPQKVEAELHFSHPDKASKALCNGKVMKWSCFSLTTAKPEPGLDKAEKRGACATKKPGAKEQPDCQDSDSSGASDNHTFTEVVPQAEPSPEGACHPQGSTERRDSRETTFLRKTWHALHSHSRSIHRHGNRERKAAKQLGVIMAAFMICWIPYFVLFMVITFHDHKQLLELHRGAIWLGYVNSTLNPFLYPLCNQNFKKTFKKILHIH
SIO_010081: HRH1
subclass of: SO_0000673
so part of: HRH1
location: complement(2485537..2487003)
location: region:2485537-2487003:-1
so has part: feature:2485537-2487003:-1:exon

XP_021386164.1
type: Protein
SIO_000068: ncbiprotein

position:2487003:-1
position: 2487003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2485537-2487003:-1:exon

SLC6A1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SLC6A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2589761..2634302)
location: region:2589761-2634302:-1
so has part: feature:2589761-2634302:-1:exon
subclass of: SO_0000010

110470656
type: Gene
SIO_000068: ncbigene

position:2589761:-1
position: 2589761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2634302:-1
position: 2634302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2589761-2634302:-1:exon

SLC6A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SLC6A1
product: solute carrier family 6 member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 50 ESTs, 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021530469.2
SIO_010081: SLC6A1
subclass of: SO_0000673
so part of: SLC6A1
location: complement(join(2589761..2592161,2594057..2594224,2595714..2595814,2597082..2597184,2598170..2598301,2600593..2600705,2603214..2603338,2603774..2603877,2603991..2604125,2605407..2605539,2605652..2605761,2607144..2607244,2608578..2608709,2609998..2610402,2634086..2634302))
location: region:2589761-2634302:-1
so has part: feature:2634086-2634302:-1:exon
so has part: feature:2609998-2610402:-1:exon
so has part: feature:2608578-2608709:-1:exon
so has part: feature:2607144-2607244:-1:exon
so has part: feature:2605652-2605761:-1:exon
so has part: feature:2605407-2605539:-1:exon
so has part: feature:2603991-2604125:-1:exon
so has part: feature:2603774-2603877:-1:exon
so has part: feature:2603214-2603338:-1:exon
so has part: feature:2600593-2600705:-1:exon
so has part: feature:2598170-2598301:-1:exon
so has part: feature:2597082-2597184:-1:exon
so has part: feature:2595714-2595814:-1:exon
so has part: feature:2594057-2594224:-1:exon
so has part: feature:2589761-2592161:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2634086-2634302:-1:exon

position:2634086:-1
position: 2634086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2609998-2610402:-1:exon

position:2609998:-1
position: 2609998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2610402:-1
position: 2610402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2608578-2608709:-1:exon

position:2608578:-1
position: 2608578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2608709:-1
position: 2608709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2607144-2607244:-1:exon

position:2607144:-1
position: 2607144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2607244:-1
position: 2607244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2605652-2605761:-1:exon

position:2605652:-1
position: 2605652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2605761:-1
position: 2605761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2605407-2605539:-1:exon

position:2605407:-1
position: 2605407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2605539:-1
position: 2605539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2603991-2604125:-1:exon

position:2603991:-1
position: 2603991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2604125:-1
position: 2604125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2603774-2603877:-1:exon

position:2603774:-1
position: 2603774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2603877:-1
position: 2603877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2603214-2603338:-1:exon

position:2603214:-1
position: 2603214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2603338:-1
position: 2603338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2600593-2600705:-1:exon

position:2600593:-1
position: 2600593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2600705:-1
position: 2600705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2598170-2598301:-1:exon

position:2598170:-1
position: 2598170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2598301:-1
position: 2598301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2597082-2597184:-1:exon

position:2597082:-1
position: 2597082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2597184:-1
position: 2597184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2595714-2595814:-1:exon

position:2595714:-1
position: 2595714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2595814:-1
position: 2595814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2594057-2594224:-1:exon

position:2594057:-1
position: 2594057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2594224:-1
position: 2594224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2589761-2592161:-1:exon

position:2592161:-1
position: 2592161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC6A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SLC6A1
product: solute carrier family 6 member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 ESTs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021530470.2
SIO_010081: SLC6A1
subclass of: SO_0000673
so part of: SLC6A1
location: complement(join(2589761..2592161,2594057..2594224,2595714..2595814,2597082..2597184,2598170..2598301,2600593..2600705,2603214..2603338,2603774..2603877,2603991..2604125,2605407..2605539,2605652..2605761,2607144..2607244,2608578..2608709,2609998..2610060,2610146..2610402,2634086..2634299))
location: region:2589761-2634299:-1
so has part: feature:2634086-2634299:-1:exon
so has part: feature:2610146-2610402:-1:exon
so has part: feature:2609998-2610060:-1:exon
so has part: feature:2608578-2608709:-1:exon
so has part: feature:2607144-2607244:-1:exon
so has part: feature:2605652-2605761:-1:exon
so has part: feature:2605407-2605539:-1:exon
so has part: feature:2603991-2604125:-1:exon
so has part: feature:2603774-2603877:-1:exon
so has part: feature:2603214-2603338:-1:exon
so has part: feature:2600593-2600705:-1:exon
so has part: feature:2598170-2598301:-1:exon
so has part: feature:2597082-2597184:-1:exon
so has part: feature:2595714-2595814:-1:exon
so has part: feature:2594057-2594224:-1:exon
so has part: feature:2589761-2592161:-1:exon

position:2634299:-1
position: 2634299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2634086-2634299:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2610146-2610402:-1:exon

position:2610146:-1
position: 2610146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2609998-2610060:-1:exon

position:2610060:-1
position: 2610060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2608578-2608709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2607144-2607244:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2605652-2605761:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2605407-2605539:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2603991-2604125:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2603774-2603877:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2603214-2603338:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2600593-2600705:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2598170-2598301:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2597082-2597184:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2595714-2595814:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2594057-2594224:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2589761-2592161:-1:exon

SLC6A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SLC6A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium- and chloride-dependent GABA transporter 1 isoform X1
translation: MATNGTKVADGQISTEVDASITNDKPKTLVVKVQKKKTDLPDRDTWKGKFDFLMSCVGYAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQYTSIGGLGVWKLAPMFKGVGLAAAVLSFWLNIYYIVIISWAIYYLYNSFTTTLPWKHCENPWNTDRCFSNYTLANTTNMTSAVVEFWERNMHQMTDGLEKPGQIRWPLAITLAIAWILVYFCIWKGVGWTGKVVYFSATYPYVMLLILFFRGVTLPGAKEGILFYITPNFSKLSDSEVWLDAATQIFFSYGLGLGSLIALGSYNPFHNNVYRDSIIVCCINSCTSMFAGFVIFSIVGFMANVTKRPIADVAASGPGLAFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEFPKLLRNRRELFIAVVCIVSYVIGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFECISISWCYGVNRFYDNIQEMVGYRPCIWWKLCWSFFTPIIVAGVFIFSAVQMTPLTMGSYVFPKWGQGVGWFMALSSMVLIPGYMAYMFLTLKGSLKQRIQVMIQPSEDITHPENGPDQAQQSNSANKEAYI
SIO_010081: SLC6A1
subclass of: SO_0000673
so part of: SLC6A1
location: complement(join(2592057..2592161,2594057..2594224,2595714..2595814,2597082..2597184,2598170..2598301,2600593..2600705,2603214..2603338,2603774..2603877,2603991..2604125,2605407..2605539,2605652..2605761,2607144..2607244,2608578..2608709,2609998..2610232))
location: region:2592057-2610232:-1
so has part: feature:2609998-2610232:-1:exon
so has part: feature:2608578-2608709:-1:exon
so has part: feature:2607144-2607244:-1:exon
so has part: feature:2605652-2605761:-1:exon
so has part: feature:2605407-2605539:-1:exon
so has part: feature:2603991-2604125:-1:exon
so has part: feature:2603774-2603877:-1:exon
so has part: feature:2603214-2603338:-1:exon
so has part: feature:2600593-2600705:-1:exon
so has part: feature:2598170-2598301:-1:exon
so has part: feature:2597082-2597184:-1:exon
so has part: feature:2595714-2595814:-1:exon
so has part: feature:2594057-2594224:-1:exon
so has part: feature:2592057-2592161:-1:exon

XP_021386144.1
type: Protein
SIO_000068: ncbiprotein

position:2592057:-1
position: 2592057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2610232:-1
position: 2610232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2609998-2610232:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2608578-2608709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2607144-2607244:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2605652-2605761:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2605407-2605539:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2603991-2604125:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2603774-2603877:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2603214-2603338:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2600593-2600705:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2598170-2598301:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2597082-2597184:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2595714-2595814:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2594057-2594224:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2592057-2592161:-1:exon

SLC6A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SLC6A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium- and chloride-dependent GABA transporter 1 isoform X2
translation: MFKGVGLAAAVLSFWLNIYYIVIISWAIYYLYNSFTTTLPWKHCENPWNTDRCFSNYTLANTTNMTSAVVEFWERNMHQMTDGLEKPGQIRWPLAITLAIAWILVYFCIWKGVGWTGKVVYFSATYPYVMLLILFFRGVTLPGAKEGILFYITPNFSKLSDSEVWLDAATQIFFSYGLGLGSLIALGSYNPFHNNVYRDSIIVCCINSCTSMFAGFVIFSIVGFMANVTKRPIADVAASGPGLAFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEFPKLLRNRRELFIAVVCIVSYVIGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFECISISWCYGVNRFYDNIQEMVGYRPCIWWKLCWSFFTPIIVAGVFIFSAVQMTPLTMGSYVFPKWGQGVGWFMALSSMVLIPGYMAYMFLTLKGSLKQRIQVMIQPSEDITHPENGPDQAQQSNSANKEAYI
SIO_010081: SLC6A1
subclass of: SO_0000673
so part of: SLC6A1
location: complement(join(2592057..2592161,2594057..2594224,2595714..2595814,2597082..2597184,2598170..2598301,2600593..2600705,2603214..2603338,2603774..2603877,2603991..2604125,2605407..2605539,2605652..2605761,2607144..2607244,2608578..2608587))
location: region:2592057-2608587:-1
so has part: feature:2608578-2608587:-1:exon
so has part: feature:2607144-2607244:-1:exon
so has part: feature:2605652-2605761:-1:exon
so has part: feature:2605407-2605539:-1:exon
so has part: feature:2603991-2604125:-1:exon
so has part: feature:2603774-2603877:-1:exon
so has part: feature:2603214-2603338:-1:exon
so has part: feature:2600593-2600705:-1:exon
so has part: feature:2598170-2598301:-1:exon
so has part: feature:2597082-2597184:-1:exon
so has part: feature:2595714-2595814:-1:exon
so has part: feature:2594057-2594224:-1:exon
so has part: feature:2592057-2592161:-1:exon

XP_021386145.1
type: Protein
SIO_000068: ncbiprotein

position:2608587:-1
position: 2608587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2608578-2608587:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2607144-2607244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2605652-2605761:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2605407-2605539:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2603991-2604125:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2603774-2603877:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2603214-2603338:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2600593-2600705:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2598170-2598301:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2597082-2597184:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2595714-2595814:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2594057-2594224:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2592057-2592161:-1:exon

SLC6A11
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SLC6A11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2746622..2840446)
location: region:2746622-2840446:-1
so has part: feature:2746622-2840446:-1:exon
subclass of: SO_0000010

110470657
type: Gene
SIO_000068: ncbigene

position:2746622:-1
position: 2746622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2840446:-1
position: 2840446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2746622-2840446:-1:exon

SLC6A11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SLC6A11
product: solute carrier family 6 member 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021530472.2
SIO_010081: SLC6A11
subclass of: SO_0000673
so part of: SLC6A11
location: complement(join(2746622..2750187,2751578..2751748,2753021..2753121,2753813..2753915,2755533..2755670,2756957..2757069,2758806..2758930,2764979..2765082,2794897..2795031,2817041..2817173,2834874..2834964,2836393..2836533,2836709..2836843,2839551..2839781,2840208..2840446))
location: region:2746622-2840446:-1
so has part: feature:2840208-2840446:-1:exon
so has part: feature:2839551-2839781:-1:exon
so has part: feature:2836709-2836843:-1:exon
so has part: feature:2836393-2836533:-1:exon
so has part: feature:2834874-2834964:-1:exon
so has part: feature:2817041-2817173:-1:exon
so has part: feature:2794897-2795031:-1:exon
so has part: feature:2764979-2765082:-1:exon
so has part: feature:2758806-2758930:-1:exon
so has part: feature:2756957-2757069:-1:exon
so has part: feature:2755533-2755670:-1:exon
so has part: feature:2753813-2753915:-1:exon
so has part: feature:2753021-2753121:-1:exon
so has part: feature:2751578-2751748:-1:exon
so has part: feature:2746622-2750187:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2840208-2840446:-1:exon

position:2840208:-1
position: 2840208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2839551-2839781:-1:exon

position:2839551:-1
position: 2839551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2839781:-1
position: 2839781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2836709-2836843:-1:exon

position:2836709:-1
position: 2836709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2836843:-1
position: 2836843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2836393-2836533:-1:exon

position:2836393:-1
position: 2836393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2836533:-1
position: 2836533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2834874-2834964:-1:exon

position:2834874:-1
position: 2834874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2834964:-1
position: 2834964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2817041-2817173:-1:exon

position:2817041:-1
position: 2817041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2817173:-1
position: 2817173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2794897-2795031:-1:exon

position:2794897:-1
position: 2794897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2795031:-1
position: 2795031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2764979-2765082:-1:exon

position:2764979:-1
position: 2764979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2765082:-1
position: 2765082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2758806-2758930:-1:exon

position:2758806:-1
position: 2758806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2758930:-1
position: 2758930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2756957-2757069:-1:exon

position:2756957:-1
position: 2756957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2757069:-1
position: 2757069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2755533-2755670:-1:exon

position:2755533:-1
position: 2755533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2755670:-1
position: 2755670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2753813-2753915:-1:exon

position:2753813:-1
position: 2753813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2753915:-1
position: 2753915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2753021-2753121:-1:exon

position:2753021:-1
position: 2753021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2753121:-1
position: 2753121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2751578-2751748:-1:exon

position:2751578:-1
position: 2751578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2751748:-1
position: 2751748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2746622-2750187:-1:exon

position:2750187:-1
position: 2750187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC6A11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SLC6A11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium- and chloride-dependent GABA transporter 3
translation: MTAEKTIPIINGKPEDALDPEASSTNLVHSNDKKVHERGHWNNKVEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFLIPYVVFFICCGIPVFFLETALGQFTSEGGITCWRKVCPLFEGIGYATQVIEAHLNVYYIIILAWAIFYLFNCFTTELPWASCGHEWNTENCVEFQKLNMSNCSQVSLQNATSPVMEFWERRVLAISDGIEHIGNLRWELALCLLAAWTICYFCIWKGTKSTGKVVYVTATFPYIMLMILLIRGVTLPGASEGIKFYLYPDISRLSDPQVWVDAGTQIFFSYAICLGCLTALGSYNNYNNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQGVPIAEVAESGPGLAFIAYPKAVTMMPLSPLWAALFFMMLIFLGLDSQFVCVESIVTAVVDMYPKVFRRGYRRELLILGLSVVSYFLGLIMLTEGGMYVFQLFDSYAASGMCLLFVAIFECVCIGWVYGSNRFYENIEDMIGYKPVSLIKWCWMVLTPGICAGIFIFFLVKYKPLKYNNVYIYPDWGYGIGWMMALSSMVCIPLWICIKLWKTEGTFMEKFRKLITPSSDLKMRGKLGGGAYIAAINDCDAKLKGDGNISTITEKETHF
SIO_010081: SLC6A11
subclass of: SO_0000673
so part of: SLC6A11
location: complement(join(2750035..2750187,2751578..2751748,2753021..2753121,2753813..2753915,2755533..2755670,2756957..2757069,2758806..2758930,2764979..2765082,2794897..2795031,2817041..2817173,2834874..2834964,2836393..2836533,2836709..2836843,2839551..2839770))
location: region:2750035-2839770:-1
so has part: feature:2839551-2839770:-1:exon
so has part: feature:2836709-2836843:-1:exon
so has part: feature:2836393-2836533:-1:exon
so has part: feature:2834874-2834964:-1:exon
so has part: feature:2817041-2817173:-1:exon
so has part: feature:2794897-2795031:-1:exon
so has part: feature:2764979-2765082:-1:exon
so has part: feature:2758806-2758930:-1:exon
so has part: feature:2756957-2757069:-1:exon
so has part: feature:2755533-2755670:-1:exon
so has part: feature:2753813-2753915:-1:exon
so has part: feature:2753021-2753121:-1:exon
so has part: feature:2751578-2751748:-1:exon
so has part: feature:2750035-2750187:-1:exon

XP_021386147.1
type: Protein
SIO_000068: ncbiprotein

position:2750035:-1
position: 2750035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2839770:-1
position: 2839770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2839551-2839770:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2836709-2836843:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2836393-2836533:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2834874-2834964:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2817041-2817173:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2794897-2795031:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2764979-2765082:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2758806-2758930:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2756957-2757069:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2755533-2755670:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2753813-2753915:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2753021-2753121:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2751578-2751748:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2750035-2750187:-1:exon

LOC116184107
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116184107
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2840482..2843289
location: region:2840482-2843289:1
so has part: feature:2840482-2843289:1:exon
subclass of: SO_0000011

116184107
type: Gene
SIO_000068: ncbigene

position:2840482:1
position: 2840482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2843289:1
position: 2843289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2840482-2843289:1:exon

LOC116184107
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC116184107
product: uncharacterized LOC116184107
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004148847.1
SIO_010081: LOC116184107
subclass of: SO_0000673
so part of: LOC116184107
location: join(2840482..2840642,2841818..2843289)
location: region:2840482-2843289:1
so has part: feature:2840482-2840642:1:exon
so has part: feature:2841818-2843289:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2840482-2840642:1:exon

position:2840642:1
position: 2840642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2841818-2843289:1:exon

position:2841818:1
position: 2841818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATP2B2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: ATP2B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2893188..3291705)
location: region:2893188-3291705:-1
so has part: feature:2893188-3291705:-1:exon
subclass of: SO_0000010

110470658
type: Gene
SIO_000068: ncbigene

position:2893188:-1
position: 2893188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3291705:-1
position: 3291705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2893188-3291705:-1:exon

ATP2B2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ATP2B2
product: ATPase plasma membrane Ca2+ transporting 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031505904.1
SIO_010081: ATP2B2
subclass of: SO_0000673
so part of: ATP2B2
location: complement(join(2893188..2896714,2913431..2913613,2917271..2917378,2918925..2919136,2922246..2922459,2930884..2931075,2931700..2931806,2938163..2938250,2939224..2939403,2945106..2945340,2946292..2946533,2968460..2968702,2970806..2971020,2973128..2973292,2974895..2974936,2980769..2980861,2984203..2984328,2985002..2985127,2986118..2986375,3008741..3008938,3061357..3061841,3152720..3152819,3189365..3189416,3291607..3291695))
location: region:2893188-3291695:-1
so has part: feature:3291607-3291695:-1:exon
so has part: feature:3189365-3189416:-1:exon
so has part: feature:3152720-3152819:-1:exon
so has part: feature:3061357-3061841:-1:exon
so has part: feature:3008741-3008938:-1:exon
so has part: feature:2986118-2986375:-1:exon
so has part: feature:2985002-2985127:-1:exon
so has part: feature:2984203-2984328:-1:exon
so has part: feature:2980769-2980861:-1:exon
so has part: feature:2974895-2974936:-1:exon
so has part: feature:2973128-2973292:-1:exon
so has part: feature:2970806-2971020:-1:exon
so has part: feature:2968460-2968702:-1:exon
so has part: feature:2946292-2946533:-1:exon
so has part: feature:2945106-2945340:-1:exon
so has part: feature:2939224-2939403:-1:exon
so has part: feature:2938163-2938250:-1:exon
so has part: feature:2931700-2931806:-1:exon
so has part: feature:2930884-2931075:-1:exon
so has part: feature:2922246-2922459:-1:exon
so has part: feature:2918925-2919136:-1:exon
so has part: feature:2917271-2917378:-1:exon
so has part: feature:2913431-2913613:-1:exon
so has part: feature:2893188-2896714:-1:exon

position:3291695:-1
position: 3291695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3291607-3291695:-1:exon

position:3291607:-1
position: 3291607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3189365-3189416:-1:exon