Lonchura striata domestica isolate Mets1 chromosome 9, lonStrDom2, whole genome shotgun sequence.
type: Entry
definition: Lonchura striata domestica isolate Mets1 chromosome 9, lonStrDom2, whole genome shotgun sequence.
sequence version: NC_042575.1
sequence date: 2019-11-05
sequence: sequence
division: CON
label: NC_042575.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA391487
dblink: SAMN11521339
keyword: WGS
keyword: RefSeq
source: Lonchura striata domestica (Bengalese finch)
organism: Lonchura striata domestica
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM016771.1.\nAssembly name: lonStrDom2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the HHMI/UCSF on 2019/06/05. The\noriginal whole-genome shotgun project has the accession\nSWKX00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: HHMI/UCSF\nAssembly Date :: 30-NOV-2018\nAssembly Method :: AllPaths v. JAN-2015; HiRise v.\n NOV-2018\nAssembly Name :: lonStrDom2\nGenome Representation :: Full\nExpected Final Version :: Yes\nReference-guided Assembly :: GCA_002197715.1\nGenome Coverage :: 151.0x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Lonchura striata domestica\n Annotation Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 25959029
topology: linear
so has quality: SO_0000987
location: 1..25959029
location: region:1-25959029:1
RO_0002162: 299123

NC_042575
type: RefSeq
SIO_000068: refseq

PRJNA391487
type: BioProject
SIO_000068: bioproject

SAMN11521339
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25959029:1
position: 25959029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-25959029:1:source
so part of: sequence
organism: Lonchura striata domestica
mol type: genomic DNA
isolate: Mets1
sub species: domestica
chromosome: 9
sex: male
tissue type: blood
dev stage: adult

299123
type: Taxonomy
SIO_000068: taxonomy

GYG1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: GYG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 18872..34009
location: region:18872-34009:1
so has part: feature:18872-34009:1:exon
subclass of: SO_0000010

110478357
type: Gene
SIO_000068: ncbigene

position:18872:1
position: 18872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34009:1
position: 34009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18872-34009:1:exon

GYG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: GYG1
product: glycogenin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021544918.2
SIO_010081: GYG1
subclass of: SO_0000673
so part of: GYG1
location: join(18872..19004,22281..22416,24258..24432,24764..24926,28367..28493,31575..31794,32401..32451,32671..34009)
location: region:18872-34009:1
so has part: feature:18872-19004:1:exon
so has part: feature:22281-22416:1:exon
so has part: feature:24258-24432:1:exon
so has part: feature:24764-24926:1:exon
so has part: feature:28367-28493:1:exon
so has part: feature:31575-31794:1:exon
so has part: feature:32401-32451:1:exon
so has part: feature:32671-34009:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18872-19004:1:exon

position:19004:1
position: 19004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:22281-22416:1:exon

position:22281:1
position: 22281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22416:1
position: 22416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:24258-24432:1:exon

position:24258:1
position: 24258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24432:1
position: 24432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:24764-24926:1:exon

position:24764:1
position: 24764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24926:1
position: 24926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:28367-28493:1:exon

position:28367:1
position: 28367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28493:1
position: 28493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:31575-31794:1:exon

position:31575:1
position: 31575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31794:1
position: 31794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:32401-32451:1:exon

position:32401:1
position: 32401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32451:1
position: 32451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:32671-34009:1:exon

position:32671:1
position: 32671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GYG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: GYG1
product: glycogenin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_021544919.2
SIO_010081: GYG1
subclass of: SO_0000673
so part of: GYG1
location: join(18872..19004,22281..22416,24258..24432,24764..24926,28367..28493,31575..31794,32671..34009)
location: region:18872-34009:1
so has part: feature:18872-19004:1:exon
so has part: feature:22281-22416:1:exon
so has part: feature:24258-24432:1:exon
so has part: feature:24764-24926:1:exon
so has part: feature:28367-28493:1:exon
so has part: feature:31575-31794:1:exon
so has part: feature:32671-34009:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18872-19004:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22281-22416:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:24258-24432:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24764-24926:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28367-28493:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:31575-31794:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:32671-34009:1:exon

GYG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: GYG1
product: glycogenin 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021544921.2
SIO_010081: GYG1
subclass of: SO_0000673
so part of: GYG1
location: join(18880..19004,20069..20154,22281..22416,24258..24432,24764..24926,28367..28493,31575..31794,32401..32451,32671..34009)
location: region:18880-34009:1
so has part: feature:18880-19004:1:exon
so has part: feature:20069-20154:1:exon
so has part: feature:22281-22416:1:exon
so has part: feature:24258-24432:1:exon
so has part: feature:24764-24926:1:exon
so has part: feature:28367-28493:1:exon
so has part: feature:31575-31794:1:exon
so has part: feature:32401-32451:1:exon
so has part: feature:32671-34009:1:exon

position:18880:1
position: 18880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18880-19004:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:20069-20154:1:exon

position:20069:1
position: 20069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20154:1
position: 20154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:22281-22416:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24258-24432:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:24764-24926:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:28367-28493:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:31575-31794:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:32401-32451:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:32671-34009:1:exon

GYG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: GYG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycogenin-1 isoform X1
translation: MADQSFVTLATNDSYVKGALVLGSSLQQYRTTRKLTALITPQVSDLMRKVLERVFDEVILVNVLDSGDSAHLALMKRPELGVTLTKLHCWELTQFSKCVFMDADTMVLSNIDELFEREELSAAPDPGWPDCFNSGVFVYRPSIETYSQLLQFATEKGSFDGADQGLLNTFFSSWATTDMSKHLPFIYNLSSTSVYSYLPAFKAFGANTKVVHFLGSTKPWNYTYDSRTKSIKGNMDDPKIVHPEFLNMWWDTYISDILPLLEQHGIVKEITTGVNMLSGLVNTLAFSCGFCREAEVTEAVSHVSVSPLLPTESSEERKERWEQGQADYMGVDSFDNIKKKLDTYLQ
SIO_010081: GYG1
subclass of: SO_0000673
so part of: GYG1
location: join(18998..19004,22281..22416,24258..24432,24764..24926,28367..28493,31575..31794,32401..32451,32671..32832)
location: region:18998-32832:1
so has part: feature:18998-19004:1:exon
so has part: feature:22281-22416:1:exon
so has part: feature:24258-24432:1:exon
so has part: feature:24764-24926:1:exon
so has part: feature:28367-28493:1:exon
so has part: feature:31575-31794:1:exon
so has part: feature:32401-32451:1:exon
so has part: feature:32671-32832:1:exon

XP_021400593.1
type: Protein
SIO_000068: ncbiprotein

position:18998:1
position: 18998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32832:1
position: 32832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18998-19004:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22281-22416:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:24258-24432:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24764-24926:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28367-28493:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:31575-31794:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:32401-32451:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:32671-32832:1:exon

GYG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: GYG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycogenin-1 isoform X2
translation: MADQSFVTLATNDSYVKGALVLGSSLQQYRTTRKLTALITPQVSDLMRKVLERVFDEVILVNVLDSGDSAHLALMKRPELGVTLTKLHCWELTQFSKCVFMDADTMVLSNIDELFEREELSAAPDPGWPDCFNSGVFVYRPSIETYSQLLQFATEKGSFDGADQGLLNTFFSSWATTDMSKHLPFIYNLSSTSVYSYLPAFKAFGANTKVVHFLGSTKPWNYTYDSRTKSIKGNMDDPKIVHPEFLNMWWDTYISDILPLLEQHGIVKEITTGVNMAEVTEAVSHVSVSPLLPTESSEERKERWEQGQADYMGVDSFDNIKKKLDTYLQ
SIO_010081: GYG1
subclass of: SO_0000673
so part of: GYG1
location: join(18998..19004,22281..22416,24258..24432,24764..24926,28367..28493,31575..31794,32671..32832)
location: region:18998-32832:1
so has part: feature:18998-19004:1:exon
so has part: feature:22281-22416:1:exon
so has part: feature:24258-24432:1:exon
so has part: feature:24764-24926:1:exon
so has part: feature:28367-28493:1:exon
so has part: feature:31575-31794:1:exon
so has part: feature:32671-32832:1:exon

XP_021400594.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18998-19004:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22281-22416:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:24258-24432:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24764-24926:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28367-28493:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:31575-31794:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:32671-32832:1:exon

GYG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: GYG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycogenin-1 isoform X3
translation: MRKVLERVFDEVILVNVLDSGDSAHLALMKRPELGVTLTKLHCWELTQFSKCVFMDADTMVLSNIDELFEREELSAAPDPGWPDCFNSGVFVYRPSIETYSQLLQFATEKGSFDGADQGLLNTFFSSWATTDMSKHLPFIYNLSSTSVYSYLPAFKAFGANTKVVHFLGSTKPWNYTYDSRTKSIKGNMDDPKIVHPEFLNMWWDTYISDILPLLEQHGIVKEITTGVNMLSGLVNTLAFSCGFCREAEVTEAVSHVSVSPLLPTESSEERKERWEQGQADYMGVDSFDNIKKKLDTYLQ
SIO_010081: GYG1
subclass of: SO_0000673
so part of: GYG1
location: join(22412..22416,24258..24432,24764..24926,28367..28493,31575..31794,32401..32451,32671..32832)
location: region:22412-32832:1
so has part: feature:22412-22416:1:exon
so has part: feature:24258-24432:1:exon
so has part: feature:24764-24926:1:exon
so has part: feature:28367-28493:1:exon
so has part: feature:31575-31794:1:exon
so has part: feature:32401-32451:1:exon
so has part: feature:32671-32832:1:exon

XP_021400596.1
type: Protein
SIO_000068: ncbiprotein

position:22412:1
position: 22412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22412-22416:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:24258-24432:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:24764-24926:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:28367-28493:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:31575-31794:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:32401-32451:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:32671-32832:1:exon

LOC116183940
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116183940
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(37860..41939)
location: region:37860-41939:-1
so has part: feature:37860-41939:-1:exon
subclass of: SO_0000011

116183940
type: Gene
SIO_000068: ncbigene

position:37860:-1
position: 37860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41939:-1
position: 41939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37860-41939:-1:exon

LOC116183940
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC116183940
product: uncharacterized LOC116183940
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004148651.1
SIO_010081: LOC116183940
subclass of: SO_0000673
so part of: LOC116183940
location: complement(join(37860..38115,41700..41939))
location: region:37860-41939:-1
so has part: feature:41700-41939:-1:exon
so has part: feature:37860-38115:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41700-41939:-1:exon

position:41700:-1
position: 41700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:37860-38115:-1:exon

position:38115:-1
position: 38115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110478356
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110478356
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 48894..53123
location: region:48894-53123:1
so has part: feature:48894-53123:1:exon
subclass of: SO_0000010

110478356
type: Gene
SIO_000068: ncbigene

position:48894:1
position: 48894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53123:1
position: 53123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48894-53123:1:exon

LOC110478356
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110478356
product: tubulin alpha-3 chain, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 ESTs, 53 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021544917.1
SIO_010081: LOC110478356
subclass of: SO_0000673
so part of: LOC110478356
location: join(48894..49145,50585..50807,51339..51487,51823..52503,52729..53123)
location: region:48894-53123:1
so has part: feature:48894-49145:1:exon
so has part: feature:50585-50807:1:exon
so has part: feature:51339-51487:1:exon
so has part: feature:51823-52503:1:exon
so has part: feature:52729-53123:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:48894-49145:1:exon

position:49145:1
position: 49145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:50585-50807:1:exon

position:50585:1
position: 50585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50807:1
position: 50807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:51339-51487:1:exon

position:51339:1
position: 51339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51487:1
position: 51487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:51823-52503:1:exon

position:51823:1
position: 51823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52503:1
position: 52503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:52729-53123:1:exon

position:52729:1
position: 52729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110478356
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110478356
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin alpha-3 chain isoform X2
translation: MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQVPSDNTMGRGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIGRPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITHACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGADLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYTKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGLDSVEAEAEEGDEY
SIO_010081: LOC110478356
subclass of: SO_0000673
so part of: LOC110478356
location: join(49143..49145,50585..50807,51339..51487,51823..52503,52729..53025)
location: region:49143-53025:1
so has part: feature:49143-49145:1:exon
so has part: feature:50585-50807:1:exon
so has part: feature:51339-51487:1:exon
so has part: feature:51823-52503:1:exon
so has part: feature:52729-53025:1:exon

XP_021400592.1
type: Protein
SIO_000068: ncbiprotein

position:49143:1
position: 49143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53025:1
position: 53025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49143-49145:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:50585-50807:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:51339-51487:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:51823-52503:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:52729-53025:1:exon

LOC110478356
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110478356
product: tubulin alpha-3 chain, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 53 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021544916.1
SIO_010081: LOC110478356
subclass of: SO_0000673
so part of: LOC110478356
location: join(50357..50431,50585..50807,51339..51487,51823..52503,52729..53123)
location: region:50357-53123:1
so has part: feature:50357-50431:1:exon
so has part: feature:50585-50807:1:exon
so has part: feature:51339-51487:1:exon
so has part: feature:51823-52503:1:exon
so has part: feature:52729-53123:1:exon

position:50357:1
position: 50357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50357-50431:1:exon

position:50431:1
position: 50431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:50585-50807:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:51339-51487:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:51823-52503:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:52729-53123:1:exon

LOC110478356
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110478356
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin alpha-3 chain isoform X1
translation: MSAKRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQVPSDNTMGRGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIGRPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITHACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGADLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYTKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGLDSVEAEAEEGDEY
SIO_010081: LOC110478356
subclass of: SO_0000673
so part of: LOC110478356
location: join(50420..50431,50585..50807,51339..51487,51823..52503,52729..53025)
location: region:50420-53025:1
so has part: feature:50420-50431:1:exon
so has part: feature:50585-50807:1:exon
so has part: feature:51339-51487:1:exon
so has part: feature:51823-52503:1:exon
so has part: feature:52729-53025:1:exon

XP_021400591.1
type: Protein
SIO_000068: ncbiprotein

position:50420:1
position: 50420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50420-50431:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:50585-50807:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:51339-51487:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:51823-52503:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:52729-53025:1:exon

HPS3
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: HPS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 53952..74046
location: region:53952-74046:1
so has part: feature:53952-74046:1:exon
subclass of: SO_0000010

110478359
type: Gene
SIO_000068: ncbigene

position:53952:1
position: 53952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74046:1
position: 74046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53952-74046:1:exon

HPS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: HPS3
product: HPS3 biogenesis of lysosomal organelles complex 2 subunit 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021544924.2
SIO_010081: HPS3
subclass of: SO_0000673
so part of: HPS3
location: join(53952..54270,55198..55692,56998..57184,58151..58236,59912..60104,60373..60454,62354..62508,64032..64140,64351..64532,64897..65074,65696..65926,67587..67772,68952..69140,69681..69788,70147..70353,71642..71732,72892..74046)
location: region:53952-74046:1
so has part: feature:53952-54270:1:exon
so has part: feature:55198-55692:1:exon
so has part: feature:56998-57184:1:exon
so has part: feature:58151-58236:1:exon
so has part: feature:59912-60104:1:exon
so has part: feature:60373-60454:1:exon
so has part: feature:62354-62508:1:exon
so has part: feature:64032-64140:1:exon
so has part: feature:64351-64532:1:exon
so has part: feature:64897-65074:1:exon
so has part: feature:65696-65926:1:exon
so has part: feature:67587-67772:1:exon
so has part: feature:68952-69140:1:exon
so has part: feature:69681-69788:1:exon
so has part: feature:70147-70353:1:exon
so has part: feature:71642-71732:1:exon
so has part: feature:72892-74046:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:53952-54270:1:exon

position:54270:1
position: 54270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:55198-55692:1:exon

position:55198:1
position: 55198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55692:1
position: 55692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:56998-57184:1:exon

position:56998:1
position: 56998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57184:1
position: 57184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:58151-58236:1:exon

position:58151:1
position: 58151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58236:1
position: 58236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:59912-60104:1:exon

position:59912:1
position: 59912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60104:1
position: 60104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:60373-60454:1:exon

position:60373:1
position: 60373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60454:1
position: 60454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:62354-62508:1:exon

position:62354:1
position: 62354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62508:1
position: 62508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:64032-64140:1:exon

position:64032:1
position: 64032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64140:1
position: 64140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:64351-64532:1:exon

position:64351:1
position: 64351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64532:1
position: 64532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:64897-65074:1:exon

position:64897:1
position: 64897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65074:1
position: 65074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:65696-65926:1:exon

position:65696:1
position: 65696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65926:1
position: 65926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:67587-67772:1:exon

position:67587:1
position: 67587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67772:1
position: 67772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:68952-69140:1:exon

position:68952:1
position: 68952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69140:1
position: 69140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:69681-69788:1:exon

position:69681:1
position: 69681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69788:1
position: 69788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:70147-70353:1:exon

position:70147:1
position: 70147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70353:1
position: 70353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:71642-71732:1:exon

position:71642:1
position: 71642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71732:1
position: 71732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:72892-74046:1:exon

position:72892:1
position: 72892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HPS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: HPS3
product: HPS3 biogenesis of lysosomal organelles complex 2 subunit 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021544925.2
SIO_010081: HPS3
subclass of: SO_0000673
so part of: HPS3
location: join(53953..54270,55198..55692,56998..57184,58151..58236,59912..60104,60373..60454,64351..64532,64897..65074,65696..65926,67587..67772,68952..69140,69681..69788,70147..70353,71642..71732,72892..74046)
location: region:53953-74046:1
so has part: feature:53953-54270:1:exon
so has part: feature:55198-55692:1:exon
so has part: feature:56998-57184:1:exon
so has part: feature:58151-58236:1:exon
so has part: feature:59912-60104:1:exon
so has part: feature:60373-60454:1:exon
so has part: feature:64351-64532:1:exon
so has part: feature:64897-65074:1:exon
so has part: feature:65696-65926:1:exon
so has part: feature:67587-67772:1:exon
so has part: feature:68952-69140:1:exon
so has part: feature:69681-69788:1:exon
so has part: feature:70147-70353:1:exon
so has part: feature:71642-71732:1:exon
so has part: feature:72892-74046:1:exon

position:53953:1
position: 53953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53953-54270:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:55198-55692:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:56998-57184:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58151-58236:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:59912-60104:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:60373-60454:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:64351-64532:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:64897-65074:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:65696-65926:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:67587-67772:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:68952-69140:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:69681-69788:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:70147-70353:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:71642-71732:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:72892-74046:1:exon

HPS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: HPS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Hermansky-Pudlak syndrome 3 protein isoform X1
translation: MVQLYNLHPFGSQRVVPCKQEPAHFCCGQDVLFVASAAASCRVEVFAVREQGRCEALGSFATLGPVLRMAHSSAGDYLVTIEEKSKATFLRAYTNWRCMSAGSSRVCVRMVGHKMEESYSETLKEQMSVVEMPLSDPPLCISCCPVNGDLLVGCKNKLVMFCLKYRVINQNLTLLDFERSLILHIDNLIPAEVAFCARHIAIATELDVLILKLELVQRSADRTDRCAQGVSAPEKVVDGGVKDENPSTHPLQLELDEFIICQKPVELLGEESKLCEIPVTLESTELPTEDTKHFQVQYLLFRRFAPDQSPFGFCEETKLHSVQLLPVYQTGISATAYEETENKRKLLSLFCFFSLPHVGYLYSLGKLVELISTYQYSEKSEQAVLTPQFLHVITSQNLQCFTVRCSAAAARGEDPYIDTTMKACPSVTLDVCTLRMQLFIGPRAICHFKNHIILLTKADTEDITERRKPTRRMLSRKADSIKSRTNSESEPGWNLYIINTVSTIQLYREMVEYSRTYENVKTESCIHLLSEAHLLVRAAIMDPHFLKSDEKEDLVRAFRESCAFLGDCYSRFDTKDYHLALPYYRMSGLSMTEVLKRIVSEGDEIQTYERGFIFYLTHSLNEDSNEELSKESGNKVLQIFYLADPVQLPDILCSPSMRNICPLTAVKYLQEVEKMMPSVVLTLTKAFLALKMGNLTMYEHEMQSYKETTLACGFIGQPRLLQQRKEGIAMPTEFAVHLKEMQPGLLVAATVALHENSKIELEEADTFFKMLYNSSENTIPQLLVDFWEALLVVSSQEKVLQELLLRVASQYVWRISKKQLPETKPLKTTEDLINSCSHFGLIVPWVTSVMSVGCLYDKDYHEDISRLQSLLCSQSINIASVLPVLEPLTEADSVGLTVRVLCNTRLGKYEEAIDQLLSRCPDAAVFYAQHELKGDSQALWWNKLLPELCKRTRRTGNDCPVLISSLKETLSIVAMELELRDFLSLLPEDGTAAFFIPHLLHCSQRKLVT
SIO_010081: HPS3
subclass of: SO_0000673
so part of: HPS3
location: join(54048..54270,55198..55692,56998..57184,58151..58236,59912..60104,60373..60454,62354..62508,64032..64140,64351..64532,64897..65074,65696..65926,67587..67772,68952..69140,69681..69788,70147..70353,71642..71732,72892..73019)
location: region:54048-73019:1
so has part: feature:54048-54270:1:exon
so has part: feature:55198-55692:1:exon
so has part: feature:56998-57184:1:exon
so has part: feature:58151-58236:1:exon
so has part: feature:59912-60104:1:exon
so has part: feature:60373-60454:1:exon
so has part: feature:62354-62508:1:exon
so has part: feature:64032-64140:1:exon
so has part: feature:64351-64532:1:exon
so has part: feature:64897-65074:1:exon
so has part: feature:65696-65926:1:exon
so has part: feature:67587-67772:1:exon
so has part: feature:68952-69140:1:exon
so has part: feature:69681-69788:1:exon
so has part: feature:70147-70353:1:exon
so has part: feature:71642-71732:1:exon
so has part: feature:72892-73019:1:exon

XP_021400599.1
type: Protein
SIO_000068: ncbiprotein

position:54048:1
position: 54048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73019:1
position: 73019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54048-54270:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:55198-55692:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:56998-57184:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58151-58236:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:59912-60104:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:60373-60454:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:62354-62508:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:64032-64140:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:64351-64532:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:64897-65074:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:65696-65926:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:67587-67772:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:68952-69140:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:69681-69788:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:70147-70353:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:71642-71732:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:72892-73019:1:exon

HPS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: HPS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Hermansky-Pudlak syndrome 3 protein isoform X2
translation: MVQLYNLHPFGSQRVVPCKQEPAHFCCGQDVLFVASAAASCRVEVFAVREQGRCEALGSFATLGPVLRMAHSSAGDYLVTIEEKSKATFLRAYTNWRCMSAGSSRVCVRMVGHKMEESYSETLKEQMSVVEMPLSDPPLCISCCPVNGDLLVGCKNKLVMFCLKYRVINQNLTLLDFERSLILHIDNLIPAEVAFCARHIAIATELDVLILKLELVQRSADRTDRCAQGVSAPEKVVDGGVKDENPSTHPLQLELDEFIICQKPVELLGEESKLCEIPVTLESTELPTEDTKHFQVQYLLFRRFAPDQSPFGFCEETKLHSVQLLPVYQTGISATAYEETENKRKLLSLFCFFSLPHVGYLYSLGKLVELISTYQYSEKSEQAVLTPQFLHVITSQNLQCFTVRCSAAAARGEDPYIDTTMKVEYSRTYENVKTESCIHLLSEAHLLVRAAIMDPHFLKSDEKEDLVRAFRESCAFLGDCYSRFDTKDYHLALPYYRMSGLSMTEVLKRIVSEGDEIQTYERGFIFYLTHSLNEDSNEELSKESGNKVLQIFYLADPVQLPDILCSPSMRNICPLTAVKYLQEVEKMMPSVVLTLTKAFLALKMGNLTMYEHEMQSYKETTLACGFIGQPRLLQQRKEGIAMPTEFAVHLKEMQPGLLVAATVALHENSKIELEEADTFFKMLYNSSENTIPQLLVDFWEALLVVSSQEKVLQELLLRVASQYVWRISKKQLPETKPLKTTEDLINSCSHFGLIVPWVTSVMSVGCLYDKDYHEDISRLQSLLCSQSINIASVLPVLEPLTEADSVGLTVRVLCNTRLGKYEEAIDQLLSRCPDAAVFYAQHELKGDSQALWWNKLLPELCKRTRRTGNDCPVLISSLKETLSIVAMELELRDFLSLLPEDGTAAFFIPHLLHCSQRKLVT
SIO_010081: HPS3
subclass of: SO_0000673
so part of: HPS3
location: join(54048..54270,55198..55692,56998..57184,58151..58236,59912..60104,60373..60454,64351..64532,64897..65074,65696..65926,67587..67772,68952..69140,69681..69788,70147..70353,71642..71732,72892..73019)
location: region:54048-73019:1
so has part: feature:54048-54270:1:exon
so has part: feature:55198-55692:1:exon
so has part: feature:56998-57184:1:exon
so has part: feature:58151-58236:1:exon
so has part: feature:59912-60104:1:exon
so has part: feature:60373-60454:1:exon
so has part: feature:64351-64532:1:exon
so has part: feature:64897-65074:1:exon
so has part: feature:65696-65926:1:exon
so has part: feature:67587-67772:1:exon
so has part: feature:68952-69140:1:exon
so has part: feature:69681-69788:1:exon
so has part: feature:70147-70353:1:exon
so has part: feature:71642-71732:1:exon
so has part: feature:72892-73019:1:exon

XP_021400600.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54048-54270:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:55198-55692:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:56998-57184:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58151-58236:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:59912-60104:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:60373-60454:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:64351-64532:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:64897-65074:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:65696-65926:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:67587-67772:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:68952-69140:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:69681-69788:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:70147-70353:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:71642-71732:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:72892-73019:1:exon

CP
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: CP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(66161..92146)
location: region:66161-92146:-1
so has part: feature:66161-92146:-1:exon
subclass of: SO_0000010

110478358
type: Gene
SIO_000068: ncbigene

position:66161:-1
position: 66161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92146:-1
position: 92146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66161-92146:-1:exon

CP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: CP
product: ceruloplasmin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021544922.2
SIO_010081: CP
subclass of: SO_0000673
so part of: CP
location: complement(join(66161..66282,76184..76346,76768..76907,77516..77732,78438..78544,79114..79242,79710..79849,81044..81251,81553..81765,83346..83496,83996..84207,84327..84467,85031..85170,86130..86295,87502..87756,88325..88498,89002..89214,90146..90390,91860..92146))
location: region:66161-92146:-1
so has part: feature:91860-92146:-1:exon
so has part: feature:90146-90390:-1:exon
so has part: feature:89002-89214:-1:exon
so has part: feature:88325-88498:-1:exon
so has part: feature:87502-87756:-1:exon
so has part: feature:86130-86295:-1:exon
so has part: feature:85031-85170:-1:exon
so has part: feature:84327-84467:-1:exon
so has part: feature:83996-84207:-1:exon
so has part: feature:83346-83496:-1:exon
so has part: feature:81553-81765:-1:exon
so has part: feature:81044-81251:-1:exon
so has part: feature:79710-79849:-1:exon
so has part: feature:79114-79242:-1:exon
so has part: feature:78438-78544:-1:exon
so has part: feature:77516-77732:-1:exon
so has part: feature:76768-76907:-1:exon
so has part: feature:76184-76346:-1:exon
so has part: feature:66161-66282:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:91860-92146:-1:exon

position:91860:-1
position: 91860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:90146-90390:-1:exon

position:90146:-1
position: 90146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90390:-1
position: 90390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:89002-89214:-1:exon

position:89002:-1
position: 89002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89214:-1
position: 89214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:88325-88498:-1:exon

position:88325:-1
position: 88325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88498:-1
position: 88498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:87502-87756:-1:exon

position:87502:-1
position: 87502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87756:-1
position: 87756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:86130-86295:-1:exon

position:86130:-1
position: 86130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86295:-1
position: 86295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:85031-85170:-1:exon

position:85031:-1
position: 85031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85170:-1
position: 85170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:84327-84467:-1:exon

position:84327:-1
position: 84327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84467:-1
position: 84467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:83996-84207:-1:exon

position:83996:-1
position: 83996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84207:-1
position: 84207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:83346-83496:-1:exon

position:83346:-1
position: 83346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83496:-1
position: 83496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:81553-81765:-1:exon

position:81553:-1
position: 81553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81765:-1
position: 81765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:81044-81251:-1:exon

position:81044:-1
position: 81044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81251:-1
position: 81251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:79710-79849:-1:exon

position:79710:-1
position: 79710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79849:-1
position: 79849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:79114-79242:-1:exon

position:79114:-1
position: 79114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79242:-1
position: 79242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:78438-78544:-1:exon

position:78438:-1
position: 78438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78544:-1
position: 78544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:77516-77732:-1:exon

position:77516:-1
position: 77516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77732:-1
position: 77732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:76768-76907:-1:exon

position:76768:-1
position: 76768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76907:-1
position: 76907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:76184-76346:-1:exon

position:76184:-1
position: 76184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76346:-1
position: 76346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:66161-66282:-1:exon

position:66282:-1
position: 66282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: CP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceruloplasmin isoform X1
translation: MKLLLLIGLLISCCCHAGAVNREYYIGITETVWNYAPGNASAISGQLFAEEDQAEVFLKRGPQRIGNTYKKAIYVQYTNHLYDEIIDKPSWLGFLGPVIKGEVGDSITIHLKNFASRNYTLHPHGVTYTKENEGAFYPDTTKDLQKRDDAVEPGGQYTYTWDVTEDQGPAEADADCITRAYHSHIDAPRDVASGLVGPLIICRKDTMNRDTDQHFDAEFILMFSVVDENLSWYLEDNIRTYCFEPSKVDKDDEDFQESNKMHSINGYMYGYLPNLTMCVEDKIKWYLFGMGNEADIHSAYFHGQTLIERHHRVDTISLFPATFVDAVMVPRSPGEWLLSCQVNDHIEGGMQALFKVEDCKKHTTSHSESTKIRQYFLAAEEIIWNYGPSAVNNFTGQELIVDSESQIFFEQSETRIGGSYKKAIYKEYTDGSFTEHKKRLAEEAHLGLLGPVIRAEVGERIRVTFRNSASRPFSIQPHGVSSRRSGAGARFGAAAAGTESPASHVSPGTTFTYEWDVPEDVGPTEQDPDCLTWLYYSAVDAVRDTSSGLVGPLLVCRKGALLSSGKQKNVNMEFFLLATVFDENLSWYLDDNILMFTLNPGKIDKDDEDFQESNKMHSINGYMYGNQPGLEMCKGSVVSWHLMGLGSEVDVHGIYFSENTFVTKGTRRDTANLFPHAVLTAIMKPDSEGIFEVSCLTADHYTGGMKQNYKVKKCHRGKEDVSTYLHEKIYYIAAVEVEWDYSPNRTWEFERHQYHEESPGNPFLNKDDKFIGSKYKKVVYREYTNQTFSILKNRAKEQQHLEIQGPLLVSNTGDKITIVFKNLASRPYSIHAHGVKTDSSVVAVTNPGDTKIYVWKVPERSSPGRGDSHCIAWAYHSTVDIVKDTYSGLIGTLVVCHRHYLPSFHTKKKVQFALLFMVFDENESWYLDENIKTYSTNPHLVHKEDEGFLESNKMHAINGKVFGNLHGLTMHVGENVSWYLMGMGNEVDIHTVHFHGHSFDYKQTGVYRADVFDLFPGTSQTVEMTPENPGTWLLHCHVTDHIHAGMEATYTVLPKEGGEV
SIO_010081: CP
subclass of: SO_0000673
so part of: CP
location: complement(join(66269..66282,76184..76346,76768..76907,77516..77732,78438..78544,79114..79242,79710..79849,81044..81251,81553..81765,83346..83496,83996..84207,84327..84467,85031..85170,86130..86295,87502..87756,88325..88498,89002..89214,90146..90390,91860..92014))
location: region:66269-92014:-1
so has part: feature:91860-92014:-1:exon
so has part: feature:90146-90390:-1:exon
so has part: feature:89002-89214:-1:exon
so has part: feature:88325-88498:-1:exon
so has part: feature:87502-87756:-1:exon
so has part: feature:86130-86295:-1:exon
so has part: feature:85031-85170:-1:exon
so has part: feature:84327-84467:-1:exon
so has part: feature:83996-84207:-1:exon
so has part: feature:83346-83496:-1:exon
so has part: feature:81553-81765:-1:exon
so has part: feature:81044-81251:-1:exon
so has part: feature:79710-79849:-1:exon
so has part: feature:79114-79242:-1:exon
so has part: feature:78438-78544:-1:exon
so has part: feature:77516-77732:-1:exon
so has part: feature:76768-76907:-1:exon
so has part: feature:76184-76346:-1:exon
so has part: feature:66269-66282:-1:exon

XP_021400597.1
type: Protein
SIO_000068: ncbiprotein

position:66269:-1
position: 66269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92014:-1
position: 92014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91860-92014:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90146-90390:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:89002-89214:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:88325-88498:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:87502-87756:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86130-86295:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:85031-85170:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:84327-84467:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:83996-84207:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:83346-83496:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:81553-81765:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:81044-81251:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:79710-79849:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:79114-79242:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:78438-78544:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:77516-77732:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:76768-76907:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:76184-76346:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:66269-66282:-1:exon

CP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: CP
product: ceruloplasmin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021544923.2
SIO_010081: CP
subclass of: SO_0000673
so part of: CP
location: complement(join(71059..75106,76184..76346,76768..76907,77516..77732,78438..78544,79114..79242,79710..79849,81044..81251,81553..81765,83346..83496,83996..84207,84327..84467,85031..85170,86130..86295,87502..87756,88325..88498,89002..89214,90146..90390,91860..92145))
location: region:71059-92145:-1
so has part: feature:91860-92145:-1:exon
so has part: feature:90146-90390:-1:exon
so has part: feature:89002-89214:-1:exon
so has part: feature:88325-88498:-1:exon
so has part: feature:87502-87756:-1:exon
so has part: feature:86130-86295:-1:exon
so has part: feature:85031-85170:-1:exon
so has part: feature:84327-84467:-1:exon
so has part: feature:83996-84207:-1:exon
so has part: feature:83346-83496:-1:exon
so has part: feature:81553-81765:-1:exon
so has part: feature:81044-81251:-1:exon
so has part: feature:79710-79849:-1:exon
so has part: feature:79114-79242:-1:exon
so has part: feature:78438-78544:-1:exon
so has part: feature:77516-77732:-1:exon
so has part: feature:76768-76907:-1:exon
so has part: feature:76184-76346:-1:exon
so has part: feature:71059-75106:-1:exon

position:71059:-1
position: 71059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92145:-1
position: 92145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91860-92145:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90146-90390:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:89002-89214:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:88325-88498:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:87502-87756:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86130-86295:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:85031-85170:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:84327-84467:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:83996-84207:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:83346-83496:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:81553-81765:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:81044-81251:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:79710-79849:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:79114-79242:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:78438-78544:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:77516-77732:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:76768-76907:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:76184-76346:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:71059-75106:-1:exon

position:75106:-1
position: 75106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: CP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceruloplasmin isoform X2
translation: MKLLLLIGLLISCCCHAGAVNREYYIGITETVWNYAPGNASAISGQLFAEEDQAEVFLKRGPQRIGNTYKKAIYVQYTNHLYDEIIDKPSWLGFLGPVIKGEVGDSITIHLKNFASRNYTLHPHGVTYTKENEGAFYPDTTKDLQKRDDAVEPGGQYTYTWDVTEDQGPAEADADCITRAYHSHIDAPRDVASGLVGPLIICRKDTMNRDTDQHFDAEFILMFSVVDENLSWYLEDNIRTYCFEPSKVDKDDEDFQESNKMHSINGYMYGYLPNLTMCVEDKIKWYLFGMGNEADIHSAYFHGQTLIERHHRVDTISLFPATFVDAVMVPRSPGEWLLSCQVNDHIEGGMQALFKVEDCKKHTTSHSESTKIRQYFLAAEEIIWNYGPSAVNNFTGQELIVDSESQIFFEQSETRIGGSYKKAIYKEYTDGSFTEHKKRLAEEAHLGLLGPVIRAEVGERIRVTFRNSASRPFSIQPHGVSSRRSGAGARFGAAAAGTESPASHVSPGTTFTYEWDVPEDVGPTEQDPDCLTWLYYSAVDAVRDTSSGLVGPLLVCRKGALLSSGKQKNVNMEFFLLATVFDENLSWYLDDNILMFTLNPGKIDKDDEDFQESNKMHSINGYMYGNQPGLEMCKGSVVSWHLMGLGSEVDVHGIYFSENTFVTKGTRRDTANLFPHAVLTAIMKPDSEGIFEVSCLTADHYTGGMKQNYKVKKCHRGKEDVSTYLHEKIYYIAAVEVEWDYSPNRTWEFERHQYHEESPGNPFLNKDDKFIGSKYKKVVYREYTNQTFSILKNRAKEQQHLEIQGPLLVSNTGDKITIVFKNLASRPYSIHAHGVKTDSSVVAVTNPGDTKIYVWKVPERSSPGRGDSHCIAWAYHSTVDIVKDTYSGLIGTLVVCHRHYLPSFHTKKKVQFALLFMVFDENESWYLDENIKTYSTNPHLVHKEDEGFLESNKMHAINGKVFGNLHGLTMHVGENVSWYLMGMGNEVDIHTVHFHGHSFDYKQTGVYRADVFDLFPGTSQTVEMTPENPGTWLLHCHVTDHIHAGMEATYTVLPKED
SIO_010081: CP
subclass of: SO_0000673
so part of: CP
location: complement(join(75102..75106,76184..76346,76768..76907,77516..77732,78438..78544,79114..79242,79710..79849,81044..81251,81553..81765,83346..83496,83996..84207,84327..84467,85031..85170,86130..86295,87502..87756,88325..88498,89002..89214,90146..90390,91860..92014))
location: region:75102-92014:-1
so has part: feature:91860-92014:-1:exon
so has part: feature:90146-90390:-1:exon
so has part: feature:89002-89214:-1:exon
so has part: feature:88325-88498:-1:exon
so has part: feature:87502-87756:-1:exon
so has part: feature:86130-86295:-1:exon
so has part: feature:85031-85170:-1:exon
so has part: feature:84327-84467:-1:exon
so has part: feature:83996-84207:-1:exon
so has part: feature:83346-83496:-1:exon
so has part: feature:81553-81765:-1:exon
so has part: feature:81044-81251:-1:exon
so has part: feature:79710-79849:-1:exon
so has part: feature:79114-79242:-1:exon
so has part: feature:78438-78544:-1:exon
so has part: feature:77516-77732:-1:exon
so has part: feature:76768-76907:-1:exon
so has part: feature:76184-76346:-1:exon
so has part: feature:75102-75106:-1:exon

XP_021400598.1
type: Protein
SIO_000068: ncbiprotein

position:75102:-1
position: 75102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91860-92014:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90146-90390:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:89002-89214:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:88325-88498:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:87502-87756:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86130-86295:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:85031-85170:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:84327-84467:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:83996-84207:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:83346-83496:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:81553-81765:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:81044-81251:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:79710-79849:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:79114-79242:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:78438-78544:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:77516-77732:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:76768-76907:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:76184-76346:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:75102-75106:-1:exon

TM4SF18
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TM4SF18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(96898..100968)
location: region:96898-100968:-1
so has part: feature:96898-100968:-1:exon
subclass of: SO_0000010

110478347
type: Gene
SIO_000068: ncbigene

position:96898:-1
position: 96898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100968:-1
position: 100968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96898-100968:-1:exon

TM4SF18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TM4SF18
product: transmembrane 4 L six family member 18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 8 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021544907.2
SIO_010081: TM4SF18
subclass of: SO_0000673
so part of: TM4SF18
location: complement(join(96898..97251,97661..97841,97938..98080,98731..98820,100395..100968))
location: region:96898-100968:-1
so has part: feature:100395-100968:-1:exon
so has part: feature:98731-98820:-1:exon
so has part: feature:97938-98080:-1:exon
so has part: feature:97661-97841:-1:exon
so has part: feature:96898-97251:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100395-100968:-1:exon

position:100395:-1
position: 100395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:98731-98820:-1:exon

position:98731:-1
position: 98731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98820:-1
position: 98820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:97938-98080:-1:exon

position:97938:-1
position: 97938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98080:-1
position: 98080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:97661-97841:-1:exon

position:97661:-1
position: 97661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97841:-1
position: 97841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:96898-97251:-1:exon

position:97251:-1
position: 97251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TM4SF18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TM4SF18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane 4 L6 family member 18
translation: MALETCGSCLSCLLVPLALWSIVVNILLYFPNGKALHAASYQSPNHEWYFEGICFSGVMILLLAVIMITLECSVFYRCCQSESCNKTYRSFVSIVLALLGIAFSGYSCIIFTLHLIQGPFCHSSSGWNYIFKDTAGGYLTDYPAWSKCTGPANIVEWNIILLSILIALSGLQLIICILKIAAELKRTLCGTYSVFVQAGIL
SIO_010081: TM4SF18
subclass of: SO_0000673
so part of: TM4SF18
location: complement(join(97237..97251,97661..97841,97938..98080,98731..98820,100395..100571))
location: region:97237-100571:-1
so has part: feature:100395-100571:-1:exon
so has part: feature:98731-98820:-1:exon
so has part: feature:97938-98080:-1:exon
so has part: feature:97661-97841:-1:exon
so has part: feature:97237-97251:-1:exon

XP_021400582.1
type: Protein
SIO_000068: ncbiprotein

position:97237:-1
position: 97237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100571:-1
position: 100571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100395-100571:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:98731-98820:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97938-98080:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97661-97841:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97237-97251:-1:exon

TM4SF1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TM4SF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(102103..134410)
location: region:102103-134410:-1
so has part: feature:102103-134410:-1:exon
subclass of: SO_0000010

110478362
type: Gene
SIO_000068: ncbigene

position:102103:-1
position: 102103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134410:-1
position: 134410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102103-134410:-1:exon

TM4SF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TM4SF1
product: transmembrane 4 L six family member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021544931.2
SIO_010081: TM4SF1
subclass of: SO_0000673
so part of: TM4SF1
location: complement(join(102103..104774,105706..105886,107256..107404,107492..107581,133927..134410))
location: region:102103-134410:-1
so has part: feature:133927-134410:-1:exon
so has part: feature:107492-107581:-1:exon
so has part: feature:107256-107404:-1:exon
so has part: feature:105706-105886:-1:exon
so has part: feature:102103-104774:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:133927-134410:-1:exon

position:133927:-1
position: 133927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:107492-107581:-1:exon

position:107492:-1
position: 107492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107581:-1
position: 107581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:107256-107404:-1:exon

position:107256:-1
position: 107256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107404:-1
position: 107404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:105706-105886:-1:exon

position:105706:-1
position: 105706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105886:-1
position: 105886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:102103-104774:-1:exon

position:104774:-1
position: 104774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TM4SF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TM4SF1
product: transmembrane 4 L six family member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021544933.2
SIO_010081: TM4SF1
subclass of: SO_0000673
so part of: TM4SF1
location: complement(join(102103..105886,107256..107404,107492..107581,109369..111341))
location: region:102103-111341:-1
so has part: feature:109369-111341:-1:exon
so has part: feature:107492-107581:-1:exon
so has part: feature:107256-107404:-1:exon
so has part: feature:102103-105886:-1:exon

position:111341:-1
position: 111341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109369-111341:-1:exon

position:109369:-1
position: 109369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:107492-107581:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107256-107404:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:102103-105886:-1:exon

TM4SF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TM4SF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane 4 L6 family member 1 isoform X1
translation: MALLPFGASCSPKARHPSQETSSKTSLGSLKVLVPAAVLIGLHNEDCCGCFGHEGCGKSCAMLSSVLAAFVGILGSGYCIIISALGLSQGPYCLTHLERNWIYPFTDSSGGYLFEYNKWSECQEPQNIVQWNITLFSILLVLGGIEFILCFIQIINGILGGLYGLCCSHEETYVC
SIO_010081: TM4SF1
subclass of: SO_0000673
so part of: TM4SF1
location: complement(join(104760..104774,105706..105886,107256..107404,107492..107581,133927..134019))
location: region:104760-134019:-1
so has part: feature:133927-134019:-1:exon
so has part: feature:107492-107581:-1:exon
so has part: feature:107256-107404:-1:exon
so has part: feature:105706-105886:-1:exon
so has part: feature:104760-104774:-1:exon

XP_021400606.1
type: Protein
SIO_000068: ncbiprotein

position:104760:-1
position: 104760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134019:-1
position: 134019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133927-134019:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107492-107581:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107256-107404:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:105706-105886:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:104760-104774:-1:exon

TM4SF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TM4SF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane 4 L6 family member 1 isoform X2
translation: MSFGKCARCVGYKLLILALLCIVANILLYFPNGETRFASEHHLSKYVECLHGILGGGFLVLVPAAVLIGLHNEDCCGCFGHEGCGKSCAMLSSVLAAFVGILGSGYCIIISALGLSQGPYCLTHLERNWIYPFTDSSGGYLFEYNKWSECQEPQNIVQWNITLFSILLVLGGIEFILCFIQIINGILGGLYGLCCSHEEVRSLQIYPCFSDEHVACYFSLLLKLLRSFTQLLLYRYS
SIO_010081: TM4SF1
subclass of: SO_0000673
so part of: TM4SF1
location: complement(join(105589..105886,107256..107404,107492..107581,109369..109545))
location: region:105589-109545:-1
so has part: feature:109369-109545:-1:exon
so has part: feature:107492-107581:-1:exon
so has part: feature:107256-107404:-1:exon
so has part: feature:105589-105886:-1:exon

XP_021400608.1
type: Protein
SIO_000068: ncbiprotein

position:105589:-1
position: 105589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109545:-1
position: 109545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109369-109545:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107492-107581:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107256-107404:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:105589-105886:-1:exon

TM4SF4
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TM4SF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 131469..137552
location: region:131469-137552:1
so has part: feature:131469-137552:1:exon
subclass of: SO_0000010

110478363
type: Gene
SIO_000068: ncbigene

position:131469:1
position: 131469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137552:1
position: 137552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131469-137552:1:exon

TM4SF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TM4SF4
product: transmembrane 4 L six family member 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021544934.2
SIO_010081: TM4SF4
subclass of: SO_0000673
so part of: TM4SF4
location: join(131469..131897,132138..132227,134247..134380,136917..137106,137332..137552)
location: region:131469-137552:1
so has part: feature:131469-131897:1:exon
so has part: feature:132138-132227:1:exon
so has part: feature:134247-134380:1:exon
so has part: feature:136917-137106:1:exon
so has part: feature:137332-137552:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:131469-131897:1:exon

position:131897:1
position: 131897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:132138-132227:1:exon

position:132138:1
position: 132138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132227:1
position: 132227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:134247-134380:1:exon

position:134247:1
position: 134247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134380:1
position: 134380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:136917-137106:1:exon

position:136917:1
position: 136917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137106:1
position: 137106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:137332-137552:1:exon

position:137332:1
position: 137332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TM4SF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TM4SF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane 4 L6 family member 4
translation: MCTGGCAKCLGSTLIPLAVLCTLANILLFFPGGKVVEDRTYITDEVWCFGGILGSGVLMIFPALVFLGLQNNDCCGCCGNRSCGKRFAMFSSIIFAAIGVLGAGYCFILSAVALNKGPKCKTGENWSYPFKAGDYLADHTLWERCTSPDNIVPWHLTLFSLLLVMSGIQAVLCGIQAVNGLFGTICGDCRCCGCCGGDGTV
SIO_010081: TM4SF4
subclass of: SO_0000673
so part of: TM4SF4
location: join(131724..131897,132138..132227,134247..134380,136917..137106,137332..137349)
location: region:131724-137349:1
so has part: feature:131724-131897:1:exon
so has part: feature:132138-132227:1:exon
so has part: feature:134247-134380:1:exon
so has part: feature:136917-137106:1:exon
so has part: feature:137332-137349:1:exon

XP_021400609.1
type: Protein
SIO_000068: ncbiprotein

position:131724:1
position: 131724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137349:1
position: 137349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131724-131897:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:132138-132227:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:134247-134380:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:136917-137106:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:137332-137349:1:exon

WWTR1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: WWTR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(140377..183910)
location: region:140377-183910:-1
so has part: feature:140377-183910:-1:exon
subclass of: SO_0000010

110478361
type: Gene
SIO_000068: ncbigene

position:140377:-1
position: 140377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183910:-1
position: 183910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140377-183910:-1:exon

WWTR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: WWTR1
product: WW domain containing transcription regulator 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021544926.1
SIO_010081: WWTR1
subclass of: SO_0000673
so part of: WWTR1
location: complement(join(140377..143932,145000..145112,145665..145798,150401..150597,161200..161336,183522..183910))
location: region:140377-183910:-1
so has part: feature:183522-183910:-1:exon
so has part: feature:161200-161336:-1:exon
so has part: feature:150401-150597:-1:exon
so has part: feature:145665-145798:-1:exon
so has part: feature:145000-145112:-1:exon
so has part: feature:140377-143932:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:183522-183910:-1:exon

position:183522:-1
position: 183522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:161200-161336:-1:exon

position:161200:-1
position: 161200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161336:-1
position: 161336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:150401-150597:-1:exon

position:150401:-1
position: 150401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150597:-1
position: 150597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:145665-145798:-1:exon

position:145665:-1
position: 145665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145798:-1
position: 145798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:145000-145112:-1:exon

position:145000:-1
position: 145000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145112:-1
position: 145112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:140377-143932:-1:exon

position:143932:-1
position: 143932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WWTR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: WWTR1
product: WW domain containing transcription regulator 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021544928.2
SIO_010081: WWTR1
subclass of: SO_0000673
so part of: WWTR1
location: complement(join(143544..143932,145000..145112,145665..145798,150401..150597,161200..161336,164116..165051))
location: region:143544-165051:-1
so has part: feature:164116-165051:-1:exon
so has part: feature:161200-161336:-1:exon
so has part: feature:150401-150597:-1:exon
so has part: feature:145665-145798:-1:exon
so has part: feature:145000-145112:-1:exon
so has part: feature:143544-143932:-1:exon

position:143544:-1
position: 143544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165051:-1
position: 165051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164116-165051:-1:exon

position:164116:-1
position: 164116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:161200-161336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150401-150597:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:145665-145798:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:145000-145112:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:143544-143932:-1:exon

WWTR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: WWTR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WW domain-containing transcription regulator protein 1 isoform X1
translation: MNPAAAAPPPGQQVIHVTQDLDTELEALFNAVMNPRPSSWRKKILPESFFREPDSGSHSRQSSTDSGGPPPRLAPVHVRSHSSPASLPGAGAAPQHGHLRQRSCDVADERPLPPGWEMALTQTGQRYFLNHIEKITTWQDPRKPMNQALNHLSHHPAAMSTPAPQRTMAMSQPNLMMNAQPQLPPSTALLQQSRPPQPPALLTLPSALTTQQQQQQQKLRLQRIQMERERIRMRQEELLRQEAALCRQLPMDSENMVPVQTAVNTPAMTQDMRPITNNGSDPFLNSGPYHSREQSTDSGLGLGCYSIPTTPEDFLSNVDEMDTGETIAQTTMNINPQQTRFPDFLDCLPGTNVDLGTLESEDLIPILNDVESVLNKNEPFLTWL
SIO_010081: WWTR1
subclass of: SO_0000673
so part of: WWTR1
location: complement(join(143748..143932,145000..145112,145665..145798,150401..150597,161200..161336,183522..183910))
location: region:143748-183910:-1
so has part: feature:183522-183910:-1:exon
so has part: feature:161200-161336:-1:exon
so has part: feature:150401-150597:-1:exon
so has part: feature:145665-145798:-1:exon
so has part: feature:145000-145112:-1:exon
so has part: feature:143748-143932:-1:exon

XP_021400601.1
type: Protein
SIO_000068: ncbiprotein

position:143748:-1
position: 143748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183522-183910:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:161200-161336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150401-150597:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:145665-145798:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:145000-145112:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:143748-143932:-1:exon

WWTR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: WWTR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WW domain-containing transcription regulator protein 1 isoform X2
translation: MNASDFQYTFFLCCFCLQGAEGQREGWAMPWLCSGRCKQISQCLSLDGWRCSKADHIEKITTWQDPRKPMNQALNHLSHHPAAMSTPAPQRTMAMSQPNLMMNAQPQLPPSTALLQQSRPPQPPALLTLPSALTTQQQQQQQKLRLQRIQMERERIRMRQEELLRQEAALCRQLPMDSENMVPVQTAVNTPAMTQDMRPITNNGSDPFLNSGPYHSREQSTDSGLGLGCYSIPTTPEDFLSNVDEMDTGETIAQTTMNINPQQTRFPDFLDCLPGTNVDLGTLESEDLIPILNDVESVLNKNEPFLTWL
SIO_010081: WWTR1
subclass of: SO_0000673
so part of: WWTR1
location: complement(join(143748..143932,145000..145112,145665..145798,150401..150597,161200..161336,164116..164279))
location: region:143748-164279:-1
so has part: feature:164116-164279:-1:exon
so has part: feature:161200-161336:-1:exon
so has part: feature:150401-150597:-1:exon
so has part: feature:145665-145798:-1:exon
so has part: feature:145000-145112:-1:exon
so has part: feature:143748-143932:-1:exon

XP_021400603.1
type: Protein
SIO_000068: ncbiprotein

position:164279:-1
position: 164279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164116-164279:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:161200-161336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150401-150597:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:145665-145798:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:145000-145112:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:143748-143932:-1:exon

COMMD2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: COMMD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(186620..191799)
location: region:186620-191799:-1
so has part: feature:186620-191799:-1:exon
subclass of: SO_0000010

110478364
type: Gene
SIO_000068: ncbigene

position:186620:-1
position: 186620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191799:-1
position: 191799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186620-191799:-1:exon

COMMD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: COMMD2
product: COMM domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_021544935.2
SIO_010081: COMMD2
subclass of: SO_0000673
so part of: COMMD2
location: complement(join(186620..188912,189398..189571,190818..190900,191541..191618,191704..191799))
location: region:186620-191799:-1
so has part: feature:191704-191799:-1:exon
so has part: feature:191541-191618:-1:exon
so has part: feature:190818-190900:-1:exon
so has part: feature:189398-189571:-1:exon
so has part: feature:186620-188912:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:191704-191799:-1:exon

position:191704:-1
position: 191704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:191541-191618:-1:exon

position:191541:-1
position: 191541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191618:-1
position: 191618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:190818-190900:-1:exon

position:190818:-1
position: 190818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190900:-1
position: 190900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:189398-189571:-1:exon

position:189398:-1
position: 189398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189571:-1
position: 189571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:186620-188912:-1:exon

position:188912:-1
position: 188912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

COMMD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: COMMD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COMM domain-containing protein 2
translation: MLLVLSAEHRAHLGCLPRAGGAALGELGRLALEQLRRGAAPRACESAARKLNISVDIIQHGVEGLVYLLTESSKLMISEVDFQDSIHVLGFSDELNKSLLQLYLDNRKEIRSILGELAPRLPSYHSLEWRLDVQLASRSLRQQIKPAVTMKLHLNQNEDQTAQVLQTDPATLLHLIQQLEQALGEMKMNHCRRIVRNMK
SIO_010081: COMMD2
subclass of: SO_0000673
so part of: COMMD2
location: complement(join(188715..188912,189398..189571,190818..190900,191541..191618,191704..191770))
location: region:188715-191770:-1
so has part: feature:191704-191770:-1:exon
so has part: feature:191541-191618:-1:exon
so has part: feature:190818-190900:-1:exon
so has part: feature:189398-189571:-1:exon
so has part: feature:188715-188912:-1:exon

XP_021400610.1
type: Protein
SIO_000068: ncbiprotein

position:188715:-1
position: 188715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191770:-1
position: 191770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191704-191770:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:191541-191618:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:190818-190900:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:189398-189571:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:188715-188912:-1:exon

RNF13
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: RNF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 192220..213197
location: region:192220-213197:1
so has part: feature:192220-213197:1:exon
subclass of: SO_0000010

110478365
type: Gene
SIO_000068: ncbigene

position:192220:1
position: 192220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213197:1
position: 213197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192220-213197:1:exon

RNF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: RNF13
product: ring finger protein 13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_021544936.2
SIO_010081: RNF13
subclass of: SO_0000673
so part of: RNF13
location: join(192220..192322,195775..195902,198693..198773,202901..203026,205383..205470,207209..207299,207798..207903,209930..210023,210375..210455,211729..213197)
location: region:192220-213197:1
so has part: feature:192220-192322:1:exon
so has part: feature:195775-195902:1:exon
so has part: feature:198693-198773:1:exon
so has part: feature:202901-203026:1:exon
so has part: feature:205383-205470:1:exon
so has part: feature:207209-207299:1:exon
so has part: feature:207798-207903:1:exon
so has part: feature:209930-210023:1:exon
so has part: feature:210375-210455:1:exon
so has part: feature:211729-213197:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:192220-192322:1:exon

position:192322:1
position: 192322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:195775-195902:1:exon

position:195775:1
position: 195775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195902:1
position: 195902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:198693-198773:1:exon

position:198693:1
position: 198693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198773:1
position: 198773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:202901-203026:1:exon

position:202901:1
position: 202901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203026:1
position: 203026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:205383-205470:1:exon

position:205383:1
position: 205383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205470:1
position: 205470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:207209-207299:1:exon

position:207209:1
position: 207209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207299:1
position: 207299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:207798-207903:1:exon

position:207798:1
position: 207798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207903:1
position: 207903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:209930-210023:1:exon

position:209930:1
position: 209930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210023:1
position: 210023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:210375-210455:1:exon

position:210375:1
position: 210375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210455:1
position: 210455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:211729-213197:1:exon

position:211729:1
position: 211729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RNF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: RNF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF13
translation: MLLSIGMLMLSATQIYTIVTVQLFAFLNLLPVEADILAYNLENGTRTFDDLPARFGYRLPAEGLKGFLINSKPENACEPIAPPPLRDNSSGAFIVLIRRLECNFDVKVLNAQRAGYKAAIVHNVDSDDLISMGSNDIEVLKKIDIPSVFIGETSANSLKEEFTYEKGGHIVLIPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSETDSSQEENEVSENTPLLRPLASVSTQSFGALSESHSHQNMTESSEYEEDDNDNVDSSDAENGMNEESVVVQLQPSEDREYRVANTV
SIO_010081: RNF13
subclass of: SO_0000673
so part of: RNF13
location: join(195789..195902,198693..198773,202901..203026,205383..205470,207209..207299,207798..207903,209930..210023,210375..210455,211729..212093)
location: region:195789-212093:1
so has part: feature:195789-195902:1:exon
so has part: feature:198693-198773:1:exon
so has part: feature:202901-203026:1:exon
so has part: feature:205383-205470:1:exon
so has part: feature:207209-207299:1:exon
so has part: feature:207798-207903:1:exon
so has part: feature:209930-210023:1:exon
so has part: feature:210375-210455:1:exon
so has part: feature:211729-212093:1:exon

XP_021400611.1
type: Protein
SIO_000068: ncbiprotein

position:195789:1
position: 195789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212093:1
position: 212093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195789-195902:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:198693-198773:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202901-203026:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:205383-205470:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:207209-207299:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:207798-207903:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:209930-210023:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:210375-210455:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:211729-212093:1:exon

PFN2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: PFN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(215242..220525)
location: region:215242-220525:-1
so has part: feature:215242-220525:-1:exon
subclass of: SO_0000010

110478367
type: Gene
SIO_000068: ncbigene

position:215242:-1
position: 215242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220525:-1
position: 220525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215242-220525:-1:exon

PFN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PFN2
product: profilin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 64 ESTs, 11 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_021544937.1
SIO_010081: PFN2
subclass of: SO_0000673
so part of: PFN2
location: complement(join(215242..217274,219089..219281,220260..220525))
location: region:215242-220525:-1
so has part: feature:220260-220525:-1:exon
so has part: feature:219089-219281:-1:exon
so has part: feature:215242-217274:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:220260-220525:-1:exon

position:220260:-1
position: 220260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:219089-219281:-1:exon

position:219089:-1
position: 219089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219281:-1
position: 219281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:215242-217274:-1:exon

position:217274:-1
position: 217274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PFN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PFN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: profilin-2
translation: MAGWQSYVDNLMCDGCCQEAAIVGYCDAKYVWAATAGGIFQSITPGEIDMIVGKDREGFFTNGLTLGAKKCSVIRDSLYVDGDCTMDIRTKSQGGEPTYNVAVGRAGRVLVFVMGKEGVHGGGLNKKAYSMAKYLRDSGF
SIO_010081: PFN2
subclass of: SO_0000673
so part of: PFN2
location: complement(join(217177..217274,219089..219281,220260..220391))
location: region:217177-220391:-1
so has part: feature:220260-220391:-1:exon
so has part: feature:219089-219281:-1:exon
so has part: feature:217177-217274:-1:exon

XP_021400612.1
type: Protein
SIO_000068: ncbiprotein

position:217177:-1
position: 217177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220391:-1
position: 220391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220260-220391:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:219089-219281:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217177-217274:-1:exon

LOC110478368
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110478368
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 220766..255814
location: region:220766-255814:1
so has part: feature:220766-255814:1:exon
subclass of: SO_0000011

110478368
type: Gene
SIO_000068: ncbigene

position:220766:1
position: 220766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255814:1
position: 255814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220766-255814:1:exon

LOC110478368
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110478368
product: uncharacterized LOC110478368, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002466751.1
SIO_010081: LOC110478368
subclass of: SO_0000673
so part of: LOC110478368
location: join(220766..220871,242139..242222,244102..244496,244800..244901,254170..254775,255558..255814)
location: region:220766-255814:1
so has part: feature:220766-220871:1:exon
so has part: feature:242139-242222:1:exon
so has part: feature:244102-244496:1:exon
so has part: feature:244800-244901:1:exon
so has part: feature:254170-254775:1:exon
so has part: feature:255558-255814:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:220766-220871:1:exon

position:220871:1
position: 220871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:242139-242222:1:exon

position:242139:1
position: 242139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242222:1
position: 242222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:244102-244496:1:exon

position:244102:1
position: 244102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244496:1
position: 244496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:244800-244901:1:exon

position:244800:1
position: 244800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244901:1
position: 244901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:254170-254775:1:exon

position:254170:1
position: 254170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254775:1
position: 254775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:255558-255814:1:exon

position:255558:1
position: 255558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110478368
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110478368
product: uncharacterized LOC110478368, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_002466747.1
SIO_010081: LOC110478368
subclass of: SO_0000673
so part of: LOC110478368
location: join(220766..220871,242139..242222,244102..244496,248237..248391,251164..251385,254170..254775,255558..255814)
location: region:220766-255814:1
so has part: feature:220766-220871:1:exon
so has part: feature:242139-242222:1:exon
so has part: feature:244102-244496:1:exon
so has part: feature:248237-248391:1:exon
so has part: feature:251164-251385:1:exon
so has part: feature:254170-254775:1:exon
so has part: feature:255558-255814:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:220766-220871:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242139-242222:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:244102-244496:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:248237-248391:1:exon

position:248237:1
position: 248237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248391:1
position: 248391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:251164-251385:1:exon

position:251164:1
position: 251164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251385:1
position: 251385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:254170-254775:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:255558-255814:1:exon

LOC110478368
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110478368
product: uncharacterized LOC110478368, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002466750.1
SIO_010081: LOC110478368
subclass of: SO_0000673
so part of: LOC110478368
location: join(220766..220871,242139..242222,244102..244496,248237..248391,254170..254775,255558..255814)
location: region:220766-255814:1
so has part: feature:220766-220871:1:exon
so has part: feature:242139-242222:1:exon
so has part: feature:244102-244496:1:exon
so has part: feature:248237-248391:1:exon
so has part: feature:254170-254775:1:exon
so has part: feature:255558-255814:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:220766-220871:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242139-242222:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:244102-244496:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:248237-248391:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:254170-254775:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:255558-255814:1:exon

LOC110478368
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110478368
product: uncharacterized LOC110478368, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_002466748.1
SIO_010081: LOC110478368
subclass of: SO_0000673
so part of: LOC110478368
location: join(220766..220871,242139..242222,244102..244496,251164..251385,254170..254775,255558..255814)
location: region:220766-255814:1
so has part: feature:220766-220871:1:exon
so has part: feature:242139-242222:1:exon
so has part: feature:244102-244496:1:exon
so has part: feature:251164-251385:1:exon
so has part: feature:254170-254775:1:exon
so has part: feature:255558-255814:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:220766-220871:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242139-242222:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:244102-244496:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251164-251385:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:254170-254775:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:255558-255814:1:exon

LOC110478368
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110478368
product: uncharacterized LOC110478368, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_002466745.1
SIO_010081: LOC110478368
subclass of: SO_0000673
so part of: LOC110478368
location: join(220766..220871,242139..242222,244102..244496,254170..254775,255558..255814)
location: region:220766-255814:1
so has part: feature:220766-220871:1:exon
so has part: feature:242139-242222:1:exon
so has part: feature:244102-244496:1:exon
so has part: feature:254170-254775:1:exon
so has part: feature:255558-255814:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:220766-220871:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242139-242222:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:244102-244496:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:254170-254775:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:255558-255814:1:exon

LOC110478368
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110478368
product: uncharacterized LOC110478368, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002466746.2
SIO_010081: LOC110478368
subclass of: SO_0000673
so part of: LOC110478368
location: join(220800..220871,229258..229417,231497..231699,242139..242222,244102..244496,254170..254775,255558..255814)
location: region:220800-255814:1
so has part: feature:220800-220871:1:exon
so has part: feature:229258-229417:1:exon
so has part: feature:231497-231699:1:exon
so has part: feature:242139-242222:1:exon
so has part: feature:244102-244496:1:exon
so has part: feature:254170-254775:1:exon
so has part: feature:255558-255814:1:exon

position:220800:1
position: 220800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220800-220871:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:229258-229417:1:exon

position:229258:1
position: 229258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229417:1
position: 229417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:231497-231699:1:exon

position:231497:1
position: 231497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231699:1
position: 231699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:242139-242222:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:244102-244496:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:254170-254775:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:255558-255814:1:exon

TSC22D2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TSC22D2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 279367..303941
location: region:279367-303941:1
so has part: feature:279367-303941:1:exon
subclass of: SO_0000010

110478369
type: Gene
SIO_000068: ncbigene

position:279367:1
position: 279367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303941:1
position: 303941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279367-303941:1:exon

TSC22D2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TSC22D2
product: TSC22 domain family member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_021544939.2
SIO_010081: TSC22D2
subclass of: SO_0000673
so part of: TSC22D2
location: join(279367..281769,295238..295309,301496..301547,302300..303941)
location: region:279367-303941:1
so has part: feature:279367-281769:1:exon
so has part: feature:295238-295309:1:exon
so has part: feature:301496-301547:1:exon
so has part: feature:302300-303941:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:279367-281769:1:exon

position:281769:1
position: 281769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:295238-295309:1:exon

position:295238:1
position: 295238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295309:1
position: 295309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:301496-301547:1:exon

position:301496:1
position: 301496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301547:1
position: 301547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:302300-303941:1:exon

position:302300:1
position: 302300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TSC22D2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TSC22D2
product: TSC22 domain family member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021544940.2
SIO_010081: TSC22D2
subclass of: SO_0000673
so part of: TSC22D2
location: join(279367..281769,301496..301547,302300..303941)
location: region:279367-303941:1
so has part: feature:279367-281769:1:exon
so has part: feature:301496-301547:1:exon
so has part: feature:302300-303941:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:279367-281769:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301496-301547:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:302300-303941:1:exon

TSC22D2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TSC22D2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TSC22 domain family protein 2 isoform X1
translation: MSKMPAKKKSCFQITSVTTAQVASSITEDTESLDDPDESRTEDVSSEIFDVSRATDYGPEDVCERSSSEETLNNVGEAETPSSVSPNLLLDGQLAVAAAGVAAGPNGGAVPKSSAVPLPAAAPGTAVGGGSSAQAAPSSSGPSAPTAPGAMSQTAAAACSSRFRVIKLDHGTGEPYRRGRWTCMEYYDRDTDGGGVLGRTGDCIRHSSTFEQAAQERDSGLGATGGSVVISAVPASAHGPDSIADSSLAAVSQLLQTEKMNQSSLQQPNFVIGQQQQPQQPVGGAVPQSAAQPVFSGASGASQQMIVPQQPQPQVNPQGVSQAGPNGKGMAPPNVTVGQPSIPVAQQQVQQANIPVTQPQQFAYSQSQIPPVHLLPTQPPGQAEYMQHMTIMQSQGAIQQATTSSAPSTVASSLPVGQVTGQNPSPVGASVMGVSAQPSEAVGQGSGLLQSQAQASQPALPQPGGVVQPGLGHTGVVQQKSVTQHPVGGSGQVSGMPGAPHAVVPGVQSVPAVVPGTSVPSASTTASATMPNVPVTLVQSQLTSHPPVSRSTGAVQSQHVGHSMMQGAPSTPASLPQASLGQFQTQAQSLAGQIDDTRRKSEPLPQPPLSLIAENKPLVKPPIPDTLANPLQLPASTPMNSLASSVFGISIPVDGDEDRNPSTAFYQAFHFNKLHESKTTWDSASGASVVAIDNKIEQAMDLVKSHLMYAVREEVEVLKEQIKELVERNSLLERENALLKSLSNNDQLSQLSSQQAPSSTSQAQPPQPNVSSA
SIO_010081: TSC22D2
subclass of: SO_0000673
so part of: TSC22D2
location: join(279794..281769,295238..295309,301496..301547,302300..302521)
location: region:279794-302521:1
so has part: feature:279794-281769:1:exon
so has part: feature:295238-295309:1:exon
so has part: feature:301496-301547:1:exon
so has part: feature:302300-302521:1:exon

XP_021400614.1
type: Protein
SIO_000068: ncbiprotein

position:279794:1
position: 279794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302521:1
position: 302521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279794-281769:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295238-295309:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:301496-301547:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:302300-302521:1:exon

TSC22D2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TSC22D2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TSC22 domain family protein 2 isoform X2
translation: MSKMPAKKKSCFQITSVTTAQVASSITEDTESLDDPDESRTEDVSSEIFDVSRATDYGPEDVCERSSSEETLNNVGEAETPSSVSPNLLLDGQLAVAAAGVAAGPNGGAVPKSSAVPLPAAAPGTAVGGGSSAQAAPSSSGPSAPTAPGAMSQTAAAACSSRFRVIKLDHGTGEPYRRGRWTCMEYYDRDTDGGGVLGRTGDCIRHSSTFEQAAQERDSGLGATGGSVVISAVPASAHGPDSIADSSLAAVSQLLQTEKMNQSSLQQPNFVIGQQQQPQQPVGGAVPQSAAQPVFSGASGASQQMIVPQQPQPQVNPQGVSQAGPNGKGMAPPNVTVGQPSIPVAQQQVQQANIPVTQPQQFAYSQSQIPPVHLLPTQPPGQAEYMQHMTIMQSQGAIQQATTSSAPSTVASSLPVGQVTGQNPSPVGASVMGVSAQPSEAVGQGSGLLQSQAQASQPALPQPGGVVQPGLGHTGVVQQKSVTQHPVGGSGQVSGMPGAPHAVVPGVQSVPAVVPGTSVPSASTTASATMPNVPVTLVQSQLTSHPPVSRSTGAVQSQHVGHSMMQGAPSTPASLPQASLGQFQTQAQSLAGQIDDTRRKSEPLPQPPLSLIAENKPLVKPPIPDTLANPLQLPASTPMNSLASSVFGISIPVDGDEDSASGASVVAIDNKIEQAMDLVKSHLMYAVREEVEVLKEQIKELVERNSLLERENALLKSLSNNDQLSQLSSQQAPSSTSQAQPPQPNVSSA
SIO_010081: TSC22D2
subclass of: SO_0000673
so part of: TSC22D2
location: join(279794..281769,301496..301547,302300..302521)
location: region:279794-302521:1
so has part: feature:279794-281769:1:exon
so has part: feature:301496-301547:1:exon
so has part: feature:302300-302521:1:exon

XP_021400615.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279794-281769:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301496-301547:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:302300-302521:1:exon

SERP1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SERP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(307139..309146)
location: region:307139-309146:-1
so has part: feature:307139-309146:-1:exon
subclass of: SO_0000010

110478371
type: Gene
SIO_000068: ncbigene

position:307139:-1
position: 307139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309146:-1
position: 309146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307139-309146:-1:exon

SERP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SERP1
product: stress associated endoplasmic reticulum protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 8 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_021544942.1
SIO_010081: SERP1
subclass of: SO_0000673
so part of: SERP1
location: complement(join(307139..308493,308746..308821,308913..309146))
location: region:307139-309146:-1
so has part: feature:308913-309146:-1:exon
so has part: feature:308746-308821:-1:exon
so has part: feature:307139-308493:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:308913-309146:-1:exon

position:308913:-1
position: 308913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:308746-308821:-1:exon

position:308746:-1
position: 308746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308821:-1
position: 308821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:307139-308493:-1:exon

position:308493:-1
position: 308493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SERP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SERP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stress-associated endoplasmic reticulum protein 1
translation: MVAKQRIRMANEKHSKNITQRGNVAKTSRTAPEEKASVGPWLLALFIFVVCGSAIFQIIQSIRMGM
SIO_010081: SERP1
subclass of: SO_0000673
so part of: SERP1
location: complement(join(308453..308493,308746..308821,308913..308996))
location: region:308453-308996:-1
so has part: feature:308913-308996:-1:exon
so has part: feature:308746-308821:-1:exon
so has part: feature:308453-308493:-1:exon

XP_021400617.1
type: Protein
SIO_000068: ncbiprotein

position:308453:-1
position: 308453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308996:-1
position: 308996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308913-308996:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:308746-308821:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:308453-308493:-1:exon

EIF2A
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: EIF2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 309098..322140
location: region:309098-322140:1
so has part: feature:309098-322140:1:exon
subclass of: SO_0000010

110478370
type: Gene
SIO_000068: ncbigene

position:309098:1
position: 309098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322140:1
position: 322140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309098-322140:1:exon

EIF2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: EIF2A
product: eukaryotic translation initiation factor 2A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021544941.1
SIO_010081: EIF2A
subclass of: SO_0000673
so part of: EIF2A
location: join(309098..309208,310215..310284,310556..310630,311267..311385,312405..312504,312876..312958,314127..314200,314341..314485,315519..315635,317763..318334,319614..319730,320553..320681,321562..321627,321703..322140)
location: region:309098-322140:1
so has part: feature:309098-309208:1:exon
so has part: feature:310215-310284:1:exon
so has part: feature:310556-310630:1:exon
so has part: feature:311267-311385:1:exon
so has part: feature:312405-312504:1:exon
so has part: feature:312876-312958:1:exon
so has part: feature:314127-314200:1:exon
so has part: feature:314341-314485:1:exon
so has part: feature:315519-315635:1:exon
so has part: feature:317763-318334:1:exon
so has part: feature:319614-319730:1:exon
so has part: feature:320553-320681:1:exon
so has part: feature:321562-321627:1:exon
so has part: feature:321703-322140:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:309098-309208:1:exon

position:309208:1
position: 309208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:310215-310284:1:exon

position:310215:1
position: 310215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310284:1
position: 310284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:310556-310630:1:exon

position:310556:1
position: 310556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310630:1
position: 310630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:311267-311385:1:exon

position:311267:1
position: 311267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311385:1
position: 311385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:312405-312504:1:exon

position:312405:1
position: 312405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312504:1
position: 312504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:312876-312958:1:exon

position:312876:1
position: 312876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312958:1
position: 312958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:314127-314200:1:exon

position:314127:1
position: 314127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314200:1
position: 314200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:314341-314485:1:exon

position:314341:1
position: 314341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314485:1
position: 314485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:315519-315635:1:exon

position:315519:1
position: 315519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315635:1
position: 315635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:317763-318334:1:exon

position:317763:1
position: 317763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318334:1
position: 318334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:319614-319730:1:exon

position:319614:1
position: 319614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319730:1
position: 319730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:320553-320681:1:exon

position:320553:1
position: 320553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320681:1
position: 320681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:321562-321627:1:exon

position:321562:1
position: 321562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321627:1
position: 321627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:321703-322140:1:exon

position:321703:1
position: 321703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EIF2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: EIF2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 2A
translation: MAPPTPLLAVRGSEGLYMVNGPPSFTESAAFQRDSGKNCKAVAFSKDGSLFAWCNGEKVNVVNVTRAELLHSFDFPKTVCLEFSPKNNVLATWQGYATAKDGTAGVPNLQLHDLRTGKCLKSFVQKKMQNWCPCWADDESICARNVNNEVHFFENNNFNTIANKLHLQKVSDFVLSPGAQPTKVAVYVPGSKGAPSFVRLYQYPNFGGPQSALANKSFFKADKVTMLWNKKATAVLVVASTEVDKSGASYYGEQTLHYVAASGESAVVQLPKNGPIYDVAWSPNSVEFCAVYGFMPAKATVFNLKCDPVFDFGTGPRNAAYYSPHGHILVLAGFGNLRGQMEVWDVKNYKLISKPVASDSTYFAWCPDGEHIVTATCAPRLRVSNGFKIWHYTGSVLHAHEVPADEEMWQVFWQPFLDGVFPERAVRYQAVPGQLPRAEPRPAQAYRPPALRNRPATSSKLHEDEPPQNMKPQLGGCDKPLSKTALKNQRKHEAKKAAKQEAKADAHQGPAQIKTPQNALQNTVPAMTTGDPEVDKKIKNLKKKLKAIEQLKEQAAAGKQLEKNQVEKIQKEAALLKELEDLELGV
SIO_010081: EIF2A
subclass of: SO_0000673
so part of: EIF2A
location: join(309181..309208,310215..310284,310556..310630,311267..311385,312405..312504,312876..312958,314127..314200,314341..314485,315519..315635,317763..318334,319614..319730,320553..320681,321562..321627,321703..321768)
location: region:309181-321768:1
so has part: feature:309181-309208:1:exon
so has part: feature:310215-310284:1:exon
so has part: feature:310556-310630:1:exon
so has part: feature:311267-311385:1:exon
so has part: feature:312405-312504:1:exon
so has part: feature:312876-312958:1:exon
so has part: feature:314127-314200:1:exon
so has part: feature:314341-314485:1:exon
so has part: feature:315519-315635:1:exon
so has part: feature:317763-318334:1:exon
so has part: feature:319614-319730:1:exon
so has part: feature:320553-320681:1:exon
so has part: feature:321562-321627:1:exon
so has part: feature:321703-321768:1:exon

XP_021400616.1
type: Protein
SIO_000068: ncbiprotein

position:309181:1
position: 309181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321768:1
position: 321768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309181-309208:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310215-310284:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:310556-310630:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:311267-311385:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:312405-312504:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312876-312958:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:314127-314200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:314341-314485:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315519-315635:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:317763-318334:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:319614-319730:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:320553-320681:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:321562-321627:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:321703-321768:1:exon

SELENOT
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SELENOT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 322254..328506
location: region:322254-328506:1
so has part: feature:322254-328506:1:exon
subclass of: SO_0000010

110478372
type: Gene
SIO_000068: ncbigene

position:322254:1
position: 322254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328506:1
position: 328506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322254-328506:1:exon

SELENOT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SELENOT
product: selenoprotein T
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 46 ESTs, 5 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_021544943.2
SIO_010081: SELENOT
subclass of: SO_0000673
so part of: SELENOT
location: join(322254..322443,323620..323730,324772..324898,326129..326216,326918..327069,327720..328506)
location: region:322254-328506:1
so has part: feature:322254-322443:1:exon
so has part: feature:323620-323730:1:exon
so has part: feature:324772-324898:1:exon
so has part: feature:326129-326216:1:exon
so has part: feature:326918-327069:1:exon
so has part: feature:327720-328506:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:322254-322443:1:exon

position:322443:1
position: 322443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:323620-323730:1:exon

position:323620:1
position: 323620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323730:1
position: 323730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:324772-324898:1:exon

position:324772:1
position: 324772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324898:1
position: 324898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:326129-326216:1:exon

position:326129:1
position: 326129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326216:1
position: 326216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:326918-327069:1:exon

position:326918:1
position: 326918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327069:1
position: 327069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:327720-328506:1:exon

position:327720:1
position: 327720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SELENOT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SELENOT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:323627..323629,aa:Sec)
product: thioredoxin reductase-like selenoprotein T
translation: MRAAGLRRRLLLLLLLAGLAAAPGGGGAAAAEQGGLPAKKLRMAYATGPLLKFQICVSUGYRRVFEEYMRVISQRYPDIRIEGENYLPQPIYRHIASFLSVFKLVLIGLIIVGKDPFAFFGMQAPSIWQWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESGHLPSMQQLVQILDNEMKLNVHMESMSHHRS
SIO_010081: SELENOT
subclass of: SO_0000673
so part of: SELENOT
location: join(322277..322443,323620..323730,324772..324898,326129..326216,326918..327042)
location: region:322277-327042:1
so has part: feature:322277-322443:1:exon
so has part: feature:323620-323730:1:exon
so has part: feature:324772-324898:1:exon
so has part: feature:326129-326216:1:exon
so has part: feature:326918-327042:1:exon

XP_021400618.1
type: Protein
SIO_000068: ncbiprotein

position:322277:1
position: 322277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327042:1
position: 327042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322277-322443:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:323620-323730:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:324772-324898:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:326129-326216:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:326918-327042:1:exon

ERICH6
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: ERICH6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(329369..334987)
location: region:329369-334987:-1
so has part: feature:329369-334987:-1:exon
subclass of: SO_0000010

110478343
type: Gene
SIO_000068: ncbigene

position:329369:-1
position: 329369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334987:-1
position: 334987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329369-334987:-1:exon

ERICH6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ERICH6
product: glutamate rich 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031505675.1
SIO_010081: ERICH6
subclass of: SO_0000673
so part of: ERICH6
location: complement(join(329369..329635,330029..330254,330526..330678,331022..331107,331244..331734,332523..332584,333524..333681,333758..333859,334670..334987))
location: region:329369-334987:-1
so has part: feature:334670-334987:-1:exon
so has part: feature:333758-333859:-1:exon
so has part: feature:333524-333681:-1:exon
so has part: feature:332523-332584:-1:exon
so has part: feature:331244-331734:-1:exon
so has part: feature:331022-331107:-1:exon
so has part: feature:330526-330678:-1:exon
so has part: feature:330029-330254:-1:exon
so has part: feature:329369-329635:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:334670-334987:-1:exon

position:334670:-1
position: 334670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:333758-333859:-1:exon

position:333758:-1
position: 333758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333859:-1
position: 333859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:333524-333681:-1:exon

position:333524:-1
position: 333524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333681:-1
position: 333681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:332523-332584:-1:exon

position:332523:-1
position: 332523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332584:-1
position: 332584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:331244-331734:-1:exon

position:331244:-1
position: 331244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331734:-1
position: 331734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:331022-331107:-1:exon

position:331022:-1
position: 331022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331107:-1
position: 331107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:330526-330678:-1:exon

position:330526:-1
position: 330526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330678:-1
position: 330678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:330029-330254:-1:exon

position:330029:-1
position: 330029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330254:-1
position: 330254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:329369-329635:-1:exon

position:329635:-1
position: 329635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ERICH6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ERICH6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate-rich protein 6
translation: MEGPGTEQPGTERPGTDGPGTERPGTERPGTDGPGMEGPGWAAEPSGAADDGEGEPRWPPPPEEDTGHPAEPRCETALASPQPTPTGLPTLLAYRPESSQANIHHEQAEEDAEPTCEYCGNLLRPFPFSEDAPLSEDQEERFCCERSRELYEFIVKEKKRLEDVSSLPRTVSTHESLGSEANLLLSKEQDNQRQQKRHLAIELSESLRPSATKGSRQAGSISYEPSQELSSPEGGTPVPAANAAEPESEPEPEPEPQPEEKLEPKTRPKEEPEPEPRPKEEPELELQPEEPELEPWPEKEPELELRPEEEPESELRPEEEPESELRPEEEPELEKEPGPEPESSPEEKPKCKLKKEQDKKPTSRGVLGYDFSLLGKKVGKGKLVQKYYKNGKKFLTILPDGPSQLFYPSGNLAIIITQARDQLMCIVQEDEPRTTKIRALFQSDGRSTCYYPTGDEWINMSIQGGQYLDQAGNRVRKWMWPNLSPGPQVPLSPIFISLNRHVGVRILAQDKIFVSFLAMGRQAKFNMGTKVQVSTSSQLPPPAQLGEDELLLLAFRVRILQICDRMRGCINFPSSEQWNKMQPPLYLMTQAVKILELCMAADISDELHSSIKAIVNAQQF
SIO_010081: ERICH6
subclass of: SO_0000673
so part of: ERICH6
location: complement(join(329369..329635,330029..330254,330526..330678,331022..331107,331244..331734,332523..332584,333524..333681,333758..333859,334670..334987))
location: region:329369-334987:-1
so has part: feature:334670-334987:-1:exon
so has part: feature:333758-333859:-1:exon
so has part: feature:333524-333681:-1:exon
so has part: feature:332523-332584:-1:exon
so has part: feature:331244-331734:-1:exon
so has part: feature:331022-331107:-1:exon
so has part: feature:330526-330678:-1:exon
so has part: feature:330029-330254:-1:exon
so has part: feature:329369-329635:-1:exon

XP_031361535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:334670-334987:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:333758-333859:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:333524-333681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:332523-332584:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:331244-331734:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:331022-331107:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:330526-330678:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:330029-330254:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:329369-329635:-1:exon

SIAH2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SIAH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(336582..340009)
location: region:336582-340009:-1
so has part: feature:336582-340009:-1:exon
subclass of: SO_0000010

110478348
type: Gene
SIO_000068: ncbigene

position:336582:-1
position: 336582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340009:-1
position: 340009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336582-340009:-1:exon

SIAH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SIAH2
product: siah E3 ubiquitin protein ligase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_021544908.2
SIO_010081: SIAH2
subclass of: SO_0000673
so part of: SIAH2
location: complement(join(336582..339019,339610..340009))
location: region:336582-340009:-1
so has part: feature:339610-340009:-1:exon
so has part: feature:336582-339019:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:339610-340009:-1:exon

position:339610:-1
position: 339610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:336582-339019:-1:exon

position:339019:-1
position: 339019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SIAH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SIAH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase SIAH2
translation: MSRPSSAGPGPSKPCGKQQQHAPSPAAVLPGTGGASPPPPPPPPLPPPQQQQQQQQELTSLFECPICFDYILPPILQCQAGHLVCKQCRQQLSLCPTCRGSLTPNIRNLAMEKVASAVLFPCKYATTGCSLTLHHTEKPKHEAICEYRPYSCPCPGTSCDWEGSLEAVMSHLMHAHKSITTLQGEDIIFLATDINLPGAVDWVMMQSCFGHHFMLVLKKQEKCEGHQQFFATVLLIGTRKQAENFQYRLELHSSCHRLTWEASPCSIHDGVSMAIRNSNCLIFDTATAHLFADNGNLGINVTISMCCP
SIO_010081: SIAH2
subclass of: SO_0000673
so part of: SIAH2
location: complement(join(338462..339019,339610..339978))
location: region:338462-339978:-1
so has part: feature:339610-339978:-1:exon
so has part: feature:338462-339019:-1:exon

XP_021400583.1
type: Protein
SIO_000068: ncbiprotein

position:338462:-1
position: 338462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339978:-1
position: 339978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339610-339978:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:338462-339019:-1:exon

MINDY4B
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: MINDY4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(341223..348303)
location: region:341223-348303:-1
so has part: feature:341223-348303:-1:exon
subclass of: SO_0000010

116183968
type: Gene
SIO_000068: ncbigene

position:341223:-1
position: 341223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348303:-1
position: 348303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341223-348303:-1:exon

MINDY4B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: MINDY4B
product: MINDY family member 4B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 34% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031505676.1
SIO_010081: MINDY4B
subclass of: SO_0000673
so part of: MINDY4B
location: complement(join(341223..341719,343086..343266,343344..343499,343816..343885,344042..344112,344638..344703,345092..345257,345514..345605,346432..346551,347237..347374,347930..347957,348209..348303))
location: region:341223-348303:-1
so has part: feature:348209-348303:-1:exon
so has part: feature:347930-347957:-1:exon
so has part: feature:347237-347374:-1:exon
so has part: feature:346432-346551:-1:exon
so has part: feature:345514-345605:-1:exon
so has part: feature:345092-345257:-1:exon
so has part: feature:344638-344703:-1:exon
so has part: feature:344042-344112:-1:exon
so has part: feature:343816-343885:-1:exon
so has part: feature:343344-343499:-1:exon
so has part: feature:343086-343266:-1:exon
so has part: feature:341223-341719:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:348209-348303:-1:exon

position:348209:-1
position: 348209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:347930-347957:-1:exon

position:347930:-1
position: 347930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347957:-1
position: 347957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:347237-347374:-1:exon

position:347237:-1
position: 347237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347374:-1
position: 347374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:346432-346551:-1:exon

position:346432:-1
position: 346432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346551:-1
position: 346551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:345514-345605:-1:exon

position:345514:-1
position: 345514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345605:-1
position: 345605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:345092-345257:-1:exon

position:345092:-1
position: 345092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345257:-1
position: 345257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:344638-344703:-1:exon

position:344638:-1
position: 344638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344703:-1
position: 344703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:344042-344112:-1:exon

position:344042:-1
position: 344042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344112:-1
position: 344112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:343816-343885:-1:exon

position:343816:-1
position: 343816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343885:-1
position: 343885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:343344-343499:-1:exon

position:343344:-1
position: 343344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343499:-1
position: 343499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:343086-343266:-1:exon

position:343086:-1
position: 343086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343266:-1
position: 343266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:341223-341719:-1:exon

position:341719:-1
position: 341719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MINDY4B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: MINDY4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive ubiquitin carboxyl-terminal hydrolase MINDY-4B
translation: MGDRGAGHTALEEIASRISDLSKWREIFSFRGLEISSTTHQQGRSSAAHGSPEAREPPGSQPPSSVPQPLLLPQGVGGRPIPPDTAMRLQKLLFRSTAPLFSGEWAAAHFRFHPPHSDLAYALQAGKGGTRPILAAVQAHIITYLLFTRETECTHLERLCRVGRWEQGQALATALAETLWAAGGGGRAVVCLVTAPITTMPRESYRVNSFTERIRLFKFSEKAAAQGFISDHINSFKGEGSHGVILFLYSLLFSRTLERVQEDLGDTAPLLNISSGNVSCTEAVLSLLLTGRASPELGGSRQPQPGAADGGGAAPWQRGPVGFLRWERAPVERQVSPGLRTPRLPVWLCSVSGRHSVLFGTDRRLISDWKSERIFHLYFYTGQQEQTQTAHLTIDTHSHHWEEAQREGPCSPGKRRPALEMAIRTKWAGATVSWNGTDPFF
SIO_010081: MINDY4B
subclass of: SO_0000673
so part of: MINDY4B
location: complement(join(341577..341719,343086..343266,343344..343499,343816..343885,344042..344112,344638..344703,345092..345257,345514..345605,346432..346551,347237..347374,347930..347957,348209..348303))
location: region:341577-348303:-1
so has part: feature:348209-348303:-1:exon
so has part: feature:347930-347957:-1:exon
so has part: feature:347237-347374:-1:exon
so has part: feature:346432-346551:-1:exon
so has part: feature:345514-345605:-1:exon
so has part: feature:345092-345257:-1:exon
so has part: feature:344638-344703:-1:exon
so has part: feature:344042-344112:-1:exon
so has part: feature:343816-343885:-1:exon
so has part: feature:343344-343499:-1:exon
so has part: feature:343086-343266:-1:exon
so has part: feature:341577-341719:-1:exon

XP_031361536.1
type: Protein
SIO_000068: ncbiprotein

position:341577:-1
position: 341577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348209-348303:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:347930-347957:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347237-347374:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:346432-346551:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:345514-345605:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:345092-345257:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:344638-344703:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:344042-344112:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:343816-343885:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:343344-343499:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:343086-343266:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:341577-341719:-1:exon

CLRN1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: CLRN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(349173..355400)
location: region:349173-355400:-1
so has part: feature:349173-355400:-1:exon
subclass of: SO_0000010

110478350
type: Gene
SIO_000068: ncbigene

position:349173:-1
position: 349173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355400:-1
position: 355400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349173-355400:-1:exon

CLRN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: CLRN1
product: clarin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021544909.2
SIO_010081: CLRN1
subclass of: SO_0000673
so part of: CLRN1
location: complement(join(349173..351008,351939..352118,355140..355400))
location: region:349173-355400:-1
so has part: feature:355140-355400:-1:exon
so has part: feature:351939-352118:-1:exon
so has part: feature:349173-351008:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:355140-355400:-1:exon

position:355140:-1
position: 355140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:351939-352118:-1:exon

position:351939:-1
position: 351939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352118:-1
position: 352118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:349173-351008:-1:exon

position:351008:-1
position: 351008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CLRN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: CLRN1
product: clarin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021544910.2
SIO_010081: CLRN1
subclass of: SO_0000673
so part of: CLRN1
location: complement(join(349173..351047,351939..352118,355140..355400))
location: region:349173-355400:-1
so has part: feature:355140-355400:-1:exon
so has part: feature:351939-352118:-1:exon
so has part: feature:349173-351047:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:355140-355400:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:351939-352118:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:349173-351047:-1:exon

position:351047:-1
position: 351047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CLRN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: CLRN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: clarin-1 isoform X1
translation: MPAQQKKLIFCTAGVLSLACALGTAAAVGTQLWVRGSILCSTGALLVNASGPELHKFLGHIQYGLFGGQRVRQCGLGGRPLQFSFFPDLLRIIPASIHVSVILFCTVLIVFALVGAGFFMFNAFGSPYETLHGPLGLYLWSFISCSCGCLIMILFSSEVKIHHLSEKIANFKEGTFTFKTHSEQFANSFWTILVCSLVHFLNALLIRFAGFEFPFSKPKDSGTVTGAVDLMY
SIO_010081: CLRN1
subclass of: SO_0000673
so part of: CLRN1
location: complement(join(350743..351008,351939..352118,355140..355392))
location: region:350743-355392:-1
so has part: feature:355140-355392:-1:exon
so has part: feature:351939-352118:-1:exon
so has part: feature:350743-351008:-1:exon

XP_021400584.1
type: Protein
SIO_000068: ncbiprotein

position:350743:-1
position: 350743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355392:-1
position: 355392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355140-355392:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:351939-352118:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:350743-351008:-1:exon

CLRN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: CLRN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: clarin-1 isoform X2
translation: MPAQQKKLIFCTAGVLSLACALGTAAAVGTQLWVRGSILCSTGALLVNASGPELHKFLGHIQYGLFGGQRVRQCGLGGRPLQFSFFPDLLRIIPASIHVSVILFCTVLIVFALVGAGFFMFNAFGSPYETLHGPLGLYLWSFISWIAEMMSLSPSLSGSCGCLIMILFSSEVKIHHLSEKIANFKEGTFTFKTHSEQFANSFWTILVCSLVHFLNALLIRFAGFEFPFSKPKDSGTVTGAVDLMY
SIO_010081: CLRN1
subclass of: SO_0000673
so part of: CLRN1
location: complement(join(350743..351047,351939..352118,355140..355392))
location: region:350743-355392:-1
so has part: feature:355140-355392:-1:exon
so has part: feature:351939-352118:-1:exon
so has part: feature:350743-351047:-1:exon

XP_021400585.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:355140-355392:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:351939-352118:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:350743-351047:-1:exon

GPR171
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: GPR171
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(364258..366492)
location: region:364258-366492:-1
so has part: feature:364258-366492:-1:exon
subclass of: SO_0000010

110478354
type: Gene
SIO_000068: ncbigene

position:364258:-1
position: 364258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366492:-1
position: 366492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364258-366492:-1:exon

GPR171
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: GPR171
product: G protein-coupled receptor 171
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021544915.1
SIO_010081: GPR171
subclass of: SO_0000673
so part of: GPR171
location: complement(join(364258..365188,366411..366492))
location: region:364258-366492:-1
so has part: feature:366411-366492:-1:exon
so has part: feature:364258-365188:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:366411-366492:-1:exon

position:366411:-1
position: 366411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:364258-365188:-1:exon

position:365188:-1
position: 365188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPR171
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: GPR171
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 171
translation: MSSNISECHLYEEMEPFTYFYYLIFLLGIIGSCFALWAFTQKDQKQKCMSIYLINLLTADFLLTLTLPVKIIVDLGIASWNLRIFHCQVTACFIYLNMYLSIIFLGLVSMDCCLQLMRSSKIYRIQEPGFAKTLSAVVWAMVLFITVPNMAIPIKHIEERPGAGCIDFKTKLGRDWHVFTNFICTAIFLNSSAVVLVSNCLAVRQLRRHRRGERGGRARRALAHVLLVTATYLLCFVPFHAVRVPYTLSQGDASASCRLRRALFKAKECTLLLAVSNLCFDPFSTTTFPGRSD
SIO_010081: GPR171
subclass of: SO_0000673
so part of: GPR171
location: complement(364258..365139)
location: region:364258-365139:-1
so has part: feature:364258-365139:-1:exon

XP_021400590.1
type: Protein
SIO_000068: ncbiprotein

position:365139:-1
position: 365139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364258-365139:-1:exon

P2RY14
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: P2RY14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(368476..376439)
location: region:368476-376439:-1
so has part: feature:368476-376439:-1:exon
subclass of: SO_0000010

110478351
type: Gene
SIO_000068: ncbigene

position:368476:-1
position: 368476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376439:-1
position: 376439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368476-376439:-1:exon

P2RY14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: P2RY14
product: purinergic receptor P2Y14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021544911.2
SIO_010081: P2RY14
subclass of: SO_0000673
so part of: P2RY14
location: complement(join(368476..370397,376271..376439))
location: region:368476-376439:-1
so has part: feature:376271-376439:-1:exon
so has part: feature:368476-370397:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:376271-376439:-1:exon

position:376271:-1
position: 376271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:368476-370397:-1:exon

position:370397:-1
position: 370397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

P2RY14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: P2RY14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2Y purinoceptor 14
translation: MFNSSSSSSGNNCSHSTVITTTVIPLLYCFIFLAGLSLNALAAWVFLYVSSTKSFIVYLKNIAVADLLMCLTFPFKILADSELAPAELSLFVCRYSAVVFYMNMYIGIAFFGLIGFDRYYKIVKPLFTSFVHTVNYSKVVSAIIWLLLMIMSFPNMILTNEITKDNSSRKCIGLKSELGRQWHKATTYICTGIFWIVFFLLIIFYTSISKKIYSSYKKFRRNSDMAKRKTSRNIFTIMFVFVICFVPYHLCRTPYTLSQTSSHFTCQSQKSLYYAKEFTLVLSAANVCLDPIIYFFLCLPFREKLYQKLHLKLKASSEVEISKSRRSNTLRESINIV
SIO_010081: P2RY14
subclass of: SO_0000673
so part of: P2RY14
location: complement(369366..370379)
location: region:369366-370379:-1
so has part: feature:369366-370379:-1:exon

XP_021400586.1
type: Protein
SIO_000068: ncbiprotein

position:369366:-1
position: 369366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370379:-1
position: 370379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369366-370379:-1:exon

GPR87
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: GPR87
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(383931..394709)
location: region:383931-394709:-1
so has part: feature:383931-394709:-1:exon
subclass of: SO_0000010

110478344
type: Gene
SIO_000068: ncbigene

position:383931:-1
position: 383931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394709:-1
position: 394709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383931-394709:-1:exon

GPR87
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: GPR87
product: G protein-coupled receptor 87
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins
transcript id: XM_021544905.1
SIO_010081: GPR87
subclass of: SO_0000673
so part of: GPR87
location: complement(join(383931..384961,394700..394709))
location: region:383931-394709:-1
so has part: feature:394700-394709:-1:exon
so has part: feature:383931-384961:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:394700-394709:-1:exon

position:394700:-1
position: 394700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:383931-384961:-1:exon

position:384961:-1
position: 384961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPR87
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: GPR87
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 87
translation: MVTDNPLGPDNGSSPNASSRGRAAQDEFTTIVLPVLYLVIFLASLLLNGLAVWIFFHIRNKTSFIFYLKNIVVADLLMTLTFPFKIIQDSRLGPWHFNSFLCRYTTVLFYANMYTTIVFLGLISIDRYLKVVKPFGDSRMYSITFTKILSACVWVVMAFLALPNLILTNGYPTKRNVDDCLKLKSPLGVKWHSAVVYINTCTFVVVLIVLIGCYIAISRYIYKSSKQFISSSSRKRKHNQSIRVVVAVFFTCFLPYHLCRIPFTFSHLDKILDDSAHRILYYCKEMTLFLSACNVCLDPIIYFFMCRSFSRRLFRKSNMRTRSESIRSLQSVRRSEVRIYHEYTDV
SIO_010081: GPR87
subclass of: SO_0000673
so part of: GPR87
location: complement(join(383931..384961,394700..394709))
location: region:383931-394709:-1
so has part: feature:394700-394709:-1:exon
so has part: feature:383931-384961:-1:exon

XP_021400580.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:394700-394709:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:383931-384961:-1:exon

P2RY13
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: P2RY13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(400440..402295)
location: region:400440-402295:-1
so has part: feature:400440-402295:-1:exon
subclass of: SO_0000010

110478352
type: Gene
SIO_000068: ncbigene

position:400440:-1
position: 400440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402295:-1
position: 402295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400440-402295:-1:exon

P2RY13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: P2RY13
product: purinergic receptor P2Y13, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 20 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021544913.2
SIO_010081: P2RY13
subclass of: SO_0000673
so part of: P2RY13
location: complement(join(400440..401661,402147..402295))
location: region:400440-402295:-1
so has part: feature:402147-402295:-1:exon
so has part: feature:400440-401661:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:402147-402295:-1:exon

position:402147:-1
position: 402147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:400440-401661:-1:exon

position:401661:-1
position: 401661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

P2RY13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: P2RY13
product: purinergic receptor P2Y13, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021544912.1
SIO_010081: P2RY13
subclass of: SO_0000673
so part of: P2RY13
location: complement(join(400440..401661,402137..402189))
location: region:400440-402189:-1
so has part: feature:402137-402189:-1:exon
so has part: feature:400440-401661:-1:exon

position:402189:-1
position: 402189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402137-402189:-1:exon

position:402137:-1
position: 402137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:400440-401661:-1:exon

P2RY13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: P2RY13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2Y purinoceptor 13 isoform X1
translation: MRKETTRQQKKVSSFYTFPHSYHFARGSCWQRNSSWDGDSHRRLCDGCRSLFPVMGDSANTSSVGNASGAPSSARCPRDTTVTHLLFPVLYTFVFLLGLVLNSLACWAFFHIPSTSTFIVYLKNILVSDFIMTLMLPLKILTDSGLGPWQLKAFVCRFSAVIFYDTMYISIVLLGLIAFDRFLKIVRPFGKFWVQNLTSAKILASLVWLFFLVLSLPNMILSNKTATPQSVRKCASLKSYLGLKWHEAVNYVCQFIFWTVLILMLLFYVIIAKKVYESYIKTQKKGNRSEKRIKGKVFIIFTVFFLCFAPFHFSRVPYTLSQTSAHMDCRLQNQLFVAKESTLWLAATNVCMDPLIYLFLCKPFVEKVLCSRVKALQRTSQTSPKTELDTRVSPTES
SIO_010081: P2RY13
subclass of: SO_0000673
so part of: P2RY13
location: complement(join(400617..401661,402147..402295))
location: region:400617-402295:-1
so has part: feature:402147-402295:-1:exon
so has part: feature:400617-401661:-1:exon

XP_021400588.2
type: Protein
SIO_000068: ncbiprotein

position:400617:-1
position: 400617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402147-402295:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:400617-401661:-1:exon

P2RY13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: P2RY13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2Y purinoceptor 13 isoform X2
translation: MGTATGASATAAAGLSSLFPVMGDSANTSSVGNASGAPSSARCPRDTTVTHLLFPVLYTFVFLLGLVLNSLACWAFFHIPSTSTFIVYLKNILVSDFIMTLMLPLKILTDSGLGPWQLKAFVCRFSAVIFYDTMYISIVLLGLIAFDRFLKIVRPFGKFWVQNLTSAKILASLVWLFFLVLSLPNMILSNKTATPQSVRKCASLKSYLGLKWHEAVNYVCQFIFWTVLILMLLFYVIIAKKVYESYIKTQKKGNRSEKRIKGKVFIIFTVFFLCFAPFHFSRVPYTLSQTSAHMDCRLQNQLFVAKESTLWLAATNVCMDPLIYLFLCKPFVEKVLCSRVKALQRTSQTSPKTELDTRVSPTES
SIO_010081: P2RY13
subclass of: SO_0000673
so part of: P2RY13
location: complement(join(400617..401661,402137..402186))
location: region:400617-402186:-1
so has part: feature:402137-402186:-1:exon
so has part: feature:400617-401661:-1:exon

XP_021400587.1
type: Protein
SIO_000068: ncbiprotein

position:402186:-1
position: 402186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402137-402186:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:400617-401661:-1:exon

P2RY12
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: P2RY12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(404165..409381)
location: region:404165-409381:-1
so has part: feature:404165-409381:-1:exon
subclass of: SO_0000010

110478353
type: Gene
SIO_000068: ncbigene

position:404165:-1
position: 404165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409381:-1
position: 409381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404165-409381:-1:exon

P2RY12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: P2RY12
product: purinergic receptor P2Y12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031505600.1
SIO_010081: P2RY12
subclass of: SO_0000673
so part of: P2RY12
location: complement(join(404165..405893,406645..406905,409065..409381))
location: region:404165-409381:-1
so has part: feature:409065-409381:-1:exon
so has part: feature:406645-406905:-1:exon
so has part: feature:404165-405893:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:409065-409381:-1:exon

position:409065:-1
position: 409065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:406645-406905:-1:exon

position:406645:-1
position: 406645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406905:-1
position: 406905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:404165-405893:-1:exon

position:405893:-1
position: 405893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

P2RY12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: P2RY12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2Y purinoceptor 12
translation: MQMKVTTQFSSSRNDSNCTSDSRISQVIFPLLYTFLFLVGITMNGLAMWVFFKISSKSNFIIFLKNTVISDFLMILTFPFKILSDAKLVSWVLRGFVCQVTQVVFYFTMYISILFLGLITIDRYQKASSPFRTATPRSLLAAKILSTAIWVSMFALSLPNMILNNKKKTPKNVRKCALLKSEFGLVWHEIVNYICQLIFWVNLAVIVVCYILISKELYKSYKRTRCTGKASKKTVNLKVFIIIAVFFICFVPFHFTRIPYTLSQTRDVFDCSAQNTLFYLKETTLWLTSLNACLDPFIYFFLCKSFRRSLLGMLCKHGAVPGLGARGHKGADDSDETPL
SIO_010081: P2RY12
subclass of: SO_0000673
so part of: P2RY12
location: complement(404857..405876)
location: region:404857-405876:-1
so has part: feature:404857-405876:-1:exon

XP_031361460.1
type: Protein
SIO_000068: ncbiprotein

position:404857:-1
position: 404857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405876:-1
position: 405876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404857-405876:-1:exon

IGSF10
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: IGSF10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(422297..434389)
location: region:422297-434389:-1
so has part: feature:422297-434389:-1:exon
subclass of: SO_0000010

110478345
type: Gene
SIO_000068: ncbigene

position:422297:-1
position: 422297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434389:-1
position: 434389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422297-434389:-1:exon

IGSF10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: IGSF10
product: immunoglobulin superfamily member 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 35% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021544906.1
SIO_010081: IGSF10
subclass of: SO_0000673
so part of: IGSF10
location: complement(join(422297..424205,424848..425164,425201..425772,426959..427132,428676..431501,432008..432398,433027..433156,434196..434389))
location: region:422297-434389:-1
so has part: feature:434196-434389:-1:exon
so has part: feature:433027-433156:-1:exon
so has part: feature:432008-432398:-1:exon
so has part: feature:428676-431501:-1:exon
so has part: feature:426959-427132:-1:exon
so has part: feature:425201-425772:-1:exon
so has part: feature:424848-425164:-1:exon
so has part: feature:422297-424205:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:434196-434389:-1:exon

position:434196:-1
position: 434196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:433027-433156:-1:exon

position:433027:-1
position: 433027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433156:-1
position: 433156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:432008-432398:-1:exon

position:432008:-1
position: 432008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432398:-1
position: 432398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:428676-431501:-1:exon

position:428676:-1
position: 428676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431501:-1
position: 431501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:426959-427132:-1:exon

position:426959:-1
position: 426959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427132:-1
position: 427132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:425201-425772:-1:exon

position:425201:-1
position: 425201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425772:-1
position: 425772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:424848-425164:-1:exon

position:424848:-1
position: 424848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425164:-1
position: 425164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:422297-424205:-1:exon

position:424205:-1
position: 424205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IGSF10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: IGSF10
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(426960..426962),aa:OTHER)
product: LOW QUALITY PROTEIN: immunoglobulin superfamily member 10
translation: MGAPRGERPRWLATLLAACLATLPAGSACPRPCACHGSAELHCTFRYFSAVPPRIPPDVQRINLGYNSLRKLSPTDFAGLEKLELLMLHSNEISTIPEKVFSDLRSLQVLKMSYNKVRVLQQDVFYGLNSLVRLHMDHNQIEFVNPNVFYGLTSLRLVHLDGNLLQQLHPDTFVTLRYSQIFRISFLKHISLSDNVLTSLPQEMFSYMSELESIYLHGNPWSCDCSLQGFAGWAQERPDVIKCRKERSSGVQQCPVCASPKTHHGKSLVDLPPASFTCTKPVIHDSLKSRNLTVPDDGDFSFVSPKDLTAPLGSVALNMTDQAGNRGNMVCNVQRPKEMSPISFDKNGPSRVLKTSFSAFLVCGIDAEQIQQLWSVLALYSSSPLKLERTVRMADEPFSSYKYEQILSEKDELFTSVEAELRAEPAWLLQSQVSLQLDRTASTLSTLRVRYAAEARLAVPSGGEEQARHPWAIIARDNSTQTEHTVLVGGSVELGCQAAGEPAPAVEWILADGSKVRAPHISEDGRIAVLKSGVLTLRTADVFDSGLYHCIGTNHEDADALPFRITVVDPQVEHSGLNGARLSAAPGSTLQLPCTSTAAPDAAVTWVLPEHTILRHSAGNKHILANGTLRIQGVTERDAGYFRCVAANRYGADLLVFQVLMRQEETAPKKKHGAPGEWEEGSGDELPGSAAAQRHPSGTAATLRAHGGSAASAASGRGAQSARQGNSHGKTPHRPHADRAGRRFRAHRRQFVSSGRRADPQRWAALLEKTKRNSTVTDKRGEAATEAPIQVHKLSEVPEEEEETSGDLVSPEEEFMIPAAGRSPAPARGRGTELTITAGPGETANPPPAWDSSLLPTEPLTPLPSPLPHSVAPASKRLQMLPKPTDPWERSALSQISANGVKQPAVPSGAATLFPAGQKSVYSGESNNQHLKSASTTPTTEATGKAVTPQSTADKLHIFTDSIDNVSTKTDHRVPVATVNAPSSEFGPIYFHSTQKGGAPNLPLASTLATHQQIQVIQEVPTHPPQLQQHYGRQRKISGRRRIVRPGRVPSMRKHQYNFGRPGSARGSTAVATGVQVNMSYVPTFNNLSSSINPFSPETPQSSPSTMNMPLEHPMGTHQNTAFLKEEEKKHSARQKAATTATSVTAEDAATTATSGVGVMGLKPTVTLVTTPRTNTSITKSSASRNHFSKPTIVGGNVATLTLLENSGAFIPCEATGNPPPTIQWTKIPSGELDKPLXRRGAGAGRWAVLPNGTLAIARAGPQDGGQYLCTAANARGEARLLLTLAVRARPPRIAGARGRLLTAHSGAAVALPCRAQGSPPPRVSWLLPNGTELRDSSAGGGRALVRPDGTLLVRALTVYDRGLYTCRASSPAGSDALAVRLQVVAAPPSILEESRQSVAAAAGQSLSLPCTARGQPQPGVHWVLPGGAPLQPLQPLHGRLRLLPNGTLHLGSAAPADSGTYECIATSSTGSDRRVVSLVVQRRETPPKIAIASRELTRLDFGERLLLNCTAGGEPAPRIIWRLPSKAVVDQWHRMGSRIHVYPNGSLAVEAVTEKDAGDYLCVARNRIGEDLILMKVSITMKPAKIDHKQQFKKLVPYGKDFRVDCKASGSPTPEISWGLPDGTVVNNAMLADDSGHRARRYVLFGNGTLYLNKAGVAEEGDYTCYAQNMLGRDEMKIHITVIVAAPQIKHNYKTHITVAAGDAALLDCEASGEPRAQIFWLLPSSEMISSSTDRHSLHANGSLSISQASLLDSGEYLCVAQNPGGDDTKLYKLDVAAKPPIINGLYRNKTIMKVTAVRHSKKHIDCRAEGTPPPQIMWIMPDNIFLTAPYYGSRIVVHKNGTLEIRNIRPSDTADFICVARNDAGETVLVVQLEVTEMLRRPMFKNPFNEKIIAKPGKTTTLNCSVDGNPPPDISWMLPNGTWFSSSISTSQFFTGGDGTLTIYSPERQHAGRYRCAARNQVGYIEKLMVLEVAQKPNILSRPAGLVTGVSGEPLSLH…
SIO_010081: IGSF10
subclass of: SO_0000673
so part of: IGSF10
location: complement(join(422297..424205,424848..425164,425201..425772,426959..427132,428676..431501,432008..432398,433027..433156,434196..434389))
location: region:422297-434389:-1
so has part: feature:434196-434389:-1:exon
so has part: feature:433027-433156:-1:exon
so has part: feature:432008-432398:-1:exon
so has part: feature:428676-431501:-1:exon
so has part: feature:426959-427132:-1:exon
so has part: feature:425201-425772:-1:exon
so has part: feature:424848-425164:-1:exon
so has part: feature:422297-424205:-1:exon

XP_021400581.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:434196-434389:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:433027-433156:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:432008-432398:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:428676-431501:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:426959-427132:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:425201-425772:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:424848-425164:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:422297-424205:-1:exon

AADAC
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: AADAC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 471464..478921
location: region:471464-478921:1
so has part: feature:471464-478921:1:exon
subclass of: SO_0000010

110479913
type: Gene
SIO_000068: ncbigene

position:471464:1
position: 471464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478921:1
position: 478921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471464-478921:1:exon

AADAC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: AADAC
product: arylacetamide deacetylase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021547504.1
SIO_010081: AADAC
subclass of: SO_0000673
so part of: AADAC
location: join(471464..471654,475053..475275,475479..475548,475882..476053,477142..478921)
location: region:471464-478921:1
so has part: feature:471464-471654:1:exon
so has part: feature:475053-475275:1:exon
so has part: feature:475479-475548:1:exon
so has part: feature:475882-476053:1:exon
so has part: feature:477142-478921:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:471464-471654:1:exon

position:471654:1
position: 471654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:475053-475275:1:exon

position:475053:1
position: 475053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475275:1
position: 475275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:475479-475548:1:exon

position:475479:1
position: 475479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475548:1
position: 475548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:475882-476053:1:exon

position:475882:1
position: 475882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476053:1
position: 476053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:477142-478921:1:exon

position:477142:1
position: 477142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AADAC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: AADAC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylacetamide deacetylase
translation: MGARLLCLCLLTALLGYYIYSPLPEDLAQPWTVMLTSASLRALGHLAEAAELLGLMNYMEGLRLFTALELVAPTSDENVTVADTELGSVPVRLFVPRRAPGGLRRAVVYFHGGGWCVGDAGMRGYDLMSRRISNEINAVVVSVNYRLAPPHRFPAQFEDAYSVTKFFLQSQVLSQYGVDPARVCVAGDSAGGNLAAAVAQQLVEDPEVKTKLRAQLLIYPALQVLDLDLPSYRDNAEKPMLPRSLMVRFWSEYFASDPALREAMASNRHVPAEAAQLLPLVNWSRWLPAEMRGAHAYASPAVGDTELARRYPGLLDPRASPLLAGEARLRRLPRTLVLTCEHDVLRDDGAMYAGRLRQAGVPVTHLHAKDAFHGAVTFLAGPLELAVAHRLLDACVGWLRENL
SIO_010081: AADAC
subclass of: SO_0000673
so part of: AADAC
location: join(471517..471654,475053..475275,475479..475548,475882..476053,477142..477750)
location: region:471517-477750:1
so has part: feature:471517-471654:1:exon
so has part: feature:475053-475275:1:exon
so has part: feature:475479-475548:1:exon
so has part: feature:475882-476053:1:exon
so has part: feature:477142-477750:1:exon

XP_021403179.1
type: Protein
SIO_000068: ncbiprotein

position:471517:1
position: 471517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477750:1
position: 477750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471517-471654:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:475053-475275:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:475479-475548:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:475882-476053:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:477142-477750:1:exon

SUCNR1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SUCNR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 483426..484346
location: region:483426-484346:1
so has part: feature:483426-484346:1:exon
subclass of: SO_0000010

110479917
type: Gene
SIO_000068: ncbigene

position:483426:1
position: 483426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484346:1
position: 484346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483426-484346:1:exon

SUCNR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SUCNR1
product: succinate receptor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021547510.1
SIO_010081: SUCNR1
subclass of: SO_0000673
so part of: SUCNR1
location: 483426..484346
location: region:483426-484346:1
so has part: feature:483426-484346:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:483426-484346:1:exon

SUCNR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SUCNR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: succinate receptor 1
translation: MSRVLEKYYLPTMYSLEFILGAIGNTVVVFGYIFCLKKWKSGNIYLFNLSISDLLLLCTLPILVNSYSNDQWAKESILCHSNRFLLHANLYSSILFLTAISADRYMLMKHPFRDHLLQKRRTAVTVSLAIWIGVILEQLPLLHFLEALTPANTDECLDYASSGDPGKSLAYSMFLTVFGFLIPLLTMCCFYVKMVHFLKSRSEQVRSALTLEKPLTLVILTVVIFSLLFTPYHVMRNVRIASRIPALNVPECAQGIISTVYIITRPFAFLNSAINPVFYFLMGDHFREMLMARTRQLLGRLTTTGK
SIO_010081: SUCNR1
subclass of: SO_0000673
so part of: SUCNR1
location: 483426..484346
location: region:483426-484346:1
so has part: feature:483426-484346:1:exon

XP_021403185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:483426-484346:1:exon

MBNL1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: MBNL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 501114..562353
location: region:501114-562353:1
so has part: feature:501114-562353:1:exon
subclass of: SO_0000010

110479916
type: Gene
SIO_000068: ncbigene

position:501114:1
position: 501114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562353:1
position: 562353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501114-562353:1:exon

MBNL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: MBNL1
product: muscleblind like splicing regulator 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 44 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021547509.1
SIO_010081: MBNL1
subclass of: SO_0000673
so part of: MBNL1
location: join(501114..501180,516573..517469,540301..540471,547548..547805,549511..549664,554993..555028,555717..555811,558723..558797,559603..562353)
location: region:501114-562353:1
so has part: feature:501114-501180:1:exon
so has part: feature:516573-517469:1:exon
so has part: feature:540301-540471:1:exon
so has part: feature:547548-547805:1:exon
so has part: feature:549511-549664:1:exon
so has part: feature:554993-555028:1:exon
so has part: feature:555717-555811:1:exon
so has part: feature:558723-558797:1:exon
so has part: feature:559603-562353:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:501114-501180:1:exon

position:501180:1
position: 501180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:516573-517469:1:exon

position:516573:1
position: 516573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517469:1
position: 517469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:540301-540471:1:exon

position:540301:1
position: 540301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540471:1
position: 540471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:547548-547805:1:exon

position:547548:1
position: 547548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547805:1
position: 547805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:549511-549664:1:exon

position:549511:1
position: 549511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549664:1
position: 549664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:554993-555028:1:exon

position:554993:1
position: 554993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555028:1
position: 555028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:555717-555811:1:exon

position:555717:1
position: 555717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555811:1
position: 555811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:558723-558797:1:exon

position:558723:1
position: 558723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558797:1
position: 558797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:559603-562353:1:exon

position:559603:1
position: 559603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MBNL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: MBNL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscleblind-like protein 1
translation: MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGRCSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVVCREYQRGNCNRGENDCRFAHPADSAMIDTNDNTVTVCMDYIKGRCSREKCKYFHPPAHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQYQQALANMQLQQHTAFLPPGSILCMTPATSVVPMVHGATPATVSAATTSATSVPFAATATANQIPIISAEHLTSHKYVTQM
SIO_010081: MBNL1
subclass of: SO_0000673
so part of: MBNL1
location: join(517296..517469,540301..540471,547548..547805,549511..549664,554993..555028,555717..555811,558723..558779)
location: region:517296-558779:1
so has part: feature:517296-517469:1:exon
so has part: feature:540301-540471:1:exon
so has part: feature:547548-547805:1:exon
so has part: feature:549511-549664:1:exon
so has part: feature:554993-555028:1:exon
so has part: feature:555717-555811:1:exon
so has part: feature:558723-558779:1:exon

XP_021403184.1
type: Protein
SIO_000068: ncbiprotein

position:517296:1
position: 517296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558779:1
position: 558779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517296-517469:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:540301-540471:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:547548-547805:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:549511-549664:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:554993-555028:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:555717-555811:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:558723-558779:1:exon

P2RY1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: P2RY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 588036..591557
location: region:588036-591557:1
so has part: feature:588036-591557:1:exon
subclass of: SO_0000010

110479915
type: Gene
SIO_000068: ncbigene

position:588036:1
position: 588036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591557:1
position: 591557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588036-591557:1:exon

P2RY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: P2RY1
product: purinergic receptor P2Y1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_021547506.1
SIO_010081: P2RY1
subclass of: SO_0000673
so part of: P2RY1
location: join(588036..588066,588450..591557)
location: region:588036-591557:1
so has part: feature:588036-588066:1:exon
so has part: feature:588450-591557:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:588036-588066:1:exon

position:588066:1
position: 588066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:588450-591557:1:exon

position:588450:1
position: 588450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

P2RY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: P2RY1
product: purinergic receptor P2Y1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021547507.1
SIO_010081: P2RY1
subclass of: SO_0000673
so part of: P2RY1
location: join(588043..588062,588450..591557)
location: region:588043-591557:1
so has part: feature:588043-588062:1:exon
so has part: feature:588450-591557:1:exon

position:588043:1
position: 588043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588043-588062:1:exon

position:588062:1
position: 588062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:588450-591557:1:exon

P2RY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: P2RY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2Y purinoceptor 1
translation: MTEVLLSAALNGTEPNLLSSGGWSAGNVTTKCSLTKTGFQFYYLPTVYILVFITGFLGNSVAIWMFVFHMRPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDVMCKLQRFIFHVNLYGSILFLTCISVHRYTGVVHPLKSLGRLKKKNAVYISSLVWVLVVAAISPILFYSGTGIRKNKTTTCYDTTADDYLRSYFIYSMCTTVLMFCIPFIVILGCYGLIVKALIYKDLDNTPLRRKSIYLVIIVLTVFAVSYLPFHVMKTLNLRARVDFQTPDMCAFNDKVYATYQVTRGLASLNSCVDPILYFLAGDTFRRRLSRATRKSSRRSEHNVQSKSEDMTLNILSEYKQNGDTSL
SIO_010081: P2RY1
subclass of: SO_0000673
so part of: P2RY1
location: 588518..589609
location: region:588518-589609:1
so has part: feature:588518-589609:1:exon

XP_021403181.1
type: Protein
SIO_000068: ncbiprotein

position:588518:1
position: 588518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:589609:1
position: 589609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588518-589609:1:exon

P2RY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: P2RY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2Y purinoceptor 1
translation: MTEVLLSAALNGTEPNLLSSGGWSAGNVTTKCSLTKTGFQFYYLPTVYILVFITGFLGNSVAIWMFVFHMRPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDVMCKLQRFIFHVNLYGSILFLTCISVHRYTGVVHPLKSLGRLKKKNAVYISSLVWVLVVAAISPILFYSGTGIRKNKTTTCYDTTADDYLRSYFIYSMCTTVLMFCIPFIVILGCYGLIVKALIYKDLDNTPLRRKSIYLVIIVLTVFAVSYLPFHVMKTLNLRARVDFQTPDMCAFNDKVYATYQVTRGLASLNSCVDPILYFLAGDTFRRRLSRATRKSSRRSEHNVQSKSEDMTLNILSEYKQNGDTSL
SIO_010081: P2RY1
subclass of: SO_0000673
so part of: P2RY1
location: 588518..589609
location: region:588518-589609:1
so has part: feature:588518-589609:1:exon

XP_021403182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:588518-589609:1:exon

RAP2B
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: RAP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 627112..627690
location: region:627112-627690:1
so has part: feature:627112-627690:1:exon
subclass of: SO_0000010

110479914
type: Gene
SIO_000068: ncbigene

position:627112:1
position: 627112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627690:1
position: 627690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:627112-627690:1:exon

RAP2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: RAP2B
product: RAP2B, member of RAS oncogene family
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 34 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021547505.1
SIO_010081: RAP2B
subclass of: SO_0000673
so part of: RAP2B
location: 627112..627690
location: region:627112-627690:1
so has part: feature:627112-627690:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:627112-627690:1:exon

RAP2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: RAP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rap-2b
translation: MREYKVVVLGSGGVGKSALTVQFVTGSFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYERVPMILVGNKVDLEGEREVSFGEGKALAEEWSCPFMETSAKNKASVDELFAEIVRQMNYAAQPNGDEPCCASCAIL
SIO_010081: RAP2B
subclass of: SO_0000673
so part of: RAP2B
location: 627139..627690
location: region:627139-627690:1
so has part: feature:627139-627690:1:exon

XP_021403180.1
type: Protein
SIO_000068: ncbiprotein

position:627139:1
position: 627139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:627139-627690:1:exon

ARHGEF26
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: ARHGEF26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <729331..754124
location: region:729331-754124:1
so has part: feature:729331-754124:1:exon
subclass of: SO_0000010

110476135
type: Gene
SIO_000068: ncbigene

position:729331:1
position: 729331
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:754124:1
position: 754124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:729331-754124:1:exon

ARHGEF26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ARHGEF26
product: Rho guanine nucleotide exchange factor 26
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021540846.2
SIO_010081: ARHGEF26
subclass of: SO_0000673
so part of: ARHGEF26
location: join(<729331..729822,731227..731263,733079..733224,736624..736680,738554..738714,743933..744085,744747..744876,745982..746056,746816..746905,749932..750086,751593..751793,752937..753004,753168..753272,753982..754124)
location: region:729331-754124:1
so has part: feature:729331-729822:1:exon
so has part: feature:731227-731263:1:exon
so has part: feature:733079-733224:1:exon
so has part: feature:736624-736680:1:exon
so has part: feature:738554-738714:1:exon
so has part: feature:743933-744085:1:exon
so has part: feature:744747-744876:1:exon
so has part: feature:745982-746056:1:exon
so has part: feature:746816-746905:1:exon
so has part: feature:749932-750086:1:exon
so has part: feature:751593-751793:1:exon
so has part: feature:752937-753004:1:exon
so has part: feature:753168-753272:1:exon
so has part: feature:753982-754124:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:729331-729822:1:exon

position:729822:1
position: 729822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:731227-731263:1:exon

position:731227:1
position: 731227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731263:1
position: 731263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:733079-733224:1:exon

position:733079:1
position: 733079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:733224:1
position: 733224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:736624-736680:1:exon

position:736624:1
position: 736624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:736680:1
position: 736680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:738554-738714:1:exon

position:738554:1
position: 738554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:738714:1
position: 738714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:743933-744085:1:exon

position:743933:1
position: 743933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744085:1
position: 744085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:744747-744876:1:exon

position:744747:1
position: 744747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744876:1
position: 744876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:745982-746056:1:exon

position:745982:1
position: 745982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746056:1
position: 746056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:746816-746905:1:exon

position:746816:1
position: 746816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746905:1
position: 746905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:749932-750086:1:exon

position:749932:1
position: 749932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:750086:1
position: 750086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:751593-751793:1:exon

position:751593:1
position: 751593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:751793:1
position: 751793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:752937-753004:1:exon

position:752937:1
position: 752937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753004:1
position: 753004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:753168-753272:1:exon

position:753168:1
position: 753168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753272:1
position: 753272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:753982-754124:1:exon

position:753982:1
position: 753982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARHGEF26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ARHGEF26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 26
translation: GPSPRSGRGAGVPEGPGPSPRSGRGAGVPEEPRPCPGRVPAGPGAEPPALPGSRSPAARRAGSQQLIPRSLAESRPAGPERGPRVRSLLETPRPAPGSDPEDEPEGGPGALRRGLRSTSYRRAVVSGVDLDGSADCKKKNRMSQPILKAVVEDKEKFSSLGRIKKMLKGQGTFDGEENAVLYQNYKEKALDIDSDEESEPQEQKLDDKVVFHYKPLRSTWSQLSVVKKNGLSEGISQEERKRQEAIFEVISSEHSYLLSLEILIRMFKNSRELSLTMTKTESHHLFSNITDVYEASKKFFEELEARHQNNIFIDDISDIVARHAGCTFDPYVKYCSNEVYQQRTLQRLLATNPAFKEVLSRIESHEDCRNLPMISFLILPMQRVTRLPLLMDTICQKTPKDSAKYENCKQALKEVSKLVRLCNEGARKMERTEMMYTINSQLEFKIKPFPLVSSSRWLVKRGELTAYVEDTGLFSKRTSKQQLYFFLFNDVLIITKKKSEESYNVTEYSLREQLLVLPCEEEPGSSPARSAAGMLQRSSASHLFRLLLLCNHAGDRGEMLLGAETQSDRARWITALGQDGDGHHTDRTTLAQVEIIRTYTAKQADELSLQVADVVLVYQKVNDGWYEGERLRDGQRGWFPSECAREITCRATLDKNMERMGRLLGLETNV
SIO_010081: ARHGEF26
subclass of: SO_0000673
so part of: ARHGEF26
location: join(<729331..729822,731227..731263,733079..733224,736624..736680,738554..738714,743933..744085,744747..744876,745982..746056,746816..746905,749932..750086,751593..751793,752937..753004,753168..753272,753982..754124)
location: region:729331-754124:1
so has part: feature:729331-729822:1:exon
so has part: feature:731227-731263:1:exon
so has part: feature:733079-733224:1:exon
so has part: feature:736624-736680:1:exon
so has part: feature:738554-738714:1:exon
so has part: feature:743933-744085:1:exon
so has part: feature:744747-744876:1:exon
so has part: feature:745982-746056:1:exon
so has part: feature:746816-746905:1:exon
so has part: feature:749932-750086:1:exon
so has part: feature:751593-751793:1:exon
so has part: feature:752937-753004:1:exon
so has part: feature:753168-753272:1:exon
so has part: feature:753982-754124:1:exon

XP_021396521.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:729331-729822:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:731227-731263:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:733079-733224:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:736624-736680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:738554-738714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:743933-744085:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:744747-744876:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:745982-746056:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:746816-746905:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:749932-750086:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:751593-751793:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:752937-753004:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:753168-753272:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:753982-754124:1:exon

DHX36
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: DHX36
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(757388..772609)
location: region:757388-772609:-1
so has part: feature:757388-772609:-1:exon
subclass of: SO_0000010

110476123
type: Gene
SIO_000068: ncbigene

position:757388:-1
position: 757388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:772609:-1
position: 772609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:757388-772609:-1:exon

DHX36
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: DHX36
product: DEAH-box helicase 36
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 9 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021540829.1
SIO_010081: DHX36
subclass of: SO_0000673
so part of: DHX36
location: complement(join(757388..758423,759053..759205,759770..759890,760270..760360,760446..760545,760644..760727,761375..761461,761752..761925,762478..762576,762928..763045,763529..763672,764159..764223,764329..764384,765216..765303,765604..765706,766185..766325,766773..766854,767414..767580,767710..767784,768652..768731,769457..769627,770351..770389,771035..771236,772146..772267,772350..772609))
location: region:757388-772609:-1
so has part: feature:772350-772609:-1:exon
so has part: feature:772146-772267:-1:exon
so has part: feature:771035-771236:-1:exon
so has part: feature:770351-770389:-1:exon
so has part: feature:769457-769627:-1:exon
so has part: feature:768652-768731:-1:exon
so has part: feature:767710-767784:-1:exon
so has part: feature:767414-767580:-1:exon
so has part: feature:766773-766854:-1:exon
so has part: feature:766185-766325:-1:exon
so has part: feature:765604-765706:-1:exon
so has part: feature:765216-765303:-1:exon
so has part: feature:764329-764384:-1:exon
so has part: feature:764159-764223:-1:exon
so has part: feature:763529-763672:-1:exon
so has part: feature:762928-763045:-1:exon
so has part: feature:762478-762576:-1:exon
so has part: feature:761752-761925:-1:exon
so has part: feature:761375-761461:-1:exon
so has part: feature:760644-760727:-1:exon
so has part: feature:760446-760545:-1:exon
so has part: feature:760270-760360:-1:exon
so has part: feature:759770-759890:-1:exon
so has part: feature:759053-759205:-1:exon
so has part: feature:757388-758423:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:772350-772609:-1:exon

position:772350:-1
position: 772350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:772146-772267:-1:exon

position:772146:-1
position: 772146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:772267:-1
position: 772267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:771035-771236:-1:exon

position:771035:-1
position: 771035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:771236:-1
position: 771236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:770351-770389:-1:exon

position:770351:-1
position: 770351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770389:-1
position: 770389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:769457-769627:-1:exon

position:769457:-1
position: 769457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:769627:-1
position: 769627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:768652-768731:-1:exon

position:768652:-1
position: 768652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:768731:-1
position: 768731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:767710-767784:-1:exon

position:767710:-1
position: 767710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:767784:-1
position: 767784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:767414-767580:-1:exon

position:767414:-1
position: 767414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:767580:-1
position: 767580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:766773-766854:-1:exon

position:766773:-1
position: 766773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:766854:-1
position: 766854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:766185-766325:-1:exon

position:766185:-1
position: 766185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:766325:-1
position: 766325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:765604-765706:-1:exon

position:765604:-1
position: 765604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:765706:-1
position: 765706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:765216-765303:-1:exon

position:765216:-1
position: 765216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:765303:-1
position: 765303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:764329-764384:-1:exon

position:764329:-1
position: 764329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:764384:-1
position: 764384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:764159-764223:-1:exon

position:764159:-1
position: 764159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:764223:-1
position: 764223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:763529-763672:-1:exon

position:763529:-1
position: 763529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763672:-1
position: 763672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:762928-763045:-1:exon

position:762928:-1
position: 762928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763045:-1
position: 763045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:762478-762576:-1:exon

position:762478:-1
position: 762478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:762576:-1
position: 762576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:761752-761925:-1:exon

position:761752:-1
position: 761752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761925:-1
position: 761925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:761375-761461:-1:exon

position:761375:-1
position: 761375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761461:-1
position: 761461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:760644-760727:-1:exon

position:760644:-1
position: 760644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:760727:-1
position: 760727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:760446-760545:-1:exon

position:760446:-1
position: 760446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:760545:-1
position: 760545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:760270-760360:-1:exon

position:760270:-1
position: 760270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:760360:-1
position: 760360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:759770-759890:-1:exon

position:759770:-1
position: 759770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759890:-1
position: 759890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:759053-759205:-1:exon

position:759053:-1
position: 759053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759205:-1
position: 759205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:757388-758423:-1:exon

position:758423:-1
position: 758423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DHX36
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: DHX36
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent DNA/RNA helicase DHX36
translation: MSYEQRRERGRGRGRGRGRGGDGGAASAASSAAGGPGGRERHPGHLKGREIGMWYARRQGQKNRDADRQQRAVVRMDERREEQIVQLLNSVQAKNDKEQEAMSWWSGDEEGPAPEQPAKVKPDAEKAPVRQTPAWKKTSLDLDVEFLCEKTEQDADLDEQLKEDLMKKRSDPRYIEMQRFREKLPSYGMREELVKLINSSRVTVISGETGCGKTTQVTQFILDDHIERGLGSTCRIVCTQPRRISAISVAERVAAERAESCGNGRSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKFSEYFDHCPMIHIPGFTFPVVEYLLEDVIEKLRYTPEKTDRRQHWRKGFMQGHMSRPEKEEKEEIYRQQWPGYLRQLQDRYSASTISALEMMDDDKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHELLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSKLMDPPSRDAVMLAINHLMELNALDRQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELSRNTKSDHLTVVNAFTGWEEARGCGLWNEKDYCWEYFLSSNTMQMLHNMKGQFAEHLLAAGFVNSRNPKDPKSNTNSGNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDGSVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQDTIAVDEWIVFQSPEKIANLVKKLRKELDDLLQEKIEKPHPVDWNDIKSRDTAVLTAIIDLITTQENEGVRNFAPRFQGERYS
SIO_010081: DHX36
subclass of: SO_0000673
so part of: DHX36
location: complement(join(758238..758423,759053..759205,759770..759890,760270..760360,760446..760545,760644..760727,761375..761461,761752..761925,762478..762576,762928..763045,763529..763672,764159..764223,764329..764384,765216..765303,765604..765706,766185..766325,766773..766854,767414..767580,767710..767784,768652..768731,769457..769627,770351..770389,771035..771236,772146..772267,772350..772559))
location: region:758238-772559:-1
so has part: feature:772350-772559:-1:exon
so has part: feature:772146-772267:-1:exon
so has part: feature:771035-771236:-1:exon
so has part: feature:770351-770389:-1:exon
so has part: feature:769457-769627:-1:exon
so has part: feature:768652-768731:-1:exon
so has part: feature:767710-767784:-1:exon
so has part: feature:767414-767580:-1:exon
so has part: feature:766773-766854:-1:exon
so has part: feature:766185-766325:-1:exon
so has part: feature:765604-765706:-1:exon
so has part: feature:765216-765303:-1:exon
so has part: feature:764329-764384:-1:exon
so has part: feature:764159-764223:-1:exon
so has part: feature:763529-763672:-1:exon
so has part: feature:762928-763045:-1:exon
so has part: feature:762478-762576:-1:exon
so has part: feature:761752-761925:-1:exon
so has part: feature:761375-761461:-1:exon
so has part: feature:760644-760727:-1:exon
so has part: feature:760446-760545:-1:exon
so has part: feature:760270-760360:-1:exon
so has part: feature:759770-759890:-1:exon
so has part: feature:759053-759205:-1:exon
so has part: feature:758238-758423:-1:exon

XP_021396504.1
type: Protein
SIO_000068: ncbiprotein

position:758238:-1
position: 758238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:772559:-1
position: 772559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:772350-772559:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:772146-772267:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:771035-771236:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:770351-770389:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:769457-769627:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:768652-768731:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:767710-767784:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:767414-767580:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:766773-766854:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:766185-766325:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:765604-765706:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:765216-765303:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:764329-764384:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:764159-764223:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:763529-763672:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:762928-763045:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:762478-762576:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:761752-761925:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:761375-761461:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:760644-760727:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:760446-760545:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:760270-760360:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:759770-759890:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:759053-759205:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:758238-758423:-1:exon

MME
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: MME
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 822645..846751
location: region:822645-846751:1
so has part: feature:822645-846751:1:exon
subclass of: SO_0000010

110476117
type: Gene
SIO_000068: ncbigene

position:822645:1
position: 822645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:846751:1
position: 846751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:822645-846751:1:exon

MME
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: MME
product: membrane metalloendopeptidase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031505601.1
SIO_010081: MME
subclass of: SO_0000673
so part of: MME
location: join(822645..822771,822980..823149,824393..824428,828030..828191,829098..829178,829858..829953,830054..830172,830878..830943,833475..833609,834937..835038,836553..836689,836785..836880,838085..838211,838798..838896,839392..839472,840092..840195,840370..840428,842271..842390,842884..843017,843955..844020,846076..846171,846567..846751)
location: region:822645-846751:1
so has part: feature:822645-822771:1:exon
so has part: feature:822980-823149:1:exon
so has part: feature:824393-824428:1:exon
so has part: feature:828030-828191:1:exon
so has part: feature:829098-829178:1:exon
so has part: feature:829858-829953:1:exon
so has part: feature:830054-830172:1:exon
so has part: feature:830878-830943:1:exon
so has part: feature:833475-833609:1:exon
so has part: feature:834937-835038:1:exon
so has part: feature:836553-836689:1:exon
so has part: feature:836785-836880:1:exon
so has part: feature:838085-838211:1:exon
so has part: feature:838798-838896:1:exon
so has part: feature:839392-839472:1:exon
so has part: feature:840092-840195:1:exon
so has part: feature:840370-840428:1:exon
so has part: feature:842271-842390:1:exon
so has part: feature:842884-843017:1:exon
so has part: feature:843955-844020:1:exon
so has part: feature:846076-846171:1:exon
so has part: feature:846567-846751:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:822645-822771:1:exon

position:822771:1
position: 822771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:822980-823149:1:exon

position:822980:1
position: 822980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:823149:1
position: 823149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:824393-824428:1:exon

position:824393:1
position: 824393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:824428:1
position: 824428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:828030-828191:1:exon

position:828030:1
position: 828030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:828191:1
position: 828191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:829098-829178:1:exon

position:829098:1
position: 829098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:829178:1
position: 829178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:829858-829953:1:exon

position:829858:1
position: 829858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:829953:1
position: 829953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:830054-830172:1:exon

position:830054:1
position: 830054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:830172:1
position: 830172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:830878-830943:1:exon

position:830878:1
position: 830878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:830943:1
position: 830943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:833475-833609:1:exon

position:833475:1
position: 833475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:833609:1
position: 833609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:834937-835038:1:exon

position:834937:1
position: 834937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:835038:1
position: 835038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:836553-836689:1:exon

position:836553:1
position: 836553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:836689:1
position: 836689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:836785-836880:1:exon

position:836785:1
position: 836785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:836880:1
position: 836880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:838085-838211:1:exon

position:838085:1
position: 838085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:838211:1
position: 838211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:838798-838896:1:exon

position:838798:1
position: 838798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:838896:1
position: 838896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:839392-839472:1:exon

position:839392:1
position: 839392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:839472:1
position: 839472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:840092-840195:1:exon

position:840092:1
position: 840092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:840195:1
position: 840195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:840370-840428:1:exon

position:840370:1
position: 840370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:840428:1
position: 840428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:842271-842390:1:exon

position:842271:1
position: 842271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:842390:1
position: 842390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:842884-843017:1:exon

position:842884:1
position: 842884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:843017:1
position: 843017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:843955-844020:1:exon

position:843955:1
position: 843955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:844020:1
position: 844020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:846076-846171:1:exon

position:846076:1
position: 846076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:846171:1
position: 846171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:846567-846751:1:exon

position:846567:1
position: 846567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MME
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: MME
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neprilysin
translation: MGKSESQMDITEMNTPKPKKKLGWSGLEIGLAVVVVLLAIVAITMIILYATYDDGVCKTPDCIKSAARILENMDPSAQPCQDFYQYACGGWLKRNVIPETSSRYSNFDILRDELEVVLKDVLDTPSTSDIPAVQKAKTLYRSCINETAIDLRGGKPLISLLPNVSEWPVATTNWDASYGTAWTAETAIAQLNSRYGKKVLINFFVGTDDKNSTAHIIHIDQPGLGLPSRDYYECTGAYREACSAYVDFMISVAKLILQERNISVNETAISAQMRRVMELEKEIANATTKSEDRNDPLLLYNKMTLAQLQNNFSLEINNKVFSWSEFINAIMSTVQINVDNTEHVIVYDPDYLLKLRSILVKYSSRDLQNYMAWRFVMDLVNSLSRDYKDTRNAFRKVXXXXXXXXXAWRRCANYVNGNMESAVGRLYVEEAFAGDSKHVVEEMIADIRDVFIKTLDELPWMDAVTKKRAEQKATAIRERIGYPDEIVTDNDKLNSEYQELNYKEEEYFENIIQNLVFTQKKRLKKLREKVDKEEWISGAAVVNAFYSASRNQIVFPAGILQPPFFSASQPKSLNYGGIGMVIGHEITHGFDDNGRNFNENGDLVDWWTEESARNFKELSQCMVYQYGNFSWDLAGGQNLSGINTLGENIADNGGVRQAYKAYENFVRKHGKEKLLPGLDMNHKQLFFLNFAQVWCGTYRPEYAVNSIKTDVHSPGKFRSAEAASPVQSRGVTPLTHGGLWGS
SIO_010081: MME
subclass of: SO_0000673
so part of: MME
location: join(822990..823149,824393..824428,828030..828191,829098..829178,829858..829953,830054..830172,830878..830943,833475..833609,834937..835038,836553..836689,836785..836880,838085..838211,838798..838896,839392..839472,840092..840195,840370..840428,842271..842390,842884..843017,843955..844020,846076..846171,846567..846719)
location: region:822990-846719:1
so has part: feature:822990-823149:1:exon
so has part: feature:824393-824428:1:exon
so has part: feature:828030-828191:1:exon
so has part: feature:829098-829178:1:exon
so has part: feature:829858-829953:1:exon
so has part: feature:830054-830172:1:exon
so has part: feature:830878-830943:1:exon
so has part: feature:833475-833609:1:exon
so has part: feature:834937-835038:1:exon
so has part: feature:836553-836689:1:exon
so has part: feature:836785-836880:1:exon
so has part: feature:838085-838211:1:exon
so has part: feature:838798-838896:1:exon
so has part: feature:839392-839472:1:exon
so has part: feature:840092-840195:1:exon
so has part: feature:840370-840428:1:exon
so has part: feature:842271-842390:1:exon
so has part: feature:842884-843017:1:exon
so has part: feature:843955-844020:1:exon
so has part: feature:846076-846171:1:exon
so has part: feature:846567-846719:1:exon

XP_031361461.1
type: Protein
SIO_000068: ncbiprotein

position:822990:1
position: 822990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:846719:1
position: 846719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:822990-823149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:824393-824428:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:828030-828191:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:829098-829178:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:829858-829953:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:830054-830172:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:830878-830943:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:833475-833609:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:834937-835038:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:836553-836689:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:836785-836880:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:838085-838211:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:838798-838896:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:839392-839472:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:840092-840195:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:840370-840428:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:842271-842390:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:842884-843017:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:843955-844020:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:846076-846171:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:846567-846719:1:exon

STRIT1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: STRIT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(857401..858319)
location: region:857401-858319:-1
so has part: feature:857401-858319:-1:exon
subclass of: SO_0000010

110476113
type: Gene
SIO_000068: ncbigene

position:857401:-1
position: 857401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:858319:-1
position: 858319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:857401-858319:-1:exon

STRIT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: STRIT1
product: small transmembrane regulator of ion transport 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 52% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021540818.1
SIO_010081: STRIT1
subclass of: SO_0000673
so part of: STRIT1
location: complement(join(857401..857521,858312..858319))
location: region:857401-858319:-1
so has part: feature:858312-858319:-1:exon
so has part: feature:857401-857521:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:858312-858319:-1:exon

position:858312:-1
position: 858312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:857401-857521:-1:exon

position:857521:-1
position: 857521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

STRIT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: STRIT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sarcoplasmic/endoplasmic reticulum calcium ATPase regulator DWORF
translation: MYWVLSLFSVPAQAPLSRLLVPVLLALGWILGCALVVYIVFS
SIO_010081: STRIT1
subclass of: SO_0000673
so part of: STRIT1
location: complement(join(857401..857521,858312..858319))
location: region:857401-858319:-1
so has part: feature:858312-858319:-1:exon
so has part: feature:857401-857521:-1:exon

XP_021396493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:858312-858319:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:857401-857521:-1:exon

PLCH1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: PLCH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(878672..924001)
location: region:878672-924001:-1
so has part: feature:878672-924001:-1:exon
subclass of: SO_0000010

110476118
type: Gene
SIO_000068: ncbigene

position:878672:-1
position: 878672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:924001:-1
position: 924001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:878672-924001:-1:exon

PLCH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PLCH1
product: phospholipase C eta 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 69% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031505602.1
SIO_010081: PLCH1
subclass of: SO_0000673
so part of: PLCH1
location: complement(join(878672..879209,879282..879676,879761..881001,881769..882129,882597..882656,883938..884017,884510..884656,885136..885220,885639..885763,886265..886372,886465..886644,887235..887335,888101..888189,891284..891355,892436..892597,893175..893282,894760..894931,895813..895933,896570..896773,897968..898061,899886..900056,901625..901754,902976..903219,903560..903706,923898..924001))
location: region:878672-924001:-1
so has part: feature:923898-924001:-1:exon
so has part: feature:903560-903706:-1:exon
so has part: feature:902976-903219:-1:exon
so has part: feature:901625-901754:-1:exon
so has part: feature:899886-900056:-1:exon
so has part: feature:897968-898061:-1:exon
so has part: feature:896570-896773:-1:exon
so has part: feature:895813-895933:-1:exon
so has part: feature:894760-894931:-1:exon
so has part: feature:893175-893282:-1:exon
so has part: feature:892436-892597:-1:exon
so has part: feature:891284-891355:-1:exon
so has part: feature:888101-888189:-1:exon
so has part: feature:887235-887335:-1:exon
so has part: feature:886465-886644:-1:exon
so has part: feature:886265-886372:-1:exon
so has part: feature:885639-885763:-1:exon
so has part: feature:885136-885220:-1:exon
so has part: feature:884510-884656:-1:exon
so has part: feature:883938-884017:-1:exon
so has part: feature:882597-882656:-1:exon
so has part: feature:881769-882129:-1:exon
so has part: feature:879761-881001:-1:exon
so has part: feature:879282-879676:-1:exon
so has part: feature:878672-879209:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:923898-924001:-1:exon

position:923898:-1
position: 923898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:903560-903706:-1:exon

position:903560:-1
position: 903560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:903706:-1
position: 903706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:902976-903219:-1:exon

position:902976:-1
position: 902976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:903219:-1
position: 903219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:901625-901754:-1:exon

position:901625:-1
position: 901625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901754:-1
position: 901754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:899886-900056:-1:exon

position:899886:-1
position: 899886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900056:-1
position: 900056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:897968-898061:-1:exon

position:897968:-1
position: 897968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:898061:-1
position: 898061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:896570-896773:-1:exon

position:896570:-1
position: 896570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896773:-1
position: 896773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:895813-895933:-1:exon

position:895813:-1
position: 895813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:895933:-1
position: 895933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:894760-894931:-1:exon

position:894760:-1
position: 894760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:894931:-1
position: 894931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:893175-893282:-1:exon

position:893175:-1
position: 893175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893282:-1
position: 893282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:892436-892597:-1:exon

position:892436:-1
position: 892436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892597:-1
position: 892597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:891284-891355:-1:exon

position:891284:-1
position: 891284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891355:-1
position: 891355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:888101-888189:-1:exon

position:888101:-1
position: 888101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888189:-1
position: 888189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:887235-887335:-1:exon

position:887235:-1
position: 887235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887335:-1
position: 887335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:886465-886644:-1:exon

position:886465:-1
position: 886465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886644:-1
position: 886644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:886265-886372:-1:exon

position:886265:-1
position: 886265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886372:-1
position: 886372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:885639-885763:-1:exon

position:885639:-1
position: 885639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885763:-1
position: 885763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:885136-885220:-1:exon

position:885136:-1
position: 885136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885220:-1
position: 885220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:884510-884656:-1:exon

position:884510:-1
position: 884510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:884656:-1
position: 884656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:883938-884017:-1:exon

position:883938:-1
position: 883938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:884017:-1
position: 884017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:882597-882656:-1:exon

position:882597:-1
position: 882597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:882656:-1
position: 882656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:881769-882129:-1:exon

position:881769:-1
position: 881769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:882129:-1
position: 882129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:879761-881001:-1:exon

position:879761:-1
position: 879761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:881001:-1
position: 881001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:879282-879676:-1:exon

position:879282:-1
position: 879282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:879676:-1
position: 879676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:878672-879209:-1:exon

position:879209:-1
position: 879209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLCH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PLCH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1
translation: MSYWSLDKKSCLQYCRHFLADNGAFHVERCMSVMQSGTQMVKLKSGTKGLVRLFYLDEHRSCIRWRPSRKSEKAKIVIDSIYKVSEGRQSEIFHRHAEGSFEPSCCFSIYHGSHLESLDLITSNPEEARTWVTGLKYLLAGISDEDSLAKRQRTHDHWVKQTFEEADKNGDGLLTIEEIHQLMHKLNVSLPRRKVRQMFQEADTDENQGTLNFEEFSVFYKMMSLRRDLYLLLLSYSDKKDHLTAEELAQFLRVEQKMNNVTPEYCLDIIQKFEVSEENKKQNVLGIEGFTRFMRSPACEVCNPLHRQVHQDMQQPLCHYFIASSHNTYLSGDQLLSQSRAEMYARVLQAGCRCVEVDCWDGPDGEPVVHHGYTLTSKILFRDVAETINKYAFIKNEFPVILSIENHCSIQQQKKIAQYLKEIFGDKLDLSSVSTGDPRQLPSPQDLKGKILVKGKKLPCSLGADAEEGEVSEEDSADEIEDDCKLKPCFSNGATQHQVESFIRTKLESLLKESQIRDKEDPDSFTVRALLKATHQSFSVNLKQNLDTKEGGKKSHGRSLMGNFGKHKRAAKAKAHSASDEEDGQQHPLGKEPGQPHSRLARRRKTVKLCRALSDLVVYTNSVAAQDIVDDGSTGNVLSFSETRAHQAVQQKAEQFMLYNQRQLTRVYPSAYRIDSSNFNPVPYWNVGCQLVALNYQSEGRVMQLNEAKFRVNGNCGYVLKPQQMCKGTFNPYSADPLPASPKKQLILKIISGQQLPKPPDSMLGDRGEIIDPFVEVEIIGLPVDCCKDQTRVVDDNGFNPVWEETLTFTIHMPEIALVRFLVWDHDPIGRDFVGQRTVAFSSLVPGYRHVYLEGLTEASIFVHIIINETYGKWSPLILNPSYTIMHFLGATKGKQLMGLRGLFSKAPKAGTAEASGHQVRKRSIGERILRRTASAPAKGRKKSKMGFLEAADIKDSASEPTDLKDKEGVVRRPNRSSQARPVSMPVDRFLLVELPCPAEDTAQEAKGEESTSANSDDNTNEKETSLKELDFPPSEQNSNASNVASQLKKENDQWDSTDDCLVPPPQEQPEHLVFANGVAQANHLVDYQENNLSDGTVPLMQDSDSELPTEKLHHKNCADGKKEDDTKGSKEGKISLMGTSLSQNAEVENHKYDMQKSTAAPLSLSSAVCSEGPDCHSTMALQDSDISHLIDEVSLSTESELDSAVSTLIGQLDGTDDQTLLLPVSSPHGSSSQTPRVGAAAPHVFAADLSSPCRHDFTPTKSNKSSLFSTSDTAMLSSLEDAEYSTYTIIHQASPASECKNHRALVCKKRLNNLESNLPGSWSSSLSLLNANPKRNCATKSGPSWEAPESASSFGSNSLIFEEALGAPGPGEHSDSSSLLEVDGDCQDLLVTAREYRREDLSQLASPVSLRQRREPGHGAGRTAGSCDSAGASWQQPSGKHKAAVRVPQASPACPLLPGALPFPPHPAIQQSSPCKSKSLGDLTSEDISCNFESKYQYISRSFISSGLRDRKAAATRGVRPHSTDALTEQLRRLLALEQEESRELLCPWQQPGQEESLRELLCPRQQPGQEDSLCPRQQPGQEESRELLCPWQQPGQEHSLCPRQPGQEDSLCPRQQADEPCPRALVRKLSSRSQSRVRNIASRARERQEAAGRHRASGGGAAPAVLLRSRAGAPPLAANRHSTGSCIGSYLRCLHGGPAERRGVPEGACAGLGCAELPLPPGGPEQPEVYFLLRL
SIO_010081: PLCH1
subclass of: SO_0000673
so part of: PLCH1
location: complement(join(878672..879209,879282..879676,879761..881001,881769..882129,882597..882656,883938..884017,884510..884656,885136..885220,885639..885763,886265..886372,886465..886644,887235..887335,888101..888189,891284..891355,892436..892597,893175..893282,894760..894931,895813..895933,896570..896773,897968..898061,899886..900056,901625..901754,902976..903219,903560..903706,923898..923976))
location: region:878672-923976:-1
so has part: feature:923898-923976:-1:exon
so has part: feature:903560-903706:-1:exon
so has part: feature:902976-903219:-1:exon
so has part: feature:901625-901754:-1:exon
so has part: feature:899886-900056:-1:exon
so has part: feature:897968-898061:-1:exon
so has part: feature:896570-896773:-1:exon
so has part: feature:895813-895933:-1:exon
so has part: feature:894760-894931:-1:exon
so has part: feature:893175-893282:-1:exon
so has part: feature:892436-892597:-1:exon
so has part: feature:891284-891355:-1:exon
so has part: feature:888101-888189:-1:exon
so has part: feature:887235-887335:-1:exon
so has part: feature:886465-886644:-1:exon
so has part: feature:886265-886372:-1:exon
so has part: feature:885639-885763:-1:exon
so has part: feature:885136-885220:-1:exon
so has part: feature:884510-884656:-1:exon
so has part: feature:883938-884017:-1:exon
so has part: feature:882597-882656:-1:exon
so has part: feature:881769-882129:-1:exon
so has part: feature:879761-881001:-1:exon
so has part: feature:879282-879676:-1:exon
so has part: feature:878672-879209:-1:exon

XP_031361462.1
type: Protein
SIO_000068: ncbiprotein

position:923976:-1
position: 923976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:923898-923976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:903560-903706:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:902976-903219:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:901625-901754:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:899886-900056:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:897968-898061:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:896570-896773:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:895813-895933:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:894760-894931:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:893175-893282:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:892436-892597:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:891284-891355:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:888101-888189:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:887235-887335:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:886465-886644:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:886265-886372:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:885639-885763:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:885136-885220:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:884510-884656:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:883938-884017:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:882597-882656:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:881769-882129:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:879761-881001:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:879282-879676:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:878672-879209:-1:exon

C9H3orf33
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: C9H3orf33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(937873..944382)
location: region:937873-944382:-1
so has part: feature:937873-944382:-1:exon
subclass of: SO_0000010

110476115
type: Gene
SIO_000068: ncbigene

position:937873:-1
position: 937873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944382:-1
position: 944382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:937873-944382:-1:exon

C9H3orf33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: C9H3orf33
product: chromosome 9 C3orf33 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_021540820.1
SIO_010081: C9H3orf33
subclass of: SO_0000673
so part of: C9H3orf33
location: complement(join(937873..939005,939610..939770,941165..941318,943587..943646,944281..944382))
location: region:937873-944382:-1
so has part: feature:944281-944382:-1:exon
so has part: feature:943587-943646:-1:exon
so has part: feature:941165-941318:-1:exon
so has part: feature:939610-939770:-1:exon
so has part: feature:937873-939005:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:944281-944382:-1:exon

position:944281:-1
position: 944281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:943587-943646:-1:exon

position:943587:-1
position: 943587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:943646:-1
position: 943646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:941165-941318:-1:exon

position:941165:-1
position: 941165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:941318:-1
position: 941318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:939610-939770:-1:exon

position:939610:-1
position: 939610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:939770:-1
position: 939770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:937873-939005:-1:exon

position:939005:-1
position: 939005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C9H3orf33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: C9H3orf33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C3orf33 homolog
translation: MPERGGGGGGGSERAALALARLSEWADAHLGLLRGLIAGAAVAGALLLARSLRLTTKFISPLDIPVEFVQKNVKLRGKLHHITEKGLEVEHIPISIPFISAIQRKWQPEGLLLIRLAGVELAAGGTAWLQRELLPKQPLWFQLLGRDSSALECLVLVHKGGFFSTCLNEELLSQGLARAARIEGLPHHSRLYWKLHKRLLQAELKAVKKNKGIWKEQSYSERVQEHINSNKFLQRLKQFVSWVRSSVGR
SIO_010081: C9H3orf33
subclass of: SO_0000673
so part of: C9H3orf33
location: complement(join(938733..939005,939610..939770,941165..941318,943587..943646,944281..944382))
location: region:938733-944382:-1
so has part: feature:944281-944382:-1:exon
so has part: feature:943587-943646:-1:exon
so has part: feature:941165-941318:-1:exon
so has part: feature:939610-939770:-1:exon
so has part: feature:938733-939005:-1:exon

XP_021396495.1
type: Protein
SIO_000068: ncbiprotein

position:938733:-1
position: 938733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:944281-944382:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:943587-943646:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:941165-941318:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:939610-939770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:938733-939005:-1:exon

SLC33A1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SLC33A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(946185..956651)
location: region:946185-956651:-1
so has part: feature:946185-956651:-1:exon
subclass of: SO_0000010

110476124
type: Gene
SIO_000068: ncbigene

position:946185:-1
position: 946185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:956651:-1
position: 956651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:946185-956651:-1:exon

SLC33A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SLC33A1
product: solute carrier family 33 member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_021540830.2
SIO_010081: SLC33A1
subclass of: SO_0000673
so part of: SLC33A1
location: complement(join(946185..947866,949470..949685,950403..950520,950934..951118,951744..951934,955924..956651))
location: region:946185-956651:-1
so has part: feature:955924-956651:-1:exon
so has part: feature:951744-951934:-1:exon
so has part: feature:950934-951118:-1:exon
so has part: feature:950403-950520:-1:exon
so has part: feature:949470-949685:-1:exon
so has part: feature:946185-947866:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:955924-956651:-1:exon

position:955924:-1
position: 955924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:951744-951934:-1:exon

position:951744:-1
position: 951744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:951934:-1
position: 951934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:950934-951118:-1:exon

position:950934:-1
position: 950934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:951118:-1
position: 951118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:950403-950520:-1:exon

position:950403:-1
position: 950403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:950520:-1
position: 950520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:949470-949685:-1:exon

position:949470:-1
position: 949470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:949685:-1
position: 949685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:946185-947866:-1:exon

position:947866:-1
position: 947866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC33A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SLC33A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acetyl-coenzyme A transporter 1
translation: MAPAIAAEQGGRQRRAATRQHSLELTDEPPRHGLPGDTEALLPARARGYRAELGSILLLLVLYVLQGIPLGLAGSVPLILQSKSASYTDQAFFSFVFWPFSLKLLWAPLVDAVYLRGFGRRKSWLVPTQYVLGLFMIYMSTQVDALLGDGRGRGPDVAALTVTFFLFEFLAATQDIAVDGWALTMLSRENVGYASTCNSVGQTAGYFLGNVLFLALESASFCNKYLRSEPQPRGIVTLADFLFFWGAVFLVTTTLVAFLKKENQELIPAKEETKGITDTYRLLFSIVKMPAVLTFCLLILTAKVGFSAADAVTGLKLVEEGVPKEHLALLAVPMVPLQIILPLVISKYTAGPQPLNTFYKAMPYRLLLGLEFAFLVWWAPKVKHEGGFPVYYYAVMVLSYALHQITLYSMYVAIMAFNAKVSDPLIGGTYMTLLNTVSNLGGNWPSTVALWLVDPLTVKECAGAQGHTCATAAATELCTAAGGSCITTLDGYYVESVICVILGFAWWFFLGPKFKKLQDEGQSSWKCRRSN
SIO_010081: SLC33A1
subclass of: SO_0000673
so part of: SLC33A1
location: complement(join(947699..947866,949470..949685,950403..950520,950934..951118,951744..951934,955924..956641))
location: region:947699-956641:-1
so has part: feature:955924-956641:-1:exon
so has part: feature:951744-951934:-1:exon
so has part: feature:950934-951118:-1:exon
so has part: feature:950403-950520:-1:exon
so has part: feature:949470-949685:-1:exon
so has part: feature:947699-947866:-1:exon

XP_021396505.1
type: Protein
SIO_000068: ncbiprotein

position:947699:-1
position: 947699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:956641:-1
position: 956641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:955924-956641:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:951744-951934:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:950934-951118:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:950403-950520:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:949470-949685:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:947699-947866:-1:exon

LOC110476119
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110476119
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(957414..957947)
location: region:957414-957947:-1
so has part: feature:957414-957947:-1:exon
subclass of: SO_0000011

110476119
type: Gene
SIO_000068: ncbigene

position:957414:-1
position: 957414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:957947:-1
position: 957947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:957414-957947:-1:exon

LOC110476119
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110476119
product: uncharacterized LOC110476119
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_002466369.2
SIO_010081: LOC110476119
subclass of: SO_0000673
so part of: LOC110476119
location: complement(join(957414..957727,957869..957947))
location: region:957414-957947:-1
so has part: feature:957869-957947:-1:exon
so has part: feature:957414-957727:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:957869-957947:-1:exon

position:957869:-1
position: 957869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:957414-957727:-1:exon

position:957727:-1
position: 957727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GMPS
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: GMPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 957979..984940
location: region:957979-984940:1
so has part: feature:957979-984940:1:exon
subclass of: SO_0000010

110476125
type: Gene
SIO_000068: ncbigene

position:957979:1
position: 957979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:984940:1
position: 984940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:957979-984940:1:exon

GMPS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: GMPS
product: guanine monophosphate synthase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021540831.1
SIO_010081: GMPS
subclass of: SO_0000673
so part of: GMPS
location: join(957979..958103,963105..963286,966870..966984,968180..968277,969233..969336,969959..970152,971314..971479,973035..973186,973523..973696,974817..974922,975442..975557,977129..977254,978646..978761,980448..980578,982472..982644,984411..984940)
location: region:957979-984940:1
so has part: feature:957979-958103:1:exon
so has part: feature:963105-963286:1:exon
so has part: feature:966870-966984:1:exon
so has part: feature:968180-968277:1:exon
so has part: feature:969233-969336:1:exon
so has part: feature:969959-970152:1:exon
so has part: feature:971314-971479:1:exon
so has part: feature:973035-973186:1:exon
so has part: feature:973523-973696:1:exon
so has part: feature:974817-974922:1:exon
so has part: feature:975442-975557:1:exon
so has part: feature:977129-977254:1:exon
so has part: feature:978646-978761:1:exon
so has part: feature:980448-980578:1:exon
so has part: feature:982472-982644:1:exon
so has part: feature:984411-984940:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:957979-958103:1:exon

position:958103:1
position: 958103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:963105-963286:1:exon

position:963105:1
position: 963105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963286:1
position: 963286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:966870-966984:1:exon

position:966870:1
position: 966870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:966984:1
position: 966984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:968180-968277:1:exon

position:968180:1
position: 968180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:968277:1
position: 968277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:969233-969336:1:exon

position:969233:1
position: 969233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:969336:1
position: 969336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:969959-970152:1:exon

position:969959:1
position: 969959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:970152:1
position: 970152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:971314-971479:1:exon

position:971314:1
position: 971314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:971479:1
position: 971479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:973035-973186:1:exon

position:973035:1
position: 973035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:973186:1
position: 973186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:973523-973696:1:exon

position:973523:1
position: 973523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:973696:1
position: 973696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:974817-974922:1:exon

position:974817:1
position: 974817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:974922:1
position: 974922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:975442-975557:1:exon

position:975442:1
position: 975442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:975557:1
position: 975557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:977129-977254:1:exon

position:977129:1
position: 977129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:977254:1
position: 977254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:978646-978761:1:exon

position:978646:1
position: 978646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:978761:1
position: 978761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:980448-980578:1:exon

position:980448:1
position: 980448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:980578:1
position: 980578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:982472-982644:1:exon

position:982472:1
position: 982472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:982644:1
position: 982644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:984411-984940:1:exon

position:984411:1
position: 984411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GMPS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: GMPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GMP synthase [glutamine-hydrolyzing]
translation: MALCNGDTKPENAGAELKDGQHHYEGAVVILDAGAQYGKVIDRRVRELFVQSEIFPLETPAFAIREQGFRAIIISGGPNSVYAEDAPWFDPAIFTIGKPVLGICYGMQMMNKVFGGTVHKKSVREDGVFSITLDNTCSLFRGLQKEELVLLTHGDSVDKVADGFKVVAQSGNIIAGIANESKKLYGAQFHPEVSLTVNGKMILKNFLYDIAGCSGTFTVENRELQCIQDIKDRVGSSKVLVLLSGGVDSTVCTALLNRALSREQVIAVHIDNGFMRKRESQAVEEALRKLGIHVKVVNAAHSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNLKPEEVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKDEVRVLGRELGLPEELVSRHPFPGPGLAIRVICAEEPYVCKDFPETNNILKIVADFSASVKKPHTLLQRVKACTSEEDQEKLMQITSLHSLNAFLLPIKTVGVQGDCRSYSYVCGISSKDAPHWESLMFLARLIPRMCHNINRVVYVFGPPVKEPPTDVTPTFLTTGVLSTLRQADFEAHNILRESGYAGKISQMPIILTPLHFDRDPLQKQPSCQRSVVIRPFITSDFMTGVAATPGGELPEEVVLKMVAEIKKIPGISRVMYDLTSKPPGTTEWE
SIO_010081: GMPS
subclass of: SO_0000673
so part of: GMPS
location: join(958077..958103,963105..963286,966870..966984,968180..968277,969233..969336,969959..970152,971314..971479,973035..973186,973523..973696,974817..974922,975442..975557,977129..977254,978646..978761,980448..980578,982472..982644,984411..984512)
location: region:958077-984512:1
so has part: feature:958077-958103:1:exon
so has part: feature:963105-963286:1:exon
so has part: feature:966870-966984:1:exon
so has part: feature:968180-968277:1:exon
so has part: feature:969233-969336:1:exon
so has part: feature:969959-970152:1:exon
so has part: feature:971314-971479:1:exon
so has part: feature:973035-973186:1:exon
so has part: feature:973523-973696:1:exon
so has part: feature:974817-974922:1:exon
so has part: feature:975442-975557:1:exon
so has part: feature:977129-977254:1:exon
so has part: feature:978646-978761:1:exon
so has part: feature:980448-980578:1:exon
so has part: feature:982472-982644:1:exon
so has part: feature:984411-984512:1:exon

XP_021396506.1
type: Protein
SIO_000068: ncbiprotein

position:958077:1
position: 958077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:984512:1
position: 984512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:958077-958103:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:963105-963286:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:966870-966984:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:968180-968277:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:969233-969336:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:969959-970152:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:971314-971479:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:973035-973186:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:973523-973696:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:974817-974922:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:975442-975557:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:977129-977254:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:978646-978761:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:980448-980578:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:982472-982644:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:984411-984512:1:exon

KCNAB1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: KCNAB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1009150..1053647
location: region:1009150-1053647:1
so has part: feature:1009150-1053647:1:exon
subclass of: SO_0000010

110476126
type: Gene
SIO_000068: ncbigene

position:1009150:1
position: 1009150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1053647:1
position: 1053647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1009150-1053647:1:exon

KCNAB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: KCNAB1
product: potassium voltage-gated channel subfamily A member regulatory beta subunit 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 11 ESTs, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021540832.2
SIO_010081: KCNAB1
subclass of: SO_0000673
so part of: KCNAB1
location: join(1009150..1009441,1031078..1031121,1038012..1038049,1039900..1039979,1040862..1040906,1042105..1042149,1042711..1042754,1044568..1044654,1048097..1048182,1048920..1049040,1049664..1049758,1050632..1050752,1051580..1051668,1052259..1053647)
location: region:1009150-1053647:1
so has part: feature:1009150-1009441:1:exon
so has part: feature:1031078-1031121:1:exon
so has part: feature:1038012-1038049:1:exon
so has part: feature:1039900-1039979:1:exon
so has part: feature:1040862-1040906:1:exon
so has part: feature:1042105-1042149:1:exon
so has part: feature:1042711-1042754:1:exon
so has part: feature:1044568-1044654:1:exon
so has part: feature:1048097-1048182:1:exon
so has part: feature:1048920-1049040:1:exon
so has part: feature:1049664-1049758:1:exon
so has part: feature:1050632-1050752:1:exon
so has part: feature:1051580-1051668:1:exon
so has part: feature:1052259-1053647:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1009150-1009441:1:exon

position:1009441:1
position: 1009441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1031078-1031121:1:exon

position:1031078:1
position: 1031078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1031121:1
position: 1031121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1038012-1038049:1:exon

position:1038012:1
position: 1038012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038049:1
position: 1038049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1039900-1039979:1:exon

position:1039900:1
position: 1039900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1039979:1
position: 1039979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1040862-1040906:1:exon

position:1040862:1
position: 1040862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040906:1
position: 1040906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1042105-1042149:1:exon

position:1042105:1
position: 1042105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1042149:1
position: 1042149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1042711-1042754:1:exon

position:1042711:1
position: 1042711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1042754:1
position: 1042754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1044568-1044654:1:exon

position:1044568:1
position: 1044568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1044654:1
position: 1044654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1048097-1048182:1:exon

position:1048097:1
position: 1048097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1048182:1
position: 1048182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1048920-1049040:1:exon

position:1048920:1
position: 1048920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1049040:1
position: 1049040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1049664-1049758:1:exon

position:1049664:1
position: 1049664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1049758:1
position: 1049758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1050632-1050752:1:exon

position:1050632:1
position: 1050632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1050752:1
position: 1050752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1051580-1051668:1:exon

position:1051580:1
position: 1051580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1051668:1
position: 1051668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1052259-1053647:1:exon

position:1052259:1
position: 1052259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCNAB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: KCNAB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-gated potassium channel subunit beta-1 isoform X1
translation: MQVSIACTDHNLKRNGEDRLISKQNTTTPNVVNAARAKFRTVAIIARSLGTFTPQHHISLKESTAKQTGMKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAEQLMTIAYESGVNLFDTAEVYAAGKAEVILGNILKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKASLQRLQLEYVDVVFANRPDNNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGNGVPESSRASLKCYQWLKEKIISEEGRKQQGKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSSPEQLIENLGAIQVLPKMTSHIVNEIDNILGNKPYSKKDYRS
SIO_010081: KCNAB1
subclass of: SO_0000673
so part of: KCNAB1
location: join(1009224..1009441,1031078..1031121,1038012..1038049,1039900..1039979,1040862..1040906,1042105..1042149,1042711..1042754,1044568..1044654,1048097..1048182,1048920..1049040,1049664..1049758,1050632..1050752,1051580..1051668,1052259..1052348)
location: region:1009224-1052348:1
so has part: feature:1009224-1009441:1:exon
so has part: feature:1031078-1031121:1:exon
so has part: feature:1038012-1038049:1:exon
so has part: feature:1039900-1039979:1:exon
so has part: feature:1040862-1040906:1:exon
so has part: feature:1042105-1042149:1:exon
so has part: feature:1042711-1042754:1:exon
so has part: feature:1044568-1044654:1:exon
so has part: feature:1048097-1048182:1:exon
so has part: feature:1048920-1049040:1:exon
so has part: feature:1049664-1049758:1:exon
so has part: feature:1050632-1050752:1:exon
so has part: feature:1051580-1051668:1:exon
so has part: feature:1052259-1052348:1:exon

XP_021396507.1
type: Protein
SIO_000068: ncbiprotein

position:1009224:1
position: 1009224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1052348:1
position: 1052348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1009224-1009441:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1031078-1031121:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1038012-1038049:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1039900-1039979:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1040862-1040906:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1042105-1042149:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1042711-1042754:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1044568-1044654:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1048097-1048182:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1048920-1049040:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1049664-1049758:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1050632-1050752:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1051580-1051668:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1052259-1052348:1:exon

KCNAB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: KCNAB1
product: potassium voltage-gated channel subfamily A member regulatory beta subunit 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031505603.1
SIO_010081: KCNAB1
subclass of: SO_0000673
so part of: KCNAB1
location: join(1009713..1009873,1031078..1031121,1038012..1038049,1039900..1039979,1040862..1040906,1042105..1042149,1042711..1042754,1044568..1044654,1048097..1048182,1048920..1049040,1049664..1049758,1050632..1050752,1051580..1051668,1052259..1053647)
location: region:1009713-1053647:1
so has part: feature:1009713-1009873:1:exon
so has part: feature:1031078-1031121:1:exon
so has part: feature:1038012-1038049:1:exon
so has part: feature:1039900-1039979:1:exon
so has part: feature:1040862-1040906:1:exon
so has part: feature:1042105-1042149:1:exon
so has part: feature:1042711-1042754:1:exon
so has part: feature:1044568-1044654:1:exon
so has part: feature:1048097-1048182:1:exon
so has part: feature:1048920-1049040:1:exon
so has part: feature:1049664-1049758:1:exon
so has part: feature:1050632-1050752:1:exon
so has part: feature:1051580-1051668:1:exon
so has part: feature:1052259-1053647:1:exon

position:1009713:1
position: 1009713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1009713-1009873:1:exon

position:1009873:1
position: 1009873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1031078-1031121:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1038012-1038049:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1039900-1039979:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1040862-1040906:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1042105-1042149:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1042711-1042754:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1044568-1044654:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1048097-1048182:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1048920-1049040:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1049664-1049758:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1050632-1050752:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1051580-1051668:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1052259-1053647:1:exon

KCNAB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: KCNAB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-gated potassium channel subunit beta-1 isoform X2
translation: MSRGIDQPGVLGAGQGKLLCSVLEQRRVPWASAQRGGGPRILTWSSRARNLGKSGLRVSCLGLGTWVTFGGQISDEVAEQLMTIAYESGVNLFDTAEVYAAGKAEVILGNILKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKASLQRLQLEYVDVVFANRPDNNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGNGVPESSRASLKCYQWLKEKIISEEGRKQQGKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSSPEQLIENLGAIQVLPKMTSHIVNEIDNILGNKPYSKKDYRS
SIO_010081: KCNAB1
subclass of: SO_0000673
so part of: KCNAB1
location: join(1009728..1009873,1031078..1031121,1038012..1038049,1039900..1039979,1040862..1040906,1042105..1042149,1042711..1042754,1044568..1044654,1048097..1048182,1048920..1049040,1049664..1049758,1050632..1050752,1051580..1051668,1052259..1052348)
location: region:1009728-1052348:1
so has part: feature:1009728-1009873:1:exon
so has part: feature:1031078-1031121:1:exon
so has part: feature:1038012-1038049:1:exon
so has part: feature:1039900-1039979:1:exon
so has part: feature:1040862-1040906:1:exon
so has part: feature:1042105-1042149:1:exon
so has part: feature:1042711-1042754:1:exon
so has part: feature:1044568-1044654:1:exon
so has part: feature:1048097-1048182:1:exon
so has part: feature:1048920-1049040:1:exon
so has part: feature:1049664-1049758:1:exon
so has part: feature:1050632-1050752:1:exon
so has part: feature:1051580-1051668:1:exon
so has part: feature:1052259-1052348:1:exon

XP_031361463.1
type: Protein
SIO_000068: ncbiprotein

position:1009728:1
position: 1009728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1009728-1009873:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1031078-1031121:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1038012-1038049:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1039900-1039979:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1040862-1040906:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1042105-1042149:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1042711-1042754:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1044568-1044654:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1048097-1048182:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1048920-1049040:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1049664-1049758:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1050632-1050752:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1051580-1051668:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1052259-1052348:1:exon

SSR3
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SSR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1055930..1059517)
location: region:1055930-1059517:-1
so has part: feature:1055930-1059517:-1:exon
subclass of: SO_0000010

110476128
type: Gene
SIO_000068: ncbigene

position:1055930:-1
position: 1055930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1059517:-1
position: 1059517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1055930-1059517:-1:exon

SSR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SSR3
product: signal sequence receptor subunit 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 mRNAs, 30 ESTs, 14 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_021540833.1
SIO_010081: SSR3
subclass of: SO_0000673
so part of: SSR3
location: complement(join(1055930..1056324,1056960..1057091,1057625..1057723,1058163..1058289,1059287..1059517))
location: region:1055930-1059517:-1
so has part: feature:1059287-1059517:-1:exon
so has part: feature:1058163-1058289:-1:exon
so has part: feature:1057625-1057723:-1:exon
so has part: feature:1056960-1057091:-1:exon
so has part: feature:1055930-1056324:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1059287-1059517:-1:exon

position:1059287:-1
position: 1059287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1058163-1058289:-1:exon

position:1058163:-1
position: 1058163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1058289:-1
position: 1058289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1057625-1057723:-1:exon

position:1057625:-1
position: 1057625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1057723:-1
position: 1057723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1056960-1057091:-1:exon

position:1056960:-1
position: 1056960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1057091:-1
position: 1057091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1055930-1056324:-1:exon

position:1056324:-1
position: 1056324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SSR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SSR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translocon-associated protein subunit gamma
translation: MAPKGGPGRQQSEEDLLLQDFSRNLSAKSSALFFGNAFIVSAIPIWLYWRIWHMDLVQSAVLYSVMTLISTYLVAFAYKNVKFVLKHKVAQKREDAVSKEVTRKLSEADNRKMSRKEKDERILWKKNEVADYEATTFSIFYNNTLFLVLVIIASFFVLKNFNPTVNYILSISASSGLIALLSTGSK
SIO_010081: SSR3
subclass of: SO_0000673
so part of: SSR3
location: complement(join(1056258..1056324,1056960..1057091,1057625..1057723,1058163..1058289,1059287..1059422))
location: region:1056258-1059422:-1
so has part: feature:1059287-1059422:-1:exon
so has part: feature:1058163-1058289:-1:exon
so has part: feature:1057625-1057723:-1:exon
so has part: feature:1056960-1057091:-1:exon
so has part: feature:1056258-1056324:-1:exon

XP_021396508.1
type: Protein
SIO_000068: ncbiprotein

position:1056258:-1
position: 1056258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1059422:-1
position: 1059422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1059287-1059422:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1058163-1058289:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1057625-1057723:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1056960-1057091:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1056258-1056324:-1:exon

LOC116183941
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116183941
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1061531..1066497
location: region:1061531-1066497:1
so has part: feature:1061531-1066497:1:exon
subclass of: SO_0000011

116183941
type: Gene
SIO_000068: ncbigene

position:1061531:1
position: 1061531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1066497:1
position: 1066497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1061531-1066497:1:exon

LOC116183941
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC116183941
product: uncharacterized LOC116183941
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004148652.1
SIO_010081: LOC116183941
subclass of: SO_0000673
so part of: LOC116183941
location: join(1061531..1061673,1064251..1066497)
location: region:1061531-1066497:1
so has part: feature:1061531-1061673:1:exon
so has part: feature:1064251-1066497:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1061531-1061673:1:exon

position:1061673:1
position: 1061673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1064251-1066497:1:exon

position:1064251:1
position: 1064251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TIPARP
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TIPARP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1070063..1085761
location: region:1070063-1085761:1
so has part: feature:1070063-1085761:1:exon
subclass of: SO_0000010

110476129
type: Gene
SIO_000068: ncbigene

position:1070063:1
position: 1070063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1085761:1
position: 1085761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1070063-1085761:1:exon

TIPARP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TIPARP
product: TCDD inducible poly(ADP-ribose) polymerase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021540834.2
SIO_010081: TIPARP
subclass of: SO_0000673
so part of: TIPARP
location: join(1070063..1070265,1072079..1073076,1080994..1081162,1082056..1082237,1084628..1084903,1085081..1085761)
location: region:1070063-1085761:1
so has part: feature:1070063-1070265:1:exon
so has part: feature:1072079-1073076:1:exon
so has part: feature:1080994-1081162:1:exon
so has part: feature:1082056-1082237:1:exon
so has part: feature:1084628-1084903:1:exon
so has part: feature:1085081-1085761:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1070063-1070265:1:exon

position:1070265:1
position: 1070265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1072079-1073076:1:exon

position:1072079:1
position: 1072079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1073076:1
position: 1073076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1080994-1081162:1:exon

position:1080994:1
position: 1080994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1081162:1
position: 1081162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1082056-1082237:1:exon

position:1082056:1
position: 1082056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1082237:1
position: 1082237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1084628-1084903:1:exon

position:1084628:1
position: 1084628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1084903:1
position: 1084903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1085081-1085761:1:exon

position:1085081:1
position: 1085081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TIPARP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TIPARP
product: TCDD inducible poly(ADP-ribose) polymerase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021540835.2
SIO_010081: TIPARP
subclass of: SO_0000673
so part of: TIPARP
location: join(1070986..1071111,1072079..1073076,1080994..1081162,1082056..1082237,1084628..1084903,1085081..1085761)
location: region:1070986-1085761:1
so has part: feature:1070986-1071111:1:exon
so has part: feature:1072079-1073076:1:exon
so has part: feature:1080994-1081162:1:exon
so has part: feature:1082056-1082237:1:exon
so has part: feature:1084628-1084903:1:exon
so has part: feature:1085081-1085761:1:exon

position:1070986:1
position: 1070986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1070986-1071111:1:exon

position:1071111:1
position: 1071111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1072079-1073076:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1080994-1081162:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1082056-1082237:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1084628-1084903:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1085081-1085761:1:exon

TIPARP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TIPARP
product: TCDD inducible poly(ADP-ribose) polymerase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021540836.2
SIO_010081: TIPARP
subclass of: SO_0000673
so part of: TIPARP
location: join(1071683..1071894,1072079..1073076,1080994..1081162,1082056..1082237,1084628..1084903,1085081..1085761)
location: region:1071683-1085761:1
so has part: feature:1071683-1071894:1:exon
so has part: feature:1072079-1073076:1:exon
so has part: feature:1080994-1081162:1:exon
so has part: feature:1082056-1082237:1:exon
so has part: feature:1084628-1084903:1:exon
so has part: feature:1085081-1085761:1:exon

position:1071683:1
position: 1071683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1071683-1071894:1:exon

position:1071894:1
position: 1071894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1072079-1073076:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1080994-1081162:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1082056-1082237:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1084628-1084903:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1085081-1085761:1:exon

TIPARP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TIPARP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein mono-ADP-ribosyltransferase TIPARP
translation: MDSEPQPACVVPQAPCPAMKCSPSQDFPPQVRLAEKIPPVKPCFKKKQQGQKRLDTQTLRALRPIFTSLLGAGALDRVFVPRGQRGGHGDLCEPAVKKALDLGTSCPQTENNVTVLMPTAPDVQGQLPGARPSPGHPEQDVQPGEQGFSPETPGTAADNGNESFQDHPLHPSAGDGAACPLFPDKVLESHTSGLLQENSCPVQYNLTPGNKFSAGIFQDKSEEASLDLVFELLNQLQYHTHQEDGIEICVDFLQGTCVYGSDCPKHHTVLPYHWQVRRTATQRWQSVTNDSQEHLERLYCNPDNDKIKVKYRGQECWVDLNLMKLYESAEFDQMRRLSTASCPGSSSSCYTVWKYFCRDHFGWREYSEPVVRLIEEASCRGLREVRFITWHNQYILNIKDGFQQNSCFRREIKRRPLLRSCLLLMPFLQTLGGSSAVPSPCSEPAAAHDLSPAAVTCPSFYPETWIGMDPAQDFIQVPVLKEDKSYRTIYNLFHKTVPETKYKILKILRVQNQFLWEKYKRKKEYMSKKMCGLDRILNERHLFHGTSQDVVDGICKHNFDPRVCGKHATMFGQGSYFARKASYSHNFSKRSPKGVHFMFLAKVLTGRYTVGNHTMRRPPPVEPGSVTSDLYDSCVDNYFEPQIFVIFNDDQSYPYFIIQYEEVSSTVSI
SIO_010081: TIPARP
subclass of: SO_0000673
so part of: TIPARP
location: join(1072142..1073076,1080994..1081162,1082056..1082237,1084628..1084903,1085081..1085528)
location: region:1072142-1085528:1
so has part: feature:1072142-1073076:1:exon
so has part: feature:1080994-1081162:1:exon
so has part: feature:1082056-1082237:1:exon
so has part: feature:1084628-1084903:1:exon
so has part: feature:1085081-1085528:1:exon

XP_021396509.1
type: Protein
SIO_000068: ncbiprotein

position:1072142:1
position: 1072142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1085528:1
position: 1085528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1072142-1073076:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1080994-1081162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1082056-1082237:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1084628-1084903:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1085081-1085528:1:exon

TIPARP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TIPARP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein mono-ADP-ribosyltransferase TIPARP
translation: MDSEPQPACVVPQAPCPAMKCSPSQDFPPQVRLAEKIPPVKPCFKKKQQGQKRLDTQTLRALRPIFTSLLGAGALDRVFVPRGQRGGHGDLCEPAVKKALDLGTSCPQTENNVTVLMPTAPDVQGQLPGARPSPGHPEQDVQPGEQGFSPETPGTAADNGNESFQDHPLHPSAGDGAACPLFPDKVLESHTSGLLQENSCPVQYNLTPGNKFSAGIFQDKSEEASLDLVFELLNQLQYHTHQEDGIEICVDFLQGTCVYGSDCPKHHTVLPYHWQVRRTATQRWQSVTNDSQEHLERLYCNPDNDKIKVKYRGQECWVDLNLMKLYESAEFDQMRRLSTASCPGSSSSCYTVWKYFCRDHFGWREYSEPVVRLIEEASCRGLREVRFITWHNQYILNIKDGFQQNSCFRREIKRRPLLRSCLLLMPFLQTLGGSSAVPSPCSEPAAAHDLSPAAVTCPSFYPETWIGMDPAQDFIQVPVLKEDKSYRTIYNLFHKTVPETKYKILKILRVQNQFLWEKYKRKKEYMSKKMCGLDRILNERHLFHGTSQDVVDGICKHNFDPRVCGKHATMFGQGSYFARKASYSHNFSKRSPKGVHFMFLAKVLTGRYTVGNHTMRRPPPVEPGSVTSDLYDSCVDNYFEPQIFVIFNDDQSYPYFIIQYEEVSSTVSI
SIO_010081: TIPARP
subclass of: SO_0000673
so part of: TIPARP
location: join(1072142..1073076,1080994..1081162,1082056..1082237,1084628..1084903,1085081..1085528)
location: region:1072142-1085528:1
so has part: feature:1072142-1073076:1:exon
so has part: feature:1080994-1081162:1:exon
so has part: feature:1082056-1082237:1:exon
so has part: feature:1084628-1084903:1:exon
so has part: feature:1085081-1085528:1:exon

XP_021396510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1072142-1073076:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1080994-1081162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1082056-1082237:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1084628-1084903:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1085081-1085528:1:exon

TIPARP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TIPARP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein mono-ADP-ribosyltransferase TIPARP
translation: MDSEPQPACVVPQAPCPAMKCSPSQDFPPQVRLAEKIPPVKPCFKKKQQGQKRLDTQTLRALRPIFTSLLGAGALDRVFVPRGQRGGHGDLCEPAVKKALDLGTSCPQTENNVTVLMPTAPDVQGQLPGARPSPGHPEQDVQPGEQGFSPETPGTAADNGNESFQDHPLHPSAGDGAACPLFPDKVLESHTSGLLQENSCPVQYNLTPGNKFSAGIFQDKSEEASLDLVFELLNQLQYHTHQEDGIEICVDFLQGTCVYGSDCPKHHTVLPYHWQVRRTATQRWQSVTNDSQEHLERLYCNPDNDKIKVKYRGQECWVDLNLMKLYESAEFDQMRRLSTASCPGSSSSCYTVWKYFCRDHFGWREYSEPVVRLIEEASCRGLREVRFITWHNQYILNIKDGFQQNSCFRREIKRRPLLRSCLLLMPFLQTLGGSSAVPSPCSEPAAAHDLSPAAVTCPSFYPETWIGMDPAQDFIQVPVLKEDKSYRTIYNLFHKTVPETKYKILKILRVQNQFLWEKYKRKKEYMSKKMCGLDRILNERHLFHGTSQDVVDGICKHNFDPRVCGKHATMFGQGSYFARKASYSHNFSKRSPKGVHFMFLAKVLTGRYTVGNHTMRRPPPVEPGSVTSDLYDSCVDNYFEPQIFVIFNDDQSYPYFIIQYEEVSSTVSI
SIO_010081: TIPARP
subclass of: SO_0000673
so part of: TIPARP
location: join(1072142..1073076,1080994..1081162,1082056..1082237,1084628..1084903,1085081..1085528)
location: region:1072142-1085528:1
so has part: feature:1072142-1073076:1:exon
so has part: feature:1080994-1081162:1:exon
so has part: feature:1082056-1082237:1:exon
so has part: feature:1084628-1084903:1:exon
so has part: feature:1085081-1085528:1:exon

XP_021396511.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1072142-1073076:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1080994-1081162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1082056-1082237:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1084628-1084903:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1085081-1085528:1:exon

LEKR1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LEKR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1112565..1145909
location: region:1112565-1145909:1
so has part: feature:1112565-1145909:1:exon
subclass of: SO_0000010

110476130
type: Gene
SIO_000068: ncbigene

position:1112565:1
position: 1112565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1145909:1
position: 1145909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1112565-1145909:1:exon

LEKR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LEKR1
product: leucine, glutamate and lysine rich 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021540838.1
SIO_010081: LEKR1
subclass of: SO_0000673
so part of: LEKR1
location: join(1112565..1112653,1122107..1122321,1126630..1126749,1127150..1127325,1128997..1129182,1138151..1138232,1139748..1139825,1140059..1140262,1141307..1141388,1143906..1144058,1144989..1145909)
location: region:1112565-1145909:1
so has part: feature:1112565-1112653:1:exon
so has part: feature:1122107-1122321:1:exon
so has part: feature:1126630-1126749:1:exon
so has part: feature:1127150-1127325:1:exon
so has part: feature:1128997-1129182:1:exon
so has part: feature:1138151-1138232:1:exon
so has part: feature:1139748-1139825:1:exon
so has part: feature:1140059-1140262:1:exon
so has part: feature:1141307-1141388:1:exon
so has part: feature:1143906-1144058:1:exon
so has part: feature:1144989-1145909:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1112565-1112653:1:exon

position:1112653:1
position: 1112653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1122107-1122321:1:exon

position:1122107:1
position: 1122107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1122321:1
position: 1122321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1126630-1126749:1:exon

position:1126630:1
position: 1126630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1126749:1
position: 1126749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1127150-1127325:1:exon

position:1127150:1
position: 1127150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1127325:1
position: 1127325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1128997-1129182:1:exon

position:1128997:1
position: 1128997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1129182:1
position: 1129182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1138151-1138232:1:exon

position:1138151:1
position: 1138151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1138232:1
position: 1138232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1139748-1139825:1:exon

position:1139748:1
position: 1139748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1139825:1
position: 1139825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1140059-1140262:1:exon

position:1140059:1
position: 1140059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1140262:1
position: 1140262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1141307-1141388:1:exon

position:1141307:1
position: 1141307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1141388:1
position: 1141388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1143906-1144058:1:exon

position:1143906:1
position: 1143906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1144058:1
position: 1144058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1144989-1145909:1:exon

position:1144989:1
position: 1144989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LEKR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LEKR1
product: leucine, glutamate and lysine rich 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021540839.1
SIO_010081: LEKR1
subclass of: SO_0000673
so part of: LEKR1
location: join(1112565..1112653,1122107..1122321,1126630..1126749,1127150..1127325,1128997..1129182,1138151..1138232,1139748..1139825,1140059..1140262,1144989..1145098)
location: region:1112565-1145098:1
so has part: feature:1112565-1112653:1:exon
so has part: feature:1122107-1122321:1:exon
so has part: feature:1126630-1126749:1:exon
so has part: feature:1127150-1127325:1:exon
so has part: feature:1128997-1129182:1:exon
so has part: feature:1138151-1138232:1:exon
so has part: feature:1139748-1139825:1:exon
so has part: feature:1140059-1140262:1:exon
so has part: feature:1144989-1145098:1:exon

position:1145098:1
position: 1145098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1112565-1112653:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1122107-1122321:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1126630-1126749:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1127150-1127325:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1128997-1129182:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1138151-1138232:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1139748-1139825:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1140059-1140262:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1144989-1145098:1:exon

LEKR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LEKR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-, glutamate- and lysine-rich protein 1 isoform X1
translation: MERRGPVHALPEEIRKMSREQTVCKYCGVSYLTLHEFKVMEDKVRAMEKEMKVYKGSLEREQRLQAELQALHHDLERCRAESESKTERIKTLTVELKTKQEEMKTVKADLQYFQEEKEAAYKQSQVLRTTLEHHCSTLNKAVSLFPFIRSELDSIKEVISTNMENFAAMKEEIFRQIKAMSKEALTEIPKLNQRLAKSQRENECLQEKVKHLTEVADTVELKTQQLQTSLQQGNELQSRCRELQKETLDLTNQVETAGLQLQKVTAEMEHYKKLLLVKSTELDVCQKELKKIKYENGIAESRLTKELKEKEESLLVCQQVCKHLQEEVAEKERREEDLKRRTGRSESELETLKALLSQTEQEVLMLKQERELLKSRVEQLQEALRQKVQSEDSWRDKLEKDLAKGEARHKEAILKVREEARVELELERKNQQELITKYQRDHEELQQKIPGLISSATKSLRMEMEILEKKLQDAQMKVAEKDGDKEKEIQSLKRLISELEFQLTMEKSNNESFLDKLRKEMKHKSDELEKLTQEKTQLIHTLSQVQEEVGAGPRKCLVIFTWRRVISKVIQRSVTRKSIEMQRFLKQIHHCFLNTVHHKRYEVLIQQMLKLVFHGKIYY
SIO_010081: LEKR1
subclass of: SO_0000673
so part of: LEKR1
location: join(1112606..1112653,1122107..1122321,1126630..1126749,1127150..1127325,1128997..1129182,1138151..1138232,1139748..1139825,1140059..1140262,1141307..1141388,1143906..1144058,1144989..1145504)
location: region:1112606-1145504:1
so has part: feature:1112606-1112653:1:exon
so has part: feature:1122107-1122321:1:exon
so has part: feature:1126630-1126749:1:exon
so has part: feature:1127150-1127325:1:exon
so has part: feature:1128997-1129182:1:exon
so has part: feature:1138151-1138232:1:exon
so has part: feature:1139748-1139825:1:exon
so has part: feature:1140059-1140262:1:exon
so has part: feature:1141307-1141388:1:exon
so has part: feature:1143906-1144058:1:exon
so has part: feature:1144989-1145504:1:exon

XP_021396513.1
type: Protein
SIO_000068: ncbiprotein

position:1112606:1
position: 1112606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1145504:1
position: 1145504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1112606-1112653:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1122107-1122321:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1126630-1126749:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1127150-1127325:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1128997-1129182:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1138151-1138232:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1139748-1139825:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1140059-1140262:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1141307-1141388:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1143906-1144058:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1144989-1145504:1:exon

LEKR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LEKR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-, glutamate- and lysine-rich protein 1 isoform X2
translation: MERRGPVHALPEEIRKMSREQTVCKYCGVSYLTLHEFKVMEDKVRAMEKEMKVYKGSLEREQRLQAELQALHHDLERCRAESESKTERIKTLTVELKTKQEEMKTVKADLQYFQEEKEAAYKQSQVLRTTLEHHCSTLNKAVSLFPFIRSELDSIKEVISTNMENFAAMKEEIFRQIKAMSKEALTEIPKLNQRLAKSQRENECLQEKVKHLTEVADTVELKTQQLQTSLQQGNELQSRCRELQKETLDLTNQVETAGLQLQKVTAEMEHYKKLLLVKSTELDVCQKELKKIKYENGIAESRLTKELKEKEESLLVCQQVCKHLQEEVAEKERREEDLKRRTGRSESELETLKALLSQTEQEVLMLKQERSQV
SIO_010081: LEKR1
subclass of: SO_0000673
so part of: LEKR1
location: join(1112606..1112653,1122107..1122321,1126630..1126749,1127150..1127325,1128997..1129182,1138151..1138232,1139748..1139825,1140059..1140262,1144989..1145001)
location: region:1112606-1145001:1
so has part: feature:1112606-1112653:1:exon
so has part: feature:1122107-1122321:1:exon
so has part: feature:1126630-1126749:1:exon
so has part: feature:1127150-1127325:1:exon
so has part: feature:1128997-1129182:1:exon
so has part: feature:1138151-1138232:1:exon
so has part: feature:1139748-1139825:1:exon
so has part: feature:1140059-1140262:1:exon
so has part: feature:1144989-1145001:1:exon

XP_021396514.1
type: Protein
SIO_000068: ncbiprotein

position:1145001:1
position: 1145001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1112606-1112653:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1122107-1122321:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1126630-1126749:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1127150-1127325:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1128997-1129182:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1138151-1138232:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1139748-1139825:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1140059-1140262:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1144989-1145001:1:exon

LOC110476132
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110476132
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1152227..1156297)
location: region:1152227-1156297:-1
so has part: feature:1152227-1156297:-1:exon
subclass of: SO_0000011

110476132
type: Gene
SIO_000068: ncbigene

position:1152227:-1
position: 1152227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1156297:-1
position: 1156297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1152227-1156297:-1:exon

LOC110476132
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110476132
product: uncharacterized LOC110476132, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_002466370.2
SIO_010081: LOC110476132
subclass of: SO_0000673
so part of: LOC110476132
location: complement(join(1152227..1152251,1154028..1154172,1155176..1155339,1155419..1156297))
location: region:1152227-1156297:-1
so has part: feature:1155419-1156297:-1:exon
so has part: feature:1155176-1155339:-1:exon
so has part: feature:1154028-1154172:-1:exon
so has part: feature:1152227-1152251:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1155419-1156297:-1:exon

position:1155419:-1
position: 1155419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1155176-1155339:-1:exon

position:1155176:-1
position: 1155176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1155339:-1
position: 1155339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1154028-1154172:-1:exon

position:1154028:-1
position: 1154028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1154172:-1
position: 1154172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1152227-1152251:-1:exon

position:1152251:-1
position: 1152251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110476132
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110476132
product: uncharacterized LOC110476132, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004148653.1
SIO_010081: LOC110476132
subclass of: SO_0000673
so part of: LOC110476132
location: complement(join(1153581..1154172,1155176..1155339,1155419..1156297))
location: region:1153581-1156297:-1
so has part: feature:1155419-1156297:-1:exon
so has part: feature:1155176-1155339:-1:exon
so has part: feature:1153581-1154172:-1:exon

position:1153581:-1
position: 1153581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1155419-1156297:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1155176-1155339:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1153581-1154172:-1:exon

CCNL1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: CCNL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1156453..1168397)
location: region:1156453-1168397:-1
so has part: feature:1156453-1168397:-1:exon
subclass of: SO_0000010

110476131
type: Gene
SIO_000068: ncbigene

position:1156453:-1
position: 1156453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1168397:-1
position: 1168397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1156453-1168397:-1:exon

CCNL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: CCNL1
product: cyclin L1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 16 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021540841.2
SIO_010081: CCNL1
subclass of: SO_0000673
so part of: CCNL1
location: complement(join(1156453..1156963,1157669..1157767,1157888..1157999,1159065..1159206,1159453..1159557,1159685..1159784,1161071..1161135,1161546..1161666,1167621..1167730,1167880..1167954,1168131..1168397))
location: region:1156453-1168397:-1
so has part: feature:1168131-1168397:-1:exon
so has part: feature:1167880-1167954:-1:exon
so has part: feature:1167621-1167730:-1:exon
so has part: feature:1161546-1161666:-1:exon
so has part: feature:1161071-1161135:-1:exon
so has part: feature:1159685-1159784:-1:exon
so has part: feature:1159453-1159557:-1:exon
so has part: feature:1159065-1159206:-1:exon
so has part: feature:1157888-1157999:-1:exon
so has part: feature:1157669-1157767:-1:exon
so has part: feature:1156453-1156963:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1168131-1168397:-1:exon

position:1168131:-1
position: 1168131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1167880-1167954:-1:exon

position:1167880:-1
position: 1167880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167954:-1
position: 1167954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1167621-1167730:-1:exon

position:1167621:-1
position: 1167621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167730:-1
position: 1167730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1161546-1161666:-1:exon

position:1161546:-1
position: 1161546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1161666:-1
position: 1161666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1161071-1161135:-1:exon

position:1161071:-1
position: 1161071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1161135:-1
position: 1161135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1159685-1159784:-1:exon

position:1159685:-1
position: 1159685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1159784:-1
position: 1159784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1159453-1159557:-1:exon

position:1159453:-1
position: 1159453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1159557:-1
position: 1159557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1159065-1159206:-1:exon

position:1159065:-1
position: 1159065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1159206:-1
position: 1159206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1157888-1157999:-1:exon

position:1157888:-1
position: 1157888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1157999:-1
position: 1157999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1157669-1157767:-1:exon

position:1157669:-1
position: 1157669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1157767:-1
position: 1157767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1156453-1156963:-1:exon

position:1156963:-1
position: 1156963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCNL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: CCNL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-L1
translation: MAAAHPGPAAPAAPAPPPPPPAAAAPGILIGDRLYSEVSLTIDHSLIPEERLSPTPSMQDGLDLQCETDLRILGCELIQAAGILLRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIEEAPRRIRDVINVFHHLRQLRAKRTPSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMNDSLRTNVFVRFQPETIACACIYLAARALQIPLPTRPHWFLLFGTTEEEIQEICLTTLKLYTRKKPNYDFLDKEVEKRKMALQEAKLKAKGLNPDGTPALSTLGGFSPASKPSSPREVKAEEKSPVSVNTKTIKKEPEERQQTSKSPYNGLRKESKRSRSSRSASRSRSRTKSRSRSHSPRRHYNNRRSLSGTYSSRSRSRSRSHSGSPRRHHNHGSPHAKAKHGREELKGSSRHGHKRKKSRSRSQSKSREHSEAAKKHRHERGHHRERRERSRSFERSHKGGKHHGSGRSGHGRHRR
SIO_010081: CCNL1
subclass of: SO_0000673
so part of: CCNL1
location: complement(join(1156612..1156963,1157669..1157767,1157888..1157999,1159065..1159206,1159453..1159557,1159685..1159784,1161071..1161135,1161546..1161666,1167621..1167730,1167880..1167954,1168131..1168397))
location: region:1156612-1168397:-1
so has part: feature:1168131-1168397:-1:exon
so has part: feature:1167880-1167954:-1:exon
so has part: feature:1167621-1167730:-1:exon
so has part: feature:1161546-1161666:-1:exon
so has part: feature:1161071-1161135:-1:exon
so has part: feature:1159685-1159784:-1:exon
so has part: feature:1159453-1159557:-1:exon
so has part: feature:1159065-1159206:-1:exon
so has part: feature:1157888-1157999:-1:exon
so has part: feature:1157669-1157767:-1:exon
so has part: feature:1156612-1156963:-1:exon

XP_021396516.2
type: Protein
SIO_000068: ncbiprotein

position:1156612:-1
position: 1156612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1168131-1168397:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1167880-1167954:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1167621-1167730:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1161546-1161666:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1161071-1161135:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1159685-1159784:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1159453-1159557:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1159065-1159206:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1157888-1157999:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1157669-1157767:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1156612-1156963:-1:exon

VEPH1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: VEPH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1185444..1238515)
location: region:1185444-1238515:-1
so has part: feature:1185444-1238515:-1:exon
subclass of: SO_0000010

110476121
type: Gene
SIO_000068: ncbigene

position:1185444:-1
position: 1185444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1238515:-1
position: 1238515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1185444-1238515:-1:exon

VEPH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: VEPH1
product: ventricular zone expressed PH domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021540827.2
SIO_010081: VEPH1
subclass of: SO_0000673
so part of: VEPH1
location: complement(join(1185444..1185680,1186788..1186924,1191947..1192064,1196348..1196482,1198234..1198373,1206612..1206982,1207896..1208105,1213951..1214171,1217896..1218105,1219185..1219351,1233339..1233513,1235784..1235999,1236880..1237150,1237390..1237534,1238391..1238515))
location: region:1185444-1238515:-1
so has part: feature:1238391-1238515:-1:exon
so has part: feature:1237390-1237534:-1:exon
so has part: feature:1236880-1237150:-1:exon
so has part: feature:1235784-1235999:-1:exon
so has part: feature:1233339-1233513:-1:exon
so has part: feature:1219185-1219351:-1:exon
so has part: feature:1217896-1218105:-1:exon
so has part: feature:1213951-1214171:-1:exon
so has part: feature:1207896-1208105:-1:exon
so has part: feature:1206612-1206982:-1:exon
so has part: feature:1198234-1198373:-1:exon
so has part: feature:1196348-1196482:-1:exon
so has part: feature:1191947-1192064:-1:exon
so has part: feature:1186788-1186924:-1:exon
so has part: feature:1185444-1185680:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1238391-1238515:-1:exon

position:1238391:-1
position: 1238391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1237390-1237534:-1:exon

position:1237390:-1
position: 1237390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1237534:-1
position: 1237534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1236880-1237150:-1:exon

position:1236880:-1
position: 1236880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1237150:-1
position: 1237150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1235784-1235999:-1:exon

position:1235784:-1
position: 1235784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1235999:-1
position: 1235999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1233339-1233513:-1:exon

position:1233339:-1
position: 1233339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1233513:-1
position: 1233513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1219185-1219351:-1:exon

position:1219185:-1
position: 1219185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1219351:-1
position: 1219351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1217896-1218105:-1:exon

position:1217896:-1
position: 1217896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1218105:-1
position: 1218105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1213951-1214171:-1:exon

position:1213951:-1
position: 1213951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1214171:-1
position: 1214171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1207896-1208105:-1:exon

position:1207896:-1
position: 1207896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208105:-1
position: 1208105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1206612-1206982:-1:exon

position:1206612:-1
position: 1206612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206982:-1
position: 1206982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1198234-1198373:-1:exon

position:1198234:-1
position: 1198234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1198373:-1
position: 1198373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1196348-1196482:-1:exon

position:1196348:-1
position: 1196348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1196482:-1
position: 1196482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1191947-1192064:-1:exon

position:1191947:-1
position: 1191947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1192064:-1
position: 1192064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1186788-1186924:-1:exon

position:1186788:-1
position: 1186788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1186924:-1
position: 1186924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1185444-1185680:-1:exon

position:1185680:-1
position: 1185680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VEPH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: VEPH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ventricular zone-expressed PH domain-containing protein homolog 1
translation: MHHLFGLVLAQKDLSRAGDLFSLEDAEIEGSLSEALEQIRIISSAADYQTNDNDQAVVEICITRITTAIRETASIEKHGKALVALWESCLEHNLKPSGKDEDAPHAKIASDIMSCILQNYNRPPVMALAVPVAVKFLQRGNKELCRNMSSYLSLAAIAKAELLAEHTETIVRSILQGNSMLLRVLPALYEKQPRPIHARLRELVAPMVQLDPPEQLHLLRLLHTVARKRELGVLRECLPFLFGHLRDPNHSEVILNILLEISSYEPAALAPFLPTLREIGESFPSLIGHTAKIFGAVGHLDEERARTSLLYLVNQLANMEHSFHHLLLLEIKSLTDTFSSILGAQSRDIYRMSNSFSAIARLLARRLGTDGAAAARMENDPEAECPLPLDDLKSVVNGSEEDEKLQVKIQAFEEKINVDSSTPGSVRRYSLGQVSKEERKDMRFNRSKSLALHALRVKGLSSEGGQDEESGDIFSELYLSQEHQEVPFGVQPEAGTCLLSQQSADLPQPARLPDVTLEKAGEGRAEAATSPEEHQDQLYLHLKENLGRVKEFVVEMGRRIPIPEQCVIEDSVQSCVAKLFFSCALKGHYCLYSKSSFTLVSQQPPLWIHIMFLFQQSLFAEPLSVQSSSVQVLKALWEKTQLKGMHSFEAAIIQSTFPHQKDLENIQMHLEEVRFFDLFGYSEEAGAWQCFMCNNPEKATGVNQDGQPLMEGKLKEKQVRWKFIKRWKTRYFTLAGNQLLFRRGKSKDDPDECPIELSKVQSVKAVAKKRRDRSLPRAFEIFTDSRSYVLKAEDEKNAEQWLQCLSVAVAQARERQSREATTYL
SIO_010081: VEPH1
subclass of: SO_0000673
so part of: VEPH1
location: complement(join(1185444..1185680,1186788..1186924,1191947..1192064,1196348..1196482,1198234..1198373,1206612..1206982,1207896..1208105,1213951..1214171,1217896..1218105,1219185..1219351,1233339..1233513,1235784..1235999,1236880..1237017))
location: region:1185444-1237017:-1
so has part: feature:1236880-1237017:-1:exon
so has part: feature:1235784-1235999:-1:exon
so has part: feature:1233339-1233513:-1:exon
so has part: feature:1219185-1219351:-1:exon
so has part: feature:1217896-1218105:-1:exon
so has part: feature:1213951-1214171:-1:exon
so has part: feature:1207896-1208105:-1:exon
so has part: feature:1206612-1206982:-1:exon
so has part: feature:1198234-1198373:-1:exon
so has part: feature:1196348-1196482:-1:exon
so has part: feature:1191947-1192064:-1:exon
so has part: feature:1186788-1186924:-1:exon
so has part: feature:1185444-1185680:-1:exon

XP_021396502.1
type: Protein
SIO_000068: ncbiprotein

position:1237017:-1
position: 1237017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1236880-1237017:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1235784-1235999:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1233339-1233513:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1219185-1219351:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1217896-1218105:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1213951-1214171:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1207896-1208105:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1206612-1206982:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1198234-1198373:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1196348-1196482:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1191947-1192064:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1186788-1186924:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1185444-1185680:-1:exon

PTX3
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: PTX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1224679..1229608
location: region:1224679-1229608:1
so has part: feature:1224679-1229608:1:exon
subclass of: SO_0000010

110476120
type: Gene
SIO_000068: ncbigene

position:1224679:1
position: 1224679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1229608:1
position: 1229608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1224679-1229608:1:exon

PTX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PTX3
product: pentraxin 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 20% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021540826.1
SIO_010081: PTX3
subclass of: SO_0000673
so part of: PTX3
location: join(1224679..1224826,1225311..1225823,1228882..1229608)
location: region:1224679-1229608:1
so has part: feature:1224679-1224826:1:exon
so has part: feature:1225311-1225823:1:exon
so has part: feature:1228882-1229608:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1224679-1224826:1:exon

position:1224826:1
position: 1224826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1225311-1225823:1:exon

position:1225311:1
position: 1225311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1225823:1
position: 1225823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1228882-1229608:1:exon

position:1228882:1
position: 1228882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PTX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentraxin-related protein PTX3
translation: MLPAELLSLLTLLCVFSAAASAVDEDDDYELMYVNLDNEIEAPAPAIEEAASCDCQREHSKWDKLFIMLENSQMKENMMLQALDELPRVELQTLKAELSQLATTLAGTLATVTSHAVSQVEQALARGREQAEEARRLQESEQGKVLEHVLQLSHNVSARLGWLESAWRSRAQEQETALQQDKLDARGDSLILSSLWKELQQTRAELRASQQWAAQHLLPAGCETAILFPMRSRKIFGSVHPTSGMTLSSFTACIWLKVTEALDKTIVFSYGTKFNPYEIQLYLSRAAAVLAVGSAQHRLAAPNVVVPGKWLHLCGTWSSENGSAALWAQGQLAASAWDVAGAHSIPDGGILQLGQEKNGCCVGGGFDESLAFSGKLTGFNLWDRVLSAAEVTAQSAGDTCGARGNVVGWGVTEVLPYGGAQYVS
SIO_010081: PTX3
subclass of: SO_0000673
so part of: PTX3
location: join(1224679..1224826,1225311..1225823,1228882..1229495)
location: region:1224679-1229495:1
so has part: feature:1224679-1224826:1:exon
so has part: feature:1225311-1225823:1:exon
so has part: feature:1228882-1229495:1:exon

XP_021396501.1
type: Protein
SIO_000068: ncbiprotein

position:1229495:1
position: 1229495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1224679-1224826:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1225311-1225823:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1228882-1229495:1:exon

SHOX2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SHOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1352460..1356903)
location: region:1352460-1356903:-1
so has part: feature:1352460-1356903:-1:exon
subclass of: SO_0000010

110476122
type: Gene
SIO_000068: ncbigene

position:1352460:-1
position: 1352460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1356903:-1
position: 1356903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1352460-1356903:-1:exon

SHOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SHOX2
product: short stature homeobox 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031505688.1
SIO_010081: SHOX2
subclass of: SO_0000673
so part of: SHOX2
location: complement(join(1352460..1352756,1352843..1352931,1353013..1353070,1355420..1355628,1356639..1356903))
location: region:1352460-1356903:-1
so has part: feature:1356639-1356903:-1:exon
so has part: feature:1355420-1355628:-1:exon
so has part: feature:1353013-1353070:-1:exon
so has part: feature:1352843-1352931:-1:exon
so has part: feature:1352460-1352756:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1356639-1356903:-1:exon

position:1356639:-1
position: 1356639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1355420-1355628:-1:exon

position:1355420:-1
position: 1355420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1355628:-1
position: 1355628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1353013-1353070:-1:exon

position:1353013:-1
position: 1353013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1353070:-1
position: 1353070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1352843-1352931:-1:exon

position:1352843:-1
position: 1352843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1352931:-1
position: 1352931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1352460-1352756:-1:exon

position:1352756:-1
position: 1352756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SHOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SHOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: short stature homeobox protein 2
translation: MEELTAFVSKSFDPKAKEKKELITYREVLESGPLRGGGGPREPGGAAAEPGREDTGSPAARPAGRSPPREPDAAAERAAEAATPKLSDVSPELKERKEDAKAMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKGVLIGAATQFEACRVAPYVNVGALRMPFQQVQAQLQLDSAVAHAHHHLHPHLAHAPYMMFPAPPFGLPLATLAESASAASVVAAAAAAKTTSKNSSIADLRLKAKKHAAALGL
SIO_010081: SHOX2
subclass of: SO_0000673
so part of: SHOX2
location: complement(join(1352505..1352756,1352843..1352931,1353013..1353070,1355420..1355628,1356639..1356903))
location: region:1352505-1356903:-1
so has part: feature:1356639-1356903:-1:exon
so has part: feature:1355420-1355628:-1:exon
so has part: feature:1353013-1353070:-1:exon
so has part: feature:1352843-1352931:-1:exon
so has part: feature:1352505-1352756:-1:exon

XP_031361548.1
type: Protein
SIO_000068: ncbiprotein

position:1352505:-1
position: 1352505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1356639-1356903:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1355420-1355628:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1353013-1353070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1352843-1352931:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352505-1352756:-1:exon

RSRC1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: RSRC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1358700..1463711
location: region:1358700-1463711:1
so has part: feature:1358700-1463711:1:exon
subclass of: SO_0000010

110476133
type: Gene
SIO_000068: ncbigene

position:1358700:1
position: 1358700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1463711:1
position: 1463711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1358700-1463711:1:exon

RSRC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: RSRC1
product: arginine and serine rich coiled-coil 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021540842.2
SIO_010081: RSRC1
subclass of: SO_0000673
so part of: RSRC1
location: join(1358700..1358756,1359148..1359190,1359979..1360173,1363028..1363147,1385193..1385363,1407163..1407199,1420545..1420596,1444304..1444372,1461395..1461501,1462505..1462645,1463395..1463711)
location: region:1358700-1463711:1
so has part: feature:1358700-1358756:1:exon
so has part: feature:1359148-1359190:1:exon
so has part: feature:1359979-1360173:1:exon
so has part: feature:1363028-1363147:1:exon
so has part: feature:1385193-1385363:1:exon
so has part: feature:1407163-1407199:1:exon
so has part: feature:1420545-1420596:1:exon
so has part: feature:1444304-1444372:1:exon
so has part: feature:1461395-1461501:1:exon
so has part: feature:1462505-1462645:1:exon
so has part: feature:1463395-1463711:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1358700-1358756:1:exon

position:1358756:1
position: 1358756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1359148-1359190:1:exon

position:1359148:1
position: 1359148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1359190:1
position: 1359190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1359979-1360173:1:exon

position:1359979:1
position: 1359979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1360173:1
position: 1360173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1363028-1363147:1:exon

position:1363028:1
position: 1363028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1363147:1
position: 1363147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1385193-1385363:1:exon

position:1385193:1
position: 1385193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1385363:1
position: 1385363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1407163-1407199:1:exon

position:1407163:1
position: 1407163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1407199:1
position: 1407199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1420545-1420596:1:exon

position:1420545:1
position: 1420545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1420596:1
position: 1420596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1444304-1444372:1:exon

position:1444304:1
position: 1444304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1444372:1
position: 1444372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1461395-1461501:1:exon

position:1461395:1
position: 1461395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1461501:1
position: 1461501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1462505-1462645:1:exon

position:1462505:1
position: 1462505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1462645:1
position: 1462645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1463395-1463711:1:exon

position:1463395:1
position: 1463395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RSRC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: RSRC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/Arginine-related protein 53
translation: MGRRSSDTEEEGRSRRKKKHRRRSSSSSSSDSRAHSRKKSGRKSRSRSRSRDLPSWSHSYEKRRRHRSSSSSSYGSRRKRSRSRGRGKSYRSQRSRSKSRTRRSRSRARQRSYSRSSERSGQRRTPSASRERRRGRDKDKAKDKDKGRGKEKEAHGTKAGDSANIKAGLEHLTPAEQAKARLQLVLEAAAKADEALKAKERSEEEAKRRKEEDQATLLDQVKRVKEIEAIESDAFVPQTFRSSKEVKKSAEPAELQQEPVSVGATEAAAAEKEPPAANIPTAIKYQDDNSLAHPNLFMEKAEAEEKWFQRLVALRQERLMGSPVA
SIO_010081: RSRC1
subclass of: SO_0000673
so part of: RSRC1
location: join(1359986..1360173,1363028..1363147,1385193..1385363,1407163..1407199,1420545..1420596,1444304..1444372,1461395..1461501,1462505..1462645,1463395..1463487)
location: region:1359986-1463487:1
so has part: feature:1359986-1360173:1:exon
so has part: feature:1363028-1363147:1:exon
so has part: feature:1385193-1385363:1:exon
so has part: feature:1407163-1407199:1:exon
so has part: feature:1420545-1420596:1:exon
so has part: feature:1444304-1444372:1:exon
so has part: feature:1461395-1461501:1:exon
so has part: feature:1462505-1462645:1:exon
so has part: feature:1463395-1463487:1:exon

XP_021396517.2
type: Protein
SIO_000068: ncbiprotein

position:1359986:1
position: 1359986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1463487:1
position: 1463487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1359986-1360173:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1363028-1363147:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1385193-1385363:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1407163-1407199:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1420545-1420596:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1444304-1444372:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1461395-1461501:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1462505-1462645:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1463395-1463487:1:exon

LOC110476134
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110476134
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1478927..1498362
location: region:1478927-1498362:1
so has part: feature:1478927-1498362:1:exon
subclass of: SO_0000010

110476134
type: Gene
SIO_000068: ncbigene

position:1478927:1
position: 1478927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1498362:1
position: 1498362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1478927-1498362:1:exon

LOC110476134
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110476134
product: myeloid leukemia factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 17 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021540844.1
SIO_010081: LOC110476134
subclass of: SO_0000673
so part of: LOC110476134
location: join(1478927..1479022,1489762..1489936,1492872..1492916,1493757..1493846,1494149..1494277,1495723..1495882,1496147..1496279,1496427..1498362)
location: region:1478927-1498362:1
so has part: feature:1478927-1479022:1:exon
so has part: feature:1489762-1489936:1:exon
so has part: feature:1492872-1492916:1:exon
so has part: feature:1493757-1493846:1:exon
so has part: feature:1494149-1494277:1:exon
so has part: feature:1495723-1495882:1:exon
so has part: feature:1496147-1496279:1:exon
so has part: feature:1496427-1498362:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1478927-1479022:1:exon

position:1479022:1
position: 1479022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1489762-1489936:1:exon

position:1489762:1
position: 1489762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1489936:1
position: 1489936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1492872-1492916:1:exon

position:1492872:1
position: 1492872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1492916:1
position: 1492916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1493757-1493846:1:exon

position:1493757:1
position: 1493757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1493846:1
position: 1493846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1494149-1494277:1:exon

position:1494149:1
position: 1494149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1494277:1
position: 1494277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1495723-1495882:1:exon

position:1495723:1
position: 1495723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1495882:1
position: 1495882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1496147-1496279:1:exon

position:1496147:1
position: 1496147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1496279:1
position: 1496279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1496427-1498362:1:exon

position:1496427:1
position: 1496427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110476134
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110476134
product: myeloid leukemia factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021540843.1
SIO_010081: LOC110476134
subclass of: SO_0000673
so part of: LOC110476134
location: join(1478927..1479022,1489762..1489936,1493757..1493846,1494149..1494277,1495723..1495882,1496147..1496279,1496427..1498362)
location: region:1478927-1498362:1
so has part: feature:1478927-1479022:1:exon
so has part: feature:1489762-1489936:1:exon
so has part: feature:1493757-1493846:1:exon
so has part: feature:1494149-1494277:1:exon
so has part: feature:1495723-1495882:1:exon
so has part: feature:1496147-1496279:1:exon
so has part: feature:1496427-1498362:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1478927-1479022:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1489762-1489936:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1493757-1493846:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1494149-1494277:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1495723-1495882:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1496147-1496279:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1496427-1498362:1:exon

LOC110476134
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110476134
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myeloid leukemia factor 1 isoform X2
translation: MFGGLGRCFEDDPFFRDPYAAHHEHMRQVMRSFSEPFGRDPFPSLPEGGERPEERRAGGRAPRDARVATRDSRRVTSFSLMPFAGFGRGWDADFGDPFSAMDRMMSNMRNSMLEMHRKFDDLSIQPEGHSFSSSSVMTYSKVGDEPPKVFQASAQTRTAPGGVKETRKALKDSESGVEKISVGHHIQDRAHVIKKSKNSKTGDEELNQEFINLDESEADTFNEEWQKEVMKFRPCRSREAVQASRSRSGHYNHRESGARRGKLLGAPGSRVPRDSLEALSVKGTPVPLKGSRK
SIO_010081: LOC110476134
subclass of: SO_0000673
so part of: LOC110476134
location: join(1478976..1479022,1489762..1489936,1492872..1492916,1493757..1493846,1494149..1494277,1495723..1495882,1496147..1496279,1496427..1496529)
location: region:1478976-1496529:1
so has part: feature:1478976-1479022:1:exon
so has part: feature:1489762-1489936:1:exon
so has part: feature:1492872-1492916:1:exon
so has part: feature:1493757-1493846:1:exon
so has part: feature:1494149-1494277:1:exon
so has part: feature:1495723-1495882:1:exon
so has part: feature:1496147-1496279:1:exon
so has part: feature:1496427-1496529:1:exon

XP_021396519.1
type: Protein
SIO_000068: ncbiprotein

position:1478976:1
position: 1478976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1496529:1
position: 1496529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1478976-1479022:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1489762-1489936:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1492872-1492916:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1493757-1493846:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1494149-1494277:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1495723-1495882:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1496147-1496279:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1496427-1496529:1:exon

LOC110476134
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110476134
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myeloid leukemia factor 1 isoform X1
translation: MFGGLGRCFEDDPFFRDPYAAHHEHMRQVMRSFSEPFGRDPFPSLPEGGERPEERRAGGRAPRDARVATRDSRRWDADFGDPFSAMDRMMSNMRNSMLEMHRKFDDLSIQPEGHSFSSSSVMTYSKVGDEPPKVFQASAQTRTAPGGVKETRKALKDSESGVEKISVGHHIQDRAHVIKKSKNSKTGDEELNQEFINLDESEADTFNEEWQKEVMKFRPCRSREAVQASRSRSGHYNHRESGARRGKLLGAPGSRVPRDSLEALSVKGTPVPLKGSRK
SIO_010081: LOC110476134
subclass of: SO_0000673
so part of: LOC110476134
location: join(1478976..1479022,1489762..1489936,1493757..1493846,1494149..1494277,1495723..1495882,1496147..1496279,1496427..1496529)
location: region:1478976-1496529:1
so has part: feature:1478976-1479022:1:exon
so has part: feature:1489762-1489936:1:exon
so has part: feature:1493757-1493846:1:exon
so has part: feature:1494149-1494277:1:exon
so has part: feature:1495723-1495882:1:exon
so has part: feature:1496147-1496279:1:exon
so has part: feature:1496427-1496529:1:exon

XP_021396518.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1478976-1479022:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1489762-1489936:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1493757-1493846:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1494149-1494277:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1495723-1495882:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1496147-1496279:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1496427-1496529:1:exon

LOC110476623
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110476623
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1499354..1511808
location: region:1499354-1511808:1
so has part: feature:1499354-1511808:1:exon
subclass of: SO_0000010

110476623
type: Gene
SIO_000068: ncbigene

position:1499354:1
position: 1499354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1511808:1
position: 1511808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1499354-1511808:1:exon

LOC110476623
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110476623
product: myeloid leukemia factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021541722.2
SIO_010081: LOC110476623
subclass of: SO_0000673
so part of: LOC110476623
location: join(1499354..1499445,1503209..1503383,1507206..1507295,1507598..1507726,1509172..1509331,1509596..1509728,1509876..1511808)
location: region:1499354-1511808:1
so has part: feature:1499354-1499445:1:exon
so has part: feature:1503209-1503383:1:exon
so has part: feature:1507206-1507295:1:exon
so has part: feature:1507598-1507726:1:exon
so has part: feature:1509172-1509331:1:exon
so has part: feature:1509596-1509728:1:exon
so has part: feature:1509876-1511808:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1499354-1499445:1:exon

position:1499445:1
position: 1499445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1503209-1503383:1:exon

position:1503209:1
position: 1503209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1503383:1
position: 1503383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1507206-1507295:1:exon

position:1507206:1
position: 1507206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1507295:1
position: 1507295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1507598-1507726:1:exon

position:1507598:1
position: 1507598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1507726:1
position: 1507726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1509172-1509331:1:exon

position:1509172:1
position: 1509172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1509331:1
position: 1509331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1509596-1509728:1:exon

position:1509596:1
position: 1509596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1509728:1
position: 1509728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1509876-1511808:1:exon

position:1509876:1
position: 1509876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110476623
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110476623
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myeloid leukemia factor 1 isoform X1
translation: MCVFNSSLSLRLSLSPLNASTAWNTRDPYAAHHEHMRQVMRSFSEPFGRDPFPSLPEGGERPEERRAGGRAPRDARVATRDSRRWDADFGDPFSAMDRMMSNMRNSMLEMHRKFDDLSIQPEGHSFSSSSVMTYSKVGDEPPKVFQASAQTCTAPGGVKETRKALKDSESGVEKISVGHHIQDRAHVIKKSKNSKTGDEELNQEFINLDESEADTFNEEWQKEVMKFRPCRSREAVQASRSRSGHYNHRESGARRGKLLGAPGSRVPRDSLEALSVKGTPVPLKGSRK
SIO_010081: LOC110476623
subclass of: SO_0000673
so part of: LOC110476623
location: join(1499369..1499445,1503209..1503383,1507206..1507295,1507598..1507726,1509172..1509331,1509596..1509728,1509876..1509978)
location: region:1499369-1509978:1
so has part: feature:1499369-1499445:1:exon
so has part: feature:1503209-1503383:1:exon
so has part: feature:1507206-1507295:1:exon
so has part: feature:1507598-1507726:1:exon
so has part: feature:1509172-1509331:1:exon
so has part: feature:1509596-1509728:1:exon
so has part: feature:1509876-1509978:1:exon

XP_021397397.1
type: Protein
SIO_000068: ncbiprotein

position:1499369:1
position: 1499369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1509978:1
position: 1509978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1499369-1499445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1503209-1503383:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1507206-1507295:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1507598-1507726:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1509172-1509331:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1509596-1509728:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1509876-1509978:1:exon

LOC110476623
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110476623
product: myeloid leukemia factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021541723.2
SIO_010081: LOC110476623
subclass of: SO_0000673
so part of: LOC110476623
location: join(1501704..1502237,1503209..1503383,1507206..1507295,1507598..1507726,1509172..1509331,1509596..1509728,1509876..1511808)
location: region:1501704-1511808:1
so has part: feature:1501704-1502237:1:exon
so has part: feature:1503209-1503383:1:exon
so has part: feature:1507206-1507295:1:exon
so has part: feature:1507598-1507726:1:exon
so has part: feature:1509172-1509331:1:exon
so has part: feature:1509596-1509728:1:exon
so has part: feature:1509876-1511808:1:exon

position:1501704:1
position: 1501704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1501704-1502237:1:exon

position:1502237:1
position: 1502237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1503209-1503383:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1507206-1507295:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1507598-1507726:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1509172-1509331:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1509596-1509728:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1509876-1511808:1:exon

LOC110476623
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110476623
product: myeloid leukemia factor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021541725.2
SIO_010081: LOC110476623
subclass of: SO_0000673
so part of: LOC110476623
location: join(1501705..1502154,1503209..1503383,1507206..1507295,1507598..1507726,1509172..1509331,1509596..1509728,1509876..1511808)
location: region:1501705-1511808:1
so has part: feature:1501705-1502154:1:exon
so has part: feature:1503209-1503383:1:exon
so has part: feature:1507206-1507295:1:exon
so has part: feature:1507598-1507726:1:exon
so has part: feature:1509172-1509331:1:exon
so has part: feature:1509596-1509728:1:exon
so has part: feature:1509876-1511808:1:exon

position:1501705:1
position: 1501705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1501705-1502154:1:exon

position:1502154:1
position: 1502154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1503209-1503383:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1507206-1507295:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1507598-1507726:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1509172-1509331:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1509596-1509728:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1509876-1511808:1:exon

LOC110476623
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110476623
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myeloid leukemia factor 1 isoform X2
translation: MEGGNEAGDPYAAHHEHMRQVMRSFSEPFGRDPFPSLPEGGERPEERRAGGRAPRDARVATRDSRRWDADFGDPFSAMDRMMSNMRNSMLEMHRKFDDLSIQPEGHSFSSSSVMTYSKVGDEPPKVFQASAQTCTAPGGVKETRKALKDSESGVEKISVGHHIQDRAHVIKKSKNSKTGDEELNQEFINLDESEADTFNEEWQKEVMKFRPCRSREAVQASRSRSGHYNHRESGARRGKLLGAPGSRVPRDSLEALSVKGTPVPLKGSRK
SIO_010081: LOC110476623
subclass of: SO_0000673
so part of: LOC110476623
location: join(1502215..1502237,1503209..1503383,1507206..1507295,1507598..1507726,1509172..1509331,1509596..1509728,1509876..1509978)
location: region:1502215-1509978:1
so has part: feature:1502215-1502237:1:exon
so has part: feature:1503209-1503383:1:exon
so has part: feature:1507206-1507295:1:exon
so has part: feature:1507598-1507726:1:exon
so has part: feature:1509172-1509331:1:exon
so has part: feature:1509596-1509728:1:exon
so has part: feature:1509876-1509978:1:exon

XP_021397398.1
type: Protein
SIO_000068: ncbiprotein

position:1502215:1
position: 1502215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1502215-1502237:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1503209-1503383:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1507206-1507295:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1507598-1507726:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1509172-1509331:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1509596-1509728:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1509876-1509978:1:exon

LOC110476623
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110476623
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myeloid leukemia factor 1 isoform X3
translation: MRQVMRSFSEPFGRDPFPSLPEGGERPEERRAGGRAPRDARVATRDSRRWDADFGDPFSAMDRMMSNMRNSMLEMHRKFDDLSIQPEGHSFSSSSVMTYSKVGDEPPKVFQASAQTCTAPGGVKETRKALKDSESGVEKISVGHHIQDRAHVIKKSKNSKTGDEELNQEFINLDESEADTFNEEWQKEVMKFRPCRSREAVQASRSRSGHYNHRESGARRGKLLGAPGSRVPRDSLEALSVKGTPVPLKGSRK
SIO_010081: LOC110476623
subclass of: SO_0000673
so part of: LOC110476623
location: join(1503237..1503383,1507206..1507295,1507598..1507726,1509172..1509331,1509596..1509728,1509876..1509978)
location: region:1503237-1509978:1
so has part: feature:1503237-1503383:1:exon
so has part: feature:1507206-1507295:1:exon
so has part: feature:1507598-1507726:1:exon
so has part: feature:1509172-1509331:1:exon
so has part: feature:1509596-1509728:1:exon
so has part: feature:1509876-1509978:1:exon

XP_021397400.1
type: Protein
SIO_000068: ncbiprotein

position:1503237:1
position: 1503237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1503237-1503383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1507206-1507295:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1507598-1507726:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1509172-1509331:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1509596-1509728:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1509876-1509978:1:exon

LOC110476623
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110476623
product: myeloid leukemia factor 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_031505604.1
SIO_010081: LOC110476623
subclass of: SO_0000673
so part of: LOC110476623
location: join(1505945..1506365,1507206..1507295,1507598..1507726,1509172..1509331,1509596..1509728,1509876..1511808)
location: region:1505945-1511808:1
so has part: feature:1505945-1506365:1:exon
so has part: feature:1507206-1507295:1:exon
so has part: feature:1507598-1507726:1:exon
so has part: feature:1509172-1509331:1:exon
so has part: feature:1509596-1509728:1:exon
so has part: feature:1509876-1511808:1:exon

position:1505945:1
position: 1505945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1505945-1506365:1:exon

position:1506365:1
position: 1506365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1507206-1507295:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1507598-1507726:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1509172-1509331:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1509596-1509728:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1509876-1511808:1:exon

LOC110476623
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110476623
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myeloid leukemia factor 1 isoform X4
translation: MGNVSCNLLHIKVISAVPDNNSRCCSFFFQVTSFSLMPFAGFGRGWDADFGDPFSAMDRMMSNMRNSMLEMHRKFDDLSIQPEGHSFSSSSVMTYSKVGDEPPKVFQASAQTCTAPGGVKETRKALKDSESGVEKISVGHHIQDRAHVIKKSKNSKTGDEELNQEFINLDESEADTFNEEWQKEVMKFRPCRSREAVQASRSRSGHYNHRESGARRGKLLGAPGSRVPRDSLEALSVKGTPVPLKGSRK
SIO_010081: LOC110476623
subclass of: SO_0000673
so part of: LOC110476623
location: join(1506231..1506365,1507206..1507295,1507598..1507726,1509172..1509331,1509596..1509728,1509876..1509978)
location: region:1506231-1509978:1
so has part: feature:1506231-1506365:1:exon
so has part: feature:1507206-1507295:1:exon
so has part: feature:1507598-1507726:1:exon
so has part: feature:1509172-1509331:1:exon
so has part: feature:1509596-1509728:1:exon
so has part: feature:1509876-1509978:1:exon

XP_031361464.1
type: Protein
SIO_000068: ncbiprotein

position:1506231:1
position: 1506231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1506231-1506365:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1507206-1507295:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1507598-1507726:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1509172-1509331:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1509596-1509728:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1509876-1509978:1:exon

GFM1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: GFM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1514971..1531621
location: region:1514971-1531621:1
so has part: feature:1514971-1531621:1:exon
subclass of: SO_0000010

110476611
type: Gene
SIO_000068: ncbigene

position:1514971:1
position: 1514971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1531621:1
position: 1531621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1514971-1531621:1:exon

GFM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: GFM1
product: G elongation factor mitochondrial 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031505605.1
SIO_010081: GFM1
subclass of: SO_0000673
so part of: GFM1
location: join(1514971..1515123,1515453..1515585,1516015..1516219,1516976..1517092,1517606..1517756,1518069..1518223,1518957..1519041,1520113..1520250,1520703..1520804,1520894..1520950,1521232..1521369,1522051..1522133,1528210..1528372,1529083..1529227,1530224..1530384,1530893..1530946,1531206..1531621)
location: region:1514971-1531621:1
so has part: feature:1514971-1515123:1:exon
so has part: feature:1515453-1515585:1:exon
so has part: feature:1516015-1516219:1:exon
so has part: feature:1516976-1517092:1:exon
so has part: feature:1517606-1517756:1:exon
so has part: feature:1518069-1518223:1:exon
so has part: feature:1518957-1519041:1:exon
so has part: feature:1520113-1520250:1:exon
so has part: feature:1520703-1520804:1:exon
so has part: feature:1520894-1520950:1:exon
so has part: feature:1521232-1521369:1:exon
so has part: feature:1522051-1522133:1:exon
so has part: feature:1528210-1528372:1:exon
so has part: feature:1529083-1529227:1:exon
so has part: feature:1530224-1530384:1:exon
so has part: feature:1530893-1530946:1:exon
so has part: feature:1531206-1531621:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1514971-1515123:1:exon

position:1515123:1
position: 1515123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1515453-1515585:1:exon

position:1515453:1
position: 1515453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1515585:1
position: 1515585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1516015-1516219:1:exon

position:1516015:1
position: 1516015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1516219:1
position: 1516219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1516976-1517092:1:exon

position:1516976:1
position: 1516976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1517092:1
position: 1517092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1517606-1517756:1:exon

position:1517606:1
position: 1517606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1517756:1
position: 1517756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1518069-1518223:1:exon

position:1518069:1
position: 1518069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1518223:1
position: 1518223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1518957-1519041:1:exon

position:1518957:1
position: 1518957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1519041:1
position: 1519041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1520113-1520250:1:exon

position:1520113:1
position: 1520113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1520250:1
position: 1520250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1520703-1520804:1:exon

position:1520703:1
position: 1520703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1520804:1
position: 1520804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1520894-1520950:1:exon

position:1520894:1
position: 1520894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1520950:1
position: 1520950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1521232-1521369:1:exon

position:1521232:1
position: 1521232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1521369:1
position: 1521369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1522051-1522133:1:exon

position:1522051:1
position: 1522051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1522133:1
position: 1522133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1528210-1528372:1:exon

position:1528210:1
position: 1528210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1528372:1
position: 1528372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1529083-1529227:1:exon

position:1529083:1
position: 1529083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1529227:1
position: 1529227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1530224-1530384:1:exon

position:1530224:1
position: 1530224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1530384:1
position: 1530384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1530893-1530946:1:exon

position:1530893:1
position: 1530893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1530946:1
position: 1530946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1531206-1531621:1:exon

position:1531206:1
position: 1531206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GFM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: GFM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elongation factor G, mitochondrial
translation: MHEVKGKDGVGAVMDSMELERQRGITIQSAATYTMWKDTNINIIDTPGHVDFTIEVERSLRVLDGAILVLCAVGGVQCQTITVNRQMKRYNVPFLTFINKLDRMGSNPARAVQQLRSKLKHNAAFVQIPIGLEGNFRGIIDLIEEKAIYFDGALGQTLREEEIPAELRAEAAERRRELIECVANADELLGELFLEEKIPTAAQLKLAIRRATLQKCFTPVLVGSALKNKGVQPLLDAVLEYLPNPSEVENYALLNQGDSQDQTKFLLNSARDDSQPFIGLAFKLEAGRFGQLTYVRVYQGMLKKSDYIYNTRTGKRVRVQRLVRMHSDNMEDVNEVYAGDICALFGIDCASGDTFTDKTSTDISMESIHVPDPVISVAMKPSNKNDLDKFSKGLGRFTREDPTFRTHFDEESKETIVSGMGELHLEIYAQRMEREYGCPCTMGKPKVAFRENISAPVPFEFTHKKQSGGAGQYGKVIGVLEPLEPEDFTKLEFEDRTIGTNIPKQFVPAVEKGFRDACEKGLLSGHRISGVRFVLEDGAHHMVDSNEISFIRAGEGALKQAMENAAVRILEPIMAVEVVAPVEFQGAVIAGINRRHGVITGQDGSEGYFTLYAEVPLNDMFGYATELRSCTEGKGEYTMEYSKYHPCSASTQEEIINKYLEATGRLPAKKGKAKS
SIO_010081: GFM1
subclass of: SO_0000673
so part of: GFM1
location: join(1515115..1515123,1515453..1515585,1516015..1516219,1516976..1517092,1517606..1517756,1518069..1518223,1518957..1519041,1520113..1520250,1520703..1520804,1520894..1520950,1521232..1521369,1522051..1522133,1528210..1528372,1529083..1529227,1530224..1530384,1530893..1530946,1531206..1531337)
location: region:1515115-1531337:1
so has part: feature:1515115-1515123:1:exon
so has part: feature:1515453-1515585:1:exon
so has part: feature:1516015-1516219:1:exon
so has part: feature:1516976-1517092:1:exon
so has part: feature:1517606-1517756:1:exon
so has part: feature:1518069-1518223:1:exon
so has part: feature:1518957-1519041:1:exon
so has part: feature:1520113-1520250:1:exon
so has part: feature:1520703-1520804:1:exon
so has part: feature:1520894-1520950:1:exon
so has part: feature:1521232-1521369:1:exon
so has part: feature:1522051-1522133:1:exon
so has part: feature:1528210-1528372:1:exon
so has part: feature:1529083-1529227:1:exon
so has part: feature:1530224-1530384:1:exon
so has part: feature:1530893-1530946:1:exon
so has part: feature:1531206-1531337:1:exon

XP_031361465.1
type: Protein
SIO_000068: ncbiprotein

position:1515115:1
position: 1515115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1531337:1
position: 1531337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1515115-1515123:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1515453-1515585:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1516015-1516219:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1516976-1517092:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1517606-1517756:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1518069-1518223:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1518957-1519041:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1520113-1520250:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1520703-1520804:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1520894-1520950:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1521232-1521369:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1522051-1522133:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1528210-1528372:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1529083-1529227:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1530224-1530384:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1530893-1530946:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1531206-1531337:1:exon

LXN
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LXN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1524424..1527853)
location: region:1524424-1527853:-1
so has part: feature:1524424-1527853:-1:exon
subclass of: SO_0000010

110476622
type: Gene
SIO_000068: ncbigene

position:1524424:-1
position: 1524424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1527853:-1
position: 1527853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1524424-1527853:-1:exon

LXN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LXN
product: latexin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031505643.1
SIO_010081: LXN
subclass of: SO_0000673
so part of: LXN
location: complement(join(1524424..1524432,1524667..1524803,1525310..1525484,1525942..1526004,1527703..1527853))
location: region:1524424-1527853:-1
so has part: feature:1527703-1527853:-1:exon
so has part: feature:1525942-1526004:-1:exon
so has part: feature:1525310-1525484:-1:exon
so has part: feature:1524667-1524803:-1:exon
so has part: feature:1524424-1524432:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1527703-1527853:-1:exon

position:1527703:-1
position: 1527703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1525942-1526004:-1:exon

position:1525942:-1
position: 1525942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1526004:-1
position: 1526004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1525310-1525484:-1:exon

position:1525310:-1
position: 1525310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1525484:-1
position: 1525484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1524667-1524803:-1:exon

position:1524667:-1
position: 1524667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1524803:-1
position: 1524803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1524424-1524432:-1:exon

position:1524432:-1
position: 1524432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LXN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LXN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: latexin
translation: MELPPGRFPAARAAAPALGYLRYLRGGPGRGLRLRELRRARRQDIDDVGHKYYLELELEDVLDKDRTVNCTAEVLYHLDSKNSAPDVQVTVQGELRSTEEADKEFYNWIRSLEKELVAENIPDSHGNVPPELEPIHLLAWVASGYVIWQNSTENTKFHLAQVKHVKQVRK
SIO_010081: LXN
subclass of: SO_0000673
so part of: LXN
location: complement(join(1524424..1524432,1524667..1524803,1525310..1525484,1525942..1526004,1527703..1527831))
location: region:1524424-1527831:-1
so has part: feature:1527703-1527831:-1:exon
so has part: feature:1525942-1526004:-1:exon
so has part: feature:1525310-1525484:-1:exon
so has part: feature:1524667-1524803:-1:exon
so has part: feature:1524424-1524432:-1:exon

XP_031361503.1
type: Protein
SIO_000068: ncbiprotein

position:1527831:-1
position: 1527831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1527703-1527831:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1525942-1526004:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1525310-1525484:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1524667-1524803:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1524424-1524432:-1:exon

LOC110476610
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110476610
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1533801..1537115)
location: region:1533801-1537115:-1
so has part: feature:1533801-1537115:-1:exon
subclass of: SO_0000010

110476610
type: Gene
SIO_000068: ncbigene

position:1533801:-1
position: 1533801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1537115:-1
position: 1537115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1533801-1537115:-1:exon

LOC110476610
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110476610
product: ovocalyxin-32
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031505606.1
SIO_010081: LOC110476610
subclass of: SO_0000673
so part of: LOC110476610
location: complement(join(1533801..1534366,1534456..1534518,1535128..1535264,1535853..1536027,1536943..1537115))
location: region:1533801-1537115:-1
so has part: feature:1536943-1537115:-1:exon
so has part: feature:1535853-1536027:-1:exon
so has part: feature:1535128-1535264:-1:exon
so has part: feature:1534456-1534518:-1:exon
so has part: feature:1533801-1534366:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1536943-1537115:-1:exon

position:1536943:-1
position: 1536943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1535853-1536027:-1:exon

position:1535853:-1
position: 1535853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1536027:-1
position: 1536027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1535128-1535264:-1:exon

position:1535128:-1
position: 1535128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1535264:-1
position: 1535264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1534456-1534518:-1:exon

position:1534456:-1
position: 1534456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1534518:-1
position: 1534518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1533801-1534366:-1:exon

position:1534366:-1
position: 1534366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110476610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110476610
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ovocalyxin-32
translation: MWEKSTETLGYFLAQVKSVRQWIRKDDFIEFDYTVLLHEMPTQEIISCHMRLTWLPGRPLKVKHSCASEGHGAEEGSGAESGSAAAPSAEKGASF
SIO_010081: LOC110476610
subclass of: SO_0000673
so part of: LOC110476610
location: complement(join(1534208..1534366,1534456..1534518,1535128..1535193))
location: region:1534208-1535193:-1
so has part: feature:1535128-1535193:-1:exon
so has part: feature:1534456-1534518:-1:exon
so has part: feature:1534208-1534366:-1:exon

XP_031361466.1
type: Protein
SIO_000068: ncbiprotein

position:1534208:-1
position: 1534208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1535193:-1
position: 1535193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1535128-1535193:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1534456-1534518:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1534208-1534366:-1:exon

MFSD1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: MFSD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1560740..1570970
location: region:1560740-1570970:1
so has part: feature:1560740-1570970:1:exon
subclass of: SO_0000010

110476609
type: Gene
SIO_000068: ncbigene

position:1560740:1
position: 1560740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1570970:1
position: 1570970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1560740-1570970:1:exon

MFSD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: MFSD1
product: major facilitator superfamily domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021541704.1
SIO_010081: MFSD1
subclass of: SO_0000673
so part of: MFSD1
location: join(1560740..1560893,1560970..1561207,1563145..1563187,1563660..1563727,1564108..1564216,1565008..1565110,1565772..1565870,1566380..1566491,1566960..1567016,1567520..1567676,1568829..1568926,1570216..1570328,1570701..1570748,1570906..1570970)
location: region:1560740-1570970:1
so has part: feature:1560740-1560893:1:exon
so has part: feature:1560970-1561207:1:exon
so has part: feature:1563145-1563187:1:exon
so has part: feature:1563660-1563727:1:exon
so has part: feature:1564108-1564216:1:exon
so has part: feature:1565008-1565110:1:exon
so has part: feature:1565772-1565870:1:exon
so has part: feature:1566380-1566491:1:exon
so has part: feature:1566960-1567016:1:exon
so has part: feature:1567520-1567676:1:exon
so has part: feature:1568829-1568926:1:exon
so has part: feature:1570216-1570328:1:exon
so has part: feature:1570701-1570748:1:exon
so has part: feature:1570906-1570970:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1560740-1560893:1:exon

position:1560893:1
position: 1560893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1560970-1561207:1:exon

position:1560970:1
position: 1560970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1561207:1
position: 1561207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1563145-1563187:1:exon

position:1563145:1
position: 1563145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1563187:1
position: 1563187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1563660-1563727:1:exon

position:1563660:1
position: 1563660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1563727:1
position: 1563727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1564108-1564216:1:exon

position:1564108:1
position: 1564108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1564216:1
position: 1564216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1565008-1565110:1:exon

position:1565008:1
position: 1565008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1565110:1
position: 1565110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1565772-1565870:1:exon

position:1565772:1
position: 1565772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1565870:1
position: 1565870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1566380-1566491:1:exon

position:1566380:1
position: 1566380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1566491:1
position: 1566491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1566960-1567016:1:exon

position:1566960:1
position: 1566960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1567016:1
position: 1567016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1567520-1567676:1:exon

position:1567520:1
position: 1567520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1567676:1
position: 1567676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1568829-1568926:1:exon

position:1568829:1
position: 1568829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1568926:1
position: 1568926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1570216-1570328:1:exon

position:1570216:1
position: 1570216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1570328:1
position: 1570328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1570701-1570748:1:exon

position:1570701:1
position: 1570701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1570748:1
position: 1570748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1570906-1570970:1:exon

position:1570906:1
position: 1570906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MFSD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: MFSD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: major facilitator superfamily domain-containing protein 1
translation: MAEEQRALLGADGAEGGGGSPGPPRALPAACDPRRLPHRLLVLALMCFLGFGSYFCYDNPAALQTQVQRVSRCQGALKNTDGEILCGHGLTGQRGRAARRHRGDGVWDLGRNCSLGGWAGSARGAPGSLAVLGTVIFSSFVCVGQVVFALGALFNTFWLMEVGRFVFGIGGESLAVAQNTYAVSWFKGKELNLVFGLQLSMARIGSTVNMNIMGWIYSRVQDLLGYAGPSTLGLALLIGGVTCLFSLSCALILAYLDRRAEKLLCKEQGKTGEVIKLTDVKDFSLSLWLIFVICVCYYAAVFPFIGLGKVFFIEKFQFSPQEASAINSIVYIISAPMSPVFGLLVDKVGKNIIWVLCAVVTTLASHIMLAFTFWNPWIAMCLLGVAYSLLACALWPMVAFVVPEHQLGTAYGFMQSIQNLGLAVIAIAAGMILDTRGYLFLEVFFSACVCLSLIAVVMLYFVNHLTGGDLNWSAKKRAKVQKAAASE
SIO_010081: MFSD1
subclass of: SO_0000673
so part of: MFSD1
location: join(1560740..1560893,1560970..1561207,1563145..1563187,1563660..1563727,1564108..1564216,1565008..1565110,1565772..1565870,1566380..1566491,1566960..1567016,1567520..1567676,1568829..1568926,1570216..1570328,1570701..1570748,1570906..1570970)
location: region:1560740-1570970:1
so has part: feature:1560740-1560893:1:exon
so has part: feature:1560970-1561207:1:exon
so has part: feature:1563145-1563187:1:exon
so has part: feature:1563660-1563727:1:exon
so has part: feature:1564108-1564216:1:exon
so has part: feature:1565008-1565110:1:exon
so has part: feature:1565772-1565870:1:exon
so has part: feature:1566380-1566491:1:exon
so has part: feature:1566960-1567016:1:exon
so has part: feature:1567520-1567676:1:exon
so has part: feature:1568829-1568926:1:exon
so has part: feature:1570216-1570328:1:exon
so has part: feature:1570701-1570748:1:exon
so has part: feature:1570906-1570970:1:exon

XP_021397379.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1560740-1560893:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1560970-1561207:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1563145-1563187:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1563660-1563727:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1564108-1564216:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1565008-1565110:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1565772-1565870:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1566380-1566491:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1566960-1567016:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1567520-1567676:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1568829-1568926:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1570216-1570328:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1570701-1570748:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1570906-1570970:1:exon

IQCJ
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: IQCJ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1598011..1622110
location: region:1598011-1622110:1
so has part: feature:1598011-1622110:1:exon
subclass of: SO_0000010

110476608
type: Gene
SIO_000068: ncbigene

position:1598011:1
position: 1598011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1622110:1
position: 1622110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1598011-1622110:1:exon

IQCJ
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: IQCJ
product: IQ motif containing J
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021541703.2
SIO_010081: IQCJ
subclass of: SO_0000673
so part of: IQCJ
location: join(1598011..1598315,1613178..1613242,1614084..1614164,1616858..1617056,1622081..1622110)
location: region:1598011-1622110:1
so has part: feature:1598011-1598315:1:exon
so has part: feature:1613178-1613242:1:exon
so has part: feature:1614084-1614164:1:exon
so has part: feature:1616858-1617056:1:exon
so has part: feature:1622081-1622110:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1598011-1598315:1:exon

position:1598315:1
position: 1598315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1613178-1613242:1:exon

position:1613178:1
position: 1613178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1613242:1
position: 1613242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1614084-1614164:1:exon

position:1614084:1
position: 1614084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1614164:1
position: 1614164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1616858-1617056:1:exon

position:1616858:1
position: 1616858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1617056:1
position: 1617056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1622081-1622110:1:exon

position:1622081:1
position: 1622081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IQCJ
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: IQCJ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IQ domain-containing protein J
translation: MRLEELRRLQHTLEQVNDGKDSLQSHQLAMDEENNIQEYPINLQPLESKVKIIQRARPEHLQHQDLSPSPELRDKESLSSMSSMSSMSSMSPRSPTSPASGKTSRSVSMSTFSDSSIPGQLKAIRKA
SIO_010081: IQCJ
subclass of: SO_0000673
so part of: IQCJ
location: join(1598307..1598315,1613178..1613242,1614084..1614164,1616858..1617056,1622081..1622110)
location: region:1598307-1622110:1
so has part: feature:1598307-1598315:1:exon
so has part: feature:1613178-1613242:1:exon
so has part: feature:1614084-1614164:1:exon
so has part: feature:1616858-1617056:1:exon
so has part: feature:1622081-1622110:1:exon

XP_021397378.1
type: Protein
SIO_000068: ncbiprotein

position:1598307:1
position: 1598307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1598307-1598315:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1613178-1613242:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1614084-1614164:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1616858-1617056:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1622081-1622110:1:exon

LOC110476621
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110476621
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1687554..1698135
location: region:1687554-1698135:1
so has part: feature:1687554-1698135:1:exon
subclass of: SO_0000010

110476621
type: Gene
SIO_000068: ncbigene

position:1687554:1
position: 1687554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1698135:1
position: 1698135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1687554-1698135:1:exon

LOC110476621
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110476621
product: schwannomin-interacting protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021541720.2
SIO_010081: LOC110476621
subclass of: SO_0000673
so part of: LOC110476621
location: join(1687554..1687781,1692330..1692448,1695313..1695430,1696269..1696466,1697986..1698135)
location: region:1687554-1698135:1
so has part: feature:1687554-1687781:1:exon
so has part: feature:1692330-1692448:1:exon
so has part: feature:1695313-1695430:1:exon
so has part: feature:1696269-1696466:1:exon
so has part: feature:1697986-1698135:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1687554-1687781:1:exon

position:1687781:1
position: 1687781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1692330-1692448:1:exon

position:1692330:1
position: 1692330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1692448:1
position: 1692448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1695313-1695430:1:exon

position:1695313:1
position: 1695313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1695430:1
position: 1695430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1696269-1696466:1:exon

position:1696269:1
position: 1696269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1696466:1
position: 1696466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1697986-1698135:1:exon

position:1697986:1
position: 1697986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110476621
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110476621
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: schwannomin-interacting protein 1
translation: MSRERGDGMGDILRKAAPPPAEGSYKKAQKNERESIRQKLALGSFFDDGPGLYTSCSKSGKPSLSSRLQSGMNLQICFVNDSGSDKDSDGDDSRTETSLDTPLSPMSKQSSSYSDRDTTEEESESLDDMDFLSRQKKLQAEAKMALAMAKPMAKMQVEVEKQNRKKSPVADLLPHMPHISECLMKRSLKPTDLRDMTIGQLQVIVNDLHSQIESKR
SIO_010081: LOC110476621
subclass of: SO_0000673
so part of: LOC110476621
location: join(1687701..1687781,1692330..1692448,1695313..1695430,1696269..1696466,1697986..1698120)
location: region:1687701-1698120:1
so has part: feature:1687701-1687781:1:exon
so has part: feature:1692330-1692448:1:exon
so has part: feature:1695313-1695430:1:exon
so has part: feature:1696269-1696466:1:exon
so has part: feature:1697986-1698120:1:exon

XP_021397395.1
type: Protein
SIO_000068: ncbiprotein

position:1687701:1
position: 1687701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1698120:1
position: 1698120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1687701-1687781:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1692330-1692448:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1695313-1695430:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1696269-1696466:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1697986-1698120:1:exon

IL12A
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: IL12A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1716011..1719767
location: region:1716011-1719767:1
so has part: feature:1716011-1719767:1:exon
subclass of: SO_0000010

110476606
type: Gene
SIO_000068: ncbigene

position:1716011:1
position: 1716011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1719767:1
position: 1719767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1716011-1719767:1:exon

IL12A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: IL12A
product: interleukin 12A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 33% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031505678.1
SIO_010081: IL12A
subclass of: SO_0000673
so part of: IL12A
location: join(1716011..1716079,1716678..1716830,1717269..1717310,1717419..1717523,1719029..1719114,1719680..1719767)
location: region:1716011-1719767:1
so has part: feature:1716011-1716079:1:exon
so has part: feature:1716678-1716830:1:exon
so has part: feature:1717269-1717310:1:exon
so has part: feature:1717419-1717523:1:exon
so has part: feature:1719029-1719114:1:exon
so has part: feature:1719680-1719767:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1716011-1716079:1:exon

position:1716079:1
position: 1716079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1716678-1716830:1:exon

position:1716678:1
position: 1716678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1716830:1
position: 1716830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1717269-1717310:1:exon

position:1717269:1
position: 1717269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1717310:1
position: 1717310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1717419-1717523:1:exon

position:1717419:1
position: 1717419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1717523:1
position: 1717523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1719029-1719114:1:exon

position:1719029:1
position: 1719029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1719114:1
position: 1719114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1719680-1719767:1:exon

position:1719680:1
position: 1719680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IL12A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: IL12A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-12 subunit alpha
translation: MGQWWHSGKQEWGSGGTQEGRDEKLPSEGPVFNSLFTQESNTLGFECTLEEVDVQDITENRTNTLRACTAEDAGPGNCPTLEKSTFDEGKCLQGISEDVRAYRAQLSSLPDPQLLAALDGMMEVLGSSTGQDPEAPLGLGPPGSSGLGSFQSRLRLCGVLQALRIRSVTICRMLSFLSSP
SIO_010081: IL12A
subclass of: SO_0000673
so part of: IL12A
location: join(1716011..1716079,1716678..1716830,1717269..1717310,1717419..1717523,1719029..1719114,1719680..1719767)
location: region:1716011-1719767:1
so has part: feature:1716011-1716079:1:exon
so has part: feature:1716678-1716830:1:exon
so has part: feature:1717269-1717310:1:exon
so has part: feature:1717419-1717523:1:exon
so has part: feature:1719029-1719114:1:exon
so has part: feature:1719680-1719767:1:exon

XP_031361538.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1716011-1716079:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1716678-1716830:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1717269-1717310:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1717419-1717523:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1719029-1719114:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1719680-1719767:1:exon

LOC110476604
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110476604
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1731342..1744398)
location: region:1731342-1744398:-1
so has part: feature:1731342-1744398:-1:exon
subclass of: SO_0000010

110476604
type: Gene
SIO_000068: ncbigene

position:1731342:-1
position: 1731342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1744398:-1
position: 1744398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1731342-1744398:-1:exon

LOC110476604
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110476604
product: rRNA biogenesis protein RRP36-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031505607.1
SIO_010081: LOC110476604
subclass of: SO_0000673
so part of: LOC110476604
location: complement(join(1731342..1731478,1731719..1731853,1733206..1733459,1738608..1738657,1738774..1738817,1738921..1738968,1740450..1740500,1740960..1741019,1741857..1741888,1744331..1744398))
location: region:1731342-1744398:-1
so has part: feature:1744331-1744398:-1:exon
so has part: feature:1741857-1741888:-1:exon
so has part: feature:1740960-1741019:-1:exon
so has part: feature:1740450-1740500:-1:exon
so has part: feature:1738921-1738968:-1:exon
so has part: feature:1738774-1738817:-1:exon
so has part: feature:1738608-1738657:-1:exon
so has part: feature:1733206-1733459:-1:exon
so has part: feature:1731719-1731853:-1:exon
so has part: feature:1731342-1731478:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1744331-1744398:-1:exon

position:1744331:-1
position: 1744331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1741857-1741888:-1:exon

position:1741857:-1
position: 1741857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1741888:-1
position: 1741888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1740960-1741019:-1:exon

position:1740960:-1
position: 1740960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1741019:-1
position: 1741019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1740450-1740500:-1:exon

position:1740450:-1
position: 1740450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1740500:-1
position: 1740500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1738921-1738968:-1:exon

position:1738921:-1
position: 1738921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1738968:-1
position: 1738968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1738774-1738817:-1:exon

position:1738774:-1
position: 1738774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1738817:-1
position: 1738817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1738608-1738657:-1:exon

position:1738608:-1
position: 1738608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1738657:-1
position: 1738657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1733206-1733459:-1:exon

position:1733206:-1
position: 1733206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1733459:-1
position: 1733459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1731719-1731853:-1:exon

position:1731719:-1
position: 1731719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1731853:-1
position: 1731853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1731342-1731478:-1:exon

position:1731478:-1
position: 1731478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110476604
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110476604
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC110476604 isoform X1
translation: MSCPAPEPDSGAESLSSDEKEVTPNGLEGSGSGSAEEHPEGEASSEDSSSSSSEEESDEEQEEKESPPYCNESGGSCLLSCEHCRNENDQKEQVTPRRLAGGQFMRRRGRRGLHGAARAGRRRGRRALGRVLLVARQVGGELLVPRGAPDPQPAAAALPRRRHPLQGRGRAPLAVLLGLPGHQQRLLHQGYLKGCKTLEKEICSN
SIO_010081: LOC110476604
subclass of: SO_0000673
so part of: LOC110476604
location: complement(join(1731804..1731853,1733206..1733459,1738608..1738657,1738774..1738817,1738921..1738968,1740450..1740500,1740960..1741019,1741857..1741888,1744331..1744359))
location: region:1731804-1744359:-1
so has part: feature:1744331-1744359:-1:exon
so has part: feature:1741857-1741888:-1:exon
so has part: feature:1740960-1741019:-1:exon
so has part: feature:1740450-1740500:-1:exon
so has part: feature:1738921-1738968:-1:exon
so has part: feature:1738774-1738817:-1:exon
so has part: feature:1738608-1738657:-1:exon
so has part: feature:1733206-1733459:-1:exon
so has part: feature:1731804-1731853:-1:exon

XP_031361467.1
type: Protein
SIO_000068: ncbiprotein

position:1731804:-1
position: 1731804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1744359:-1
position: 1744359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1744331-1744359:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1741857-1741888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1740960-1741019:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1740450-1740500:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1738921-1738968:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1738774-1738817:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1738608-1738657:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1733206-1733459:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1731804-1731853:-1:exon

LOC110476604
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110476604
product: rRNA biogenesis protein RRP36-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021541700.1
SIO_010081: LOC110476604
subclass of: SO_0000673
so part of: LOC110476604
location: complement(join(1737934..1738657,1738774..1738817,1738921..1738968,1740450..1740500,1740960..1741019,1741857..1741888,1744331..1744398))
location: region:1737934-1744398:-1
so has part: feature:1744331-1744398:-1:exon
so has part: feature:1741857-1741888:-1:exon
so has part: feature:1740960-1741019:-1:exon
so has part: feature:1740450-1740500:-1:exon
so has part: feature:1738921-1738968:-1:exon
so has part: feature:1738774-1738817:-1:exon
so has part: feature:1737934-1738657:-1:exon

position:1737934:-1
position: 1737934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1744331-1744398:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1741857-1741888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1740960-1741019:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1740450-1740500:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1738921-1738968:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1738774-1738817:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1737934-1738657:-1:exon

LOC110476604
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110476604
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rRNA biogenesis protein RRP36-like isoform X2
translation: MSCPAPEPDSGAESLSSDEKEVTPNGLEGSGSGSAEEHPEGEASSEDSSSSSSEEESDEEQEEKESPPYCNESGGSCLLSCEHCRNENDQKEQVTPRRLAGGQFMYGFL
SIO_010081: LOC110476604
subclass of: SO_0000673
so part of: LOC110476604
location: complement(join(1738592..1738657,1738774..1738817,1738921..1738968,1740450..1740500,1740960..1741019,1741857..1741888,1744331..1744359))
location: region:1738592-1744359:-1
so has part: feature:1744331-1744359:-1:exon
so has part: feature:1741857-1741888:-1:exon
so has part: feature:1740960-1741019:-1:exon
so has part: feature:1740450-1740500:-1:exon
so has part: feature:1738921-1738968:-1:exon
so has part: feature:1738774-1738817:-1:exon
so has part: feature:1738592-1738657:-1:exon

XP_021397375.1
type: Protein
SIO_000068: ncbiprotein

position:1738592:-1
position: 1738592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1744331-1744359:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1741857-1741888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1740960-1741019:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1740450-1740500:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1738921-1738968:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1738774-1738817:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1738592-1738657:-1:exon

IFT80
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: IFT80
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1773739..1807551)
location: region:1773739-1807551:-1
so has part: feature:1773739-1807551:-1:exon
subclass of: SO_0000010

110476620
type: Gene
SIO_000068: ncbigene

position:1773739:-1
position: 1773739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1807551:-1
position: 1807551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1773739-1807551:-1:exon

IFT80
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: IFT80
product: intraflagellar transport 80, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021541719.2
SIO_010081: IFT80
subclass of: SO_0000673
so part of: IFT80
location: complement(join(1773739..1775681,1777955..1778078,1779127..1779299,1780378..1780467,1784083..1784254,1784624..1784771,1785139..1785274,1785687..1785751,1786342..1786505,1787144..1787218,1788468..1788586,1790063..1790242,1794229..1794366,1796086..1796175,1796503..1796612,1800192..1800260,1802034..1802144,1805308..1805529,1806119..1806195,1807455..1807551))
location: region:1773739-1807551:-1
so has part: feature:1807455-1807551:-1:exon
so has part: feature:1806119-1806195:-1:exon
so has part: feature:1805308-1805529:-1:exon
so has part: feature:1802034-1802144:-1:exon
so has part: feature:1800192-1800260:-1:exon
so has part: feature:1796503-1796612:-1:exon
so has part: feature:1796086-1796175:-1:exon
so has part: feature:1794229-1794366:-1:exon
so has part: feature:1790063-1790242:-1:exon
so has part: feature:1788468-1788586:-1:exon
so has part: feature:1787144-1787218:-1:exon
so has part: feature:1786342-1786505:-1:exon
so has part: feature:1785687-1785751:-1:exon
so has part: feature:1785139-1785274:-1:exon
so has part: feature:1784624-1784771:-1:exon
so has part: feature:1784083-1784254:-1:exon
so has part: feature:1780378-1780467:-1:exon
so has part: feature:1779127-1779299:-1:exon
so has part: feature:1777955-1778078:-1:exon
so has part: feature:1773739-1775681:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1807455-1807551:-1:exon

position:1807455:-1
position: 1807455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1806119-1806195:-1:exon

position:1806119:-1
position: 1806119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1806195:-1
position: 1806195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1805308-1805529:-1:exon

position:1805308:-1
position: 1805308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1805529:-1
position: 1805529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1802034-1802144:-1:exon

position:1802034:-1
position: 1802034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1802144:-1
position: 1802144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1800192-1800260:-1:exon

position:1800192:-1
position: 1800192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1800260:-1
position: 1800260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1796503-1796612:-1:exon

position:1796503:-1
position: 1796503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1796612:-1
position: 1796612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1796086-1796175:-1:exon

position:1796086:-1
position: 1796086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1796175:-1
position: 1796175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1794229-1794366:-1:exon

position:1794229:-1
position: 1794229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1794366:-1
position: 1794366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1790063-1790242:-1:exon

position:1790063:-1
position: 1790063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1790242:-1
position: 1790242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1788468-1788586:-1:exon

position:1788468:-1
position: 1788468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1788586:-1
position: 1788586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1787144-1787218:-1:exon

position:1787144:-1
position: 1787144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1787218:-1
position: 1787218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1786342-1786505:-1:exon

position:1786342:-1
position: 1786342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1786505:-1
position: 1786505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1785687-1785751:-1:exon

position:1785687:-1
position: 1785687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1785751:-1
position: 1785751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1785139-1785274:-1:exon

position:1785139:-1
position: 1785139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1785274:-1
position: 1785274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1784624-1784771:-1:exon

position:1784624:-1
position: 1784624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1784771:-1
position: 1784771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1784083-1784254:-1:exon

position:1784083:-1
position: 1784083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1784254:-1
position: 1784254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1780378-1780467:-1:exon

position:1780378:-1
position: 1780378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1780467:-1
position: 1780467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1779127-1779299:-1:exon

position:1779127:-1
position: 1779127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1779299:-1
position: 1779299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1777955-1778078:-1:exon

position:1777955:-1
position: 1777955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1778078:-1
position: 1778078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1773739-1775681:-1:exon

position:1775681:-1
position: 1775681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IFT80
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: IFT80
product: intraflagellar transport 80, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021541718.2
SIO_010081: IFT80
subclass of: SO_0000673
so part of: IFT80
location: complement(join(1773739..1775681,1777955..1778078,1779127..1779299,1780378..1780467,1782682..1782699,1784083..1784254,1784624..1784771,1785139..1785274,1785687..1785751,1786342..1786505,1787144..1787218,1788468..1788586,1790063..1790242,1794229..1794366,1796086..1796175,1796503..1796612,1800192..1800260,1802034..1802144,1805308..1805529,1806119..1806195,1807455..1807551))
location: region:1773739-1807551:-1
so has part: feature:1807455-1807551:-1:exon
so has part: feature:1806119-1806195:-1:exon
so has part: feature:1805308-1805529:-1:exon
so has part: feature:1802034-1802144:-1:exon
so has part: feature:1800192-1800260:-1:exon
so has part: feature:1796503-1796612:-1:exon
so has part: feature:1796086-1796175:-1:exon
so has part: feature:1794229-1794366:-1:exon
so has part: feature:1790063-1790242:-1:exon
so has part: feature:1788468-1788586:-1:exon
so has part: feature:1787144-1787218:-1:exon
so has part: feature:1786342-1786505:-1:exon
so has part: feature:1785687-1785751:-1:exon
so has part: feature:1785139-1785274:-1:exon
so has part: feature:1784624-1784771:-1:exon
so has part: feature:1784083-1784254:-1:exon
so has part: feature:1782682-1782699:-1:exon
so has part: feature:1780378-1780467:-1:exon
so has part: feature:1779127-1779299:-1:exon
so has part: feature:1777955-1778078:-1:exon
so has part: feature:1773739-1775681:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1807455-1807551:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1806119-1806195:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1805308-1805529:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1802034-1802144:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1800192-1800260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1796503-1796612:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1796086-1796175:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1794229-1794366:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1790063-1790242:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1788468-1788586:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1787144-1787218:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1786342-1786505:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1785687-1785751:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1785139-1785274:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1784624-1784771:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1784083-1784254:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1782682-1782699:-1:exon

position:1782682:-1
position: 1782682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1782699:-1
position: 1782699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1780378-1780467:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1779127-1779299:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1777955-1778078:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1773739-1775681:-1:exon

IFT80
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: IFT80
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 80 homolog isoform X2
translation: MRLKTSLLKEPKHKDLVSCVGWTTADELYSCSDDHQILKWNPVTCETTRVLKLPDDVYPIDLHWFPRGIGGKKQSQAESFVLTSSDGKFHLISKLGRVEKSVEAHCGAVLAGRWNYEGTALVTVGEDGQVKIWSKTGMLRSTLAQQGSPVYSVSWAPDSDKVLYTSGQQLIIKPLQPNAKVLQWKAHDGLILKSDWNSVNDLILSAGEDCRYKVWDSFGRALYNSQPHEYPITSIAWALDGEFFAVGSFNTLRLCDKTGWSHALEKPSTGSIFGISWSIDGTQLAGACANGQVIFAHLLEQHWEWQNFLITLIKRRTMKVHNVINEAVDLLEFRDRVIKASLNFGYLVVATSLQCYVFSTKNWNTPLIFDLKEGTVSLILQAERHFLLVDGGGLYLYSYEGRLISSPKYPGMRTEILNALTVSLSNDTLAVRDKADEKVIYIFEALSGKPLGDGKPLTHKTEIVEIALDQKGLTSERKIAFIDKNRDLFITSVKRFGKEQKIVKIGTMVQSLAWNDTSNILCGIQDSKFTVWYYPNTVYVDKDLLPKTLYEKDASEFSKAPQILSFVGSQVTIRRADGSLVHLHVSPFPAILHGHASGARWEQGLRLCSFVQDQTLWACLAAMAVASKEMSTAEIAYAAIGEIDKVQYLHSIKELPSKESRLAHVLLFSGSTQEAETLLLQAGLLYQAIQININLYNWERALDLAVKHRTHVDTVLAYRQKFLEDFGKKETNQRFLQYAEGLEVDWNKIKAKIEMEIAKERERAAASAAGRSSVTVQQ
SIO_010081: IFT80
subclass of: SO_0000673
so part of: IFT80
location: complement(join(1775568..1775681,1777955..1778078,1779127..1779299,1780378..1780467,1784083..1784254,1784624..1784771,1785139..1785274,1785687..1785751,1786342..1786505,1787144..1787218,1788468..1788586,1790063..1790242,1794229..1794366,1796086..1796175,1796503..1796612,1800192..1800260,1802034..1802144,1805308..1805529,1806119..1806155))
location: region:1775568-1806155:-1
so has part: feature:1806119-1806155:-1:exon
so has part: feature:1805308-1805529:-1:exon
so has part: feature:1802034-1802144:-1:exon
so has part: feature:1800192-1800260:-1:exon
so has part: feature:1796503-1796612:-1:exon
so has part: feature:1796086-1796175:-1:exon
so has part: feature:1794229-1794366:-1:exon
so has part: feature:1790063-1790242:-1:exon
so has part: feature:1788468-1788586:-1:exon
so has part: feature:1787144-1787218:-1:exon
so has part: feature:1786342-1786505:-1:exon
so has part: feature:1785687-1785751:-1:exon
so has part: feature:1785139-1785274:-1:exon
so has part: feature:1784624-1784771:-1:exon
so has part: feature:1784083-1784254:-1:exon
so has part: feature:1780378-1780467:-1:exon
so has part: feature:1779127-1779299:-1:exon
so has part: feature:1777955-1778078:-1:exon
so has part: feature:1775568-1775681:-1:exon

XP_021397394.1
type: Protein
SIO_000068: ncbiprotein

position:1775568:-1
position: 1775568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1806155:-1
position: 1806155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1806119-1806155:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1805308-1805529:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1802034-1802144:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1800192-1800260:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1796503-1796612:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1796086-1796175:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1794229-1794366:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1790063-1790242:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1788468-1788586:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1787144-1787218:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1786342-1786505:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1785687-1785751:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1785139-1785274:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1784624-1784771:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1784083-1784254:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1780378-1780467:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1779127-1779299:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1777955-1778078:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1775568-1775681:-1:exon

IFT80
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: IFT80
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 80 homolog isoform X1
translation: MRLKTSLLKEPKHKDLVSCVGWTTADELYSCSDDHQILKWNPVTCETTRVLKLPDDVYPIDLHWFPRGIGGKKQSQAESFVLTSSDGKFHLISKLGRVEKSVEAHCGAVLAGRWNYEGTALVTVGEDGQVKIWSKTGMLRSTLAQQGSPVYSVSWAPDSDKVLYTSGQQLIIKPLQPNAKVLQWKAHDGLILKSDWNSVNDLILSAGEDCRYKVWDSFGRALYNSQPHEYPITSIAWALDGEFFAVGSFNTLRLCDKTGWSHALEKPSTGSIFGISWSIDGTQLAGACANGQVIFAHLLEQHWEWQNFLITLIKRRTMKVHNVINEAVDLLEFRDRVIKASLNFGYLVVATSLQCYVFSTKNWNTPLIFDLKEGTVSLILQAERHFLLVDGGGLYLYSYEGRLISSPKYPGMRTEILNALTVSLSNDTLAVRDKADEKVIYIFEALSGKPLGDGKPLTHKTEIVEIALDQKGLTSERKIAFIDKNRDLFITSVKRFGKEQKIVKIGTMVQSLAWNDTSNILCGIQDSKFTVWYYPNTVYVDKDLLPKTLYEKDASEFSKAPQILSFVGSQVTIRRADGSLVHLHVSPFPAILHGHASGARWEQGLRLCSFVQTTGADEDQTLWACLAAMAVASKEMSTAEIAYAAIGEIDKVQYLHSIKELPSKESRLAHVLLFSGSTQEAETLLLQAGLLYQAIQININLYNWERALDLAVKHRTHVDTVLAYRQKFLEDFGKKETNQRFLQYAEGLEVDWNKIKAKIEMEIAKERERAAASAAGRSSVTVQQ
SIO_010081: IFT80
subclass of: SO_0000673
so part of: IFT80
location: complement(join(1775568..1775681,1777955..1778078,1779127..1779299,1780378..1780467,1782682..1782699,1784083..1784254,1784624..1784771,1785139..1785274,1785687..1785751,1786342..1786505,1787144..1787218,1788468..1788586,1790063..1790242,1794229..1794366,1796086..1796175,1796503..1796612,1800192..1800260,1802034..1802144,1805308..1805529,1806119..1806155))
location: region:1775568-1806155:-1
so has part: feature:1806119-1806155:-1:exon
so has part: feature:1805308-1805529:-1:exon
so has part: feature:1802034-1802144:-1:exon
so has part: feature:1800192-1800260:-1:exon
so has part: feature:1796503-1796612:-1:exon
so has part: feature:1796086-1796175:-1:exon
so has part: feature:1794229-1794366:-1:exon
so has part: feature:1790063-1790242:-1:exon
so has part: feature:1788468-1788586:-1:exon
so has part: feature:1787144-1787218:-1:exon
so has part: feature:1786342-1786505:-1:exon
so has part: feature:1785687-1785751:-1:exon
so has part: feature:1785139-1785274:-1:exon
so has part: feature:1784624-1784771:-1:exon
so has part: feature:1784083-1784254:-1:exon
so has part: feature:1782682-1782699:-1:exon
so has part: feature:1780378-1780467:-1:exon
so has part: feature:1779127-1779299:-1:exon
so has part: feature:1777955-1778078:-1:exon
so has part: feature:1775568-1775681:-1:exon

XP_021397393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1806119-1806155:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1805308-1805529:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1802034-1802144:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1800192-1800260:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1796503-1796612:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1796086-1796175:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1794229-1794366:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1790063-1790242:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1788468-1788586:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1787144-1787218:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1786342-1786505:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1785687-1785751:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1785139-1785274:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1784624-1784771:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1784083-1784254:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1782682-1782699:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1780378-1780467:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1779127-1779299:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1777955-1778078:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1775568-1775681:-1:exon

SMC4
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SMC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1808239..1836773
location: region:1808239-1836773:1
so has part: feature:1808239-1836773:1:exon
subclass of: SO_0000010

110476619
type: Gene
SIO_000068: ncbigene

position:1808239:1
position: 1808239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1836773:1
position: 1836773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1808239-1836773:1:exon

SMC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SMC4
product: structural maintenance of chromosomes 4
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021541717.2
SIO_010081: SMC4
subclass of: SO_0000673
so part of: SMC4
location: join(1808239..1808338,1810497..1810692,1811774..1811952,1812504..1812695,1814242..1814418,1824082..1824246,1825474..1825601,1825819..1825959,1826681..1826831,1827135..1827299,1828032..1828265,1828816..1829001,1829492..1829653,1829804..1830029,1830126..1830205,1830800..1830952,1831055..1831181,1832025..1832214,1832715..1832859,1833406..1833579,1834031..1834213,1834765..1834997,1835396..1835579,1836149..1836344,1836732..1836773)
location: region:1808239-1836773:1
so has part: feature:1808239-1808338:1:exon
so has part: feature:1810497-1810692:1:exon
so has part: feature:1811774-1811952:1:exon
so has part: feature:1812504-1812695:1:exon
so has part: feature:1814242-1814418:1:exon
so has part: feature:1824082-1824246:1:exon
so has part: feature:1825474-1825601:1:exon
so has part: feature:1825819-1825959:1:exon
so has part: feature:1826681-1826831:1:exon
so has part: feature:1827135-1827299:1:exon
so has part: feature:1828032-1828265:1:exon
so has part: feature:1828816-1829001:1:exon
so has part: feature:1829492-1829653:1:exon
so has part: feature:1829804-1830029:1:exon
so has part: feature:1830126-1830205:1:exon
so has part: feature:1830800-1830952:1:exon
so has part: feature:1831055-1831181:1:exon
so has part: feature:1832025-1832214:1:exon
so has part: feature:1832715-1832859:1:exon
so has part: feature:1833406-1833579:1:exon
so has part: feature:1834031-1834213:1:exon
so has part: feature:1834765-1834997:1:exon
so has part: feature:1835396-1835579:1:exon
so has part: feature:1836149-1836344:1:exon
so has part: feature:1836732-1836773:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1808239-1808338:1:exon

position:1808338:1
position: 1808338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1810497-1810692:1:exon

position:1810497:1
position: 1810497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1810692:1
position: 1810692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1811774-1811952:1:exon

position:1811774:1
position: 1811774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1811952:1
position: 1811952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1812504-1812695:1:exon

position:1812504:1
position: 1812504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1812695:1
position: 1812695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1814242-1814418:1:exon

position:1814242:1
position: 1814242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1814418:1
position: 1814418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1824082-1824246:1:exon

position:1824082:1
position: 1824082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1824246:1
position: 1824246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1825474-1825601:1:exon

position:1825474:1
position: 1825474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1825601:1
position: 1825601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1825819-1825959:1:exon

position:1825819:1
position: 1825819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1825959:1
position: 1825959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1826681-1826831:1:exon

position:1826681:1
position: 1826681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1826831:1
position: 1826831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1827135-1827299:1:exon

position:1827135:1
position: 1827135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1827299:1
position: 1827299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1828032-1828265:1:exon

position:1828032:1
position: 1828032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1828265:1
position: 1828265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1828816-1829001:1:exon

position:1828816:1
position: 1828816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1829001:1
position: 1829001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1829492-1829653:1:exon

position:1829492:1
position: 1829492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1829653:1
position: 1829653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1829804-1830029:1:exon

position:1829804:1
position: 1829804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1830029:1
position: 1830029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1830126-1830205:1:exon

position:1830126:1
position: 1830126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1830205:1
position: 1830205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1830800-1830952:1:exon

position:1830800:1
position: 1830800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1830952:1
position: 1830952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1831055-1831181:1:exon

position:1831055:1
position: 1831055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1831181:1
position: 1831181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1832025-1832214:1:exon

position:1832025:1
position: 1832025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1832214:1
position: 1832214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1832715-1832859:1:exon

position:1832715:1
position: 1832715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1832859:1
position: 1832859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1833406-1833579:1:exon

position:1833406:1
position: 1833406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1833579:1
position: 1833579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1834031-1834213:1:exon

position:1834031:1
position: 1834031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1834213:1
position: 1834213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1834765-1834997:1:exon

position:1834765:1
position: 1834765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1834997:1
position: 1834997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1835396-1835579:1:exon

position:1835396:1
position: 1835396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1835579:1
position: 1835579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1836149-1836344:1:exon

position:1836149:1
position: 1836149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1836344:1
position: 1836344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1836732-1836773:1:exon

position:1836732:1
position: 1836732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SMC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SMC4
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 4
translation: MEGEQPTGTVPRKSTKTSTAARRKGREPLEESSTDMEVEDEGTREPDKEPPQAASDEVVDNRSLEEILGSITPPPPPAMTSEPGAPRLMITHIVNQNFKSYAGEQILGPFHKRFSCIIGPNGSGKSNIIDSLLFVFGYRAQKIRSKKLSVLIHNSDEHENIQSCSVEVHFQKITDKEGDDYEVIPDSKFYVSRTAYRDNSSIYYINGKKKTFRDVGLLLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDLIGSARLKEPIQTLCRRVELLNERRGEKLNRVKMVEKEKDALEEDKNKAIEFLCLENQIFKEKNQLCQYYIHDLKKRISDLEMQKEKVNEETKSVNEKSSKLAEETKTKNKTLKELEKKSNKITQFIEEKKEKFTQLDLQDVKVRENLKHTKSKAKKLEKQLQKDKEKVEELRNIPSVSTKAIEDATAKRDQLTKAKDKEEAKLRQVLASLQEDTKGIQKEKEGKEQELMEFSKEVTEARANMEIAQSELELYMSKYNSALAQLSQAQEALESTSNTLKERKAAIRDIAEKLPQAEQQLREKENAVEKLEKEESNTKDLVRNLRLKVEEAKSSLAQSRSRGKVLEALLQQKKCGNIPGIYGRLGDLGAIDDKYDVAISSSCAALDHILVDNIDTAQICVNFLKAGGIGAATFIALDKMDVWEKKMQKIPTPENVPRLFDLVRMEDPRFRVAFYFALRDTLVAKNLEDATRIAFEKEQRWRVVTLQGQIIEVSGTMTGGGGKVMKGRMGSSVVIDVSEEEISKMESQLQRDSKRAVQCQEEKSQLEEDIRKLQVDIREMRNTLEKYTATLQGFSEQEIALKNQIKELEANVAAAAPDKTKQKELEKALDGYKKDYGRVAEQAGKLEEEVKRLHQLIMDTNNQKLKAQQDKIDKIDKEIDECSSAITKAQVAAKSADRNLKKSEEALQRTQKEMEENEKEMKNLTAELTALEEKATEVMNECRQAEEALPAVQEEQKKLFQEMKTIQDAEHALQSEALSIKLKIEQIDSHISTHQGKVKYWQKEISKLSLHDIEGEAPEELRVLSQEELEALQEPDVLSKRIALLEAQRHQLRPNLGAIEEYKSKEELYLKHVEELDNITSERDKFREAYEELRKQRLNEFMAGFNVITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEIGDRLIGIYKTQNTTKSVATNPKILALKGLEELGLPLGSVAKHREELWIKAKLASPQQK
SIO_010081: SMC4
subclass of: SO_0000673
so part of: SMC4
location: join(1810536..1810692,1811774..1811952,1812504..1812695,1814242..1814418,1824082..1824246,1825474..1825601,1825819..1825959,1826681..1826831,1827135..1827299,1828032..1828265,1828816..1829001,1829492..1829653,1829804..1830029,1830126..1830205,1830800..1830952,1831055..1831181,1832025..1832214,1832715..1832859,1833406..1833579,1834031..1834213,1834765..1834997,1835396..1835579,1836149..1836344,1836732..1836773)
location: region:1810536-1836773:1
so has part: feature:1810536-1810692:1:exon
so has part: feature:1811774-1811952:1:exon
so has part: feature:1812504-1812695:1:exon
so has part: feature:1814242-1814418:1:exon
so has part: feature:1824082-1824246:1:exon
so has part: feature:1825474-1825601:1:exon
so has part: feature:1825819-1825959:1:exon
so has part: feature:1826681-1826831:1:exon
so has part: feature:1827135-1827299:1:exon
so has part: feature:1828032-1828265:1:exon
so has part: feature:1828816-1829001:1:exon
so has part: feature:1829492-1829653:1:exon
so has part: feature:1829804-1830029:1:exon
so has part: feature:1830126-1830205:1:exon
so has part: feature:1830800-1830952:1:exon
so has part: feature:1831055-1831181:1:exon
so has part: feature:1832025-1832214:1:exon
so has part: feature:1832715-1832859:1:exon
so has part: feature:1833406-1833579:1:exon
so has part: feature:1834031-1834213:1:exon
so has part: feature:1834765-1834997:1:exon
so has part: feature:1835396-1835579:1:exon
so has part: feature:1836149-1836344:1:exon
so has part: feature:1836732-1836773:1:exon

XP_021397392.2
type: Protein
SIO_000068: ncbiprotein

position:1810536:1
position: 1810536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1810536-1810692:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1811774-1811952:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1812504-1812695:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1814242-1814418:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1824082-1824246:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1825474-1825601:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1825819-1825959:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1826681-1826831:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1827135-1827299:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1828032-1828265:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1828816-1829001:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1829492-1829653:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1829804-1830029:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1830126-1830205:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1830800-1830952:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1831055-1831181:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1832025-1832214:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1832715-1832859:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1833406-1833579:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1834031-1834213:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1834765-1834997:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1835396-1835579:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1836149-1836344:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1836732-1836773:1:exon

TRIM59
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TRIM59
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1836611..1838258)
location: region:1836611-1838258:-1
so has part: feature:1836611-1838258:-1:exon
subclass of: SO_0000010

110476618
type: Gene
SIO_000068: ncbigene

position:1836611:-1
position: 1836611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1838258:-1
position: 1838258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1836611-1838258:-1:exon

TRIM59
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TRIM59
product: tripartite motif containing 59
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021541716.1
SIO_010081: TRIM59
subclass of: SO_0000673
so part of: TRIM59
location: complement(1836611..1838258)
location: region:1836611-1838258:-1
so has part: feature:1836611-1838258:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1836611-1838258:-1:exon

TRIM59
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TRIM59
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 59
translation: MERLEEELTCPICCDTFVDPRVLPCSHTFCGPCLRELLQPAAGLSCPSCRAAVAVPAAGIEALPINFALKAVIEKCQQEERAGTGSTGTCGAHPRQPLNIYCLRDRQLVCGLCITVGKHRGHNIDDLQSAYRKARVASGQLLGQLADPCRSEVFLRAERLLQQKAQCQSTLQSDREAVLKYFKELGDVLEDKKAALLSALNELDSRILEKYDPLIEEVEKLKLEEIELKELHLALVMEESPLLFLEKMNELQLRLHTLRLRQLPEPEPVEIYPRMKKVLQYMWSPTEIGQVHRIRTPKLSLARKSCRNRALSALPSLILMLTSLLLLWHKDPYGFLLLLISFAMLWYEEISCDTISAPLAQLWEFLLRIYQHFCTYLQAPMQESAV
SIO_010081: TRIM59
subclass of: SO_0000673
so part of: TRIM59
location: complement(1836913..1838073)
location: region:1836913-1838073:-1
so has part: feature:1836913-1838073:-1:exon

XP_021397391.1
type: Protein
SIO_000068: ncbiprotein

position:1836913:-1
position: 1836913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1838073:-1
position: 1838073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1836913-1838073:-1:exon

KPNA4
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: KPNA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1846193..1857928)
location: region:1846193-1857928:-1
so has part: feature:1846193-1857928:-1:exon
subclass of: SO_0000010

110476617
type: Gene
SIO_000068: ncbigene

position:1846193:-1
position: 1846193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1857928:-1
position: 1857928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1846193-1857928:-1:exon

KPNA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: KPNA4
product: karyopherin subunit alpha 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 21 ESTs, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021541715.1
SIO_010081: KPNA4
subclass of: SO_0000673
so part of: KPNA4
location: complement(join(1846193..1846408,1847358..1847452,1848261..1848423,1849027..1849098,1849696..1849800,1851190..1851318,1852004..1852135,1852976..1853020,1853109..1853278,1854152..1854238,1855866..1855951,1856053..1856148,1856846..1856898,1856981..1857010,1857098..1857187,1857864..1857928))
location: region:1846193-1857928:-1
so has part: feature:1857864-1857928:-1:exon
so has part: feature:1857098-1857187:-1:exon
so has part: feature:1856981-1857010:-1:exon
so has part: feature:1856846-1856898:-1:exon
so has part: feature:1856053-1856148:-1:exon
so has part: feature:1855866-1855951:-1:exon
so has part: feature:1854152-1854238:-1:exon
so has part: feature:1853109-1853278:-1:exon
so has part: feature:1852976-1853020:-1:exon
so has part: feature:1852004-1852135:-1:exon
so has part: feature:1851190-1851318:-1:exon
so has part: feature:1849696-1849800:-1:exon
so has part: feature:1849027-1849098:-1:exon
so has part: feature:1848261-1848423:-1:exon
so has part: feature:1847358-1847452:-1:exon
so has part: feature:1846193-1846408:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1857864-1857928:-1:exon

position:1857864:-1
position: 1857864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1857098-1857187:-1:exon

position:1857098:-1
position: 1857098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1857187:-1
position: 1857187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1856981-1857010:-1:exon

position:1856981:-1
position: 1856981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1857010:-1
position: 1857010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1856846-1856898:-1:exon

position:1856846:-1
position: 1856846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1856898:-1
position: 1856898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1856053-1856148:-1:exon

position:1856053:-1
position: 1856053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1856148:-1
position: 1856148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1855866-1855951:-1:exon

position:1855866:-1
position: 1855866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1855951:-1
position: 1855951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1854152-1854238:-1:exon

position:1854152:-1
position: 1854152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1854238:-1
position: 1854238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1853109-1853278:-1:exon

position:1853109:-1
position: 1853109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1853278:-1
position: 1853278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1852976-1853020:-1:exon

position:1852976:-1
position: 1852976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1853020:-1
position: 1853020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1852004-1852135:-1:exon

position:1852004:-1
position: 1852004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1852135:-1
position: 1852135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1851190-1851318:-1:exon

position:1851190:-1
position: 1851190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1851318:-1
position: 1851318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1849696-1849800:-1:exon

position:1849696:-1
position: 1849696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1849800:-1
position: 1849800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1849027-1849098:-1:exon

position:1849027:-1
position: 1849027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1849098:-1
position: 1849098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1848261-1848423:-1:exon

position:1848261:-1
position: 1848261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1848423:-1
position: 1848423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1847358-1847452:-1:exon

position:1847358:-1
position: 1847358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1847452:-1
position: 1847452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1846193-1846408:-1:exon

position:1846408:-1
position: 1846408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KPNA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: KPNA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: importin subunit alpha-3
translation: MRRQRNEVVVELRKNKRDEHLLKRRNVPHEDICEDSDIDGDFRVQNTSLEAIVQNASSDNQGIQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQTQAVVQSNAVPLFLRLLHSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPSIPITFLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHHTDVNILVDTVWALSYLTDAGNEQIQMVIDSGIVLHLVPLLSHQEVKVQTAALRAVGNIVTGTDEQTQVVLNCEALSHFPALLTHPKEKINKEAVWFLSNITAGNQQQVQAVIDANLVPMIIHLLDKGDFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIPPFCNLLTVKDAQVVQVVLDGLSNILKMAEEEAETIANLIEECGGLEKIEQLQNHENEDIYKLAYEIIDQFFSSDDIDEDPSLVPEAIQGGTFGFNSSANVPAEGFQF
SIO_010081: KPNA4
subclass of: SO_0000673
so part of: KPNA4
location: complement(join(1846310..1846408,1847358..1847452,1848261..1848423,1849027..1849098,1849696..1849800,1851190..1851318,1852004..1852135,1852976..1853020,1853109..1853278,1854152..1854238,1855866..1855951,1856053..1856148,1856846..1856898,1856981..1857010,1857098..1857187,1857864..1857905))
location: region:1846310-1857905:-1
so has part: feature:1857864-1857905:-1:exon
so has part: feature:1857098-1857187:-1:exon
so has part: feature:1856981-1857010:-1:exon
so has part: feature:1856846-1856898:-1:exon
so has part: feature:1856053-1856148:-1:exon
so has part: feature:1855866-1855951:-1:exon
so has part: feature:1854152-1854238:-1:exon
so has part: feature:1853109-1853278:-1:exon
so has part: feature:1852976-1853020:-1:exon
so has part: feature:1852004-1852135:-1:exon
so has part: feature:1851190-1851318:-1:exon
so has part: feature:1849696-1849800:-1:exon
so has part: feature:1849027-1849098:-1:exon
so has part: feature:1848261-1848423:-1:exon
so has part: feature:1847358-1847452:-1:exon
so has part: feature:1846310-1846408:-1:exon

XP_021397390.1
type: Protein
SIO_000068: ncbiprotein

position:1846310:-1
position: 1846310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1857905:-1
position: 1857905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1857864-1857905:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1857098-1857187:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1856981-1857010:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1856846-1856898:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1856053-1856148:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1855866-1855951:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1854152-1854238:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1853109-1853278:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1852976-1853020:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1852004-1852135:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1851190-1851318:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1849696-1849800:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1849027-1849098:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1848261-1848423:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1847358-1847452:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1846310-1846408:-1:exon

LOC116183986
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116183986
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1850603..1850876)
location: region:1850603-1850876:-1
so has part: feature:1850603-1850876:-1:exon
subclass of: SO_0000979

116183986
type: Gene
SIO_000068: ncbigene

position:1850603:-1
position: 1850603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1850876:-1
position: 1850876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1850603-1850876:-1:exon

LOC116183986
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: guide_RNA
gene: LOC116183986
product: small Cajal body-specific RNA 7
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01295
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004148703.1
SIO_010081: LOC116183986
subclass of: SO_0000673
so part of: LOC116183986
location: complement(1850603..1850876)
location: region:1850603-1850876:-1
so has part: feature:1850603-1850876:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1850603-1850876:-1:exon

ARL14
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: ARL14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1886618..1887199)
location: region:1886618-1887199:-1
so has part: feature:1886618-1887199:-1:exon
subclass of: SO_0000010

110476603
type: Gene
SIO_000068: ncbigene

position:1886618:-1
position: 1886618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1887199:-1
position: 1887199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1886618-1887199:-1:exon

ARL14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ARL14
product: ADP ribosylation factor like GTPase 14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021541699.1
SIO_010081: ARL14
subclass of: SO_0000673
so part of: ARL14
location: complement(1886618..1887199)
location: region:1886618-1887199:-1
so has part: feature:1886618-1887199:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1886618-1887199:-1:exon

ARL14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ARL14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor-like protein 14
translation: MGLHNAKPSMKGANIVMLGLDSAGKSTLLYKFRSDDVFVTMPTVGFNVDMIEAGKDFTLTFWDVGGQKNMRELWSSFLEDAGTLLYVVDSSDKRRLEESRREFELILKNESIKNVPVVVLANKQDLPGALNAEEVTRKLKMKKYCSDRNWYVQPCCAITGDGLAEALQRVATFARQYKKSKETFITLKELNSF
SIO_010081: ARL14
subclass of: SO_0000673
so part of: ARL14
location: complement(1886618..1887199)
location: region:1886618-1887199:-1
so has part: feature:1886618-1887199:-1:exon

XP_021397374.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1886618-1887199:-1:exon

B3GALNT1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: B3GALNT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1890614..1897566
location: region:1890614-1897566:1
so has part: feature:1890614-1897566:1:exon
subclass of: SO_0000010

110476616
type: Gene
SIO_000068: ncbigene

position:1890614:1
position: 1890614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1897566:1
position: 1897566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1890614-1897566:1:exon

B3GALNT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: B3GALNT1
product: beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021541713.2
SIO_010081: B3GALNT1
subclass of: SO_0000673
so part of: B3GALNT1
location: join(1890614..1891001,1892824..1893003,1895604..1897566)
location: region:1890614-1897566:1
so has part: feature:1890614-1891001:1:exon
so has part: feature:1892824-1893003:1:exon
so has part: feature:1895604-1897566:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1890614-1891001:1:exon

position:1891001:1
position: 1891001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1892824-1893003:1:exon

position:1892824:1
position: 1892824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1893003:1
position: 1893003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1895604-1897566:1:exon

position:1895604:1
position: 1895604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

B3GALNT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: B3GALNT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-GalNAc:beta-1, 3-N-acetylgalactosaminyltransferase 1
translation: MILDLASALYRRPLKWIFLWLLVFALTTMWYITFSSRAGLENLNPLYFYEHEPVYRRPRPFTLRERPRCADLRPFLVILVASSPGDLKARQAIRITWGSRDSWWGQHILTLFLLGQDTQREDRAAALAVEDESILYGDIIRQDFVDTYDNLTLKTIMAFQWLAEFCSNARFFMKTDADVFINTPNLVKFLLQLNSSENVFTGYPLIENFAYRGFDRKRYISYQEYPFKLYPPYCSGLGYILDGKLALRTYELMGHVKPLKFEDVYVGICVNILQVNITIPEDAEQFFLYKINFDICKYRHLIAVHGLTSSELVQFWQDLSSSTSETCL
SIO_010081: B3GALNT1
subclass of: SO_0000673
so part of: B3GALNT1
location: 1895664..1896650
location: region:1895664-1896650:1
so has part: feature:1895664-1896650:1:exon

XP_021397388.1
type: Protein
SIO_000068: ncbiprotein

position:1895664:1
position: 1895664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1896650:1
position: 1896650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1895664-1896650:1:exon

PPM1L
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: PPM1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1902341..1967938)
location: region:1902341-1967938:-1
so has part: feature:1902341-1967938:-1:exon
subclass of: SO_0000010

110476615
type: Gene
SIO_000068: ncbigene

position:1902341:-1
position: 1902341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1967938:-1
position: 1967938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1902341-1967938:-1:exon

PPM1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PPM1L
product: protein phosphatase, Mg2+/Mn2+ dependent 1L
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021541712.2
SIO_010081: PPM1L
subclass of: SO_0000673
so part of: PPM1L
location: complement(join(1902341..1903640,1905251..1905412,1914263..1914437,1967414..1967938))
location: region:1902341-1967938:-1
so has part: feature:1967414-1967938:-1:exon
so has part: feature:1914263-1914437:-1:exon
so has part: feature:1905251-1905412:-1:exon
so has part: feature:1902341-1903640:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1967414-1967938:-1:exon

position:1967414:-1
position: 1967414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1914263-1914437:-1:exon

position:1914263:-1
position: 1914263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1914437:-1
position: 1914437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1905251-1905412:-1:exon

position:1905251:-1
position: 1905251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1905412:-1
position: 1905412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1902341-1903640:-1:exon

position:1903640:-1
position: 1903640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPM1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PPM1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1L
translation: MIEDTMTLLSLLGRIMRYFLLRPETLFLLCISLALWSYFFHTDEVKTIVKSSRDAVKMVKGKVAKIMQNDRLGGLDVLDAEFSKTWEFKSHNVAVYSIQGRRDHMEDRFEVITDLVNKTHPSIFGIFDGHGGESAAEYVKARLPEVLRQHLQDYERDKENSVLSYHSILEQQILSIDREMLEKLALAYDEAGTTCLIALLSDKELTVANVGDSRGVLCDKDGNAIPLSHDHKPYQLKERKRIKRAGGFISFNGSWRVQGILAMSRSLGDYPLKNLNVVIPDPDILSFDLDKLQPEFMILASDGLWDAFSNEEAVRFIKERLDEPHFGAKSIVLQSFYRGCPDNITVMVVKFRSSSKAEEQQ
SIO_010081: PPM1L
subclass of: SO_0000673
so part of: PPM1L
location: complement(join(1903291..1903640,1905251..1905412,1914263..1914437,1967414..1967812))
location: region:1903291-1967812:-1
so has part: feature:1967414-1967812:-1:exon
so has part: feature:1914263-1914437:-1:exon
so has part: feature:1905251-1905412:-1:exon
so has part: feature:1903291-1903640:-1:exon

XP_021397387.1
type: Protein
SIO_000068: ncbiprotein

position:1903291:-1
position: 1903291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1967812:-1
position: 1967812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1967414-1967812:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1914263-1914437:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1905251-1905412:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1903291-1903640:-1:exon

LOC116183964
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116183964
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1990543..1990807
location: region:1990543-1990807:1
so has part: feature:1990543-1990807:1:exon
subclass of: SO_0000010

116183964
type: Gene
SIO_000068: ncbigene

position:1990543:1
position: 1990543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1990807:1
position: 1990807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1990543-1990807:1:exon

LOC116183964
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC116183964
product: serine palmitoyltransferase small subunit B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 33% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031505670.1
SIO_010081: LOC116183964
subclass of: SO_0000673
so part of: LOC116183964
location: 1990543..1990807
location: region:1990543-1990807:1
so has part: feature:1990543-1990807:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1990543-1990807:1:exon

LOC116183964
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC116183964
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine palmitoyltransferase small subunit B-like
translation: MDVKNTPSYLYWLFCQFELITCSYLMEPWEKVLFYSFNLAMLGLLLYTTYVCLAFHTSSAFQLLCSFLGNPRENSLSVVK
SIO_010081: LOC116183964
subclass of: SO_0000673
so part of: LOC116183964
location: 1990565..1990807
location: region:1990565-1990807:1
so has part: feature:1990565-1990807:1:exon

XP_031361530.1
type: Protein
SIO_000068: ncbiprotein

position:1990565:1
position: 1990565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1990565-1990807:1:exon

NMD3
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: NMD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1995026..2005664)
location: region:1995026-2005664:-1
so has part: feature:1995026-2005664:-1:exon
subclass of: SO_0000010

110476614
type: Gene
SIO_000068: ncbigene

position:1995026:-1
position: 1995026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2005664:-1
position: 2005664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1995026-2005664:-1:exon

NMD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: NMD3
product: NMD3 ribosome export adaptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021541711.2
SIO_010081: NMD3
subclass of: SO_0000673
so part of: NMD3
location: complement(join(1995026..1996347,1998334..1998463,1998902..1998972,1999429..1999535,1999981..2000053,2000672..2000784,2001290..2001435,2002357..2002474,2002678..2002774,2003061..2003139,2003280..2003370,2003866..2003994,2004229..2004309,2004755..2004851,2005354..2005488,2005572..2005664))
location: region:1995026-2005664:-1
so has part: feature:2005572-2005664:-1:exon
so has part: feature:2005354-2005488:-1:exon
so has part: feature:2004755-2004851:-1:exon
so has part: feature:2004229-2004309:-1:exon
so has part: feature:2003866-2003994:-1:exon
so has part: feature:2003280-2003370:-1:exon
so has part: feature:2003061-2003139:-1:exon
so has part: feature:2002678-2002774:-1:exon
so has part: feature:2002357-2002474:-1:exon
so has part: feature:2001290-2001435:-1:exon
so has part: feature:2000672-2000784:-1:exon
so has part: feature:1999981-2000053:-1:exon
so has part: feature:1999429-1999535:-1:exon
so has part: feature:1998902-1998972:-1:exon
so has part: feature:1998334-1998463:-1:exon
so has part: feature:1995026-1996347:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2005572-2005664:-1:exon

position:2005572:-1
position: 2005572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2005354-2005488:-1:exon

position:2005354:-1
position: 2005354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2005488:-1
position: 2005488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2004755-2004851:-1:exon

position:2004755:-1
position: 2004755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2004851:-1
position: 2004851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2004229-2004309:-1:exon

position:2004229:-1
position: 2004229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2004309:-1
position: 2004309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2003866-2003994:-1:exon

position:2003866:-1
position: 2003866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2003994:-1
position: 2003994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2003280-2003370:-1:exon

position:2003280:-1
position: 2003280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2003370:-1
position: 2003370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2003061-2003139:-1:exon

position:2003061:-1
position: 2003061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2003139:-1
position: 2003139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2002678-2002774:-1:exon

position:2002678:-1
position: 2002678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2002774:-1
position: 2002774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2002357-2002474:-1:exon

position:2002357:-1
position: 2002357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2002474:-1
position: 2002474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2001290-2001435:-1:exon

position:2001290:-1
position: 2001290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2001435:-1
position: 2001435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2000672-2000784:-1:exon

position:2000672:-1
position: 2000672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2000784:-1
position: 2000784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1999981-2000053:-1:exon

position:1999981:-1
position: 1999981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2000053:-1
position: 2000053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1999429-1999535:-1:exon

position:1999429:-1
position: 1999429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1999535:-1
position: 1999535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1998902-1998972:-1:exon

position:1998902:-1
position: 1998902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1998972:-1
position: 1998972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1998334-1998463:-1:exon

position:1998334:-1
position: 1998334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1998463:-1
position: 1998463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1995026-1996347:-1:exon

position:1996347:-1
position: 1996347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NMD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: NMD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal export protein NMD3
translation: MEYLPAAAAPAPGHILCCQCGVPIPPNPANMCVGCLRAQVDITEGIPKQGTVHFCKQCERYLQPPGTWIQCALESRELLALCLKKIKASLSKVRLIDAGFIWTEPHSKRIKLKLTVQKEVINGAVLQQVFVVEYIVQSQMCEDCHRIEAKDFWKAVVQVRQKTVHKKTFYYLEQLILKHRLHQNTLRIKEIHDGLDFYYSSKQHAQKMVDFLQSTVPSRSKSSQRLISHDIHSNVYNYKSTFSVEIVPICKDNVVCLSPKLAQSLGNMSQICVCIRVTSTIRLIDPRTLQIADIDGNTYWRHPFNSLFHPKQLEEFIIMDINRVHEKKKGAGAGARSLKHTLAEAWVRKTSELDTDHQYFCCTHLGHILNPGDLVLGFDLANCNLNDEFANKMNPQHIPDVVLIKKSYDRSKRQRRRNWKLKELERDREATDTDDERQYQDFLEDLEEDEAIRKNVNIYRNADIPVESDTDDDGAPRISLAEMLEDLHISQDATGGEGAEMLTENIHGKIRMCLC
SIO_010081: NMD3
subclass of: SO_0000673
so part of: NMD3
location: complement(join(1996311..1996347,1998334..1998463,1998902..1998972,1999429..1999535,1999981..2000053,2000672..2000784,2001290..2001435,2002357..2002474,2002678..2002774,2003061..2003139,2003280..2003370,2003866..2003994,2004229..2004309,2004755..2004851,2005354..2005488,2005572..2005615))
location: region:1996311-2005615:-1
so has part: feature:2005572-2005615:-1:exon
so has part: feature:2005354-2005488:-1:exon
so has part: feature:2004755-2004851:-1:exon
so has part: feature:2004229-2004309:-1:exon
so has part: feature:2003866-2003994:-1:exon
so has part: feature:2003280-2003370:-1:exon
so has part: feature:2003061-2003139:-1:exon
so has part: feature:2002678-2002774:-1:exon
so has part: feature:2002357-2002474:-1:exon
so has part: feature:2001290-2001435:-1:exon
so has part: feature:2000672-2000784:-1:exon
so has part: feature:1999981-2000053:-1:exon
so has part: feature:1999429-1999535:-1:exon
so has part: feature:1998902-1998972:-1:exon
so has part: feature:1998334-1998463:-1:exon
so has part: feature:1996311-1996347:-1:exon

XP_021397386.1
type: Protein
SIO_000068: ncbiprotein

position:1996311:-1
position: 1996311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2005615:-1
position: 2005615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2005572-2005615:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2005354-2005488:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2004755-2004851:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2004229-2004309:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2003866-2003994:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2003280-2003370:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2003061-2003139:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2002678-2002774:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2002357-2002474:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2001290-2001435:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2000672-2000784:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1999981-2000053:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1999429-1999535:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1998902-1998972:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1998334-1998463:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1996311-1996347:-1:exon

LOC110476602
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110476602
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2005748..2007013
location: region:2005748-2007013:1
so has part: feature:2005748-2007013:1:exon
subclass of: SO_0000011

110476602
type: Gene
SIO_000068: ncbigene

position:2005748:1
position: 2005748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2007013:1
position: 2007013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2005748-2007013:1:exon

LOC110476602
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110476602
product: uncharacterized LOC110476602, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004148654.1
SIO_010081: LOC110476602
subclass of: SO_0000673
so part of: LOC110476602
location: join(2005748..2005863,2006789..2007013)
location: region:2005748-2007013:1
so has part: feature:2005748-2005863:1:exon
so has part: feature:2006789-2007013:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2005748-2005863:1:exon

position:2005863:1
position: 2005863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2006789-2007013:1:exon

position:2006789:1
position: 2006789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110476602
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110476602
product: uncharacterized LOC110476602, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_002466450.2
SIO_010081: LOC110476602
subclass of: SO_0000673
so part of: LOC110476602
location: join(2006105..2006221,2006789..2007013)
location: region:2006105-2007013:1
so has part: feature:2006105-2006221:1:exon
so has part: feature:2006789-2007013:1:exon

position:2006105:1
position: 2006105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2006105-2006221:1:exon

position:2006221:1
position: 2006221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2006789-2007013:1:exon

SPTSSB
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SPTSSB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2017022..2029314)
location: region:2017022-2029314:-1
so has part: feature:2017022-2029314:-1:exon
subclass of: SO_0000010

110476612
type: Gene
SIO_000068: ncbigene

position:2017022:-1
position: 2017022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2029314:-1
position: 2029314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2017022-2029314:-1:exon

SPTSSB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SPTSSB
product: serine palmitoyltransferase small subunit B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_021541708.1
SIO_010081: SPTSSB
subclass of: SO_0000673
so part of: SPTSSB
location: complement(join(2017022..2019301,2029272..2029314))
location: region:2017022-2029314:-1
so has part: feature:2029272-2029314:-1:exon
so has part: feature:2017022-2019301:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2029272-2029314:-1:exon

position:2029272:-1
position: 2029272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2017022-2019301:-1:exon

position:2019301:-1
position: 2019301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SPTSSB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SPTSSB
product: serine palmitoyltransferase small subunit B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021541709.1
SIO_010081: SPTSSB
subclass of: SO_0000673
so part of: SPTSSB
location: complement(join(2017022..2019301,2029162..2029194))
location: region:2017022-2029194:-1
so has part: feature:2029162-2029194:-1:exon
so has part: feature:2017022-2019301:-1:exon

position:2029194:-1
position: 2029194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2029162-2029194:-1:exon

position:2029162:-1
position: 2029162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2017022-2019301:-1:exon

SPTSSB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SPTSSB
product: serine palmitoyltransferase small subunit B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021541707.2
SIO_010081: SPTSSB
subclass of: SO_0000673
so part of: SPTSSB
location: complement(join(2017022..2019301,2028478..2028643))
location: region:2017022-2028643:-1
so has part: feature:2028478-2028643:-1:exon
so has part: feature:2017022-2019301:-1:exon

position:2028643:-1
position: 2028643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2028478-2028643:-1:exon

position:2028478:-1
position: 2028478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2017022-2019301:-1:exon

SPTSSB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SPTSSB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine palmitoyltransferase small subunit B
translation: MDVKRVKDYLYWLYYQYQLVTCSYVLEPWEQSMFHTITVTVLAMVVYTAYVFVPIHVRLALQFFSQIFGPQAESAVLN
SIO_010081: SPTSSB
subclass of: SO_0000673
so part of: SPTSSB
location: complement(2019037..2019273)
location: region:2019037-2019273:-1
so has part: feature:2019037-2019273:-1:exon

XP_021397382.1
type: Protein
SIO_000068: ncbiprotein

position:2019037:-1
position: 2019037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2019273:-1
position: 2019273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2019037-2019273:-1:exon

SPTSSB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SPTSSB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine palmitoyltransferase small subunit B
translation: MDVKRVKDYLYWLYYQYQLVTCSYVLEPWEQSMFHTITVTVLAMVVYTAYVFVPIHVRLALQFFSQIFGPQAESAVLN
SIO_010081: SPTSSB
subclass of: SO_0000673
so part of: SPTSSB
location: complement(2019037..2019273)
location: region:2019037-2019273:-1
so has part: feature:2019037-2019273:-1:exon

XP_021397383.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2019037-2019273:-1:exon

SPTSSB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SPTSSB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine palmitoyltransferase small subunit B
translation: MDVKRVKDYLYWLYYQYQLVTCSYVLEPWEQSMFHTITVTVLAMVVYTAYVFVPIHVRLALQFFSQIFGPQAESAVLN
SIO_010081: SPTSSB
subclass of: SO_0000673
so part of: SPTSSB
location: complement(2019037..2019273)
location: region:2019037-2019273:-1
so has part: feature:2019037-2019273:-1:exon

XP_021397384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2019037-2019273:-1:exon

OTOL1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: OTOL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2040159..2044474
location: region:2040159-2044474:1
so has part: feature:2040159-2044474:1:exon
subclass of: SO_0000010

110476624
type: Gene
SIO_000068: ncbigene

position:2040159:1
position: 2040159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2044474:1
position: 2044474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2040159-2044474:1:exon

OTOL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: OTOL1
product: otolin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 7% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021541727.2
SIO_010081: OTOL1
subclass of: SO_0000673
so part of: OTOL1
location: join(2040159..2040477,2042205..2042294,2043390..2043452,2043597..2044474)
location: region:2040159-2044474:1
so has part: feature:2040159-2040477:1:exon
so has part: feature:2042205-2042294:1:exon
so has part: feature:2043390-2043452:1:exon
so has part: feature:2043597-2044474:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2040159-2040477:1:exon

position:2040477:1
position: 2040477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2042205-2042294:1:exon

position:2042205:1
position: 2042205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2042294:1
position: 2042294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2043390-2043452:1:exon

position:2043390:1
position: 2043390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2043452:1
position: 2043452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2043597-2044474:1:exon

position:2043597:1
position: 2043597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OTOL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: OTOL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: otolin-1
translation: MDRGGIWDASSRTILEHLRCASSAVLSRSAAMPSCPAPVPLLLLLAAVPGAAHPPASGPGRTPLPAAPPGAQLPTLFPLENSTLDSAELFFNCCECCPPAGPRGPAGPKGEKGDAGLPGLPGTPGPQGPKGSKGERGEQGERGASGSPGYPGKPGLQGEAGAKGNKGSYGFPGLKGQKGAKGDTCDNGTKGDKGDRGDPGEPGAGGEQGDKGEKGDTGEKGYCGEPGGRGAKGDRGEGGTKGEKGSKGDAGTEGTRGAAGKQGEKGEQGPKGDKGDLGPAGAKGEPGTKGGRGAPGRKGSRGAKGAAGHVPRAPRSAFSAGLSRPFPPPNVPIRFDRVWFNERHDYDPATGKFNCSVPGAYVFSYHVTVRGRPARLSLVASSRRVAKARDTLYGQDIDQASFLTILKLRVGDQVWLEVAKDWNGLYAGAEDDSVFTGFLLYPDGFEVLL
SIO_010081: OTOL1
subclass of: SO_0000673
so part of: OTOL1
location: join(2040159..2040477,2042205..2042294,2043390..2043452,2043597..2044474)
location: region:2040159-2044474:1
so has part: feature:2040159-2040477:1:exon
so has part: feature:2042205-2042294:1:exon
so has part: feature:2043390-2043452:1:exon
so has part: feature:2043597-2044474:1:exon

XP_021397402.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2040159-2040477:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2042205-2042294:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2043390-2043452:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2043597-2044474:1:exon

SI
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SI
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2693104..2736420)
location: region:2693104-2736420:-1
so has part: feature:2693104-2736420:-1:exon
subclass of: SO_0000010

110480372
type: Gene
SIO_000068: ncbigene

position:2693104:-1
position: 2693104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2736420:-1
position: 2736420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2693104-2736420:-1:exon

SI
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SI
product: sucrase-isomaltase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 17% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021548245.1
SIO_010081: SI
subclass of: SO_0000673
so part of: SI
location: complement(join(2693104..2693166,2694337..2694501,2696196..2696245,2697462..2697550,2697760..2697884,2698479..2698535,2698632..2698716,2699224..2699372,2700561..2700677,2700769..2700803,2701322..2701455,2705115..2705253,2706155..2706239,2706839..2706970,2707234..2707296,2707394..2707501,2707606..2707734,2708477..2708602,2708689..2708801,2709199..2709295,2710153..2710321,2711919..2712073,2712886..2713092,2714420..2714569,2715042..2715212,2716475..2716524,2717744..2717832,2718187..2718311,2718682..2718738,2719466..2719550,2719821..2719975,2720394..2720510,2721101..2721272,2721630..2721747,2722339..2722423,2722661..2722774,2723396..2723512,2723670..2723801,2724421..2724546,2725488..2725600,2726257..2726356,2727707..2727878,2729280..2729431,2730095..2730204,2730282..2730402,2734948..2735027,2736300..2736420))
location: region:2693104-2736420:-1
so has part: feature:2736300-2736420:-1:exon
so has part: feature:2734948-2735027:-1:exon
so has part: feature:2730282-2730402:-1:exon
so has part: feature:2730095-2730204:-1:exon
so has part: feature:2729280-2729431:-1:exon
so has part: feature:2727707-2727878:-1:exon
so has part: feature:2726257-2726356:-1:exon
so has part: feature:2725488-2725600:-1:exon
so has part: feature:2724421-2724546:-1:exon
so has part: feature:2723670-2723801:-1:exon
so has part: feature:2723396-2723512:-1:exon
so has part: feature:2722661-2722774:-1:exon
so has part: feature:2722339-2722423:-1:exon
so has part: feature:2721630-2721747:-1:exon
so has part: feature:2721101-2721272:-1:exon
so has part: feature:2720394-2720510:-1:exon
so has part: feature:2719821-2719975:-1:exon
so has part: feature:2719466-2719550:-1:exon
so has part: feature:2718682-2718738:-1:exon
so has part: feature:2718187-2718311:-1:exon
so has part: feature:2717744-2717832:-1:exon
so has part: feature:2716475-2716524:-1:exon
so has part: feature:2715042-2715212:-1:exon
so has part: feature:2714420-2714569:-1:exon
so has part: feature:2712886-2713092:-1:exon
so has part: feature:2711919-2712073:-1:exon
so has part: feature:2710153-2710321:-1:exon
so has part: feature:2709199-2709295:-1:exon
so has part: feature:2708689-2708801:-1:exon
so has part: feature:2708477-2708602:-1:exon
so has part: feature:2707606-2707734:-1:exon
so has part: feature:2707394-2707501:-1:exon
so has part: feature:2707234-2707296:-1:exon
so has part: feature:2706839-2706970:-1:exon
so has part: feature:2706155-2706239:-1:exon
so has part: feature:2705115-2705253:-1:exon
so has part: feature:2701322-2701455:-1:exon
so has part: feature:2700769-2700803:-1:exon
so has part: feature:2700561-2700677:-1:exon
so has part: feature:2699224-2699372:-1:exon
so has part: feature:2698632-2698716:-1:exon
so has part: feature:2698479-2698535:-1:exon
so has part: feature:2697760-2697884:-1:exon
so has part: feature:2697462-2697550:-1:exon
so has part: feature:2696196-2696245:-1:exon
so has part: feature:2694337-2694501:-1:exon
so has part: feature:2693104-2693166:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2736300-2736420:-1:exon

position:2736300:-1
position: 2736300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2734948-2735027:-1:exon

position:2734948:-1
position: 2734948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2735027:-1
position: 2735027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2730282-2730402:-1:exon

position:2730282:-1
position: 2730282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2730402:-1
position: 2730402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2730095-2730204:-1:exon

position:2730095:-1
position: 2730095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2730204:-1
position: 2730204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2729280-2729431:-1:exon

position:2729280:-1
position: 2729280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2729431:-1
position: 2729431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2727707-2727878:-1:exon

position:2727707:-1
position: 2727707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2727878:-1
position: 2727878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2726257-2726356:-1:exon

position:2726257:-1
position: 2726257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2726356:-1
position: 2726356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2725488-2725600:-1:exon

position:2725488:-1
position: 2725488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2725600:-1
position: 2725600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2724421-2724546:-1:exon

position:2724421:-1
position: 2724421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2724546:-1
position: 2724546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2723670-2723801:-1:exon

position:2723670:-1
position: 2723670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2723801:-1
position: 2723801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2723396-2723512:-1:exon

position:2723396:-1
position: 2723396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2723512:-1
position: 2723512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2722661-2722774:-1:exon

position:2722661:-1
position: 2722661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2722774:-1
position: 2722774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2722339-2722423:-1:exon

position:2722339:-1
position: 2722339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2722423:-1
position: 2722423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2721630-2721747:-1:exon

position:2721630:-1
position: 2721630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2721747:-1
position: 2721747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2721101-2721272:-1:exon