Lonchura striata domestica isolate Mets1 chromosome 10, lonStrDom2, whole genome shotgun sequence.
type: Entry
definition: Lonchura striata domestica isolate Mets1 chromosome 10, lonStrDom2, whole genome shotgun sequence.
sequence version: NC_042576.1
sequence date: 2019-11-05
sequence: sequence
division: CON
label: NC_042576.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA391487
dblink: SAMN11521339
keyword: WGS
keyword: RefSeq
source: Lonchura striata domestica (Bengalese finch)
organism: Lonchura striata domestica
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM016772.1.\nAssembly name: lonStrDom2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the HHMI/UCSF on 2019/06/05. The\noriginal whole-genome shotgun project has the accession\nSWKX00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: HHMI/UCSF\nAssembly Date :: 30-NOV-2018\nAssembly Method :: AllPaths v. JAN-2015; HiRise v.\n NOV-2018\nAssembly Name :: lonStrDom2\nGenome Representation :: Full\nExpected Final Version :: Yes\nReference-guided Assembly :: GCA_002197715.1\nGenome Coverage :: 151.0x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Lonchura striata domestica\n Annotation Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 21238631
topology: linear
so has quality: SO_0000987
location: 1..21238631
location: region:1-21238631:1
RO_0002162: 299123

NC_042576
type: RefSeq
SIO_000068: refseq

PRJNA391487
type: BioProject
SIO_000068: bioproject

SAMN11521339
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21238631:1
position: 21238631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-21238631:1:source
so part of: sequence
organism: Lonchura striata domestica
mol type: genomic DNA
isolate: Mets1
sub species: domestica
chromosome: 10
sex: male
tissue type: blood
dev stage: adult

299123
type: Taxonomy
SIO_000068: taxonomy

USP3
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: USP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 83476..132378
location: region:83476-132378:1
so has part: feature:83476-132378:1:exon
subclass of: SO_0000010

110480405
type: Gene
SIO_000068: ncbigene

position:83476:1
position: 83476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132378:1
position: 132378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83476-132378:1:exon

USP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: USP3
product: ubiquitin specific peptidase 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021548309.2
SIO_010081: USP3
subclass of: SO_0000673
so part of: USP3
location: join(83476..83689,84676..84774,106083..106143,107884..108015,113821..113904,115378..115459,117611..117693,118248..118361,119008..119121,124486..124632,126474..126580,126751..126831,127520..127638,127788..127901,128025..128092,128889..132378)
location: region:83476-132378:1
so has part: feature:83476-83689:1:exon
so has part: feature:84676-84774:1:exon
so has part: feature:106083-106143:1:exon
so has part: feature:107884-108015:1:exon
so has part: feature:113821-113904:1:exon
so has part: feature:115378-115459:1:exon
so has part: feature:117611-117693:1:exon
so has part: feature:118248-118361:1:exon
so has part: feature:119008-119121:1:exon
so has part: feature:124486-124632:1:exon
so has part: feature:126474-126580:1:exon
so has part: feature:126751-126831:1:exon
so has part: feature:127520-127638:1:exon
so has part: feature:127788-127901:1:exon
so has part: feature:128025-128092:1:exon
so has part: feature:128889-132378:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:83476-83689:1:exon

position:83689:1
position: 83689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:84676-84774:1:exon

position:84676:1
position: 84676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84774:1
position: 84774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:106083-106143:1:exon

position:106083:1
position: 106083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106143:1
position: 106143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:107884-108015:1:exon

position:107884:1
position: 107884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108015:1
position: 108015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:113821-113904:1:exon

position:113821:1
position: 113821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113904:1
position: 113904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:115378-115459:1:exon

position:115378:1
position: 115378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115459:1
position: 115459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:117611-117693:1:exon

position:117611:1
position: 117611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117693:1
position: 117693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:118248-118361:1:exon

position:118248:1
position: 118248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118361:1
position: 118361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:119008-119121:1:exon

position:119008:1
position: 119008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119121:1
position: 119121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:124486-124632:1:exon

position:124486:1
position: 124486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124632:1
position: 124632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:126474-126580:1:exon

position:126474:1
position: 126474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126580:1
position: 126580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:126751-126831:1:exon

position:126751:1
position: 126751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126831:1
position: 126831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:127520-127638:1:exon

position:127520:1
position: 127520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127638:1
position: 127638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:127788-127901:1:exon

position:127788:1
position: 127788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127901:1
position: 127901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:128025-128092:1:exon

position:128025:1
position: 128025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128092:1
position: 128092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:128889-132378:1:exon

position:128889:1
position: 128889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

USP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: USP3
product: ubiquitin specific peptidase 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021548310.2
SIO_010081: USP3
subclass of: SO_0000673
so part of: USP3
location: join(83476..83689,106083..106143,107884..108015,113821..113904,115378..115459,117611..117693,118248..118361,119008..119121,124486..124632,126474..126580,126751..126831,127520..127638,127788..127901,128025..128092,128889..132378)
location: region:83476-132378:1
so has part: feature:83476-83689:1:exon
so has part: feature:106083-106143:1:exon
so has part: feature:107884-108015:1:exon
so has part: feature:113821-113904:1:exon
so has part: feature:115378-115459:1:exon
so has part: feature:117611-117693:1:exon
so has part: feature:118248-118361:1:exon
so has part: feature:119008-119121:1:exon
so has part: feature:124486-124632:1:exon
so has part: feature:126474-126580:1:exon
so has part: feature:126751-126831:1:exon
so has part: feature:127520-127638:1:exon
so has part: feature:127788-127901:1:exon
so has part: feature:128025-128092:1:exon
so has part: feature:128889-132378:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:83476-83689:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106083-106143:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107884-108015:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:113821-113904:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:115378-115459:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:117611-117693:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:118248-118361:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:119008-119121:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:124486-124632:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:126474-126580:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:126751-126831:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:127520-127638:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:127788-127901:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:128025-128092:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:128889-132378:1:exon

USP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: USP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 3 isoform X1
translation: MECPHLGSSVCIVPDSAKFPQGSPSSWCCSGKMVVLYLVVSVPWCGKAAAYLTCSLIAVSGSQVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQIPMTNHKKTEKQEKVQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTSDRHRKRKLLENSSLNSKLLKVNGSTAALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSVILQENSSLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRTKNQESGPMCTLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLVAVVVHHGSGVGSGHYTAYAAHEGRWFHFNDSTVTLTDEETVGKAKAYILFYVERQAKPGAEKL
SIO_010081: USP3
subclass of: SO_0000673
so part of: USP3
location: join(83599..83689,84676..84774,106083..106143,107884..108015,113821..113904,115378..115459,117611..117693,118248..118361,119008..119121,124486..124632,126474..126580,126751..126831,127520..127638,127788..127901,128025..128092,128889..129054)
location: region:83599-129054:1
so has part: feature:83599-83689:1:exon
so has part: feature:84676-84774:1:exon
so has part: feature:106083-106143:1:exon
so has part: feature:107884-108015:1:exon
so has part: feature:113821-113904:1:exon
so has part: feature:115378-115459:1:exon
so has part: feature:117611-117693:1:exon
so has part: feature:118248-118361:1:exon
so has part: feature:119008-119121:1:exon
so has part: feature:124486-124632:1:exon
so has part: feature:126474-126580:1:exon
so has part: feature:126751-126831:1:exon
so has part: feature:127520-127638:1:exon
so has part: feature:127788-127901:1:exon
so has part: feature:128025-128092:1:exon
so has part: feature:128889-129054:1:exon

XP_021403984.1
type: Protein
SIO_000068: ncbiprotein

position:83599:1
position: 83599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129054:1
position: 129054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83599-83689:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:84676-84774:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:106083-106143:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107884-108015:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:113821-113904:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:115378-115459:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117611-117693:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:118248-118361:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:119008-119121:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:124486-124632:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:126474-126580:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:126751-126831:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:127520-127638:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:127788-127901:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:128025-128092:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:128889-129054:1:exon

USP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: USP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 3 isoform X2
translation: MECPHLGSSVCIVPDSAKFPQGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQIPMTNHKKTEKQEKVQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTSDRHRKRKLLENSSLNSKLLKVNGSTAALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSVILQENSSLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRTKNQESGPMCTLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLVAVVVHHGSGVGSGHYTAYAAHEGRWFHFNDSTVTLTDEETVGKAKAYILFYVERQAKPGAEKL
SIO_010081: USP3
subclass of: SO_0000673
so part of: USP3
location: join(83599..83689,106083..106143,107884..108015,113821..113904,115378..115459,117611..117693,118248..118361,119008..119121,124486..124632,126474..126580,126751..126831,127520..127638,127788..127901,128025..128092,128889..129054)
location: region:83599-129054:1
so has part: feature:83599-83689:1:exon
so has part: feature:106083-106143:1:exon
so has part: feature:107884-108015:1:exon
so has part: feature:113821-113904:1:exon
so has part: feature:115378-115459:1:exon
so has part: feature:117611-117693:1:exon
so has part: feature:118248-118361:1:exon
so has part: feature:119008-119121:1:exon
so has part: feature:124486-124632:1:exon
so has part: feature:126474-126580:1:exon
so has part: feature:126751-126831:1:exon
so has part: feature:127520-127638:1:exon
so has part: feature:127788-127901:1:exon
so has part: feature:128025-128092:1:exon
so has part: feature:128889-129054:1:exon

XP_021403985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83599-83689:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106083-106143:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107884-108015:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:113821-113904:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:115378-115459:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:117611-117693:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:118248-118361:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:119008-119121:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:124486-124632:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:126474-126580:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:126751-126831:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:127520-127638:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:127788-127901:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:128025-128092:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:128889-129054:1:exon

USP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: USP3
product: ubiquitin specific peptidase 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021548311.2
SIO_010081: USP3
subclass of: SO_0000673
so part of: USP3
location: join(83802..84096,84676..84774,106083..106143,107884..108015,113821..113904,115378..115459,117611..117693,118248..118361,119008..119121,124486..124632,126474..126580,126751..126831,127520..127638,127788..127901,128025..128092,128889..132378)
location: region:83802-132378:1
so has part: feature:83802-84096:1:exon
so has part: feature:84676-84774:1:exon
so has part: feature:106083-106143:1:exon
so has part: feature:107884-108015:1:exon
so has part: feature:113821-113904:1:exon
so has part: feature:115378-115459:1:exon
so has part: feature:117611-117693:1:exon
so has part: feature:118248-118361:1:exon
so has part: feature:119008-119121:1:exon
so has part: feature:124486-124632:1:exon
so has part: feature:126474-126580:1:exon
so has part: feature:126751-126831:1:exon
so has part: feature:127520-127638:1:exon
so has part: feature:127788-127901:1:exon
so has part: feature:128025-128092:1:exon
so has part: feature:128889-132378:1:exon

position:83802:1
position: 83802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83802-84096:1:exon

position:84096:1
position: 84096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:84676-84774:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:106083-106143:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107884-108015:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:113821-113904:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:115378-115459:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117611-117693:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:118248-118361:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:119008-119121:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:124486-124632:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:126474-126580:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:126751-126831:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:127520-127638:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:127788-127901:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:128025-128092:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:128889-132378:1:exon

USP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: USP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 3 isoform X3
translation: MVVLYLVVSVPWCGKAAAYLTCSLIAVSGSQVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQIPMTNHKKTEKQEKVQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTSDRHRKRKLLENSSLNSKLLKVNGSTAALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSVILQENSSLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRTKNQESGPMCTLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLVAVVVHHGSGVGSGHYTAYAAHEGRWFHFNDSTVTLTDEETVGKAKAYILFYVERQAKPGAEKL
SIO_010081: USP3
subclass of: SO_0000673
so part of: USP3
location: join(84681..84774,106083..106143,107884..108015,113821..113904,115378..115459,117611..117693,118248..118361,119008..119121,124486..124632,126474..126580,126751..126831,127520..127638,127788..127901,128025..128092,128889..129054)
location: region:84681-129054:1
so has part: feature:84681-84774:1:exon
so has part: feature:106083-106143:1:exon
so has part: feature:107884-108015:1:exon
so has part: feature:113821-113904:1:exon
so has part: feature:115378-115459:1:exon
so has part: feature:117611-117693:1:exon
so has part: feature:118248-118361:1:exon
so has part: feature:119008-119121:1:exon
so has part: feature:124486-124632:1:exon
so has part: feature:126474-126580:1:exon
so has part: feature:126751-126831:1:exon
so has part: feature:127520-127638:1:exon
so has part: feature:127788-127901:1:exon
so has part: feature:128025-128092:1:exon
so has part: feature:128889-129054:1:exon

XP_021403986.1
type: Protein
SIO_000068: ncbiprotein

position:84681:1
position: 84681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84681-84774:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106083-106143:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107884-108015:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:113821-113904:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:115378-115459:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:117611-117693:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:118248-118361:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:119008-119121:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:124486-124632:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:126474-126580:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:126751-126831:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:127520-127638:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:127788-127901:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:128025-128092:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:128889-129054:1:exon

FBXL22
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: FBXL22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 133004..138354
location: region:133004-138354:1
so has part: feature:133004-138354:1:exon
subclass of: SO_0000010

116184008
type: Gene
SIO_000068: ncbigene

position:133004:1
position: 133004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138354:1
position: 138354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133004-138354:1:exon

FBXL22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: FBXL22
product: F-box and leucine rich repeat protein 22
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031505759.1
SIO_010081: FBXL22
subclass of: SO_0000673
so part of: FBXL22
location: join(133004..134873,136735..138354)
location: region:133004-138354:1
so has part: feature:133004-134873:1:exon
so has part: feature:136735-138354:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:133004-134873:1:exon

position:134873:1
position: 134873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:136735-138354:1:exon

position:136735:1
position: 136735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FBXL22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: FBXL22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box and leucine-rich protein 22
translation: MHITQLNRECLLHLFSFLDKNSRKNLAKTCHKLLEVFQDPLLWSSLNFHSPVELKKDNFLLGPALKHLTICWYSERVKLCNIEDWMKSSFQKDFCKRHENTVSDFLLDVCNRCPNLLSVTLSGCGHVTDNCILQLLKNCPNLKSLKLENCVQITDHTLEAVTLHGASLQTLHVDFCRNVTQAGLEKVREKCPSVILRAERSASMIPDSKPERKLMLEKASRKLVQL
SIO_010081: FBXL22
subclass of: SO_0000673
so part of: FBXL22
location: join(134539..134873,136735..137080)
location: region:134539-137080:1
so has part: feature:134539-134873:1:exon
so has part: feature:136735-137080:1:exon

XP_031361619.1
type: Protein
SIO_000068: ncbiprotein

position:134539:1
position: 134539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137080:1
position: 137080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134539-134873:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:136735-137080:1:exon

HERC1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: HERC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(140928..214993)
location: region:140928-214993:-1
so has part: feature:140928-214993:-1:exon
subclass of: SO_0000010

110480404
type: Gene
SIO_000068: ncbigene

position:140928:-1
position: 140928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214993:-1
position: 214993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140928-214993:-1:exon

HERC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: HERC1
product: HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 51 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021548303.2
SIO_010081: HERC1
subclass of: SO_0000673
so part of: HERC1
location: complement(join(140928..141826,142643..142948,143659..143811,144041..144293,144715..144791,145087..145252,145426..145595,145831..146000,146291..146429,147709..147878,148874..148976,149550..149672,150175..150330,150923..151104,151570..151708,152126..152251,152372..152437,153426..153719,154024..154197,154339..154440,154993..155139,155679..155793,156272..156471,157395..157525,158363..158563,159144..159271,160462..160589,161139..161395,162043..162256,162645..162915,163108..163282,163887..164087,165318..165370,165890..166158,167278..167498,167739..167863,168620..168851,169029..169145,170312..170472,171376..171574,172273..173048,174590..175110,175582..175665,175872..176111,176744..176917,177002..177112,177344..177450,177678..177833,178755..178948,179858..180095,180623..180743,180829..181044,181348..181619,187399..187450,187713..187833,188941..189247,191646..191817,193154..193274,193369..193483,194722..194895,196350..196571,197078..197269,197779..197911,198089..198241,199410..199631,200418..200543,201079..201244,202004..202138,203186..203357,203449..203593,204435..204562,205129..205272,206832..206928,207512..207823,209444..209638,209933..210028,211237..214993))
location: region:140928-214993:-1
so has part: feature:211237-214993:-1:exon
so has part: feature:209933-210028:-1:exon
so has part: feature:209444-209638:-1:exon
so has part: feature:207512-207823:-1:exon
so has part: feature:206832-206928:-1:exon
so has part: feature:205129-205272:-1:exon
so has part: feature:204435-204562:-1:exon
so has part: feature:203449-203593:-1:exon
so has part: feature:203186-203357:-1:exon
so has part: feature:202004-202138:-1:exon
so has part: feature:201079-201244:-1:exon
so has part: feature:200418-200543:-1:exon
so has part: feature:199410-199631:-1:exon
so has part: feature:198089-198241:-1:exon
so has part: feature:197779-197911:-1:exon
so has part: feature:197078-197269:-1:exon
so has part: feature:196350-196571:-1:exon
so has part: feature:194722-194895:-1:exon
so has part: feature:193369-193483:-1:exon
so has part: feature:193154-193274:-1:exon
so has part: feature:191646-191817:-1:exon
so has part: feature:188941-189247:-1:exon
so has part: feature:187713-187833:-1:exon
so has part: feature:187399-187450:-1:exon
so has part: feature:181348-181619:-1:exon
so has part: feature:180829-181044:-1:exon
so has part: feature:180623-180743:-1:exon
so has part: feature:179858-180095:-1:exon
so has part: feature:178755-178948:-1:exon
so has part: feature:177678-177833:-1:exon
so has part: feature:177344-177450:-1:exon
so has part: feature:177002-177112:-1:exon
so has part: feature:176744-176917:-1:exon
so has part: feature:175872-176111:-1:exon
so has part: feature:175582-175665:-1:exon
so has part: feature:174590-175110:-1:exon
so has part: feature:172273-173048:-1:exon
so has part: feature:171376-171574:-1:exon
so has part: feature:170312-170472:-1:exon
so has part: feature:169029-169145:-1:exon
so has part: feature:168620-168851:-1:exon
so has part: feature:167739-167863:-1:exon
so has part: feature:167278-167498:-1:exon
so has part: feature:165890-166158:-1:exon
so has part: feature:165318-165370:-1:exon
so has part: feature:163887-164087:-1:exon
so has part: feature:163108-163282:-1:exon
so has part: feature:162645-162915:-1:exon
so has part: feature:162043-162256:-1:exon
so has part: feature:161139-161395:-1:exon
so has part: feature:160462-160589:-1:exon
so has part: feature:159144-159271:-1:exon
so has part: feature:158363-158563:-1:exon
so has part: feature:157395-157525:-1:exon
so has part: feature:156272-156471:-1:exon
so has part: feature:155679-155793:-1:exon
so has part: feature:154993-155139:-1:exon
so has part: feature:154339-154440:-1:exon
so has part: feature:154024-154197:-1:exon
so has part: feature:153426-153719:-1:exon
so has part: feature:152372-152437:-1:exon
so has part: feature:152126-152251:-1:exon
so has part: feature:151570-151708:-1:exon
so has part: feature:150923-151104:-1:exon
so has part: feature:150175-150330:-1:exon
so has part: feature:149550-149672:-1:exon
so has part: feature:148874-148976:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:211237-214993:-1:exon

position:211237:-1
position: 211237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:209933-210028:-1:exon

position:209933:-1
position: 209933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210028:-1
position: 210028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:209444-209638:-1:exon

position:209444:-1
position: 209444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209638:-1
position: 209638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:207512-207823:-1:exon

position:207512:-1
position: 207512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207823:-1
position: 207823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:206832-206928:-1:exon

position:206832:-1
position: 206832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206928:-1
position: 206928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:205129-205272:-1:exon

position:205129:-1
position: 205129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205272:-1
position: 205272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:204435-204562:-1:exon

position:204435:-1
position: 204435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204562:-1
position: 204562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:203449-203593:-1:exon

position:203449:-1
position: 203449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203593:-1
position: 203593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:203186-203357:-1:exon

position:203186:-1
position: 203186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203357:-1
position: 203357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:202004-202138:-1:exon

position:202004:-1
position: 202004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202138:-1
position: 202138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:201079-201244:-1:exon

position:201079:-1
position: 201079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201244:-1
position: 201244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:200418-200543:-1:exon

position:200418:-1
position: 200418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200543:-1
position: 200543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:199410-199631:-1:exon

position:199410:-1
position: 199410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199631:-1
position: 199631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:198089-198241:-1:exon

position:198089:-1
position: 198089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198241:-1
position: 198241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:197779-197911:-1:exon

position:197779:-1
position: 197779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197911:-1
position: 197911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:197078-197269:-1:exon

position:197078:-1
position: 197078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197269:-1
position: 197269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:196350-196571:-1:exon

position:196350:-1
position: 196350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196571:-1
position: 196571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:194722-194895:-1:exon

position:194722:-1
position: 194722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194895:-1
position: 194895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:193369-193483:-1:exon

position:193369:-1
position: 193369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193483:-1
position: 193483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:193154-193274:-1:exon

position:193154:-1
position: 193154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193274:-1
position: 193274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:191646-191817:-1:exon

position:191646:-1
position: 191646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191817:-1
position: 191817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:188941-189247:-1:exon

position:188941:-1
position: 188941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189247:-1
position: 189247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:187713-187833:-1:exon

position:187713:-1
position: 187713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187833:-1
position: 187833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:187399-187450:-1:exon

position:187399:-1
position: 187399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187450:-1
position: 187450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:181348-181619:-1:exon

position:181348:-1
position: 181348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181619:-1
position: 181619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:180829-181044:-1:exon

position:180829:-1
position: 180829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181044:-1
position: 181044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:180623-180743:-1:exon

position:180623:-1
position: 180623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180743:-1
position: 180743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:179858-180095:-1:exon

position:179858:-1
position: 179858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180095:-1
position: 180095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:178755-178948:-1:exon

position:178755:-1
position: 178755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178948:-1
position: 178948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:177678-177833:-1:exon

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urn:…
SIO_000300: 31
SIO_000628: feature:177344-177450:-1:exon

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urn:…
SIO_000300: 32
SIO_000628: feature:177002-177112:-1:exon

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urn:…
SIO_000300: 33
SIO_000628: feature:176744-176917:-1:exon

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urn:…
SIO_000300: 34
SIO_000628: feature:175872-176111:-1:exon

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urn:…
SIO_000300: 35
SIO_000628: feature:175582-175665:-1:exon

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urn:…
SIO_000300: 36
SIO_000628: feature:174590-175110:-1:exon

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urn:…
SIO_000300: 37
SIO_000628: feature:172273-173048:-1:exon

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urn:…
SIO_000300: 38
SIO_000628: feature:171376-171574:-1:exon

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urn:…
SIO_000300: 39
SIO_000628: feature:170312-170472:-1:exon

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SIO_000300: 40
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SIO_000300: 41
SIO_000628: feature:168620-168851:-1:exon

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SIO_000300: 42
SIO_000628: feature:167739-167863:-1:exon

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urn:…
SIO_000300: 43
SIO_000628: feature:167278-167498:-1:exon

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urn:…
SIO_000300: 44
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SIO_000300: 45
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urn:…
SIO_000300: 46
SIO_000628: feature:163887-164087:-1:exon

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SIO_000300: 47
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SIO_000300: 48
SIO_000628: feature:162645-162915:-1:exon

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SIO_000300: 49
SIO_000628: feature:162043-162256:-1:exon

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SIO_000300: 50
SIO_000628: feature:161139-161395:-1:exon

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urn:…
SIO_000300: 51
SIO_000628: feature:160462-160589:-1:exon

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urn:…
SIO_000300: 52
SIO_000628: feature:159144-159271:-1:exon

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urn:…
SIO_000300: 53
SIO_000628: feature:158363-158563:-1:exon

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urn:…
SIO_000300: 54
SIO_000628: feature:157395-157525:-1:exon

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SIO_000300: 55
SIO_000628: feature:156272-156471:-1:exon

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urn:…
SIO_000300: 56
SIO_000628: feature:155679-155793:-1:exon

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SIO_000300: 57
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urn:…
SIO_000300: 58
SIO_000628: feature:154339-154440:-1:exon

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urn:…
SIO_000300: 59
SIO_000628: feature:154024-154197:-1:exon

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urn:…
SIO_000300: 60
SIO_000628: feature:153426-153719:-1:exon

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urn:…
SIO_000300: 61
SIO_000628: feature:152372-152437:-1:exon

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SIO_000300: 62
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SIO_000300: 63
SIO_000628: feature:151570-151708:-1:exon

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SIO_000300: 64
SIO_000628: feature:150923-151104:-1:exon

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SIO_000300: 65
SIO_000628: feature:150175-150330:-1:exon

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urn:…
SIO_000300: 66
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SIO_000300: 68
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SIO_000300: 69
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SIO_000300: 71
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SIO_000300: 73
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SIO_000300: 74
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urn:…
SIO_000300: 75
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urn:…
SIO_000300: 76
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SIO_000300: 77
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HERC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: HERC1
product: HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 55 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021548304.2
SIO_010081: HERC1
subclass of: SO_0000673
so part of: HERC1
location: complement(join(140928..141826,142643..142948,143659..143811,144041..144293,144715..144791,145087..145252,145426..145595,145831..146000,146291..146429,147709..147878,148874..148976,149550..149672,150175..150330,150923..151104,151570..151708,152126..152251,152372..152437,153426..153719,154024..154197,154339..154440,154993..155139,155679..155793,156272..156471,157395..157525,158363..158563,159144..159271,160462..160589,161139..161395,162043..162256,162645..162915,163108..163282,163887..164087,165318..165370,165890..166158,167299..167498,167739..167863,168620..168851,169029..169145,170312..170472,171376..171574,172273..173048,174590..175110,175582..175665,175872..176111,176744..176920,177002..177112,177344..177450,177678..177833,178755..178948,179858..180095,180623..180743,180829..181044,181348..181619,187399..187450,187713..187833,188941..189247,191646..191817,193154..193274,193369..193483,194722..194895,196350..196571,197078..197269,197779..197911,198089..198241,199410..199631,200418..200543,201079..201244,202004..202138,203186..203357,203449..203593,204435..204562,205129..205272,206832..206928,207512..207823,209444..209638,209933..210028,211237..214992))
location: region:140928-214992:-1
so has part: feature:211237-214992:-1:exon
so has part: feature:209933-210028:-1:exon
so has part: feature:209444-209638:-1:exon
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so has part: feature:202004-202138:-1:exon
so has part: feature:201079-201244:-1:exon
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so has part: feature:199410-199631:-1:exon
so has part: feature:198089-198241:-1:exon
so has part: feature:197779-197911:-1:exon
so has part: feature:197078-197269:-1:exon
so has part: feature:196350-196571:-1:exon
so has part: feature:194722-194895:-1:exon
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so has part: feature:175872-176111:-1:exon
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so has part: feature:174590-175110:-1:exon
so has part: feature:172273-173048:-1:exon
so has part: feature:171376-171574:-1:exon
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so has part: feature:150175-150330:-1:exon
so has part: feature:149550-149672:-1:exon
so has part: feature:148874-148976:-1:exon

position:214992:-1
position: 214992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211237-214992:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209933-210028:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209444-209638:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:207512-207823:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206832-206928:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205129-205272:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:204435-204562:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:203449-203593:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:203186-203357:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:202004-202138:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:201079-201244:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:200418-200543:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:199410-199631:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:198089-198241:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:197779-197911:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:197078-197269:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:196350-196571:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:194722-194895:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:193369-193483:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:193154-193274:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:191646-191817:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:188941-189247:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:187713-187833:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:187399-187450:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:181348-181619:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:180829-181044:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:180623-180743:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:179858-180095:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:178755-178948:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:177678-177833:-1:exon

urn:…
SIO_000300: 31
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HERC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: HERC1
product: HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 55 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021548302.2
SIO_010081: HERC1
subclass of: SO_0000673
so part of: HERC1
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location: region:140928-214992:-1
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HERC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: HERC1
product: HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 55 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021548307.2
SIO_010081: HERC1
subclass of: SO_0000673
so part of: HERC1
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location: region:140928-212166:-1
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so has part: feature:157395-157525:-1:exon
so has part: feature:156272-156471:-1:exon
so has part: feature:155679-155793:-1:exon
so has part: feature:154993-155139:-1:exon
so has part: feature:154339-154440:-1:exon
so has part: feature:154024-154197:-1:exon
so has part: feature:153426-153719:-1:exon
so has part: feature:152372-152437:-1:exon
so has part: feature:152126-152251:-1:exon
so has part: feature:151570-151708:-1:exon
so has part: feature:150923-151104:-1:exon
so has part: feature:150175-150330:-1:exon
so has part: feature:149550-149672:-1:exon
so has part: feature:148874-148976:-1:exon

position:212166:-1
position: 212166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211237-212166:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209933-210028:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209444-209638:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:207512-207823:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206832-206928:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205129-205272:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:204435-204562:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:203449-203593:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:203186-203357:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:202004-202138:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:201079-201244:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:200418-200543:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:199410-199631:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:198089-198241:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:197779-197911:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:197078-197269:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:196350-196571:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:194722-194895:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:193369-193483:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:193154-193274:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:191646-191817:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:188941-189247:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:187713-187833:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:187399-187450:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:181348-181619:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:180829-181044:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:180623-180743:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:179858-180095:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:178755-178948:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:177678-177833:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:177344-177450:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:177002-177112:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:176744-176920:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:175872-176111:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:175582-175665:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:174590-175110:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:172273-173048:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:171376-171574:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:170312-170472:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:169029-169145:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:168620-168851:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:167739-167863:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:167278-167498:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:165890-166158:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:165318-165370:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:163887-164087:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:163108-163282:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:162645-162915:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:162043-162256:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:161139-161344:-1:exon

position:161344:-1
position: 161344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:160462-160589:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:159144-159271:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:158363-158563:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:157395-157525:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:156272-156471:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:155679-155793:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:154993-155139:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:154339-154440:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:154024-154197:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:153426-153719:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:152372-152437:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:152126-152251:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:151570-151708:-1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:150923-151104:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:150175-150330:-1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:149550-149672:-1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:148874-148976:-1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:147709-147878:-1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:146291-146429:-1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:145831-146000:-1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:145426-145595:-1:exon

urn:…
SIO_000300: 72
SIO_000628: feature:145087-145252:-1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:144715-144791:-1:exon

urn:…
SIO_000300: 74
SIO_000628: feature:144041-144293:-1:exon

urn:…
SIO_000300: 75
SIO_000628: feature:143659-143811:-1:exon

urn:…
SIO_000300: 76
SIO_000628: feature:142643-142948:-1:exon

urn:…
SIO_000300: 77
SIO_000628: feature:140928-141826:-1:exon

HERC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: HERC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable E3 ubiquitin-protein ligase HERC1 isoform X2
translation: MAAMVPPVKLKWLEHLNSSWITEDSESIATREGVSVLYAKLVSNKEVVPLPQQVLCLKGPQLPDFERESLSSDEQDHYLDALLSSQLALAKMVCSDSPFAGALRKRLLVLQRVFYALSNKYHDKGKVKQQQHSPESSSGSTDVHSVSERPRSSTDALIEMGVRTGLSLLFALLRQSWMMPVAGPGLSLCNDVIYTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLKGVTIPNSGADTLGRRLASELLLGLAAQRGALRYLLEWIEMALGASAVVNTMEKTKLLQSPEGMISFDCFMSILTQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLEHYCDKINSEIPPLPFPSSREHHNFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSSVPDEIQEVVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVASLLGYSSPSDTTETASMCISCGNLSDQAYAVQSSHPDTHLAEILMKTLLRNLGFYTDQAFGELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAYCHINSVTENSSSVALLHKHLQLLLPHATDIYSRSATLLKESSWNGSVGEKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARPLLSYLLDLLPPLDRLNRLLPAAALLEDQELQWPLHGGPELIDPAGVPLPQPAQSWVWLVDLERTVALLIGRCLGGMLQGPPVSPEEQDTAYWLKTPLFSDGVEMDIPHLDKCMSSLLEVALSGNEEQKPFDYKLRPEITVYVDLALGCTKEPARSLWISMQDYAVSKDWDTATLSNESLLDTVSRFVLAALLKHTSLLSQACGESRYQPGKALAEVYRCVYKVRSRLLACKNMELIQTRSSSRDRWMLDNQESADVDTQEHSFTRTIDEEAEMEEQAERDREEEHPEQEDEEEEREHEAMTAGKIFQCFLSAREVARSRDRDRMSTGTGTRVDDPPAQSQQERRISTDLTEGQDVYTAACNSVIHRCALLILGVSPAIEELQKRREDGQLQQPPSAVPEGIGLMTRSESLTAESRSIHANSSYRLMKSRSESDLSQPESDEEGYSLSGRRNVDVDLAASHRKRGAIHSQMESLSDSWVRLKHSRDWLYTSSSSFVESDFDLSRSLGIHTLIENAVSFVSGDVGNSPGFKEPEESMSTSPQASIIAMEQQQLRAELRLEALHQILVLLSGMEEKGCVPLMGSRQVPGFQSSLLLTSVRLQFLAGCFGLGTVGHAGAKGESVRLHHYQDGIRAAKRSIQIEIQVAVHKIYQQLSATLERALQANKHHIEAQQRLLLVTVFALSVHYQPVDVSLAISTGLLNVLSQLCGTDTMLGQPLQLLPKTGISQLSTALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQAGVMLMASFGDGEGEEGEVESKKADSNGDNEKRDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASPKWTEVLLNIASQKCCSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQVVEQLFSLLSDCMWESPIAQAK…
SIO_010081: HERC1
subclass of: SO_0000673
so part of: HERC1
location: complement(join(141641..141826,142643..142948,143659..143811,144041..144293,144715..144791,145087..145252,145426..145595,145831..146000,146291..146429,147709..147878,148874..148976,149550..149672,150175..150330,150923..151104,151570..151708,152126..152251,152372..152437,153426..153719,154024..154197,154339..154440,154993..155139,155679..155793,156272..156471,157395..157525,158363..158563,159144..159271,160462..160589,161139..161395,162043..162256,162645..162915,163108..163282,163887..164087,165318..165370,165890..166158,167278..167498,167739..167863,168620..168851,169029..169145,170312..170472,171376..171574,172273..173048,174590..175110,175582..175665,175872..176111,176744..176917,177002..177112,177344..177450,177678..177833,178755..178948,179858..180095,180623..180743,180829..181044,181348..181619,187399..187450,187713..187833,188941..189247,191646..191817,193154..193274,193369..193483,194722..194895,196350..196571,197078..197269,197779..197911,198089..198241,199410..199631,200418..200543,201079..201244,202004..202138,203186..203357,203449..203593,204435..204562,205129..205272,206832..206928,207512..207823,209444..209638,209933..210028,211237..212166))
location: region:141641-212166:-1
so has part: feature:211237-212166:-1:exon
so has part: feature:209933-210028:-1:exon
so has part: feature:209444-209638:-1:exon
so has part: feature:207512-207823:-1:exon
so has part: feature:206832-206928:-1:exon
so has part: feature:205129-205272:-1:exon
so has part: feature:204435-204562:-1:exon
so has part: feature:203449-203593:-1:exon
so has part: feature:203186-203357:-1:exon
so has part: feature:202004-202138:-1:exon
so has part: feature:201079-201244:-1:exon
so has part: feature:200418-200543:-1:exon
so has part: feature:199410-199631:-1:exon
so has part: feature:198089-198241:-1:exon
so has part: feature:197779-197911:-1:exon
so has part: feature:197078-197269:-1:exon
so has part: feature:196350-196571:-1:exon
so has part: feature:194722-194895:-1:exon
so has part: feature:193369-193483:-1:exon
so has part: feature:193154-193274:-1:exon
so has part: feature:191646-191817:-1:exon
so has part: feature:188941-189247:-1:exon
so has part: feature:187713-187833:-1:exon
so has part: feature:187399-187450:-1:exon
so has part: feature:181348-181619:-1:exon
so has part: feature:180829-181044:-1:exon
so has part: feature:180623-180743:-1:exon
so has part: feature:179858-180095:-1:exon
so has part: feature:178755-178948:-1:exon
so has part: feature:177678-177833:-1:exon
so has part: feature:177344-177450:-1:exon
so has part: feature:177002-177112:-1:exon
so has part: feature:176744-176917:-1:exon
so has part: feature:175872-176111:-1:exon
so has part: feature:175582-175665:-1:exon
so has part: feature:174590-175110:-1:exon
so has part: feature:172273-173048:-1:exon
so has part: feature:171376-171574:-1:exon
so has part: feature:170312-170472:-1:exon
so has part: feature:169029-169145:-1:exon
so has part: feature:168620-168851:-1:exon
so has part: feature:167739-167863:-1:exon
so has part: feature:167278-167498:-1:exon
so has part: feature:165890-166158:-1:exon
so has part: feature:165318-165370:-1:exon
so has part: feature:163887-164087:-1:exon
so has part: feature:163108-163282:-1:exon
so has part: feature:162645-162915:-1:exon
so has part: feature:162043-162256:-1:exon
so has part: feature:161139-161395:-1:exon
so has part: feature:160462-160589:-1:exon
so has part: feature:159144-159271:-1:exon
so has part: feature:158363-158563:-1:exon
so has part: feature:157395-157525:-1:exon
so has part: feature:156272-156471:-1:exon
so has part: feature:155679-155793:-1:exon
so has part: feature:154993-155139:-1:exon
so has part: feature:154339-154440:-1:exon
so has part: feature:154024-154197:-1:exon
so has part: feature:153426-153719:-1:exon
so has part: feature:152372-152437:-1:exon
so has part: feature:152126-152251:-1:exon
so has part: feature:151570-151708:-1:exon
so has part: feature:150923-151104:-1:exon
so has part: feature:150175-150330:-1:exon
so has part: feature:149550-149672:-1:exon

XP_021403978.1
type: Protein
SIO_000068: ncbiprotein

position:141641:-1
position: 141641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211237-212166:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209933-210028:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209444-209638:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:207512-207823:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206832-206928:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205129-205272:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:204435-204562:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:203449-203593:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:203186-203357:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:202004-202138:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:201079-201244:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:200418-200543:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:199410-199631:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:198089-198241:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:197779-197911:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:197078-197269:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:196350-196571:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:194722-194895:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:193369-193483:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:193154-193274:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:191646-191817:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:188941-189247:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:187713-187833:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:187399-187450:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:181348-181619:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:180829-181044:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:180623-180743:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:179858-180095:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:178755-178948:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:177678-177833:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:177344-177450:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:177002-177112:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:176744-176917:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:175872-176111:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:175582-175665:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:174590-175110:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:172273-173048:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:171376-171574:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:170312-170472:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:169029-169145:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:168620-168851:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:167739-167863:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:167278-167498:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:165890-166158:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:165318-165370:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:163887-164087:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:163108-163282:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:162645-162915:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:162043-162256:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:161139-161395:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:160462-160589:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:159144-159271:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:158363-158563:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:157395-157525:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:156272-156471:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:155679-155793:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:154993-155139:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:154339-154440:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:154024-154197:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:153426-153719:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:152372-152437:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:152126-152251:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:151570-151708:-1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:150923-151104:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:150175-150330:-1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:149550-149672:-1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:148874-148976:-1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:147709-147878:-1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:146291-146429:-1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:145831-146000:-1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:145426-145595:-1:exon

urn:…
SIO_000300: 72
SIO_000628: feature:145087-145252:-1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:144715-144791:-1:exon

urn:…
SIO_000300: 74
SIO_000628: feature:144041-144293:-1:exon

urn:…
SIO_000300: 75
SIO_000628: feature:143659-143811:-1:exon

urn:…
SIO_000300: 76
SIO_000628: feature:142643-142948:-1:exon

urn:…
SIO_000300: 77
SIO_000628: feature:141641-141826:-1:exon

HERC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: HERC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable E3 ubiquitin-protein ligase HERC1 isoform X3
translation: MAAMVPPVKLKWLEHLNSSWITEDSESIATREGVSVLYAKLVSNKEVVPLPQQVLCLKGPQLPDFERESLSSDEQDHYLDALLSSQLALAKMVCSDSPFAGALRKRLLVLQRVFYALSNKYHDKGKVKQQQHSPESSSGSTDVHSVSERPRSSTDALIEMGVRTGLSLLFALLRQSWMMPVAGPGLSLCNDVIYTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLKGVTIPNSGADTLGRRLASELLLGLAAQRGALRYLLEWIEMALGASAVVNTMEKTKLLQSPEGMISFDCFMSILTQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLEHYCDKINSEIPPLPFPSSREHHNFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSSVPDEIQEVVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVASLLGYSSPSDTTETASMCISCGNLSDQAYAVQSSHPDTHLAEILMKTLLRNLGFYTDQAFGELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAYCHINSVTENSSSVALLHKHLQLLLPHATDIYSRSATLLKESSWNGSVGEKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARPLLSYLLDLLPPLDRLNRLLPAAALLEDQELQWPLHGGPELIDPAGVPLPQPAQSWVWLVDLERTVALLIGRCLGGMLQGPPVSPEEQDTAYWLKTPLFSDGVEMDIPHLDKCMSSLLEVALSGNEEQKPFDYKLRPEITVYVDLALGCTKEPARSLWISMQDYAVSKDWDTATLSNESLLDTVSRFVLAALLKHTSLLSQACGESRYQPGKALAEVYRCVYKVRSRLLACKNMELIQTRSSSRDRWMLDNQESADVDTQEHSFTRTIDEEAEMEEQAERDREEEHPEQEDEEEEREHEAMTAGKIFQCFLSAREVARSRDRDRMSTGTGTRVDDPPAQSQQERRISTDLTEGQDVYTAACNSVIHRCALLILGVSPAIEELQKRREDGQLQQPPSAVPEGIGLMTRSESLTAESRSIHANSSYRLMKSRSESDLSQPESDEEGYSLSGRRNVDVDLAASHRKRGAIHSQMESLSDSWVRLKHSRDWLYTSSSSFVESDFDLSRSLGIHTLIENAVSFVSGDVGNSPGFKEPEESMSTSPQASIIAMEQQQLRAELRLEALHQILVLLSGMEEKGCVPLMGSRQVPGFQSSLLLTSVRLQFLAGCFGLGTVGHAGAKGESVRLHHYQDGIRAAKRSIQIEIQVAVHKIYQQLSATLERALQANKHHIEAQQRLLLVTVFALSVHYQPVDVSLAISTGLLNVLSQLCGTDTMLGQPLQLLPKTGISQLSTALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQAGVMLMASFGDGEGEEGEVESKKADSNGDNEKRDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASPKWTEVLLNIASQKCCSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQVVEQLFSLLSDCMWESPIAQAK…
SIO_010081: HERC1
subclass of: SO_0000673
so part of: HERC1
location: complement(join(141641..141826,142643..142948,143659..143811,144041..144293,144715..144791,145087..145252,145426..145595,145831..146000,146291..146429,147709..147878,148874..148976,149550..149672,150175..150330,150923..151104,151570..151708,152126..152251,152372..152437,153426..153719,154024..154197,154339..154440,154993..155139,155679..155793,156272..156471,157395..157525,158363..158563,159144..159271,160462..160589,161139..161395,162043..162256,162645..162915,163108..163282,163887..164087,165318..165370,165890..166158,167299..167498,167739..167863,168620..168851,169029..169145,170312..170472,171376..171574,172273..173048,174590..175110,175582..175665,175872..176111,176744..176920,177002..177112,177344..177450,177678..177833,178755..178948,179858..180095,180623..180743,180829..181044,181348..181619,187399..187450,187713..187833,188941..189247,191646..191817,193154..193274,193369..193483,194722..194895,196350..196571,197078..197269,197779..197911,198089..198241,199410..199631,200418..200543,201079..201244,202004..202138,203186..203357,203449..203593,204435..204562,205129..205272,206832..206928,207512..207823,209444..209638,209933..210028,211237..212166))
location: region:141641-212166:-1
so has part: feature:211237-212166:-1:exon
so has part: feature:209933-210028:-1:exon
so has part: feature:209444-209638:-1:exon
so has part: feature:207512-207823:-1:exon
so has part: feature:206832-206928:-1:exon
so has part: feature:205129-205272:-1:exon
so has part: feature:204435-204562:-1:exon
so has part: feature:203449-203593:-1:exon
so has part: feature:203186-203357:-1:exon
so has part: feature:202004-202138:-1:exon
so has part: feature:201079-201244:-1:exon
so has part: feature:200418-200543:-1:exon
so has part: feature:199410-199631:-1:exon
so has part: feature:198089-198241:-1:exon
so has part: feature:197779-197911:-1:exon
so has part: feature:197078-197269:-1:exon
so has part: feature:196350-196571:-1:exon
so has part: feature:194722-194895:-1:exon
so has part: feature:193369-193483:-1:exon
so has part: feature:193154-193274:-1:exon
so has part: feature:191646-191817:-1:exon
so has part: feature:188941-189247:-1:exon
so has part: feature:187713-187833:-1:exon
so has part: feature:187399-187450:-1:exon
so has part: feature:181348-181619:-1:exon
so has part: feature:180829-181044:-1:exon
so has part: feature:180623-180743:-1:exon
so has part: feature:179858-180095:-1:exon
so has part: feature:178755-178948:-1:exon
so has part: feature:177678-177833:-1:exon
so has part: feature:177344-177450:-1:exon
so has part: feature:177002-177112:-1:exon
so has part: feature:176744-176920:-1:exon
so has part: feature:175872-176111:-1:exon
so has part: feature:175582-175665:-1:exon
so has part: feature:174590-175110:-1:exon
so has part: feature:172273-173048:-1:exon
so has part: feature:171376-171574:-1:exon
so has part: feature:170312-170472:-1:exon
so has part: feature:169029-169145:-1:exon
so has part: feature:168620-168851:-1:exon
so has part: feature:167739-167863:-1:exon
so has part: feature:167299-167498:-1:exon
so has part: feature:165890-166158:-1:exon
so has part: feature:165318-165370:-1:exon
so has part: feature:163887-164087:-1:exon
so has part: feature:163108-163282:-1:exon
so has part: feature:162645-162915:-1:exon
so has part: feature:162043-162256:-1:exon
so has part: feature:161139-161395:-1:exon
so has part: feature:160462-160589:-1:exon
so has part: feature:159144-159271:-1:exon
so has part: feature:158363-158563:-1:exon
so has part: feature:157395-157525:-1:exon
so has part: feature:156272-156471:-1:exon
so has part: feature:155679-155793:-1:exon
so has part: feature:154993-155139:-1:exon
so has part: feature:154339-154440:-1:exon
so has part: feature:154024-154197:-1:exon
so has part: feature:153426-153719:-1:exon
so has part: feature:152372-152437:-1:exon
so has part: feature:152126-152251:-1:exon
so has part: feature:151570-151708:-1:exon
so has part: feature:150923-151104:-1:exon
so has part: feature:150175-150330:-1:exon
so has part: feature:149550-149672:-1:exon

XP_021403979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211237-212166:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209933-210028:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209444-209638:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:207512-207823:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206832-206928:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205129-205272:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:204435-204562:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:203449-203593:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:203186-203357:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:202004-202138:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:201079-201244:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:200418-200543:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:199410-199631:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:198089-198241:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:197779-197911:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:197078-197269:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:196350-196571:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:194722-194895:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:193369-193483:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:193154-193274:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:191646-191817:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:188941-189247:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:187713-187833:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:187399-187450:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:181348-181619:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:180829-181044:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:180623-180743:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:179858-180095:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:178755-178948:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:177678-177833:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:177344-177450:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:177002-177112:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:176744-176920:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:175872-176111:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:175582-175665:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:174590-175110:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:172273-173048:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:171376-171574:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:170312-170472:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:169029-169145:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:168620-168851:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:167739-167863:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:167299-167498:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:165890-166158:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:165318-165370:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:163887-164087:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:163108-163282:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:162645-162915:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:162043-162256:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:161139-161395:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:160462-160589:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:159144-159271:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:158363-158563:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:157395-157525:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:156272-156471:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:155679-155793:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:154993-155139:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:154339-154440:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:154024-154197:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:153426-153719:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:152372-152437:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:152126-152251:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:151570-151708:-1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:150923-151104:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:150175-150330:-1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:149550-149672:-1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:148874-148976:-1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:147709-147878:-1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:146291-146429:-1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:145831-146000:-1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:145426-145595:-1:exon

urn:…
SIO_000300: 72
SIO_000628: feature:145087-145252:-1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:144715-144791:-1:exon

urn:…
SIO_000300: 74
SIO_000628: feature:144041-144293:-1:exon

urn:…
SIO_000300: 75
SIO_000628: feature:143659-143811:-1:exon

urn:…
SIO_000300: 76
SIO_000628: feature:142643-142948:-1:exon

urn:…
SIO_000300: 77
SIO_000628: feature:141641-141826:-1:exon

HERC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: HERC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable E3 ubiquitin-protein ligase HERC1 isoform X4
translation: MAAMVPPVKLKWLEHLNSSWITEDSESIATREGVSVLYAKLVSNKEVVPLPQQVLCLKGPQLPDFERESLSSDEQDHYLDALLSSQLALAKMVCSDSPFAGALRKRLLVLQRVFYALSNKYHDKGKVKQQQHSPESSSGSTDVHSVSERPRSSTDALIEMGVRTGLSLLFALLRQSWMMPVAGPGLSLCNDVIYTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLKGVTIPNSGADTLGRRLASELLLGLAAQRGALRYLLEWIEMALGASAVVNTMEKTKLLQSPEGMISFDCFMSILTQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLEHYCDKINSEIPPLPFPSSREHHNFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSSVPDEIQEVVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVASLLGYSSPSDTTETASMCISCGNLSDQAYAVQSSHPDTHLAEILMKTLLRNLGFYTDQAFGELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAYCHINSVTENSSSVALLHKHLQLLLPHATDIYSRSATLLKESSWNGSVGEKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARPLLSYLLDLLPPLDRLNRLLPAAALLEDQELQWPLHGGPELIDPAGVPLPQPAQSWVWLVDLERTVALLIGRCLGGMLQGPPVSPEEQDTAYWLKTPLFSDGVEMDIPHLDKCMSSLLEVALSGNEEQKPFDYKLRPEITVYVDLALGCTKEPARSLWISMQDYAVSKDWDTATLSNESLLDTVSRFVLAALLKHTSLLSQACGESRYQPGKALAEVYRCVYKVRSRLLACKNMELIQTRSSSRDRWMLDNQESADVDTQEHSFTRTIDEEAEMEEQAERDREEEHPEQEDEEEEREHEAMTAGKIFQCFLSAREVARSRDRDRMSTGTGTRVDDPPAQSQQERRISTDLTEGQDVYTAACNSVIHRCALLILGVSPAIEELQKRREDGQLQQPPSAVPEGIGLMTRSESLTAESRSIHANSSYRLMKSRSESDLSQPESDEEGYSLSGRRNVDVDLAASHRKRGAIHSQMESLSDSWVRLKHSRDWLYTSSSSFVESDFDLSRSLGIHTLIENAVSFVSGDVGNSPGFKEPEESMSTSPQASIIAMEQQQLRAELRLEALHQILVLLSGMEEKGCVPLMGSRQVPGFQSSLLLTSVRLQFLAGCFGLGTVGHAGAKGESVRLHHYQDGIRAAKRSIQIEIQVAVHKIYQQLSATLERALQANKHHIEAQQRLLLVTVFALSVHYQPVDVSLAISTGLLNVLSQLCGTDTMLGQPLQLLPKTGISQLSTALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQAGVMLMASFGDGEGEEGEVESKKADSNGDNEKRDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASPKWTEVLLNIASQKCCSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQVVEQLFSLLSDCMWESPIAQAK…
SIO_010081: HERC1
subclass of: SO_0000673
so part of: HERC1
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XP_021403982.1
type: Protein
SIO_000068: ncbiprotein

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HERC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: HERC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable E3 ubiquitin-protein ligase HERC1 isoform X1
translation: MAAMVPPVKLKWLEHLNSSWITEDSESIATREGVSVLYAKLVSNKEVVPLPQQVLCLKGPQLPDFERESLSSDEQDHYLDALLSSQLALAKMVCSDSPFAGALRKRLLVLQRVFYALSNKYHDKGKVKQQQHSPESSSGSTDVHSVSERPRSSTDALIEMGVRTGLSLLFALLRQSWMMPVAGPGLSLCNDVIYTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLKGVTIPNSGADTLGRRLASELLLGLAAQRGALRYLLEWIEMALGASAVVNTMEKTKLLQSPEGMISFDCFMSILTQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLEHYCDKINSEIPPLPFPSSREHHNFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSSVPDEIQEVVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVASLLGYSSPSDTTETASMCISCGNLSDQAYAVQSSHPDTHLAEILMKTLLRNLGFYTDQAFGELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAYCHINSVTENSSSVALLHKHLQLLLPHATDIYSRSATLLKESSWNGSVGEKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARPLLSYLLDLLPPLDRLNRLLPAAALLEDQELQWPLHGGPELIDPAGVPLPQPAQSWVWLVDLERTVALLIGRCLGGMLQGPPVSPEEQDTAYWLKTPLFSDGVEMDIPHLDKCMSSLLEVALSGNEEQKPFDYKLRPEITVYVDLALGCTKEPARSLWISMQDYAVSKDWDTATLSNESLLDTVSRFVLAALLKHTSLLSQACGESRYQPGKALAEVYRCVYKVRSRLLACKNMELIQTRSSSRDRWMLDNQESADVDTQEHSFTRTIDEEAEMEEQAERDREEEHPEQEDEEEEREHEAMTAGKIFQCFLSAREVARSRDRDRMSTGTGTRVDDPPAQSQQERRISTDLTEGQDVYTAACNSVIHRCALLILGVSPAIEELQKRREDGQLQQPPSAVPEGIGLMTRSESLTAESRSIHANSSYRLMKSRSESDLSQPESDEEGYSLSGRRNVDVDLAASHRKRGAIHSQMESLSDSWVRLKHSRDWLYTSSSSFVESDFDLSRSLGIHTLIENAVSFVSGDVGNSPGFKEPEESMSTSPQASIIAMEQQQLRAELRLEALHQILVLLSGMEEKGCVPLMGSRQVPGFQSSLLLTSVRLQFLAGCFGLGTVGHAGAKGESVRLHHYQDGIRAAKRSIQIEIQVAVHKIYQQLSATLERALQANKHHIEAQQRLLLVTVFALSVHYQPVDVSLAISTGLLNVLSQLCGTDTMLGQPLQLLPKTGISQLSTALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQAGVMLMASFGDGEGEEGEVESKKADSNGDNEKRDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASPKWTEVLLNIASQKCCSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQVVEQLFSLLSDCMWESPIAQAK…
SIO_010081: HERC1
subclass of: SO_0000673
so part of: HERC1
location: complement(join(141641..141826,142643..142948,143659..143811,144041..144293,144715..144791,145087..145252,145426..145595,145831..146000,146291..146429,147709..147878,148874..148976,149550..149672,150175..150330,150923..151104,151570..151708,152126..152251,152372..152437,153426..153719,154024..154197,154339..154440,154993..155139,155679..155793,156272..156471,157395..157525,158363..158563,159144..159271,160462..160589,161139..161395,162043..162256,162645..162915,163108..163282,163887..164087,165318..165370,165890..166158,167278..167498,167739..167863,168620..168851,169029..169145,170312..170472,171376..171574,172273..173048,174590..175110,175582..175665,175872..176111,176744..176920,177002..177112,177344..177450,177678..177833,178755..178948,179858..180095,180623..180743,180829..181044,181348..181619,187399..187450,187713..187833,188941..189247,191646..191817,193154..193274,193369..193483,194722..194895,196350..196571,197078..197269,197779..197911,198089..198241,199410..199631,200418..200543,201079..201244,202004..202138,203186..203357,203449..203593,204435..204562,205129..205272,206832..206928,207512..207823,209444..209638,209933..210028,211237..212166))
location: region:141641-212166:-1
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XP_021403977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211237-212166:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209933-210028:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209444-209638:-1:exon

urn:…
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SIO_000628: feature:207512-207823:-1:exon

urn:…
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SIO_000628: feature:206832-206928:-1:exon

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SIO_000628: feature:205129-205272:-1:exon

urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:199410-199631:-1:exon

urn:…
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SIO_000628: feature:198089-198241:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:197779-197911:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:197078-197269:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:196350-196571:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:194722-194895:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:193369-193483:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:193154-193274:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:191646-191817:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:188941-189247:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:187713-187833:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:187399-187450:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:181348-181619:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:180829-181044:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:180623-180743:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:179858-180095:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:178755-178948:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:177678-177833:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:177344-177450:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:177002-177112:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:176744-176920:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:175872-176111:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:175582-175665:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:174590-175110:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:172273-173048:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:171376-171574:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:170312-170472:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:169029-169145:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:168620-168851:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:167739-167863:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:167278-167498:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:165890-166158:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:165318-165370:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:163887-164087:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:163108-163282:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:162645-162915:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:162043-162256:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:161139-161395:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:160462-160589:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:159144-159271:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:158363-158563:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:157395-157525:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:156272-156471:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:155679-155793:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:154993-155139:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:154339-154440:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:154024-154197:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:153426-153719:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:152372-152437:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:152126-152251:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:151570-151708:-1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:150923-151104:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:150175-150330:-1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:149550-149672:-1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:148874-148976:-1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:147709-147878:-1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:146291-146429:-1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:145831-146000:-1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:145426-145595:-1:exon

urn:…
SIO_000300: 72
SIO_000628: feature:145087-145252:-1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:144715-144791:-1:exon

urn:…
SIO_000300: 74
SIO_000628: feature:144041-144293:-1:exon

urn:…
SIO_000300: 75
SIO_000628: feature:143659-143811:-1:exon

urn:…
SIO_000300: 76
SIO_000628: feature:142643-142948:-1:exon

urn:…
SIO_000300: 77
SIO_000628: feature:141641-141826:-1:exon

LOC116184004
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116184004
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<217681..255210)
location: region:217681-255210:-1
so has part: feature:217681-255210:-1:exon
subclass of: SO_0000010

116184004
type: Gene
SIO_000068: ncbigene

position:217681:-1
position: 217681
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:255210:-1
position: 255210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217681-255210:-1:exon

LOC116184004
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC116184004
product: probable E3 ubiquitin-protein ligase HERC1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031505736.1
SIO_010081: LOC116184004
subclass of: SO_0000673
so part of: LOC116184004
location: complement(join(<217681..217696,218459..218593,219641..219812,219904..220048,220890..221017,221584..221727,223287..223383,223967..224278,225899..226093,226388..226483,227692..228647,254955..255210))
location: region:217681-255210:-1
so has part: feature:254955-255210:-1:exon
so has part: feature:227692-228647:-1:exon
so has part: feature:226388-226483:-1:exon
so has part: feature:225899-226093:-1:exon
so has part: feature:223967-224278:-1:exon
so has part: feature:223287-223383:-1:exon
so has part: feature:221584-221727:-1:exon
so has part: feature:220890-221017:-1:exon
so has part: feature:219904-220048:-1:exon
so has part: feature:219641-219812:-1:exon
so has part: feature:218459-218593:-1:exon
so has part: feature:217681-217696:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:254955-255210:-1:exon

position:254955:-1
position: 254955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:227692-228647:-1:exon

position:227692:-1
position: 227692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228647:-1
position: 228647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:226388-226483:-1:exon

position:226388:-1
position: 226388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226483:-1
position: 226483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:225899-226093:-1:exon

position:225899:-1
position: 225899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226093:-1
position: 226093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:223967-224278:-1:exon

position:223967:-1
position: 223967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224278:-1
position: 224278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:223287-223383:-1:exon

position:223287:-1
position: 223287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223383:-1
position: 223383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:221584-221727:-1:exon

position:221584:-1
position: 221584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221727:-1
position: 221727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:220890-221017:-1:exon

position:220890:-1
position: 220890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221017:-1
position: 221017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:219904-220048:-1:exon

position:219904:-1
position: 219904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220048:-1
position: 220048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:219641-219812:-1:exon

position:219641:-1
position: 219641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219812:-1
position: 219812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:218459-218593:-1:exon

position:218459:-1
position: 218459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218593:-1
position: 218593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:217681-217696:-1:exon

position:217696:-1
position: 217696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116184004
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC116184004
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable E3 ubiquitin-protein ligase HERC1
translation: MAAMVPPVKLKWLEHLNSSWITEDSESIATREGVSVLYAKLVSNKEVVPLPQQVLCLKGPQLPDFERESLSSDEQDHYLDALLSSQLALAKMVCSDSPFAGALRKRLLVLQRVFYALSNKYHDKGKVKQQQHSPESSSGSTDVHSVSERPRSSTDALIEMGVRTGLSLLFALLRQSWMMPVAGPGLSLCNDVIYTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLKGVTIPNSGADTLGRRLASELLLGLAAQRGALRYLLEWIEMALGASAVVNTMEKTKLLQSPEGMISFDCFMSILTQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLEHYCDKINSEIPPLPFPSSREHHNF
SIO_010081: LOC116184004
subclass of: SO_0000673
so part of: LOC116184004
location: complement(join(<217681..217696,218459..218593,219641..219812,219904..220048,220890..221017,221584..221727,223287..223383,223967..224278,225899..226093,226388..226483,227692..228621))
location: region:217681-228621:-1
so has part: feature:227692-228621:-1:exon
so has part: feature:226388-226483:-1:exon
so has part: feature:225899-226093:-1:exon
so has part: feature:223967-224278:-1:exon
so has part: feature:223287-223383:-1:exon
so has part: feature:221584-221727:-1:exon
so has part: feature:220890-221017:-1:exon
so has part: feature:219904-220048:-1:exon
so has part: feature:219641-219812:-1:exon
so has part: feature:218459-218593:-1:exon
so has part: feature:217681-217696:-1:exon

XP_031361596.1
type: Protein
SIO_000068: ncbiprotein

position:228621:-1
position: 228621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227692-228621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:226388-226483:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:225899-226093:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:223967-224278:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:223287-223383:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:221584-221727:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:220890-221017:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:219904-220048:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:219641-219812:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:218459-218593:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:217681-217696:-1:exon

DAPK2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: DAPK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(267495..325365)
location: region:267495-325365:-1
so has part: feature:267495-325365:-1:exon
subclass of: SO_0000010

110479829
type: Gene
SIO_000068: ncbigene

position:267495:-1
position: 267495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325365:-1
position: 325365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267495-325365:-1:exon

DAPK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: DAPK2
product: death associated protein kinase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021547363.1
SIO_010081: DAPK2
subclass of: SO_0000673
so part of: DAPK2
location: complement(join(267495..269348,270254..270299,271758..271910,275968..275994,276676..276724,277875..278004,279393..279531,292379..292600,318375..318471,325321..325365))
location: region:267495-325365:-1
so has part: feature:325321-325365:-1:exon
so has part: feature:318375-318471:-1:exon
so has part: feature:292379-292600:-1:exon
so has part: feature:279393-279531:-1:exon
so has part: feature:277875-278004:-1:exon
so has part: feature:276676-276724:-1:exon
so has part: feature:275968-275994:-1:exon
so has part: feature:271758-271910:-1:exon
so has part: feature:270254-270299:-1:exon
so has part: feature:267495-269348:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:325321-325365:-1:exon

position:325321:-1
position: 325321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:318375-318471:-1:exon

position:318375:-1
position: 318375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318471:-1
position: 318471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:292379-292600:-1:exon

position:292379:-1
position: 292379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292600:-1
position: 292600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:279393-279531:-1:exon

position:279393:-1
position: 279393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279531:-1
position: 279531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:277875-278004:-1:exon

position:277875:-1
position: 277875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278004:-1
position: 278004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:276676-276724:-1:exon

position:276676:-1
position: 276676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276724:-1
position: 276724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:275968-275994:-1:exon

position:275968:-1
position: 275968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275994:-1
position: 275994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:271758-271910:-1:exon

position:271758:-1
position: 271758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271910:-1
position: 271910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:270254-270299:-1:exon

position:270254:-1
position: 270254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270299:-1
position: 270299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:267495-269348:-1:exon

position:269348:-1
position: 269348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DAPK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: DAPK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: death-associated protein kinase 2
translation: MAFFKQQKVEDIYEIGEELGSGQFAIVKKCREKSTGVEYAAKFIKKRQSQASRRGVSREEIEREVTILQQILHINIVKLHDIYENKTDVVLILELVSGGELFDFLAQKESLSEEEATQFIKQILDGVNYLHSKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHKIEDGVEFKNIFGTPEFVAPEIINYEPLGLAADMWSIGVITYILLSGASPFLGETKQETLSNITAVNYDFDEEFFSNTSDLAKDFIQKLLVKDTRKRLTIQEALSHPWIMLKDENKVQENKKVENTQLKTKHLREYTIKCHSSMPPNNTYINFERFARIVEDISHVEQGFIMLAASHDSLQEDIDVLLSIYNEKEAWYKEESESVRHTLSQLKYEYRKMESLKRHLYDDSEAVSASLAGMCGKYAELQSQYESLRQELSEEIKWIQDLMSSFQWEN
SIO_010081: DAPK2
subclass of: SO_0000673
so part of: DAPK2
location: complement(join(268848..269348,270254..270299,271758..271910,275968..275994,276676..276724,277875..278004,279393..279531,292379..292600,318375..318436))
location: region:268848-318436:-1
so has part: feature:318375-318436:-1:exon
so has part: feature:292379-292600:-1:exon
so has part: feature:279393-279531:-1:exon
so has part: feature:277875-278004:-1:exon
so has part: feature:276676-276724:-1:exon
so has part: feature:275968-275994:-1:exon
so has part: feature:271758-271910:-1:exon
so has part: feature:270254-270299:-1:exon
so has part: feature:268848-269348:-1:exon

XP_021403038.1
type: Protein
SIO_000068: ncbiprotein

position:268848:-1
position: 268848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318436:-1
position: 318436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318375-318436:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:292379-292600:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279393-279531:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:277875-278004:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:276676-276724:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:275968-275994:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:271758-271910:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:270254-270299:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:268848-269348:-1:exon

TBC1D2B
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TBC1D2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(329163..360604)
location: region:329163-360604:-1
so has part: feature:329163-360604:-1:exon
subclass of: SO_0000010

110479823
type: Gene
SIO_000068: ncbigene

position:329163:-1
position: 329163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360604:-1
position: 360604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329163-360604:-1:exon

TBC1D2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TBC1D2B
product: TBC1 domain family member 2B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021547345.2
SIO_010081: TBC1D2B
subclass of: SO_0000673
so part of: TBC1D2B
location: complement(join(329163..333100,335586..335707,336112..336243,336957..337074,338125..338619,339583..339776,340712..340822,342124..342516,343850..344076,345046..345203,348367..348532,353311..353464,360248..360604))
location: region:329163-360604:-1
so has part: feature:360248-360604:-1:exon
so has part: feature:353311-353464:-1:exon
so has part: feature:348367-348532:-1:exon
so has part: feature:345046-345203:-1:exon
so has part: feature:343850-344076:-1:exon
so has part: feature:342124-342516:-1:exon
so has part: feature:340712-340822:-1:exon
so has part: feature:339583-339776:-1:exon
so has part: feature:338125-338619:-1:exon
so has part: feature:336957-337074:-1:exon
so has part: feature:336112-336243:-1:exon
so has part: feature:335586-335707:-1:exon
so has part: feature:329163-333100:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:360248-360604:-1:exon

position:360248:-1
position: 360248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:353311-353464:-1:exon

position:353311:-1
position: 353311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353464:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:348367-348532:-1:exon

position:348367:-1
position: 348367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348532:-1
position: 348532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:345046-345203:-1:exon

position:345046:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345203:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 5
SIO_000628: feature:343850-344076:-1:exon

position:343850:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344076:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:342124-342516:-1:exon

position:342124:-1
position: 342124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342516:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:340712-340822:-1:exon

position:340712:-1
position: 340712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340822:-1
position: 340822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:339583-339776:-1:exon

position:339583:-1
position: 339583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339776:-1
position: 339776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:338125-338619:-1:exon

position:338125:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338619:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:336957-337074:-1:exon

position:336957:-1
position: 336957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337074:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:336112-336243:-1:exon

position:336112:-1
position: 336112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336243:-1
position: 336243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:335586-335707:-1:exon

position:335586:-1
position: 335586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335707:-1
position: 335707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:329163-333100:-1:exon

position:333100:-1
position: 333100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TBC1D2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TBC1D2B
product: TBC1 domain family member 2B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021547346.1
SIO_010081: TBC1D2B
subclass of: SO_0000673
so part of: TBC1D2B
location: complement(join(329163..333100,335586..335707,336058..336243,336957..337074,338125..338619,339583..339776,340712..340822,342124..342516,343850..343956,345046..345203,348367..348532,353311..353464,360248..360601))
location: region:329163-360601:-1
so has part: feature:360248-360601:-1:exon
so has part: feature:353311-353464:-1:exon
so has part: feature:348367-348532:-1:exon
so has part: feature:345046-345203:-1:exon
so has part: feature:343850-343956:-1:exon
so has part: feature:342124-342516:-1:exon
so has part: feature:340712-340822:-1:exon
so has part: feature:339583-339776:-1:exon
so has part: feature:338125-338619:-1:exon
so has part: feature:336957-337074:-1:exon
so has part: feature:336058-336243:-1:exon
so has part: feature:335586-335707:-1:exon
so has part: feature:329163-333100:-1:exon

position:360601:-1
position: 360601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360248-360601:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:353311-353464:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:348367-348532:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:345046-345203:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:343850-343956:-1:exon

position:343956:-1
position: 343956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:342124-342516:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:340712-340822:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:339583-339776:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:338125-338619:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:336957-337074:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:336058-336243:-1:exon

position:336058:-1
position: 336058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:335586-335707:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:329163-333100:-1:exon

TBC1D2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TBC1D2B
product: TBC1 domain family member 2B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021547344.2
SIO_010081: TBC1D2B
subclass of: SO_0000673
so part of: TBC1D2B
location: complement(join(329163..333100,335586..335707,336058..336243,336957..337074,338125..338619,339583..339776,340712..340822,342124..342516,343850..344025,345046..345203,348367..348532,353311..353464,360248..360601))
location: region:329163-360601:-1
so has part: feature:360248-360601:-1:exon
so has part: feature:353311-353464:-1:exon
so has part: feature:348367-348532:-1:exon
so has part: feature:345046-345203:-1:exon
so has part: feature:343850-344025:-1:exon
so has part: feature:342124-342516:-1:exon
so has part: feature:340712-340822:-1:exon
so has part: feature:339583-339776:-1:exon
so has part: feature:338125-338619:-1:exon
so has part: feature:336957-337074:-1:exon
so has part: feature:336058-336243:-1:exon
so has part: feature:335586-335707:-1:exon
so has part: feature:329163-333100:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:360248-360601:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:353311-353464:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:348367-348532:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:345046-345203:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:343850-344025:-1:exon

position:344025:-1
position: 344025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:342124-342516:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:340712-340822:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:339583-339776:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:338125-338619:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:336957-337074:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:336058-336243:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:335586-335707:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:329163-333100:-1:exon

TBC1D2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TBC1D2B
product: TBC1 domain family member 2B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_021547343.1
SIO_010081: TBC1D2B
subclass of: SO_0000673
so part of: TBC1D2B
location: complement(join(329163..333100,335586..335707,336058..336243,336957..337074,338125..338619,339583..339776,340712..340822,342124..342516,343850..344076,345046..345203,348367..348532,353311..353464,360248..360600))
location: region:329163-360600:-1
so has part: feature:360248-360600:-1:exon
so has part: feature:353311-353464:-1:exon
so has part: feature:348367-348532:-1:exon
so has part: feature:345046-345203:-1:exon
so has part: feature:343850-344076:-1:exon
so has part: feature:342124-342516:-1:exon
so has part: feature:340712-340822:-1:exon
so has part: feature:339583-339776:-1:exon
so has part: feature:338125-338619:-1:exon
so has part: feature:336957-337074:-1:exon
so has part: feature:336058-336243:-1:exon
so has part: feature:335586-335707:-1:exon
so has part: feature:329163-333100:-1:exon

position:360600:-1
position: 360600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360248-360600:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:353311-353464:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:348367-348532:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:345046-345203:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:343850-344076:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:342124-342516:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:340712-340822:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:339583-339776:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:338125-338619:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:336957-337074:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:336058-336243:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:335586-335707:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:329163-333100:-1:exon

TBC1D2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TBC1D2B
product: TBC1 domain family member 2B, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021547347.2
SIO_010081: TBC1D2B
subclass of: SO_0000673
so part of: TBC1D2B
location: complement(join(329163..333048,335586..335707,336058..336243,336957..337074,338125..338619,339583..339776,340712..340822,342124..342516,343850..344076,345046..345203,348367..348532,353311..353464,360248..360598))
location: region:329163-360598:-1
so has part: feature:360248-360598:-1:exon
so has part: feature:353311-353464:-1:exon
so has part: feature:348367-348532:-1:exon
so has part: feature:345046-345203:-1:exon
so has part: feature:343850-344076:-1:exon
so has part: feature:342124-342516:-1:exon
so has part: feature:340712-340822:-1:exon
so has part: feature:339583-339776:-1:exon
so has part: feature:338125-338619:-1:exon
so has part: feature:336957-337074:-1:exon
so has part: feature:336058-336243:-1:exon
so has part: feature:335586-335707:-1:exon
so has part: feature:329163-333048:-1:exon

position:360598:-1
position: 360598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360248-360598:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:353311-353464:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:348367-348532:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:345046-345203:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:343850-344076:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:342124-342516:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:340712-340822:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:339583-339776:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:338125-338619:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:336957-337074:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:336058-336243:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:335586-335707:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:329163-333048:-1:exon

position:333048:-1
position: 333048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TBC1D2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TBC1D2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TBC1 domain family member 2B isoform X4
translation: MPAAGSEGEEGLAGEQPGPGTPKLCGYLQKLSGKGPLRGFRSRWFVFDPRRCYLYYFKGPQEPVPLGHLDIASACFSYHQPEAGAGDEPAAFEVHSPGGAVTVLKAATRQDMTYWLQELQQRRWEYCNNLDVAKRDSRTSPTPSDFSKGLVAKDNSDFSILSQNASAERARNILAVETSPTDLVGEQAASQPAPVQASAINFSLKQWSTEIKNSMSSLRKGSNENRRSIFYTTEEWELLDPTPKDLEDSMALEEKRKHLAEGSKEWCSGSGSRLVSELQLKYQSQQEELEKLKKDLLSQKELVRLLQQTVRSSQYDKYFASHLCEGFPKDTLELLHQKDDQILGLNNQLEKLNLEKDSLQQEVKNLKCKVGELNERLGMLMETIQAKDEVIMKLSRQLSECEDGTSSQSGAINSPTSTCTNKELQELDRLKDNLQGYKTQNKFLNKEILELSTLRRNAEAREREWQAKYTSLEAKLCQIESKYLILLQEMKTPVCSEDQSPAREVITQLLEDALKAEPSEQPEQAFFKPHLVSEYDIYGFQTIPEDDDEEKLVAKSRALDLRSLSLSENREISTGVKWENYLASTMNREMMRCVELKNLIRSGIPHEHRSKIWKWCVNLHVKKFKDSAVPGYFQILLQKALEKPNPASKQIELDLLRTLPNNKHYSSPTSEGIQKLRNVLLAFSWRNPDIGYCQGLNRLVAIALLYLEQEDAFWCLVTIVEVFMPRDYYTKTLLGSQVDQRVFKDLLSEKLPRLHAHFEQYKVDYTLITFNWFLVVFVDSVVSDILFKIWDSFLYEGPKVIFRFALALFKYKEEEILKLQDSMSIFKYLRYFTRTILDARKLTAIAFGDLNPFPLRQIRNRRAYHLEKVRLELTELEAIREDFLRERETCVEKRDLISDDEEDS
SIO_010081: TBC1D2B
subclass of: SO_0000673
so part of: TBC1D2B
location: complement(join(332905..333100,335586..335707,336058..336243,336957..337074,338125..338619,339583..339776,340712..340822,342124..342516,343850..343956,345046..345203,348367..348532,353311..353464,360248..360562))
location: region:332905-360562:-1
so has part: feature:360248-360562:-1:exon
so has part: feature:353311-353464:-1:exon
so has part: feature:348367-348532:-1:exon
so has part: feature:345046-345203:-1:exon
so has part: feature:343850-343956:-1:exon
so has part: feature:342124-342516:-1:exon
so has part: feature:340712-340822:-1:exon
so has part: feature:339583-339776:-1:exon
so has part: feature:338125-338619:-1:exon
so has part: feature:336957-337074:-1:exon
so has part: feature:336058-336243:-1:exon
so has part: feature:335586-335707:-1:exon
so has part: feature:332905-333100:-1:exon

XP_021403021.1
type: Protein
SIO_000068: ncbiprotein

position:332905:-1
position: 332905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360562:-1
position: 360562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360248-360562:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:353311-353464:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:348367-348532:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:345046-345203:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:343850-343956:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:342124-342516:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:340712-340822:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:339583-339776:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:338125-338619:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:336957-337074:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:336058-336243:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:335586-335707:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:332905-333100:-1:exon

TBC1D2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TBC1D2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TBC1 domain family member 2B isoform X2
translation: MPAAGSEGEEGLAGEQPGPGTPKLCGYLQKLSGKGPLRGFRSRWFVFDPRRCYLYYFKGPQEPVPLGHLDIASACFSYHQPEAGAGDEPAAFEVHSPGGAVTVLKAATRQDMTYWLQELQQRRWEYCNNLDVAKRDSRTSPTPSDFSKGLVAKDNSDFSILSQNASAERARNILAVETSPTDLVGEQAASQPAPVQASAINFSLKQWSTEIKNSMSSLRKGSNENRRSIFYTTEEWELLDPTPKDLEDSMALEEKRKHLAEGSKARRPLKDMIGSSKNRNSSDSSPTEWCSGSGSRLVSELQLKYQSQQEELEKLKKDLLSQKELVRLLQQTVRSSQYDKYFASHLCEGFPKDTLELLHQKDDQILGLNNQLEKLNLEKDSLQQEVKNLKCKVGELNERLGMLMETIQAKDEVIMKLSRQLSECEDGTSSQSGAINSPTSTCTNKELQELDRLKDNLQGYKTQNKFLNKEILELSTLRRNAEAREREWQAKYTSLEAKLCQIESKYLILLQEMKTPVCSEDQSPAREVITQLLEDALKAEPSEQPEQAFFKPHLVSEYDIYGFQTIPEDDDEEKLVAKSRALDLRSLSLSENREISTGVKWENYLASTMNREMMRCVELKNLIRSGIPHEHRSKIWKWCVNLHVKKFKDSAVPGYFQILLQKALEKPNPASKQIELDLLRTLPNNKHYSSPTSEGIQKLRNVLLAFSWRNPDIGYCQGLNRLVAIALLYLEQEDAFWCLVTIVEVFMPRDYYTKTLLGSQVDQRVFKDLLSEKLPRLHAHFEQYKVDYTLITFNWFLVVFVDSVVSDILFKIWDSFLYEGPKVIFRFALALFKYKEEEILKLQDSMSIFKYLRYFTRTILDARKLTAIAFGDLNPFPLRQIRNRRAYHLEKVRLELTELEAIREDFLRERETCVEKRDLISDDEEDS
SIO_010081: TBC1D2B
subclass of: SO_0000673
so part of: TBC1D2B
location: complement(join(332905..333100,335586..335707,336058..336243,336957..337074,338125..338619,339583..339776,340712..340822,342124..342516,343850..344025,345046..345203,348367..348532,353311..353464,360248..360562))
location: region:332905-360562:-1
so has part: feature:360248-360562:-1:exon
so has part: feature:353311-353464:-1:exon
so has part: feature:348367-348532:-1:exon
so has part: feature:345046-345203:-1:exon
so has part: feature:343850-344025:-1:exon
so has part: feature:342124-342516:-1:exon
so has part: feature:340712-340822:-1:exon
so has part: feature:339583-339776:-1:exon
so has part: feature:338125-338619:-1:exon
so has part: feature:336957-337074:-1:exon
so has part: feature:336058-336243:-1:exon
so has part: feature:335586-335707:-1:exon
so has part: feature:332905-333100:-1:exon

XP_021403019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:360248-360562:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:353311-353464:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:348367-348532:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:345046-345203:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:343850-344025:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:342124-342516:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:340712-340822:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:339583-339776:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:338125-338619:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:336957-337074:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:336058-336243:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:335586-335707:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:332905-333100:-1:exon

TBC1D2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TBC1D2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TBC1 domain family member 2B isoform X3
translation: MPAAGSEGEEGLAGEQPGPGTPKLCGYLQKLSGKGPLRGFRSRWFVFDPRRCYLYYFKGPQEPVPLGHLDIASACFSYHQPEAGAGDEPAAFEVHSPGGAVTVLKAATRQDMTYWLQELQQRRWEYCNNLDVAKRDSRTSPTPSDFSKGLVAKDNSDFSILSQNASAERARNILAVETSPTDLVGEQAASQPAPVQASAINFSLKQWSTEIKNSMSSLRKGSNENRRSIFYTTEEWELLDPTPKDLEDSMALEEKRKHLAEGSKGLTSSAFPFDFGRIPYKARRPLKDMIGSSKNRNSSDSSPTEWCSGSGSRLVSELQLKYQSQQEELEKLKKDLLSQKELVRLLQQTVRSSQYDKYFASHLCEGFPKDTLELLHQKDDQILGLNNQLEKLNLEKDSLQQEVKNLKCKVGELNERLGMLMETIQAKDEVIMKLSRQLSECEDGTSSQSGAINSPTSTCTNKELQELDRLKDNLQGYKTQNKFLNKEILELSTLRRNAEAREREWQAKYTSLEAKLCQIESKYLILLQEMKTPVCSEDQSPAREVITQLLEDALKAEPSEQPEQAFFKPHLVSEYDIYGFQTIPEDDDEEKLVAKSRALDLRSLSLSENREISTGVKWENYLASTMNREMMRCVELKNLIRSGIPHEHRSKIWKWCVNLHVKKFKDSAVPGYFQILLQKALEKPNPASKQIELDLLRTLPNNKHYSSPTSEGIQKLRNVLLAFSWRNPDIGYCQGLNRLVAIALLYLEQEDAFWCLVTIVEVFMPRDYYTKTLLGSQVDQRVFKDLLSEKLPRLHAHFEQYKVDYTLITFNWFLVVFVDSVVIFRFALALFKYKEEEILKLQDSMSIFKYLRYFTRTILDARKLTAIAFGDLNPFPLRQIRNRRAYHLEKVRLELTELEAIREDFLRERETCVEKRDLISDDEEDS
SIO_010081: TBC1D2B
subclass of: SO_0000673
so part of: TBC1D2B
location: complement(join(332905..333100,335586..335707,336112..336243,336957..337074,338125..338619,339583..339776,340712..340822,342124..342516,343850..344076,345046..345203,348367..348532,353311..353464,360248..360562))
location: region:332905-360562:-1
so has part: feature:360248-360562:-1:exon
so has part: feature:353311-353464:-1:exon
so has part: feature:348367-348532:-1:exon
so has part: feature:345046-345203:-1:exon
so has part: feature:343850-344076:-1:exon
so has part: feature:342124-342516:-1:exon
so has part: feature:340712-340822:-1:exon
so has part: feature:339583-339776:-1:exon
so has part: feature:338125-338619:-1:exon
so has part: feature:336957-337074:-1:exon
so has part: feature:336112-336243:-1:exon
so has part: feature:335586-335707:-1:exon
so has part: feature:332905-333100:-1:exon

XP_021403020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:360248-360562:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:353311-353464:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:348367-348532:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:345046-345203:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:343850-344076:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:342124-342516:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:340712-340822:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:339583-339776:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:338125-338619:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:336957-337074:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:336112-336243:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:335586-335707:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:332905-333100:-1:exon

TBC1D2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TBC1D2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TBC1 domain family member 2B isoform X1
translation: MPAAGSEGEEGLAGEQPGPGTPKLCGYLQKLSGKGPLRGFRSRWFVFDPRRCYLYYFKGPQEPVPLGHLDIASACFSYHQPEAGAGDEPAAFEVHSPGGAVTVLKAATRQDMTYWLQELQQRRWEYCNNLDVAKRDSRTSPTPSDFSKGLVAKDNSDFSILSQNASAERARNILAVETSPTDLVGEQAASQPAPVQASAINFSLKQWSTEIKNSMSSLRKGSNENRRSIFYTTEEWELLDPTPKDLEDSMALEEKRKHLAEGSKGLTSSAFPFDFGRIPYKARRPLKDMIGSSKNRNSSDSSPTEWCSGSGSRLVSELQLKYQSQQEELEKLKKDLLSQKELVRLLQQTVRSSQYDKYFASHLCEGFPKDTLELLHQKDDQILGLNNQLEKLNLEKDSLQQEVKNLKCKVGELNERLGMLMETIQAKDEVIMKLSRQLSECEDGTSSQSGAINSPTSTCTNKELQELDRLKDNLQGYKTQNKFLNKEILELSTLRRNAEAREREWQAKYTSLEAKLCQIESKYLILLQEMKTPVCSEDQSPAREVITQLLEDALKAEPSEQPEQAFFKPHLVSEYDIYGFQTIPEDDDEEKLVAKSRALDLRSLSLSENREISTGVKWENYLASTMNREMMRCVELKNLIRSGIPHEHRSKIWKWCVNLHVKKFKDSAVPGYFQILLQKALEKPNPASKQIELDLLRTLPNNKHYSSPTSEGIQKLRNVLLAFSWRNPDIGYCQGLNRLVAIALLYLEQEDAFWCLVTIVEVFMPRDYYTKTLLGSQVDQRVFKDLLSEKLPRLHAHFEQYKVDYTLITFNWFLVVFVDSVVSDILFKIWDSFLYEGPKVIFRFALALFKYKEEEILKLQDSMSIFKYLRYFTRTILDARKLTAIAFGDLNPFPLRQIRNRRAYHLEKVRLELTELEAIREDFLRERETCVEKRDLISDDEEDS
SIO_010081: TBC1D2B
subclass of: SO_0000673
so part of: TBC1D2B
location: complement(join(332905..333100,335586..335707,336058..336243,336957..337074,338125..338619,339583..339776,340712..340822,342124..342516,343850..344076,345046..345203,348367..348532,353311..353464,360248..360562))
location: region:332905-360562:-1
so has part: feature:360248-360562:-1:exon
so has part: feature:353311-353464:-1:exon
so has part: feature:348367-348532:-1:exon
so has part: feature:345046-345203:-1:exon
so has part: feature:343850-344076:-1:exon
so has part: feature:342124-342516:-1:exon
so has part: feature:340712-340822:-1:exon
so has part: feature:339583-339776:-1:exon
so has part: feature:338125-338619:-1:exon
so has part: feature:336957-337074:-1:exon
so has part: feature:336058-336243:-1:exon
so has part: feature:335586-335707:-1:exon
so has part: feature:332905-333100:-1:exon

XP_021403018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:360248-360562:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:353311-353464:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:348367-348532:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:345046-345203:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:343850-344076:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:342124-342516:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:340712-340822:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:339583-339776:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:338125-338619:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:336957-337074:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:336058-336243:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:335586-335707:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:332905-333100:-1:exon

TBC1D2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TBC1D2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TBC1 domain family member 2B isoform X5
translation: MPAAGSEGEEGLAGEQPGPGTPKLCGYLQKLSGKGPLRGFRSRWFVFDPRRCYLYYFKGPQEPVPLGHLDIASACFSYHQPEAGAGDEPAAFEVHSPGGAVTVLKAATRQDMTYWLQELQQRRWEYCNNLDVAKRDSRTSPTPSDFSKGLVAKDNSDFSILSQNASAERARNILAVETSPTDLVGEQAASQPAPVQASAINFSLKQWSTEIKNSMSSLRKGSNENRRSIFYTTEEWELLDPTPKDLEDSMALEEKRKHLAEGSKGLTSSAFPFDFGRIPYKARRPLKDMIGSSKNRNSSDSSPTEWCSGSGSRLVSELQLKYQSQQEELEKLKKDLLSQKELVRLLQQTVRSSQYDKYFASHLCEGFPKDTLELLHQKDDQILGLNNQLEKLNLEKDSLQQEVKNLKCKVGELNERLGMLMETIQAKDEVIMKLSRQLSECEDGTSSQSGAINSPTSTCTNKELQELDRLKDNLQGYKTQNKFLNKEILELSTLRRNAEAREREWQAKYTSLEAKLCQIESKYLILLQEMKTPVCSEDQSPAREVITQLLEDALKAEPSEQPEQAFFKPHLVSEYDIYGFQTIPEDDDEEKLVAKSRALDLRSLSLSENREISTGVKWENYLASTMNREMMRCVELKNLIRSGIPHEHRSKIWKWCVNLHVKKFKDSAVPGYFQILLQKALEKPNPASKQIELDLLRTLPNNKHYSSPTSEGIQKLRNVLLAFSWRNPDIGYCQGLNRLVAIALLYLEQEDAFWCLVTIVEVFMPRDYYTKTLLGSQVDQRVFKDLLSEKLPRLHAHFEQYKVDYTLITFNWFLVVFVDSVVSDILFKIWDSFLYEGPKVIFRFALALFKYKEEEILKLQDSMSIFKYLRYFTRTILDARSETAGPITWRKCAWS
SIO_010081: TBC1D2B
subclass of: SO_0000673
so part of: TBC1D2B
location: complement(join(333000..333048,335586..335707,336058..336243,336957..337074,338125..338619,339583..339776,340712..340822,342124..342516,343850..344076,345046..345203,348367..348532,353311..353464,360248..360562))
location: region:333000-360562:-1
so has part: feature:360248-360562:-1:exon
so has part: feature:353311-353464:-1:exon
so has part: feature:348367-348532:-1:exon
so has part: feature:345046-345203:-1:exon
so has part: feature:343850-344076:-1:exon
so has part: feature:342124-342516:-1:exon
so has part: feature:340712-340822:-1:exon
so has part: feature:339583-339776:-1:exon
so has part: feature:338125-338619:-1:exon
so has part: feature:336957-337074:-1:exon
so has part: feature:336058-336243:-1:exon
so has part: feature:335586-335707:-1:exon
so has part: feature:333000-333048:-1:exon

XP_021403022.1
type: Protein
SIO_000068: ncbiprotein

position:333000:-1
position: 333000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360248-360562:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:353311-353464:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:348367-348532:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:345046-345203:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:343850-344076:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:342124-342516:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:340712-340822:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:339583-339776:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:338125-338619:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:336957-337074:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:336058-336243:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:335586-335707:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:333000-333048:-1:exon

CIB2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: CIB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(379803..402557)
location: region:379803-402557:-1
so has part: feature:379803-402557:-1:exon
subclass of: SO_0000010

110479831
type: Gene
SIO_000068: ncbigene

position:379803:-1
position: 379803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402557:-1
position: 402557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379803-402557:-1:exon

CIB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: CIB2
product: calcium and integrin binding family member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031505761.1
SIO_010081: CIB2
subclass of: SO_0000673
so part of: CIB2
location: complement(join(379803..380765,394405..394600,394689..394836,402409..402557))
location: region:379803-402557:-1
so has part: feature:402409-402557:-1:exon
so has part: feature:394689-394836:-1:exon
so has part: feature:394405-394600:-1:exon
so has part: feature:379803-380765:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:402409-402557:-1:exon

position:402409:-1
position: 402409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:394689-394836:-1:exon

position:394689:-1
position: 394689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394836:-1
position: 394836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:394405-394600:-1:exon

position:394405:-1
position: 394405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394600:-1
position: 394600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:379803-380765:-1:exon

position:380765:-1
position: 380765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CIB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: CIB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium and integrin-binding family member 2
translation: MAPNVVPMDYTKDPDVKLPMQLIINMPELKENPFKERIVESFSEDGEGSLSFNDFVDMFSVLSEMAPRELKAIYAFKIYDFNTDNFICKADLEKTLNKLTREELTAEEITLVCEKVIEEADMDGDGKLGFADFENMISKAPDFLSTFHIRI
SIO_010081: CIB2
subclass of: SO_0000673
so part of: CIB2
location: complement(join(380744..380765,394405..394600,394689..394836,402409..402498))
location: region:380744-402498:-1
so has part: feature:402409-402498:-1:exon
so has part: feature:394689-394836:-1:exon
so has part: feature:394405-394600:-1:exon
so has part: feature:380744-380765:-1:exon

XP_031361621.1
type: Protein
SIO_000068: ncbiprotein

position:380744:-1
position: 380744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402498:-1
position: 402498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402409-402498:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:394689-394836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:394405-394600:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:380744-380765:-1:exon

IDH3A
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: IDH3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 427976..440193
location: region:427976-440193:1
so has part: feature:427976-440193:1:exon
subclass of: SO_0000010

110479827
type: Gene
SIO_000068: ncbigene

position:427976:1
position: 427976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440193:1
position: 440193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427976-440193:1:exon

IDH3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: IDH3A
product: isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 26 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_021547361.1
SIO_010081: IDH3A
subclass of: SO_0000673
so part of: IDH3A
location: join(427976..428108,430189..430251,431942..432025,433192..433306,433847..434034,434244..434377,434966..435068,435173..435237,437341..437425,437916..438068,439950..440193)
location: region:427976-440193:1
so has part: feature:427976-428108:1:exon
so has part: feature:430189-430251:1:exon
so has part: feature:431942-432025:1:exon
so has part: feature:433192-433306:1:exon
so has part: feature:433847-434034:1:exon
so has part: feature:434244-434377:1:exon
so has part: feature:434966-435068:1:exon
so has part: feature:435173-435237:1:exon
so has part: feature:437341-437425:1:exon
so has part: feature:437916-438068:1:exon
so has part: feature:439950-440193:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:427976-428108:1:exon

position:428108:1
position: 428108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:430189-430251:1:exon

position:430189:1
position: 430189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430251:1
position: 430251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:431942-432025:1:exon

position:431942:1
position: 431942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432025:1
position: 432025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:433192-433306:1:exon

position:433192:1
position: 433192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433306:1
position: 433306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:433847-434034:1:exon

position:433847:1
position: 433847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434034:1
position: 434034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:434244-434377:1:exon

position:434244:1
position: 434244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434377:1
position: 434377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:434966-435068:1:exon

position:434966:1
position: 434966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435068:1
position: 435068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:435173-435237:1:exon

position:435173:1
position: 435173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435237:1
position: 435237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:437341-437425:1:exon

position:437341:1
position: 437341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437425:1
position: 437425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:437916-438068:1:exon

position:437916:1
position: 437916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438068:1
position: 438068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:439950-440193:1:exon

position:439950:1
position: 439950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IDH3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: IDH3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial
translation: MAATVWMPTVSRLLGAFKSQKKVTRSFGNAVQTVTLIPGDGIGPEISAAVMKIFDAAKAPIQWEERNVTAIQGPGGKWMIPPEAKESMDKNKMGLKGPLKTPIAAGHPSMNLLLRKTFDLYANVRPCVSIEGYKTPYTDVNIVTIRENTEGEYSGIEHVIVDGVVQSIKLITEEASKRIAEFAFEYARNNQRSHVTAVHKANIMRMSDGLFLRKCREAAENCKDIKFNEMYLDTVCLNMVQDPSQFDVLVMPNLYGDILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMGMHKYATKIESACFDTIKDGKILTKDLGGNAKCSEFTEEICRRVRDKD
SIO_010081: IDH3A
subclass of: SO_0000673
so part of: IDH3A
location: join(428082..428108,430189..430251,431942..432025,433192..433306,433847..434034,434244..434377,434966..435068,435173..435237,437341..437425,437916..438068,439950..440033)
location: region:428082-440033:1
so has part: feature:428082-428108:1:exon
so has part: feature:430189-430251:1:exon
so has part: feature:431942-432025:1:exon
so has part: feature:433192-433306:1:exon
so has part: feature:433847-434034:1:exon
so has part: feature:434244-434377:1:exon
so has part: feature:434966-435068:1:exon
so has part: feature:435173-435237:1:exon
so has part: feature:437341-437425:1:exon
so has part: feature:437916-438068:1:exon
so has part: feature:439950-440033:1:exon

XP_021403036.1
type: Protein
SIO_000068: ncbiprotein

position:428082:1
position: 428082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440033:1
position: 440033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428082-428108:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:430189-430251:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:431942-432025:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:433192-433306:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:433847-434034:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:434244-434377:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:434966-435068:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:435173-435237:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:437341-437425:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:437916-438068:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:439950-440033:1:exon

ACSBG1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: ACSBG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(441413..482416)
location: region:441413-482416:-1
so has part: feature:441413-482416:-1:exon
subclass of: SO_0000010

110479825
type: Gene
SIO_000068: ncbigene

position:441413:-1
position: 441413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482416:-1
position: 482416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441413-482416:-1:exon

ACSBG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ACSBG1
product: acyl-CoA synthetase bubblegum family member 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021547351.2
SIO_010081: ACSBG1
subclass of: SO_0000673
so part of: ACSBG1
location: complement(join(441413..442764,443772..444018,445008..445147,446884..447101,447655..447888,448482..448663,449003..449179,455995..456115,456895..456983,458147..458364,466785..466867,475519..476046))
location: region:441413-476046:-1
so has part: feature:475519-476046:-1:exon
so has part: feature:466785-466867:-1:exon
so has part: feature:458147-458364:-1:exon
so has part: feature:456895-456983:-1:exon
so has part: feature:455995-456115:-1:exon
so has part: feature:449003-449179:-1:exon
so has part: feature:448482-448663:-1:exon
so has part: feature:447655-447888:-1:exon
so has part: feature:446884-447101:-1:exon
so has part: feature:445008-445147:-1:exon
so has part: feature:443772-444018:-1:exon
so has part: feature:441413-442764:-1:exon

position:476046:-1
position: 476046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475519-476046:-1:exon

position:475519:-1
position: 475519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:466785-466867:-1:exon

position:466785:-1
position: 466785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466867:-1
position: 466867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:458147-458364:-1:exon

position:458147:-1
position: 458147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458364:-1
position: 458364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:456895-456983:-1:exon

position:456895:-1
position: 456895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456983:-1
position: 456983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:455995-456115:-1:exon

position:455995:-1
position: 455995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456115:-1
position: 456115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:449003-449179:-1:exon

position:449003:-1
position: 449003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449179:-1
position: 449179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:448482-448663:-1:exon

position:448482:-1
position: 448482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448663:-1
position: 448663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:447655-447888:-1:exon

position:447655:-1
position: 447655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447888:-1
position: 447888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:446884-447101:-1:exon

position:446884:-1
position: 446884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447101:-1
position: 447101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:445008-445147:-1:exon

position:445008:-1
position: 445008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445147:-1
position: 445147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:443772-444018:-1:exon

position:443772:-1
position: 443772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444018:-1
position: 444018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:441413-442764:-1:exon

position:442764:-1
position: 442764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ACSBG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ACSBG1
product: acyl-CoA synthetase bubblegum family member 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021547350.2
SIO_010081: ACSBG1
subclass of: SO_0000673
so part of: ACSBG1
location: complement(join(441413..442764,443772..444018,445008..445147,446884..447101,447655..447888,448482..448663,449003..449179,454117..454197,455995..456115,456895..456983,458147..458364,466785..466867,475519..476046))
location: region:441413-476046:-1
so has part: feature:475519-476046:-1:exon
so has part: feature:466785-466867:-1:exon
so has part: feature:458147-458364:-1:exon
so has part: feature:456895-456983:-1:exon
so has part: feature:455995-456115:-1:exon
so has part: feature:454117-454197:-1:exon
so has part: feature:449003-449179:-1:exon
so has part: feature:448482-448663:-1:exon
so has part: feature:447655-447888:-1:exon
so has part: feature:446884-447101:-1:exon
so has part: feature:445008-445147:-1:exon
so has part: feature:443772-444018:-1:exon
so has part: feature:441413-442764:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:475519-476046:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:466785-466867:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:458147-458364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:456895-456983:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:455995-456115:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:454117-454197:-1:exon

position:454117:-1
position: 454117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:454197:-1
position: 454197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:449003-449179:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448482-448663:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447655-447888:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:446884-447101:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:445008-445147:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:443772-444018:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:441413-442764:-1:exon

ACSBG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ACSBG1
product: acyl-CoA synthetase bubblegum family member 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021547352.2
SIO_010081: ACSBG1
subclass of: SO_0000673
so part of: ACSBG1
location: complement(join(441413..442764,443772..444018,445008..445147,446884..447101,448482..448663,449003..449179,451522..451671,454117..454197,455995..456115,456895..456983,458147..458364,466785..466867,475519..476046))
location: region:441413-476046:-1
so has part: feature:475519-476046:-1:exon
so has part: feature:466785-466867:-1:exon
so has part: feature:458147-458364:-1:exon
so has part: feature:456895-456983:-1:exon
so has part: feature:455995-456115:-1:exon
so has part: feature:454117-454197:-1:exon
so has part: feature:451522-451671:-1:exon
so has part: feature:449003-449179:-1:exon
so has part: feature:448482-448663:-1:exon
so has part: feature:446884-447101:-1:exon
so has part: feature:445008-445147:-1:exon
so has part: feature:443772-444018:-1:exon
so has part: feature:441413-442764:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:475519-476046:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:466785-466867:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:458147-458364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:456895-456983:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:455995-456115:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:454117-454197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:451522-451671:-1:exon

position:451522:-1
position: 451522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451671:-1
position: 451671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:449003-449179:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:448482-448663:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:446884-447101:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:445008-445147:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:443772-444018:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:441413-442764:-1:exon

ACSBG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ACSBG1
product: acyl-CoA synthetase bubblegum family member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021547348.2
SIO_010081: ACSBG1
subclass of: SO_0000673
so part of: ACSBG1
location: complement(join(441413..442764,443772..444018,445008..445147,446884..447101,447655..447888,448482..448663,449003..449179,451522..451671,454117..454197,455995..456115,456895..456983,458147..458364,466785..466867,475519..476045))
location: region:441413-476045:-1
so has part: feature:475519-476045:-1:exon
so has part: feature:466785-466867:-1:exon
so has part: feature:458147-458364:-1:exon
so has part: feature:456895-456983:-1:exon
so has part: feature:455995-456115:-1:exon
so has part: feature:454117-454197:-1:exon
so has part: feature:451522-451671:-1:exon
so has part: feature:449003-449179:-1:exon
so has part: feature:448482-448663:-1:exon
so has part: feature:447655-447888:-1:exon
so has part: feature:446884-447101:-1:exon
so has part: feature:445008-445147:-1:exon
so has part: feature:443772-444018:-1:exon
so has part: feature:441413-442764:-1:exon

position:476045:-1
position: 476045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475519-476045:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:466785-466867:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:458147-458364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:456895-456983:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:455995-456115:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:454117-454197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:451522-451671:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:449003-449179:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:448482-448663:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:447655-447888:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:446884-447101:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:445008-445147:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:443772-444018:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:441413-442764:-1:exon

ACSBG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ACSBG1
product: acyl-CoA synthetase bubblegum family member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021547349.2
SIO_010081: ACSBG1
subclass of: SO_0000673
so part of: ACSBG1
location: complement(join(441413..442764,443772..444018,445008..445147,446884..447101,447655..447885,448482..448663,449003..449179,451522..451671,454117..454197,455995..456115,456895..456983,458147..458364,466785..466867,475519..476044))
location: region:441413-476044:-1
so has part: feature:475519-476044:-1:exon
so has part: feature:466785-466867:-1:exon
so has part: feature:458147-458364:-1:exon
so has part: feature:456895-456983:-1:exon
so has part: feature:455995-456115:-1:exon
so has part: feature:454117-454197:-1:exon
so has part: feature:451522-451671:-1:exon
so has part: feature:449003-449179:-1:exon
so has part: feature:448482-448663:-1:exon
so has part: feature:447655-447885:-1:exon
so has part: feature:446884-447101:-1:exon
so has part: feature:445008-445147:-1:exon
so has part: feature:443772-444018:-1:exon
so has part: feature:441413-442764:-1:exon

position:476044:-1
position: 476044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475519-476044:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:466785-466867:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:458147-458364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:456895-456983:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:455995-456115:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:454117-454197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:451522-451671:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:449003-449179:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:448482-448663:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:447655-447885:-1:exon

position:447885:-1
position: 447885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:446884-447101:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:445008-445147:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:443772-444018:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:441413-442764:-1:exon

ACSBG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ACSBG1
product: acyl-CoA synthetase bubblegum family member 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021547356.2
SIO_010081: ACSBG1
subclass of: SO_0000673
so part of: ACSBG1
location: complement(join(441413..442764,443772..444018,445008..445147,446884..447101,447655..447888,448482..448663,449003..449179,451522..451671,454117..454197,455995..456115,456895..456983,457301..457697))
location: region:441413-457697:-1
so has part: feature:457301-457697:-1:exon
so has part: feature:456895-456983:-1:exon
so has part: feature:455995-456115:-1:exon
so has part: feature:454117-454197:-1:exon
so has part: feature:451522-451671:-1:exon
so has part: feature:449003-449179:-1:exon
so has part: feature:448482-448663:-1:exon
so has part: feature:447655-447888:-1:exon
so has part: feature:446884-447101:-1:exon
so has part: feature:445008-445147:-1:exon
so has part: feature:443772-444018:-1:exon
so has part: feature:441413-442764:-1:exon

position:457697:-1
position: 457697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457301-457697:-1:exon

position:457301:-1
position: 457301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:456895-456983:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:455995-456115:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:454117-454197:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:451522-451671:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449003-449179:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448482-448663:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:447655-447888:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:446884-447101:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445008-445147:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443772-444018:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:441413-442764:-1:exon

ACSBG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ACSBG1
product: acyl-CoA synthetase bubblegum family member 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021547353.2
SIO_010081: ACSBG1
subclass of: SO_0000673
so part of: ACSBG1
location: complement(join(442646..442764,443772..444018,445008..445147,446884..447101,447655..447888,448482..448663,449003..449179,451522..451671,454117..454197,455995..456115,456895..456983,458147..458364,466785..466867,482211..482416))
location: region:442646-482416:-1
so has part: feature:482211-482416:-1:exon
so has part: feature:466785-466867:-1:exon
so has part: feature:458147-458364:-1:exon
so has part: feature:456895-456983:-1:exon
so has part: feature:455995-456115:-1:exon
so has part: feature:454117-454197:-1:exon
so has part: feature:451522-451671:-1:exon
so has part: feature:449003-449179:-1:exon
so has part: feature:448482-448663:-1:exon
so has part: feature:447655-447888:-1:exon
so has part: feature:446884-447101:-1:exon
so has part: feature:445008-445147:-1:exon
so has part: feature:443772-444018:-1:exon
so has part: feature:442646-442764:-1:exon

position:442646:-1
position: 442646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482211-482416:-1:exon

position:482211:-1
position: 482211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:466785-466867:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:458147-458364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:456895-456983:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:455995-456115:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:454117-454197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:451522-451671:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:449003-449179:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:448482-448663:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:447655-447888:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:446884-447101:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:445008-445147:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:443772-444018:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:442646-442764:-1:exon

ACSBG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ACSBG1
product: acyl-CoA synthetase bubblegum family member 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021547355.1
SIO_010081: ACSBG1
subclass of: SO_0000673
so part of: ACSBG1
location: complement(join(442646..442764,443772..444018,445008..445147,446884..447101,447655..447888,448482..448663,449003..449179,451522..451671,454117..454197,455995..456115,456895..456983,458147..458364,465579..465806))
location: region:442646-465806:-1
so has part: feature:465579-465806:-1:exon
so has part: feature:458147-458364:-1:exon
so has part: feature:456895-456983:-1:exon
so has part: feature:455995-456115:-1:exon
so has part: feature:454117-454197:-1:exon
so has part: feature:451522-451671:-1:exon
so has part: feature:449003-449179:-1:exon
so has part: feature:448482-448663:-1:exon
so has part: feature:447655-447888:-1:exon
so has part: feature:446884-447101:-1:exon
so has part: feature:445008-445147:-1:exon
so has part: feature:443772-444018:-1:exon
so has part: feature:442646-442764:-1:exon

position:465806:-1
position: 465806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465579-465806:-1:exon

position:465579:-1
position: 465579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:458147-458364:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:456895-456983:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:455995-456115:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:454117-454197:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:451522-451671:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:449003-449179:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448482-448663:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447655-447888:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:446884-447101:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:445008-445147:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:443772-444018:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:442646-442764:-1:exon

ACSBG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ACSBG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: long-chain-fatty-acid--CoA ligase ACSBG1 isoform X4
translation: MPNSGKTLTKQLQTENARNVSGSCENGAFTDAQTVGRNLLPHLEETRGEGIEPADSLWTSFADGRVRLRIDNSCPQTPITVHQMFKESLEKYGSLNALASKKNGKWEKITFSEYYCLSRKAAKSFLKLGLERFHSVAILGFNSPEWFISAVGAIFAGGIVTGIYATNSPEACHYIAHDSKTDIMVVENQKQLDKIMQITWTSAHCSRAGGMQPAEVQQESIVSYLPLSHIAAQIYDLWTGIKWGEQVYFAEPDALKGSLINTLKEVQPTSHMGVPRVWEKIMEKLKDASAQSGFMKKKMLSWAMSLSLEKNLHGSNSSDLKQLWTRLADYLVLAKIRSALGLSSCQKHFSGAAPLSTETLCFFLGLNITLYEAYGMSETTGPHCLSGPYIYRQHSCGKPVPGCRVKLVDKDTEGNGEICFWGRTVFMGYLNMEDRTKESFDEEGWLHSGDLGKLDNDGFLYVTGRIKDLIITAGGENVPPIPIEDAVKKELPIVSNAMVIGDKKKFLSMFLTLKSVLDPDTSDPTDILTEQARDFCQRSGSKATKVSDIVATRDQATYRAIQEGIDRVNSTATNRVHCIQKWIVLPRDFSISGGELGPTMKLKRLAVLEKYRNEVDSFYKE
SIO_010081: ACSBG1
subclass of: SO_0000673
so part of: ACSBG1
location: complement(join(442688..442764,443772..444018,445008..445147,446884..447101,447655..447888,448482..448663,449003..449179,455995..456115,456895..456983,458147..458364,466785..466867,475519..475598))
location: region:442688-475598:-1
so has part: feature:475519-475598:-1:exon
so has part: feature:466785-466867:-1:exon
so has part: feature:458147-458364:-1:exon
so has part: feature:456895-456983:-1:exon
so has part: feature:455995-456115:-1:exon
so has part: feature:449003-449179:-1:exon
so has part: feature:448482-448663:-1:exon
so has part: feature:447655-447888:-1:exon
so has part: feature:446884-447101:-1:exon
so has part: feature:445008-445147:-1:exon
so has part: feature:443772-444018:-1:exon
so has part: feature:442688-442764:-1:exon

XP_021403026.1
type: Protein
SIO_000068: ncbiprotein

position:442688:-1
position: 442688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475598:-1
position: 475598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475519-475598:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:466785-466867:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:458147-458364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:456895-456983:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:455995-456115:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449003-449179:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448482-448663:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:447655-447888:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:446884-447101:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445008-445147:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443772-444018:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:442688-442764:-1:exon

ACSBG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ACSBG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: long-chain-fatty-acid--CoA ligase ACSBG1 isoform X3
translation: MPNSGKTLTKQLQTENARNVSGSCENGAFTDAQTVGRNLLPHLEETRGEGIEPADSLWTSFADGRVRLRIDNSCPQTPITVHQMFKESLEKYGSLNALASKKNGKWEKITFSEYYCLSRKAAKSFLKLGLERFHSVAILGFNSPEWFISAVGAIFAGGIVTGIYATNSPEACHYIAHDSKTDIMVVENQKQLDKIMQIWNRLPHLKAVVLYKDSIAERHPNLYMITWTSAHCSRAGGMQPAEVQQESIVSYLPLSHIAAQIYDLWTGIKWGEQVYFAEPDALKGSLINTLKEVQPTSHMGVPRVWEKIMEKLKDASAQSGFMKKKMLSWAMSLSLEKNLHGSNSSDLKQLWTRLADYLVLAKIRSALGLSSCQKHFSGAAPLSTETLCFFLGLNITLYEAYGMSETTGPHCLSGPYIYRQHSCGKPVPGCRVKLVDKDTEGNGEICFWGRTVFMGYLNMEDRTKESFDEEGWLHSGDLGKLDNDGFLYVTGRIKDLIITAGGENVPPIPIEDAVKKELPIVSNAMVIGDKKKFLSMFLTLKSVLDPDTSDPTDILTEQARDFCQRSGSKATKVSDIVATRDQATYRAIQEGIDRVNSTATNRVHCIQKWIVLPRDFSISGGELGPTMKLKRLAVLEKYRNEVDSFYKE
SIO_010081: ACSBG1
subclass of: SO_0000673
so part of: ACSBG1
location: complement(join(442688..442764,443772..444018,445008..445147,446884..447101,447655..447888,448482..448663,449003..449179,454117..454197,455995..456115,456895..456983,458147..458364,466785..466867,475519..475598))
location: region:442688-475598:-1
so has part: feature:475519-475598:-1:exon
so has part: feature:466785-466867:-1:exon
so has part: feature:458147-458364:-1:exon
so has part: feature:456895-456983:-1:exon
so has part: feature:455995-456115:-1:exon
so has part: feature:454117-454197:-1:exon
so has part: feature:449003-449179:-1:exon
so has part: feature:448482-448663:-1:exon
so has part: feature:447655-447888:-1:exon
so has part: feature:446884-447101:-1:exon
so has part: feature:445008-445147:-1:exon
so has part: feature:443772-444018:-1:exon
so has part: feature:442688-442764:-1:exon

XP_021403025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:475519-475598:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:466785-466867:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:458147-458364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:456895-456983:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:455995-456115:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:454117-454197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:449003-449179:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448482-448663:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447655-447888:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:446884-447101:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:445008-445147:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:443772-444018:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:442688-442764:-1:exon

ACSBG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ACSBG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: long-chain-fatty-acid--CoA ligase ACSBG1 isoform X5
translation: MPNSGKTLTKQLQTENARNVSGSCENGAFTDAQTVGRNLLPHLEETRGEGIEPADSLWTSFADGRVRLRIDNSCPQTPITVHQMFKESLEKYGSLNALASKKNGKWEKITFSEYYCLSRKAAKSFLKLGLERFHSVAILGFNSPEWFISAVGAIFAGGIVTGIYATNSPEACHYIAHDSKTDIMVVENQKQLDKIMQIWNRLPHLKAVVLYKDSIAERHPNLYMMEEFLELGDDISDSTLDDIINSQKPNQCCVLIYTSGTTGKPKGAMLSHDNITWTSAHCSRAGGMQPAEVQQESIVSYLPLSHIAAQIYDLWTGIKWGEQVYFAEPDALKGSLINTLKEVQPTSHMGVPRVWEKIMEKLKDASAQSGFMKKKMLSWAMSLSLEKNLHGSNSCGKPVPGCRVKLVDKDTEGNGEICFWGRTVFMGYLNMEDRTKESFDEEGWLHSGDLGKLDNDGFLYVTGRIKDLIITAGGENVPPIPIEDAVKKELPIVSNAMVIGDKKKFLSMFLTLKSVLDPDTSDPTDILTEQARDFCQRSGSKATKVSDIVATRDQATYRAIQEGIDRVNSTATNRVHCIQKWIVLPRDFSISGGELGPTMKLKRLAVLEKYRNEVDSFYKE
SIO_010081: ACSBG1
subclass of: SO_0000673
so part of: ACSBG1
location: complement(join(442688..442764,443772..444018,445008..445147,446884..447101,448482..448663,449003..449179,451522..451671,454117..454197,455995..456115,456895..456983,458147..458364,466785..466867,475519..475598))
location: region:442688-475598:-1
so has part: feature:475519-475598:-1:exon
so has part: feature:466785-466867:-1:exon
so has part: feature:458147-458364:-1:exon
so has part: feature:456895-456983:-1:exon
so has part: feature:455995-456115:-1:exon
so has part: feature:454117-454197:-1:exon
so has part: feature:451522-451671:-1:exon
so has part: feature:449003-449179:-1:exon
so has part: feature:448482-448663:-1:exon
so has part: feature:446884-447101:-1:exon
so has part: feature:445008-445147:-1:exon
so has part: feature:443772-444018:-1:exon
so has part: feature:442688-442764:-1:exon

XP_021403027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:475519-475598:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:466785-466867:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:458147-458364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:456895-456983:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:455995-456115:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:454117-454197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:451522-451671:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:449003-449179:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:448482-448663:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:446884-447101:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:445008-445147:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:443772-444018:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:442688-442764:-1:exon

ACSBG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ACSBG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: long-chain-fatty-acid--CoA ligase ACSBG1 isoform X2
translation: MPNSGKTLTKQLQTENARNVSGSCENGAFTDAQTVGRNLLPHLEETRGEGIEPADSLWTSFADGRVRLRIDNSCPQTPITVHQMFKESLEKYGSLNALASKKNGKWEKITFSEYYCLSRKAAKSFLKLGLERFHSVAILGFNSPEWFISAVGAIFAGGIVTGIYATNSPEACHYIAHDSKTDIMVVENQKQLDKIMQIWNRLPHLKAVVLYKDSIAERHPNLYMMEEFLELGDDISDSTLDDIINSQKPNQCCVLIYTSGTTGKPKGAMLSHDNITWTSAHCSRAGGMQPAEVQQESIVSYLPLSHIAAQIYDLWTGIKWGEQVYFAEPDALKGSLINTLKEVQPTSHMGVPRVWEKIMEKLKDASAQSGFMKKKMLSWAMSLSLEKNLHGSNSDLKQLWTRLADYLVLAKIRSALGLSSCQKHFSGAAPLSTETLCFFLGLNITLYEAYGMSETTGPHCLSGPYIYRQHSCGKPVPGCRVKLVDKDTEGNGEICFWGRTVFMGYLNMEDRTKESFDEEGWLHSGDLGKLDNDGFLYVTGRIKDLIITAGGENVPPIPIEDAVKKELPIVSNAMVIGDKKKFLSMFLTLKSVLDPDTSDPTDILTEQARDFCQRSGSKATKVSDIVATRDQATYRAIQEGIDRVNSTATNRVHCIQKWIVLPRDFSISGGELGPTMKLKRLAVLEKYRNEVDSFYKE
SIO_010081: ACSBG1
subclass of: SO_0000673
so part of: ACSBG1
location: complement(join(442688..442764,443772..444018,445008..445147,446884..447101,447655..447885,448482..448663,449003..449179,451522..451671,454117..454197,455995..456115,456895..456983,458147..458364,466785..466867,475519..475598))
location: region:442688-475598:-1
so has part: feature:475519-475598:-1:exon
so has part: feature:466785-466867:-1:exon
so has part: feature:458147-458364:-1:exon
so has part: feature:456895-456983:-1:exon
so has part: feature:455995-456115:-1:exon
so has part: feature:454117-454197:-1:exon
so has part: feature:451522-451671:-1:exon
so has part: feature:449003-449179:-1:exon
so has part: feature:448482-448663:-1:exon
so has part: feature:447655-447885:-1:exon
so has part: feature:446884-447101:-1:exon
so has part: feature:445008-445147:-1:exon
so has part: feature:443772-444018:-1:exon
so has part: feature:442688-442764:-1:exon

XP_021403024.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:475519-475598:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:466785-466867:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:458147-458364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:456895-456983:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:455995-456115:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:454117-454197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:451522-451671:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:449003-449179:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:448482-448663:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:447655-447885:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:446884-447101:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:445008-445147:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:443772-444018:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:442688-442764:-1:exon

ACSBG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ACSBG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: long-chain-fatty-acid--CoA ligase ACSBG1 isoform X1
translation: MPNSGKTLTKQLQTENARNVSGSCENGAFTDAQTVGRNLLPHLEETRGEGIEPADSLWTSFADGRVRLRIDNSCPQTPITVHQMFKESLEKYGSLNALASKKNGKWEKITFSEYYCLSRKAAKSFLKLGLERFHSVAILGFNSPEWFISAVGAIFAGGIVTGIYATNSPEACHYIAHDSKTDIMVVENQKQLDKIMQIWNRLPHLKAVVLYKDSIAERHPNLYMMEEFLELGDDISDSTLDDIINSQKPNQCCVLIYTSGTTGKPKGAMLSHDNITWTSAHCSRAGGMQPAEVQQESIVSYLPLSHIAAQIYDLWTGIKWGEQVYFAEPDALKGSLINTLKEVQPTSHMGVPRVWEKIMEKLKDASAQSGFMKKKMLSWAMSLSLEKNLHGSNSSDLKQLWTRLADYLVLAKIRSALGLSSCQKHFSGAAPLSTETLCFFLGLNITLYEAYGMSETTGPHCLSGPYIYRQHSCGKPVPGCRVKLVDKDTEGNGEICFWGRTVFMGYLNMEDRTKESFDEEGWLHSGDLGKLDNDGFLYVTGRIKDLIITAGGENVPPIPIEDAVKKELPIVSNAMVIGDKKKFLSMFLTLKSVLDPDTSDPTDILTEQARDFCQRSGSKATKVSDIVATRDQATYRAIQEGIDRVNSTATNRVHCIQKWIVLPRDFSISGGELGPTMKLKRLAVLEKYRNEVDSFYKE
SIO_010081: ACSBG1
subclass of: SO_0000673
so part of: ACSBG1
location: complement(join(442688..442764,443772..444018,445008..445147,446884..447101,447655..447888,448482..448663,449003..449179,451522..451671,454117..454197,455995..456115,456895..456983,458147..458364,466785..466867,475519..475598))
location: region:442688-475598:-1
so has part: feature:475519-475598:-1:exon
so has part: feature:466785-466867:-1:exon
so has part: feature:458147-458364:-1:exon
so has part: feature:456895-456983:-1:exon
so has part: feature:455995-456115:-1:exon
so has part: feature:454117-454197:-1:exon
so has part: feature:451522-451671:-1:exon
so has part: feature:449003-449179:-1:exon
so has part: feature:448482-448663:-1:exon
so has part: feature:447655-447888:-1:exon
so has part: feature:446884-447101:-1:exon
so has part: feature:445008-445147:-1:exon
so has part: feature:443772-444018:-1:exon
so has part: feature:442688-442764:-1:exon

XP_021403023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:475519-475598:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:466785-466867:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:458147-458364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:456895-456983:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:455995-456115:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:454117-454197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:451522-451671:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:449003-449179:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:448482-448663:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:447655-447888:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:446884-447101:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:445008-445147:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:443772-444018:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:442688-442764:-1:exon

ACSBG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ACSBG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: long-chain-fatty-acid--CoA ligase ACSBG1 isoform X6
translation: MFKESLEKYGSLNALASKKNGKWEKITFSEYYCLSRKAAKSFLKLGLERFHSVAILGFNSPEWFISAVGAIFAGGIVTGIYATNSPEACHYIAHDSKTDIMVVENQKQLDKIMQIWNRLPHLKAVVLYKDSIAERHPNLYMMEEFLELGDDISDSTLDDIINSQKPNQCCVLIYTSGTTGKPKGAMLSHDNITWTSAHCSRAGGMQPAEVQQESIVSYLPLSHIAAQIYDLWTGIKWGEQVYFAEPDALKGSLINTLKEVQPTSHMGVPRVWEKIMEKLKDASAQSGFMKKKMLSWAMSLSLEKNLHGSNSSDLKQLWTRLADYLVLAKIRSALGLSSCQKHFSGAAPLSTETLCFFLGLNITLYEAYGMSETTGPHCLSGPYIYRQHSCGKPVPGCRVKLVDKDTEGNGEICFWGRTVFMGYLNMEDRTKESFDEEGWLHSGDLGKLDNDGFLYVTGRIKDLIITAGGENVPPIPIEDAVKKELPIVSNAMVIGDKKKFLSMFLTLKSVLDPDTSDPTDILTEQARDFCQRSGSKATKVSDIVATRDQATYRAIQEGIDRVNSTATNRVHCIQKWIVLPRDFSISGGELGPTMKLKRLAVLEKYRNEVDSFYKE
SIO_010081: ACSBG1
subclass of: SO_0000673
so part of: ACSBG1
location: complement(join(442688..442764,443772..444018,445008..445147,446884..447101,447655..447888,448482..448663,449003..449179,451522..451671,454117..454197,455995..456115,456895..456983,458147..458278))
location: region:442688-458278:-1
so has part: feature:458147-458278:-1:exon
so has part: feature:456895-456983:-1:exon
so has part: feature:455995-456115:-1:exon
so has part: feature:454117-454197:-1:exon
so has part: feature:451522-451671:-1:exon
so has part: feature:449003-449179:-1:exon
so has part: feature:448482-448663:-1:exon
so has part: feature:447655-447888:-1:exon
so has part: feature:446884-447101:-1:exon
so has part: feature:445008-445147:-1:exon
so has part: feature:443772-444018:-1:exon
so has part: feature:442688-442764:-1:exon

XP_021403028.1
type: Protein
SIO_000068: ncbiprotein

position:458278:-1
position: 458278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458147-458278:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:456895-456983:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:455995-456115:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:454117-454197:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:451522-451671:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449003-449179:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448482-448663:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:447655-447888:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:446884-447101:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445008-445147:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443772-444018:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:442688-442764:-1:exon

ACSBG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ACSBG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: long-chain-fatty-acid--CoA ligase ACSBG1 isoform X6
translation: MFKESLEKYGSLNALASKKNGKWEKITFSEYYCLSRKAAKSFLKLGLERFHSVAILGFNSPEWFISAVGAIFAGGIVTGIYATNSPEACHYIAHDSKTDIMVVENQKQLDKIMQIWNRLPHLKAVVLYKDSIAERHPNLYMMEEFLELGDDISDSTLDDIINSQKPNQCCVLIYTSGTTGKPKGAMLSHDNITWTSAHCSRAGGMQPAEVQQESIVSYLPLSHIAAQIYDLWTGIKWGEQVYFAEPDALKGSLINTLKEVQPTSHMGVPRVWEKIMEKLKDASAQSGFMKKKMLSWAMSLSLEKNLHGSNSSDLKQLWTRLADYLVLAKIRSALGLSSCQKHFSGAAPLSTETLCFFLGLNITLYEAYGMSETTGPHCLSGPYIYRQHSCGKPVPGCRVKLVDKDTEGNGEICFWGRTVFMGYLNMEDRTKESFDEEGWLHSGDLGKLDNDGFLYVTGRIKDLIITAGGENVPPIPIEDAVKKELPIVSNAMVIGDKKKFLSMFLTLKSVLDPDTSDPTDILTEQARDFCQRSGSKATKVSDIVATRDQATYRAIQEGIDRVNSTATNRVHCIQKWIVLPRDFSISGGELGPTMKLKRLAVLEKYRNEVDSFYKE
SIO_010081: ACSBG1
subclass of: SO_0000673
so part of: ACSBG1
location: complement(join(442688..442764,443772..444018,445008..445147,446884..447101,447655..447888,448482..448663,449003..449179,451522..451671,454117..454197,455995..456115,456895..456983,458147..458278))
location: region:442688-458278:-1
so has part: feature:458147-458278:-1:exon
so has part: feature:456895-456983:-1:exon
so has part: feature:455995-456115:-1:exon
so has part: feature:454117-454197:-1:exon
so has part: feature:451522-451671:-1:exon
so has part: feature:449003-449179:-1:exon
so has part: feature:448482-448663:-1:exon
so has part: feature:447655-447888:-1:exon
so has part: feature:446884-447101:-1:exon
so has part: feature:445008-445147:-1:exon
so has part: feature:443772-444018:-1:exon
so has part: feature:442688-442764:-1:exon

XP_021403030.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:458147-458278:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:456895-456983:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:455995-456115:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:454117-454197:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:451522-451671:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449003-449179:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448482-448663:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:447655-447888:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:446884-447101:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445008-445147:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443772-444018:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:442688-442764:-1:exon

ACSBG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ACSBG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: long-chain-fatty-acid--CoA ligase ACSBG1 isoform X7
translation: MNSLGLERFHSVAILGFNSPEWFISAVGAIFAGGIVTGIYATNSPEACHYIAHDSKTDIMVVENQKQLDKIMQIWNRLPHLKAVVLYKDSIAERHPNLYMMEEFLELGDDISDSTLDDIINSQKPNQCCVLIYTSGTTGKPKGAMLSHDNITWTSAHCSRAGGMQPAEVQQESIVSYLPLSHIAAQIYDLWTGIKWGEQVYFAEPDALKGSLINTLKEVQPTSHMGVPRVWEKIMEKLKDASAQSGFMKKKMLSWAMSLSLEKNLHGSNSSDLKQLWTRLADYLVLAKIRSALGLSSCQKHFSGAAPLSTETLCFFLGLNITLYEAYGMSETTGPHCLSGPYIYRQHSCGKPVPGCRVKLVDKDTEGNGEICFWGRTVFMGYLNMEDRTKESFDEEGWLHSGDLGKLDNDGFLYVTGRIKDLIITAGGENVPPIPIEDAVKKELPIVSNAMVIGDKKKFLSMFLTLKSVLDPDTSDPTDILTEQARDFCQRSGSKATKVSDIVATRDQATYRAIQEGIDRVNSTATNRVHCIQKWIVLPRDFSISGGELGPTMKLKRLAVLEKYRNEVDSFYKE
SIO_010081: ACSBG1
subclass of: SO_0000673
so part of: ACSBG1
location: complement(join(442688..442764,443772..444018,445008..445147,446884..447101,447655..447888,448482..448663,449003..449179,451522..451671,454117..454197,455995..456115,456895..456983,457301..457309))
location: region:442688-457309:-1
so has part: feature:457301-457309:-1:exon
so has part: feature:456895-456983:-1:exon
so has part: feature:455995-456115:-1:exon
so has part: feature:454117-454197:-1:exon
so has part: feature:451522-451671:-1:exon
so has part: feature:449003-449179:-1:exon
so has part: feature:448482-448663:-1:exon
so has part: feature:447655-447888:-1:exon
so has part: feature:446884-447101:-1:exon
so has part: feature:445008-445147:-1:exon
so has part: feature:443772-444018:-1:exon
so has part: feature:442688-442764:-1:exon

XP_021403031.1
type: Protein
SIO_000068: ncbiprotein

position:457309:-1
position: 457309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457301-457309:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:456895-456983:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:455995-456115:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:454117-454197:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:451522-451671:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449003-449179:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448482-448663:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:447655-447888:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:446884-447101:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445008-445147:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443772-444018:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:442688-442764:-1:exon

DNAJA4
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: DNAJA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 482468..488769
location: region:482468-488769:1
so has part: feature:482468-488769:1:exon
subclass of: SO_0000010

110479826
type: Gene
SIO_000068: ncbigene

position:482468:1
position: 482468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488769:1
position: 488769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482468-488769:1:exon

DNAJA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: DNAJA4
product: DnaJ heat shock protein family (Hsp40) member A4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021547359.1
SIO_010081: DNAJA4
subclass of: SO_0000673
so part of: DNAJA4
location: join(482468..482572,482779..482919,484611..484791,485684..485788,486506..486733,486823..487053,487567..487667,487752..488769)
location: region:482468-488769:1
so has part: feature:482468-482572:1:exon
so has part: feature:482779-482919:1:exon
so has part: feature:484611-484791:1:exon
so has part: feature:485684-485788:1:exon
so has part: feature:486506-486733:1:exon
so has part: feature:486823-487053:1:exon
so has part: feature:487567-487667:1:exon
so has part: feature:487752-488769:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:482468-482572:1:exon

position:482572:1
position: 482572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:482779-482919:1:exon

position:482779:1
position: 482779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:482919:1
position: 482919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:484611-484791:1:exon

position:484611:1
position: 484611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484791:1
position: 484791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:485684-485788:1:exon

position:485684:1
position: 485684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485788:1
position: 485788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:486506-486733:1:exon

position:486506:1
position: 486506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486733:1
position: 486733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:486823-487053:1:exon

position:486823:1
position: 486823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487053:1
position: 487053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:487567-487667:1:exon

position:487567:1
position: 487567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487667:1
position: 487667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:487752-488769:1:exon

position:487752:1
position: 487752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DNAJA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: DNAJA4
product: DnaJ heat shock protein family (Hsp40) member A4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_021547357.2
SIO_010081: DNAJA4
subclass of: SO_0000673
so part of: DNAJA4
location: join(482480..482586,482779..482919,484611..484791,485684..485788,486506..486733,486823..487053,487567..487667,487752..488769)
location: region:482480-488769:1
so has part: feature:482480-482586:1:exon
so has part: feature:482779-482919:1:exon
so has part: feature:484611-484791:1:exon
so has part: feature:485684-485788:1:exon
so has part: feature:486506-486733:1:exon
so has part: feature:486823-487053:1:exon
so has part: feature:487567-487667:1:exon
so has part: feature:487752-488769:1:exon

position:482480:1
position: 482480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482480-482586:1:exon

position:482586:1
position: 482586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:482779-482919:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:484611-484791:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:485684-485788:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:486506-486733:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:486823-487053:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:487567-487667:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:487752-488769:1:exon

DNAJA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: DNAJA4
product: DnaJ heat shock protein family (Hsp40) member A4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_021547360.2
SIO_010081: DNAJA4
subclass of: SO_0000673
so part of: DNAJA4
location: join(482497..482592,482779..482919,484611..484791,485684..485788,486506..486733,486823..487053,487567..487667,487752..488769)
location: region:482497-488769:1
so has part: feature:482497-482592:1:exon
so has part: feature:482779-482919:1:exon
so has part: feature:484611-484791:1:exon
so has part: feature:485684-485788:1:exon
so has part: feature:486506-486733:1:exon
so has part: feature:486823-487053:1:exon
so has part: feature:487567-487667:1:exon
so has part: feature:487752-488769:1:exon

position:482497:1
position: 482497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482497-482592:1:exon

position:482592:1
position: 482592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:482779-482919:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:484611-484791:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:485684-485788:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:486506-486733:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:486823-487053:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:487567-487667:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:487752-488769:1:exon

DNAJA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: DNAJA4
product: DnaJ heat shock protein family (Hsp40) member A4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_021547358.2
SIO_010081: DNAJA4
subclass of: SO_0000673
so part of: DNAJA4
location: join(482538..482688,482779..482919,484611..484791,485684..485788,486506..486733,486823..487053,487567..487667,487752..488769)
location: region:482538-488769:1
so has part: feature:482538-482688:1:exon
so has part: feature:482779-482919:1:exon
so has part: feature:484611-484791:1:exon
so has part: feature:485684-485788:1:exon
so has part: feature:486506-486733:1:exon
so has part: feature:486823-487053:1:exon
so has part: feature:487567-487667:1:exon
so has part: feature:487752-488769:1:exon

position:482538:1
position: 482538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482538-482688:1:exon

position:482688:1
position: 482688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:482779-482919:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:484611-484791:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:485684-485788:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:486506-486733:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:486823-487053:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:487567-487667:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:487752-488769:1:exon

DNAJA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: DNAJA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily A member 4
translation: MVKETEYYDILQVKPNASSEEIKRAYRKLALKYHPDKNPSEGERFKLISQAYEVLSDPKKRDLYDQGGEQAIKEGGLSGGSFSSPMDIFDMFFGGGGRMNRERRGKNVVHQLGVSLEDLYNGITRKLALQKNVICAKCEGYGGKRGAVEKCPVCKGRGMQVIVQQIGPGMVQQIQTVCPECKGQGERINPKDRCDNCNGCKVVREKKIIEVHVDKGMKDGQKIVFHGEGDQEPDLEPGDVIIVLDQKDHSVFQRRGHDLITKMRIQLSEALCGFRKTIETLDNRVLVISTRPGEVIKHGDLKCIYNEGMPVYKSPMDKGSLIIQFLVQFPEHYWLPREKLSLLEALLPSREDVMVTDEMDQVDLEDFDPNEQTYRNSAGEAYEEDEEGPRTGVQCQAS
SIO_010081: DNAJA4
subclass of: SO_0000673
so part of: DNAJA4
location: join(482788..482919,484611..484791,485684..485788,486506..486733,486823..487053,487567..487667,487752..487970)
location: region:482788-487970:1
so has part: feature:482788-482919:1:exon
so has part: feature:484611-484791:1:exon
so has part: feature:485684-485788:1:exon
so has part: feature:486506-486733:1:exon
so has part: feature:486823-487053:1:exon
so has part: feature:487567-487667:1:exon
so has part: feature:487752-487970:1:exon

XP_021403032.1
type: Protein
SIO_000068: ncbiprotein

position:482788:1
position: 482788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487970:1
position: 487970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482788-482919:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:484611-484791:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:485684-485788:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:486506-486733:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:486823-487053:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:487567-487667:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:487752-487970:1:exon

DNAJA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: DNAJA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily A member 4
translation: MVKETEYYDILQVKPNASSEEIKRAYRKLALKYHPDKNPSEGERFKLISQAYEVLSDPKKRDLYDQGGEQAIKEGGLSGGSFSSPMDIFDMFFGGGGRMNRERRGKNVVHQLGVSLEDLYNGITRKLALQKNVICAKCEGYGGKRGAVEKCPVCKGRGMQVIVQQIGPGMVQQIQTVCPECKGQGERINPKDRCDNCNGCKVVREKKIIEVHVDKGMKDGQKIVFHGEGDQEPDLEPGDVIIVLDQKDHSVFQRRGHDLITKMRIQLSEALCGFRKTIETLDNRVLVISTRPGEVIKHGDLKCIYNEGMPVYKSPMDKGSLIIQFLVQFPEHYWLPREKLSLLEALLPSREDVMVTDEMDQVDLEDFDPNEQTYRNSAGEAYEEDEEGPRTGVQCQAS
SIO_010081: DNAJA4
subclass of: SO_0000673
so part of: DNAJA4
location: join(482788..482919,484611..484791,485684..485788,486506..486733,486823..487053,487567..487667,487752..487970)
location: region:482788-487970:1
so has part: feature:482788-482919:1:exon
so has part: feature:484611-484791:1:exon
so has part: feature:485684-485788:1:exon
so has part: feature:486506-486733:1:exon
so has part: feature:486823-487053:1:exon
so has part: feature:487567-487667:1:exon
so has part: feature:487752-487970:1:exon

XP_021403033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:482788-482919:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:484611-484791:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:485684-485788:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:486506-486733:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:486823-487053:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:487567-487667:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:487752-487970:1:exon

DNAJA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: DNAJA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily A member 4
translation: MVKETEYYDILQVKPNASSEEIKRAYRKLALKYHPDKNPSEGERFKLISQAYEVLSDPKKRDLYDQGGEQAIKEGGLSGGSFSSPMDIFDMFFGGGGRMNRERRGKNVVHQLGVSLEDLYNGITRKLALQKNVICAKCEGYGGKRGAVEKCPVCKGRGMQVIVQQIGPGMVQQIQTVCPECKGQGERINPKDRCDNCNGCKVVREKKIIEVHVDKGMKDGQKIVFHGEGDQEPDLEPGDVIIVLDQKDHSVFQRRGHDLITKMRIQLSEALCGFRKTIETLDNRVLVISTRPGEVIKHGDLKCIYNEGMPVYKSPMDKGSLIIQFLVQFPEHYWLPREKLSLLEALLPSREDVMVTDEMDQVDLEDFDPNEQTYRNSAGEAYEEDEEGPRTGVQCQAS
SIO_010081: DNAJA4
subclass of: SO_0000673
so part of: DNAJA4
location: join(482788..482919,484611..484791,485684..485788,486506..486733,486823..487053,487567..487667,487752..487970)
location: region:482788-487970:1
so has part: feature:482788-482919:1:exon
so has part: feature:484611-484791:1:exon
so has part: feature:485684-485788:1:exon
so has part: feature:486506-486733:1:exon
so has part: feature:486823-487053:1:exon
so has part: feature:487567-487667:1:exon
so has part: feature:487752-487970:1:exon

XP_021403034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:482788-482919:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:484611-484791:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:485684-485788:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:486506-486733:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:486823-487053:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:487567-487667:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:487752-487970:1:exon

DNAJA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: DNAJA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily A member 4
translation: MVKETEYYDILQVKPNASSEEIKRAYRKLALKYHPDKNPSEGERFKLISQAYEVLSDPKKRDLYDQGGEQAIKEGGLSGGSFSSPMDIFDMFFGGGGRMNRERRGKNVVHQLGVSLEDLYNGITRKLALQKNVICAKCEGYGGKRGAVEKCPVCKGRGMQVIVQQIGPGMVQQIQTVCPECKGQGERINPKDRCDNCNGCKVVREKKIIEVHVDKGMKDGQKIVFHGEGDQEPDLEPGDVIIVLDQKDHSVFQRRGHDLITKMRIQLSEALCGFRKTIETLDNRVLVISTRPGEVIKHGDLKCIYNEGMPVYKSPMDKGSLIIQFLVQFPEHYWLPREKLSLLEALLPSREDVMVTDEMDQVDLEDFDPNEQTYRNSAGEAYEEDEEGPRTGVQCQAS
SIO_010081: DNAJA4
subclass of: SO_0000673
so part of: DNAJA4
location: join(482788..482919,484611..484791,485684..485788,486506..486733,486823..487053,487567..487667,487752..487970)
location: region:482788-487970:1
so has part: feature:482788-482919:1:exon
so has part: feature:484611-484791:1:exon
so has part: feature:485684-485788:1:exon
so has part: feature:486506-486733:1:exon
so has part: feature:486823-487053:1:exon
so has part: feature:487567-487667:1:exon
so has part: feature:487752-487970:1:exon

XP_021403035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:482788-482919:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:484611-484791:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:485684-485788:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:486506-486733:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:486823-487053:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:487567-487667:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:487752-487970:1:exon

LOC110479828
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110479828
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(489189..493893)
location: region:489189-493893:-1
so has part: feature:489189-493893:-1:exon
subclass of: SO_0000010

110479828
type: Gene
SIO_000068: ncbigene

position:489189:-1
position: 489189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:493893:-1
position: 493893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489189-493893:-1:exon

LOC110479828
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110479828
product: WD repeat-containing protein 61
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_021547362.2
SIO_010081: LOC110479828
subclass of: SO_0000673
so part of: LOC110479828
location: complement(join(489189..489462,490886..490964,491581..491673,492310..492403,493181..493274,493598..493893))
location: region:489189-493893:-1
so has part: feature:493598-493893:-1:exon
so has part: feature:493181-493274:-1:exon
so has part: feature:492310-492403:-1:exon
so has part: feature:491581-491673:-1:exon
so has part: feature:490886-490964:-1:exon
so has part: feature:489189-489462:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:493598-493893:-1:exon

position:493598:-1
position: 493598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:493181-493274:-1:exon

position:493181:-1
position: 493181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:493274:-1
position: 493274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:492310-492403:-1:exon

position:492310:-1
position: 492310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:492403:-1
position: 492403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:491581-491673:-1:exon

position:491581:-1
position: 491581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491673:-1
position: 491673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:490886-490964:-1:exon

position:490886:-1
position: 490886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490964:-1
position: 490964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:489189-489462:-1:exon

position:489462:-1
position: 489462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110479828
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110479828
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 61
translation: MHIELTLLNKNQEQDPANWFLFFNTVDAWSLAFSPDSQYLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIYDCPV
SIO_010081: LOC110479828
subclass of: SO_0000673
so part of: LOC110479828
location: complement(join(489373..489462,490886..490964,491581..491673,492310..492403,493181..493274,493598..493822))
location: region:489373-493822:-1
so has part: feature:493598-493822:-1:exon
so has part: feature:493181-493274:-1:exon
so has part: feature:492310-492403:-1:exon
so has part: feature:491581-491673:-1:exon
so has part: feature:490886-490964:-1:exon
so has part: feature:489373-489462:-1:exon

XP_021403037.1
type: Protein
SIO_000068: ncbiprotein

position:489373:-1
position: 489373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:493822:-1
position: 493822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493598-493822:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:493181-493274:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:492310-492403:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:491581-491673:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:490886-490964:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:489373-489462:-1:exon

LOC110479446
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110479446
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 494033..496480
location: region:494033-496480:1
so has part: feature:494033-496480:1:exon
subclass of: SO_0000010

110479446
type: Gene
SIO_000068: ncbigene

position:494033:1
position: 494033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496480:1
position: 496480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494033-496480:1:exon

LOC110479446
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110479446
product: dnaJ homolog subfamily A member 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_021546780.1
SIO_010081: LOC110479446
subclass of: SO_0000673
so part of: LOC110479446
location: join(494033..494444,494534..494764,495278..495378,495463..496480)
location: region:494033-496480:1
so has part: feature:494033-494444:1:exon
so has part: feature:494534-494764:1:exon
so has part: feature:495278-495378:1:exon
so has part: feature:495463-496480:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:494033-494444:1:exon

position:494444:1
position: 494444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:494534-494764:1:exon

position:494534:1
position: 494534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494764:1
position: 494764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:495278-495378:1:exon

position:495278:1
position: 495278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495378:1
position: 495378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:495463-496480:1:exon

position:495463:1
position: 495463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110479446
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110479446
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily A member 4
translation: MQVIVQQIGPGMVQQIQTVCPECKGQGERINPKDRCDNCNGCKVVREKKIIEVHVDKGMKDGQKIVFHGEGDQEPDLEPGDVIIVLDQKDHSVFQRRGHDLITKMRIQLSEALCGFRKTIETLDNRVLVISTRPGEVIKHGDLKCIYNEGMPVYKSPMDKGSLIIQFLVQFPEHYWLPREKLSLLEALLPSREDVMVTDEMDQVDLEDFDPNEQTYRNSAGEAYEEDEEGPRTGVQCQAS
SIO_010081: LOC110479446
subclass of: SO_0000673
so part of: LOC110479446
location: join(494273..494444,494534..494764,495278..495378,495463..495681)
location: region:494273-495681:1
so has part: feature:494273-494444:1:exon
so has part: feature:494534-494764:1:exon
so has part: feature:495278-495378:1:exon
so has part: feature:495463-495681:1:exon

XP_021402455.1
type: Protein
SIO_000068: ncbiprotein

position:494273:1
position: 494273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495681:1
position: 495681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494273-494444:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:494534-494764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:495278-495378:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:495463-495681:1:exon

WDR61
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: WDR61
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(496903..504211)
location: region:496903-504211:-1
so has part: feature:496903-504211:-1:exon
subclass of: SO_0000010

110479445
type: Gene
SIO_000068: ncbigene

position:496903:-1
position: 496903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504211:-1
position: 504211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:496903-504211:-1:exon

WDR61
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: WDR61
product: WD repeat domain 61
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 20 ESTs, 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021546778.2
SIO_010081: WDR61
subclass of: SO_0000673
so part of: WDR61
location: complement(join(496903..497168,498592..498670,499286..499378,500013..500106,500884..500977,501301..501449,502489..502661,503469..503574,503915..503942,504069..504211))
location: region:496903-504211:-1
so has part: feature:504069-504211:-1:exon
so has part: feature:503915-503942:-1:exon
so has part: feature:503469-503574:-1:exon
so has part: feature:502489-502661:-1:exon
so has part: feature:501301-501449:-1:exon
so has part: feature:500884-500977:-1:exon
so has part: feature:500013-500106:-1:exon
so has part: feature:499286-499378:-1:exon
so has part: feature:498592-498670:-1:exon
so has part: feature:496903-497168:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:504069-504211:-1:exon

position:504069:-1
position: 504069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:503915-503942:-1:exon

position:503915:-1
position: 503915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:503942:-1
position: 503942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:503469-503574:-1:exon

position:503469:-1
position: 503469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:503574:-1
position: 503574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:502489-502661:-1:exon

position:502489:-1
position: 502489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502661:-1
position: 502661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:501301-501449:-1:exon

position:501301:-1
position: 501301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501449:-1
position: 501449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:500884-500977:-1:exon

position:500884:-1
position: 500884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500977:-1
position: 500977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:500013-500106:-1:exon

position:500013:-1
position: 500013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500106:-1
position: 500106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:499286-499378:-1:exon

position:499286:-1
position: 499286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499378:-1
position: 499378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:498592-498670:-1:exon

position:498592:-1
position: 498592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498670:-1
position: 498670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:496903-497168:-1:exon

position:497168:-1
position: 497168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WDR61
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: WDR61
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 61
translation: MTTQYGILFKQEQAHDDAIWSVAWGKNKNDGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHTGAIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQYLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIYDCPV
SIO_010081: WDR61
subclass of: SO_0000673
so part of: WDR61
location: complement(join(497079..497168,498592..498670,499286..499378,500013..500106,500884..500977,501301..501449,502489..502661,503469..503574,503915..503942,504069..504080))
location: region:497079-504080:-1
so has part: feature:504069-504080:-1:exon
so has part: feature:503915-503942:-1:exon
so has part: feature:503469-503574:-1:exon
so has part: feature:502489-502661:-1:exon
so has part: feature:501301-501449:-1:exon
so has part: feature:500884-500977:-1:exon
so has part: feature:500013-500106:-1:exon
so has part: feature:499286-499378:-1:exon
so has part: feature:498592-498670:-1:exon
so has part: feature:497079-497168:-1:exon

XP_021402453.1
type: Protein
SIO_000068: ncbiprotein

position:497079:-1
position: 497079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504080:-1
position: 504080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504069-504080:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:503915-503942:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:503469-503574:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:502489-502661:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:501301-501449:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:500884-500977:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:500013-500106:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:499286-499378:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:498592-498670:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:497079-497168:-1:exon

CRABP1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: CRABP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 554844..568143
location: region:554844-568143:1
so has part: feature:554844-568143:1:exon
subclass of: SO_0000010

110479456
type: Gene
SIO_000068: ncbigene

position:554844:1
position: 554844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:568143:1
position: 568143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554844-568143:1:exon

CRABP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: CRABP1
product: cellular retinoic acid binding protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 78 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021546799.2
SIO_010081: CRABP1
subclass of: SO_0000673
so part of: CRABP1
location: join(554844..555088,555510..555688,558339..558452,567815..568143)
location: region:554844-568143:1
so has part: feature:554844-555088:1:exon
so has part: feature:555510-555688:1:exon
so has part: feature:558339-558452:1:exon
so has part: feature:567815-568143:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:554844-555088:1:exon

position:555088:1
position: 555088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:555510-555688:1:exon

position:555510:1
position: 555510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555688:1
position: 555688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:558339-558452:1:exon

position:558339:1
position: 558339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558452:1
position: 558452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:567815-568143:1:exon

position:567815:1
position: 567815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CRABP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: CRABP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cellular retinoic acid-binding protein 1
translation: MLARGKGWGAGWVCPALPAAAAAVRPTHKVPEPESEQQRRVPSALRSARPAMPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTVRTTEINFKIGESFEEETVDGRKCRSLATWENENKIYCKQTLIEGDGPKTYWTRELANDELILTFGADDVVCTRIYVRE
SIO_010081: CRABP1
subclass of: SO_0000673
so part of: CRABP1
location: join(554866..555088,555510..555688,558339..558452,567815..567865)
location: region:554866-567865:1
so has part: feature:554866-555088:1:exon
so has part: feature:555510-555688:1:exon
so has part: feature:558339-558452:1:exon
so has part: feature:567815-567865:1:exon

XP_021402474.1
type: Protein
SIO_000068: ncbiprotein

position:554866:1
position: 554866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567865:1
position: 567865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554866-555088:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:555510-555688:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:558339-558452:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:567815-567865:1:exon

IREB2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: IREB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 587918..611427
location: region:587918-611427:1
so has part: feature:587918-611427:1:exon
subclass of: SO_0000010

110479451
type: Gene
SIO_000068: ncbigene

position:587918:1
position: 587918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611427:1
position: 611427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587918-611427:1:exon

IREB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: IREB2
product: iron responsive element binding protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 35 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021546785.1
SIO_010081: IREB2
subclass of: SO_0000673
so part of: IREB2
location: join(587918..588036,588635..588724,591695..591860,593011..593148,595157..595378,596956..597025,598041..598224,598782..598921,599297..599468,600511..600611,601048..601164,602260..602419,603250..603385,603989..604073,604683..604839,605121..605245,605536..605640,605913..606055,606496..606643,606733..606855,607372..607557,608265..611427)
location: region:587918-611427:1
so has part: feature:587918-588036:1:exon
so has part: feature:588635-588724:1:exon
so has part: feature:591695-591860:1:exon
so has part: feature:593011-593148:1:exon
so has part: feature:595157-595378:1:exon
so has part: feature:596956-597025:1:exon
so has part: feature:598041-598224:1:exon
so has part: feature:598782-598921:1:exon
so has part: feature:599297-599468:1:exon
so has part: feature:600511-600611:1:exon
so has part: feature:601048-601164:1:exon
so has part: feature:602260-602419:1:exon
so has part: feature:603250-603385:1:exon
so has part: feature:603989-604073:1:exon
so has part: feature:604683-604839:1:exon
so has part: feature:605121-605245:1:exon
so has part: feature:605536-605640:1:exon
so has part: feature:605913-606055:1:exon
so has part: feature:606496-606643:1:exon
so has part: feature:606733-606855:1:exon
so has part: feature:607372-607557:1:exon
so has part: feature:608265-611427:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:587918-588036:1:exon

position:588036:1
position: 588036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:588635-588724:1:exon

position:588635:1
position: 588635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:588724:1
position: 588724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:591695-591860:1:exon

position:591695:1
position: 591695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591860:1
position: 591860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:593011-593148:1:exon

position:593011:1
position: 593011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:593148:1
position: 593148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:595157-595378:1:exon

position:595157:1
position: 595157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595378:1
position: 595378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:596956-597025:1:exon

position:596956:1
position: 596956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:597025:1
position: 597025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:598041-598224:1:exon

position:598041:1
position: 598041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598224:1
position: 598224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:598782-598921:1:exon

position:598782:1
position: 598782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598921:1
position: 598921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:599297-599468:1:exon

position:599297:1
position: 599297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599468:1
position: 599468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:600511-600611:1:exon

position:600511:1
position: 600511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600611:1
position: 600611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:601048-601164:1:exon

position:601048:1
position: 601048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601164:1
position: 601164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:602260-602419:1:exon

position:602260:1
position: 602260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602419:1
position: 602419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:603250-603385:1:exon

position:603250:1
position: 603250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603385:1
position: 603385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:603989-604073:1:exon

position:603989:1
position: 603989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604073:1
position: 604073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:604683-604839:1:exon

position:604683:1
position: 604683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604839:1
position: 604839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:605121-605245:1:exon

position:605121:1
position: 605121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605245:1
position: 605245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:605536-605640:1:exon

position:605536:1
position: 605536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605640:1
position: 605640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:605913-606055:1:exon

position:605913:1
position: 605913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:606055:1
position: 606055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:606496-606643:1:exon

position:606496:1
position: 606496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:606643:1
position: 606643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:606733-606855:1:exon

position:606733:1
position: 606733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:606855:1
position: 606855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:607372-607557:1:exon

position:607372:1
position: 607372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607557:1
position: 607557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:608265-611427:1:exon

position:608265:1
position: 608265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IREB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: IREB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: iron-responsive element-binding protein 2
translation: MDPPRAGSPYQPAIEALQSHPEKKFYNVSKLGGAKYDTLPYSIRVLFESSVRNCDGFLVKETDAMNILDWKIKQNHVEVPFCPARVVLQDFTGIPAMVDFAAMREAVRNAGGDPVKVNPACPTDLTVDHSLQIDFSKCAIQNAPNPGGGEQKPLARLSPLKPPLRKPPPCRGHSSCQGSCSAGEAGRSSGPFSAQIENTPILCPFHLQPVPEPETVLKNQEMEFGRNRERLQFFKWSSKVFENISIIPPEIGMAHQVNLEYLSRVVFDVKDFLHPDSVVGTDSHTTMVNGLGILGWGVGGIETEAVMLGMPLTLTLPEVVGCELTGTVSPFATSIDIVLSVTKHLRQADVAGKFVEFFGSGVSQLSVADRTTIANMCPEYGAILSFFPVDNVTLKHLKHAGFDKAKLEVTEAYLKAVKLFRNDEGSSREPQYSQVVQVSLSSIIPYVSGPKRSQDRVAVNNMKSDFQACLNEKSGVKGFQIAAEKQNDIVPVQYEGNEYKLSHGCVVIAAVISCTNNCNPSVMLAAGLLAKKAVEAGLVVKPYIRTSLSPGSGMVTHYLSSSGVLPYLSKLGFEVVGYGCSTCVGNMAPLPEAIRNAIKQGDIIACGVLSGTKNFEGRLCDCVRANYLASPPLVVAYAIAGTVQIDFDTEPLGTGFNGKSIYLRDIWPTRQELHTVEEERVISSMFKELKEKMEKGNKRWNLLEAPESTLFPWDLKSTYIRCPSFFDKLAKEAVPPQAVENAHVLLFLGDSVTTDHISPAGSIARSSAAAKYLTSKGLTPREFNSYGARRGNDAVMTRGTFANIKLLNKFIGKPAPKTIHFPSGQTLDVFEAAELYQKEGIPVIILAGKKYGLGSSRDWAAKGPFLLGVKAVLAESYEKVHRSQLIGIGIAPLQFCPGENPSTLGLTGKEQFSILFPPDLSPRMTLDIKTSTGKVFSVVALFENNVEITLYKNGGSLNFVARRFLL
SIO_010081: IREB2
subclass of: SO_0000673
so part of: IREB2
location: join(588018..588036,588635..588724,591695..591860,593011..593148,595157..595378,596956..597025,598041..598224,598782..598921,599297..599468,600511..600611,601048..601164,602260..602419,603250..603385,603989..604073,604683..604839,605121..605245,605536..605640,605913..606055,606496..606643,606733..606855,607372..607557,608265..608378)
location: region:588018-608378:1
so has part: feature:588018-588036:1:exon
so has part: feature:588635-588724:1:exon
so has part: feature:591695-591860:1:exon
so has part: feature:593011-593148:1:exon
so has part: feature:595157-595378:1:exon
so has part: feature:596956-597025:1:exon
so has part: feature:598041-598224:1:exon
so has part: feature:598782-598921:1:exon
so has part: feature:599297-599468:1:exon
so has part: feature:600511-600611:1:exon
so has part: feature:601048-601164:1:exon
so has part: feature:602260-602419:1:exon
so has part: feature:603250-603385:1:exon
so has part: feature:603989-604073:1:exon
so has part: feature:604683-604839:1:exon
so has part: feature:605121-605245:1:exon
so has part: feature:605536-605640:1:exon
so has part: feature:605913-606055:1:exon
so has part: feature:606496-606643:1:exon
so has part: feature:606733-606855:1:exon
so has part: feature:607372-607557:1:exon
so has part: feature:608265-608378:1:exon

XP_021402460.1
type: Protein
SIO_000068: ncbiprotein

position:588018:1
position: 588018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608378:1
position: 608378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588018-588036:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:588635-588724:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:591695-591860:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:593011-593148:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:595157-595378:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:596956-597025:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:598041-598224:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:598782-598921:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:599297-599468:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:600511-600611:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:601048-601164:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:602260-602419:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:603250-603385:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:603989-604073:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:604683-604839:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:605121-605245:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:605536-605640:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:605913-606055:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:606496-606643:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:606733-606855:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:607372-607557:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:608265-608378:1:exon

PSMA4
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: PSMA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 613259..627125
location: region:613259-627125:1
so has part: feature:613259-627125:1:exon
subclass of: SO_0000010

110479452
type: Gene
SIO_000068: ncbigene

position:613259:1
position: 613259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627125:1
position: 627125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:613259-627125:1:exon

PSMA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PSMA4
product: proteasome 20S subunit alpha 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 35 ESTs, 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021546787.2
SIO_010081: PSMA4
subclass of: SO_0000673
so part of: PSMA4
location: join(613259..613415,613522..613600,613893..614230,614931..615073,616914..617097,617737..617854,619009..619048,619207..619249,620012..620174,621494..621571,621795..621883,622744..622874,623097..623220,623651..627125)
location: region:613259-627125:1
so has part: feature:613259-613415:1:exon
so has part: feature:613522-613600:1:exon
so has part: feature:613893-614230:1:exon
so has part: feature:614931-615073:1:exon
so has part: feature:616914-617097:1:exon
so has part: feature:617737-617854:1:exon
so has part: feature:619009-619048:1:exon
so has part: feature:619207-619249:1:exon
so has part: feature:620012-620174:1:exon
so has part: feature:621494-621571:1:exon
so has part: feature:621795-621883:1:exon
so has part: feature:622744-622874:1:exon
so has part: feature:623097-623220:1:exon
so has part: feature:623651-627125:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:613259-613415:1:exon

position:613415:1
position: 613415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:613522-613600:1:exon

position:613522:1
position: 613522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:613600:1
position: 613600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:613893-614230:1:exon

position:613893:1
position: 613893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614230:1
position: 614230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:614931-615073:1:exon

position:614931:1
position: 614931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615073:1
position: 615073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:616914-617097:1:exon

position:616914:1
position: 616914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:617097:1
position: 617097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:617737-617854:1:exon

position:617737:1
position: 617737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:617854:1
position: 617854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:619009-619048:1:exon

position:619009:1
position: 619009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:619048:1
position: 619048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:619207-619249:1:exon

position:619207:1
position: 619207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:619249:1
position: 619249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:620012-620174:1:exon

position:620012:1
position: 620012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:620174:1
position: 620174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:621494-621571:1:exon

position:621494:1
position: 621494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:621571:1
position: 621571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:621795-621883:1:exon

position:621795:1
position: 621795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:621883:1
position: 621883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:622744-622874:1:exon

position:622744:1
position: 622744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622874:1
position: 622874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:623097-623220:1:exon

position:623097:1
position: 623097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623220:1
position: 623220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:623651-627125:1:exon

position:623651:1
position: 623651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSMA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PSMA4
product: proteasome 20S subunit alpha 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 35 ESTs, 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021546788.2
SIO_010081: PSMA4
subclass of: SO_0000673
so part of: PSMA4
location: join(613259..613415,613522..613600,613893..614230,614931..615073,616914..617097,617737..617848,619009..619048,619207..619249,620012..620174,621494..621571,621795..621883,622744..622874,623097..623220,623651..627125)
location: region:613259-627125:1
so has part: feature:613259-613415:1:exon
so has part: feature:613522-613600:1:exon
so has part: feature:613893-614230:1:exon
so has part: feature:614931-615073:1:exon
so has part: feature:616914-617097:1:exon
so has part: feature:617737-617848:1:exon
so has part: feature:619009-619048:1:exon
so has part: feature:619207-619249:1:exon
so has part: feature:620012-620174:1:exon
so has part: feature:621494-621571:1:exon
so has part: feature:621795-621883:1:exon
so has part: feature:622744-622874:1:exon
so has part: feature:623097-623220:1:exon
so has part: feature:623651-627125:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:613259-613415:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:613522-613600:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:613893-614230:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:614931-615073:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:616914-617097:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:617737-617848:1:exon

position:617848:1
position: 617848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:619009-619048:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:619207-619249:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:620012-620174:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:621494-621571:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:621795-621883:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:622744-622874:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:623097-623220:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:623651-627125:1:exon

PSMA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PSMA4
product: proteasome 20S subunit alpha 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 35 ESTs, 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021546789.2
SIO_010081: PSMA4
subclass of: SO_0000673
so part of: PSMA4
location: join(613260..613415,613522..613600,613893..613951,614060..614230,614931..615073,616914..617097,617737..617854,619009..619048,619207..619249,620012..620174,621494..621571,621795..621883,622744..622874,623097..623220,623651..627125)
location: region:613260-627125:1
so has part: feature:613260-613415:1:exon
so has part: feature:613522-613600:1:exon
so has part: feature:613893-613951:1:exon
so has part: feature:614060-614230:1:exon
so has part: feature:614931-615073:1:exon
so has part: feature:616914-617097:1:exon
so has part: feature:617737-617854:1:exon
so has part: feature:619009-619048:1:exon
so has part: feature:619207-619249:1:exon
so has part: feature:620012-620174:1:exon
so has part: feature:621494-621571:1:exon
so has part: feature:621795-621883:1:exon
so has part: feature:622744-622874:1:exon
so has part: feature:623097-623220:1:exon
so has part: feature:623651-627125:1:exon

position:613260:1
position: 613260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:613260-613415:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:613522-613600:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:613893-613951:1:exon

position:613951:1
position: 613951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:614060-614230:1:exon

position:614060:1
position: 614060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:614931-615073:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:616914-617097:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:617737-617854:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:619009-619048:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:619207-619249:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:620012-620174:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:621494-621571:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:621795-621883:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:622744-622874:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:623097-623220:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:623651-627125:1:exon

PSMA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PSMA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome subunit alpha type-4 isoform X1
translation: MSSGNDCQPQTLTKPTFGEREAAELVDRVFGLKVSWIRSLPSYDDQNFHVCVSAESADEYVLKITNSEDSQEPDLIEAQTQAMMFLSAEGFPSATPYLTKDGNIMSLESAGTRLGSKKYMVRLLTYLPGTPVAKITTNAQILYEIGRLAASLDKVLLEKFQHPSVKSLHRGQFIWNLANVPLLDQYIYALGQNKYCAVVEQVIEQFKDKVIPKLSSFRACINHGDLNDHNILVDSSSASLENPQYRVSGILDFSDMSYGPGALCPRRVPGTMSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKTALALAIKVLNKTMDVSKLSAEKVEIATLTRENGKTVIRVLKQKEVEQLIKQHEEEEAKAEREKKEKEQKEKDK
SIO_010081: PSMA4
subclass of: SO_0000673
so part of: PSMA4
location: join(613900..614230,614931..615073,616914..617097,617737..617854,619009..619048,619207..619249,620012..620174,621494..621571,621795..621883,622744..622874,623097..623220,623651..623805)
location: region:613900-623805:1
so has part: feature:613900-614230:1:exon
so has part: feature:614931-615073:1:exon
so has part: feature:616914-617097:1:exon
so has part: feature:617737-617854:1:exon
so has part: feature:619009-619048:1:exon
so has part: feature:619207-619249:1:exon
so has part: feature:620012-620174:1:exon
so has part: feature:621494-621571:1:exon
so has part: feature:621795-621883:1:exon
so has part: feature:622744-622874:1:exon
so has part: feature:623097-623220:1:exon
so has part: feature:623651-623805:1:exon

XP_021402462.1
type: Protein
SIO_000068: ncbiprotein

position:613900:1
position: 613900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623805:1
position: 623805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:613900-614230:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:614931-615073:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:616914-617097:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617737-617854:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:619009-619048:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:619207-619249:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:620012-620174:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:621494-621571:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:621795-621883:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:622744-622874:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:623097-623220:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:623651-623805:1:exon

PSMA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PSMA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome subunit alpha type-4 isoform X2
translation: MSSGNDCQPQTLTKPTFGEREAAELVDRVFGLKVSWIRSLPSYDDQNFHVCVSAESADEYVLKITNSEDSQEPDLIEAQTQAMMFLSAEGFPSATPYLTKDGNIMSLESAGTRLGSKKYMVRLLTYLPGTPVAKITTNAQILYEIGRLAASLDKVLLEKFQHPSVKSLHRGQFIWNLANVPLLDQYIYALGQNKYCAVVEQVIEQFKDKVIPKLSSFRACINHGDLNDHNILVDSSSASLENPQYRVSGILDFSDMRPGALCPRRVPGTMSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKTALALAIKVLNKTMDVSKLSAEKVEIATLTRENGKTVIRVLKQKEVEQLIKQHEEEEAKAEREKKEKEQKEKDK
SIO_010081: PSMA4
subclass of: SO_0000673
so part of: PSMA4
location: join(613900..614230,614931..615073,616914..617097,617737..617848,619009..619048,619207..619249,620012..620174,621494..621571,621795..621883,622744..622874,623097..623220,623651..623805)
location: region:613900-623805:1
so has part: feature:613900-614230:1:exon
so has part: feature:614931-615073:1:exon
so has part: feature:616914-617097:1:exon
so has part: feature:617737-617848:1:exon
so has part: feature:619009-619048:1:exon
so has part: feature:619207-619249:1:exon
so has part: feature:620012-620174:1:exon
so has part: feature:621494-621571:1:exon
so has part: feature:621795-621883:1:exon
so has part: feature:622744-622874:1:exon
so has part: feature:623097-623220:1:exon
so has part: feature:623651-623805:1:exon

XP_021402463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:613900-614230:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:614931-615073:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:616914-617097:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617737-617848:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:619009-619048:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:619207-619249:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:620012-620174:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:621494-621571:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:621795-621883:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:622744-622874:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:623097-623220:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:623651-623805:1:exon

PSMA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PSMA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome subunit alpha type-4 isoform X3
translation: MSSGNDCQPQTLTKPTFAESADEYVLKITNSEDSQEPDLIEAQTQAMMFLSAEGFPSATPYLTKDGNIMSLESAGTRLGSKKYMVRLLTYLPGTPVAKITTNAQILYEIGRLAASLDKVLLEKFQHPSVKSLHRGQFIWNLANVPLLDQYIYALGQNKYCAVVEQVIEQFKDKVIPKLSSFRACINHGDLNDHNILVDSSSASLENPQYRVSGILDFSDMSYGPGALCPRRVPGTMSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKTALALAIKVLNKTMDVSKLSAEKVEIATLTRENGKTVIRVLKQKEVEQLIKQHEEEEAKAEREKKEKEQKEKDK
SIO_010081: PSMA4
subclass of: SO_0000673
so part of: PSMA4
location: join(613900..613951,614060..614230,614931..615073,616914..617097,617737..617854,619009..619048,619207..619249,620012..620174,621494..621571,621795..621883,622744..622874,623097..623220,623651..623805)
location: region:613900-623805:1
so has part: feature:613900-613951:1:exon
so has part: feature:614060-614230:1:exon
so has part: feature:614931-615073:1:exon
so has part: feature:616914-617097:1:exon
so has part: feature:617737-617854:1:exon
so has part: feature:619009-619048:1:exon
so has part: feature:619207-619249:1:exon
so has part: feature:620012-620174:1:exon
so has part: feature:621494-621571:1:exon
so has part: feature:621795-621883:1:exon
so has part: feature:622744-622874:1:exon
so has part: feature:623097-623220:1:exon
so has part: feature:623651-623805:1:exon

XP_021402464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:613900-613951:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:614060-614230:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:614931-615073:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:616914-617097:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617737-617854:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:619009-619048:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:619207-619249:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:620012-620174:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:621494-621571:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:621795-621883:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:622744-622874:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:623097-623220:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:623651-623805:1:exon

PSMA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PSMA4
product: proteasome 20S subunit alpha 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 34 ESTs, 32 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_021546790.1
SIO_010081: PSMA4
subclass of: SO_0000673
so part of: PSMA4
location: join(618570..618721,619009..619048,619207..619249,620012..620174,621494..621571,621795..621883,622744..622874,623097..623220,623651..627125)
location: region:618570-627125:1
so has part: feature:618570-618721:1:exon
so has part: feature:619009-619048:1:exon
so has part: feature:619207-619249:1:exon
so has part: feature:620012-620174:1:exon
so has part: feature:621494-621571:1:exon
so has part: feature:621795-621883:1:exon
so has part: feature:622744-622874:1:exon
so has part: feature:623097-623220:1:exon
so has part: feature:623651-627125:1:exon

position:618570:1
position: 618570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618570-618721:1:exon

position:618721:1
position: 618721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:619009-619048:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:619207-619249:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:620012-620174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621494-621571:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:621795-621883:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:622744-622874:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:623097-623220:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:623651-627125:1:exon

PSMA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PSMA4
product: proteasome 20S subunit alpha 4, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 34 ESTs, 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021546792.1
SIO_010081: PSMA4
subclass of: SO_0000673
so part of: PSMA4
location: join(618590..618627,619009..619048,619207..619249,620012..620174,621494..621571,621795..621883,622744..622874,623097..623220,623651..627125)
location: region:618590-627125:1
so has part: feature:618590-618627:1:exon
so has part: feature:619009-619048:1:exon
so has part: feature:619207-619249:1:exon
so has part: feature:620012-620174:1:exon
so has part: feature:621494-621571:1:exon
so has part: feature:621795-621883:1:exon
so has part: feature:622744-622874:1:exon
so has part: feature:623097-623220:1:exon
so has part: feature:623651-627125:1:exon

position:618590:1
position: 618590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618590-618627:1:exon

position:618627:1
position: 618627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:619009-619048:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:619207-619249:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:620012-620174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621494-621571:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:621795-621883:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:622744-622874:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:623097-623220:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:623651-627125:1:exon

PSMA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PSMA4
product: proteasome 20S subunit alpha 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 34 ESTs, 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021546791.1
SIO_010081: PSMA4
subclass of: SO_0000673
so part of: PSMA4
location: join(618832..618858,619009..619048,619207..619249,620012..620174,621494..621571,621795..621883,622744..622874,623097..623220,623651..627125)
location: region:618832-627125:1
so has part: feature:618832-618858:1:exon
so has part: feature:619009-619048:1:exon
so has part: feature:619207-619249:1:exon
so has part: feature:620012-620174:1:exon
so has part: feature:621494-621571:1:exon
so has part: feature:621795-621883:1:exon
so has part: feature:622744-622874:1:exon
so has part: feature:623097-623220:1:exon
so has part: feature:623651-627125:1:exon

position:618832:1
position: 618832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618832-618858:1:exon

position:618858:1
position: 618858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:619009-619048:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:619207-619249:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:620012-620174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621494-621571:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:621795-621883:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:622744-622874:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:623097-623220:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:623651-627125:1:exon

PSMA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PSMA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome subunit alpha type-4 isoform X4
translation: MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKTALALAIKVLNKTMDVSKLSAEKVEIATLTRENGKTVIRVLKQKEVEQLIKQHEEEEAKAEREKKEKEQKEKDK
SIO_010081: PSMA4
subclass of: SO_0000673
so part of: PSMA4
location: join(619046..619048,619207..619249,620012..620174,621494..621571,621795..621883,622744..622874,623097..623220,623651..623805)
location: region:619046-623805:1
so has part: feature:619046-619048:1:exon
so has part: feature:619207-619249:1:exon
so has part: feature:620012-620174:1:exon
so has part: feature:621494-621571:1:exon
so has part: feature:621795-621883:1:exon
so has part: feature:622744-622874:1:exon
so has part: feature:623097-623220:1:exon
so has part: feature:623651-623805:1:exon

XP_021402465.1
type: Protein
SIO_000068: ncbiprotein

position:619046:1
position: 619046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:619046-619048:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:619207-619249:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:620012-620174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:621494-621571:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621795-621883:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:622744-622874:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:623097-623220:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:623651-623805:1:exon

PSMA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PSMA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome subunit alpha type-4 isoform X4
translation: MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKTALALAIKVLNKTMDVSKLSAEKVEIATLTRENGKTVIRVLKQKEVEQLIKQHEEEEAKAEREKKEKEQKEKDK
SIO_010081: PSMA4
subclass of: SO_0000673
so part of: PSMA4
location: join(619046..619048,619207..619249,620012..620174,621494..621571,621795..621883,622744..622874,623097..623220,623651..623805)
location: region:619046-623805:1
so has part: feature:619046-619048:1:exon
so has part: feature:619207-619249:1:exon
so has part: feature:620012-620174:1:exon
so has part: feature:621494-621571:1:exon
so has part: feature:621795-621883:1:exon
so has part: feature:622744-622874:1:exon
so has part: feature:623097-623220:1:exon
so has part: feature:623651-623805:1:exon

XP_021402466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:619046-619048:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:619207-619249:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:620012-620174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:621494-621571:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621795-621883:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:622744-622874:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:623097-623220:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:623651-623805:1:exon

PSMA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PSMA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome subunit alpha type-4 isoform X4
translation: MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKTALALAIKVLNKTMDVSKLSAEKVEIATLTRENGKTVIRVLKQKEVEQLIKQHEEEEAKAEREKKEKEQKEKDK
SIO_010081: PSMA4
subclass of: SO_0000673
so part of: PSMA4
location: join(619046..619048,619207..619249,620012..620174,621494..621571,621795..621883,622744..622874,623097..623220,623651..623805)
location: region:619046-623805:1
so has part: feature:619046-619048:1:exon
so has part: feature:619207-619249:1:exon
so has part: feature:620012-620174:1:exon
so has part: feature:621494-621571:1:exon
so has part: feature:621795-621883:1:exon
so has part: feature:622744-622874:1:exon
so has part: feature:623097-623220:1:exon
so has part: feature:623651-623805:1:exon

XP_021402467.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:619046-619048:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:619207-619249:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:620012-620174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:621494-621571:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621795-621883:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:622744-622874:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:623097-623220:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:623651-623805:1:exon

CHRNA5
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: CHRNA5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 629874..646526
location: region:629874-646526:1
so has part: feature:629874-646526:1:exon
subclass of: SO_0000010

110479454
type: Gene
SIO_000068: ncbigene

position:629874:1
position: 629874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646526:1
position: 646526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:629874-646526:1:exon

CHRNA5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: CHRNA5
product: cholinergic receptor nicotinic alpha 5 subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021546795.2
SIO_010081: CHRNA5
subclass of: SO_0000673
so part of: CHRNA5
location: join(629874..630034,637978..638129,638418..638462,640229..640338,641285..642116,644077..646526)
location: region:629874-646526:1
so has part: feature:629874-630034:1:exon
so has part: feature:637978-638129:1:exon
so has part: feature:638418-638462:1:exon
so has part: feature:640229-640338:1:exon
so has part: feature:641285-642116:1:exon
so has part: feature:644077-646526:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:629874-630034:1:exon

position:630034:1
position: 630034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:637978-638129:1:exon

position:637978:1
position: 637978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638129:1
position: 638129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:638418-638462:1:exon

position:638418:1
position: 638418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638462:1
position: 638462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:640229-640338:1:exon

position:640229:1
position: 640229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640338:1
position: 640338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:641285-642116:1:exon

position:641285:1
position: 641285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:642116:1
position: 642116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:644077-646526:1:exon

position:644077:1
position: 644077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHRNA5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: CHRNA5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal acetylcholine receptor subunit alpha-5 isoform X1
translation: MAERGAPPSCGVPPPLLLLTWLCAPLLGQPGASHEAVSEPSFIAKSEDRLFKHLFEDYQRWVRPVEHLNDTIKIKFGLAISQLVDVDEKNQLMTTNVWLKQEWIDVKLRWNPEDYAGITSIRVPSDSIWIPDIVLYDNADGRFEGTSTKTVVKYDGTIAWTPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDLILEDYDVDKRDFFDNGEWEIVTAKGSKGNRTDGCCWYPFVTYSFIIRRLPLFYTLFLIIPCIGLSFLTVLVFYLPSNEGEKISLCTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLVFTMIFVTLSIVITVFAINIHHRSSSTHNAMAPWVRKIFLHKLPKLLCMRSHVDRYFAQKEETANMNGSESSRNTLEAALDSIRYITRHVMKENEVREVVEDWKYIAQVLDRMFLWAFLLVSIIGSLVLFIPVIHKWASIIVPTHIGSTNA
SIO_010081: CHRNA5
subclass of: SO_0000673
so part of: CHRNA5
location: join(629929..630034,637978..638129,638418..638462,640229..640338,641285..642116,644077..644238)
location: region:629929-644238:1
so has part: feature:629929-630034:1:exon
so has part: feature:637978-638129:1:exon
so has part: feature:638418-638462:1:exon
so has part: feature:640229-640338:1:exon
so has part: feature:641285-642116:1:exon
so has part: feature:644077-644238:1:exon

XP_021402470.1
type: Protein
SIO_000068: ncbiprotein

position:629929:1
position: 629929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644238:1
position: 644238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:629929-630034:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:637978-638129:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:638418-638462:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:640229-640338:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:641285-642116:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:644077-644238:1:exon

CHRNA5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: CHRNA5
product: cholinergic receptor nicotinic alpha 5 subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 39 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031505762.1
SIO_010081: CHRNA5
subclass of: SO_0000673
so part of: CHRNA5
location: join(632040..632177,637978..638129,638418..638462,640229..640338,641285..642116,644077..646526)
location: region:632040-646526:1
so has part: feature:632040-632177:1:exon
so has part: feature:637978-638129:1:exon
so has part: feature:638418-638462:1:exon
so has part: feature:640229-640338:1:exon
so has part: feature:641285-642116:1:exon
so has part: feature:644077-646526:1:exon

position:632040:1
position: 632040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:632040-632177:1:exon

position:632177:1
position: 632177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:637978-638129:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:638418-638462:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:640229-640338:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:641285-642116:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:644077-646526:1:exon

CHRNA5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: CHRNA5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal acetylcholine receptor subunit alpha-5 isoform X2
translation: MFLIQELISLSCRIVWSSVSKTGMELNGQNTPEAEAVSEPSFIAKSEDRLFKHLFEDYQRWVRPVEHLNDTIKIKFGLAISQLVDVDEKNQLMTTNVWLKQEWIDVKLRWNPEDYAGITSIRVPSDSIWIPDIVLYDNADGRFEGTSTKTVVKYDGTIAWTPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDLILEDYDVDKRDFFDNGEWEIVTAKGSKGNRTDGCCWYPFVTYSFIIRRLPLFYTLFLIIPCIGLSFLTVLVFYLPSNEGEKISLCTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLVFTMIFVTLSIVITVFAINIHHRSSSTHNAMAPWVRKIFLHKLPKLLCMRSHVDRYFAQKEETANMNGSESSRNTLEAALDSIRYITRHVMKENEVREVVEDWKYIAQVLDRMFLWAFLLVSIIGSLVLFIPVIHKWASIIVPTHIGSTNA
SIO_010081: CHRNA5
subclass of: SO_0000673
so part of: CHRNA5
location: join(632072..632177,637978..638129,638418..638462,640229..640338,641285..642116,644077..644238)
location: region:632072-644238:1
so has part: feature:632072-632177:1:exon
so has part: feature:637978-638129:1:exon
so has part: feature:638418-638462:1:exon
so has part: feature:640229-640338:1:exon
so has part: feature:641285-642116:1:exon
so has part: feature:644077-644238:1:exon

XP_031361622.1
type: Protein
SIO_000068: ncbiprotein

position:632072:1
position: 632072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:632072-632177:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:637978-638129:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:638418-638462:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:640229-640338:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:641285-642116:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:644077-644238:1:exon

CHRNA3
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: CHRNA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(646553..655141)
location: region:646553-655141:-1
so has part: feature:646553-655141:-1:exon
subclass of: SO_0000010

110479453
type: Gene
SIO_000068: ncbigene

position:646553:-1
position: 646553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:655141:-1
position: 655141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:646553-655141:-1:exon

CHRNA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: CHRNA3
product: cholinergic receptor nicotinic alpha 3 subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021546794.2
SIO_010081: CHRNA3
subclass of: SO_0000673
so part of: CHRNA3
location: complement(join(646553..647710,649124..650135,651225..651334,652651..652695,652763..652902,654804..655141))
location: region:646553-655141:-1
so has part: feature:654804-655141:-1:exon
so has part: feature:652763-652902:-1:exon
so has part: feature:652651-652695:-1:exon
so has part: feature:651225-651334:-1:exon
so has part: feature:649124-650135:-1:exon
so has part: feature:646553-647710:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:654804-655141:-1:exon

position:654804:-1
position: 654804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:652763-652902:-1:exon

position:652763:-1
position: 652763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:652902:-1
position: 652902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:652651-652695:-1:exon

position:652651:-1
position: 652651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:652695:-1
position: 652695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:651225-651334:-1:exon

position:651225:-1
position: 651225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:651334:-1
position: 651334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:649124-650135:-1:exon

position:649124:-1
position: 649124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:650135:-1
position: 650135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:646553-647710:-1:exon

position:647710:-1
position: 647710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHRNA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: CHRNA3
product: cholinergic receptor nicotinic alpha 3 subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021546793.2
SIO_010081: CHRNA3
subclass of: SO_0000673
so part of: CHRNA3
location: complement(join(646553..647710,649124..650135,651225..651334,652651..652695,652763..653199))
location: region:646553-653199:-1
so has part: feature:652763-653199:-1:exon
so has part: feature:652651-652695:-1:exon
so has part: feature:651225-651334:-1:exon
so has part: feature:649124-650135:-1:exon
so has part: feature:646553-647710:-1:exon

position:653199:-1
position: 653199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:652763-653199:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:652651-652695:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:651225-651334:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:649124-650135:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:646553-647710:-1:exon

CHRNA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: CHRNA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal acetylcholine receptor subunit alpha-3 isoform X2
translation: MESPNTLLLTAAVCFLCQGCGGSEAEHRLYAALFKSYNQFVRPVKNVSDPVIIQFEVSMSQLVKVDEVNQIMETNLWLKHIWNDYKLRWNPADYGGAEFIRVPSGQIWKPDIVLYNNAVGDFQVDDKTKALLKYTGDVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVLIGSTMNLKDYWESGEWAIIKAPGYKHDIKYNCCEEIYPDITYSLYIRRLPLFYTINMIIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHYRTPKTHTMPVWVRTIFLNLLPRIMFMTRPASDEENNQKPKPLFTSEFSNLNCTNGSETKCCKDGFACQDMACSCCQYQRTKFSDFSGNLTRSSSSESVDPMLSFSVLSPEMRDAIESVKYIAENMKMQNEAKEIQDDWKYVAMVIDRIFLWVFILVCILGTAGLFLQPLMAGDEM
SIO_010081: CHRNA3
subclass of: SO_0000673
so part of: CHRNA3
location: complement(join(647582..647710,649124..650135,651225..651334,652651..652695,652763..652902,654804..654858))
location: region:647582-654858:-1
so has part: feature:654804-654858:-1:exon
so has part: feature:652763-652902:-1:exon
so has part: feature:652651-652695:-1:exon
so has part: feature:651225-651334:-1:exon
so has part: feature:649124-650135:-1:exon
so has part: feature:647582-647710:-1:exon

XP_021402469.1
type: Protein
SIO_000068: ncbiprotein

position:647582:-1
position: 647582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654858:-1
position: 654858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:654804-654858:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:652763-652902:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:652651-652695:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:651225-651334:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:649124-650135:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:647582-647710:-1:exon

CHRNA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: CHRNA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal acetylcholine receptor subunit alpha-3 isoform X1
translation: MLSSPGGTGTALPRTGLARSSPLPSTGCGGSEAEHRLYAALFKSYNQFVRPVKNVSDPVIIQFEVSMSQLVKVDEVNQIMETNLWLKHIWNDYKLRWNPADYGGAEFIRVPSGQIWKPDIVLYNNAVGDFQVDDKTKALLKYTGDVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVLIGSTMNLKDYWESGEWAIIKAPGYKHDIKYNCCEEIYPDITYSLYIRRLPLFYTINMIIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHYRTPKTHTMPVWVRTIFLNLLPRIMFMTRPASDEENNQKPKPLFTSEFSNLNCTNGSETKCCKDGFACQDMACSCCQYQRTKFSDFSGNLTRSSSSESVDPMLSFSVLSPEMRDAIESVKYIAENMKMQNEAKEIQDDWKYVAMVIDRIFLWVFILVCILGTAGLFLQPLMAGDEM
SIO_010081: CHRNA3
subclass of: SO_0000673
so part of: CHRNA3
location: complement(join(647582..647710,649124..650135,651225..651334,652651..652695,652763..652981))
location: region:647582-652981:-1
so has part: feature:652763-652981:-1:exon
so has part: feature:652651-652695:-1:exon
so has part: feature:651225-651334:-1:exon
so has part: feature:649124-650135:-1:exon
so has part: feature:647582-647710:-1:exon

XP_021402468.1
type: Protein
SIO_000068: ncbiprotein

position:652981:-1
position: 652981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:652763-652981:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:652651-652695:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:651225-651334:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:649124-650135:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647582-647710:-1:exon

CHRNB4
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: CHRNB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(660271..672947)
location: region:660271-672947:-1
so has part: feature:660271-672947:-1:exon
subclass of: SO_0000010

110479455
type: Gene
SIO_000068: ncbigene

position:660271:-1
position: 660271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:672947:-1
position: 672947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660271-672947:-1:exon

CHRNB4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: CHRNB4
product: cholinergic receptor nicotinic beta 4 subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 50 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021546798.2
SIO_010081: CHRNB4
subclass of: SO_0000673
so part of: CHRNB4
location: complement(join(660271..660411,662441..663413,665898..666007,666133..666177,667943..668088,672645..672947))
location: region:660271-672947:-1
so has part: feature:672645-672947:-1:exon
so has part: feature:667943-668088:-1:exon
so has part: feature:666133-666177:-1:exon
so has part: feature:665898-666007:-1:exon
so has part: feature:662441-663413:-1:exon
so has part: feature:660271-660411:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:672645-672947:-1:exon

position:672645:-1
position: 672645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:667943-668088:-1:exon

position:667943:-1
position: 667943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668088:-1
position: 668088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:666133-666177:-1:exon

position:666133:-1
position: 666133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666177:-1
position: 666177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:665898-666007:-1:exon

position:665898:-1
position: 665898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666007:-1
position: 666007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:662441-663413:-1:exon

position:662441:-1
position: 662441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663413:-1
position: 663413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:660271-660411:-1:exon

position:660411:-1
position: 660411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHRNB4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: CHRNB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal acetylcholine receptor subunit beta-4
translation: MPANRAYCQLSKLKNSNPHLLTAMRKMYTLVLFVVGSFCLNGSMAADAEEKLMNHLLSPDRYNKLIRPAVNSSQLVSIELQVSLAQLISVNEREQIMTTNVWLNQEWIDYRLAWKPSDYEGINKLRIPAKHIWLPDIVLYNNADGTYEVSLYTNAIVKNNGSILWLPPAIYKSACKIEVKHFPFDQQNCTLKFRSWTYDHTEIDMVLKTSMASMDDFTPSGEWDIVALPGRRTVNPLDPNYVDVTYDFIIKRKPLFYTINLIIPCVLITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLIGKYLMFTMVLVTFSIVTSVCVLNVHHRSPSTHTMPPWVKLVFLERLPAYLFMKRPENNSPRQKPCKCKKTKAENPCMEPSDFYKNSTYFLNTASAKRYDMKVSETPDNVSSHRDFRLRTGAKFSPEVQEAIDGVSFIAEHMKSDDNDQSVIEDWKYVAMVVDRLFLWIFVLVCVLGTVGLFLQPLFQNHTAAINP
SIO_010081: CHRNB4
subclass of: SO_0000673
so part of: CHRNB4
location: complement(join(660271..660411,662441..663413,665898..666007,666133..666177,667943..668088,672645..672768))
location: region:660271-672768:-1
so has part: feature:672645-672768:-1:exon
so has part: feature:667943-668088:-1:exon
so has part: feature:666133-666177:-1:exon
so has part: feature:665898-666007:-1:exon
so has part: feature:662441-663413:-1:exon
so has part: feature:660271-660411:-1:exon

XP_021402473.1
type: Protein
SIO_000068: ncbiprotein

position:672768:-1
position: 672768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:672645-672768:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:667943-668088:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:666133-666177:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:665898-666007:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:662441-663413:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:660271-660411:-1:exon

UBE2Q2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: UBE2Q2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 750772..796193
location: region:750772-796193:1
so has part: feature:750772-796193:1:exon
subclass of: SO_0000010

110479447
type: Gene
SIO_000068: ncbigene

position:750772:1
position: 750772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:796193:1
position: 796193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:750772-796193:1:exon

UBE2Q2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: UBE2Q2
product: ubiquitin conjugating enzyme E2 Q2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 22 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021546781.2
SIO_010081: UBE2Q2
subclass of: SO_0000673
so part of: UBE2Q2
location: join(750772..751165,766209..766313,772862..772966,774586..774642,774846..774932,776665..776805,783001..783085,787826..787886,789665..789755,790077..790135,791399..791447,792308..792403,792842..792908,794620..796193)
location: region:750772-796193:1
so has part: feature:750772-751165:1:exon
so has part: feature:766209-766313:1:exon
so has part: feature:772862-772966:1:exon
so has part: feature:774586-774642:1:exon
so has part: feature:774846-774932:1:exon
so has part: feature:776665-776805:1:exon
so has part: feature:783001-783085:1:exon
so has part: feature:787826-787886:1:exon
so has part: feature:789665-789755:1:exon
so has part: feature:790077-790135:1:exon
so has part: feature:791399-791447:1:exon
so has part: feature:792308-792403:1:exon
so has part: feature:792842-792908:1:exon
so has part: feature:794620-796193:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:750772-751165:1:exon

position:751165:1
position: 751165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:766209-766313:1:exon

position:766209:1
position: 766209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:766313:1
position: 766313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:772862-772966:1:exon

position:772862:1
position: 772862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:772966:1
position: 772966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:774586-774642:1:exon

position:774586:1
position: 774586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:774642:1
position: 774642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:774846-774932:1:exon

position:774846:1
position: 774846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:774932:1
position: 774932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:776665-776805:1:exon

position:776665:1
position: 776665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:776805:1
position: 776805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:783001-783085:1:exon

position:783001:1
position: 783001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783085:1
position: 783085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:787826-787886:1:exon

position:787826:1
position: 787826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787886:1
position: 787886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:789665-789755:1:exon

position:789665:1
position: 789665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789755:1
position: 789755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:790077-790135:1:exon

position:790077:1
position: 790077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790135:1
position: 790135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:791399-791447:1:exon

position:791399:1
position: 791399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:791447:1
position: 791447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:792308-792403:1:exon

position:792308:1
position: 792308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:792403:1
position: 792403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:792842-792908:1:exon

position:792842:1
position: 792842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:792908:1
position: 792908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:794620-796193:1:exon

position:794620:1
position: 794620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBE2Q2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: UBE2Q2
product: ubiquitin conjugating enzyme E2 Q2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 22 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_021546782.2
SIO_010081: UBE2Q2
subclass of: SO_0000673
so part of: UBE2Q2
location: join(750780..751165,766209..766313,772862..772966,774586..774642,776665..776805,783001..783085,787826..787886,789665..789755,790077..790135,791399..791447,792308..792403,792842..792908,794620..796193)
location: region:750780-796193:1
so has part: feature:750780-751165:1:exon
so has part: feature:766209-766313:1:exon
so has part: feature:772862-772966:1:exon
so has part: feature:774586-774642:1:exon
so has part: feature:776665-776805:1:exon
so has part: feature:783001-783085:1:exon
so has part: feature:787826-787886:1:exon
so has part: feature:789665-789755:1:exon
so has part: feature:790077-790135:1:exon
so has part: feature:791399-791447:1:exon
so has part: feature:792308-792403:1:exon
so has part: feature:792842-792908:1:exon
so has part: feature:794620-796193:1:exon

position:750780:1
position: 750780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:750780-751165:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:766209-766313:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:772862-772966:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:774586-774642:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:776665-776805:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:783001-783085:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:787826-787886:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:789665-789755:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:790077-790135:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:791399-791447:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:792308-792403:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:792842-792908:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:794620-796193:1:exon

UBE2Q2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: UBE2Q2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 Q2 isoform X1
translation: MSVSGLKAELKFLESIFDKDHERFRIVSWKLDELHCQFVLLPPPPGSSPQPPPPLTIHCNITESYPSSSPIWFVESDDPNLTSVLERLEDIKKSNTLLLQQLKRLICDLCRLYNLPQHPDVEMLDQPLPAGQNGTTEEVTSEEEEEDDMGEISAVRYLDTENWTSVCALVKQYITLCAKSDIEDLDHYDMKEEEPVDGKKSEDEGIEKENLAILEKIRKNQRQDHLNGAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVELVNDSLYEWHVKLLKVDPDSPLHSDLQVLKEKEGVEYILLNFSFKDNFPFDPPFVRVVSPVLTGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKARVQFGANKNQYNLARAQQSYKSLVQIHEKNGWYTPPKEDG
SIO_010081: UBE2Q2
subclass of: SO_0000673
so part of: UBE2Q2
location: join(750980..751165,766209..766313,772862..772966,774586..774642,774846..774932,776665..776805,783001..783085,787826..787886,789665..789755,790077..790135,791399..791447,792308..792403,792842..792908,794620..794651)
location: region:750980-794651:1
so has part: feature:750980-751165:1:exon
so has part: feature:766209-766313:1:exon
so has part: feature:772862-772966:1:exon
so has part: feature:774586-774642:1:exon
so has part: feature:774846-774932:1:exon
so has part: feature:776665-776805:1:exon
so has part: feature:783001-783085:1:exon
so has part: feature:787826-787886:1:exon
so has part: feature:789665-789755:1:exon
so has part: feature:790077-790135:1:exon
so has part: feature:791399-791447:1:exon
so has part: feature:792308-792403:1:exon
so has part: feature:792842-792908:1:exon
so has part: feature:794620-794651:1:exon

XP_021402456.1
type: Protein
SIO_000068: ncbiprotein

position:750980:1
position: 750980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:794651:1
position: 794651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:750980-751165:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:766209-766313:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:772862-772966:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:774586-774642:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:774846-774932:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:776665-776805:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:783001-783085:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:787826-787886:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:789665-789755:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:790077-790135:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:791399-791447:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:792308-792403:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:792842-792908:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:794620-794651:1:exon

UBE2Q2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: UBE2Q2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 Q2 isoform X2
translation: MSVSGLKAELKFLESIFDKDHERFRIVSWKLDELHCQFVLLPPPPGSSPQPPPPLTIHCNITESYPSSSPIWFVESDDPNLTSVLERLEDIKKSNTLLLQQLKRLICDLCRLYNLPQHPDVEMLDQPLPAGQNGTTEEVTSEEEEEDDMGEDIEDLDHYDMKEEEPVDGKKSEDEGIEKENLAILEKIRKNQRQDHLNGAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVELVNDSLYEWHVKLLKVDPDSPLHSDLQVLKEKEGVEYILLNFSFKDNFPFDPPFVRVVSPVLTGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKARVQFGANKNQYNLARAQQSYKSLVQIHEKNGWYTPPKEDG
SIO_010081: UBE2Q2
subclass of: SO_0000673
so part of: UBE2Q2
location: join(750980..751165,766209..766313,772862..772966,774586..774642,776665..776805,783001..783085,787826..787886,789665..789755,790077..790135,791399..791447,792308..792403,792842..792908,794620..794651)
location: region:750980-794651:1
so has part: feature:750980-751165:1:exon
so has part: feature:766209-766313:1:exon
so has part: feature:772862-772966:1:exon
so has part: feature:774586-774642:1:exon
so has part: feature:776665-776805:1:exon
so has part: feature:783001-783085:1:exon
so has part: feature:787826-787886:1:exon
so has part: feature:789665-789755:1:exon
so has part: feature:790077-790135:1:exon
so has part: feature:791399-791447:1:exon
so has part: feature:792308-792403:1:exon
so has part: feature:792842-792908:1:exon
so has part: feature:794620-794651:1:exon

XP_021402457.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:750980-751165:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:766209-766313:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:772862-772966:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:774586-774642:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:776665-776805:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:783001-783085:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:787826-787886:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:789665-789755:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:790077-790135:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:791399-791447:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:792308-792403:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:792842-792908:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:794620-794651:1:exon

LOC110479448
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110479448
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 766361..770307
location: region:766361-770307:1
so has part: feature:766361-770307:1:exon
subclass of: SO_0000011

110479448
type: Gene
SIO_000068: ncbigene

position:766361:1
position: 766361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:770307:1
position: 770307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:766361-770307:1:exon

LOC110479448
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110479448
product: uncharacterized LOC110479448
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002466927.1
SIO_010081: LOC110479448
subclass of: SO_0000673
so part of: LOC110479448
location: join(766361..767733,768996..770307)
location: region:766361-770307:1
so has part: feature:766361-767733:1:exon
so has part: feature:768996-770307:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:766361-767733:1:exon

position:767733:1
position: 767733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:768996-770307:1:exon

position:768996:1
position: 768996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FBXO22
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: FBXO22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 796337..805993
location: region:796337-805993:1
so has part: feature:796337-805993:1:exon
subclass of: SO_0000010

110479449
type: Gene
SIO_000068: ncbigene

position:796337:1
position: 796337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805993:1
position: 805993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:796337-805993:1:exon

FBXO22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: FBXO22
product: F-box protein 22
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021546783.1
SIO_010081: FBXO22
subclass of: SO_0000673
so part of: FBXO22
location: join(796337..796479,796569..796701,797656..797743,798066..798161,799018..799182,800204..800369,802780..805993)
location: region:796337-805993:1
so has part: feature:796337-796479:1:exon
so has part: feature:796569-796701:1:exon
so has part: feature:797656-797743:1:exon
so has part: feature:798066-798161:1:exon
so has part: feature:799018-799182:1:exon
so has part: feature:800204-800369:1:exon
so has part: feature:802780-805993:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:796337-796479:1:exon

position:796479:1
position: 796479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:796569-796701:1:exon

position:796569:1
position: 796569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:796701:1
position: 796701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:797656-797743:1:exon

position:797656:1
position: 797656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:797743:1
position: 797743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:798066-798161:1:exon

position:798066:1
position: 798066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:798161:1
position: 798161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:799018-799182:1:exon

position:799018:1
position: 799018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:799182:1
position: 799182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:800204-800369:1:exon

position:800204:1
position: 800204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:800369:1
position: 800369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:802780-805993:1:exon

position:802780:1
position: 802780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FBXO22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: FBXO22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 22
translation: MDAAAKGGYVLANLAEVVERVLGFLPTKALLRAACVCRLWRECARRTLRTRQRIAWVSALEPGPAENHALVRALARELEKVHVLPQTVLYIADAETFSGHEECHEQKKARKRNSKETALALEKLLPKRCQVLGLVTPGIVVTPMGSSSNQPQEIEEGEAGFALLFPKIDGVKIHTFHFSKDVKNRVFDESKFAEAGLKNNPDLRVVLLFGYNSWKTGATRFFHQIVNPLNEKSIILAGGQVESFTSLTSENNQAQPGDACGVVGLAFSGPQIQSATVLLDQDVADERTAEAAMQRLKAANIPEHNTIGFMFACVGRGYRHYKTKRNMEADAFRKFFPNVPLFGFFGHGEIGCDRIVTGNFVLRECNDIKDDLLHGYTTVMTLIHLGSTKANQA
SIO_010081: FBXO22
subclass of: SO_0000673
so part of: FBXO22
location: join(796376..796479,796569..796701,797656..797743,798066..798161,799018..799182,800204..800369,802780..803209)
location: region:796376-803209:1
so has part: feature:796376-796479:1:exon
so has part: feature:796569-796701:1:exon
so has part: feature:797656-797743:1:exon
so has part: feature:798066-798161:1:exon
so has part: feature:799018-799182:1:exon
so has part: feature:800204-800369:1:exon
so has part: feature:802780-803209:1:exon

XP_021402458.1
type: Protein
SIO_000068: ncbiprotein

position:796376:1
position: 796376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:803209:1
position: 803209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:796376-796479:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:796569-796701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:797656-797743:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:798066-798161:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:799018-799182:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:800204-800369:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:802780-803209:1:exon

NRG4
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: NRG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(811505..823650)
location: region:811505-823650:-1
so has part: feature:811505-823650:-1:exon
subclass of: SO_0000010

110479450
type: Gene
SIO_000068: ncbigene

position:811505:-1
position: 811505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:823650:-1
position: 823650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:811505-823650:-1:exon

NRG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: NRG4
product: neuregulin 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021546784.2
SIO_010081: NRG4
subclass of: SO_0000673
so part of: NRG4
location: complement(join(811505..811861,811954..812033,815750..815899,823541..823650))
location: region:811505-823650:-1
so has part: feature:823541-823650:-1:exon
so has part: feature:815750-815899:-1:exon
so has part: feature:811954-812033:-1:exon
so has part: feature:811505-811861:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:823541-823650:-1:exon

position:823541:-1
position: 823541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:815750-815899:-1:exon

position:815750:-1
position: 815750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:815899:-1
position: 815899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:811954-812033:-1:exon

position:811954:-1
position: 811954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:812033:-1
position: 812033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:811505-811861:-1:exon

position:811861:-1
position: 811861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NRG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: NRG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pro-neuregulin-4, membrane-bound isoform
translation: MIPTVSSPFCRCIENYTGARCEEVLLPSIKSQTKGDLFAAFLASLLLLGVLAIGAFYFLCRKVSIPRTNSSEYGANLVETTSSNGCNKITTA
SIO_010081: NRG4
subclass of: SO_0000673
so part of: NRG4
location: complement(join(811845..811861,811954..812033,815750..815899,823541..823572))
location: region:811845-823572:-1
so has part: feature:823541-823572:-1:exon
so has part: feature:815750-815899:-1:exon
so has part: feature:811954-812033:-1:exon
so has part: feature:811845-811861:-1:exon

XP_021402459.1
type: Protein
SIO_000068: ncbiprotein

position:811845:-1
position: 811845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:823572:-1
position: 823572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:823541-823572:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:815750-815899:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:811954-812033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:811845-811861:-1:exon

LOC110477551
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110477551
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(831189..865773)
location: region:831189-865773:-1
so has part: feature:831189-865773:-1:exon
subclass of: SO_0000011

110477551
type: Gene
SIO_000068: ncbigene

position:831189:-1
position: 831189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:865773:-1
position: 865773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:831189-865773:-1:exon

LOC110477551
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110477551
product: uncharacterized LOC110477551
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002466606.2
SIO_010081: LOC110477551
subclass of: SO_0000673
so part of: LOC110477551
location: complement(join(831189..831431,835349..835404,836371..836544,865538..865773))
location: region:831189-865773:-1
so has part: feature:865538-865773:-1:exon
so has part: feature:836371-836544:-1:exon
so has part: feature:835349-835404:-1:exon
so has part: feature:831189-831431:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:865538-865773:-1:exon

position:865538:-1
position: 865538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:836371-836544:-1:exon

position:836371:-1
position: 836371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:836544:-1
position: 836544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:835349-835404:-1:exon

position:835349:-1
position: 835349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:835404:-1
position: 835404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:831189-831431:-1:exon

position:831431:-1
position: 831431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM266
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TMEM266
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 841191..925486
location: region:841191-925486:1
so has part: feature:841191-925486:1:exon
subclass of: SO_0000010

110477550
type: Gene
SIO_000068: ncbigene

position:841191:1
position: 841191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:925486:1
position: 925486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:841191-925486:1:exon

TMEM266
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TMEM266
product: transmembrane protein 266, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031505765.1
SIO_010081: TMEM266
subclass of: SO_0000673
so part of: TMEM266
location: join(841191..841234,865560..865717,867961..868066,870094..870282,880643..880797,885222..885295,894460..894516,896247..896385,897834..897949,906997..907183,916743..916793,924458..925486)
location: region:841191-925486:1
so has part: feature:841191-841234:1:exon
so has part: feature:865560-865717:1:exon
so has part: feature:867961-868066:1:exon
so has part: feature:870094-870282:1:exon
so has part: feature:880643-880797:1:exon
so has part: feature:885222-885295:1:exon
so has part: feature:894460-894516:1:exon
so has part: feature:896247-896385:1:exon
so has part: feature:897834-897949:1:exon
so has part: feature:906997-907183:1:exon
so has part: feature:916743-916793:1:exon
so has part: feature:924458-925486:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:841191-841234:1:exon

position:841234:1
position: 841234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:865560-865717:1:exon

position:865560:1
position: 865560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865717:1
position: 865717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:867961-868066:1:exon

position:867961:1
position: 867961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868066:1
position: 868066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:870094-870282:1:exon

position:870094:1
position: 870094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:870282:1
position: 870282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:880643-880797:1:exon

position:880643:1
position: 880643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880797:1
position: 880797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:885222-885295:1:exon

position:885222:1
position: 885222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885295:1
position: 885295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:894460-894516:1:exon

position:894460:1
position: 894460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:894516:1
position: 894516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:896247-896385:1:exon

position:896247:1
position: 896247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:896385:1
position: 896385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:897834-897949:1:exon

position:897834:1
position: 897834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:897949:1
position: 897949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:906997-907183:1:exon

position:906997:1
position: 906997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:907183:1
position: 907183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:916743-916793:1:exon

position:916743:1
position: 916743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:916793:1
position: 916793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:924458-925486:1:exon

position:924458:1
position: 924458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM266
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TMEM266
product: transmembrane protein 266, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031505764.1
SIO_010081: TMEM266
subclass of: SO_0000673
so part of: TMEM266
location: join(848625..850196,865560..865717,867961..868066,870094..870282,880643..880797,885222..885295,894460..894516,896247..896385,897834..897949,906997..907183,916743..916793,924458..925486)
location: region:848625-925486:1
so has part: feature:848625-850196:1:exon
so has part: feature:865560-865717:1:exon
so has part: feature:867961-868066:1:exon
so has part: feature:870094-870282:1:exon
so has part: feature:880643-880797:1:exon
so has part: feature:885222-885295:1:exon
so has part: feature:894460-894516:1:exon
so has part: feature:896247-896385:1:exon
so has part: feature:897834-897949:1:exon
so has part: feature:906997-907183:1:exon
so has part: feature:916743-916793:1:exon
so has part: feature:924458-925486:1:exon

position:848625:1
position: 848625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:848625-850196:1:exon

position:850196:1
position: 850196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:865560-865717:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:867961-868066:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:870094-870282:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:880643-880797:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:885222-885295:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:894460-894516:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:896247-896385:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:897834-897949:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:906997-907183:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:916743-916793:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:924458-925486:1:exon

TMEM266
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TMEM266
product: transmembrane protein 266, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031505763.1
SIO_010081: TMEM266
subclass of: SO_0000673
so part of: TMEM266
location: join(863413..865717,867961..868066,870094..870282,880643..880797,885222..885295,894460..894516,896247..896385,897834..897949,906997..907183,916743..916793,924458..925486)
location: region:863413-925486:1
so has part: feature:863413-865717:1:exon
so has part: feature:867961-868066:1:exon
so has part: feature:870094-870282:1:exon
so has part: feature:880643-880797:1:exon
so has part: feature:885222-885295:1:exon
so has part: feature:894460-894516:1:exon
so has part: feature:896247-896385:1:exon
so has part: feature:897834-897949:1:exon
so has part: feature:906997-907183:1:exon
so has part: feature:916743-916793:1:exon
so has part: feature:924458-925486:1:exon

position:863413:1
position: 863413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:863413-865717:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:867961-868066:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:870094-870282:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:880643-880797:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:885222-885295:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:894460-894516:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:896247-896385:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:897834-897949:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:906997-907183:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:916743-916793:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:924458-925486:1:exon

TMEM266
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TMEM266
product: transmembrane protein 266, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021543404.2
SIO_010081: TMEM266
subclass of: SO_0000673
so part of: TMEM266
location: join(863413..865717,867961..868066,870094..870282,880643..880797,885222..885295,894460..894516,896247..896385,897834..897949,906997..907183,924458..925486)
location: region:863413-925486:1
so has part: feature:863413-865717:1:exon
so has part: feature:867961-868066:1:exon
so has part: feature:870094-870282:1:exon
so has part: feature:880643-880797:1:exon
so has part: feature:885222-885295:1:exon
so has part: feature:894460-894516:1:exon
so has part: feature:896247-896385:1:exon
so has part: feature:897834-897949:1:exon
so has part: feature:906997-907183:1:exon
so has part: feature:924458-925486:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:863413-865717:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:867961-868066:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:870094-870282:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:880643-880797:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:885222-885295:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:894460-894516:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:896247-896385:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:897834-897949:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:906997-907183:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:924458-925486:1:exon

TMEM266
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TMEM266
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 266 isoform X1
translation: MTNPQPTIEGSVSEVEIISQQVEEETKSIAPVQLVNFAYRDLPLAALDLSVAGSQLLPNLDEEYQREGSNWLKPCCGRRAAVWQVFLLSASLNSFLVACVVLVVILLTLELLIDIKLLQFSSASQFAGVIHWISLVILSVFFSETILRIVVLGIWDYIENKIEVFDGAIIILSLAPMVASTVANGPSSPWDAISLIITLRIWRVKRIIDAYVLPVKVEMEMMIQQYEKAKVIQDEQLERLTQICQEQGFEIRQLRAHLAQQDLDLAAEREAALQVPHVLNKQSSKRYKVVATEDSDDEATENITELRPAREDDMNNYVSRYYSEPSSDSGVPEAAIGVTTAAIDVHRPNISSELFTVDAPLRLGSTGTSASLTSGSASRSTVSSGTRGCSESSQTLGSSPDCSTACEEPRQRAAQAAVQELLSSLSQEACLAQKGLDPVNLKLPSPAGSVGASPDLGHRLSVYNRRNQDSLDVFQLKPLLDCPQGAPVIEEKYGVLGPPEPRLGRVPEA
SIO_010081: TMEM266
subclass of: SO_0000673
so part of: TMEM266
location: join(868053..868066,870094..870282,880643..880797,885222..885295,894460..894516,896247..896385,897834..897949,906997..907183,916743..916793,924458..925005)
location: region:868053-925005:1
so has part: feature:868053-868066:1:exon
so has part: feature:870094-870282:1:exon
so has part: feature:880643-880797:1:exon
so has part: feature:885222-885295:1:exon
so has part: feature:894460-894516:1:exon
so has part: feature:896247-896385:1:exon
so has part: feature:897834-897949:1:exon
so has part: feature:906997-907183:1:exon
so has part: feature:916743-916793:1:exon
so has part: feature:924458-925005:1:exon

XP_031361623.1
type: Protein
SIO_000068: ncbiprotein

position:868053:1
position: 868053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:925005:1
position: 925005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:868053-868066:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:870094-870282:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:880643-880797:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:885222-885295:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:894460-894516:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:896247-896385:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:897834-897949:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:906997-907183:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:916743-916793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:924458-925005:1:exon

TMEM266
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TMEM266
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 266 isoform X1
translation: MTNPQPTIEGSVSEVEIISQQVEEETKSIAPVQLVNFAYRDLPLAALDLSVAGSQLLPNLDEEYQREGSNWLKPCCGRRAAVWQVFLLSASLNSFLVACVVLVVILLTLELLIDIKLLQFSSASQFAGVIHWISLVILSVFFSETILRIVVLGIWDYIENKIEVFDGAIIILSLAPMVASTVANGPSSPWDAISLIITLRIWRVKRIIDAYVLPVKVEMEMMIQQYEKAKVIQDEQLERLTQICQEQGFEIRQLRAHLAQQDLDLAAEREAALQVPHVLNKQSSKRYKVVATEDSDDEATENITELRPAREDDMNNYVSRYYSEPSSDSGVPEAAIGVTTAAIDVHRPNISSELFTVDAPLRLGSTGTSASLTSGSASRSTVSSGTRGCSESSQTLGSSPDCSTACEEPRQRAAQAAVQELLSSLSQEACLAQKGLDPVNLKLPSPAGSVGASPDLGHRLSVYNRRNQDSLDVFQLKPLLDCPQGAPVIEEKYGVLGPPEPRLGRVPEA
SIO_010081: TMEM266
subclass of: SO_0000673
so part of: TMEM266
location: join(868053..868066,870094..870282,880643..880797,885222..885295,894460..894516,896247..896385,897834..897949,906997..907183,916743..916793,924458..925005)
location: region:868053-925005:1
so has part: feature:868053-868066:1:exon
so has part: feature:870094-870282:1:exon
so has part: feature:880643-880797:1:exon
so has part: feature:885222-885295:1:exon
so has part: feature:894460-894516:1:exon
so has part: feature:896247-896385:1:exon
so has part: feature:897834-897949:1:exon
so has part: feature:906997-907183:1:exon
so has part: feature:916743-916793:1:exon
so has part: feature:924458-925005:1:exon

XP_031361624.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:868053-868066:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:870094-870282:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:880643-880797:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:885222-885295:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:894460-894516:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:896247-896385:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:897834-897949:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:906997-907183:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:916743-916793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:924458-925005:1:exon

TMEM266
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TMEM266
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 266 isoform X1
translation: MTNPQPTIEGSVSEVEIISQQVEEETKSIAPVQLVNFAYRDLPLAALDLSVAGSQLLPNLDEEYQREGSNWLKPCCGRRAAVWQVFLLSASLNSFLVACVVLVVILLTLELLIDIKLLQFSSASQFAGVIHWISLVILSVFFSETILRIVVLGIWDYIENKIEVFDGAIIILSLAPMVASTVANGPSSPWDAISLIITLRIWRVKRIIDAYVLPVKVEMEMMIQQYEKAKVIQDEQLERLTQICQEQGFEIRQLRAHLAQQDLDLAAEREAALQVPHVLNKQSSKRYKVVATEDSDDEATENITELRPAREDDMNNYVSRYYSEPSSDSGVPEAAIGVTTAAIDVHRPNISSELFTVDAPLRLGSTGTSASLTSGSASRSTVSSGTRGCSESSQTLGSSPDCSTACEEPRQRAAQAAVQELLSSLSQEACLAQKGLDPVNLKLPSPAGSVGASPDLGHRLSVYNRRNQDSLDVFQLKPLLDCPQGAPVIEEKYGVLGPPEPRLGRVPEA
SIO_010081: TMEM266
subclass of: SO_0000673
so part of: TMEM266
location: join(868053..868066,870094..870282,880643..880797,885222..885295,894460..894516,896247..896385,897834..897949,906997..907183,916743..916793,924458..925005)
location: region:868053-925005:1
so has part: feature:868053-868066:1:exon
so has part: feature:870094-870282:1:exon
so has part: feature:880643-880797:1:exon
so has part: feature:885222-885295:1:exon
so has part: feature:894460-894516:1:exon
so has part: feature:896247-896385:1:exon
so has part: feature:897834-897949:1:exon
so has part: feature:906997-907183:1:exon
so has part: feature:916743-916793:1:exon
so has part: feature:924458-925005:1:exon

XP_031361625.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:868053-868066:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:870094-870282:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:880643-880797:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:885222-885295:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:894460-894516:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:896247-896385:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:897834-897949:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:906997-907183:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:916743-916793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:924458-925005:1:exon

TMEM266
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TMEM266
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 266 isoform X2
translation: MTNPQPTIEGSVSEVEIISQQVEEETKSIAPVQLVNFAYRDLPLAALDLSVAGSQLLPNLDEEYQREGSNWLKPCCGRRAAVWQVFLLSASLNSFLVACVVLVVILLTLELLIDIKLLQFSSASQFAGVIHWISLVILSVFFSETILRIVVLGIWDYIENKIEVFDGAIIILSLAPMVASTVANGPSSPWDAISLIITLRIWRVKRIIDAYVLPVKVEMEMMIQQYEKAKVIQDEQLERLTQICQEQGFEIRQLRAHLAQQDLDLAAEREAALQVPHVLNKQSSKRYKVVATEDSDDEATENITELRPARDSGVPEAAIGVTTAAIDVHRPNISSELFTVDAPLRLGSTGTSASLTSGSASRSTVSSGTRGCSESSQTLGSSPDCSTACEEPRQRAAQAAVQELLSSLSQEACLAQKGLDPVNLKLPSPAGSVGASPDLGHRLSVYNRRNQDSLDVFQLKPLLDCPQGAPVIEEKYGVLGPPEPRLGRVPEA
SIO_010081: TMEM266
subclass of: SO_0000673
so part of: TMEM266
location: join(868053..868066,870094..870282,880643..880797,885222..885295,894460..894516,896247..896385,897834..897949,906997..907183,924458..925005)
location: region:868053-925005:1
so has part: feature:868053-868066:1:exon
so has part: feature:870094-870282:1:exon
so has part: feature:880643-880797:1:exon
so has part: feature:885222-885295:1:exon
so has part: feature:894460-894516:1:exon
so has part: feature:896247-896385:1:exon
so has part: feature:897834-897949:1:exon
so has part: feature:906997-907183:1:exon
so has part: feature:924458-925005:1:exon

XP_021399079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:868053-868066:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:870094-870282:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:880643-880797:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:885222-885295:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:894460-894516:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:896247-896385:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:897834-897949:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:906997-907183:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:924458-925005:1:exon

ETFA
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: ETFA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(925638..965098)
location: region:925638-965098:-1
so has part: feature:925638-965098:-1:exon
subclass of: SO_0000010

110477557
type: Gene
SIO_000068: ncbigene

position:925638:-1
position: 925638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:965098:-1
position: 965098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:925638-965098:-1:exon

ETFA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ETFA
product: electron transfer flavoprotein subunit alpha
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 51% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021543421.2
SIO_010081: ETFA
subclass of: SO_0000673
so part of: ETFA
location: complement(join(925638..925739,926573..926653,929961..930026,941767..941849,942817..942885,943690..943791,944939..945049,946253..946352,947833..947915,948023..948104,949846..949995,956575..956640,958792..958845,963337..963455,963647..963830,964421..964652,964815..965098))
location: region:925638-965098:-1
so has part: feature:964815-965098:-1:exon
so has part: feature:964421-964652:-1:exon
so has part: feature:963647-963830:-1:exon
so has part: feature:963337-963455:-1:exon
so has part: feature:958792-958845:-1:exon
so has part: feature:956575-956640:-1:exon
so has part: feature:949846-949995:-1:exon
so has part: feature:948023-948104:-1:exon
so has part: feature:947833-947915:-1:exon
so has part: feature:946253-946352:-1:exon
so has part: feature:944939-945049:-1:exon
so has part: feature:943690-943791:-1:exon
so has part: feature:942817-942885:-1:exon
so has part: feature:941767-941849:-1:exon
so has part: feature:929961-930026:-1:exon
so has part: feature:926573-926653:-1:exon
so has part: feature:925638-925739:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:964815-965098:-1:exon

position:964815:-1
position: 964815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:964421-964652:-1:exon

position:964421:-1
position: 964421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:964652:-1
position: 964652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:963647-963830:-1:exon

position:963647:-1
position: 963647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:963830:-1
position: 963830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:963337-963455:-1:exon

position:963337:-1
position: 963337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:963455:-1
position: 963455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:958792-958845:-1:exon

position:958792:-1
position: 958792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:958845:-1
position: 958845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:956575-956640:-1:exon

position:956575:-1
position: 956575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:956640:-1
position: 956640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:949846-949995:-1:exon

position:949846:-1
position: 949846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:949995:-1
position: 949995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:948023-948104:-1:exon

position:948023:-1
position: 948023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:948104:-1
position: 948104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:947833-947915:-1:exon

position:947833:-1
position: 947833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:947915:-1
position: 947915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:946253-946352:-1:exon

position:946253:-1
position: 946253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:946352:-1
position: 946352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:944939-945049:-1:exon

position:944939:-1
position: 944939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945049:-1
position: 945049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:943690-943791:-1:exon

position:943690:-1
position: 943690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:943791:-1
position: 943791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:942817-942885:-1:exon

position:942817:-1
position: 942817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942885:-1
position: 942885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:941767-941849:-1:exon

position:941767:-1
position: 941767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:941849:-1
position: 941849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:929961-930026:-1:exon

position:929961:-1
position: 929961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:930026:-1
position: 930026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:926573-926653:-1:exon

position:926573:-1
position: 926573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:926653:-1
position: 926653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:925638-925739:-1:exon

position:925739:-1
position: 925739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ETFA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ETFA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: electron transfer flavoprotein subunit alpha, mitochondrial
translation: MSARRGADLTARPPEAIGGRGERPRIGGAEQWARARSGAHAPRGPARSRTTAALTGRRPRAPRLLRALRPGRPRDPLPRPPRCASALCAQERRHRFGVPLAGARGRARRDSSGAAQRSVSAADGRGLRGGRRLDAAHPRSSSLLRPVCGRAIPTDPNRTDRIVGAAVPGSSPPGHSLYYPFEDPKCRKQALKFVQQLWGKGGWVAFEAPMSAGMHVTKGFWYLCLPLCVRRCKGLGDGNLYSTVGHHRSMPGHLADKRVQNGDFSLSQNSESWAVIRIKPVSIRICASEVLAVTLCGSSAGEPRKGGRRRLAPASVLRRSQSTLVVAEHNNESLTPITLNTITAAKCLGGEVSCLVAGTSCDKVASELSKVQGVAKVLVAQHDVYKGFLAEELTPLIVETHKKFNYTHICAGASAFGKNLIPRVAGKLDVAPVSDIIEIKSPDTFVRTIYAGNIICTVQCDEAIKVFTVRGTSFEAAPVSGGNASVEKLTPPPPVGISEWIEQKLTKSDRPELTSARVVVSGGRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFVPNDMQIGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGLVADLFQAVPEMTKLLKKK
SIO_010081: ETFA
subclass of: SO_0000673
so part of: ETFA
location: complement(join(925701..925739,926573..926653,929961..930026,941767..941849,942817..942885,943690..943791,944939..945049,946253..946352,947833..947915,948023..948104,949846..949995,956575..956640,958792..958845,963337..963455,963647..963830,964421..964652,964815..965098))
location: region:925701-965098:-1
so has part: feature:964815-965098:-1:exon
so has part: feature:964421-964652:-1:exon
so has part: feature:963647-963830:-1:exon
so has part: feature:963337-963455:-1:exon
so has part: feature:958792-958845:-1:exon
so has part: feature:956575-956640:-1:exon
so has part: feature:949846-949995:-1:exon
so has part: feature:948023-948104:-1:exon
so has part: feature:947833-947915:-1:exon
so has part: feature:946253-946352:-1:exon
so has part: feature:944939-945049:-1:exon
so has part: feature:943690-943791:-1:exon
so has part: feature:942817-942885:-1:exon
so has part: feature:941767-941849:-1:exon
so has part: feature:929961-930026:-1:exon
so has part: feature:926573-926653:-1:exon
so has part: feature:925701-925739:-1:exon

XP_021399096.1
type: Protein
SIO_000068: ncbiprotein

position:925701:-1
position: 925701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:964815-965098:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:964421-964652:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:963647-963830:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:963337-963455:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:958792-958845:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:956575-956640:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:949846-949995:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:948023-948104:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:947833-947915:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:946253-946352:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:944939-945049:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:943690-943791:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:942817-942885:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:941767-941849:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:929961-930026:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:926573-926653:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:925701-925739:-1:exon

ISL2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: ISL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 965224..967869
location: region:965224-967869:1
so has part: feature:965224-967869:1:exon
subclass of: SO_0000010

110477558
type: Gene
SIO_000068: ncbigene

position:965224:1
position: 965224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:967869:1
position: 967869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:965224-967869:1:exon

ISL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ISL2
product: ISL LIM homeobox 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021543422.1
SIO_010081: ISL2
subclass of: SO_0000673
so part of: ISL2
location: join(965224..965281,966316..966505,966700..966959,967070..967353,967452..967622,967753..967869)
location: region:965224-967869:1
so has part: feature:965224-965281:1:exon
so has part: feature:966316-966505:1:exon
so has part: feature:966700-966959:1:exon
so has part: feature:967070-967353:1:exon
so has part: feature:967452-967622:1:exon
so has part: feature:967753-967869:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:965224-965281:1:exon

position:965281:1
position: 965281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:966316-966505:1:exon

position:966316:1
position: 966316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:966505:1
position: 966505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:966700-966959:1:exon

position:966700:1
position: 966700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:966959:1
position: 966959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:967070-967353:1:exon

position:967070:1
position: 967070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:967353:1
position: 967353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:967452-967622:1:exon

position:967452:1
position: 967452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:967622:1
position: 967622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:967753-967869:1:exon

position:967753:1
position: 967753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ISL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ISL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin gene enhancer protein ISL-2
translation: MVDILLPRPLPGAMGEPSKRRPGLALCAGCGGRIQDPFLLRVSPDLEWHVACLKCAECGQPLDETCTCFLRDGKAYCKRDYSRLFGIKCAQCRAAFSSSDLVMRARDHVYHLECFRCAACGRQLLPGDQFCLRERDLLCRADHGSPPDGAAARGPRSPALPPAAAAHLAEPVPGRPPAPRPPAHKAAEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKKSILMKQLQQQQHSDKTSLQGLTGTPLVAGSPIRHESAVQGSAVEVQTYQPPWKALSEFALQSDLEQPAAFQQLVSFSESGSLGTSSGSDVTSLSSQLPDTPNSMVPSPAET
SIO_010081: ISL2
subclass of: SO_0000673
so part of: ISL2
location: join(965224..965281,966316..966505,966700..966959,967070..967353,967452..967622,967753..967869)
location: region:965224-967869:1
so has part: feature:965224-965281:1:exon
so has part: feature:966316-966505:1:exon
so has part: feature:966700-966959:1:exon
so has part: feature:967070-967353:1:exon
so has part: feature:967452-967622:1:exon
so has part: feature:967753-967869:1:exon

XP_021399097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:965224-965281:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:966316-966505:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:966700-966959:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:967070-967353:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:967452-967622:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:967753-967869:1:exon

SCAPER
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SCAPER
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(970066..1104754)
location: region:970066-1104754:-1
so has part: feature:970066-1104754:-1:exon
subclass of: SO_0000010

110477552
type: Gene
SIO_000068: ncbigene

position:970066:-1
position: 970066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104754:-1
position: 1104754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:970066-1104754:-1:exon

SCAPER
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SCAPER
product: S-phase cyclin A associated protein in the ER, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021543407.2
SIO_010081: SCAPER
subclass of: SO_0000673
so part of: SCAPER
location: complement(join(970066..970492,972068..972119,974606..974797,989816..989965,992936..993173,1002067..1002222,1005868..1006097,1012271..1012394,1019327..1019442,1035818..1035944,1045364..1045429,1048544..1048680,1061982..1062089,1063252..1063404,1063519..1063600,1067060..1067202,1067344..1067499,1069449..1069589,1070049..1070160,1070483..1070600,1071034..1071109,1071565..1071735,1072954..1073052,1073581..1073843,1079919..1080079,1081971..1082087,1082519..1082619,1090498..1090695,1094330..1094400,1100303..1100420,1102844..1102919,1104709..1104754))
location: region:970066-1104754:-1
so has part: feature:1104709-1104754:-1:exon
so has part: feature:1102844-1102919:-1:exon
so has part: feature:1100303-1100420:-1:exon
so has part: feature:1094330-1094400:-1:exon
so has part: feature:1090498-1090695:-1:exon
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so has part: feature:1081971-1082087:-1:exon
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so has part: feature:1072954-1073052:-1:exon
so has part: feature:1071565-1071735:-1:exon
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so has part: feature:1070483-1070600:-1:exon
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so has part: feature:1069449-1069589:-1:exon
so has part: feature:1067344-1067499:-1:exon
so has part: feature:1067060-1067202:-1:exon
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so has part: feature:1061982-1062089:-1:exon
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so has part: feature:1035818-1035944:-1:exon
so has part: feature:1019327-1019442:-1:exon
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so has part: feature:992936-993173:-1:exon
so has part: feature:989816-989965:-1:exon
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so has part: feature:972068-972119:-1:exon
so has part: feature:970066-970492:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1104709-1104754:-1:exon

position:1104709:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1102844-1102919:-1:exon

position:1102844:-1
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type: ReverseStrandPosition
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position:1102919:-1
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reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:1100303-1100420:-1:exon

position:1100303:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1100420:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1094330-1094400:-1:exon

position:1094330:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1094400:-1
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type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1090498-1090695:-1:exon

position:1090498:-1
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reference: sequence
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position:1090695:-1
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urn:…
SIO_000300: 6
SIO_000628: feature:1082519-1082619:-1:exon

position:1082519:-1
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reference: sequence
type: ReverseStrandPosition
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position:1082619:-1
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reference: sequence
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urn:…
SIO_000300: 7
SIO_000628: feature:1081971-1082087:-1:exon

position:1081971:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1082087:-1
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reference: sequence
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urn:…
SIO_000300: 8
SIO_000628: feature:1079919-1080079:-1:exon

position:1079919:-1
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reference: sequence
type: ReverseStrandPosition
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position:1080079:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 9
SIO_000628: feature:1073581-1073843:-1:exon

position:1073581:-1
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reference: sequence
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position:1073843:-1
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urn:…
SIO_000300: 10
SIO_000628: feature:1072954-1073052:-1:exon

position:1072954:-1
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reference: sequence
type: ReverseStrandPosition
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position:1073052:-1
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reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:1071565-1071735:-1:exon

position:1071565:-1
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reference: sequence
type: ReverseStrandPosition
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position:1071735:-1
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urn:…
SIO_000300: 12
SIO_000628: feature:1071034-1071109:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:1071109:-1
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urn:…
SIO_000300: 13
SIO_000628: feature:1070483-1070600:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:1070600:-1
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urn:…
SIO_000300: 14
SIO_000628: feature:1070049-1070160:-1:exon

position:1070049:-1
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reference: sequence
type: ReverseStrandPosition
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position:1070160:-1
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reference: sequence
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urn:…
SIO_000300: 15
SIO_000628: feature:1069449-1069589:-1:exon

position:1069449:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1069589:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 16
SIO_000628: feature:1067344-1067499:-1:exon

position:1067344:-1
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reference: sequence
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position:1067499:-1
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reference: sequence
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urn:…
SIO_000300: 17
SIO_000628: feature:1067060-1067202:-1:exon

position:1067060:-1
position: 1067060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067202:-1
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reference: sequence
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type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1063519-1063600:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:1063600:-1
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reference: sequence
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type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1063252-1063404:-1:exon

position:1063252:-1
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reference: sequence
type: ReverseStrandPosition
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position:1063404:-1
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urn:…
SIO_000300: 20
SIO_000628: feature:1061982-1062089:-1:exon

position:1061982:-1
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reference: sequence
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position:1062089:-1
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reference: sequence
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urn:…
SIO_000300: 21
SIO_000628: feature:1048544-1048680:-1:exon

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position:1048680:-1
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urn:…
SIO_000300: 22
SIO_000628: feature:1045364-1045429:-1:exon

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urn:…
SIO_000300: 23
SIO_000628: feature:1035818-1035944:-1:exon

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urn:…
SIO_000300: 24
SIO_000628: feature:1019327-1019442:-1:exon

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urn:…
SIO_000300: 25
SIO_000628: feature:1012271-1012394:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:1012394:-1
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reference: sequence
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urn:…
SIO_000300: 26
SIO_000628: feature:1005868-1006097:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 27
SIO_000628: feature:1002067-1002222:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 28
SIO_000628: feature:992936-993173:-1:exon

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reference: sequence
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position:993173:-1
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urn:…
SIO_000300: 29
SIO_000628: feature:989816-989965:-1:exon

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reference: sequence
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position:989965:-1
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reference: sequence
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urn:…
SIO_000300: 30
SIO_000628: feature:974606-974797:-1:exon

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reference: sequence
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position:974797:-1
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reference: sequence
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urn:…
SIO_000300: 31
SIO_000628: feature:972068-972119:-1:exon

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reference: sequence
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position:972119:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:970066-970492:-1:exon

position:970492:-1
position: 970492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SCAPER
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SCAPER
product: S-phase cyclin A associated protein in the ER, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021543406.2
SIO_010081: SCAPER
subclass of: SO_0000673
so part of: SCAPER
location: complement(join(970066..970492,972068..972119,974606..974797,989816..989965,992936..993173,1002067..1002222,1005868..1006097,1012271..1012394,1019327..1019442,1035818..1035944,1045364..1045429,1048544..1048680,1061982..1062089,1063252..1063404,1063519..1063600,1067060..1067202,1067344..1067499,1069449..1069589,1070049..1070160,1070483..1070600,1071034..1071109,1071565..1071735,1072954..1073172,1073581..1073843,1079919..1080079,1081971..1082087,1082519..1082619,1090498..1090695,1094330..1094400,1100303..1100420,1102844..1102919,1104709..1104754))
location: region:970066-1104754:-1
so has part: feature:1104709-1104754:-1:exon
so has part: feature:1102844-1102919:-1:exon
so has part: feature:1100303-1100420:-1:exon
so has part: feature:1094330-1094400:-1:exon
so has part: feature:1090498-1090695:-1:exon
so has part: feature:1082519-1082619:-1:exon
so has part: feature:1081971-1082087:-1:exon
so has part: feature:1079919-1080079:-1:exon
so has part: feature:1073581-1073843:-1:exon
so has part: feature:1072954-1073172:-1:exon
so has part: feature:1071565-1071735:-1:exon
so has part: feature:1071034-1071109:-1:exon
so has part: feature:1070483-1070600:-1:exon
so has part: feature:1070049-1070160:-1:exon
so has part: feature:1069449-1069589:-1:exon
so has part: feature:1067344-1067499:-1:exon
so has part: feature:1067060-1067202:-1:exon
so has part: feature:1063519-1063600:-1:exon
so has part: feature:1063252-1063404:-1:exon
so has part: feature:1061982-1062089:-1:exon
so has part: feature:1048544-1048680:-1:exon
so has part: feature:1045364-1045429:-1:exon
so has part: feature:1035818-1035944:-1:exon
so has part: feature:1019327-1019442:-1:exon
so has part: feature:1012271-1012394:-1:exon
so has part: feature:1005868-1006097:-1:exon
so has part: feature:1002067-1002222:-1:exon
so has part: feature:992936-993173:-1:exon
so has part: feature:989816-989965:-1:exon
so has part: feature:974606-974797:-1:exon
so has part: feature:972068-972119:-1:exon
so has part: feature:970066-970492:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1104709-1104754:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1102844-1102919:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1100303-1100420:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1094330-1094400:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1090498-1090695:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1082519-1082619:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1081971-1082087:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1079919-1080079:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1073581-1073843:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1072954-1073172:-1:exon

position:1073172:-1
position: 1073172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1071565-1071735:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1071034-1071109:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1070483-1070600:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1070049-1070160:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1069449-1069589:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1067344-1067499:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1067060-1067202:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1063519-1063600:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1063252-1063404:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1061982-1062089:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1048544-1048680:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1045364-1045429:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1035818-1035944:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1019327-1019442:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1012271-1012394:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1005868-1006097:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1002067-1002222:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:992936-993173:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:989816-989965:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:974606-974797:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:972068-972119:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:970066-970492:-1:exon

SCAPER
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SCAPER
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: S phase cyclin A-associated protein in the endoplasmic reticulum isoform X2
translation: MGSSKNAVSEPVDAEEGYNMMASFQRSNSHDKVRKIVAEEGRTARNLIAWSVPLENKEDDGKSKWQSSGKTKRVTQGTLKTAKQNTALDCKLTAAGAGDKNFDKSPTKTRQPRKVDLRARYWAFLFDNLRRAVDEIYVTCESDQSVVECKEVLMMLDNYVRDFKALIDWIQLQEKLEKADAQSRPTSLAWEVKKMSPGRHVIPSPSTDRISVTSNARRSLNFGNPAVTISATRLAPSGVSWADKVKANHGSKAANPELATAQACLVPPAQKSLRKNDRKDAEGWETVQRGRPVRSRSTALAAKAPVAAETLKSRGDSDKENVISPPAENKHESSVIGSAASESTELVQKDPLHHSESPLTEKTQMNEAFPQTTGCTDWHQTEKAKSETEMDPTDISNSMAEVLAKKEELADRLEKANEEAIASAIAEEEQLTREIEAEENNDINIETDNDSDFSANMGNGNISFCGLSMDWNDVLADYEARESWRQSNSWGDRVEEEPARPPGHGIHMHEKLSSPSRKRTIAESKKKHEEKQMKAQQLREKLREEKTLKLQKLMEREKDVRKWKEELLDQRRRMMEEKLLHAEFKREVQLQAIVKKAQEEEAKVNEIAFINTLEAQNKRHDVLNKLKEYEQRLNELQEERQRRQEEKQARDEAVQERKRALEAERQARVEELLMKRKEQEARIEQQRQEKEKAREDAARERARDREERLAALTAAQQEAMEELQKKIQLKHDESIRRHMEQIEQRKEKAAELSSGRHANTDYAPKLTPYERKKQCSLCNVMISSEVYLFSHIKGKKHQQAVRENSSIQGRELSDEEVEHLSLKKYIVDIVIESSVPVEPLKDGEEKQKIKKKAKKLKARMNSRAKEYESLMEAKNAVSDSPFKAKLQRLAKDLLKHLQMQDSCSLGNHKVPGLDRTLGEISRILEKENTADKIAFRAAGGLTALENILQMVTSPTNLNAAARVPFKSLCSTVNVYSLTCSNCIENCTYVLFSNKITFLMDLLIHQFTISVPDDQNATASRSVNKQVFEGLTTGLLRVTAVIFRCLISSFPDGNNHSTALKILQEVKSKSSQVEAFSSRVQDLISYVVNTGLVDKLCCCFLSVQGPVDENPSIASFLQNATAVLHGMCQLCWAVSGRSCSVFDSARQDPTGLTAALQATDLVGVLHMLYCVLFHGTISDPNTASPKDSYAASTVQVAIQSLRFFNSFAVLDLPAFQSIVGAEGLSLAFRHIISSLLWYCSQHTCEGLLHEVIICVGYFTVNNPDNQIIVQSGRHPTVLQKLCQLPFQYFSDPRLIKVLFPSLIAACYNNPQNKIILEQEMSCVLLATFIQDFAQSSGQVENQFFQQREKFFSPQDYLELSNRFPRQSWEEARQFFLKK
SIO_010081: SCAPER
subclass of: SO_0000673
so part of: SCAPER
location: complement(join(970398..970492,972068..972119,974606..974797,989816..989965,992936..993173,1002067..1002222,1005868..1006097,1012271..1012394,1019327..1019442,1035818..1035944,1045364..1045429,1048544..1048680,1061982..1062089,1063252..1063404,1063519..1063600,1067060..1067202,1067344..1067499,1069449..1069589,1070049..1070160,1070483..1070600,1071034..1071109,1071565..1071735,1072954..1073052,1073581..1073843,1079919..1080079,1081971..1082087,1082519..1082619,1090498..1090695,1094330..1094400,1100303..1100420,1102844..1102906))
location: region:970398-1102906:-1
so has part: feature:1102844-1102906:-1:exon
so has part: feature:1100303-1100420:-1:exon
so has part: feature:1094330-1094400:-1:exon
so has part: feature:1090498-1090695:-1:exon
so has part: feature:1082519-1082619:-1:exon
so has part: feature:1081971-1082087:-1:exon
so has part: feature:1079919-1080079:-1:exon
so has part: feature:1073581-1073843:-1:exon
so has part: feature:1072954-1073052:-1:exon
so has part: feature:1071565-1071735:-1:exon
so has part: feature:1071034-1071109:-1:exon
so has part: feature:1070483-1070600:-1:exon
so has part: feature:1070049-1070160:-1:exon
so has part: feature:1069449-1069589:-1:exon
so has part: feature:1067344-1067499:-1:exon
so has part: feature:1067060-1067202:-1:exon
so has part: feature:1063519-1063600:-1:exon
so has part: feature:1063252-1063404:-1:exon
so has part: feature:1061982-1062089:-1:exon
so has part: feature:1048544-1048680:-1:exon
so has part: feature:1045364-1045429:-1:exon
so has part: feature:1035818-1035944:-1:exon
so has part: feature:1019327-1019442:-1:exon
so has part: feature:1012271-1012394:-1:exon
so has part: feature:1005868-1006097:-1:exon
so has part: feature:1002067-1002222:-1:exon
so has part: feature:992936-993173:-1:exon
so has part: feature:989816-989965:-1:exon
so has part: feature:974606-974797:-1:exon
so has part: feature:972068-972119:-1:exon
so has part: feature:970398-970492:-1:exon

XP_021399082.1
type: Protein
SIO_000068: ncbiprotein

position:970398:-1
position: 970398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1102906:-1
position: 1102906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1102844-1102906:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1100303-1100420:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1094330-1094400:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1090498-1090695:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1082519-1082619:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1081971-1082087:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1079919-1080079:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1073581-1073843:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1072954-1073052:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1071565-1071735:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1071034-1071109:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1070483-1070600:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1070049-1070160:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1069449-1069589:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1067344-1067499:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1067060-1067202:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1063519-1063600:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1063252-1063404:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1061982-1062089:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1048544-1048680:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1045364-1045429:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1035818-1035944:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1019327-1019442:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1012271-1012394:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1005868-1006097:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1002067-1002222:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:992936-993173:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:989816-989965:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:974606-974797:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:972068-972119:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:970398-970492:-1:exon

SCAPER
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SCAPER
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: S phase cyclin A-associated protein in the endoplasmic reticulum isoform X1
translation: MGSSKNAVSEPVDAEEGYNMMASFQRSNSHDKVRKIVAEEGRTARNLIAWSVPLENKEDDGKSKWQSSGKTKRVTQGTLKTAKQNTALDCKLTAAGAGDKNFDKSPTKTRQPRKVDLRARYWAFLFDNLRRAVDEIYVTCESDQSVVECKEVLMMLDNYVRDFKALIDWIQLQEKLEKADAQSRPTSLAWEVKKMSPGRHVIPSPSTDRISVTSNARRSLNFGNPAVTISATRLAPSGVSWADKVKANHGSKAANPELATAQACLVPPAQKSLRKNDRKDAEGWETVQRGRPVRSRSTALAAKAPVAAETLKSRGDSDKENVISPPAENKHESSVIGSAASESTELVQKDPLHHSESPLTEKTQFPASEANGSTGTALQGDFLEPAPEIPPVLTSTDCSSKTLQMNEAFPQTTGCTDWHQTEKAKSETEMDPTDISNSMAEVLAKKEELADRLEKANEEAIASAIAEEEQLTREIEAEENNDINIETDNDSDFSANMGNGNISFCGLSMDWNDVLADYEARESWRQSNSWGDRVEEEPARPPGHGIHMHEKLSSPSRKRTIAESKKKHEEKQMKAQQLREKLREEKTLKLQKLMEREKDVRKWKEELLDQRRRMMEEKLLHAEFKREVQLQAIVKKAQEEEAKVNEIAFINTLEAQNKRHDVLNKLKEYEQRLNELQEERQRRQEEKQARDEAVQERKRALEAERQARVEELLMKRKEQEARIEQQRQEKEKAREDAARERARDREERLAALTAAQQEAMEELQKKIQLKHDESIRRHMEQIEQRKEKAAELSSGRHANTDYAPKLTPYERKKQCSLCNVMISSEVYLFSHIKGKKHQQAVRENSSIQGRELSDEEVEHLSLKKYIVDIVIESSVPVEPLKDGEEKQKIKKKAKKLKARMNSRAKEYESLMEAKNAVSDSPFKAKLQRLAKDLLKHLQMQDSCSLGNHKVPGLDRTLGEISRILEKENTADKIAFRAAGGLTALENILQMVTSPTNLNAAARVPFKSLCSTVNVYSLTCSNCIENCTYVLFSNKITFLMDLLIHQFTISVPDDQNATASRSVNKQVFEGLTTGLLRVTAVIFRCLISSFPDGNNHSTALKILQEVKSKSSQVEAFSSRVQDLISYVVNTGLVDKLCCCFLSVQGPVDENPSIASFLQNATAVLHGMCQLCWAVSGRSCSVFDSARQDPTGLTAALQATDLVGVLHMLYCVLFHGTISDPNTASPKDSYAASTVQVAIQSLRFFNSFAVLDLPAFQSIVGAEGLSLAFRHIISSLLWYCSQHTCEGLLHEVIICVGYFTVNNPDNQIIVQSGRHPTVLQKLCQLPFQYFSDPRLIKVLFPSLIAACYNNPQNKIILEQEMSCVLLATFIQDFAQSSGQVENQFFQQREKFFSPQDYLELSNRFPRQSWEEARQFFLKK
SIO_010081: SCAPER
subclass of: SO_0000673
so part of: SCAPER
location: complement(join(970398..970492,972068..972119,974606..974797,989816..989965,992936..993173,1002067..1002222,1005868..1006097,1012271..1012394,1019327..1019442,1035818..1035944,1045364..1045429,1048544..1048680,1061982..1062089,1063252..1063404,1063519..1063600,1067060..1067202,1067344..1067499,1069449..1069589,1070049..1070160,1070483..1070600,1071034..1071109,1071565..1071735,1072954..1073172,1073581..1073843,1079919..1080079,1081971..1082087,1082519..1082619,1090498..1090695,1094330..1094400,1100303..1100420,1102844..1102906))
location: region:970398-1102906:-1
so has part: feature:1102844-1102906:-1:exon
so has part: feature:1100303-1100420:-1:exon
so has part: feature:1094330-1094400:-1:exon
so has part: feature:1090498-1090695:-1:exon
so has part: feature:1082519-1082619:-1:exon
so has part: feature:1081971-1082087:-1:exon
so has part: feature:1079919-1080079:-1:exon
so has part: feature:1073581-1073843:-1:exon
so has part: feature:1072954-1073172:-1:exon
so has part: feature:1071565-1071735:-1:exon
so has part: feature:1071034-1071109:-1:exon
so has part: feature:1070483-1070600:-1:exon
so has part: feature:1070049-1070160:-1:exon
so has part: feature:1069449-1069589:-1:exon
so has part: feature:1067344-1067499:-1:exon
so has part: feature:1067060-1067202:-1:exon
so has part: feature:1063519-1063600:-1:exon
so has part: feature:1063252-1063404:-1:exon
so has part: feature:1061982-1062089:-1:exon
so has part: feature:1048544-1048680:-1:exon
so has part: feature:1045364-1045429:-1:exon
so has part: feature:1035818-1035944:-1:exon
so has part: feature:1019327-1019442:-1:exon
so has part: feature:1012271-1012394:-1:exon
so has part: feature:1005868-1006097:-1:exon
so has part: feature:1002067-1002222:-1:exon
so has part: feature:992936-993173:-1:exon
so has part: feature:989816-989965:-1:exon
so has part: feature:974606-974797:-1:exon
so has part: feature:972068-972119:-1:exon
so has part: feature:970398-970492:-1:exon

XP_021399081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1102844-1102906:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1100303-1100420:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1094330-1094400:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1090498-1090695:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1082519-1082619:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1081971-1082087:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1079919-1080079:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1073581-1073843:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1072954-1073172:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1071565-1071735:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1071034-1071109:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1070483-1070600:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1070049-1070160:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1069449-1069589:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1067344-1067499:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1067060-1067202:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1063519-1063600:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1063252-1063404:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1061982-1062089:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1048544-1048680:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1045364-1045429:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1035818-1035944:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1019327-1019442:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1012271-1012394:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1005868-1006097:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1002067-1002222:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:992936-993173:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:989816-989965:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:974606-974797:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:972068-972119:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:970398-970492:-1:exon

RCN2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: RCN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1109488..1120570
location: region:1109488-1120570:1
so has part: feature:1109488-1120570:1:exon
subclass of: SO_0000010

110477554
type: Gene
SIO_000068: ncbigene

position:1109488:1
position: 1109488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1120570:1
position: 1120570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1109488-1120570:1:exon

RCN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: RCN2
product: reticulocalbin 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 24 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_021543410.2
SIO_010081: RCN2
subclass of: SO_0000673
so part of: RCN2
location: join(1109488..1109625,1109732..1109837,1112554..1112750,1115221..1115334,1116063..1116159,1117838..1117980,1119775..1120570)
location: region:1109488-1120570:1
so has part: feature:1109488-1109625:1:exon
so has part: feature:1109732-1109837:1:exon
so has part: feature:1112554-1112750:1:exon
so has part: feature:1115221-1115334:1:exon
so has part: feature:1116063-1116159:1:exon
so has part: feature:1117838-1117980:1:exon
so has part: feature:1119775-1120570:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1109488-1109625:1:exon

position:1109625:1
position: 1109625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1109732-1109837:1:exon

position:1109732:1
position: 1109732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1109837:1
position: 1109837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1112554-1112750:1:exon

position:1112554:1
position: 1112554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1112750:1
position: 1112750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1115221-1115334:1:exon

position:1115221:1
position: 1115221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1115334:1
position: 1115334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1116063-1116159:1:exon

position:1116063:1
position: 1116063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1116159:1
position: 1116159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1117838-1117980:1:exon

position:1117838:1
position: 1117838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1117980:1
position: 1117980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1119775-1120570:1:exon

position:1119775:1
position: 1119775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RCN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: RCN2
product: reticulocalbin 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 25 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_021543411.2
SIO_010081: RCN2
subclass of: SO_0000673
so part of: RCN2
location: join(1109488..1109625,1109732..1109837,1112554..1112750,1115233..1115334,1116063..1116159,1117838..1117980,1119775..1120570)
location: region:1109488-1120570:1
so has part: feature:1109488-1109625:1:exon
so has part: feature:1109732-1109837:1:exon
so has part: feature:1112554-1112750:1:exon
so has part: feature:1115233-1115334:1:exon
so has part: feature:1116063-1116159:1:exon
so has part: feature:1117838-1117980:1:exon
so has part: feature:1119775-1120570:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1109488-1109625:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1109732-1109837:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1112554-1112750:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1115233-1115334:1:exon

position:1115233:1
position: 1115233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1116063-1116159:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1117838-1117980:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1119775-1120570:1:exon

RCN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: RCN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reticulocalbin-2 isoform X1
translation: MRPLLLALGLALALGAANGQHRAEYDREALLGGQEEAEEYVRLSPEEQQRRLKNIVKKIDADADGLLSEDELSSWIQQSFKHYVTQEAKQHFSDYDKDGDGLVSWKEYNLQMYDRVIDFDENTVLEDQEEESFRQLHLKEKKRFEKANRDDVPALNVDEYIAFEHPEEVEYMTDFVIQEALEEHDKDGDGFVSLEEFLGDYRRDPTAREDPEWILVEKDRFVNDYDKDHDGKLNPQELLSWIVPNNQGIAQEEALHLIEEMDLNDDKKLSEAEILKNQDLFLNSEATDYGRQLHDERFYHEEL
SIO_010081: RCN2
subclass of: SO_0000673
so part of: RCN2
location: join(1109524..1109625,1109732..1109837,1112554..1112750,1115221..1115334,1116063..1116159,1117838..1117980,1119775..1119927)
location: region:1109524-1119927:1
so has part: feature:1109524-1109625:1:exon
so has part: feature:1109732-1109837:1:exon
so has part: feature:1112554-1112750:1:exon
so has part: feature:1115221-1115334:1:exon
so has part: feature:1116063-1116159:1:exon
so has part: feature:1117838-1117980:1:exon
so has part: feature:1119775-1119927:1:exon

XP_021399085.1
type: Protein
SIO_000068: ncbiprotein

position:1109524:1
position: 1109524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1119927:1
position: 1119927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1109524-1109625:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1109732-1109837:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1112554-1112750:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1115221-1115334:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1116063-1116159:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1117838-1117980:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1119775-1119927:1:exon

RCN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: RCN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reticulocalbin-2 isoform X2
translation: MRPLLLALGLALALGAANGQHRAEYDREALLGGQEEAEEYVRLSPEEQQRRLKNIVKKIDADADGLLSEDELSSWIQQSFKHYVTQEAKQHFSDYDKDGDGLVSWKEYNLQMYDRVIDFDENTVLEDQEEESFRQEKKRFEKANRDDVPALNVDEYIAFEHPEEVEYMTDFVIQEALEEHDKDGDGFVSLEEFLGDYRRDPTAREDPEWILVEKDRFVNDYDKDHDGKLNPQELLSWIVPNNQGIAQEEALHLIEEMDLNDDKKLSEAEILKNQDLFLNSEATDYGRQLHDERFYHEEL
SIO_010081: RCN2
subclass of: SO_0000673
so part of: RCN2
location: join(1109524..1109625,1109732..1109837,1112554..1112750,1115233..1115334,1116063..1116159,1117838..1117980,1119775..1119927)
location: region:1109524-1119927:1
so has part: feature:1109524-1109625:1:exon
so has part: feature:1109732-1109837:1:exon
so has part: feature:1112554-1112750:1:exon
so has part: feature:1115233-1115334:1:exon
so has part: feature:1116063-1116159:1:exon
so has part: feature:1117838-1117980:1:exon
so has part: feature:1119775-1119927:1:exon

XP_021399086.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1109524-1109625:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1109732-1109837:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1112554-1112750:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1115233-1115334:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1116063-1116159:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1117838-1117980:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1119775-1119927:1:exon

PSTPIP1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: PSTPIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1126343..1173404
location: region:1126343-1173404:1
so has part: feature:1126343-1173404:1:exon
subclass of: SO_0000010

110477553
type: Gene
SIO_000068: ncbigene

position:1126343:1
position: 1126343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1173404:1
position: 1173404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1126343-1173404:1:exon

PSTPIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PSTPIP1
product: proline-serine-threonine phosphatase interacting protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021543408.2
SIO_010081: PSTPIP1
subclass of: SO_0000673
so part of: PSTPIP1
location: join(1126343..1126515,1142506..1142606,1146188..1146262,1156417..1156451,1157243..1157349,1159046..1159108,1160041..1160139,1161806..1161851,1162658..1162737,1165066..1165164,1165683..1165779,1168493..1168577,1170099..1170169,1171364..1171461,1173001..1173404)
location: region:1126343-1173404:1
so has part: feature:1126343-1126515:1:exon
so has part: feature:1142506-1142606:1:exon
so has part: feature:1146188-1146262:1:exon
so has part: feature:1156417-1156451:1:exon
so has part: feature:1157243-1157349:1:exon
so has part: feature:1159046-1159108:1:exon
so has part: feature:1160041-1160139:1:exon
so has part: feature:1161806-1161851:1:exon
so has part: feature:1162658-1162737:1:exon
so has part: feature:1165066-1165164:1:exon
so has part: feature:1165683-1165779:1:exon
so has part: feature:1168493-1168577:1:exon
so has part: feature:1170099-1170169:1:exon
so has part: feature:1171364-1171461:1:exon
so has part: feature:1173001-1173404:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1126343-1126515:1:exon

position:1126515:1
position: 1126515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1142506-1142606:1:exon

position:1142506:1
position: 1142506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1142606:1
position: 1142606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1146188-1146262:1:exon

position:1146188:1
position: 1146188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1146262:1
position: 1146262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1156417-1156451:1:exon

position:1156417:1
position: 1156417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1156451:1
position: 1156451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1157243-1157349:1:exon

position:1157243:1
position: 1157243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1157349:1
position: 1157349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1159046-1159108:1:exon

position:1159046:1
position: 1159046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1159108:1
position: 1159108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1160041-1160139:1:exon

position:1160041:1
position: 1160041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1160139:1
position: 1160139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1161806-1161851:1:exon

position:1161806:1
position: 1161806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1161851:1
position: 1161851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1162658-1162737:1:exon

position:1162658:1
position: 1162658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1162737:1
position: 1162737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1165066-1165164:1:exon

position:1165066:1
position: 1165066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1165164:1
position: 1165164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1165683-1165779:1:exon

position:1165683:1
position: 1165683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1165779:1
position: 1165779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1168493-1168577:1:exon

position:1168493:1
position: 1168493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1168577:1
position: 1168577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1170099-1170169:1:exon

position:1170099:1
position: 1170099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1170169:1
position: 1170169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1171364-1171461:1:exon

position:1171364:1
position: 1171364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1171461:1
position: 1171461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1173001-1173404:1:exon

position:1173001:1
position: 1173001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSTPIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PSTPIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-serine-threonine phosphatase-interacting protein 1
translation: MAQLQFKDAFWCKEFTFHTGYEVLVQRLLEGKKMCKDVEDLLKQRAQAEERYGKELVQIARKAGGQTEINTLKEAFEMLKQQIESVGNSHIQLAVMLKEELKGIEEFRERQKEQRKKYESAMERMQKSKLSHYKKTMESKKSYEQKCREADEAEQSFERTSAAGNPKQTEKSQNKAKQCRDAANEAENVYKQNIEQLDKVRTEWEQEHIKTCEVFQLQECDRITILRNSLWVHCNQLSLQCVKDDEMYEEVRVSLENCVVESDIDYFIKTKMTGTQPPDAIGYESYYSREPRRRSSSPTQSCGVIKRFSGLLHGSSKNNTETATPSAPPLERTEGVYASIFVNEKAEITSSQDYRVLYDYTAQNVDELDISEGDTVVVIAENEDGWWTAERNGQRGFVPGSYLEKL
SIO_010081: PSTPIP1
subclass of: SO_0000673
so part of: PSTPIP1
location: join(1126483..1126515,1142506..1142606,1146188..1146262,1156417..1156451,1157243..1157349,1159046..1159108,1160041..1160139,1161806..1161851,1162658..1162737,1165066..1165164,1165683..1165779,1168493..1168577,1170099..1170169,1171364..1171461,1173001..1173132)
location: region:1126483-1173132:1
so has part: feature:1126483-1126515:1:exon
so has part: feature:1142506-1142606:1:exon
so has part: feature:1146188-1146262:1:exon
so has part: feature:1156417-1156451:1:exon
so has part: feature:1157243-1157349:1:exon
so has part: feature:1159046-1159108:1:exon
so has part: feature:1160041-1160139:1:exon
so has part: feature:1161806-1161851:1:exon
so has part: feature:1162658-1162737:1:exon
so has part: feature:1165066-1165164:1:exon
so has part: feature:1165683-1165779:1:exon
so has part: feature:1168493-1168577:1:exon
so has part: feature:1170099-1170169:1:exon
so has part: feature:1171364-1171461:1:exon
so has part: feature:1173001-1173132:1:exon

XP_021399083.1
type: Protein
SIO_000068: ncbiprotein

position:1126483:1
position: 1126483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1173132:1
position: 1173132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1126483-1126515:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1142506-1142606:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1146188-1146262:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1156417-1156451:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1157243-1157349:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1159046-1159108:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1160041-1160139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1161806-1161851:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1162658-1162737:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1165066-1165164:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1165683-1165779:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1168493-1168577:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1170099-1170169:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1171364-1171461:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1173001-1173132:1:exon

TSPAN3
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TSPAN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1183277..1205064)
location: region:1183277-1205064:-1
so has part: feature:1183277-1205064:-1:exon
subclass of: SO_0000010

110477555
type: Gene
SIO_000068: ncbigene

position:1183277:-1
position: 1183277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205064:-1
position: 1205064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1183277-1205064:-1:exon

TSPAN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TSPAN3
product: tetraspanin 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 58 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_021543412.2
SIO_010081: TSPAN3
subclass of: SO_0000673
so part of: TSPAN3
location: complement(join(1183277..1184222,1188459..1188542,1188801..1188953,1189271..1189372,1192944..1193018,1194028..1194219,1204915..1205064))
location: region:1183277-1205064:-1
so has part: feature:1204915-1205064:-1:exon
so has part: feature:1194028-1194219:-1:exon
so has part: feature:1192944-1193018:-1:exon
so has part: feature:1189271-1189372:-1:exon
so has part: feature:1188801-1188953:-1:exon
so has part: feature:1188459-1188542:-1:exon
so has part: feature:1183277-1184222:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1204915-1205064:-1:exon

position:1204915:-1
position: 1204915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1194028-1194219:-1:exon

position:1194028:-1
position: 1194028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1194219:-1
position: 1194219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1192944-1193018:-1:exon

position:1192944:-1
position: 1192944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1193018:-1
position: 1193018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1189271-1189372:-1:exon

position:1189271:-1
position: 1189271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1189372:-1
position: 1189372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1188801-1188953:-1:exon

position:1188801:-1
position: 1188801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1188953:-1
position: 1188953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1188459-1188542:-1:exon

position:1188459:-1
position: 1188459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1188542:-1
position: 1188542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1183277-1184222:-1:exon

position:1184222:-1
position: 1184222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TSPAN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TSPAN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-3
translation: MGQCGITSSKTVLVFLNLIFWAAAGILCYVGAYVFITYDDYDHFFEDVYTLIPAVIIIAVGTLLFIIGLIGCCATIRESRCGLATFVIILLLVFITEVVVVVLGYIYRAKVEDEVDHSIRKVYNRYNGTNPDAASRAIDYVQRQLRCCGIHNYSDWENTIWFKQTKNNSVPLSCCKAALSNCTGSLTRPMDLYSEGCEALVVKKLQEIMMYVIWAALAFAAIQLLGMLCACIVLCRRSRDPAYELLIAGGTYA
SIO_010081: TSPAN3
subclass of: SO_0000673
so part of: TSPAN3
location: complement(join(1184130..1184222,1188459..1188542,1188801..1188953,1189271..1189372,1192944..1193018,1194028..1194219,1204915..1204977))
location: region:1184130-1204977:-1
so has part: feature:1204915-1204977:-1:exon
so has part: feature:1194028-1194219:-1:exon
so has part: feature:1192944-1193018:-1:exon
so has part: feature:1189271-1189372:-1:exon
so has part: feature:1188801-1188953:-1:exon
so has part: feature:1188459-1188542:-1:exon
so has part: feature:1184130-1184222:-1:exon

XP_021399087.1
type: Protein
SIO_000068: ncbiprotein

position:1184130:-1
position: 1184130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204977:-1
position: 1204977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1204915-1204977:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1194028-1194219:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1192944-1193018:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1189271-1189372:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1188801-1188953:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1188459-1188542:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1184130-1184222:-1:exon

PEAK1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: PEAK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1222100..1332573)
location: region:1222100-1332573:-1
so has part: feature:1222100-1332573:-1:exon
subclass of: SO_0000010

110477556
type: Gene
SIO_000068: ncbigene

position:1222100:-1
position: 1222100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1332573:-1
position: 1332573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1222100-1332573:-1:exon

PEAK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PEAK1
product: pseudopodium enriched atypical kinase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021543413.2
SIO_010081: PEAK1
subclass of: SO_0000673
so part of: PEAK1
location: complement(join(1222100..1229427,1238260..1239008,1246181..1246377,1248147..1248263,1254562..1257822,1284338..1284508,1332452..1332573))
location: region:1222100-1332573:-1
so has part: feature:1332452-1332573:-1:exon
so has part: feature:1284338-1284508:-1:exon
so has part: feature:1254562-1257822:-1:exon
so has part: feature:1248147-1248263:-1:exon
so has part: feature:1246181-1246377:-1:exon
so has part: feature:1238260-1239008:-1:exon
so has part: feature:1222100-1229427:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1332452-1332573:-1:exon

position:1332452:-1
position: 1332452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1284338-1284508:-1:exon

position:1284338:-1
position: 1284338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1284508:-1
position: 1284508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1254562-1257822:-1:exon

position:1254562:-1
position: 1254562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1257822:-1
position: 1257822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1248147-1248263:-1:exon

position:1248147:-1
position: 1248147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1248263:-1
position: 1248263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1246181-1246377:-1:exon

position:1246181:-1
position: 1246181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1246377:-1
position: 1246377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1238260-1239008:-1:exon

position:1238260:-1
position: 1238260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1239008:-1
position: 1239008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1222100-1229427:-1:exon

position:1229427:-1
position: 1229427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PEAK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PEAK1
product: pseudopodium enriched atypical kinase 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021543420.2
SIO_010081: PEAK1
subclass of: SO_0000673
so part of: PEAK1
location: complement(join(1222100..1229427,1238260..1239008,1246181..1246377,1254562..1257822,1284338..1284508,1332452..1332572))
location: region:1222100-1332572:-1
so has part: feature:1332452-1332572:-1:exon
so has part: feature:1284338-1284508:-1:exon
so has part: feature:1254562-1257822:-1:exon
so has part: feature:1246181-1246377:-1:exon
so has part: feature:1238260-1239008:-1:exon
so has part: feature:1222100-1229427:-1:exon

position:1332572:-1
position: 1332572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1332452-1332572:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1284338-1284508:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1254562-1257822:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1246181-1246377:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1238260-1239008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1222100-1229427:-1:exon

PEAK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PEAK1
product: pseudopodium enriched atypical kinase 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021543419.2
SIO_010081: PEAK1
subclass of: SO_0000673
so part of: PEAK1
location: complement(join(1222100..1229427,1238260..1239008,1246181..1246377,1248147..1248263,1254562..1257822,1332452..1332470))
location: region:1222100-1332470:-1
so has part: feature:1332452-1332470:-1:exon
so has part: feature:1254562-1257822:-1:exon
so has part: feature:1248147-1248263:-1:exon
so has part: feature:1246181-1246377:-1:exon
so has part: feature:1238260-1239008:-1:exon
so has part: feature:1222100-1229427:-1:exon

position:1332470:-1
position: 1332470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1332452-1332470:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1254562-1257822:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1248147-1248263:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1246181-1246377:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1238260-1239008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1222100-1229427:-1:exon

PEAK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PEAK1
product: pseudopodium enriched atypical kinase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021543416.2
SIO_010081: PEAK1
subclass of: SO_0000673
so part of: PEAK1
location: complement(join(1222100..1229427,1238260..1239008,1246181..1246377,1248147..1248263,1254562..1257822,1284338..1284508,1325926..1326012))
location: region:1222100-1326012:-1
so has part: feature:1325926-1326012:-1:exon
so has part: feature:1284338-1284508:-1:exon
so has part: feature:1254562-1257822:-1:exon
so has part: feature:1248147-1248263:-1:exon
so has part: feature:1246181-1246377:-1:exon
so has part: feature:1238260-1239008:-1:exon
so has part: feature:1222100-1229427:-1:exon

position:1326012:-1
position: 1326012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1325926-1326012:-1:exon

position:1325926:-1
position: 1325926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1284338-1284508:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1254562-1257822:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1248147-1248263:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1246181-1246377:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1238260-1239008:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1222100-1229427:-1:exon

PEAK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PEAK1
product: pseudopodium enriched atypical kinase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021543417.2
SIO_010081: PEAK1
subclass of: SO_0000673
so part of: PEAK1
location: complement(join(1222100..1229427,1238260..1239008,1246181..1246377,1248147..1248263,1254562..1257822,1325926..1325968))
location: region:1222100-1325968:-1
so has part: feature:1325926-1325968:-1:exon
so has part: feature:1254562-1257822:-1:exon
so has part: feature:1248147-1248263:-1:exon
so has part: feature:1246181-1246377:-1:exon
so has part: feature:1238260-1239008:-1:exon
so has part: feature:1222100-1229427:-1:exon

position:1325968:-1
position: 1325968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1325926-1325968:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1254562-1257822:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1248147-1248263:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1246181-1246377:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1238260-1239008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1222100-1229427:-1:exon

PEAK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PEAK1
product: pseudopodium enriched atypical kinase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021543415.2
SIO_010081: PEAK1
subclass of: SO_0000673
so part of: PEAK1
location: complement(join(1222100..1229427,1238260..1239008,1246181..1246377,1248147..1248263,1254562..1257822,1284338..1284508,1306783..1306836))
location: region:1222100-1306836:-1
so has part: feature:1306783-1306836:-1:exon
so has part: feature:1284338-1284508:-1:exon
so has part: feature:1254562-1257822:-1:exon
so has part: feature:1248147-1248263:-1:exon
so has part: feature:1246181-1246377:-1:exon
so has part: feature:1238260-1239008:-1:exon
so has part: feature:1222100-1229427:-1:exon

position:1306836:-1
position: 1306836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1306783-1306836:-1:exon

position:1306783:-1
position: 1306783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1284338-1284508:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1254562-1257822:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1248147-1248263:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1246181-1246377:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1238260-1239008:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1222100-1229427:-1:exon

PEAK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PEAK1
product: pseudopodium enriched atypical kinase 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021543418.2
SIO_010081: PEAK1
subclass of: SO_0000673
so part of: PEAK1
location: complement(join(1222100..1229427,1238260..1239008,1246181..1246377,1248147..1248263,1254562..1257822,1306783..1306801))
location: region:1222100-1306801:-1
so has part: feature:1306783-1306801:-1:exon
so has part: feature:1254562-1257822:-1:exon
so has part: feature:1248147-1248263:-1:exon
so has part: feature:1246181-1246377:-1:exon
so has part: feature:1238260-1239008:-1:exon
so has part: feature:1222100-1229427:-1:exon

position:1306801:-1
position: 1306801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1306783-1306801:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1254562-1257822:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1248147-1248263:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1246181-1246377:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1238260-1239008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1222100-1229427:-1:exon

PEAK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PEAK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive tyrosine-protein kinase PEAK1 isoform X2
translation: MSACNTFTEHVWKPGECKNCFKPKSLHQLPPVSEKKPLSHGNLKPNANQSSSQRGRGSGSFRPPVAKKPTIAVKPTMMVADGLCWELTTLEQCENKPLPVGWNRNKAVLSKKPLNNNNEEEIEGYSHVPRPYGNSEGVGKIPSNNNNGLTEVLKEIAGLDTTPQLTGNETNSRETFLGRINNCYKRSLERKIPPSCMVAGMKDSQSKHVILSGSTEVISNEGGRFCYPELSSGDESEDDTFFGSMQEEHESWDESDEELLAMEIRMRGQPRFANFRANTLSPVPFCVDKKWNTVPLRNKSLQRICAVDYDDSYDEILNGYGEETVILYGQESMQSMVSSDSTSPDSSLTEESRSGTTSSSSQKLCNGGLSPSTPQDLKVIEPEYESLCDNQQVKDVPKAPRNALKSQETHKAVLALRLEEKDGKIAVQTDTQENKSSSDAAGQAVTINLVPMEEQAKPYRVVNMEQPVCKPYTVVDVSAAMTSECKENQTETSETKKAASNPSSPVTPGTPIASSAASPVHVHANLKKSSAIRYQEVWTSSTSPRQKIPKVELIGNSSGPSVPPRKTSHKSAPTSPTATNVSSKTIPVKSPNLSEIKFNSYNNAGMPPFPIIIHDEPTYARSSKNAVKVPIVINPNAYDNLAIYKSFLGTTGELSVKDKTTSVISHTYEEIETETKGTEAIGSKSTELPQARGVASSSECRLGSVAQKVQEFNSCLTKSQISPQRSHSADHSSPSRVQKAMQEPTAKADITPDGSIGSSGGRENASTVLSQIVASIQPPQSPPETPQSAPKSCSVEELYSLPPEGDATKNTLVRPKSLFTSQPEAESSKMESTAIKMQKDPLSQPAATPSPKPARATPSVTSPQAEQAPPFPPPRSTSSPYHASNLLQRHFSNWAKPNSPTRSTEAESILHSEGRRPDAKPKRWISFKSFFRRRKADDEEEREKEREKGKLVGLDGTVIHMLPPPPVQRHHWFSEAKSDSSEKPSIVFMYRCDPAQAEPRADLPHQAGLDSAIAEALAKDKGETQEKPPESLEQNIAGHSSPPQAPKKIPSQVPDEPALEELSPRVPRAVFVKQDNGGSASVIPVSSARAPPAEEEKEEAPRSPDLSTCSATYSNLGQSRAAMIPPKQPRQPKGALDDAIAFGGLTDQETANNLQPTPPPLPKKTILRANTEPTPRDLQKQALENNLCIMANPTYDIDTNWEASSACSSVSLELKVLDNESGDSLDRPTEKLRAATSATNSVSSLTTLSVKERCSNSMESLTGRRLSQAKQGRGVQKPQRQALYRGIENREEVVGKIRSLHADSLKKLALRCEDLFMAGQKDQLRFGVDSWSDFRLTSDKPCCEAGDAVYYPASYAKDPLNNYAVKICKSKAKESQQYYHSLSIRQSLAINFNIQQDCGHFLAEVPVRLLPWEDDDAPDVEEEREEEEKEAEQKNRDAASSPEASRRDSPSSQGTISKPRSRVVVITREVPQLTVADFVRESAPRHSKSPDLYERQVCLLLLQLCLGLEHLKPYHITHCDLRLENLLLVHSRPGGSTLGPEATEPNPNTACPARLIVSNFSQAKQKSHMVDPEVLRDQSRLAPEIITATQYKKCDEFQTGILIYEMLHLPNPFDENPELKEKEYTCADLPKIPCRSLYSQGLQQLASCLLNPNPSERILISEAKGILQCLLWGPREDLFLALSTSSNPSRRDAILQNWLDIKRTLLMIKFAEKSLERDCGIILEDWLCCQYLAFATTDSLHRIVMRLMKQH
SIO_010081: PEAK1
subclass of: SO_0000673
so part of: PEAK1
location: complement(join(1228270..1229427,1238260..1239008,1246181..1246377,1254562..1257713))
location: region:1228270-1257713:-1
so has part: feature:1254562-1257713:-1:exon
so has part: feature:1246181-1246377:-1:exon
so has part: feature:1238260-1239008:-1:exon
so has part: feature:1228270-1229427:-1:exon

XP_021399095.1
type: Protein
SIO_000068: ncbiprotein

position:1228270:-1
position: 1228270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1257713:-1
position: 1257713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1254562-1257713:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1246181-1246377:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1238260-1239008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1228270-1229427:-1:exon

PEAK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PEAK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive tyrosine-protein kinase PEAK1 isoform X1
translation: MSACNTFTEHVWKPGECKNCFKPKSLHQLPPVSEKKPLSHGNLKPNANQSSSQRGRGSGSFRPPVAKKPTIAVKPTMMVADGLCWELTTLEQCENKPLPVGWNRNKAVLSKKPLNNNNEEEIEGYSHVPRPYGNSEGVGKIPSNNNNGLTEVLKEIAGLDTTPQLTGNETNSRETFLGRINNCYKRSLERKIPPSCMVAGMKDSQSKHVILSGSTEVISNEGGRFCYPELSSGDESEDDTFFGSMQEEHESWDESDEELLAMEIRMRGQPRFANFRANTLSPVPFCVDKKWNTVPLRNKSLQRICAVDYDDSYDEILNGYGEETVILYGQESMQSMVSSDSTSPDSSLTEESRSGTTSSSSQKLCNGGLSPSTPQDLKVIEPEYESLCDNQQVKDVPKAPRNALKSQETHKAVLALRLEEKDGKIAVQTDTQENKSSSDAAGQAVTINLVPMEEQAKPYRVVNMEQPVCKPYTVVDVSAAMTSECKENQTETSETKKAASNPSSPVTPGTPIASSAASPVHVHANLKKSSAIRYQEVWTSSTSPRQKIPKVELIGNSSGPSVPPRKTSHKSAPTSPTATNVSSKTIPVKSPNLSEIKFNSYNNAGMPPFPIIIHDEPTYARSSKNAVKVPIVINPNAYDNLAIYKSFLGTTGELSVKDKTTSVISHTYEEIETETKGTEAIGSKSTELPQARGVASSSECRLGSVAQKVQEFNSCLTKSQISPQRSHSADHSSPSRVQKAMQEPTAKADITPDGSIGSSGGRENASTVLSQIVASIQPPQSPPETPQSAPKSCSVEELYSLPPEGDATKNTLVRPKSLFTSQPEAESSKMESTAIKMQKDPLSQPAATPSPKPARATPSVTSPQAEQAPPFPPPRSTSSPYHASNLLQRHFSNWAKPNSPTRSTEAESILHSEGRRPDAKPKRWISFKSFFRRRKADDEEEREKEREKGKLVGLDGTVIHMLPPPPVQRHHWFSEAKSDSSEKPSIVFMYRCDPAQAEPRADLPHQAGLDSAIAEALAKDKGETQEKPPESLEQNIAGHSSPPQAPKKIPSTPEHCGINGSPEFQDMIKRLKKALKEFPLMGNCVSEYSGQVPDEPALEELSPRVPRAVFVKQDNGGSASVIPVSSARAPPAEEEKEEAPRSPDLSTCSATYSNLGQSRAAMIPPKQPRQPKGALDDAIAFGGLTDQETANNLQPTPPPLPKKTILRANTEPTPRDLQKQALENNLCIMANPTYDIDTNWEASSACSSVSLELKVLDNESGDSLDRPTEKLRAATSATNSVSSLTTLSVKERCSNSMESLTGRRLSQAKQGRGVQKPQRQALYRGIENREEVVGKIRSLHADSLKKLALRCEDLFMAGQKDQLRFGVDSWSDFRLTSDKPCCEAGDAVYYPASYAKDPLNNYAVKICKSKAKESQQYYHSLSIRQSLAINFNIQQDCGHFLAEVPVRLLPWEDDDAPDVEEEREEEEKEAEQKNRDAASSPEASRRDSPSSQGTISKPRSRVVVITREVPQLTVADFVRESAPRHSKSPDLYERQVCLLLLQLCLGLEHLKPYHITHCDLRLENLLLVHSRPGGSTLGPEATEPNPNTACPARLIVSNFSQAKQKSHMVDPEVLRDQSRLAPEIITATQYKKCDEFQTGILIYEMLHLPNPFDENPELKEKEYTCADLPKIPCRSLYSQGLQQLASCLLNPNPSERILISEAKGILQCLLWGPREDLFLALSTSSNPSRRDAILQNWLDIKRTLLMIKFAEKSLERDCGIILEDWLCCQYLAFATTDSLHRIVMRLMKQH
SIO_010081: PEAK1
subclass of: SO_0000673
so part of: PEAK1
location: complement(join(1228270..1229427,1238260..1239008,1246181..1246377,1248147..1248263,1254562..1257713))
location: region:1228270-1257713:-1
so has part: feature:1254562-1257713:-1:exon
so has part: feature:1248147-1248263:-1:exon
so has part: feature:1246181-1246377:-1:exon
so has part: feature:1238260-1239008:-1:exon
so has part: feature:1228270-1229427:-1:exon

XP_021399088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1254562-1257713:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1248147-1248263:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1246181-1246377:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1238260-1239008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1228270-1229427:-1:exon

PEAK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PEAK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive tyrosine-protein kinase PEAK1 isoform X1
translation: MSACNTFTEHVWKPGECKNCFKPKSLHQLPPVSEKKPLSHGNLKPNANQSSSQRGRGSGSFRPPVAKKPTIAVKPTMMVADGLCWELTTLEQCENKPLPVGWNRNKAVLSKKPLNNNNEEEIEGYSHVPRPYGNSEGVGKIPSNNNNGLTEVLKEIAGLDTTPQLTGNETNSRETFLGRINNCYKRSLERKIPPSCMVAGMKDSQSKHVILSGSTEVISNEGGRFCYPELSSGDESEDDTFFGSMQEEHESWDESDEELLAMEIRMRGQPRFANFRANTLSPVPFCVDKKWNTVPLRNKSLQRICAVDYDDSYDEILNGYGEETVILYGQESMQSMVSSDSTSPDSSLTEESRSGTTSSSSQKLCNGGLSPSTPQDLKVIEPEYESLCDNQQVKDVPKAPRNALKSQETHKAVLALRLEEKDGKIAVQTDTQENKSSSDAAGQAVTINLVPMEEQAKPYRVVNMEQPVCKPYTVVDVSAAMTSECKENQTETSETKKAASNPSSPVTPGTPIASSAASPVHVHANLKKSSAIRYQEVWTSSTSPRQKIPKVELIGNSSGPSVPPRKTSHKSAPTSPTATNVSSKTIPVKSPNLSEIKFNSYNNAGMPPFPIIIHDEPTYARSSKNAVKVPIVINPNAYDNLAIYKSFLGTTGELSVKDKTTSVISHTYEEIETETKGTEAIGSKSTELPQARGVASSSECRLGSVAQKVQEFNSCLTKSQISPQRSHSADHSSPSRVQKAMQEPTAKADITPDGSIGSSGGRENASTVLSQIVASIQPPQSPPETPQSAPKSCSVEELYSLPPEGDATKNTLVRPKSLFTSQPEAESSKMESTAIKMQKDPLSQPAATPSPKPARATPSVTSPQAEQAPPFPPPRSTSSPYHASNLLQRHFSNWAKPNSPTRSTEAESILHSEGRRPDAKPKRWISFKSFFRRRKADDEEEREKEREKGKLVGLDGTVIHMLPPPPVQRHHWFSEAKSDSSEKPSIVFMYRCDPAQAEPRADLPHQAGLDSAIAEALAKDKGETQEKPPESLEQNIAGHSSPPQAPKKIPSTPEHCGINGSPEFQDMIKRLKKALKEFPLMGNCVSEYSGQVPDEPALEELSPRVPRAVFVKQDNGGSASVIPVSSARAPPAEEEKEEAPRSPDLSTCSATYSNLGQSRAAMIPPKQPRQPKGALDDAIAFGGLTDQETANNLQPTPPPLPKKTILRANTEPTPRDLQKQALENNLCIMANPTYDIDTNWEASSACSSVSLELKVLDNESGDSLDRPTEKLRAATSATNSVSSLTTLSVKERCSNSMESLTGRRLSQAKQGRGVQKPQRQALYRGIENREEVVGKIRSLHADSLKKLALRCEDLFMAGQKDQLRFGVDSWSDFRLTSDKPCCEAGDAVYYPASYAKDPLNNYAVKICKSKAKESQQYYHSLSIRQSLAINFNIQQDCGHFLAEVPVRLLPWEDDDAPDVEEEREEEEKEAEQKNRDAASSPEASRRDSPSSQGTISKPRSRVVVITREVPQLTVADFVRESAPRHSKSPDLYERQVCLLLLQLCLGLEHLKPYHITHCDLRLENLLLVHSRPGGSTLGPEATEPNPNTACPARLIVSNFSQAKQKSHMVDPEVLRDQSRLAPEIITATQYKKCDEFQTGILIYEMLHLPNPFDENPELKEKEYTCADLPKIPCRSLYSQGLQQLASCLLNPNPSERILISEAKGILQCLLWGPREDLFLALSTSSNPSRRDAILQNWLDIKRTLLMIKFAEKSLERDCGIILEDWLCCQYLAFATTDSLHRIVMRLMKQH
SIO_010081: PEAK1
subclass of: SO_0000673
so part of: PEAK1
location: complement(join(1228270..1229427,1238260..1239008,1246181..1246377,1248147..1248263,1254562..1257713))
location: region:1228270-1257713:-1
so has part: feature:1254562-1257713:-1:exon
so has part: feature:1248147-1248263:-1:exon
so has part: feature:1246181-1246377:-1:exon
so has part: feature:1238260-1239008:-1:exon
so has part: feature:1228270-1229427:-1:exon

XP_021399090.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1254562-1257713:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1248147-1248263:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1246181-1246377:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1238260-1239008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1228270-1229427:-1:exon

PEAK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PEAK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive tyrosine-protein kinase PEAK1 isoform X1
translation: MSACNTFTEHVWKPGECKNCFKPKSLHQLPPVSEKKPLSHGNLKPNANQSSSQRGRGSGSFRPPVAKKPTIAVKPTMMVADGLCWELTTLEQCENKPLPVGWNRNKAVLSKKPLNNNNEEEIEGYSHVPRPYGNSEGVGKIPSNNNNGLTEVLKEIAGLDTTPQLTGNETNSRETFLGRINNCYKRSLERKIPPSCMVAGMKDSQSKHVILSGSTEVISNEGGRFCYPELSSGDESEDDTFFGSMQEEHESWDESDEELLAMEIRMRGQPRFANFRANTLSPVPFCVDKKWNTVPLRNKSLQRICAVDYDDSYDEILNGYGEETVILYGQESMQSMVSSDSTSPDSSLTEESRSGTTSSSSQKLCNGGLSPSTPQDLKVIEPEYESLCDNQQVKDVPKAPRNALKSQETHKAVLALRLEEKDGKIAVQTDTQENKSSSDAAGQAVTINLVPMEEQAKPYRVVNMEQPVCKPYTVVDVSAAMTSECKENQTETSETKKAASNPSSPVTPGTPIASSAASPVHVHANLKKSSAIRYQEVWTSSTSPRQKIPKVELIGNSSGPSVPPRKTSHKSAPTSPTATNVSSKTIPVKSPNLSEIKFNSYNNAGMPPFPIIIHDEPTYARSSKNAVKVPIVINPNAYDNLAIYKSFLGTTGELSVKDKTTSVISHTYEEIETETKGTEAIGSKSTELPQARGVASSSECRLGSVAQKVQEFNSCLTKSQISPQRSHSADHSSPSRVQKAMQEPTAKADITPDGSIGSSGGRENASTVLSQIVASIQPPQSPPETPQSAPKSCSVEELYSLPPEGDATKNTLVRPKSLFTSQPEAESSKMESTAIKMQKDPLSQPAATPSPKPARATPSVTSPQAEQAPPFPPPRSTSSPYHASNLLQRHFSNWAKPNSPTRSTEAESILHSEGRRPDAKPKRWISFKSFFRRRKADDEEEREKEREKGKLVGLDGTVIHMLPPPPVQRHHWFSEAKSDSSEKPSIVFMYRCDPAQAEPRADLPHQAGLDSAIAEALAKDKGETQEKPPESLEQNIAGHSSPPQAPKKIPSTPEHCGINGSPEFQDMIKRLKKALKEFPLMGNCVSEYSGQVPDEPALEELSPRVPRAVFVKQDNGGSASVIPVSSARAPPAEEEKEEAPRSPDLSTCSATYSNLGQSRAAMIPPKQPRQPKGALDDAIAFGGLTDQETANNLQPTPPPLPKKTILRANTEPTPRDLQKQALENNLCIMANPTYDIDTNWEASSACSSVSLELKVLDNESGDSLDRPTEKLRAATSATNSVSSLTTLSVKERCSNSMESLTGRRLSQAKQGRGVQKPQRQALYRGIENREEVVGKIRSLHADSLKKLALRCEDLFMAGQKDQLRFGVDSWSDFRLTSDKPCCEAGDAVYYPASYAKDPLNNYAVKICKSKAKESQQYYHSLSIRQSLAINFNIQQDCGHFLAEVPVRLLPWEDDDAPDVEEEREEEEKEAEQKNRDAASSPEASRRDSPSSQGTISKPRSRVVVITREVPQLTVADFVRESAPRHSKSPDLYERQVCLLLLQLCLGLEHLKPYHITHCDLRLENLLLVHSRPGGSTLGPEATEPNPNTACPARLIVSNFSQAKQKSHMVDPEVLRDQSRLAPEIITATQYKKCDEFQTGILIYEMLHLPNPFDENPELKEKEYTCADLPKIPCRSLYSQGLQQLASCLLNPNPSERILISEAKGILQCLLWGPREDLFLALSTSSNPSRRDAILQNWLDIKRTLLMIKFAEKSLERDCGIILEDWLCCQYLAFATTDSLHRIVMRLMKQH
SIO_010081: PEAK1
subclass of: SO_0000673
so part of: PEAK1
location: complement(join(1228270..1229427,1238260..1239008,1246181..1246377,1248147..1248263,1254562..1257713))
location: region:1228270-1257713:-1
so has part: feature:1254562-1257713:-1:exon
so has part: feature:1248147-1248263:-1:exon
so has part: feature:1246181-1246377:-1:exon
so has part: feature:1238260-1239008:-1:exon
so has part: feature:1228270-1229427:-1:exon

XP_021399091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1254562-1257713:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1248147-1248263:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1246181-1246377:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1238260-1239008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1228270-1229427:-1:exon

PEAK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PEAK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive tyrosine-protein kinase PEAK1 isoform X1
translation: MSACNTFTEHVWKPGECKNCFKPKSLHQLPPVSEKKPLSHGNLKPNANQSSSQRGRGSGSFRPPVAKKPTIAVKPTMMVADGLCWELTTLEQCENKPLPVGWNRNKAVLSKKPLNNNNEEEIEGYSHVPRPYGNSEGVGKIPSNNNNGLTEVLKEIAGLDTTPQLTGNETNSRETFLGRINNCYKRSLERKIPPSCMVAGMKDSQSKHVILSGSTEVISNEGGRFCYPELSSGDESEDDTFFGSMQEEHESWDESDEELLAMEIRMRGQPRFANFRANTLSPVPFCVDKKWNTVPLRNKSLQRICAVDYDDSYDEILNGYGEETVILYGQESMQSMVSSDSTSPDSSLTEESRSGTTSSSSQKLCNGGLSPSTPQDLKVIEPEYESLCDNQQVKDVPKAPRNALKSQETHKAVLALRLEEKDGKIAVQTDTQENKSSSDAAGQAVTINLVPMEEQAKPYRVVNMEQPVCKPYTVVDVSAAMTSECKENQTETSETKKAASNPSSPVTPGTPIASSAASPVHVHANLKKSSAIRYQEVWTSSTSPRQKIPKVELIGNSSGPSVPPRKTSHKSAPTSPTATNVSSKTIPVKSPNLSEIKFNSYNNAGMPPFPIIIHDEPTYARSSKNAVKVPIVINPNAYDNLAIYKSFLGTTGELSVKDKTTSVISHTYEEIETETKGTEAIGSKSTELPQARGVASSSECRLGSVAQKVQEFNSCLTKSQISPQRSHSADHSSPSRVQKAMQEPTAKADITPDGSIGSSGGRENASTVLSQIVASIQPPQSPPETPQSAPKSCSVEELYSLPPEGDATKNTLVRPKSLFTSQPEAESSKMESTAIKMQKDPLSQPAATPSPKPARATPSVTSPQAEQAPPFPPPRSTSSPYHASNLLQRHFSNWAKPNSPTRSTEAESILHSEGRRPDAKPKRWISFKSFFRRRKADDEEEREKEREKGKLVGLDGTVIHMLPPPPVQRHHWFSEAKSDSSEKPSIVFMYRCDPAQAEPRADLPHQAGLDSAIAEALAKDKGETQEKPPESLEQNIAGHSSPPQAPKKIPSTPEHCGINGSPEFQDMIKRLKKALKEFPLMGNCVSEYSGQVPDEPALEELSPRVPRAVFVKQDNGGSASVIPVSSARAPPAEEEKEEAPRSPDLSTCSATYSNLGQSRAAMIPPKQPRQPKGALDDAIAFGGLTDQETANNLQPTPPPLPKKTILRANTEPTPRDLQKQALENNLCIMANPTYDIDTNWEASSACSSVSLELKVLDNESGDSLDRPTEKLRAATSATNSVSSLTTLSVKERCSNSMESLTGRRLSQAKQGRGVQKPQRQALYRGIENREEVVGKIRSLHADSLKKLALRCEDLFMAGQKDQLRFGVDSWSDFRLTSDKPCCEAGDAVYYPASYAKDPLNNYAVKICKSKAKESQQYYHSLSIRQSLAINFNIQQDCGHFLAEVPVRLLPWEDDDAPDVEEEREEEEKEAEQKNRDAASSPEASRRDSPSSQGTISKPRSRVVVITREVPQLTVADFVRESAPRHSKSPDLYERQVCLLLLQLCLGLEHLKPYHITHCDLRLENLLLVHSRPGGSTLGPEATEPNPNTACPARLIVSNFSQAKQKSHMVDPEVLRDQSRLAPEIITATQYKKCDEFQTGILIYEMLHLPNPFDENPELKEKEYTCADLPKIPCRSLYSQGLQQLASCLLNPNPSERILISEAKGILQCLLWGPREDLFLALSTSSNPSRRDAILQNWLDIKRTLLMIKFAEKSLERDCGIILEDWLCCQYLAFATTDSLHRIVMRLMKQH
SIO_010081: PEAK1
subclass of: SO_0000673
so part of: PEAK1
location: complement(join(1228270..1229427,1238260..1239008,1246181..1246377,1248147..1248263,1254562..1257713))
location: region:1228270-1257713:-1
so has part: feature:1254562-1257713:-1:exon
so has part: feature:1248147-1248263:-1:exon
so has part: feature:1246181-1246377:-1:exon
so has part: feature:1238260-1239008:-1:exon
so has part: feature:1228270-1229427:-1:exon

XP_021399092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1254562-1257713:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1248147-1248263:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1246181-1246377:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1238260-1239008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1228270-1229427:-1:exon

PEAK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PEAK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive tyrosine-protein kinase PEAK1 isoform X1
translation: MSACNTFTEHVWKPGECKNCFKPKSLHQLPPVSEKKPLSHGNLKPNANQSSSQRGRGSGSFRPPVAKKPTIAVKPTMMVADGLCWELTTLEQCENKPLPVGWNRNKAVLSKKPLNNNNEEEIEGYSHVPRPYGNSEGVGKIPSNNNNGLTEVLKEIAGLDTTPQLTGNETNSRETFLGRINNCYKRSLERKIPPSCMVAGMKDSQSKHVILSGSTEVISNEGGRFCYPELSSGDESEDDTFFGSMQEEHESWDESDEELLAMEIRMRGQPRFANFRANTLSPVPFCVDKKWNTVPLRNKSLQRICAVDYDDSYDEILNGYGEETVILYGQESMQSMVSSDSTSPDSSLTEESRSGTTSSSSQKLCNGGLSPSTPQDLKVIEPEYESLCDNQQVKDVPKAPRNALKSQETHKAVLALRLEEKDGKIAVQTDTQENKSSSDAAGQAVTINLVPMEEQAKPYRVVNMEQPVCKPYTVVDVSAAMTSECKENQTETSETKKAASNPSSPVTPGTPIASSAASPVHVHANLKKSSAIRYQEVWTSSTSPRQKIPKVELIGNSSGPSVPPRKTSHKSAPTSPTATNVSSKTIPVKSPNLSEIKFNSYNNAGMPPFPIIIHDEPTYARSSKNAVKVPIVINPNAYDNLAIYKSFLGTTGELSVKDKTTSVISHTYEEIETETKGTEAIGSKSTELPQARGVASSSECRLGSVAQKVQEFNSCLTKSQISPQRSHSADHSSPSRVQKAMQEPTAKADITPDGSIGSSGGRENASTVLSQIVASIQPPQSPPETPQSAPKSCSVEELYSLPPEGDATKNTLVRPKSLFTSQPEAESSKMESTAIKMQKDPLSQPAATPSPKPARATPSVTSPQAEQAPPFPPPRSTSSPYHASNLLQRHFSNWAKPNSPTRSTEAESILHSEGRRPDAKPKRWISFKSFFRRRKADDEEEREKEREKGKLVGLDGTVIHMLPPPPVQRHHWFSEAKSDSSEKPSIVFMYRCDPAQAEPRADLPHQAGLDSAIAEALAKDKGETQEKPPESLEQNIAGHSSPPQAPKKIPSTPEHCGINGSPEFQDMIKRLKKALKEFPLMGNCVSEYSGQVPDEPALEELSPRVPRAVFVKQDNGGSASVIPVSSARAPPAEEEKEEAPRSPDLSTCSATYSNLGQSRAAMIPPKQPRQPKGALDDAIAFGGLTDQETANNLQPTPPPLPKKTILRANTEPTPRDLQKQALENNLCIMANPTYDIDTNWEASSACSSVSLELKVLDNESGDSLDRPTEKLRAATSATNSVSSLTTLSVKERCSNSMESLTGRRLSQAKQGRGVQKPQRQALYRGIENREEVVGKIRSLHADSLKKLALRCEDLFMAGQKDQLRFGVDSWSDFRLTSDKPCCEAGDAVYYPASYAKDPLNNYAVKICKSKAKESQQYYHSLSIRQSLAINFNIQQDCGHFLAEVPVRLLPWEDDDAPDVEEEREEEEKEAEQKNRDAASSPEASRRDSPSSQGTISKPRSRVVVITREVPQLTVADFVRESAPRHSKSPDLYERQVCLLLLQLCLGLEHLKPYHITHCDLRLENLLLVHSRPGGSTLGPEATEPNPNTACPARLIVSNFSQAKQKSHMVDPEVLRDQSRLAPEIITATQYKKCDEFQTGILIYEMLHLPNPFDENPELKEKEYTCADLPKIPCRSLYSQGLQQLASCLLNPNPSERILISEAKGILQCLLWGPREDLFLALSTSSNPSRRDAILQNWLDIKRTLLMIKFAEKSLERDCGIILEDWLCCQYLAFATTDSLHRIVMRLMKQH
SIO_010081: PEAK1
subclass of: SO_0000673
so part of: PEAK1
location: complement(join(1228270..1229427,1238260..1239008,1246181..1246377,1248147..1248263,1254562..1257713))
location: region:1228270-1257713:-1
so has part: feature:1254562-1257713:-1:exon
so has part: feature:1248147-1248263:-1:exon
so has part: feature:1246181-1246377:-1:exon
so has part: feature:1238260-1239008:-1:exon
so has part: feature:1228270-1229427:-1:exon

XP_021399093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1254562-1257713:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1248147-1248263:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1246181-1246377:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1238260-1239008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1228270-1229427:-1:exon

PEAK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PEAK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive tyrosine-protein kinase PEAK1 isoform X1
translation: MSACNTFTEHVWKPGECKNCFKPKSLHQLPPVSEKKPLSHGNLKPNANQSSSQRGRGSGSFRPPVAKKPTIAVKPTMMVADGLCWELTTLEQCENKPLPVGWNRNKAVLSKKPLNNNNEEEIEGYSHVPRPYGNSEGVGKIPSNNNNGLTEVLKEIAGLDTTPQLTGNETNSRETFLGRINNCYKRSLERKIPPSCMVAGMKDSQSKHVILSGSTEVISNEGGRFCYPELSSGDESEDDTFFGSMQEEHESWDESDEELLAMEIRMRGQPRFANFRANTLSPVPFCVDKKWNTVPLRNKSLQRICAVDYDDSYDEILNGYGEETVILYGQESMQSMVSSDSTSPDSSLTEESRSGTTSSSSQKLCNGGLSPSTPQDLKVIEPEYESLCDNQQVKDVPKAPRNALKSQETHKAVLALRLEEKDGKIAVQTDTQENKSSSDAAGQAVTINLVPMEEQAKPYRVVNMEQPVCKPYTVVDVSAAMTSECKENQTETSETKKAASNPSSPVTPGTPIASSAASPVHVHANLKKSSAIRYQEVWTSSTSPRQKIPKVELIGNSSGPSVPPRKTSHKSAPTSPTATNVSSKTIPVKSPNLSEIKFNSYNNAGMPPFPIIIHDEPTYARSSKNAVKVPIVINPNAYDNLAIYKSFLGTTGELSVKDKTTSVISHTYEEIETETKGTEAIGSKSTELPQARGVASSSECRLGSVAQKVQEFNSCLTKSQISPQRSHSADHSSPSRVQKAMQEPTAKADITPDGSIGSSGGRENASTVLSQIVASIQPPQSPPETPQSAPKSCSVEELYSLPPEGDATKNTLVRPKSLFTSQPEAESSKMESTAIKMQKDPLSQPAATPSPKPARATPSVTSPQAEQAPPFPPPRSTSSPYHASNLLQRHFSNWAKPNSPTRSTEAESILHSEGRRPDAKPKRWISFKSFFRRRKADDEEEREKEREKGKLVGLDGTVIHMLPPPPVQRHHWFSEAKSDSSEKPSIVFMYRCDPAQAEPRADLPHQAGLDSAIAEALAKDKGETQEKPPESLEQNIAGHSSPPQAPKKIPSTPEHCGINGSPEFQDMIKRLKKALKEFPLMGNCVSEYSGQVPDEPALEELSPRVPRAVFVKQDNGGSASVIPVSSARAPPAEEEKEEAPRSPDLSTCSATYSNLGQSRAAMIPPKQPRQPKGALDDAIAFGGLTDQETANNLQPTPPPLPKKTILRANTEPTPRDLQKQALENNLCIMANPTYDIDTNWEASSACSSVSLELKVLDNESGDSLDRPTEKLRAATSATNSVSSLTTLSVKERCSNSMESLTGRRLSQAKQGRGVQKPQRQALYRGIENREEVVGKIRSLHADSLKKLALRCEDLFMAGQKDQLRFGVDSWSDFRLTSDKPCCEAGDAVYYPASYAKDPLNNYAVKICKSKAKESQQYYHSLSIRQSLAINFNIQQDCGHFLAEVPVRLLPWEDDDAPDVEEEREEEEKEAEQKNRDAASSPEASRRDSPSSQGTISKPRSRVVVITREVPQLTVADFVRESAPRHSKSPDLYERQVCLLLLQLCLGLEHLKPYHITHCDLRLENLLLVHSRPGGSTLGPEATEPNPNTACPARLIVSNFSQAKQKSHMVDPEVLRDQSRLAPEIITATQYKKCDEFQTGILIYEMLHLPNPFDENPELKEKEYTCADLPKIPCRSLYSQGLQQLASCLLNPNPSERILISEAKGILQCLLWGPREDLFLALSTSSNPSRRDAILQNWLDIKRTLLMIKFAEKSLERDCGIILEDWLCCQYLAFATTDSLHRIVMRLMKQH
SIO_010081: PEAK1
subclass of: SO_0000673
so part of: PEAK1
location: complement(join(1228270..1229427,1238260..1239008,1246181..1246377,1248147..1248263,1254562..1257713))
location: region:1228270-1257713:-1
so has part: feature:1254562-1257713:-1:exon
so has part: feature:1248147-1248263:-1:exon
so has part: feature:1246181-1246377:-1:exon
so has part: feature:1238260-1239008:-1:exon
so has part: feature:1228270-1229427:-1:exon

XP_021399094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1254562-1257713:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1248147-1248263:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1246181-1246377:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1238260-1239008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1228270-1229427:-1:exon

LOC116184013
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116184013
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1267522..1294694
location: region:1267522-1294694:1
so has part: feature:1267522-1294694:1:exon
subclass of: SO_0000011

116184013
type: Gene
SIO_000068: ncbigene

position:1267522:1
position: 1267522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1294694:1
position: 1294694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1267522-1294694:1:exon

LOC116184013
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC116184013
product: uncharacterized LOC116184013, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004148731.1
SIO_010081: LOC116184013
subclass of: SO_0000673
so part of: LOC116184013
location: join(1267522..1267904,1270386..1270456,1271211..1271282,1294597..1294694)
location: region:1267522-1294694:1
so has part: feature:1267522-1267904:1:exon
so has part: feature:1270386-1270456:1:exon
so has part: feature:1271211-1271282:1:exon
so has part: feature:1294597-1294694:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1267522-1267904:1:exon

position:1267904:1
position: 1267904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1270386-1270456:1:exon

position:1270386:1
position: 1270386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1270456:1
position: 1270456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1271211-1271282:1:exon

position:1271211:1
position: 1271211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1271282:1
position: 1271282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1294597-1294694:1:exon

position:1294597:1
position: 1294597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116184013
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC116184013
product: uncharacterized LOC116184013, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004148730.1
SIO_010081: LOC116184013
subclass of: SO_0000673
so part of: LOC116184013
location: join(1267522..1267904,1270386..1270456,1271211..1271282,1278133..1278174)
location: region:1267522-1278174:1
so has part: feature:1267522-1267904:1:exon
so has part: feature:1270386-1270456:1:exon
so has part: feature:1271211-1271282:1:exon
so has part: feature:1278133-1278174:1:exon

position:1278174:1
position: 1278174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1267522-1267904:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1270386-1270456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1271211-1271282:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1278133-1278174:1:exon

position:1278133:1
position: 1278133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HMG20A
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: HMG20A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1332892..1388976
location: region:1332892-1388976:1
so has part: feature:1332892-1388976:1:exon
subclass of: SO_0000010

110480270
type: Gene
SIO_000068: ncbigene

position:1332892:1
position: 1332892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1388976:1
position: 1388976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1332892-1388976:1:exon

HMG20A
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 299123
gene: HMG20A
product: high mobility group 20A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004148732.1
SIO_010081: HMG20A
so part of: HMG20A
location: join(1332892..1333145,1334642..1334759,1361405..1361497,1363575..1363722,1365075..1365290,1367402..1367534,1367916..1367947,1372106..1372181,1373012..1373227,1373861..1374004,1376294..1376387,1387787..1388976)
location: region:1332892-1388976:1
so has part: feature:1332892-1333145:1:exon
so has part: feature:1334642-1334759:1:exon
so has part: feature:1361405-1361497:1:exon
so has part: feature:1363575-1363722:1:exon
so has part: feature:1365075-1365290:1:exon
so has part: feature:1367402-1367534:1:exon
so has part: feature:1367916-1367947:1:exon
so has part: feature:1372106-1372181:1:exon
so has part: feature:1373012-1373227:1:exon
so has part: feature:1373861-1374004:1:exon
so has part: feature:1376294-1376387:1:exon
so has part: feature:1387787-1388976:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1332892-1333145:1:exon

position:1333145:1
position: 1333145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1334642-1334759:1:exon

position:1334642:1
position: 1334642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1334759:1
position: 1334759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1361405-1361497:1:exon

position:1361405:1
position: 1361405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1361497:1
position: 1361497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1363575-1363722:1:exon

position:1363575:1
position: 1363575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1363722:1
position: 1363722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1365075-1365290:1:exon

position:1365075:1
position: 1365075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1365290:1
position: 1365290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1367402-1367534:1:exon

position:1367402:1
position: 1367402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1367534:1
position: 1367534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1367916-1367947:1:exon

position:1367916:1
position: 1367916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1367947:1
position: 1367947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1372106-1372181:1:exon

position:1372106:1
position: 1372106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1372181:1
position: 1372181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1373012-1373227:1:exon

position:1373012:1
position: 1373012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1373227:1
position: 1373227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1373861-1374004:1:exon

position:1373861:1
position: 1373861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1374004:1
position: 1374004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1376294-1376387:1:exon

position:1376294:1
position: 1376294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1376387:1
position: 1376387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1387787-1388976:1:exon

position:1387787:1
position: 1387787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HMG20A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: HMG20A
product: high mobility group 20A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_031505766.1
SIO_010081: HMG20A
subclass of: SO_0000673
so part of: HMG20A
location: join(1332892..1333145,1334642..1334759,1361405..1361497,1363575..1363722,1365075..1365290,1367402..1367534,1367916..1367947,1372106..1372181,1373012..1373227,1373861..1374004,1376294..1376673)
location: region:1332892-1376673:1
so has part: feature:1332892-1333145:1:exon
so has part: feature:1334642-1334759:1:exon
so has part: feature:1361405-1361497:1:exon
so has part: feature:1363575-1363722:1:exon
so has part: feature:1365075-1365290:1:exon
so has part: feature:1367402-1367534:1:exon
so has part: feature:1367916-1367947:1:exon
so has part: feature:1372106-1372181:1:exon
so has part: feature:1373012-1373227:1:exon
so has part: feature:1373861-1374004:1:exon
so has part: feature:1376294-1376673:1:exon

position:1376673:1
position: 1376673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1332892-1333145:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1334642-1334759:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1361405-1361497:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1363575-1363722:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1365075-1365290:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1367402-1367534:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1367916-1367947:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1372106-1372181:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1373012-1373227:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1373861-1374004:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1376294-1376673:1:exon

HMG20A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: HMG20A
product: high mobility group 20A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_031505767.1
SIO_010081: HMG20A
subclass of: SO_0000673
so part of: HMG20A
location: join(1332892..1333145,1361405..1361497,1363575..1363722,1365075..1365290,1367402..1367534,1367916..1367947,1372106..1372181,1373012..1373227,1373861..1374004,1376294..1376673)
location: region:1332892-1376673:1
so has part: feature:1332892-1333145:1:exon
so has part: feature:1361405-1361497:1:exon
so has part: feature:1363575-1363722:1:exon
so has part: feature:1365075-1365290:1:exon
so has part: feature:1367402-1367534:1:exon
so has part: feature:1367916-1367947:1:exon
so has part: feature:1372106-1372181:1:exon
so has part: feature:1373012-1373227:1:exon
so has part: feature:1373861-1374004:1:exon
so has part: feature:1376294-1376673:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1332892-1333145:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1361405-1361497:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1363575-1363722:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1365075-1365290:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1367402-1367534:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1367916-1367947:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1372106-1372181:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1373012-1373227:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1373861-1374004:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1376294-1376673:1:exon

HMG20A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: HMG20A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: high mobility group protein 20A
translation: MENLVAGSNLPPLFTDEDGSKEGTEINVTGLANSESSFSGGTSQPVNNPDLVEDLSQAQQQQNETSNAAETTEQKPEEEQQRTKRGGWAKGRKRKKPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKRRYLDEADRDKERYMRELEQYQKTEAYKVFSRKAQDRQKGKSHRQDGARQPAHDHEKEADTKERSVFDIPIFTEEFLNHSKAREAELRQLRKSNMEFEERNAALQKHVESMRTAVEKLEVDVIQERSRNTVLQQHLETLRQALTSSFAGVPLPGSGETPTMETIDSYMNRLHSIILANPQENENLIATVRDVVNRLER
SIO_010081: HMG20A
subclass of: SO_0000673
so part of: HMG20A
location: join(1361409..1361497,1363575..1363722,1365075..1365290,1367402..1367534,1367916..1367947,1372106..1372181,1373012..1373227,1373861..1373997)
location: region:1361409-1373997:1
so has part: feature:1361409-1361497:1:exon
so has part: feature:1363575-1363722:1:exon
so has part: feature:1365075-1365290:1:exon
so has part: feature:1367402-1367534:1:exon
so has part: feature:1367916-1367947:1:exon
so has part: feature:1372106-1372181:1:exon
so has part: feature:1373012-1373227:1:exon
so has part: feature:1373861-1373997:1:exon

XP_031361626.1
type: Protein
SIO_000068: ncbiprotein

position:1361409:1
position: 1361409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1373997:1
position: 1373997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1361409-1361497:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1363575-1363722:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1365075-1365290:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1367402-1367534:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1367916-1367947:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1372106-1372181:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1373012-1373227:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1373861-1373997:1:exon

HMG20A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: HMG20A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: high mobility group protein 20A
translation: MENLVAGSNLPPLFTDEDGSKEGTEINVTGLANSESSFSGGTSQPVNNPDLVEDLSQAQQQQNETSNAAETTEQKPEEEQQRTKRGGWAKGRKRKKPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKRRYLDEADRDKERYMRELEQYQKTEAYKVFSRKAQDRQKGKSHRQDGARQPAHDHEKEADTKERSVFDIPIFTEEFLNHSKAREAELRQLRKSNMEFEERNAALQKHVESMRTAVEKLEVDVIQERSRNTVLQQHLETLRQALTSSFAGVPLPGSGETPTMETIDSYMNRLHSIILANPQENENLIATVRDVVNRLER
SIO_010081: HMG20A
subclass of: SO_0000673
so part of: HMG20A
location: join(1361409..1361497,1363575..1363722,1365075..1365290,1367402..1367534,1367916..1367947,1372106..1372181,1373012..1373227,1373861..1373997)
location: region:1361409-1373997:1
so has part: feature:1361409-1361497:1:exon
so has part: feature:1363575-1363722:1:exon
so has part: feature:1365075-1365290:1:exon
so has part: feature:1367402-1367534:1:exon
so has part: feature:1367916-1367947:1:exon
so has part: feature:1372106-1372181:1:exon
so has part: feature:1373012-1373227:1:exon
so has part: feature:1373861-1373997:1:exon

XP_031361627.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1361409-1361497:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1363575-1363722:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1365075-1365290:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1367402-1367534:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1367916-1367947:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1372106-1372181:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1373012-1373227:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1373861-1373997:1:exon

LINGO1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LINGO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1511643..1586126)
location: region:1511643-1586126:-1
so has part: feature:1511643-1586126:-1:exon
subclass of: SO_0000010

110480271
type: Gene
SIO_000068: ncbigene

position:1511643:-1
position: 1511643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1586126:-1
position: 1586126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1511643-1586126:-1:exon

LINGO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LINGO1
product: leucine rich repeat and Ig domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 40 ESTs, 15 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_031505768.1
SIO_010081: LINGO1
subclass of: SO_0000673
so part of: LINGO1
location: complement(join(1511643..1513929,1586042..1586126))
location: region:1511643-1586126:-1
so has part: feature:1586042-1586126:-1:exon
so has part: feature:1511643-1513929:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1586042-1586126:-1:exon

position:1586042:-1
position: 1586042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1511643-1513929:-1:exon

position:1513929:-1
position: 1513929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LINGO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LINGO1
product: leucine rich repeat and Ig domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 42 ESTs, 15 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_021548101.2
SIO_010081: LINGO1
subclass of: SO_0000673
so part of: LINGO1
location: complement(join(1511643..1513929,1527760..1527909))
location: region:1511643-1527909:-1
so has part: feature:1527760-1527909:-1:exon
so has part: feature:1511643-1513929:-1:exon

position:1527909:-1
position: 1527909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1527760-1527909:-1:exon

position:1527760:-1
position: 1527760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1511643-1513929:-1:exon

LINGO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LINGO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 isoform X1
translation: MRVRDRMVAGEASMRSPILACWQPILLLMLGSILSGSATGCPPRCECSAQERAVLCHRKRFMVVPEGIPTETRLLDLGKNRIKTLNQDEFANYPHLEELELNENIISAIEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINTIRDYSFKRLYRLKVLEISHWPYLDTMTSNCLYGLNLTSLSITHCNLTSIPYVSVRHLVYLRFLNLSYNPIVTIEGSMLHDLLRLQEIQLVGGQLTTVEPFAFRGLNYLRILNVSGNLLTTLEESAFHSVGNLETLILDNNPLACDCRLLWVFRRRWRLNFNKQQPTCSTPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKPQQIFVDEGHTVHFVCRADGDPPPTIMWLSPRKHLISTKTNGRLTVFPDGTLEVRYAQIQDNGTYLCIASNAGGNDTMLAHLHVRSYSPDWPHQPNKTFAFISNQPNESDANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGISSADAPRKFNMKMI
SIO_010081: LINGO1
subclass of: SO_0000673
so part of: LINGO1
location: complement(join(1512076..1513929,1527760..1527765))
location: region:1512076-1527765:-1
so has part: feature:1527760-1527765:-1:exon
so has part: feature:1512076-1513929:-1:exon

XP_021403776.1
type: Protein
SIO_000068: ncbiprotein

position:1512076:-1
position: 1512076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1527765:-1
position: 1527765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1527760-1527765:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1512076-1513929:-1:exon

LINGO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LINGO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 isoform X2
translation: MVAGEASMRSPILACWQPILLLMLGSILSGSATGCPPRCECSAQERAVLCHRKRFMVVPEGIPTETRLLDLGKNRIKTLNQDEFANYPHLEELELNENIISAIEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINTIRDYSFKRLYRLKVLEISHWPYLDTMTSNCLYGLNLTSLSITHCNLTSIPYVSVRHLVYLRFLNLSYNPIVTIEGSMLHDLLRLQEIQLVGGQLTTVEPFAFRGLNYLRILNVSGNLLTTLEESAFHSVGNLETLILDNNPLACDCRLLWVFRRRWRLNFNKQQPTCSTPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKPQQIFVDEGHTVHFVCRADGDPPPTIMWLSPRKHLISTKTNGRLTVFPDGTLEVRYAQIQDNGTYLCIASNAGGNDTMLAHLHVRSYSPDWPHQPNKTFAFISNQPNESDANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGISSADAPRKFNMKMI
SIO_010081: LINGO1
subclass of: SO_0000673
so part of: LINGO1
location: complement(1512076..1513917)
location: region:1512076-1513917:-1
so has part: feature:1512076-1513917:-1:exon

XP_031361628.1
type: Protein
SIO_000068: ncbiprotein

position:1513917:-1
position: 1513917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1512076-1513917:-1:exon

LOC110479822
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110479822
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1629995..1684309)
location: region:1629995-1684309:-1
so has part: feature:1629995-1684309:-1:exon
subclass of: SO_0000011

110479822
type: Gene
SIO_000068: ncbigene

position:1629995:-1
position: 1629995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1684309:-1
position: 1684309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1629995-1684309:-1:exon

LOC110479822
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110479822
product: uncharacterized LOC110479822
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004148733.1
SIO_010081: LOC110479822
subclass of: SO_0000673
so part of: LOC110479822
location: complement(join(1629995..1632227,1669377..1669527,1684266..1684309))
location: region:1629995-1684309:-1
so has part: feature:1684266-1684309:-1:exon
so has part: feature:1669377-1669527:-1:exon
so has part: feature:1629995-1632227:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1684266-1684309:-1:exon

position:1684266:-1
position: 1684266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1669377-1669527:-1:exon

position:1669377:-1
position: 1669377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1669527:-1
position: 1669527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1629995-1632227:-1:exon

position:1632227:-1
position: 1632227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CSPG4
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: CSPG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1741026..1754097
location: region:1741026-1754097:1
so has part: feature:1741026-1754097:1:exon
subclass of: SO_0000010

110479820
type: Gene
SIO_000068: ncbigene

position:1741026:1
position: 1741026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1754097:1
position: 1754097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1741026-1754097:1:exon

CSPG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: CSPG4
product: chondroitin sulfate proteoglycan 4
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 10 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031505769.1
SIO_010081: CSPG4
subclass of: SO_0000673
so part of: CSPG4
location: join(1741026..1741310,1742321..1745899,1746197..1746676,1747051..1747227,1750008..1750206,1750331..1750465,1750617..1750771,1751562..1751745,1751942..1754097)
location: region:1741026-1754097:1
so has part: feature:1741026-1741310:1:exon
so has part: feature:1742321-1745899:1:exon
so has part: feature:1746197-1746676:1:exon
so has part: feature:1747051-1747227:1:exon
so has part: feature:1750008-1750206:1:exon
so has part: feature:1750331-1750465:1:exon
so has part: feature:1750617-1750771:1:exon
so has part: feature:1751562-1751745:1:exon
so has part: feature:1751942-1754097:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1741026-1741310:1:exon

position:1741310:1
position: 1741310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1742321-1745899:1:exon

position:1742321:1
position: 1742321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1745899:1
position: 1745899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1746197-1746676:1:exon

position:1746197:1
position: 1746197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1746676:1
position: 1746676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1747051-1747227:1:exon

position:1747051:1
position: 1747051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1747227:1
position: 1747227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1750008-1750206:1:exon

position:1750008:1
position: 1750008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1750206:1
position: 1750206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1750331-1750465:1:exon

position:1750331:1
position: 1750331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1750465:1
position: 1750465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1750617-1750771:1:exon

position:1750617:1
position: 1750617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1750771:1
position: 1750771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1751562-1751745:1:exon

position:1751562:1
position: 1751562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1751745:1
position: 1751745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1751942-1754097:1:exon

position:1751942:1
position: 1751942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CSPG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: CSPG4
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:1741071..1741073,aa:OTHER)
product: LOW QUALITY PROTEIN: chondroitin sulfate proteoglycan 4
translation: MANKGRADGWARETPXSQHPRGGACRRCPSLPDLSAFSPASFFGDSFVEMPLADASRTVRLHLQLFTSQGNGLLFLAAGQPDHLLLQLQAGRLQARLQLGLEEVTLQSPAGLQLDNLAVHDVELLVEDGRMTLTIDGHFNSSTDIAGPARELDIQYGLYAGGTGRLDLPYLAEASPPFRGCLHLVTFNGLDVLSHLSADGSSKTFHHVQEGCSTQFSAEPEDPFGFPGPHSYIAFPTWDARQEATIEFVITTSITQAPLIYHAGLENDFFYLEISNGRLRGFVEKGNGVIVLHNNVFISDEQQHYVKVHTDIHKFEILIDYYASSTSNRGINNYLDLQGNLFIGGMDEKALQRLREHHLSFISLWTMSNHSFVGCLEDLRINLQRRSLQDAVITKDITAGCGKQDHYWDYEEVYEQDEASTSPPPNGFSGAPGLVVEPCRPDSSFPPAFANISRLLHVSPLVVSEGGMAYLEWKHAQPTVDLSVANIRQSQILFSITSDPRHGQLELDIPGSRSRRKFTLLDIVNRKVRYIHDGSEGPMDQLMLEVTVTTQRGVPECLRQGQVYLLPIMINPVNDAPQVIFPRGNHITVLRHTRKHLTTDILQVLDDDSSCDDLEFQLHGQQVEEGYVELDFHPGVPIEEFSCRDLEAGNVVYVHQGGTNLQLTLQVSDGTIPSPIATLRILAIDPDIRLLNNTGLSLSQGGAARITTANLSVETNAVEQRVSILYVLTEPLKYGEVQKQGSMGGEWKKVESFHQQDLEQGRIQYFSTDPGHRLEDSVEEVRFKVQVGQKLLPNNTFLIRIKRATIKMRTMAPLQMKNKRHRNITSKELEAMLEDPNSAPVPFHYVIIQAPKKGNLELLGNRLTEGFGFTEEDLQDNRLSYSVTIRNSQQAEDFFQFRVHAGEQHSPVYTYRISIGGDPDAPNLTNVLLTVLEGGQAVISKDHLFVQSVNSMDYVYEVIEGPAHGRLAWAASHGWASREEITEFTNDDILQRRLLYQHDDSETLEDDIPFVAIRQGEGSAESEAEEVRGVFRVSIQPVNDHSPVRAVNRVFNVVRNGQHLLTTDHIAFTDKDSGFSDAQLVLTRKDILFGSIVSVDDRSHQVYRFTQDDLRKKKILFVHSGADRGWIQLQVSDGLHQTTALLEVQASDPYIKIVNNTGLVIHQGTQGSIDSSVLSLETNMDIRSDEEIRFLITTPPRWGTVLRGEQPVMAFSQRDLLAGEISYHHNGSRNTRDELQFTVEANEVAVEDTLAISVFLDTHPSPLSIVNHKEIYVFQGEAAGIKEEDLMVTHEEIPSQDIVYMVINPPASGFLAMLQHSQDVNEQPSLDPIQSFTQEDINSGRVLYLHSKPNEERDQFVLDVTARSADPLEGVVVSLVVLPITVPLDVHNITVPGGGSAAISSSILRIPNAYYPTLGVEFRVLEPPRFGTLLSSQRPEQGGLHSFTWSEVENQQIQYRQDGPRSLTDSFTILANATEVSRQSHPRTLFISILPRSTKAPRLKVNAGLQLREGATAVLSPHILSAEDEDSPAEEVTYSIQPPANGRVVLRSAPGAELQRFTQAQIDSGLVLFVHQGPLDGGFAFDLWDGENLSPGHFFLIRAQREPVISLARKQSLTVCPGALEPITSQNLQAVSNSPTSSTTLYYSIEQAPRLGRLTTSQGEEIRNFTQAQVDSKLIFYQHEMPGKPFWLAQDAIRFRVVTPTTISDSFILLVLISFEENCPQRLTQLWKNEGLQLTRAQQAEIDTSVLDASNLLSQILVTERAGYDVVFLVTEPPTHGQLLVAGVPLEQSRPFFLQSELAARRLVYAHGGDSVSKDHFSFKAWLQPQEQRSVRPPQDGVVISEAFNVTVTSSTVPPRVVKRQEVLQVPPGSVVTLSQEYLDVADPLVAPQEMVYSVLQRPLAGHVASAHRPREPISRFTQADVNAGRVVFVATGSRAPGSLALRLSSGHHPPIQTSLEVEVLPALSTTASPALLEVPQDLNRAPVSQHHLLGAAPRGAGNV…
SIO_010081: CSPG4
subclass of: SO_0000673
so part of: CSPG4
location: join(1741026..1741310,1742321..1745899,1746197..1746676,1747051..1747227,1750008..1750206,1750331..1750465,1750617..1750771,1751562..1751745,1751942..1753833)
location: region:1741026-1753833:1
so has part: feature:1741026-1741310:1:exon
so has part: feature:1742321-1745899:1:exon
so has part: feature:1746197-1746676:1:exon
so has part: feature:1747051-1747227:1:exon
so has part: feature:1750008-1750206:1:exon
so has part: feature:1750331-1750465:1:exon
so has part: feature:1750617-1750771:1:exon
so has part: feature:1751562-1751745:1:exon
so has part: feature:1751942-1753833:1:exon

XP_031361629.1
type: Protein
SIO_000068: ncbiprotein

position:1753833:1
position: 1753833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1741026-1741310:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1742321-1745899:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1746197-1746676:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1747051-1747227:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1750008-1750206:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1750331-1750465:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1750617-1750771:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1751562-1751745:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1751942-1753833:1:exon

SNX33
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SNX33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1760986..1765681)
location: region:1760986-1765681:-1
so has part: feature:1760986-1765681:-1:exon
subclass of: SO_0000010

110479813
type: Gene
SIO_000068: ncbigene

position:1760986:-1
position: 1760986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1765681:-1
position: 1765681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1760986-1765681:-1:exon

SNX33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SNX33
product: sorting nexin 33
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021547331.2
SIO_010081: SNX33
subclass of: SO_0000673
so part of: SNX33
location: complement(join(1760986..1761779,1763673..1765681))
location: region:1760986-1765681:-1
so has part: feature:1763673-1765681:-1:exon
so has part: feature:1760986-1761779:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1763673-1765681:-1:exon

position:1763673:-1
position: 1763673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1760986-1761779:-1:exon

position:1761779:-1
position: 1761779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SNX33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SNX33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-33
translation: MALKARALYNFQSENKEEISIQENEELVIFSENSLDGWLQGQNSRGETGLFPASYVEILRSRSGSNYTDYSSSPVGSPGHDSSLYSASPNPGISYQGSFEDDDDDDWDDWDDACTVVEEPRSAPGTNGHPSPSPYPAAYGHHQHAGYRPKPALERQDSMSSSKRGSVVGRNLNRFSCFVRSGVEAFILGDVPLMSKIAETYFIEMGSRGPQWRANPHPFICSVEDPTKQTKFKGIKSYISYKLTPSNFNSPVYRRYKHFDWLYNRLLHKFTVISVPHLPEKQATGRFEEDFIEKRKRRLILWMEHMTSHPVLSQYEGFQHFLCCRDEKQWKLGKRRAEKDEMVGASFLLTIQIPTEHQDLQDVEDRVDAFKAFSKKMDDSVLQLTNVASELVRKHVGGFRKEFQKLGNAFQAISHSFHMDPPYSLDALNNAISHTGKTYETVGEMFAEQPKNDLFLMLDTLSLYQGLLSNFPDIIHLQKGAFAKVKESQRMSDEGRMDQEEADGIRKRCRVVGFALQAEMNHFHERRVADFKRMMQSYLRQQIVFYQRVSQQLEKTLRMYDNL
SIO_010081: SNX33
subclass of: SO_0000673
so part of: SNX33
location: complement(join(1761526..1761779,1763673..1765110))
location: region:1761526-1765110:-1
so has part: feature:1763673-1765110:-1:exon
so has part: feature:1761526-1761779:-1:exon

XP_021403006.1
type: Protein
SIO_000068: ncbiprotein

position:1761526:-1
position: 1761526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1765110:-1
position: 1765110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1763673-1765110:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1761526-1761779:-1:exon

SNUPN
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SNUPN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1766248..1775263
location: region:1766248-1775263:1
so has part: feature:1766248-1775263:1:exon
subclass of: SO_0000010

110479815
type: Gene
SIO_000068: ncbigene

position:1766248:1
position: 1766248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1775263:1
position: 1775263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1766248-1775263:1:exon

SNUPN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SNUPN
product: snurportin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021547335.1
SIO_010081: SNUPN
subclass of: SO_0000673
so part of: SNUPN
location: join(1766248..1766399,1766778..1766934,1767735..1767839,1767930..1768026,1768899..1768996,1769284..1769361,1770442..1770522,1774218..1775263)
location: region:1766248-1775263:1
so has part: feature:1766248-1766399:1:exon
so has part: feature:1766778-1766934:1:exon
so has part: feature:1767735-1767839:1:exon
so has part: feature:1767930-1768026:1:exon
so has part: feature:1768899-1768996:1:exon
so has part: feature:1769284-1769361:1:exon
so has part: feature:1770442-1770522:1:exon
so has part: feature:1774218-1775263:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1766248-1766399:1:exon

position:1766399:1
position: 1766399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1766778-1766934:1:exon

position:1766778:1
position: 1766778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1766934:1
position: 1766934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1767735-1767839:1:exon

position:1767735:1
position: 1767735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1767839:1
position: 1767839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1767930-1768026:1:exon

position:1767930:1
position: 1767930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1768026:1
position: 1768026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1768899-1768996:1:exon

position:1768899:1
position: 1768899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1768996:1
position: 1768996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1769284-1769361:1:exon

position:1769284:1
position: 1769284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1769361:1
position: 1769361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1770442-1770522:1:exon

position:1770442:1
position: 1770442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1770522:1
position: 1770522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1774218-1775263:1:exon

position:1774218:1
position: 1774218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SNUPN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SNUPN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: snurportin-1
translation: MEELSAALAAGVGLAGPCSPAAPHPRLAAYKPRGGPGQAERRQRLLRIQRERRLDYVNHARRLAEDDWAGVESEDEDREGEDAEEEAMDVDAGKKLPKRYANQLMLSEWLVDVPSDLEQEWVVVVCPVGKRALVVASRGTTAAYTKSGFCVNRFPSLLPGGNRHNSTSDKVYSILDCIYNEAKQTFYILDVMCWRGHPVYDCQTDFRFFWLSSKIQEEEGLGEKSRINPYKFVGLQNFPCSSDSLCELLATDFPFEVDGLLFYHKQTHYTPGSTPLVGWLRPYMVPEILGLAVPATVLTAKPDYAGRQLQQIIESKRSKKLAAEKGCPGGEAAARNGHYELEHLSTPQPEKSLEGRDGAASQMES
SIO_010081: SNUPN
subclass of: SO_0000673
so part of: SNUPN
location: join(1766248..1766399,1766778..1766934,1767735..1767839,1767930..1768026,1768899..1768996,1769284..1769361,1770442..1770522,1774218..1774547)
location: region:1766248-1774547:1
so has part: feature:1766248-1766399:1:exon
so has part: feature:1766778-1766934:1:exon
so has part: feature:1767735-1767839:1:exon
so has part: feature:1767930-1768026:1:exon
so has part: feature:1768899-1768996:1:exon
so has part: feature:1769284-1769361:1:exon
so has part: feature:1770442-1770522:1:exon
so has part: feature:1774218-1774547:1:exon

XP_021403010.1
type: Protein
SIO_000068: ncbiprotein

position:1774547:1
position: 1774547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1766248-1766399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1766778-1766934:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1767735-1767839:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1767930-1768026:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1768899-1768996:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1769284-1769361:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1770442-1770522:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1774218-1774547:1:exon

PTPN9
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: PTPN9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1777244..1787916
location: region:1777244-1787916:1
so has part: feature:1777244-1787916:1:exon
subclass of: SO_0000010

110479821
type: Gene
SIO_000068: ncbigene

position:1777244:1
position: 1777244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1787916:1
position: 1787916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1777244-1787916:1:exon

PTPN9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PTPN9
product: protein tyrosine phosphatase non-receptor type 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021547342.1
SIO_010081: PTPN9
subclass of: SO_0000673
so part of: PTPN9
location: join(1777244..1777627,1781177..1781320,1781768..1781857,1781960..1782084,1782740..1782845,1783466..1783576,1783803..1784131,1784502..1784595,1784696..1784765,1785290..1785368,1785630..1785780,1785871..1786078,1786344..1787916)
location: region:1777244-1787916:1
so has part: feature:1777244-1777627:1:exon
so has part: feature:1781177-1781320:1:exon
so has part: feature:1781768-1781857:1:exon
so has part: feature:1781960-1782084:1:exon
so has part: feature:1782740-1782845:1:exon
so has part: feature:1783466-1783576:1:exon
so has part: feature:1783803-1784131:1:exon
so has part: feature:1784502-1784595:1:exon
so has part: feature:1784696-1784765:1:exon
so has part: feature:1785290-1785368:1:exon
so has part: feature:1785630-1785780:1:exon
so has part: feature:1785871-1786078:1:exon
so has part: feature:1786344-1787916:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1777244-1777627:1:exon

position:1777627:1
position: 1777627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1781177-1781320:1:exon

position:1781177:1
position: 1781177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1781320:1
position: 1781320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1781768-1781857:1:exon

position:1781768:1
position: 1781768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1781857:1
position: 1781857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1781960-1782084:1:exon

position:1781960:1
position: 1781960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1782084:1
position: 1782084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1782740-1782845:1:exon

position:1782740:1
position: 1782740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1782845:1
position: 1782845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1783466-1783576:1:exon

position:1783466:1
position: 1783466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1783576:1
position: 1783576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1783803-1784131:1:exon

position:1783803:1
position: 1783803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1784131:1
position: 1784131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1784502-1784595:1:exon

position:1784502:1
position: 1784502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1784595:1
position: 1784595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1784696-1784765:1:exon

position:1784696:1
position: 1784696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1784765:1
position: 1784765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1785290-1785368:1:exon

position:1785290:1
position: 1785290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1785368:1
position: 1785368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1785630-1785780:1:exon

position:1785630:1
position: 1785630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1785780:1
position: 1785780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1785871-1786078:1:exon

position:1785871:1
position: 1785871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1786078:1
position: 1786078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1786344-1787916:1:exon

position:1786344:1
position: 1786344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTPN9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PTPN9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein phosphatase non-receptor type 9
translation: MAAELSAEEEQATKQFLEEINKWTGQYNVSPLSWNVAVKFLMARKFDVLRAIELFHSYRETRLKEGIVKLKPHEEPLRSELLSGKFTILSVRDPSGASIALFTAKLHHPSKSVQHVVLQALFYLLDRAVESFETQRNGLVFIYDMAGSQYTNFELDLSKKILNLLKGAFPARLKKVFIVGAPMWFRVPYSIISLLLKEKLRERVQMVKMSELKDHLPRECLPEYLGGSLKLDPLSWNCRFLPQQNGHPDPLDELILVPLAAPKDNGSVHVPGPKSVTLQELLDHVSHKQKRGIYEEYEDIRRRSPAGTFICSLAPYNQDKNRYGDVPCLDQTRVKLAKPYSRPELTDYINASFMDGYKQRNAYIGTQGPLENTYGDFWRMVWEQNVLVIVMTTRLEEGGRRKCGQYWPLEKDFQVCFGALTITNLGVENLNHYKKTILEIHSSETRERRLVSHFQYLSWPDYGVPSSAATLIDFLGAVKQQQRVAVSALGPRFKGHPGGPPVVVHCSAGIGRTGTFCALDICLSQLQDVGTLNIYQTVLRMRTQRAFSIQTPEQYYFCYTAILEHAQREGLLLTNHSRAAQDKSSPGH
SIO_010081: PTPN9
subclass of: SO_0000673
so part of: PTPN9
location: join(1777595..1777627,1781177..1781320,1781768..1781857,1781960..1782084,1782740..1782845,1783466..1783576,1783803..1784131,1784502..1784595,1784696..1784765,1785290..1785368,1785630..1785780,1785871..1786078,1786344..1786570)
location: region:1777595-1786570:1
so has part: feature:1777595-1777627:1:exon
so has part: feature:1781177-1781320:1:exon
so has part: feature:1781768-1781857:1:exon
so has part: feature:1781960-1782084:1:exon
so has part: feature:1782740-1782845:1:exon
so has part: feature:1783466-1783576:1:exon
so has part: feature:1783803-1784131:1:exon
so has part: feature:1784502-1784595:1:exon
so has part: feature:1784696-1784765:1:exon
so has part: feature:1785290-1785368:1:exon
so has part: feature:1785630-1785780:1:exon
so has part: feature:1785871-1786078:1:exon
so has part: feature:1786344-1786570:1:exon

XP_021403017.1
type: Protein
SIO_000068: ncbiprotein

position:1777595:1
position: 1777595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1786570:1
position: 1786570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1777595-1777627:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1781177-1781320:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1781768-1781857:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1781960-1782084:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1782740-1782845:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1783466-1783576:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1783803-1784131:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1784502-1784595:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1784696-1784765:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1785290-1785368:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1785630-1785780:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1785871-1786078:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1786344-1786570:1:exon

SIN3A
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SIN3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1790724..1822887
location: region:1790724-1822887:1
so has part: feature:1790724-1822887:1:exon
subclass of: SO_0000010

110479814
type: Gene
SIO_000068: ncbigene

position:1790724:1
position: 1790724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1822887:1
position: 1822887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1790724-1822887:1:exon

SIN3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SIN3A
product: SIN3 transcription regulator family member A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 11 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021547334.2
SIO_010081: SIN3A
subclass of: SO_0000673
so part of: SIN3A
location: join(1790724..1790767,1799353..1799573,1800995..1801171,1802581..1802687,1803175..1803457,1805397..1805648,1806339..1806491,1807318..1807476,1808706..1808795,1810159..1810277,1811744..1811954,1813443..1813559,1814258..1814496,1815665..1815848,1816033..1816606,1817046..1817215,1818253..1818426,1819108..1819200,1819547..1819641,1819847..1820054,1821421..1822887)
location: region:1790724-1822887:1
so has part: feature:1790724-1790767:1:exon
so has part: feature:1799353-1799573:1:exon
so has part: feature:1800995-1801171:1:exon
so has part: feature:1802581-1802687:1:exon
so has part: feature:1803175-1803457:1:exon
so has part: feature:1805397-1805648:1:exon
so has part: feature:1806339-1806491:1:exon
so has part: feature:1807318-1807476:1:exon
so has part: feature:1808706-1808795:1:exon
so has part: feature:1810159-1810277:1:exon
so has part: feature:1811744-1811954:1:exon
so has part: feature:1813443-1813559:1:exon
so has part: feature:1814258-1814496:1:exon
so has part: feature:1815665-1815848:1:exon
so has part: feature:1816033-1816606:1:exon
so has part: feature:1817046-1817215:1:exon
so has part: feature:1818253-1818426:1:exon
so has part: feature:1819108-1819200:1:exon
so has part: feature:1819547-1819641:1:exon
so has part: feature:1819847-1820054:1:exon
so has part: feature:1821421-1822887:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1790724-1790767:1:exon

position:1790767:1
position: 1790767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1799353-1799573:1:exon

position:1799353:1
position: 1799353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1799573:1
position: 1799573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1800995-1801171:1:exon

position:1800995:1
position: 1800995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1801171:1
position: 1801171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1802581-1802687:1:exon

position:1802581:1
position: 1802581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1802687:1
position: 1802687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1803175-1803457:1:exon

position:1803175:1
position: 1803175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1803457:1
position: 1803457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1805397-1805648:1:exon

position:1805397:1
position: 1805397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1805648:1
position: 1805648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1806339-1806491:1:exon

position:1806339:1
position: 1806339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1806491:1
position: 1806491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1807318-1807476:1:exon

position:1807318:1
position: 1807318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1807476:1
position: 1807476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1808706-1808795:1:exon

position:1808706:1
position: 1808706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1808795:1
position: 1808795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1810159-1810277:1:exon

position:1810159:1
position: 1810159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1810277:1
position: 1810277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1811744-1811954:1:exon

position:1811744:1
position: 1811744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1811954:1
position: 1811954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1813443-1813559:1:exon

position:1813443:1
position: 1813443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1813559:1
position: 1813559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1814258-1814496:1:exon

position:1814258:1
position: 1814258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1814496:1
position: 1814496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1815665-1815848:1:exon

position:1815665:1
position: 1815665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1815848:1
position: 1815848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1816033-1816606:1:exon

position:1816033:1
position: 1816033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1816606:1
position: 1816606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1817046-1817215:1:exon

position:1817046:1
position: 1817046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1817215:1
position: 1817215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1818253-1818426:1:exon

position:1818253:1
position: 1818253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1818426:1
position: 1818426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1819108-1819200:1:exon

position:1819108:1
position: 1819108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1819200:1
position: 1819200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1819547-1819641:1:exon

position:1819547:1
position: 1819547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1819641:1
position: 1819641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1819847-1820054:1:exon

position:1819847:1
position: 1819847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1820054:1
position: 1820054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1821421-1822887:1:exon

position:1821421:1
position: 1821421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110479819
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110479819
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1790818..1791735)
location: region:1790818-1791735:-1
so has part: feature:1790818-1791735:-1:exon
subclass of: SO_0000010

110479819
type: Gene
SIO_000068: ncbigene

position:1790818:-1
position: 1790818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1791735:-1
position: 1791735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1790818-1791735:-1:exon

LOC110479819
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110479819
product: basic salivary proline-rich protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_021547340.1
SIO_010081: LOC110479819
subclass of: SO_0000673
so part of: LOC110479819
location: complement(1790818..1791735)
location: region:1790818-1791735:-1
so has part: feature:1790818-1791735:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1790818-1791735:-1:exon

LOC110479819
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110479819
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic salivary proline-rich protein 1-like
translation: MGALAPPTRPSPIGRGPQEGDVERKGGRRGGGGATAEEKCPYKQRAPPPSRLPRRPIGCDTGAPANWRAGPRRRHDEKPTHAANWPCPPPARPRPPLWGALLWNVYIAAAARASGCPRQPPHRPRAPPPTASAAGVAGGTWRRGSVPGAARRCLLSPTPSLPGWRRPTWGGSVTRAGGEHTAHAHTGSRTRPAHSHTLTLTHARTEEEEGGDRGRCAPRGAAPSAAAANGVPGRGRGHRGNGPRPPPAHTHSVTRLPPRPLPPPSRASRRRDPQRARASLPSTPPAAFPSGSRPAAGPALGKRSP
SIO_010081: LOC110479819
subclass of: SO_0000673
so part of: LOC110479819
location: complement(1790818..1791735)
location: region:1790818-1791735:-1
so has part: feature:1790818-1791735:-1:exon

XP_021403015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1790818-1791735:-1:exon

SIN3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SIN3A
product: SIN3 transcription regulator family member A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 10 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021547333.2
SIO_010081: SIN3A
subclass of: SO_0000673
so part of: SIN3A
location: join(1791998..1792074,1799353..1799573,1800995..1801171,1802581..1802687,1803175..1803457,1805397..1805648,1806339..1806491,1807318..1807476,1808706..1808795,1810159..1810277,1811744..1811954,1813443..1813559,1814258..1814496,1815665..1815848,1816033..1816606,1817046..1817215,1818253..1818426,1819108..1819200,1819547..1819641,1819847..1820054,1821421..1822887)
location: region:1791998-1822887:1
so has part: feature:1791998-1792074:1:exon
so has part: feature:1799353-1799573:1:exon
so has part: feature:1800995-1801171:1:exon
so has part: feature:1802581-1802687:1:exon
so has part: feature:1803175-1803457:1:exon
so has part: feature:1805397-1805648:1:exon
so has part: feature:1806339-1806491:1:exon
so has part: feature:1807318-1807476:1:exon
so has part: feature:1808706-1808795:1:exon
so has part: feature:1810159-1810277:1:exon
so has part: feature:1811744-1811954:1:exon
so has part: feature:1813443-1813559:1:exon
so has part: feature:1814258-1814496:1:exon
so has part: feature:1815665-1815848:1:exon
so has part: feature:1816033-1816606:1:exon
so has part: feature:1817046-1817215:1:exon
so has part: feature:1818253-1818426:1:exon
so has part: feature:1819108-1819200:1:exon
so has part: feature:1819547-1819641:1:exon
so has part: feature:1819847-1820054:1:exon
so has part: feature:1821421-1822887:1:exon

position:1791998:1
position: 1791998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1791998-1792074:1:exon

position:1792074:1
position: 1792074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1799353-1799573:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1800995-1801171:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1802581-1802687:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1803175-1803457:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1805397-1805648:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1806339-1806491:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1807318-1807476:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1808706-1808795:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1810159-1810277:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1811744-1811954:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1813443-1813559:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1814258-1814496:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1815665-1815848:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1816033-1816606:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1817046-1817215:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1818253-1818426:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1819108-1819200:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1819547-1819641:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1819847-1820054:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1821421-1822887:1:exon

SIN3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SIN3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paired amphipathic helix protein Sin3a
translation: MKRRLDEQESPVYASQQRRITSSTEAFPHQHRVLAPAPPVYEAVSETMQSATGIQYSVTPSYQVSAVPQSSGSHGPAIAAVHGGHHHPAPVQPHGSQVVQSHTHPTPPAVPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGLQPQPQPQPPHPSQPSAQSTPTPAQPAPQPTPAKISKPSQLQAHTPASQQTPPIPPYASPRSPPVQPHTPVTISLGTTPSLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVESVRNDHGGTVKKPQLNNKQQRPNQNGCQIRRHSGTGATPPVKKKPKLLGLKDQSLAEASKHGVGTESLFFEKVRKALRSTEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFTWFKNFLGYKESVHMETYPKERATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVIHRKALQRIYADKAADIIDGLRKNPSVAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQASEDNAGVPTGPHLSLAYEDKQILEDAASLIIHHVKRQTGIQKEDKYKIKQIMYHFIPDLLFAQRGELSDVEEEEEEEMDVDEATGAAKKHNGVGGSPPKTKLMFNNTTAQKLRGMDEVYNLFYVNSNWYIFMRLHQILCLRLLRICTQAERQIEEETREREWEREVLGIKRDKSDSPAIQLRLKEPMDIDVEDYYPAFLDMVRNLLDGNMDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQVTDLYLSENSNGATGGLLASQSSRTLLEAAYQRKAEQLMSEENCFKLMFIQSRGQVQLTIELLDTEEENSDDPVEAERWSDYVERYVNSDSTSPELREHLAQKPVFLPRNLRRIRKCQRGREQQEKEGKEGNSKKSMENLESLDKMECKFKLNSYKMVYVIKSEDYMYRRTALLRAQQSHERVSKRLHQRFQAWVDKWTKEHVPREMAAETNKWLMGEGLEGLVPCTTTCDTETLHFVSINKYRVKYGTIFKTP
SIO_010081: SIN3A
subclass of: SO_0000673
so part of: SIN3A
location: join(1799385..1799573,1800995..1801171,1802581..1802687,1803175..1803457,1805397..1805648,1806339..1806491,1807318..1807476,1808706..1808795,1810159..1810277,1811744..1811954,1813443..1813559,1814258..1814496,1815665..1815848,1816033..1816606,1817046..1817215,1818253..1818426,1819108..1819200,1819547..1819641,1819847..1820054,1821421..1821651)
location: region:1799385-1821651:1
so has part: feature:1799385-1799573:1:exon
so has part: feature:1800995-1801171:1:exon
so has part: feature:1802581-1802687:1:exon
so has part: feature:1803175-1803457:1:exon
so has part: feature:1805397-1805648:1:exon
so has part: feature:1806339-1806491:1:exon
so has part: feature:1807318-1807476:1:exon
so has part: feature:1808706-1808795:1:exon
so has part: feature:1810159-1810277:1:exon
so has part: feature:1811744-1811954:1:exon
so has part: feature:1813443-1813559:1:exon
so has part: feature:1814258-1814496:1:exon
so has part: feature:1815665-1815848:1:exon
so has part: feature:1816033-1816606:1:exon
so has part: feature:1817046-1817215:1:exon
so has part: feature:1818253-1818426:1:exon
so has part: feature:1819108-1819200:1:exon
so has part: feature:1819547-1819641:1:exon
so has part: feature:1819847-1820054:1:exon
so has part: feature:1821421-1821651:1:exon

XP_021403008.1
type: Protein
SIO_000068: ncbiprotein

position:1799385:1
position: 1799385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1821651:1
position: 1821651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1799385-1799573:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1800995-1801171:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1802581-1802687:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1803175-1803457:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1805397-1805648:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1806339-1806491:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1807318-1807476:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1808706-1808795:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1810159-1810277:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1811744-1811954:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1813443-1813559:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1814258-1814496:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1815665-1815848:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1816033-1816606:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1817046-1817215:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1818253-1818426:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1819108-1819200:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1819547-1819641:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1819847-1820054:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1821421-1821651:1:exon

SIN3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SIN3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paired amphipathic helix protein Sin3a
translation: MKRRLDEQESPVYASQQRRITSSTEAFPHQHRVLAPAPPVYEAVSETMQSATGIQYSVTPSYQVSAVPQSSGSHGPAIAAVHGGHHHPAPVQPHGSQVVQSHTHPTPPAVPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGLQPQPQPQPPHPSQPSAQSTPTPAQPAPQPTPAKISKPSQLQAHTPASQQTPPIPPYASPRSPPVQPHTPVTISLGTTPSLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVESVRNDHGGTVKKPQLNNKQQRPNQNGCQIRRHSGTGATPPVKKKPKLLGLKDQSLAEASKHGVGTESLFFEKVRKALRSTEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFTWFKNFLGYKESVHMETYPKERATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVIHRKALQRIYADKAADIIDGLRKNPSVAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQASEDNAGVPTGPHLSLAYEDKQILEDAASLIIHHVKRQTGIQKEDKYKIKQIMYHFIPDLLFAQRGELSDVEEEEEEEMDVDEATGAAKKHNGVGGSPPKTKLMFNNTTAQKLRGMDEVYNLFYVNSNWYIFMRLHQILCLRLLRICTQAERQIEEETREREWEREVLGIKRDKSDSPAIQLRLKEPMDIDVEDYYPAFLDMVRNLLDGNMDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQVTDLYLSENSNGATGGLLASQSSRTLLEAAYQRKAEQLMSEENCFKLMFIQSRGQVQLTIELLDTEEENSDDPVEAERWSDYVERYVNSDSTSPELREHLAQKPVFLPRNLRRIRKCQRGREQQEKEGKEGNSKKSMENLESLDKMECKFKLNSYKMVYVIKSEDYMYRRTALLRAQQSHERVSKRLHQRFQAWVDKWTKEHVPREMAAETNKWLMGEGLEGLVPCTTTCDTETLHFVSINKYRVKYGTIFKTP
SIO_010081: SIN3A
subclass of: SO_0000673
so part of: SIN3A
location: join(1799385..1799573,1800995..1801171,1802581..1802687,1803175..1803457,1805397..1805648,1806339..1806491,1807318..1807476,1808706..1808795,1810159..1810277,1811744..1811954,1813443..1813559,1814258..1814496,1815665..1815848,1816033..1816606,1817046..1817215,1818253..1818426,1819108..1819200,1819547..1819641,1819847..1820054,1821421..1821651)
location: region:1799385-1821651:1
so has part: feature:1799385-1799573:1:exon
so has part: feature:1800995-1801171:1:exon
so has part: feature:1802581-1802687:1:exon
so has part: feature:1803175-1803457:1:exon
so has part: feature:1805397-1805648:1:exon
so has part: feature:1806339-1806491:1:exon
so has part: feature:1807318-1807476:1:exon
so has part: feature:1808706-1808795:1:exon
so has part: feature:1810159-1810277:1:exon
so has part: feature:1811744-1811954:1:exon
so has part: feature:1813443-1813559:1:exon
so has part: feature:1814258-1814496:1:exon
so has part: feature:1815665-1815848:1:exon
so has part: feature:1816033-1816606:1:exon
so has part: feature:1817046-1817215:1:exon
so has part: feature:1818253-1818426:1:exon
so has part: feature:1819108-1819200:1:exon
so has part: feature:1819547-1819641:1:exon
so has part: feature:1819847-1820054:1:exon
so has part: feature:1821421-1821651:1:exon

XP_021403009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1799385-1799573:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1800995-1801171:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1802581-1802687:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1803175-1803457:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1805397-1805648:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1806339-1806491:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1807318-1807476:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1808706-1808795:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1810159-1810277:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1811744-1811954:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1813443-1813559:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1814258-1814496:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1815665-1815848:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1816033-1816606:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1817046-1817215:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1818253-1818426:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1819108-1819200:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1819547-1819641:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1819847-1820054:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1821421-1821651:1:exon

MAN2C1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: MAN2C1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1825312..1836286
location: region:1825312-1836286:1
so has part: feature:1825312-1836286:1:exon
subclass of: SO_0000010

110479818
type: Gene
SIO_000068: ncbigene

position:1825312:1
position: 1825312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1836286:1
position: 1836286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1825312-1836286:1:exon

MAN2C1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: MAN2C1
product: mannosidase alpha class 2C member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031505770.1
SIO_010081: MAN2C1
subclass of: SO_0000673
so part of: MAN2C1
location: join(1825312..1825420,1826409..1826534,1827021..1827144,1827395..1827465,1827608..1827785,1828242..1828431,1828801..1828907,1829059..1829169,1829528..1829620,1829735..1829851,1830283..1830378,1830681..1830826,1831267..1831390,1831552..1831673,1832189..1832274,1832739..1832909,1833191..1833273,1833454..1833548,1833671..1833775,1833956..1834112,1834413..1834556,1834636..1834745,1835308..1835387,1835514..1835659,1835821..1835924,1835999..1836286)
location: region:1825312-1836286:1
so has part: feature:1825312-1825420:1:exon
so has part: feature:1826409-1826534:1:exon
so has part: feature:1827021-1827144:1:exon
so has part: feature:1827395-1827465:1:exon
so has part: feature:1827608-1827785:1:exon
so has part: feature:1828242-1828431:1:exon
so has part: feature:1828801-1828907:1:exon
so has part: feature:1829059-1829169:1:exon
so has part: feature:1829528-1829620:1:exon
so has part: feature:1829735-1829851:1:exon
so has part: feature:1830283-1830378:1:exon
so has part: feature:1830681-1830826:1:exon
so has part: feature:1831267-1831390:1:exon
so has part: feature:1831552-1831673:1:exon
so has part: feature:1832189-1832274:1:exon
so has part: feature:1832739-1832909:1:exon
so has part: feature:1833191-1833273:1:exon
so has part: feature:1833454-1833548:1:exon
so has part: feature:1833671-1833775:1:exon
so has part: feature:1833956-1834112:1:exon
so has part: feature:1834413-1834556:1:exon
so has part: feature:1834636-1834745:1:exon
so has part: feature:1835308-1835387:1:exon
so has part: feature:1835514-1835659:1:exon
so has part: feature:1835821-1835924:1:exon
so has part: feature:1835999-1836286:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1825312-1825420:1:exon

position:1825420:1
position: 1825420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1826409-1826534:1:exon

position:1826409:1
position: 1826409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1826534:1
position: 1826534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1827021-1827144:1:exon

position:1827021:1
position: 1827021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1827144:1
position: 1827144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1827395-1827465:1:exon

position:1827395:1
position: 1827395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1827465:1
position: 1827465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1827608-1827785:1:exon

position:1827608:1
position: 1827608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1827785:1
position: 1827785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1828242-1828431:1:exon

position:1828242:1
position: 1828242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1828431:1
position: 1828431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1828801-1828907:1:exon

position:1828801:1
position: 1828801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1828907:1
position: 1828907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1829059-1829169:1:exon

position:1829059:1
position: 1829059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1829169:1
position: 1829169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1829528-1829620:1:exon

position:1829528:1
position: 1829528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1829620:1
position: 1829620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1829735-1829851:1:exon

position:1829735:1
position: 1829735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1829851:1
position: 1829851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1830283-1830378:1:exon

position:1830283:1
position: 1830283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1830378:1
position: 1830378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1830681-1830826:1:exon

position:1830681:1
position: 1830681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1830826:1
position: 1830826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1831267-1831390:1:exon

position:1831267:1
position: 1831267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1831390:1
position: 1831390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1831552-1831673:1:exon

position:1831552:1
position: 1831552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1831673:1
position: 1831673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1832189-1832274:1:exon

position:1832189:1
position: 1832189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1832274:1
position: 1832274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1832739-1832909:1:exon

position:1832739:1
position: 1832739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1832909:1
position: 1832909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1833191-1833273:1:exon

position:1833191:1
position: 1833191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1833273:1
position: 1833273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1833454-1833548:1:exon