Lonchura striata domestica isolate Mets1 chromosome 4A, lonStrDom2, whole genome shotgun sequence.
type: Entry
definition: Lonchura striata domestica isolate Mets1 chromosome 4A, lonStrDom2, whole genome shotgun sequence.
sequence version: NC_042570.1
sequence date: 2019-11-05
sequence: sequence
division: CON
label: NC_042570.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA391487
dblink: SAMN11521339
keyword: WGS
keyword: RefSeq
source: Lonchura striata domestica (Bengalese finch)
organism: Lonchura striata domestica
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM016793.1.\nAssembly name: lonStrDom2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the HHMI/UCSF on 2019/06/05. The\noriginal whole-genome shotgun project has the accession\nSWKX00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: HHMI/UCSF\nAssembly Date :: 30-NOV-2018\nAssembly Method :: AllPaths v. JAN-2015; HiRise v.\n NOV-2018\nAssembly Name :: lonStrDom2\nGenome Representation :: Full\nExpected Final Version :: Yes\nReference-guided Assembly :: GCA_002197715.1\nGenome Coverage :: 151.0x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Lonchura striata domestica\n Annotation Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 20015810
topology: linear
so has quality: SO_0000987
location: 1..20015810
location: region:1-20015810:1
RO_0002162: 299123

NC_042570
type: RefSeq
SIO_000068: refseq

PRJNA391487
type: BioProject
SIO_000068: bioproject

SAMN11521339
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20015810:1
position: 20015810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-20015810:1:source
so part of: sequence
organism: Lonchura striata domestica
mol type: genomic DNA
isolate: Mets1
sub species: domestica
chromosome: 4A
sex: male
tissue type: blood
dev stage: adult

299123
type: Taxonomy
SIO_000068: taxonomy

LOC110476867
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110476867
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2772..5414)
location: region:2772-5414:-1
so has part: feature:2772-5414:-1:exon
subclass of: SO_0000011

110476867
type: Gene
SIO_000068: ncbigene

position:2772:-1
position: 2772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5414:-1
position: 5414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2772-5414:-1:exon

LOC110476867
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110476867
product: uncharacterized LOC110476867
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_002466487.2
SIO_010081: LOC110476867
subclass of: SO_0000673
so part of: LOC110476867
location: complement(join(2772..2957,3045..3086,3165..3872,4240..5414))
location: region:2772-5414:-1
so has part: feature:4240-5414:-1:exon
so has part: feature:3165-3872:-1:exon
so has part: feature:3045-3086:-1:exon
so has part: feature:2772-2957:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4240-5414:-1:exon

position:4240:-1
position: 4240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3165-3872:-1:exon

position:3165:-1
position: 3165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3872:-1
position: 3872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3045-3086:-1:exon

position:3045:-1
position: 3045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3086:-1
position: 3086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2772-2957:-1:exon

position:2957:-1
position: 2957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116183631
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116183631
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 19345..20119
location: region:19345-20119:1
so has part: feature:19345-20119:1:exon
subclass of: SO_0000011

116183631
type: Gene
SIO_000068: ncbigene

position:19345:1
position: 19345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20119:1
position: 20119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19345-20119:1:exon

LOC116183631
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC116183631
product: uncharacterized LOC116183631
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004148293.1
SIO_010081: LOC116183631
subclass of: SO_0000673
so part of: LOC116183631
location: join(19345..19430,20000..20119)
location: region:19345-20119:1
so has part: feature:19345-19430:1:exon
so has part: feature:20000-20119:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19345-19430:1:exon

position:19430:1
position: 19430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:20000-20119:1:exon

position:20000:1
position: 20000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BRS3
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: BRS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 23195..29920
location: region:23195-29920:1
so has part: feature:23195-29920:1:exon
subclass of: SO_0000010

110476870
type: Gene
SIO_000068: ncbigene

position:23195:1
position: 23195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29920:1
position: 29920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23195-29920:1:exon

BRS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: BRS3
product: bombesin receptor subtype 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021542152.2
SIO_010081: BRS3
subclass of: SO_0000673
so part of: BRS3
location: join(23195..23841,26475..26826,27423..29920)
location: region:23195-29920:1
so has part: feature:23195-23841:1:exon
so has part: feature:26475-26826:1:exon
so has part: feature:27423-29920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23195-23841:1:exon

position:23841:1
position: 23841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:26475-26826:1:exon

position:26475:1
position: 26475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26826:1
position: 26826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:27423-29920:1:exon

position:27423:1
position: 27423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BRS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: BRS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bombesin receptor subtype-3
translation: MSQLYLQSANQTLCTSVDGTELKSSSDNETTNEKWIEDSFPGLEILCTIYVTYGVIISVGLLGNAILIKVFFKVKSMQTVPNIFITSLAFGDLLLLLTCVPIDATRYIVDTWLFGRIGCKLLSFIQLTSVGVSVFTLTVLSADRYRAIVKPLELQTSDALLKTCCKAGCVWVVSMIFAVPEAVFSDLYSFSNPEKNVTFEACAPYPVSEKILQEAHSLVCFLVFYIVPLAVISVYYFLIARTLYKSTSNMPAEEYSHAHKQIESRKRVAKTVLVLVALFAFCWLPNHILYLYRSFTYHTSINASTYHLIATIFSRALAFSNSCVNPFALYWLSKTFRQHFKKQVSCCKAAFCAKSSSAPQSSSPTRALSVTGSMHGSEVSVTLLTDYSITKEEESV
SIO_010081: BRS3
subclass of: SO_0000673
so part of: BRS3
location: join(23411..23841,26475..26826,27423..27830)
location: region:23411-27830:1
so has part: feature:23411-23841:1:exon
so has part: feature:26475-26826:1:exon
so has part: feature:27423-27830:1:exon

XP_021397827.1
type: Protein
SIO_000068: ncbiprotein

position:23411:1
position: 23411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27830:1
position: 27830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23411-23841:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:26475-26826:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27423-27830:1:exon

HTATSF1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: HTATSF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 33854..48576
location: region:33854-48576:1
so has part: feature:33854-48576:1:exon
subclass of: SO_0000010

110476871
type: Gene
SIO_000068: ncbigene

position:33854:1
position: 33854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48576:1
position: 48576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33854-48576:1:exon

HTATSF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: HTATSF1
product: HIV-1 Tat specific factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_021542153.2
SIO_010081: HTATSF1
subclass of: SO_0000673
so part of: HTATSF1
location: join(33854..34224,37733..37937,38242..38289,39417..39571,40581..40744,42335..42434,42940..43029,43510..43647,44001..48576)
location: region:33854-48576:1
so has part: feature:33854-34224:1:exon
so has part: feature:37733-37937:1:exon
so has part: feature:38242-38289:1:exon
so has part: feature:39417-39571:1:exon
so has part: feature:40581-40744:1:exon
so has part: feature:42335-42434:1:exon
so has part: feature:42940-43029:1:exon
so has part: feature:43510-43647:1:exon
so has part: feature:44001-48576:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33854-34224:1:exon

position:34224:1
position: 34224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:37733-37937:1:exon

position:37733:1
position: 37733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37937:1
position: 37937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:38242-38289:1:exon

position:38242:1
position: 38242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38289:1
position: 38289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:39417-39571:1:exon

position:39417:1
position: 39417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39571:1
position: 39571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:40581-40744:1:exon

position:40581:1
position: 40581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40744:1
position: 40744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:42335-42434:1:exon

position:42335:1
position: 42335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42434:1
position: 42434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:42940-43029:1:exon

position:42940:1
position: 42940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43029:1
position: 43029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:43510-43647:1:exon

position:43510:1
position: 43510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43647:1
position: 43647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:44001-48576:1:exon

position:44001:1
position: 44001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HTATSF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: HTATSF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HIV Tat-specific factor 1
translation: MSSEDGNEEFYRQLQLQQQYEAKPAEGEGESDPFTYVDPADGAAYEWDLEKKAWFPKITEDFLATYHANYGFHPDETDTSSASGTATESKQPVSSKKSGTQPSANETGQKQTDPKQKLEKRKLEPGWFHVEEDRNTNVYVTGLPPDITKDEFVQVMSKCGIIMRDPQTEEHKIKLYKDKEGNLKGDGLCCYLKRESVQLALRLLDEAEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYKKKLSQQQKQLDWRPEKKDGATRMRHERIIIIRNMFHPKDFEEDPLVLNEIREDLRTECEKFGQVKKVLIFDRHPDGVASVSFKEATEADLCKLTLNGRWFGGRQLSAETWDGVTDYQVEETAREREERLKVWESFLGDPDAKEQQTTSDSDSASSSVKLPEGKQPPEVNDTPKEDANDEIHKRENNGEGIDENGAPSTDSSLAGSDDETDT
SIO_010081: HTATSF1
subclass of: SO_0000673
so part of: HTATSF1
location: join(34054..34224,37733..37937,38242..38289,39417..39571,40581..40744,42335..42434,42940..43029,43510..43647,44001..44285)
location: region:34054-44285:1
so has part: feature:34054-34224:1:exon
so has part: feature:37733-37937:1:exon
so has part: feature:38242-38289:1:exon
so has part: feature:39417-39571:1:exon
so has part: feature:40581-40744:1:exon
so has part: feature:42335-42434:1:exon
so has part: feature:42940-43029:1:exon
so has part: feature:43510-43647:1:exon
so has part: feature:44001-44285:1:exon

XP_021397828.1
type: Protein
SIO_000068: ncbiprotein

position:34054:1
position: 34054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44285:1
position: 44285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34054-34224:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:37733-37937:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:38242-38289:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:39417-39571:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:40581-40744:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:42335-42434:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:42940-43029:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43510-43647:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:44001-44285:1:exon

VGLL1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: VGLL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 53302..57593
location: region:53302-57593:1
so has part: feature:53302-57593:1:exon
subclass of: SO_0000010

116183632
type: Gene
SIO_000068: ncbigene

position:53302:1
position: 53302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57593:1
position: 57593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53302-57593:1:exon

VGLL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: VGLL1
product: vestigial like family member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031504753.1
SIO_010081: VGLL1
subclass of: SO_0000673
so part of: VGLL1
location: join(53302..53581,54169..54588,57352..57593)
location: region:53302-57593:1
so has part: feature:53302-53581:1:exon
so has part: feature:54169-54588:1:exon
so has part: feature:57352-57593:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:53302-53581:1:exon

position:53581:1
position: 53581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:54169-54588:1:exon

position:54169:1
position: 54169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54588:1
position: 54588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:57352-57593:1:exon

position:57352:1
position: 57352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VGLL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: VGLL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 1
translation: MEETRKLSPKLSKSKEPVKTEWESQSVVFTYFQGDINSMVDEHFSRALSNAKNPQDLSTKHKSETVVLKNVDSMSPHQWNFSSHCYKPYPSPSSTSMANSALNFSAAGVVGQCQPSSLRSCPGQPADLWPFPPAGTPSVTSSMYPHTLPDLHIADELISDRKYSSLLGLLQQERCLTSMQECTMKQHSSSACMTGPARLQNMSQSSPPGGGIQIHDRRQDLYF
SIO_010081: VGLL1
subclass of: SO_0000673
so part of: VGLL1
location: join(53371..53581,54169..54588,57352..57392)
location: region:53371-57392:1
so has part: feature:53371-53581:1:exon
so has part: feature:54169-54588:1:exon
so has part: feature:57352-57392:1:exon

XP_031360613.1
type: Protein
SIO_000068: ncbiprotein

position:53371:1
position: 53371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57392:1
position: 57392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53371-53581:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:54169-54588:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:57352-57392:1:exon

CD40LG
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: CD40LG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 73820..80270
location: region:73820-80270:1
so has part: feature:73820-80270:1:exon
subclass of: SO_0000010

110476868
type: Gene
SIO_000068: ncbigene

position:73820:1
position: 73820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80270:1
position: 80270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73820-80270:1:exon

CD40LG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: CD40LG
product: CD40 ligand
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 9 Proteins, and 60% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021542149.1
SIO_010081: CD40LG
subclass of: SO_0000673
so part of: CD40LG
location: join(73820..74029,75816..75953,77059..77101,77407..77463,77745..77807,79692..80270)
location: region:73820-80270:1
so has part: feature:73820-74029:1:exon
so has part: feature:75816-75953:1:exon
so has part: feature:77059-77101:1:exon
so has part: feature:77407-77463:1:exon
so has part: feature:77745-77807:1:exon
so has part: feature:79692-80270:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:73820-74029:1:exon

position:74029:1
position: 74029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:75816-75953:1:exon

position:75816:1
position: 75816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75953:1
position: 75953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:77059-77101:1:exon

position:77059:1
position: 77059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77101:1
position: 77101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:77407-77463:1:exon

position:77407:1
position: 77407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77463:1
position: 77463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:77745-77807:1:exon

position:77745:1
position: 77745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77807:1
position: 77807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:79692-80270:1:exon

position:79692:1
position: 79692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CD40LG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: CD40LG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD40 ligand
translation: MNEPYGPEAPRPINSTSPGTMKMFMGFLTVFTVVQTIGTVLFCLYLHMKMDKMEEVLSLNEDYIFLKKVQKCQTVEGQKSTLLDCEKIIKGFQNIQCKDRPPKEQPKFEMQRGPDHHEHPGLMHKNETSVAAEKREPIAVHLAGQQSNKEGSVLEWRETMYGPTNSLISNKEGKLKVEEAGLYYIYSQVSFCTPEVSLAPFTLYIYLHIPKEEDRLLLKGQKTQSSLKTREEGHLKTLCELQSIRVGGVFNLREDDMVFVNVTDSTKVRYSHGNTYFGIFKL
SIO_010081: CD40LG
subclass of: SO_0000673
so part of: CD40LG
location: join(73874..74029,75816..75953,77059..77101,77407..77463,77745..77807,79692..80083)
location: region:73874-80083:1
so has part: feature:73874-74029:1:exon
so has part: feature:75816-75953:1:exon
so has part: feature:77059-77101:1:exon
so has part: feature:77407-77463:1:exon
so has part: feature:77745-77807:1:exon
so has part: feature:79692-80083:1:exon

XP_021397824.1
type: Protein
SIO_000068: ncbiprotein

position:73874:1
position: 73874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80083:1
position: 80083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73874-74029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:75816-75953:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:77059-77101:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:77407-77463:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:77745-77807:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:79692-80083:1:exon

ARHGEF6
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: ARHGEF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(84125..122922)
location: region:84125-122922:-1
so has part: feature:84125-122922:-1:exon
subclass of: SO_0000010

110476872
type: Gene
SIO_000068: ncbigene

position:84125:-1
position: 84125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122922:-1
position: 122922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84125-122922:-1:exon

ARHGEF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ARHGEF6
product: Rac/Cdc42 guanine nucleotide exchange factor 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021542155.2
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(84125..86453,87371..87425,88241..88340,89041..89130,90247..90340,93873..93998,94249..94382,95256..95334,96334..96420,97281..97427,99552..99611,101487..101625,102955..103077,103900..103995,104630..104724,105894..105964,108488..108689,109101..109228,113820..113904,121568..121651,122662..122922))
location: region:84125-122922:-1
so has part: feature:122662-122922:-1:exon
so has part: feature:121568-121651:-1:exon
so has part: feature:113820-113904:-1:exon
so has part: feature:109101-109228:-1:exon
so has part: feature:108488-108689:-1:exon
so has part: feature:105894-105964:-1:exon
so has part: feature:104630-104724:-1:exon
so has part: feature:103900-103995:-1:exon
so has part: feature:102955-103077:-1:exon
so has part: feature:101487-101625:-1:exon
so has part: feature:99552-99611:-1:exon
so has part: feature:97281-97427:-1:exon
so has part: feature:96334-96420:-1:exon
so has part: feature:95256-95334:-1:exon
so has part: feature:94249-94382:-1:exon
so has part: feature:93873-93998:-1:exon
so has part: feature:90247-90340:-1:exon
so has part: feature:89041-89130:-1:exon
so has part: feature:88241-88340:-1:exon
so has part: feature:87371-87425:-1:exon
so has part: feature:84125-86453:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122662-122922:-1:exon

position:122662:-1
position: 122662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:121568-121651:-1:exon

position:121568:-1
position: 121568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121651:-1
position: 121651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:113820-113904:-1:exon

position:113820:-1
position: 113820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113904:-1
position: 113904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:109101-109228:-1:exon

position:109101:-1
position: 109101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109228:-1
position: 109228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:108488-108689:-1:exon

position:108488:-1
position: 108488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108689:-1
position: 108689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:105894-105964:-1:exon

position:105894:-1
position: 105894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105964:-1
position: 105964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:104630-104724:-1:exon

position:104630:-1
position: 104630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104724:-1
position: 104724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:103900-103995:-1:exon

position:103900:-1
position: 103900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103995:-1
position: 103995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:102955-103077:-1:exon

position:102955:-1
position: 102955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103077:-1
position: 103077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:101487-101625:-1:exon

position:101487:-1
position: 101487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101625:-1
position: 101625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:99552-99611:-1:exon

position:99552:-1
position: 99552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99611:-1
position: 99611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:97281-97427:-1:exon

position:97281:-1
position: 97281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97427:-1
position: 97427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:96334-96420:-1:exon

position:96334:-1
position: 96334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96420:-1
position: 96420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:95256-95334:-1:exon

position:95256:-1
position: 95256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95334:-1
position: 95334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:94249-94382:-1:exon

position:94249:-1
position: 94249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94382:-1
position: 94382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:93873-93998:-1:exon

position:93873:-1
position: 93873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93998:-1
position: 93998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:90247-90340:-1:exon

position:90247:-1
position: 90247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90340:-1
position: 90340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:89041-89130:-1:exon

position:89041:-1
position: 89041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89130:-1
position: 89130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:88241-88340:-1:exon

position:88241:-1
position: 88241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88340:-1
position: 88340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:87371-87425:-1:exon

position:87371:-1
position: 87371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87425:-1
position: 87425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:84125-86453:-1:exon

position:86453:-1
position: 86453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGEF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ARHGEF6
product: Rac/Cdc42 guanine nucleotide exchange factor 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021542154.2
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(84125..86453,87371..87425,88241..88340,89041..89130,90247..90340,91148..91168,93873..93998,94249..94382,95256..95334,96334..96420,97281..97427,99552..99611,101487..101625,102955..103077,103900..103995,104630..104724,105894..105964,108488..108689,109101..109228,113820..113904,121568..121651,122662..122922))
location: region:84125-122922:-1
so has part: feature:122662-122922:-1:exon
so has part: feature:121568-121651:-1:exon
so has part: feature:113820-113904:-1:exon
so has part: feature:109101-109228:-1:exon
so has part: feature:108488-108689:-1:exon
so has part: feature:105894-105964:-1:exon
so has part: feature:104630-104724:-1:exon
so has part: feature:103900-103995:-1:exon
so has part: feature:102955-103077:-1:exon
so has part: feature:101487-101625:-1:exon
so has part: feature:99552-99611:-1:exon
so has part: feature:97281-97427:-1:exon
so has part: feature:96334-96420:-1:exon
so has part: feature:95256-95334:-1:exon
so has part: feature:94249-94382:-1:exon
so has part: feature:93873-93998:-1:exon
so has part: feature:91148-91168:-1:exon
so has part: feature:90247-90340:-1:exon
so has part: feature:89041-89130:-1:exon
so has part: feature:88241-88340:-1:exon
so has part: feature:87371-87425:-1:exon
so has part: feature:84125-86453:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122662-122922:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:121568-121651:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:113820-113904:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:109101-109228:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108488-108689:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:105894-105964:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:104630-104724:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:103900-103995:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:102955-103077:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:101487-101625:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:99552-99611:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:97281-97427:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:96334-96420:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:95256-95334:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:94249-94382:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:93873-93998:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:91148-91168:-1:exon

position:91148:-1
position: 91148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91168:-1
position: 91168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:90247-90340:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:89041-89130:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:88241-88340:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:87371-87425:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:84125-86453:-1:exon

ARHGEF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ARHGEF6
product: Rac/Cdc42 guanine nucleotide exchange factor 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_021542156.2
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(84125..86453,87371..87425,88241..88340,89041..89130,90247..90340,91148..91168,93873..93998,94249..94382,95256..95334,96334..96420,97281..97427,99552..99611,101487..101625,102955..103077,103900..103995,104630..104724,105894..105964,108488..108689,109101..109228,113820..113904,116805..116949))
location: region:84125-116949:-1
so has part: feature:116805-116949:-1:exon
so has part: feature:113820-113904:-1:exon
so has part: feature:109101-109228:-1:exon
so has part: feature:108488-108689:-1:exon
so has part: feature:105894-105964:-1:exon
so has part: feature:104630-104724:-1:exon
so has part: feature:103900-103995:-1:exon
so has part: feature:102955-103077:-1:exon
so has part: feature:101487-101625:-1:exon
so has part: feature:99552-99611:-1:exon
so has part: feature:97281-97427:-1:exon
so has part: feature:96334-96420:-1:exon
so has part: feature:95256-95334:-1:exon
so has part: feature:94249-94382:-1:exon
so has part: feature:93873-93998:-1:exon
so has part: feature:91148-91168:-1:exon
so has part: feature:90247-90340:-1:exon
so has part: feature:89041-89130:-1:exon
so has part: feature:88241-88340:-1:exon
so has part: feature:87371-87425:-1:exon
so has part: feature:84125-86453:-1:exon

position:116949:-1
position: 116949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116805-116949:-1:exon

position:116805:-1
position: 116805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:113820-113904:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:109101-109228:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:108488-108689:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:105894-105964:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:104630-104724:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:103900-103995:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102955-103077:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:101487-101625:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:99552-99611:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:97281-97427:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:96334-96420:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:95256-95334:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:94249-94382:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:93873-93998:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:91148-91168:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:90247-90340:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:89041-89130:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:88241-88340:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:87371-87425:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:84125-86453:-1:exon

ARHGEF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ARHGEF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 6 isoform X2
translation: MNPEEQIVTWLISLGVLNSPKKIVDDPEGFLKTSLKDGTVLCKLVNRLLPGSAEKYCLEPKNEADCISNIQEFLKGCTLLKVEVFDPHDLYTGDQFSKVLSTLTAVNKATEDQLSKEPCLHLSSLNSTAGDPQSDSNGTASQSARVLRRQSKPVEMTENGSYQLVVKARFNFKQTNEDELSVNKGDIIYVTRVEEGGWWEGTLNGKTGWFPSNYVREIKSTDKPLSPKALKGLENTQLTKNYYPVVLQNILETERDYAKELQSLLGTYLRPLQSYDKLSTGDIAALLGNMEEISAFQQTLNQALEEVAKLPENQQHVGGCFMNLMPQFRSLYLTYCANHPSAVNVLTQHSDELEKFMESQGAASPGILILTTSLSKPFLRLDKYVTMLQELERHMEEAHTDHEDVLKTITSFKSLVSQCQELRKRKQLELQILSESIQRWEGEDIKMMGNVIYMSQVMVQSGGSEEKEERYFLLFSNVLLMLSASPRMSGFIYQGKLPLTGMVLTKLDDAEGNEHVFEITGNTMERITVSCSTSQDLHEWLDHLQRLTKGTCSTVSKTQSWSPHSTFSSAGQIRGPLEPPKILKPWSLSCLRPAPPLRPSAALSYKEDSSKSPKTMKKFLPKRKTERKPSDEEFVIRKSTAALEEDAQILKVIEAYCTGAGFQQALSSGSRKDSIPQVLLPEEEKIIIEETRSNGQTVTEEKSLVDTVYALKDEVKELKQENKRMKQCLEEELKSRKDLEKLVRRLLKQTDECGREDTGRKSSLIA
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(86313..86453,87371..87425,88241..88340,89041..89130,90247..90340,93873..93998,94249..94382,95256..95334,96334..96420,97281..97427,99552..99611,101487..101625,102955..103077,103900..103995,104630..104724,105894..105964,108488..108689,109101..109228,113820..113904,121568..121651,122662..122826))
location: region:86313-122826:-1
so has part: feature:122662-122826:-1:exon
so has part: feature:121568-121651:-1:exon
so has part: feature:113820-113904:-1:exon
so has part: feature:109101-109228:-1:exon
so has part: feature:108488-108689:-1:exon
so has part: feature:105894-105964:-1:exon
so has part: feature:104630-104724:-1:exon
so has part: feature:103900-103995:-1:exon
so has part: feature:102955-103077:-1:exon
so has part: feature:101487-101625:-1:exon
so has part: feature:99552-99611:-1:exon
so has part: feature:97281-97427:-1:exon
so has part: feature:96334-96420:-1:exon
so has part: feature:95256-95334:-1:exon
so has part: feature:94249-94382:-1:exon
so has part: feature:93873-93998:-1:exon
so has part: feature:90247-90340:-1:exon
so has part: feature:89041-89130:-1:exon
so has part: feature:88241-88340:-1:exon
so has part: feature:87371-87425:-1:exon
so has part: feature:86313-86453:-1:exon

XP_021397830.1
type: Protein
SIO_000068: ncbiprotein

position:86313:-1
position: 86313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122826:-1
position: 122826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122662-122826:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:121568-121651:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:113820-113904:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:109101-109228:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108488-108689:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:105894-105964:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:104630-104724:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:103900-103995:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:102955-103077:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:101487-101625:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:99552-99611:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:97281-97427:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:96334-96420:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:95256-95334:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:94249-94382:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:93873-93998:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:90247-90340:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:89041-89130:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:88241-88340:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:87371-87425:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:86313-86453:-1:exon

ARHGEF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ARHGEF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 6 isoform X1
translation: MNPEEQIVTWLISLGVLNSPKKIVDDPEGFLKTSLKDGTVLCKLVNRLLPGSAEKYCLEPKNEADCISNIQEFLKGCTLLKVEVFDPHDLYTGDQFSKVLSTLTAVNKATEDQLSKEPCLHLSSLNSTAGDPQSDSNGTASQSARVLRRQSKPVEMTENGSYQLVVKARFNFKQTNEDELSVNKGDIIYVTRVEEGGWWEGTLNGKTGWFPSNYVREIKSTDKPLSPKALKGLENTQLTKNYYPVVLQNILETERDYAKELQSLLGTYLRPLQSYDKLSTGDIAALLGNMEEISAFQQTLNQALEEVAKLPENQQHVGGCFMNLMPQFRSLYLTYCANHPSAVNVLTQHSDELEKFMESQGAASPGILILTTSLSKPFLRLDKYVTMLQELERHMEEAHTDHEDVLKTITSFKSLVSQCQELRKRKQLELQILSESIQRWEGEDIKMMGNVIYMSQVMVQSGGSEEKEERYFLLFSNVLLMLSASPRMSGFIYQGKLPLTGMVLTKLDDAEGNEHVFEITGNTMERITVSCSTSQDLHEWLDHLQRLTKGTCSTVSKTQSWSPHSTFSSAGQIRGPLEPPKILKPWSLSCLRPAPPLRPSAALSYKERMSYILKDSSKSPKTMKKFLPKRKTERKPSDEEFVIRKSTAALEEDAQILKVIEAYCTGAGFQQALSSGSRKDSIPQVLLPEEEKIIIEETRSNGQTVTEEKSLVDTVYALKDEVKELKQENKRMKQCLEEELKSRKDLEKLVRRLLKQTDECGREDTGRKSSLIA
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(86313..86453,87371..87425,88241..88340,89041..89130,90247..90340,91148..91168,93873..93998,94249..94382,95256..95334,96334..96420,97281..97427,99552..99611,101487..101625,102955..103077,103900..103995,104630..104724,105894..105964,108488..108689,109101..109228,113820..113904,121568..121651,122662..122826))
location: region:86313-122826:-1
so has part: feature:122662-122826:-1:exon
so has part: feature:121568-121651:-1:exon
so has part: feature:113820-113904:-1:exon
so has part: feature:109101-109228:-1:exon
so has part: feature:108488-108689:-1:exon
so has part: feature:105894-105964:-1:exon
so has part: feature:104630-104724:-1:exon
so has part: feature:103900-103995:-1:exon
so has part: feature:102955-103077:-1:exon
so has part: feature:101487-101625:-1:exon
so has part: feature:99552-99611:-1:exon
so has part: feature:97281-97427:-1:exon
so has part: feature:96334-96420:-1:exon
so has part: feature:95256-95334:-1:exon
so has part: feature:94249-94382:-1:exon
so has part: feature:93873-93998:-1:exon
so has part: feature:91148-91168:-1:exon
so has part: feature:90247-90340:-1:exon
so has part: feature:89041-89130:-1:exon
so has part: feature:88241-88340:-1:exon
so has part: feature:87371-87425:-1:exon
so has part: feature:86313-86453:-1:exon

XP_021397829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122662-122826:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:121568-121651:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:113820-113904:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:109101-109228:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108488-108689:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:105894-105964:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:104630-104724:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:103900-103995:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:102955-103077:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:101487-101625:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:99552-99611:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:97281-97427:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:96334-96420:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:95256-95334:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:94249-94382:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:93873-93998:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:91148-91168:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:90247-90340:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:89041-89130:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:88241-88340:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:87371-87425:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:86313-86453:-1:exon

ARHGEF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ARHGEF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 6 isoform X3
translation: MTENGSYQLVVKARFNFKQTNEDELSVNKGDIIYVTRVEEGGWWEGTLNGKTGWFPSNYVREIKSTDKPLSPKALKGLENTQLTKNYYPVVLQNILETERDYAKELQSLLGTYLRPLQSYDKLSTGDIAALLGNMEEISAFQQTLNQALEEVAKLPENQQHVGGCFMNLMPQFRSLYLTYCANHPSAVNVLTQHSDELEKFMESQGAASPGILILTTSLSKPFLRLDKYVTMLQELERHMEEAHTDHEDVLKTITSFKSLVSQCQELRKRKQLELQILSESIQRWEGEDIKMMGNVIYMSQVMVQSGGSEEKEERYFLLFSNVLLMLSASPRMSGFIYQGKLPLTGMVLTKLDDAEGNEHVFEITGNTMERITVSCSTSQDLHEWLDHLQRLTKGTCSTVSKTQSWSPHSTFSSAGQIRGPLEPPKILKPWSLSCLRPAPPLRPSAALSYKERMSYILKDSSKSPKTMKKFLPKRKTERKPSDEEFVIRKSTAALEEDAQILKVIEAYCTGAGFQQALSSGSRKDSIPQVLLPEEEKIIIEETRSNGQTVTEEKSLVDTVYALKDEVKELKQENKRMKQCLEEELKSRKDLEKLVRRLLKQTDECGREDTGRKSSLIA
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(86313..86453,87371..87425,88241..88340,89041..89130,90247..90340,91148..91168,93873..93998,94249..94382,95256..95334,96334..96420,97281..97427,99552..99611,101487..101625,102955..103077,103900..103995,104630..104724,105894..105964,108488..108686))
location: region:86313-108686:-1
so has part: feature:108488-108686:-1:exon
so has part: feature:105894-105964:-1:exon
so has part: feature:104630-104724:-1:exon
so has part: feature:103900-103995:-1:exon
so has part: feature:102955-103077:-1:exon
so has part: feature:101487-101625:-1:exon
so has part: feature:99552-99611:-1:exon
so has part: feature:97281-97427:-1:exon
so has part: feature:96334-96420:-1:exon
so has part: feature:95256-95334:-1:exon
so has part: feature:94249-94382:-1:exon
so has part: feature:93873-93998:-1:exon
so has part: feature:91148-91168:-1:exon
so has part: feature:90247-90340:-1:exon
so has part: feature:89041-89130:-1:exon
so has part: feature:88241-88340:-1:exon
so has part: feature:87371-87425:-1:exon
so has part: feature:86313-86453:-1:exon

XP_021397831.1
type: Protein
SIO_000068: ncbiprotein

position:108686:-1
position: 108686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108488-108686:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105894-105964:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104630-104724:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:103900-103995:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:102955-103077:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101487-101625:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:99552-99611:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:97281-97427:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:96334-96420:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:95256-95334:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:94249-94382:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:93873-93998:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:91148-91168:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:90247-90340:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:89041-89130:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:88241-88340:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:87371-87425:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:86313-86453:-1:exon

RBMX
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: RBMX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(125636..141307)
location: region:125636-141307:-1
so has part: feature:125636-141307:-1:exon
subclass of: SO_0000010

110476873
type: Gene
SIO_000068: ncbigene

position:125636:-1
position: 125636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141307:-1
position: 141307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125636-141307:-1:exon

RBMX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: RBMX
product: RNA binding motif protein X-linked, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_021542159.2
SIO_010081: RBMX
subclass of: SO_0000673
so part of: RBMX
location: complement(join(125636..126557,128943..131156,131660..131748,131838..131963,132081..132195,132539..132655,133727..133898,139319..139425,139623..139749,141185..141307))
location: region:125636-141307:-1
so has part: feature:141185-141307:-1:exon
so has part: feature:139623-139749:-1:exon
so has part: feature:139319-139425:-1:exon
so has part: feature:133727-133898:-1:exon
so has part: feature:132539-132655:-1:exon
so has part: feature:132081-132195:-1:exon
so has part: feature:131838-131963:-1:exon
so has part: feature:131660-131748:-1:exon
so has part: feature:128943-131156:-1:exon
so has part: feature:125636-126557:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:141185-141307:-1:exon

position:141185:-1
position: 141185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:139623-139749:-1:exon

position:139623:-1
position: 139623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139749:-1
position: 139749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:139319-139425:-1:exon

position:139319:-1
position: 139319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139425:-1
position: 139425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:133727-133898:-1:exon

position:133727:-1
position: 133727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133898:-1
position: 133898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:132539-132655:-1:exon

position:132539:-1
position: 132539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132655:-1
position: 132655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:132081-132195:-1:exon

position:132081:-1
position: 132081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132195:-1
position: 132195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:131838-131963:-1:exon

position:131838:-1
position: 131838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131963:-1
position: 131963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:131660-131748:-1:exon

position:131660:-1
position: 131660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131748:-1
position: 131748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:128943-131156:-1:exon

position:128943:-1
position: 128943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131156:-1
position: 131156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:125636-126557:-1:exon

position:126557:-1
position: 126557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBMX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: RBMX
product: RNA binding motif protein X-linked, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 39 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021542158.2
SIO_010081: RBMX
subclass of: SO_0000673
so part of: RBMX
location: complement(join(125636..126557,128943..129029,129919..131156,131660..131763,131838..131963,132081..132195,132539..132655,133727..133898,139319..139425,139623..139749,141185..141307))
location: region:125636-141307:-1
so has part: feature:141185-141307:-1:exon
so has part: feature:139623-139749:-1:exon
so has part: feature:139319-139425:-1:exon
so has part: feature:133727-133898:-1:exon
so has part: feature:132539-132655:-1:exon
so has part: feature:132081-132195:-1:exon
so has part: feature:131838-131963:-1:exon
so has part: feature:131660-131763:-1:exon
so has part: feature:129919-131156:-1:exon
so has part: feature:128943-129029:-1:exon
so has part: feature:125636-126557:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:141185-141307:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:139623-139749:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:139319-139425:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133727-133898:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132539-132655:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:132081-132195:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:131838-131963:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:131660-131763:-1:exon

position:131763:-1
position: 131763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:129919-131156:-1:exon

position:129919:-1
position: 129919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:128943-129029:-1:exon

position:129029:-1
position: 129029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:125636-126557:-1:exon

RBMX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: RBMX
product: RNA binding motif protein X-linked, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 40 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_021542157.2
SIO_010081: RBMX
subclass of: SO_0000673
so part of: RBMX
location: complement(join(125636..126557,128943..131156,131660..131763,131838..131963,132081..132195,132539..132655,133727..133898,139319..139425,139623..139749,141185..141307))
location: region:125636-141307:-1
so has part: feature:141185-141307:-1:exon
so has part: feature:139623-139749:-1:exon
so has part: feature:139319-139425:-1:exon
so has part: feature:133727-133898:-1:exon
so has part: feature:132539-132655:-1:exon
so has part: feature:132081-132195:-1:exon
so has part: feature:131838-131963:-1:exon
so has part: feature:131660-131763:-1:exon
so has part: feature:128943-131156:-1:exon
so has part: feature:125636-126557:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:141185-141307:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:139623-139749:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:139319-139425:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133727-133898:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132539-132655:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:132081-132195:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:131838-131963:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:131660-131763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:128943-131156:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:125636-126557:-1:exon

RBMX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: RBMX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding motif protein, X chromosome isoform X2
translation: MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGGRRGPPPPPRSRGPPRGLRGARGGSGARGPPSRGSHLGSSRGPLPMKRGPPPRSGGPPPKRSAPSGPVRSSSMGGRAPVSRGRDGYGGPPRREPMPSRRDVYMSPRDDGYSTKDGYSSRDYPSSRDTRDYAPPPRDYAYRDYGHSSSRDEYPSRGYSDRDGYGGGRDRDYSDHPSGGSYRDSYESYGNSRSAPPARGPPPSYGGSSRYDDYGSTRDGYGSRESYSSSRSDVYSSGRDRVGRQDRGLPPSMERGYPPPRDSYSSSSRGAPRGGGRGGSRSDRGGGRSRY
SIO_010081: RBMX
subclass of: SO_0000673
so part of: RBMX
location: complement(join(130849..131156,131660..131748,131838..131963,132081..132195,132539..132655,133727..133898,139319..139425,139623..139731))
location: region:130849-139731:-1
so has part: feature:139623-139731:-1:exon
so has part: feature:139319-139425:-1:exon
so has part: feature:133727-133898:-1:exon
so has part: feature:132539-132655:-1:exon
so has part: feature:132081-132195:-1:exon
so has part: feature:131838-131963:-1:exon
so has part: feature:131660-131748:-1:exon
so has part: feature:130849-131156:-1:exon

XP_021397834.1
type: Protein
SIO_000068: ncbiprotein

position:130849:-1
position: 130849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139731:-1
position: 139731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139623-139731:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:139319-139425:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133727-133898:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132539-132655:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132081-132195:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131838-131963:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:131660-131748:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:130849-131156:-1:exon

RBMX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: RBMX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding motif protein, X chromosome isoform X1
translation: MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGGRRGPPPPPRSRGPPRGLRGARGGSGARGPPSRGSHLGSSRGPLPMKRGPPPRSGGPPPKRSAPSGPVRSSSMGGRAPVSRGRDGYGGPPRREPMPSRRDVYMSPRDDGYSTKDGYSSRDYPSSRDTRDYAPPPRDYAYRDYGHSSSRDEYPSRGYSLSSYSDRDGYGGGRDRDYSDHPSGGSYRDSYESYGNSRSAPPARGPPPSYGGSSRYDDYGSTRDGYGSRESYSSSRSDVYSSGRDRVGRQDRGLPPSMERGYPPPRDSYSSSSRGAPRGGGRGGSRSDRGGGRSRY
SIO_010081: RBMX
subclass of: SO_0000673
so part of: RBMX
location: complement(join(130849..131156,131660..131763,131838..131963,132081..132195,132539..132655,133727..133898,139319..139425,139623..139731))
location: region:130849-139731:-1
so has part: feature:139623-139731:-1:exon
so has part: feature:139319-139425:-1:exon
so has part: feature:133727-133898:-1:exon
so has part: feature:132539-132655:-1:exon
so has part: feature:132081-132195:-1:exon
so has part: feature:131838-131963:-1:exon
so has part: feature:131660-131763:-1:exon
so has part: feature:130849-131156:-1:exon

XP_021397832.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139623-139731:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:139319-139425:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133727-133898:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132539-132655:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132081-132195:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131838-131963:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:131660-131763:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:130849-131156:-1:exon

RBMX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: RBMX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding motif protein, X chromosome isoform X1
translation: MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGGRRGPPPPPRSRGPPRGLRGARGGSGARGPPSRGSHLGSSRGPLPMKRGPPPRSGGPPPKRSAPSGPVRSSSMGGRAPVSRGRDGYGGPPRREPMPSRRDVYMSPRDDGYSTKDGYSSRDYPSSRDTRDYAPPPRDYAYRDYGHSSSRDEYPSRGYSLSSYSDRDGYGGGRDRDYSDHPSGGSYRDSYESYGNSRSAPPARGPPPSYGGSSRYDDYGSTRDGYGSRESYSSSRSDVYSSGRDRVGRQDRGLPPSMERGYPPPRDSYSSSSRGAPRGGGRGGSRSDRGGGRSRY
SIO_010081: RBMX
subclass of: SO_0000673
so part of: RBMX
location: complement(join(130849..131156,131660..131763,131838..131963,132081..132195,132539..132655,133727..133898,139319..139425,139623..139731))
location: region:130849-139731:-1
so has part: feature:139623-139731:-1:exon
so has part: feature:139319-139425:-1:exon
so has part: feature:133727-133898:-1:exon
so has part: feature:132539-132655:-1:exon
so has part: feature:132081-132195:-1:exon
so has part: feature:131838-131963:-1:exon
so has part: feature:131660-131763:-1:exon
so has part: feature:130849-131156:-1:exon

XP_021397833.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139623-139731:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:139319-139425:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133727-133898:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132539-132655:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132081-132195:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131838-131963:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:131660-131763:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:130849-131156:-1:exon

LOC116183665
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116183665
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(139499..139570)
location: region:139499-139570:-1
so has part: feature:139499-139570:-1:exon
subclass of: SO_0000578

116183665
type: Gene
SIO_000068: ncbigene

position:139499:-1
position: 139499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139570:-1
position: 139570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139499-139570:-1:exon

LOC116183665
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: snoRNA
gene: LOC116183665
product: small nucleolar RNA SNORD61
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00270
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004148332.1
SIO_010081: LOC116183665
subclass of: SO_0000673
so part of: LOC116183665
location: complement(139499..139570)
location: region:139499-139570:-1
so has part: feature:139499-139570:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:139499-139570:-1:exon

LOC110476874
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110476874
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 144405..169336
location: region:144405-169336:1
so has part: feature:144405-169336:1:exon
subclass of: SO_0000010

110476874
type: Gene
SIO_000068: ncbigene

position:144405:1
position: 144405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169336:1
position: 169336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144405-169336:1:exon

LOC110476874
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110476874
product: transmembrane 9 superfamily member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 17 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021542161.1
SIO_010081: LOC110476874
subclass of: SO_0000673
so part of: LOC110476874
location: join(144405..144624,144951..145018,146299..146392,147938..148065,148290..148419,149378..149505,150688..150799,152912..152991,153885..153993,157176..157308,158378..158497,158656..158713,161570..161729,162405..162556,163529..163640,164056..164227,168697..169336)
location: region:144405-169336:1
so has part: feature:144405-144624:1:exon
so has part: feature:144951-145018:1:exon
so has part: feature:146299-146392:1:exon
so has part: feature:147938-148065:1:exon
so has part: feature:148290-148419:1:exon
so has part: feature:149378-149505:1:exon
so has part: feature:150688-150799:1:exon
so has part: feature:152912-152991:1:exon
so has part: feature:153885-153993:1:exon
so has part: feature:157176-157308:1:exon
so has part: feature:158378-158497:1:exon
so has part: feature:158656-158713:1:exon
so has part: feature:161570-161729:1:exon
so has part: feature:162405-162556:1:exon
so has part: feature:163529-163640:1:exon
so has part: feature:164056-164227:1:exon
so has part: feature:168697-169336:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:144405-144624:1:exon

position:144624:1
position: 144624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:144951-145018:1:exon

position:144951:1
position: 144951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145018:1
position: 145018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:146299-146392:1:exon

position:146299:1
position: 146299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146392:1
position: 146392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:147938-148065:1:exon

position:147938:1
position: 147938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148065:1
position: 148065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:148290-148419:1:exon

position:148290:1
position: 148290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148419:1
position: 148419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:149378-149505:1:exon

position:149378:1
position: 149378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149505:1
position: 149505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:150688-150799:1:exon

position:150688:1
position: 150688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150799:1
position: 150799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:152912-152991:1:exon

position:152912:1
position: 152912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152991:1
position: 152991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:153885-153993:1:exon

position:153885:1
position: 153885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153993:1
position: 153993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:157176-157308:1:exon

position:157176:1
position: 157176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157308:1
position: 157308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:158378-158497:1:exon

position:158378:1
position: 158378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158497:1
position: 158497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:158656-158713:1:exon

position:158656:1
position: 158656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158713:1
position: 158713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:161570-161729:1:exon

position:161570:1
position: 161570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161729:1
position: 161729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:162405-162556:1:exon

position:162405:1
position: 162405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162556:1
position: 162556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:163529-163640:1:exon

position:163529:1
position: 163529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163640:1
position: 163640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:164056-164227:1:exon

position:164056:1
position: 164056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164227:1
position: 164227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:168697-169336:1:exon

position:168697:1
position: 168697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110476874
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110476874
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane 9 superfamily member 2
translation: MRLLVAALFLVAPLGAAFYLPGLAPVSFCEESEESESCKSLIELFVNRLDSVESVLPYEYDAFDFCQDKEEKRPSENLGQVLFGERIASSPYKFTFQKQETCKKVCTRSYDPGNSADKSKLAFLKKGMQLNYQHHWIIDNMPVTWCYDVEDGQKYCNPGFPIGCFVTPDGRVKDACVINSEFNKKNTFYLFNHVDITIMYHSGKDENWPGARLVMARLRPQSYKHTDENNLSCEGPPMEIPGEFTSKLNLVYTYSVTFEEKNNIKWASRWDYILESMPHTNIQWFSIMNSLVIVLFLSGMVAMIILRTLHKDIARYNQIDSSEDAQEEFGWKLVHGDVFRPPRKGMLLSVFLGQGTQIFIMTFITLFLACLGFLSPANRGALMTCAVVLWVLLGTPAGYVSARMYKTFRGEKWKTNVLLTALLCPGIVFADFFIMNLILWVKGSSAAIPFGTLVAILAMWFGISVPLTFVGAYFGFKEKPIEHPVRTNQIPRQIPEQSFFTKPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILLITCSEATVLLCYFHLCAEDYHWWWRSFLTSSFTAVYLFIYAVHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVSKIYSVVKVD
SIO_010081: LOC110476874
subclass of: SO_0000673
so part of: LOC110476874
location: join(144508..144624,144951..145018,146299..146392,147938..148065,148290..148419,149378..149505,150688..150799,152912..152991,153885..153993,157176..157308,158378..158497,158656..158713,161570..161729,162405..162556,163529..163640,164056..164227,168697..168764)
location: region:144508-168764:1
so has part: feature:144508-144624:1:exon
so has part: feature:144951-145018:1:exon
so has part: feature:146299-146392:1:exon
so has part: feature:147938-148065:1:exon
so has part: feature:148290-148419:1:exon
so has part: feature:149378-149505:1:exon
so has part: feature:150688-150799:1:exon
so has part: feature:152912-152991:1:exon
so has part: feature:153885-153993:1:exon
so has part: feature:157176-157308:1:exon
so has part: feature:158378-158497:1:exon
so has part: feature:158656-158713:1:exon
so has part: feature:161570-161729:1:exon
so has part: feature:162405-162556:1:exon
so has part: feature:163529-163640:1:exon
so has part: feature:164056-164227:1:exon
so has part: feature:168697-168764:1:exon

XP_021397836.1
type: Protein
SIO_000068: ncbiprotein

position:144508:1
position: 144508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168764:1
position: 168764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144508-144624:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:144951-145018:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:146299-146392:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:147938-148065:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148290-148419:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:149378-149505:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:150688-150799:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:152912-152991:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:153885-153993:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:157176-157308:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:158378-158497:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:158656-158713:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:161570-161729:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:162405-162556:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:163529-163640:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:164056-164227:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:168697-168764:1:exon

ZIC3
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: ZIC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 280386..283632
location: region:280386-283632:1
so has part: feature:280386-283632:1:exon
subclass of: SO_0000010

110476869
type: Gene
SIO_000068: ncbigene

position:280386:1
position: 280386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283632:1
position: 283632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280386-283632:1:exon

ZIC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ZIC3
product: Zic family member 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 17 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021542150.1
SIO_010081: ZIC3
subclass of: SO_0000673
so part of: ZIC3
location: join(280386..281427,282079..282242,283123..283632)
location: region:280386-283632:1
so has part: feature:280386-281427:1:exon
so has part: feature:282079-282242:1:exon
so has part: feature:283123-283632:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:280386-281427:1:exon

position:281427:1
position: 281427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:282079-282242:1:exon

position:282079:1
position: 282079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282242:1
position: 282242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:283123-283632:1:exon

position:283123:1
position: 283123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZIC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ZIC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ZIC 3
translation: MTMLLDGGPQFPALGVGGFAAPRHHEMPGRDAAGGGMGLGPFGDSSHAAAFKLNAAPHDLAAGQSSAFTPQAPGYASALGHHHHHHHHAGQVPSYGGAAAFNSTRDFLFRNRGSGIADAASGTAQHGLFGGSPGGLHGPGGIPDTPGYLLFPGLHEQSPSHTSPNGHVDNGQMHLGLRGDLFGRPDPYRAVSSPRTDPYAGAQFHNYNHMNMNMGMNVAAHHHHHHHHGPGAFFRYMRQPIKQELSCKWLDESQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHICYWDECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKPYICKVCDKSYTHPSSLRKHMKVHESQGSDSSPAASSGYESSTPPAVGSAGSKDSTKTPPAALQSNPGHNPGLPPNFNEWYV
SIO_010081: ZIC3
subclass of: SO_0000673
so part of: ZIC3
location: join(280386..281427,282079..282242,283123..283305)
location: region:280386-283305:1
so has part: feature:280386-281427:1:exon
so has part: feature:282079-282242:1:exon
so has part: feature:283123-283305:1:exon

XP_021397825.1
type: Protein
SIO_000068: ncbiprotein

position:283305:1
position: 283305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280386-281427:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282079-282242:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283123-283305:1:exon

LOC110476875
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110476875
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 348389..354716
location: region:348389-354716:1
so has part: feature:348389-354716:1:exon
subclass of: SO_0000011

110476875
type: Gene
SIO_000068: ncbigene

position:348389:1
position: 348389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354716:1
position: 354716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348389-354716:1:exon

LOC110476875
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110476875
product: uncharacterized LOC110476875
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002466488.2
SIO_010081: LOC110476875
subclass of: SO_0000673
so part of: LOC110476875
location: join(348389..348519,350895..350981,354667..354716)
location: region:348389-354716:1
so has part: feature:348389-348519:1:exon
so has part: feature:350895-350981:1:exon
so has part: feature:354667-354716:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:348389-348519:1:exon

position:348519:1
position: 348519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:350895-350981:1:exon

position:350895:1
position: 350895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350981:1
position: 350981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:354667-354716:1:exon

position:354667:1
position: 354667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110476876
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110476876
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 354744..469279
location: region:354744-469279:1
so has part: feature:354744-469279:1:exon
subclass of: SO_0000011

110476876
type: Gene
SIO_000068: ncbigene

position:354744:1
position: 354744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469279:1
position: 469279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354744-469279:1:exon

LOC110476876
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110476876
product: uncharacterized LOC110476876
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004148302.1
SIO_010081: LOC110476876
subclass of: SO_0000673
so part of: LOC110476876
location: join(354744..354847,356173..356316,368066..368223,371055..371169,371308..371389,374135..374222,375524..375686,376250..376300,379153..379298,391058..391157,431790..431929,434678..434939,464680..464914,465416..465444,469058..469279)
location: region:354744-469279:1
so has part: feature:354744-354847:1:exon
so has part: feature:356173-356316:1:exon
so has part: feature:368066-368223:1:exon
so has part: feature:371055-371169:1:exon
so has part: feature:371308-371389:1:exon
so has part: feature:374135-374222:1:exon
so has part: feature:375524-375686:1:exon
so has part: feature:376250-376300:1:exon
so has part: feature:379153-379298:1:exon
so has part: feature:391058-391157:1:exon
so has part: feature:431790-431929:1:exon
so has part: feature:434678-434939:1:exon
so has part: feature:464680-464914:1:exon
so has part: feature:465416-465444:1:exon
so has part: feature:469058-469279:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:354744-354847:1:exon

position:354847:1
position: 354847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:356173-356316:1:exon

position:356173:1
position: 356173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356316:1
position: 356316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:368066-368223:1:exon

position:368066:1
position: 368066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368223:1
position: 368223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:371055-371169:1:exon

position:371055:1
position: 371055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371169:1
position: 371169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:371308-371389:1:exon

position:371308:1
position: 371308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371389:1
position: 371389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:374135-374222:1:exon

position:374135:1
position: 374135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374222:1
position: 374222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:375524-375686:1:exon

position:375524:1
position: 375524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375686:1
position: 375686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:376250-376300:1:exon

position:376250:1
position: 376250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376300:1
position: 376300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:379153-379298:1:exon

position:379153:1
position: 379153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379298:1
position: 379298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:391058-391157:1:exon

position:391058:1
position: 391058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391157:1
position: 391157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:431790-431929:1:exon

position:431790:1
position: 431790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431929:1
position: 431929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:434678-434939:1:exon

position:434678:1
position: 434678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434939:1
position: 434939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:464680-464914:1:exon

position:464680:1
position: 464680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464914:1
position: 464914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:465416-465444:1:exon

position:465416:1
position: 465416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465444:1
position: 465444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:469058-469279:1:exon

position:469058:1
position: 469058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGF13
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: FGF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(469785..666007)
location: region:469785-666007:-1
so has part: feature:469785-666007:-1:exon
subclass of: SO_0000010

110476877
type: Gene
SIO_000068: ncbigene

position:469785:-1
position: 469785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666007:-1
position: 666007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469785-666007:-1:exon

FGF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: FGF13
product: fibroblast growth factor 13, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 12 ESTs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031504774.1
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(469785..471264,471700..471898,517972..518075,521553..521663,665644..666007))
location: region:469785-666007:-1
so has part: feature:665644-666007:-1:exon
so has part: feature:521553-521663:-1:exon
so has part: feature:517972-518075:-1:exon
so has part: feature:471700-471898:-1:exon
so has part: feature:469785-471264:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:665644-666007:-1:exon

position:665644:-1
position: 665644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:521553-521663:-1:exon

position:521553:-1
position: 521553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521663:-1
position: 521663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:517972-518075:-1:exon

position:517972:-1
position: 517972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518075:-1
position: 518075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:471700-471898:-1:exon

position:471700:-1
position: 471700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471898:-1
position: 471898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:469785-471264:-1:exon

position:471264:-1
position: 471264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FGF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: FGF13
product: fibroblast growth factor 13, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_031504773.1
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(469785..471264,471700..471898,517972..518075,521553..521663,559065..559232,665644..666002))
location: region:469785-666002:-1
so has part: feature:665644-666002:-1:exon
so has part: feature:559065-559232:-1:exon
so has part: feature:521553-521663:-1:exon
so has part: feature:517972-518075:-1:exon
so has part: feature:471700-471898:-1:exon
so has part: feature:469785-471264:-1:exon

position:666002:-1
position: 666002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:665644-666002:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:559065-559232:-1:exon

position:559065:-1
position: 559065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559232:-1
position: 559232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:521553-521663:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:517972-518075:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:471700-471898:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:469785-471264:-1:exon

FGF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: FGF13
product: fibroblast growth factor 13, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021542163.2
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(469785..471264,471700..471898,517972..518075,521553..521663,559065..559232,644725..644924))
location: region:469785-644924:-1
so has part: feature:644725-644924:-1:exon
so has part: feature:559065-559232:-1:exon
so has part: feature:521553-521663:-1:exon
so has part: feature:517972-518075:-1:exon
so has part: feature:471700-471898:-1:exon
so has part: feature:469785-471264:-1:exon

position:644924:-1
position: 644924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:644725-644924:-1:exon

position:644725:-1
position: 644725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:559065-559232:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:521553-521663:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:517972-518075:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:471700-471898:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:469785-471264:-1:exon

FGF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: FGF13
product: fibroblast growth factor 13, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021542164.2
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(469785..471264,471700..471898,517972..518075,521553..521663,559065..559232,569168..569190))
location: region:469785-569190:-1
so has part: feature:569168-569190:-1:exon
so has part: feature:559065-559232:-1:exon
so has part: feature:521553-521663:-1:exon
so has part: feature:517972-518075:-1:exon
so has part: feature:471700-471898:-1:exon
so has part: feature:469785-471264:-1:exon

position:569190:-1
position: 569190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569168-569190:-1:exon

position:569168:-1
position: 569168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:559065-559232:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:521553-521663:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:517972-518075:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:471700-471898:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:469785-471264:-1:exon

FGF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: FGF13
product: fibroblast growth factor 13, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 12 ESTs, 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_021542162.2
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(469785..471264,471700..471898,517972..518075,521553..521663,523567..524235))
location: region:469785-524235:-1
so has part: feature:523567-524235:-1:exon
so has part: feature:521553-521663:-1:exon
so has part: feature:517972-518075:-1:exon
so has part: feature:471700-471898:-1:exon
so has part: feature:469785-471264:-1:exon

position:524235:-1
position: 524235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523567-524235:-1:exon

position:523567:-1
position: 523567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:521553-521663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:517972-518075:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:471700-471898:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:469785-471264:-1:exon

FGF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: FGF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 13 isoform X4
translation: MSGKVIKPKEEKDASKEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKEEDSTYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSEHFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMSQNEST
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(471128..471264,471700..471898,517972..518075,521553..521663,665644..665692))
location: region:471128-665692:-1
so has part: feature:665644-665692:-1:exon
so has part: feature:521553-521663:-1:exon
so has part: feature:517972-518075:-1:exon
so has part: feature:471700-471898:-1:exon
so has part: feature:471128-471264:-1:exon

XP_031360634.1
type: Protein
SIO_000068: ncbiprotein

position:471128:-1
position: 471128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665692:-1
position: 665692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:665644-665692:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:521553-521663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:517972-518075:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:471700-471898:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:471128-471264:-1:exon

FGF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: FGF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 13 isoform X1
translation: MSGKVIKPKEEKDASKVMDDAPPGTQEYIMLRQDSIQSAELKKKESPFRAKCHEIFCCPLKQVHLKENTEPEEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKEEDSTYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSEHFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMSQNEST
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(471128..471264,471700..471898,517972..518075,521553..521663,559065..559232,665644..665692))
location: region:471128-665692:-1
so has part: feature:665644-665692:-1:exon
so has part: feature:559065-559232:-1:exon
so has part: feature:521553-521663:-1:exon
so has part: feature:517972-518075:-1:exon
so has part: feature:471700-471898:-1:exon
so has part: feature:471128-471264:-1:exon

XP_031360633.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:665644-665692:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:559065-559232:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:521553-521663:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:517972-518075:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:471700-471898:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:471128-471264:-1:exon

FGF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: FGF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 13 isoform X3
translation: MDDAPPGTQEYIMLRQDSIQSAELKKKESPFRAKCHEIFCCPLKQVHLKENTEPEEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKEEDSTYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSEHFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMSQNEST
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(471128..471264,471700..471898,517972..518075,521553..521663,559065..559230))
location: region:471128-559230:-1
so has part: feature:559065-559230:-1:exon
so has part: feature:521553-521663:-1:exon
so has part: feature:517972-518075:-1:exon
so has part: feature:471700-471898:-1:exon
so has part: feature:471128-471264:-1:exon

XP_021397838.1
type: Protein
SIO_000068: ncbiprotein

position:559230:-1
position: 559230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559065-559230:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:521553-521663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:517972-518075:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:471700-471898:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:471128-471264:-1:exon

FGF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: FGF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 13 isoform X3
translation: MDDAPPGTQEYIMLRQDSIQSAELKKKESPFRAKCHEIFCCPLKQVHLKENTEPEEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKEEDSTYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSEHFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMSQNEST
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(471128..471264,471700..471898,517972..518075,521553..521663,559065..559230))
location: region:471128-559230:-1
so has part: feature:559065-559230:-1:exon
so has part: feature:521553-521663:-1:exon
so has part: feature:517972-518075:-1:exon
so has part: feature:471700-471898:-1:exon
so has part: feature:471128-471264:-1:exon

XP_021397839.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:559065-559230:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:521553-521663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:517972-518075:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:471700-471898:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:471128-471264:-1:exon

FGF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: FGF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 13 isoform X2
translation: MAAAIASSLIRQKRQAREREKSNACKCVNSPSKSKGSCDKNKLNVFSRVKLFGSKKRRRRRPEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKEEDSTYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSEHFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMSQNEST
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(471128..471264,471700..471898,517972..518075,521553..521663,523567..523753))
location: region:471128-523753:-1
so has part: feature:523567-523753:-1:exon
so has part: feature:521553-521663:-1:exon
so has part: feature:517972-518075:-1:exon
so has part: feature:471700-471898:-1:exon
so has part: feature:471128-471264:-1:exon

XP_021397837.1
type: Protein
SIO_000068: ncbiprotein

position:523753:-1
position: 523753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523567-523753:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:521553-521663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:517972-518075:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:471700-471898:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:471128-471264:-1:exon

F9
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: F9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 700955..711468
location: region:700955-711468:1
so has part: feature:700955-711468:1:exon
subclass of: SO_0000010

110482933
type: Gene
SIO_000068: ncbigene

position:700955:1
position: 700955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:711468:1
position: 711468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:700955-711468:1:exon

F9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: F9
product: coagulation factor IX
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021552544.1
SIO_010081: F9
subclass of: SO_0000673
so part of: F9
location: join(700955..701101,703365..703528,703766..703790,705620..705733,707301..707429,709382..709614,710117..710240,710713..711468)
location: region:700955-711468:1
so has part: feature:700955-701101:1:exon
so has part: feature:703365-703528:1:exon
so has part: feature:703766-703790:1:exon
so has part: feature:705620-705733:1:exon
so has part: feature:707301-707429:1:exon
so has part: feature:709382-709614:1:exon
so has part: feature:710117-710240:1:exon
so has part: feature:710713-711468:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:700955-701101:1:exon

position:701101:1
position: 701101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:703365-703528:1:exon

position:703365:1
position: 703365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:703528:1
position: 703528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:703766-703790:1:exon

position:703766:1
position: 703766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:703790:1
position: 703790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:705620-705733:1:exon

position:705620:1
position: 705620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:705733:1
position: 705733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:707301-707429:1:exon

position:707301:1
position: 707301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:707429:1
position: 707429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:709382-709614:1:exon

position:709382:1
position: 709382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:709614:1
position: 709614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:710117-710240:1:exon

position:710117:1
position: 710117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:710240:1
position: 710240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:710713-711468:1:exon

position:710713:1
position: 710713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

F9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: F9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coagulation factor IX
translation: MANVPLVLSVCLLGACLAAENAVFIGSREASSVLQRQRRANSNRLEEVIPGNLERECIEEKCSYEEAREVFENEEKTMQFWQTYVDGDQCNPNPCKNGALCKDEINSYVCWCPAGYEGKNCEIDFTCAIKNGGCKHFCSHQPPQKVVCSCAAGYKLHEDGKSCEPTVPYPCGRITAPEAKRKLTRSMNTFEHWNITGDDPEDGPGEDNATESSTPAPSRITPVLRTGTRVVGGSDSMKGEVPWQVLLVNSEGFGFCGASIINEKWLVTAAHCLKPGYTHNITAVAGEHDTRSDDHTEQLRRVVRLLPHPTYNASINEYHNDIALLELEQPLTFNPYVTPICLGSREFTNALLKQGVGTVSGWGKVLFRGRQATTLQVLRVPFVDRPTCLKSTSTSILQNMFCAGFPSGGRDTCEGDSGGPYASEIEGTWFLTGITSWGEECALPGKYGIYTRVSKYLKWIKQTTRLP
SIO_010081: F9
subclass of: SO_0000673
so part of: F9
location: join(701035..701101,703365..703528,703766..703790,705620..705733,707301..707429,709382..709614,710117..710240,710713..711260)
location: region:701035-711260:1
so has part: feature:701035-701101:1:exon
so has part: feature:703365-703528:1:exon
so has part: feature:703766-703790:1:exon
so has part: feature:705620-705733:1:exon
so has part: feature:707301-707429:1:exon
so has part: feature:709382-709614:1:exon
so has part: feature:710117-710240:1:exon
so has part: feature:710713-711260:1:exon

XP_021408219.1
type: Protein
SIO_000068: ncbiprotein

position:701035:1
position: 701035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:711260:1
position: 711260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:701035-701101:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:703365-703528:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:703766-703790:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:705620-705733:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:707301-707429:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:709382-709614:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:710117-710240:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:710713-711260:1:exon

LOC110482932
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110482932
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(712221..717934)
location: region:712221-717934:-1
so has part: feature:712221-717934:-1:exon
subclass of: SO_0000011

110482932
type: Gene
SIO_000068: ncbigene

position:712221:-1
position: 712221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717934:-1
position: 717934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:712221-717934:-1:exon

LOC110482932
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110482932
product: uncharacterized LOC110482932
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_002467483.1
SIO_010081: LOC110482932
subclass of: SO_0000673
so part of: LOC110482932
location: complement(join(712221..714017,717142..717934))
location: region:712221-717934:-1
so has part: feature:717142-717934:-1:exon
so has part: feature:712221-714017:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:717142-717934:-1:exon

position:717142:-1
position: 717142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:712221-714017:-1:exon

position:714017:-1
position: 714017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MCF2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: MCF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 718214..741528
location: region:718214-741528:1
so has part: feature:718214-741528:1:exon
subclass of: SO_0000010

110484327
type: Gene
SIO_000068: ncbigene

position:718214:1
position: 718214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741528:1
position: 741528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:718214-741528:1:exon

MCF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: MCF2
product: MCF.2 cell line derived transforming sequence
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031504775.1
SIO_010081: MCF2
subclass of: SO_0000673
so part of: MCF2
location: join(718214..718375,721650..721774,722230..722344,722705..722824,723904..724095,725417..725608,725728..725899,728466..728554,729118..729206,729430..729496,731465..731580,731685..731754,732072..732164,732514..732606,733557..733682,734420..734641,736923..737015,737285..737363,738276..738342,738847..738953,739052..739161,739497..739609,740970..741070,741315..741528)
location: region:718214-741528:1
so has part: feature:718214-718375:1:exon
so has part: feature:721650-721774:1:exon
so has part: feature:722230-722344:1:exon
so has part: feature:722705-722824:1:exon
so has part: feature:723904-724095:1:exon
so has part: feature:725417-725608:1:exon
so has part: feature:725728-725899:1:exon
so has part: feature:728466-728554:1:exon
so has part: feature:729118-729206:1:exon
so has part: feature:729430-729496:1:exon
so has part: feature:731465-731580:1:exon
so has part: feature:731685-731754:1:exon
so has part: feature:732072-732164:1:exon
so has part: feature:732514-732606:1:exon
so has part: feature:733557-733682:1:exon
so has part: feature:734420-734641:1:exon
so has part: feature:736923-737015:1:exon
so has part: feature:737285-737363:1:exon
so has part: feature:738276-738342:1:exon
so has part: feature:738847-738953:1:exon
so has part: feature:739052-739161:1:exon
so has part: feature:739497-739609:1:exon
so has part: feature:740970-741070:1:exon
so has part: feature:741315-741528:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:718214-718375:1:exon

position:718375:1
position: 718375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:721650-721774:1:exon

position:721650:1
position: 721650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:721774:1
position: 721774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:722230-722344:1:exon

position:722230:1
position: 722230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722344:1
position: 722344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:722705-722824:1:exon

position:722705:1
position: 722705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722824:1
position: 722824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:723904-724095:1:exon

position:723904:1
position: 723904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:724095:1
position: 724095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:725417-725608:1:exon

position:725417:1
position: 725417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725608:1
position: 725608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:725728-725899:1:exon

position:725728:1
position: 725728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725899:1
position: 725899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:728466-728554:1:exon

position:728466:1
position: 728466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:728554:1
position: 728554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:729118-729206:1:exon

position:729118:1
position: 729118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:729206:1
position: 729206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:729430-729496:1:exon

position:729430:1
position: 729430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:729496:1
position: 729496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:731465-731580:1:exon

position:731465:1
position: 731465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731580:1
position: 731580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:731685-731754:1:exon

position:731685:1
position: 731685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731754:1
position: 731754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:732072-732164:1:exon

position:732072:1
position: 732072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732164:1
position: 732164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:732514-732606:1:exon

position:732514:1
position: 732514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732606:1
position: 732606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:733557-733682:1:exon

position:733557:1
position: 733557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:733682:1
position: 733682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:734420-734641:1:exon

position:734420:1
position: 734420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:734641:1
position: 734641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:736923-737015:1:exon

position:736923:1
position: 736923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:737015:1
position: 737015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:737285-737363:1:exon

position:737285:1
position: 737285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:737363:1
position: 737363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:738276-738342:1:exon

position:738276:1
position: 738276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:738342:1
position: 738342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:738847-738953:1:exon

position:738847:1
position: 738847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:738953:1
position: 738953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:739052-739161:1:exon

position:739052:1
position: 739052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739161:1
position: 739161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:739497-739609:1:exon

position:739497:1
position: 739497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739609:1
position: 739609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:740970-741070:1:exon

position:740970:1
position: 740970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741070:1
position: 741070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:741315-741528:1:exon

position:741315:1
position: 741315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MCF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: MCF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proto-oncogene DBL
translation: MLQSFGTELAEAELPEDMLSIERILALRTERYCQLKEDITAVTKEGNLLLSSFEEPDSGECSQEQQQERPGDWETVNRLLGQLREMETAFDGFWEKHQLKMEQYLQLWKFEQSFQEVKNAIEFLMGQQAELPDTGDSIPQVKQRLKDLDHFHGMAQELIGKAQLVILHGHQLAANHHYALNLICQQCNELRHHSDLLAEDIKRKQMRLQKTLELHTRLQQALQCCDEGAYLLANQQMDKCQSKEGAQKALQDIERFLESSSCYLNCDPQALHYDFESVLTSELKGQIQSVQVKLENVRSMFENRQCCFRRLLDKHVRPVQLVAPRPENPPRAKSPLFSPKHGVDFNSSLKFSFDLSLPGKKTSRKTPSSRKIEVMHDYQEKRSSLQCFISDSDDSLDILKGHVINELIETERVYVEELFTVLTGYRAEMDNPAMLILLPPVLRNRKDVLFGNMPEIYDFHNKIFLHSLENCLGAPERVGCCFLDRREDFQMYEKYCQNKPRSESLWRQCSESSFFQECQRKLEHKLGLDSYLLKPVQRLTKYQLLLKELLKYSTSCDGVQELQEALVAMLDLLKSVNDSMHQISITGYDGDLSELGKVLMQGSFSVWAGHRKGPTKMKELARFKPMQRHLFLYEKALVFCKKREEHGDGYDKTSSYSFKHFLKMNAVGITENVKGDHRKFEIWYSGREEVYVVQAQTVDLKMAWLNEIRKILFKQQELIKAGEKQQPGSCSEQLPLSSQPQDRKQQRASISSEENDSERSSPVLQDCGLLSPQRQPPKGWPGGSQSLEICEGLDEWSGQQYLSTCSDTEEEENQLSPGKYKALADCKRRGSEDLLVKNGDEIQLLHEDGEGQWLVKNLNRRKEGWIPVHSLQIVVGDCRFRNAKVADFIARALGRRPGRRDGV
SIO_010081: MCF2
subclass of: SO_0000673
so part of: MCF2
location: join(718268..718375,721650..721774,722230..722344,722705..722824,723904..724095,725417..725608,725728..725899,728466..728554,729118..729206,729430..729496,731465..731580,731685..731754,732072..732164,732514..732606,733557..733682,734420..734641,736923..737015,737285..737363,738276..738342,738847..738953,739052..739161,739497..739609,740970..741070,741315..741367)
location: region:718268-741367:1
so has part: feature:718268-718375:1:exon
so has part: feature:721650-721774:1:exon
so has part: feature:722230-722344:1:exon
so has part: feature:722705-722824:1:exon
so has part: feature:723904-724095:1:exon
so has part: feature:725417-725608:1:exon
so has part: feature:725728-725899:1:exon
so has part: feature:728466-728554:1:exon
so has part: feature:729118-729206:1:exon
so has part: feature:729430-729496:1:exon
so has part: feature:731465-731580:1:exon
so has part: feature:731685-731754:1:exon
so has part: feature:732072-732164:1:exon
so has part: feature:732514-732606:1:exon
so has part: feature:733557-733682:1:exon
so has part: feature:734420-734641:1:exon
so has part: feature:736923-737015:1:exon
so has part: feature:737285-737363:1:exon
so has part: feature:738276-738342:1:exon
so has part: feature:738847-738953:1:exon
so has part: feature:739052-739161:1:exon
so has part: feature:739497-739609:1:exon
so has part: feature:740970-741070:1:exon
so has part: feature:741315-741367:1:exon

XP_031360635.1
type: Protein
SIO_000068: ncbiprotein

position:718268:1
position: 718268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741367:1
position: 741367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:718268-718375:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:721650-721774:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:722230-722344:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:722705-722824:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:723904-724095:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:725417-725608:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:725728-725899:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:728466-728554:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:729118-729206:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:729430-729496:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:731465-731580:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:731685-731754:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:732072-732164:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:732514-732606:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:733557-733682:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:734420-734641:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:736923-737015:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:737285-737363:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:738276-738342:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:738847-738953:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:739052-739161:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:739497-739609:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:740970-741070:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:741315-741367:1:exon

LOC110469612
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110469612
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(746728..789124)
location: region:746728-789124:-1
so has part: feature:746728-789124:-1:exon
subclass of: SO_0000010

110469612
type: Gene
SIO_000068: ncbigene

position:746728:-1
position: 746728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789124:-1
position: 789124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:746728-789124:-1:exon

LOC110469612
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110469612
product: proto-oncogene DBL
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031504763.1
SIO_010081: LOC110469612
subclass of: SO_0000673
so part of: LOC110469612
location: complement(join(746728..747483,747971..748094,748583..748896,750632..750812,751773..751865,752219..752311,752629..752698,752803..752918,754899..754965,755189..755277,755841..755929,758496..758667,758787..758978,760300..760491,761571..761690,762051..762165,762621..762745,766020..766169,767285..767401,768332..768451,774615..774705,779914..780028,780571..780639,789026..789124))
location: region:746728-789124:-1
so has part: feature:789026-789124:-1:exon
so has part: feature:780571-780639:-1:exon
so has part: feature:779914-780028:-1:exon
so has part: feature:774615-774705:-1:exon
so has part: feature:768332-768451:-1:exon
so has part: feature:767285-767401:-1:exon
so has part: feature:766020-766169:-1:exon
so has part: feature:762621-762745:-1:exon
so has part: feature:762051-762165:-1:exon
so has part: feature:761571-761690:-1:exon
so has part: feature:760300-760491:-1:exon
so has part: feature:758787-758978:-1:exon
so has part: feature:758496-758667:-1:exon
so has part: feature:755841-755929:-1:exon
so has part: feature:755189-755277:-1:exon
so has part: feature:754899-754965:-1:exon
so has part: feature:752803-752918:-1:exon
so has part: feature:752629-752698:-1:exon
so has part: feature:752219-752311:-1:exon
so has part: feature:751773-751865:-1:exon
so has part: feature:750632-750812:-1:exon
so has part: feature:748583-748896:-1:exon
so has part: feature:747971-748094:-1:exon
so has part: feature:746728-747483:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:789026-789124:-1:exon

position:789026:-1
position: 789026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:780571-780639:-1:exon

position:780571:-1
position: 780571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780639:-1
position: 780639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:779914-780028:-1:exon

position:779914:-1
position: 779914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780028:-1
position: 780028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:774615-774705:-1:exon

position:774615:-1
position: 774615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:774705:-1
position: 774705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:768332-768451:-1:exon

position:768332:-1
position: 768332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:768451:-1
position: 768451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:767285-767401:-1:exon

position:767285:-1
position: 767285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:767401:-1
position: 767401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:766020-766169:-1:exon

position:766020:-1
position: 766020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:766169:-1
position: 766169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:762621-762745:-1:exon

position:762621:-1
position: 762621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:762745:-1
position: 762745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:762051-762165:-1:exon

position:762051:-1
position: 762051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:762165:-1
position: 762165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:761571-761690:-1:exon

position:761571:-1
position: 761571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761690:-1
position: 761690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:760300-760491:-1:exon

position:760300:-1
position: 760300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:760491:-1
position: 760491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:758787-758978:-1:exon

position:758787:-1
position: 758787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758978:-1
position: 758978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:758496-758667:-1:exon

position:758496:-1
position: 758496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758667:-1
position: 758667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:755841-755929:-1:exon

position:755841:-1
position: 755841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:755929:-1
position: 755929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:755189-755277:-1:exon

position:755189:-1
position: 755189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:755277:-1
position: 755277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:754899-754965:-1:exon

position:754899:-1
position: 754899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:754965:-1
position: 754965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:752803-752918:-1:exon

position:752803:-1
position: 752803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:752918:-1
position: 752918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:752629-752698:-1:exon

position:752629:-1
position: 752629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:752698:-1
position: 752698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:752219-752311:-1:exon

position:752219:-1
position: 752219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:752311:-1
position: 752311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:751773-751865:-1:exon

position:751773:-1
position: 751773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:751865:-1
position: 751865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:750632-750812:-1:exon

position:750632:-1
position: 750632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:750812:-1
position: 750812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:748583-748896:-1:exon

position:748583:-1
position: 748583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:748896:-1
position: 748896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:747971-748094:-1:exon

position:747971:-1
position: 747971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:748094:-1
position: 748094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:746728-747483:-1:exon

position:747483:-1
position: 747483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110469612
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110469612
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proto-oncogene DBL
translation: MERYYRLLRAAALLEAAAETAIPICAKDISDDLMKEFAFLSGGRGKDKAWIITLPDNAGFNQVPEESVSKVLTYLTAVPSQHESDTKFILILDRRLDTWTSVKTTLQKIAASFPGNLHLVMVLRPTGFFQRTFTDIGFRFSHEDFLLKLPVVMLSSVSDLLTYIDEQQLTPELGGTLEYCHSEWVIFRTAIESFALTVKEIAQMLQSFGTELAEAELPEDMLSIERILALRTERYCQLKEDITAVTKEGNLLLSSFEEPDSGECSQEQQQERPGDWETVNRLLGQLREMETAFDGFWEKHQLKMEQYLQLWKFEQSFQEVKNAIEFLMGQQAELPDTGDSIPQVKQRLKDLDHFHGMAQELIGKAQLVILHGHQLAANHHYALNLICQQCNELRHHSDLLAEDIKRKQMRLQKTLELHTRLQQALQCCDEGAYLLANQQMDKCQSKEGAQKALQDIERFLESSSCYLNCDPQALHYDFESVLTSELKGQIQSVQVKLENVRSMFENRQCCFRRLLDKHVRPVQLVAPRPENPPRAKSPLFSPKHGVDFNSSLKFSFDLSLPGKKTSRKTPSSRKIEVMHDYQEKRSSLQCFISDSDDSLDILKGHVINELIETERVYVEELFTVLTGYRAEMDNPAMLILLPPVLRNRKDVLFGNMPEIYDFHNKIFLHSLENCLGAPERVGCCFLDRREDFQMYEKYCQNKPRSESLWRQCSESSFFQECQRKLEHKLGLDSYLLKPVQRLTKYQLLLKELLKYSTSCDGVQELQEALVAMLDLLKSVNDSMHQISITGYDVSTLSKEPLHRLGDALATGEQGFPPRPAEVAVSDTAGPSCAVPPPVPYPCGRITAPEAKRKLTRSMNTFEHWNITGDDPEDGPGEDNATESSTPAPSRITPVLRTGTRVVGGSDSMKGEVPWQVLLVNSEGFGFCGASIINEKWLVTAAHCLKPGYTHNITAVAGEHDTRSDDHTEQLRRVVRLLPHPTYNASINEYHNDIALLELEQPLTFNPYVTPICLGSREFTNALLKQGVGTVSGWGKVLFRGRQATTLQVLRVPFVDRPTCLKSTSTSILQNMFCAGFPSGGRDTCEGDSGGPYASEIEGTWFLTGITSWGEECALPGKYGIYTRVSKYLKWIKQTTRLP
SIO_010081: LOC110469612
subclass of: SO_0000673
so part of: LOC110469612
location: complement(join(746936..747483,747971..748094,748583..748896,750632..750812,751773..751865,752219..752311,752629..752698,752803..752918,754899..754965,755189..755277,755841..755929,758496..758667,758787..758978,760300..760491,761571..761690,762051..762165,762621..762745,766020..766169,767285..767401,768332..768451,774615..774705,779914..780028,780571..780639,789026..789080))
location: region:746936-789080:-1
so has part: feature:789026-789080:-1:exon
so has part: feature:780571-780639:-1:exon
so has part: feature:779914-780028:-1:exon
so has part: feature:774615-774705:-1:exon
so has part: feature:768332-768451:-1:exon
so has part: feature:767285-767401:-1:exon
so has part: feature:766020-766169:-1:exon
so has part: feature:762621-762745:-1:exon
so has part: feature:762051-762165:-1:exon
so has part: feature:761571-761690:-1:exon
so has part: feature:760300-760491:-1:exon
so has part: feature:758787-758978:-1:exon
so has part: feature:758496-758667:-1:exon
so has part: feature:755841-755929:-1:exon
so has part: feature:755189-755277:-1:exon
so has part: feature:754899-754965:-1:exon
so has part: feature:752803-752918:-1:exon
so has part: feature:752629-752698:-1:exon
so has part: feature:752219-752311:-1:exon
so has part: feature:751773-751865:-1:exon
so has part: feature:750632-750812:-1:exon
so has part: feature:748583-748896:-1:exon
so has part: feature:747971-748094:-1:exon
so has part: feature:746936-747483:-1:exon

XP_031360623.1
type: Protein
SIO_000068: ncbiprotein

position:746936:-1
position: 746936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789080:-1
position: 789080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:789026-789080:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:780571-780639:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:779914-780028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:774615-774705:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:768332-768451:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:767285-767401:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:766020-766169:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:762621-762745:-1:exon

urn:…
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SIO_000628: feature:762051-762165:-1:exon

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SIO_000628: feature:761571-761690:-1:exon

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SIO_000628: feature:760300-760491:-1:exon

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SIO_000628: feature:758787-758978:-1:exon

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SIO_000300: 13
SIO_000628: feature:758496-758667:-1:exon

urn:…
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SIO_000628: feature:755841-755929:-1:exon

urn:…
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SIO_000628: feature:755189-755277:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:754899-754965:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:752803-752918:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:752629-752698:-1:exon

urn:…
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SIO_000628: feature:752219-752311:-1:exon

urn:…
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SIO_000628: feature:751773-751865:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:750632-750812:-1:exon

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SIO_000300: 22
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urn:…
SIO_000300: 23
SIO_000628: feature:747971-748094:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:746936-747483:-1:exon

ATP11C
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(793317..837219)
location: region:793317-837219:-1
so has part: feature:793317-837219:-1:exon
subclass of: SO_0000010

110469598
type: Gene
SIO_000068: ncbigene

position:793317:-1
position: 793317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:837219:-1
position: 837219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:793317-837219:-1:exon

ATP11C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ATP11C
product: ATPase phospholipid transporting 11C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021528498.2
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(793317..796594,800694..800847,802248..802351,803111..803176,805820..805955,808321..808448,809470..809529,809899..810044,810997..811099,811747..811918,812249..812512,813049..813230,813757..813860,814494..814567,815438..815509,816370..816527,816602..816763,817659..817856,818650..818800,819173..819254,820563..820627,821465..821515,822129..822232,823961..824089,824672..824779,825738..825818,828609..828698,830304..830423,836543..837219))
location: region:793317-837219:-1
so has part: feature:836543-837219:-1:exon
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so has part: feature:825738-825818:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:836543-837219:-1:exon

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urn:…
SIO_000300: 2
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urn:…
SIO_000300: 3
SIO_000628: feature:828609-828698:-1:exon

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reference: sequence
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urn:…
SIO_000300: 4
SIO_000628: feature:825738-825818:-1:exon

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position: 825738
reference: sequence
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position:825818:-1
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urn:…
SIO_000300: 5
SIO_000628: feature:824672-824779:-1:exon

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reference: sequence
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position:824779:-1
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urn:…
SIO_000300: 6
SIO_000628: feature:823961-824089:-1:exon

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reference: sequence
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position:824089:-1
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urn:…
SIO_000300: 7
SIO_000628: feature:822129-822232:-1:exon

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reference: sequence
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type: ExactPosition

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reference: sequence
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urn:…
SIO_000300: 8
SIO_000628: feature:821465-821515:-1:exon

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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:821515:-1
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reference: sequence
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urn:…
SIO_000300: 9
SIO_000628: feature:820563-820627:-1:exon

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position: 820563
reference: sequence
type: ReverseStrandPosition
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position:820627:-1
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urn:…
SIO_000300: 10
SIO_000628: feature:819173-819254:-1:exon

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position: 819173
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 11
SIO_000628: feature:818650-818800:-1:exon

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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818800:-1
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reference: sequence
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urn:…
SIO_000300: 12
SIO_000628: feature:817659-817856:-1:exon

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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817856:-1
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reference: sequence
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urn:…
SIO_000300: 13
SIO_000628: feature:816602-816763:-1:exon

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position: 816602
reference: sequence
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position:816763:-1
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reference: sequence
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urn:…
SIO_000300: 14
SIO_000628: feature:816370-816527:-1:exon

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reference: sequence
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type: ExactPosition

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urn:…
SIO_000300: 15
SIO_000628: feature:815438-815509:-1:exon

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reference: sequence
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urn:…
SIO_000300: 16
SIO_000628: feature:814494-814567:-1:exon

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reference: sequence
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type: ExactPosition

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urn:…
SIO_000300: 17
SIO_000628: feature:813757-813860:-1:exon

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urn:…
SIO_000300: 18
SIO_000628: feature:813049-813230:-1:exon

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reference: sequence
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urn:…
SIO_000300: 19
SIO_000628: feature:812249-812512:-1:exon

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reference: sequence
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urn:…
SIO_000300: 20
SIO_000628: feature:811747-811918:-1:exon

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urn:…
SIO_000300: 21
SIO_000628: feature:810997-811099:-1:exon

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urn:…
SIO_000300: 22
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urn:…
SIO_000300: 23
SIO_000628: feature:809470-809529:-1:exon

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urn:…
SIO_000300: 24
SIO_000628: feature:808321-808448:-1:exon

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urn:…
SIO_000300: 25
SIO_000628: feature:805820-805955:-1:exon

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urn:…
SIO_000300: 26
SIO_000628: feature:803111-803176:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 27
SIO_000628: feature:802248-802351:-1:exon

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reference: sequence
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urn:…
SIO_000300: 28
SIO_000628: feature:800694-800847:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 29
SIO_000628: feature:793317-796594:-1:exon

position:796594:-1
position: 796594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP11C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ATP11C
product: ATPase phospholipid transporting 11C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021528497.2
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(793317..796594,800694..800847,802248..802351,803111..803176,805820..805955,808321..808448,809470..809529,809899..810044,810997..811099,811747..811921,812249..812512,813049..813230,813757..813860,814494..814567,815438..815509,816370..816527,816602..816763,817659..817856,818650..818800,819173..819254,820563..820627,821465..821515,822129..822232,823961..824089,824672..824779,825738..825818,828609..828698,830304..830423,836543..837219))
location: region:793317-837219:-1
so has part: feature:836543-837219:-1:exon
so has part: feature:830304-830423:-1:exon
so has part: feature:828609-828698:-1:exon
so has part: feature:825738-825818:-1:exon
so has part: feature:824672-824779:-1:exon
so has part: feature:823961-824089:-1:exon
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so has part: feature:821465-821515:-1:exon
so has part: feature:820563-820627:-1:exon
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so has part: feature:817659-817856:-1:exon
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so has part: feature:800694-800847:-1:exon
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urn:…
SIO_000300: 1
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SIO_000628: feature:830304-830423:-1:exon

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SIO_000628: feature:819173-819254:-1:exon

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SIO_000628: feature:817659-817856:-1:exon

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SIO_000300: 19
SIO_000628: feature:812249-812512:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:811747-811921:-1:exon

position:811921:-1
position: 811921
reference: sequence
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urn:…
SIO_000300: 21
SIO_000628: feature:810997-811099:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:809899-810044:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:809470-809529:-1:exon

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SIO_000300: 24
SIO_000628: feature:808321-808448:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:805820-805955:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:803111-803176:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:802248-802351:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:800694-800847:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:793317-796594:-1:exon

ATP11C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ATP11C
product: ATPase phospholipid transporting 11C, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021528499.2
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(793317..796594,797746..797841,800694..800847,802248..802351,803111..803176,805820..805955,808321..808448,809470..809529,809899..810044,810997..811099,811747..811921,812249..812512,813049..813230,813757..813860,814494..814567,815438..815509,816370..816527,816602..816763,817659..817856,818650..818800,819173..819254,820563..820627,821465..821515,822129..822232,823961..824089,824672..824779,825738..825818,828609..828698,830304..830423,836543..837219))
location: region:793317-837219:-1
so has part: feature:836543-837219:-1:exon
so has part: feature:830304-830423:-1:exon
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 10
SIO_000628: feature:819173-819254:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:818650-818800:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:817659-817856:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:816602-816763:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:816370-816527:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:815438-815509:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:814494-814567:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:813757-813860:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:813049-813230:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:812249-812512:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:811747-811921:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:810997-811099:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:809899-810044:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:809470-809529:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:808321-808448:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:805820-805955:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:803111-803176:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:802248-802351:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:800694-800847:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:797746-797841:-1:exon

position:797746:-1
position: 797746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797841:-1
position: 797841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:793317-796594:-1:exon

ATP11C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IG isoform X2
translation: MWSVWCAGEEKRVGTRTVLVGHRPVPDTEACLAQKFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVIVDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHRADNEVNKSNVFVVENAKQVRKESEKIKVGDIVEVKADETFPCDLIFLASSSTDGTCYVTTASLDGESNFKTHYAVRDTTVLCTDEAIDALTATIECEQPQPDLYKFVGRIIIYGSNQEPVARSLGPENLLLKGATLKNTKKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLCILLGKATVCTTLKYVWQSNPFNDEPWYNEKTKKERDTFKVLRMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKEMFDEEIQEGALVNTSDLNEELGQVEYVFTDKTGTLTENSMEFIECCIDGHKYRDCTSELDGFSQPDGPLKYYGRAEKSREELFLRALCLCHTVQIKEADQLDGLLAHPERRHTYISSSPDEIALVKGAEKYGFTFLGLENNFMKIRNQKNETEMYQLLHVLNFDPVRRRMSVIVRASTGKLLLFCKGADSSIFPRVQQEEIQQTKVHVDRNAMDGYRTLCVAFKELTEKEYDRIDRQLNEAKMALQDREEKMAKVFDDTEADMHLIGATAVEDRLQEQLAETIEALHAAGMKVWVLTGDKMETAKSTCYACRLFQTSTELLELTARTVGESERKEDRLHELLLEYHKKLIQDIPKNRGGLKSWTLSQEYGLIIDGSTLSLILNPSQDSGSSNYKSIFLQICLKCTAVLCCRMAPLQKAQIVRMVKNTKGSPITLSIGDGANDVSMILEAHVGIGIKGKEGRQASRNSDYAVPKFKHLRKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAYLTMYNICFTSLPILAYSLLEQHISIDTLTSDPQLYMKVSDNAMLQWRPFLYWTFLGAFEGLVFFFGVYFLFQNSSLEDNGKVFGNWTFGTIVFTVLVFTVTLKLALDTRFWTWMNHFVIWGSLAFYVFFSFFWGGVIWPFLKQQRMYFVFAHMLTSVSTWLAIILLIFISLFPEILLIVLKNIKEKNHQAGPFDLPVLVSYKRIENGYVKAEDAVTNLAERYPLRIP
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(796478..796594,800694..800847,802248..802351,803111..803176,805820..805955,808321..808448,809470..809529,809899..810044,810997..811099,811747..811918,812249..812512,813049..813230,813757..813860,814494..814567,815438..815509,816370..816527,816602..816763,817659..817856,818650..818800,819173..819254,820563..820627,821465..821515,822129..822232,823961..824089,824672..824779,825738..825818,828609..828698,830304..830423,836543..836557))
location: region:796478-836557:-1
so has part: feature:836543-836557:-1:exon
so has part: feature:830304-830423:-1:exon
so has part: feature:828609-828698:-1:exon
so has part: feature:825738-825818:-1:exon
so has part: feature:824672-824779:-1:exon
so has part: feature:823961-824089:-1:exon
so has part: feature:822129-822232:-1:exon
so has part: feature:821465-821515:-1:exon
so has part: feature:820563-820627:-1:exon
so has part: feature:819173-819254:-1:exon
so has part: feature:818650-818800:-1:exon
so has part: feature:817659-817856:-1:exon
so has part: feature:816602-816763:-1:exon
so has part: feature:816370-816527:-1:exon
so has part: feature:815438-815509:-1:exon
so has part: feature:814494-814567:-1:exon
so has part: feature:813757-813860:-1:exon
so has part: feature:813049-813230:-1:exon
so has part: feature:812249-812512:-1:exon
so has part: feature:811747-811918:-1:exon
so has part: feature:810997-811099:-1:exon
so has part: feature:809899-810044:-1:exon
so has part: feature:809470-809529:-1:exon
so has part: feature:808321-808448:-1:exon
so has part: feature:805820-805955:-1:exon
so has part: feature:803111-803176:-1:exon
so has part: feature:802248-802351:-1:exon
so has part: feature:800694-800847:-1:exon
so has part: feature:796478-796594:-1:exon

XP_021384173.1
type: Protein
SIO_000068: ncbiprotein

position:796478:-1
position: 796478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:836557:-1
position: 836557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:836543-836557:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:830304-830423:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:828609-828698:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:825738-825818:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:824672-824779:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:823961-824089:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:822129-822232:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:821465-821515:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:820563-820627:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:819173-819254:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:818650-818800:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:817659-817856:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:816602-816763:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:816370-816527:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:815438-815509:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:814494-814567:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:813757-813860:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:813049-813230:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:812249-812512:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:811747-811918:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:810997-811099:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:809899-810044:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:809470-809529:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:808321-808448:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:805820-805955:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:803111-803176:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:802248-802351:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:800694-800847:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:796478-796594:-1:exon

ATP11C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IG isoform X1
translation: MWSVWCAGEEKRVGTRTVLVGHRPVPDTEACLAQKFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVIVDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHRADNEVNKSNVFVVENAKQVRKESEKIKVGDIVEVKADETFPCDLIFLASSSTDGTCYVTTASLDGESNFKTHYAVRDTTVLCTDEAIDALTATIECEQPQPDLYKFVGRIIIYGSNQEPVARSLGPENLLLKGATLKNTKKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLCILLGKATVCTTLKYVWQSNPFNDEPWYNEKTKKERDTFKVLRMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKEMFDEEIQEGALVNTSDLNEELGQVEYVFTDKTGTLTENSMEFIECCIDGHKYRDCTSELDGFSQPDGPLKYYGRAEKSREELFLRALCLCHTVQIKEADQLDGLLAHPERRHTYISSSPDEIALVKGAEKYGFTFLGLENNFMKIRNQKNETEMYQLLHVLNFDPVRRRMSVIVRASTGKLLLFCKGADSSIFPRVQQEEIQQTKVHVDRNAMDGYRTLCVAFKELTEKEYDRIDRQLNEAKMALQDREEKMAKVFDDTEADMHLIGATAVEDRLQEQLAETIEALHAAGMKVWVLTGDKMETAKSTCYACRLFQTSTELLELTARTVGESERKEDRLHELLLEYHKKLIQDIPKNRGGLKRSWTLSQEYGLIIDGSTLSLILNPSQDSGSSNYKSIFLQICLKCTAVLCCRMAPLQKAQIVRMVKNTKGSPITLSIGDGANDVSMILEAHVGIGIKGKEGRQASRNSDYAVPKFKHLRKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAYLTMYNICFTSLPILAYSLLEQHISIDTLTSDPQLYMKVSDNAMLQWRPFLYWTFLGAFEGLVFFFGVYFLFQNSSLEDNGKVFGNWTFGTIVFTVLVFTVTLKLALDTRFWTWMNHFVIWGSLAFYVFFSFFWGGVIWPFLKQQRMYFVFAHMLTSVSTWLAIILLIFISLFPEILLIVLKNIKEKNHQAGPFDLPVLVSYKRIENGYVKAEDAVTNLAERYPLRIP
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(796478..796594,800694..800847,802248..802351,803111..803176,805820..805955,808321..808448,809470..809529,809899..810044,810997..811099,811747..811921,812249..812512,813049..813230,813757..813860,814494..814567,815438..815509,816370..816527,816602..816763,817659..817856,818650..818800,819173..819254,820563..820627,821465..821515,822129..822232,823961..824089,824672..824779,825738..825818,828609..828698,830304..830423,836543..836557))
location: region:796478-836557:-1
so has part: feature:836543-836557:-1:exon
so has part: feature:830304-830423:-1:exon
so has part: feature:828609-828698:-1:exon
so has part: feature:825738-825818:-1:exon
so has part: feature:824672-824779:-1:exon
so has part: feature:823961-824089:-1:exon
so has part: feature:822129-822232:-1:exon
so has part: feature:821465-821515:-1:exon
so has part: feature:820563-820627:-1:exon
so has part: feature:819173-819254:-1:exon
so has part: feature:818650-818800:-1:exon
so has part: feature:817659-817856:-1:exon
so has part: feature:816602-816763:-1:exon
so has part: feature:816370-816527:-1:exon
so has part: feature:815438-815509:-1:exon
so has part: feature:814494-814567:-1:exon
so has part: feature:813757-813860:-1:exon
so has part: feature:813049-813230:-1:exon
so has part: feature:812249-812512:-1:exon
so has part: feature:811747-811921:-1:exon
so has part: feature:810997-811099:-1:exon
so has part: feature:809899-810044:-1:exon
so has part: feature:809470-809529:-1:exon
so has part: feature:808321-808448:-1:exon
so has part: feature:805820-805955:-1:exon
so has part: feature:803111-803176:-1:exon
so has part: feature:802248-802351:-1:exon
so has part: feature:800694-800847:-1:exon
so has part: feature:796478-796594:-1:exon

XP_021384172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:836543-836557:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:830304-830423:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:828609-828698:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:825738-825818:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:824672-824779:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:823961-824089:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:822129-822232:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:821465-821515:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:820563-820627:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:819173-819254:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:818650-818800:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:817659-817856:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:816602-816763:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:816370-816527:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:815438-815509:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:814494-814567:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:813757-813860:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:813049-813230:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:812249-812512:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:811747-811921:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:810997-811099:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:809899-810044:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:809470-809529:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:808321-808448:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:805820-805955:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:803111-803176:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:802248-802351:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:800694-800847:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:796478-796594:-1:exon

ATP11C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ATP11C
product: ATPase phospholipid transporting 11C, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021528500.2
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(796490..796594,798672..798762,800694..800847,802248..802351,803111..803176,805820..805955,808321..808448,809470..809529,809899..810044,810997..811099,811747..811921,812249..812512,813049..813230,813757..813860,814494..814567,815438..815509,816370..816527,816602..816763,817659..817856,818650..818800,819173..819254,820563..820627,821465..821515,822129..822232,823961..824089,824672..824779,825738..825818,828609..828698,830304..830423,836543..837219))
location: region:796490-837219:-1
so has part: feature:836543-837219:-1:exon
so has part: feature:830304-830423:-1:exon
so has part: feature:828609-828698:-1:exon
so has part: feature:825738-825818:-1:exon
so has part: feature:824672-824779:-1:exon
so has part: feature:823961-824089:-1:exon
so has part: feature:822129-822232:-1:exon
so has part: feature:821465-821515:-1:exon
so has part: feature:820563-820627:-1:exon
so has part: feature:819173-819254:-1:exon
so has part: feature:818650-818800:-1:exon
so has part: feature:817659-817856:-1:exon
so has part: feature:816602-816763:-1:exon
so has part: feature:816370-816527:-1:exon
so has part: feature:815438-815509:-1:exon
so has part: feature:814494-814567:-1:exon
so has part: feature:813757-813860:-1:exon
so has part: feature:813049-813230:-1:exon
so has part: feature:812249-812512:-1:exon
so has part: feature:811747-811921:-1:exon
so has part: feature:810997-811099:-1:exon
so has part: feature:809899-810044:-1:exon
so has part: feature:809470-809529:-1:exon
so has part: feature:808321-808448:-1:exon
so has part: feature:805820-805955:-1:exon
so has part: feature:803111-803176:-1:exon
so has part: feature:802248-802351:-1:exon
so has part: feature:800694-800847:-1:exon
so has part: feature:798672-798762:-1:exon
so has part: feature:796490-796594:-1:exon

position:796490:-1
position: 796490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:836543-837219:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:830304-830423:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:828609-828698:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:825738-825818:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:824672-824779:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:823961-824089:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:822129-822232:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:821465-821515:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:820563-820627:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:819173-819254:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:818650-818800:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:817659-817856:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:816602-816763:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:816370-816527:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:815438-815509:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:814494-814567:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:813757-813860:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:813049-813230:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:812249-812512:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:811747-811921:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:810997-811099:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:809899-810044:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:809470-809529:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:808321-808448:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:805820-805955:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:803111-803176:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:802248-802351:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:800694-800847:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:798672-798762:-1:exon

position:798672:-1
position: 798672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798762:-1
position: 798762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:796490-796594:-1:exon

ATP11C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IG isoform X3
translation: MWSVWCAGEEKRVGTRTVLVGHRPVPDTEACLAQKFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVIVDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHRADNEVNKSNVFVVENAKQVRKESEKIKVGDIVEVKADETFPCDLIFLASSSTDGTCYVTTASLDGESNFKTHYAVRDTTVLCTDEAIDALTATIECEQPQPDLYKFVGRIIIYGSNQEPVARSLGPENLLLKGATLKNTKKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLCILLGKATVCTTLKYVWQSNPFNDEPWYNEKTKKERDTFKVLRMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKEMFDEEIQEGALVNTSDLNEELGQVEYVFTDKTGTLTENSMEFIECCIDGHKYRDCTSELDGFSQPDGPLKYYGRAEKSREELFLRALCLCHTVQIKEADQLDGLLAHPERRHTYISSSPDEIALVKGAEKYGFTFLGLENNFMKIRNQKNETEMYQLLHVLNFDPVRRRMSVIVRASTGKLLLFCKGADSSIFPRVQQEEIQQTKVHVDRNAMDGYRTLCVAFKELTEKEYDRIDRQLNEAKMALQDREEKMAKVFDDTEADMHLIGATAVEDRLQEQLAETIEALHAAGMKVWVLTGDKMETAKSTCYACRLFQTSTELLELTARTVGESERKEDRLHELLLEYHKKLIQDIPKNRGGLKRSWTLSQEYGLIIDGSTLSLILNPSQDSGSSNYKSIFLQICLKCTAVLCCRMAPLQKAQIVRMVKNTKGSPITLSIGDGANDVSMILEAHVGIGIKGKEGRQASRNSDYAVPKFKHLRKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAYLTMYNICFTSLPILAYSLLEQHISIDTLTSDPQLYMKVSDNAMLQWRPFLYWTFLGAFEGLVFFFGVYFLFQNSSLEDNGKVFGNWTFGTIVFTVLVFTVTLKLALDTRFWTWMNHFVIWGSLAFYVFFSFFWGGVIWPFLKQQRMYFVFAHMLTSVSTWLAIILLIFISLFPEILLIVLKNIKEKNHQSSRKAPDSLSARPSATPLLLRTFSDESNVL
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(797749..797841,800694..800847,802248..802351,803111..803176,805820..805955,808321..808448,809470..809529,809899..810044,810997..811099,811747..811921,812249..812512,813049..813230,813757..813860,814494..814567,815438..815509,816370..816527,816602..816763,817659..817856,818650..818800,819173..819254,820563..820627,821465..821515,822129..822232,823961..824089,824672..824779,825738..825818,828609..828698,830304..830423,836543..836557))
location: region:797749-836557:-1
so has part: feature:836543-836557:-1:exon
so has part: feature:830304-830423:-1:exon
so has part: feature:828609-828698:-1:exon
so has part: feature:825738-825818:-1:exon
so has part: feature:824672-824779:-1:exon
so has part: feature:823961-824089:-1:exon
so has part: feature:822129-822232:-1:exon
so has part: feature:821465-821515:-1:exon
so has part: feature:820563-820627:-1:exon
so has part: feature:819173-819254:-1:exon
so has part: feature:818650-818800:-1:exon
so has part: feature:817659-817856:-1:exon
so has part: feature:816602-816763:-1:exon
so has part: feature:816370-816527:-1:exon
so has part: feature:815438-815509:-1:exon
so has part: feature:814494-814567:-1:exon
so has part: feature:813757-813860:-1:exon
so has part: feature:813049-813230:-1:exon
so has part: feature:812249-812512:-1:exon
so has part: feature:811747-811921:-1:exon
so has part: feature:810997-811099:-1:exon
so has part: feature:809899-810044:-1:exon
so has part: feature:809470-809529:-1:exon
so has part: feature:808321-808448:-1:exon
so has part: feature:805820-805955:-1:exon
so has part: feature:803111-803176:-1:exon
so has part: feature:802248-802351:-1:exon
so has part: feature:800694-800847:-1:exon
so has part: feature:797749-797841:-1:exon

XP_021384174.1
type: Protein
SIO_000068: ncbiprotein

position:797749:-1
position: 797749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:836543-836557:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:830304-830423:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:828609-828698:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:825738-825818:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:824672-824779:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:823961-824089:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:822129-822232:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:821465-821515:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:820563-820627:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:819173-819254:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:818650-818800:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:817659-817856:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:816602-816763:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:816370-816527:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:815438-815509:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:814494-814567:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:813757-813860:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:813049-813230:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:812249-812512:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:811747-811921:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:810997-811099:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:809899-810044:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:809470-809529:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:808321-808448:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:805820-805955:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:803111-803176:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:802248-802351:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:800694-800847:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:797749-797841:-1:exon

ATP11C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IG isoform X4
translation: MWSVWCAGEEKRVGTRTVLVGHRPVPDTEACLAQKFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVIVDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHRADNEVNKSNVFVVENAKQVRKESEKIKVGDIVEVKADETFPCDLIFLASSSTDGTCYVTTASLDGESNFKTHYAVRDTTVLCTDEAIDALTATIECEQPQPDLYKFVGRIIIYGSNQEPVARSLGPENLLLKGATLKNTKKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLCILLGKATVCTTLKYVWQSNPFNDEPWYNEKTKKERDTFKVLRMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKEMFDEEIQEGALVNTSDLNEELGQVEYVFTDKTGTLTENSMEFIECCIDGHKYRDCTSELDGFSQPDGPLKYYGRAEKSREELFLRALCLCHTVQIKEADQLDGLLAHPERRHTYISSSPDEIALVKGAEKYGFTFLGLENNFMKIRNQKNETEMYQLLHVLNFDPVRRRMSVIVRASTGKLLLFCKGADSSIFPRVQQEEIQQTKVHVDRNAMDGYRTLCVAFKELTEKEYDRIDRQLNEAKMALQDREEKMAKVFDDTEADMHLIGATAVEDRLQEQLAETIEALHAAGMKVWVLTGDKMETAKSTCYACRLFQTSTELLELTARTVGESERKEDRLHELLLEYHKKLIQDIPKNRGGLKRSWTLSQEYGLIIDGSTLSLILNPSQDSGSSNYKSIFLQICLKCTAVLCCRMAPLQKAQIVRMVKNTKGSPITLSIGDGANDVSMILEAHVGIGIKGKEGRQASRNSDYAVPKFKHLRKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAYLTMYNICFTSLPILAYSLLEQHISIDTLTSDPQLYMKVSDNAMLQWRPFLYWTFLGAFEGLVFFFGVYFLFQNSSLEDNGKVFGNWTFGTIVFTVLVFTVTLKLALDTRFWTWMNHFVIWGSLAFYVFFSFFWGGVIWPFLKQQRMYFVFAHMLTSVSTWLAIILLIFISLFPEILLIVLKNIKEKNHQVTKRLPSSGTSTIFMLSQTSSNHSFSWSE
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(798673..798762,800694..800847,802248..802351,803111..803176,805820..805955,808321..808448,809470..809529,809899..810044,810997..811099,811747..811921,812249..812512,813049..813230,813757..813860,814494..814567,815438..815509,816370..816527,816602..816763,817659..817856,818650..818800,819173..819254,820563..820627,821465..821515,822129..822232,823961..824089,824672..824779,825738..825818,828609..828698,830304..830423,836543..836557))
location: region:798673-836557:-1
so has part: feature:836543-836557:-1:exon
so has part: feature:830304-830423:-1:exon
so has part: feature:828609-828698:-1:exon
so has part: feature:825738-825818:-1:exon
so has part: feature:824672-824779:-1:exon
so has part: feature:823961-824089:-1:exon
so has part: feature:822129-822232:-1:exon
so has part: feature:821465-821515:-1:exon
so has part: feature:820563-820627:-1:exon
so has part: feature:819173-819254:-1:exon
so has part: feature:818650-818800:-1:exon
so has part: feature:817659-817856:-1:exon
so has part: feature:816602-816763:-1:exon
so has part: feature:816370-816527:-1:exon
so has part: feature:815438-815509:-1:exon
so has part: feature:814494-814567:-1:exon
so has part: feature:813757-813860:-1:exon
so has part: feature:813049-813230:-1:exon
so has part: feature:812249-812512:-1:exon
so has part: feature:811747-811921:-1:exon
so has part: feature:810997-811099:-1:exon
so has part: feature:809899-810044:-1:exon
so has part: feature:809470-809529:-1:exon
so has part: feature:808321-808448:-1:exon
so has part: feature:805820-805955:-1:exon
so has part: feature:803111-803176:-1:exon
so has part: feature:802248-802351:-1:exon
so has part: feature:800694-800847:-1:exon
so has part: feature:798673-798762:-1:exon

XP_021384175.1
type: Protein
SIO_000068: ncbiprotein

position:798673:-1
position: 798673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:836543-836557:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:830304-830423:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:828609-828698:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:825738-825818:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:824672-824779:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:823961-824089:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:822129-822232:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:821465-821515:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:820563-820627:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:819173-819254:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:818650-818800:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:817659-817856:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:816602-816763:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:816370-816527:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:815438-815509:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:814494-814567:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:813757-813860:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:813049-813230:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:812249-812512:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:811747-811921:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:810997-811099:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:809899-810044:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:809470-809529:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:808321-808448:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:805820-805955:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:803111-803176:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:802248-802351:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:800694-800847:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:798673-798762:-1:exon

ARL13A
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: ARL13A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(856162..860770)
location: region:856162-860770:-1
so has part: feature:856162-860770:-1:exon
subclass of: SO_0000010

110469611
type: Gene
SIO_000068: ncbigene

position:856162:-1
position: 856162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:860770:-1
position: 860770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:856162-860770:-1:exon

ARL13A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ARL13A
product: ADP ribosylation factor like GTPase 13A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031504764.1
SIO_010081: ARL13A
subclass of: SO_0000673
so part of: ARL13A
location: complement(join(856162..857427,857716..857817,858145..858319,858517..858645,858895..859000,859216..859465,859691..859761,860712..860770))
location: region:856162-860770:-1
so has part: feature:860712-860770:-1:exon
so has part: feature:859691-859761:-1:exon
so has part: feature:859216-859465:-1:exon
so has part: feature:858895-859000:-1:exon
so has part: feature:858517-858645:-1:exon
so has part: feature:858145-858319:-1:exon
so has part: feature:857716-857817:-1:exon
so has part: feature:856162-857427:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:860712-860770:-1:exon

position:860712:-1
position: 860712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:859691-859761:-1:exon

position:859691:-1
position: 859691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859761:-1
position: 859761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:859216-859465:-1:exon

position:859216:-1
position: 859216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859465:-1
position: 859465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:858895-859000:-1:exon

position:858895:-1
position: 858895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859000:-1
position: 859000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:858517-858645:-1:exon

position:858517:-1
position: 858517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:858645:-1
position: 858645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:858145-858319:-1:exon

position:858145:-1
position: 858145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:858319:-1
position: 858319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:857716-857817:-1:exon

position:857716:-1
position: 857716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:857817:-1
position: 857817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:856162-857427:-1:exon

position:857427:-1
position: 857427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARL13A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ARL13A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor-like protein 13A
translation: MFHLFSHCWSWLQAIQEPVRKVTLLVMGLDNAGKTSVIADMGAALAGEALPGAQPGRSRLRLDRFEVTLLELPGAQRSRSAWRSHYSEAQGLLFVLDSGDPARMEEARKVLSRVLSHPEVSGKPLLLLANKQDAAGALLPCELIERLCLERLVNEKRSPCRIRSPPQRCAPSRRHRPPPGEDAREGAGKSGEPRPERPVCRLLPPEESMKGPRRRKRKVKVKKKGSGQPSPAAELEAPGAGAAGGLLLPNRVGQEEPIPGPCPAQGMKKKKKKKIKNKIKSREPSLEQQREEISSTFDLYRRAMLALKMRQEQRKQPSAVAP
SIO_010081: ARL13A
subclass of: SO_0000673
so part of: ARL13A
location: complement(join(857351..857427,857716..857817,858145..858319,858517..858645,858895..859000,859216..859465,859691..859761,860712..860770))
location: region:857351-860770:-1
so has part: feature:860712-860770:-1:exon
so has part: feature:859691-859761:-1:exon
so has part: feature:859216-859465:-1:exon
so has part: feature:858895-859000:-1:exon
so has part: feature:858517-858645:-1:exon
so has part: feature:858145-858319:-1:exon
so has part: feature:857716-857817:-1:exon
so has part: feature:857351-857427:-1:exon

XP_031360624.1
type: Protein
SIO_000068: ncbiprotein

position:857351:-1
position: 857351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:860712-860770:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:859691-859761:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:859216-859465:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:858895-859000:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:858517-858645:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:858145-858319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:857716-857817:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:857351-857427:-1:exon

XKRX
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: XKRX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 868613..874387
location: region:868613-874387:1
so has part: feature:868613-874387:1:exon
subclass of: SO_0000010

110469610
type: Gene
SIO_000068: ncbigene

position:868613:1
position: 868613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874387:1
position: 874387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:868613-874387:1:exon

XKRX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: XKRX
product: XK related X-linked
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021528511.1
SIO_010081: XKRX
subclass of: SO_0000673
so part of: XKRX
location: join(868613..868905,871326..871585,873046..874387)
location: region:868613-874387:1
so has part: feature:868613-868905:1:exon
so has part: feature:871326-871585:1:exon
so has part: feature:873046-874387:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:868613-868905:1:exon

position:868905:1
position: 868905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:871326-871585:1:exon

position:871326:1
position: 871326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:871585:1
position: 871585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:873046-874387:1:exon

position:873046:1
position: 873046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

XKRX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: XKRX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: XK-related protein 2
translation: MDGPGGGCPPAAAPARAKLPLGIVFSTALFCGEGAAAAVLCLSYGHSDDRFWLALTVFFVLCPSVLVQLTLIFVHRDLSRDRPLVLLMHLLQLGPIIRCVEALVVYCWSGREEEPYVTITRKRRLRKGYEVEMEQEVGHSERRLATHRNAFKRMAVIQAFLGSTPQLTLQLYISVLEKYVPVARAVLMAICLVSVTYGALVCNILAIQVKYDDYKVQLRPLAFLCIVLWRSLEISTRIAVLVLFSTVFKHWIIPIALANLLVVFFLPWVQFWRSGNRLPDNVEKNFSRLGTVVVLCAFTLLYSSINMFCWSAVQLKLADRDLIDKSQNWGRLAVYYVARLAENTALVILWYFFKTDVYENVCTALLVLQLLLGYCLGIYFMLLFFQYLHPCRQLFRHNVADFLHCVCCRRHPPGTPLCLEAPQEPGVRHSIV
SIO_010081: XKRX
subclass of: SO_0000673
so part of: XKRX
location: join(868613..868905,871326..871585,873046..873791)
location: region:868613-873791:1
so has part: feature:868613-868905:1:exon
so has part: feature:871326-871585:1:exon
so has part: feature:873046-873791:1:exon

XP_021384186.1
type: Protein
SIO_000068: ncbiprotein

position:873791:1
position: 873791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:868613-868905:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:871326-871585:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:873046-873791:1:exon

NOX1
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: NOX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 875207..880112
location: region:875207-880112:1
so has part: feature:875207-880112:1:exon
subclass of: SO_0000010

110469597
type: Gene
SIO_000068: ncbigene

position:875207:1
position: 875207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880112:1
position: 880112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:875207-880112:1:exon

NOX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: NOX1
product: NADPH oxidase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021528494.2
SIO_010081: NOX1
subclass of: SO_0000673
so part of: NOX1
location: join(875207..875508,876474..876569,876957..877067,877147..877231,877307..877449,877527..877708,877906..878044,878140..878232,878377..878603,878683..878845,878932..879078,879289..879413,879593..880112)
location: region:875207-880112:1
so has part: feature:875207-875508:1:exon
so has part: feature:876474-876569:1:exon
so has part: feature:876957-877067:1:exon
so has part: feature:877147-877231:1:exon
so has part: feature:877307-877449:1:exon
so has part: feature:877527-877708:1:exon
so has part: feature:877906-878044:1:exon
so has part: feature:878140-878232:1:exon
so has part: feature:878377-878603:1:exon
so has part: feature:878683-878845:1:exon
so has part: feature:878932-879078:1:exon
so has part: feature:879289-879413:1:exon
so has part: feature:879593-880112:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:875207-875508:1:exon

position:875508:1
position: 875508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:876474-876569:1:exon

position:876474:1
position: 876474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:876569:1
position: 876569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:876957-877067:1:exon

position:876957:1
position: 876957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877067:1
position: 877067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:877147-877231:1:exon

position:877147:1
position: 877147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877231:1
position: 877231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:877307-877449:1:exon

position:877307:1
position: 877307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877449:1
position: 877449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:877527-877708:1:exon

position:877527:1
position: 877527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877708:1
position: 877708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:877906-878044:1:exon

position:877906:1
position: 877906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:878044:1
position: 878044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:878140-878232:1:exon

position:878140:1
position: 878140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:878232:1
position: 878232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:878377-878603:1:exon

position:878377:1
position: 878377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:878603:1
position: 878603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:878683-878845:1:exon

position:878683:1
position: 878683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:878845:1
position: 878845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:878932-879078:1:exon

position:878932:1
position: 878932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879078:1
position: 879078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:879289-879413:1:exon

position:879289:1
position: 879289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879413:1
position: 879413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:879593-880112:1:exon

position:879593:1
position: 879593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NOX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: NOX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADPH oxidase 1
translation: MGSWLVNHWLSAAVLAAWLGINIFLFTYYFLFFDRDERYFYTRAILGSALAWARASAKCLNFNSMLILLPVCRNLLSFLRGTCSCCRRTLRKQLDHNLTFHKLVAYTLALLTAVHTIAHLFNLERYNQSQRATDGSLPAVLSKVHLQGSKWLNPIHSNQTTVEYVAFTTIPGLTGVIITLALILMVTSSTEFIRRNYFELFWYTHHLFLVYFAGLVIHGIAGLVRGQTEQSMAEVPPYHCAEYLTQREQNCTHSCCKDPEFGSIPAESWKWVLAPIILYVFERILRVWRAQQKVLVTKVVMHPARVLELQMQKKGFCMEVGQYIFVNCPAISSLEWHPFTLTSAPEEDFFSIHVRAAGDWTERLIDTFQLEIPRVEVDGPFGTASEDVFQYEVAMLVGAGIGVTPFASILKSIWYKFQQADQTLKTKKIYFYWLCRDTGAFAWFNDLLASLEQKMAESGKADFLTYRLFLTGWDTSIANNVALRFDTATDTVTGLRHKTIFGRPMWNTEFAAVAAAHPRSVVGVFLCGPEALAKSLQKSCHQHSSLDPRKVKFYFNKENF
SIO_010081: NOX1
subclass of: SO_0000673
so part of: NOX1
location: join(875464..875508,876474..876569,876957..877067,877147..877231,877307..877449,877527..877708,877906..878044,878140..878232,878377..878603,878683..878845,878932..879078,879289..879413,879593..879719)
location: region:875464-879719:1
so has part: feature:875464-875508:1:exon
so has part: feature:876474-876569:1:exon
so has part: feature:876957-877067:1:exon
so has part: feature:877147-877231:1:exon
so has part: feature:877307-877449:1:exon
so has part: feature:877527-877708:1:exon
so has part: feature:877906-878044:1:exon
so has part: feature:878140-878232:1:exon
so has part: feature:878377-878603:1:exon
so has part: feature:878683-878845:1:exon
so has part: feature:878932-879078:1:exon
so has part: feature:879289-879413:1:exon
so has part: feature:879593-879719:1:exon

XP_021384169.1
type: Protein
SIO_000068: ncbiprotein

position:875464:1
position: 875464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879719:1
position: 879719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:875464-875508:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:876474-876569:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:876957-877067:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:877147-877231:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:877307-877449:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:877527-877708:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:877906-878044:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:878140-878232:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:878377-878603:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:878683-878845:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:878932-879078:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:879289-879413:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:879593-879719:1:exon

CSTF2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: CSTF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(880747..887701)
location: region:880747-887701:-1
so has part: feature:880747-887701:-1:exon
subclass of: SO_0000010

110469595
type: Gene
SIO_000068: ncbigene

position:880747:-1
position: 880747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887701:-1
position: 887701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880747-887701:-1:exon

CSTF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: CSTF2
product: cleavage stimulation factor subunit 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021528488.2
SIO_010081: CSTF2
subclass of: SO_0000673
so part of: CSTF2
location: complement(join(880747..880927,881049..881174,881316..881441,881791..882068,882370..882521,882888..883029,883638..883697,885110..885233,885351..885506,885602..885721,885829..885965,886423..886592,887387..887465,887591..887701))
location: region:880747-887701:-1
so has part: feature:887591-887701:-1:exon
so has part: feature:887387-887465:-1:exon
so has part: feature:886423-886592:-1:exon
so has part: feature:885829-885965:-1:exon
so has part: feature:885602-885721:-1:exon
so has part: feature:885351-885506:-1:exon
so has part: feature:885110-885233:-1:exon
so has part: feature:883638-883697:-1:exon
so has part: feature:882888-883029:-1:exon
so has part: feature:882370-882521:-1:exon
so has part: feature:881791-882068:-1:exon
so has part: feature:881316-881441:-1:exon
so has part: feature:881049-881174:-1:exon
so has part: feature:880747-880927:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:887591-887701:-1:exon

position:887591:-1
position: 887591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:887387-887465:-1:exon

position:887387:-1
position: 887387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887465:-1
position: 887465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:886423-886592:-1:exon

position:886423:-1
position: 886423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886592:-1
position: 886592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:885829-885965:-1:exon

position:885829:-1
position: 885829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885965:-1
position: 885965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:885602-885721:-1:exon

position:885602:-1
position: 885602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885721:-1
position: 885721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:885351-885506:-1:exon

position:885351:-1
position: 885351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885506:-1
position: 885506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:885110-885233:-1:exon

position:885110:-1
position: 885110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885233:-1
position: 885233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:883638-883697:-1:exon

position:883638:-1
position: 883638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:883697:-1
position: 883697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:882888-883029:-1:exon

position:882888:-1
position: 882888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:883029:-1
position: 883029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:882370-882521:-1:exon

position:882370:-1
position: 882370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:882521:-1
position: 882521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:881791-882068:-1:exon

position:881791:-1
position: 881791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:882068:-1
position: 882068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:881316-881441:-1:exon

position:881316:-1
position: 881316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:881441:-1
position: 881441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:881049-881174:-1:exon

position:881049:-1
position: 881049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:881174:-1
position: 881174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:880747-880927:-1:exon

position:880927:-1
position: 880927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CSTF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: CSTF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleavage stimulation factor subunit 2
translation: MAGLSVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVNPEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQTSVPPLIPGNQQAVPGPGPGPGPGPGPGPNAQLNPQNTPSSQPQPIGGMHVNGAPPLMQPPMQGGVPAPGQMAAPVQGPGPGPMAPGGNLQLSPVGPARPASIERVQVPMPDPRAPMQRGPLPASGPPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGAPMHHMPGHDSRGPPHEMRGGPMGEPRPLMGEPRGPLMDARVGRDPRGLEPRGLEPRGLEPRVMEARALEARGLEPRVLEPRVLEARAMEARVLEPRGLEPRGPGPNPRGPMPGGIQGPGPLNMGASGPQGPRQVPNMAGAGMQGGGIPGAGVQGTGQPGGFSPGQSQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
SIO_010081: CSTF2
subclass of: SO_0000673
so part of: CSTF2
location: complement(join(881052..881174,881316..881441,881791..882068,882370..882521,882888..883029,883638..883697,885110..885233,885351..885506,885602..885721,885829..885965,886423..886592,887387..887465,887591..887648))
location: region:881052-887648:-1
so has part: feature:887591-887648:-1:exon
so has part: feature:887387-887465:-1:exon
so has part: feature:886423-886592:-1:exon
so has part: feature:885829-885965:-1:exon
so has part: feature:885602-885721:-1:exon
so has part: feature:885351-885506:-1:exon
so has part: feature:885110-885233:-1:exon
so has part: feature:883638-883697:-1:exon
so has part: feature:882888-883029:-1:exon
so has part: feature:882370-882521:-1:exon
so has part: feature:881791-882068:-1:exon
so has part: feature:881316-881441:-1:exon
so has part: feature:881052-881174:-1:exon

XP_021384163.1
type: Protein
SIO_000068: ncbiprotein

position:881052:-1
position: 881052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887648:-1
position: 887648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:887591-887648:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:887387-887465:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:886423-886592:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:885829-885965:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:885602-885721:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:885351-885506:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:885110-885233:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:883638-883697:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:882888-883029:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:882370-882521:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:881791-882068:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:881316-881441:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:881052-881174:-1:exon

TRMT12
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TRMT12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 887925..891305
location: region:887925-891305:1
so has part: feature:887925-891305:1:exon
subclass of: SO_0000010

110469608
type: Gene
SIO_000068: ncbigene

position:887925:1
position: 887925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:891305:1
position: 891305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:887925-891305:1:exon

TRMT12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TRMT12
product: tRNA methyltransferase 12 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021528510.2
SIO_010081: TRMT12
subclass of: SO_0000673
so part of: TRMT12
location: join(887925..888140,888252..888664,889198..889348,889419..889528,890152..890309,890377..891305)
location: region:887925-891305:1
so has part: feature:887925-888140:1:exon
so has part: feature:888252-888664:1:exon
so has part: feature:889198-889348:1:exon
so has part: feature:889419-889528:1:exon
so has part: feature:890152-890309:1:exon
so has part: feature:890377-891305:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:887925-888140:1:exon

position:888140:1
position: 888140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:888252-888664:1:exon

position:888252:1
position: 888252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:888664:1
position: 888664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:889198-889348:1:exon

position:889198:1
position: 889198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:889348:1
position: 889348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:889419-889528:1:exon

position:889419:1
position: 889419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:889528:1
position: 889528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:890152-890309:1:exon

position:890152:1
position: 890152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890309:1
position: 890309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:890377-891305:1:exon

position:890377:1
position: 890377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRMT12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TRMT12
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:888439..888441,aa:OTHER)
product: LOW QUALITY PROTEIN: tRNA wybutosine-synthesizing protein 2 homolog
translation: MAAAEVPALATERRFAQRLRECLEEERLLDGRYRLQRLPGGRVAVPVLEEKLSQLCLPAEMPCELLRIQVGTAGRLRAPGAVXAPGPRGTALPQDAVPSRAARRRPPARRLLQELRRLLPAGWPAELERDLPHAWQRHGDLVLLSEDSFSHPAWERLGPELWETVASALGARRVARRGRVMPDGMRTPSVTLLLGQHGWVERVDNGIRYTFDVTKCMFSPGNITEKLRVASLPCSGEVVVDLYAGIGYFTLPFLVHAGAAFVHACEWNSHAVEALHRSLVLNGVRDRCRIHGGDSRQLQLRDVADRVNLGLLPSSEEGWPVACRVLKKDTGGVLHIHQNVEARPAHAAVLLAERGSAEAASSAGEAWHSVEHSEQEALGARLRPEWQRWAAATAARIQGLLAELHGRPWCCSVLHIEAVKSYAPHVHHLVLDLECRPVLPV
SIO_010081: TRMT12
subclass of: SO_0000673
so part of: TRMT12
location: join(888082..888140,888252..888664,889198..889348,889419..889528,890152..890309,890377..890811)
location: region:888082-890811:1
so has part: feature:888082-888140:1:exon
so has part: feature:888252-888664:1:exon
so has part: feature:889198-889348:1:exon
so has part: feature:889419-889528:1:exon
so has part: feature:890152-890309:1:exon
so has part: feature:890377-890811:1:exon

XP_021384185.1
type: Protein
SIO_000068: ncbiprotein

position:888082:1
position: 888082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890811:1
position: 890811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:888082-888140:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:888252-888664:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:889198-889348:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:889419-889528:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:890152-890309:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:890377-890811:1:exon

SYTL4
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SYTL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 892109..899121
location: region:892109-899121:1
so has part: feature:892109-899121:1:exon
subclass of: SO_0000010

110469607
type: Gene
SIO_000068: ncbigene

position:892109:1
position: 892109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:899121:1
position: 899121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:892109-899121:1:exon

SYTL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SYTL4
product: synaptotagmin like 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021528508.2
SIO_010081: SYTL4
subclass of: SO_0000673
so part of: SYTL4
location: join(892109..892147,892906..893053,893193..893408,893914..894023,894182..894296,894458..894565,894817..894931,895038..895128,895288..895391,895484..895570,895834..896012,896201..896303,897130..897291,897705..897810,898201..898300,898535..898743,898848..899121)
location: region:892109-899121:1
so has part: feature:892109-892147:1:exon
so has part: feature:892906-893053:1:exon
so has part: feature:893193-893408:1:exon
so has part: feature:893914-894023:1:exon
so has part: feature:894182-894296:1:exon
so has part: feature:894458-894565:1:exon
so has part: feature:894817-894931:1:exon
so has part: feature:895038-895128:1:exon
so has part: feature:895288-895391:1:exon
so has part: feature:895484-895570:1:exon
so has part: feature:895834-896012:1:exon
so has part: feature:896201-896303:1:exon
so has part: feature:897130-897291:1:exon
so has part: feature:897705-897810:1:exon
so has part: feature:898201-898300:1:exon
so has part: feature:898535-898743:1:exon
so has part: feature:898848-899121:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:892109-892147:1:exon

position:892147:1
position: 892147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:892906-893053:1:exon

position:892906:1
position: 892906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:893053:1
position: 893053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:893193-893408:1:exon

position:893193:1
position: 893193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:893408:1
position: 893408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:893914-894023:1:exon

position:893914:1
position: 893914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:894023:1
position: 894023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:894182-894296:1:exon

position:894182:1
position: 894182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:894296:1
position: 894296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:894458-894565:1:exon

position:894458:1
position: 894458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:894565:1
position: 894565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:894817-894931:1:exon

position:894817:1
position: 894817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:894931:1
position: 894931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:895038-895128:1:exon

position:895038:1
position: 895038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895128:1
position: 895128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:895288-895391:1:exon

position:895288:1
position: 895288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895391:1
position: 895391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:895484-895570:1:exon

position:895484:1
position: 895484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895570:1
position: 895570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:895834-896012:1:exon

position:895834:1
position: 895834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:896012:1
position: 896012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:896201-896303:1:exon

position:896201:1
position: 896201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:896303:1
position: 896303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:897130-897291:1:exon

position:897130:1
position: 897130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:897291:1
position: 897291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:897705-897810:1:exon

position:897705:1
position: 897705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:897810:1
position: 897810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:898201-898300:1:exon

position:898201:1
position: 898201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:898300:1
position: 898300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:898535-898743:1:exon

position:898535:1
position: 898535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:898743:1
position: 898743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:898848-899121:1:exon

position:898848:1
position: 898848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SYTL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SYTL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-like protein 4
translation: MSEAVDLSFLSDVERDLILQVLQRDEELRKAEERRIRRLKNELLEIRRKGAKRGSQRYSERTCARCQQSLGRVSPKANTCRGCNHLVCRDCRSYSPGGSWRCKVCTKEAELKKATGDWFYDQRVNRFANHLGSDMVRLSLRHRPAANKRETVGYTLLQKAQLSEPKSSSAVRQPSPPAPREGSSLFPDASDPRDGKSDTESMENMSLDSYKPSPADVGGRRNSLERAIPGKQVVGPAGPASSSLTLPLRSKNAFSDGRDATVGTRSSTLVDEHEMIFQKNPRRVVRPADYTKSVIDLRPEDLVGEGGSLGDRSKSVPGLNTELEEEEEDIDNLVEIHRQRVARGSMRSGTSSSTLGSMVSIYSEAGDFGSVAVTGGISFSLSYEQKTQTLFIHVKECRQLAYGDEGRKRSNPYVKTYLLPDKSRQGKRKTTIKRNTINPLYNELLKYEVNKSLLLARTLQFSVWHHDRFGRNTFLGEVEVPLGAWNFESHLEEFLPLHGKVGADIAGLHQYKGELVVSMKYIPSAKHPGAGNGRKGKTGEGGELQVWIKEAKNLTAAKSGGTSDSFVKGYLLPHKNKASKRKTPVVKKTLNPHYNHTFVYNGVSPEELQHICLELTVWDREPLSSNDFLGGVRLGVGTGVSNGQAVDWMDSTGEELNLWQKMCQYPGSWAEGTLQLRSSMAKLRP
SIO_010081: SYTL4
subclass of: SO_0000673
so part of: SYTL4
location: join(892944..893053,893193..893408,893914..894023,894182..894296,894458..894565,894817..894931,895038..895128,895288..895391,895484..895570,895834..896012,896201..896303,897130..897291,897705..897810,898201..898300,898535..898743,898848..898990)
location: region:892944-898990:1
so has part: feature:892944-893053:1:exon
so has part: feature:893193-893408:1:exon
so has part: feature:893914-894023:1:exon
so has part: feature:894182-894296:1:exon
so has part: feature:894458-894565:1:exon
so has part: feature:894817-894931:1:exon
so has part: feature:895038-895128:1:exon
so has part: feature:895288-895391:1:exon
so has part: feature:895484-895570:1:exon
so has part: feature:895834-896012:1:exon
so has part: feature:896201-896303:1:exon
so has part: feature:897130-897291:1:exon
so has part: feature:897705-897810:1:exon
so has part: feature:898201-898300:1:exon
so has part: feature:898535-898743:1:exon
so has part: feature:898848-898990:1:exon

XP_021384183.1
type: Protein
SIO_000068: ncbiprotein

position:892944:1
position: 892944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:898990:1
position: 898990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:892944-893053:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:893193-893408:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:893914-894023:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:894182-894296:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:894458-894565:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:894817-894931:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:895038-895128:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:895288-895391:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:895484-895570:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:895834-896012:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:896201-896303:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:897130-897291:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:897705-897810:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:898201-898300:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:898535-898743:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:898848-898990:1:exon

SRPX2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SRPX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(900050..905068)
location: region:900050-905068:-1
so has part: feature:900050-905068:-1:exon
subclass of: SO_0000010

110469606
type: Gene
SIO_000068: ncbigene

position:900050:-1
position: 900050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:905068:-1
position: 905068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:900050-905068:-1:exon

SRPX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SRPX2
product: sushi repeat containing protein X-linked 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 45% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021528507.2
SIO_010081: SRPX2
subclass of: SO_0000673
so part of: SRPX2
location: complement(join(900050..900230,900518..900639,900715..900848,900970..901149,901556..901677,901778..901904,902208..902384,902494..902685,902765..902848,904612..905068))
location: region:900050-905068:-1
so has part: feature:904612-905068:-1:exon
so has part: feature:902765-902848:-1:exon
so has part: feature:902494-902685:-1:exon
so has part: feature:902208-902384:-1:exon
so has part: feature:901778-901904:-1:exon
so has part: feature:901556-901677:-1:exon
so has part: feature:900970-901149:-1:exon
so has part: feature:900715-900848:-1:exon
so has part: feature:900518-900639:-1:exon
so has part: feature:900050-900230:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:904612-905068:-1:exon

position:904612:-1
position: 904612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:902765-902848:-1:exon

position:902765:-1
position: 902765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:902848:-1
position: 902848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:902494-902685:-1:exon

position:902494:-1
position: 902494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:902685:-1
position: 902685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:902208-902384:-1:exon

position:902208:-1
position: 902208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:902384:-1
position: 902384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:901778-901904:-1:exon

position:901778:-1
position: 901778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901904:-1
position: 901904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:901556-901677:-1:exon

position:901556:-1
position: 901556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901677:-1
position: 901677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:900970-901149:-1:exon

position:900970:-1
position: 900970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901149:-1
position: 901149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:900715-900848:-1:exon

position:900715:-1
position: 900715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900848:-1
position: 900848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:900518-900639:-1:exon

position:900518:-1
position: 900518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900639:-1
position: 900639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:900050-900230:-1:exon

position:900230:-1
position: 900230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SRPX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SRPX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sushi repeat-containing protein SRPX2
translation: MFGMGSQVCSAPAERPGRRDRHLCGDKATEGAVILPPAALHPRQGWLAAAPGASTAGGLPSAAPRLPSMARQAAPVLLLVLARLVSSTWHEGSGYYLESHTNEVYAEEPPPEPALDYHRVPQWCATLRIHRGEAACYSPRGSSYRSSLGTRCELSCTRGYRLVGPSAVRCLPSRHWSGMAYCRQIRCHALPAVLRGSYACSAGVQMDSRCDYTCLPGYQLEGDRSRICMEDGRWSGSEPICVDLEPPKIRCPDSRERIAEPGKLTATVYWDPPRVRDSADGVIKRVLLQGPEPGSEFPEGEHVIRYTAHDQAYNRASCKFSIRVHVRRCPVLKPPQNGYISCTSDGNNYGATCEYLCDGGFEHQGTSLRVCQSSQQWTGSQPLCAPMQINTDVNSAASLLDQFHEKRRLLVISAPDPSNRYYKMQISMLQQAACGLDLRHVTTVELVGQPPHEVGRIREHRLSLGIIEELRRFLHLTRSHFNAVLLDKAGTDRERFISPVSPDELFVFIDTYLLGQREAARRAQGGDPCE
SIO_010081: SRPX2
subclass of: SO_0000673
so part of: SRPX2
location: complement(join(900050..900230,900518..900639,900715..900848,900970..901149,901556..901677,901778..901904,902208..902384,902494..902685,902765..902848,904612..904885))
location: region:900050-904885:-1
so has part: feature:904612-904885:-1:exon
so has part: feature:902765-902848:-1:exon
so has part: feature:902494-902685:-1:exon
so has part: feature:902208-902384:-1:exon
so has part: feature:901778-901904:-1:exon
so has part: feature:901556-901677:-1:exon
so has part: feature:900970-901149:-1:exon
so has part: feature:900715-900848:-1:exon
so has part: feature:900518-900639:-1:exon
so has part: feature:900050-900230:-1:exon

XP_021384182.2
type: Protein
SIO_000068: ncbiprotein

position:904885:-1
position: 904885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:904612-904885:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:902765-902848:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:902494-902685:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:902208-902384:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:901778-901904:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:901556-901677:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:900970-901149:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:900715-900848:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:900518-900639:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:900050-900230:-1:exon

TSPAN6
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TSPAN6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 906511..911536
location: region:906511-911536:1
so has part: feature:906511-911536:1:exon
subclass of: SO_0000010

110469605
type: Gene
SIO_000068: ncbigene

position:906511:1
position: 906511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:911536:1
position: 911536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:906511-911536:1:exon

TSPAN6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TSPAN6
product: tetraspanin 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021528505.1
SIO_010081: TSPAN6
subclass of: SO_0000673
so part of: TSPAN6
location: join(906511..906821,906916..907104,907319..907393,907946..908044,908336..908491,909137..909220,910892..910990,911190..911536)
location: region:906511-911536:1
so has part: feature:906511-906821:1:exon
so has part: feature:906916-907104:1:exon
so has part: feature:907319-907393:1:exon
so has part: feature:907946-908044:1:exon
so has part: feature:908336-908491:1:exon
so has part: feature:909137-909220:1:exon
so has part: feature:910892-910990:1:exon
so has part: feature:911190-911536:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:906511-906821:1:exon

position:906821:1
position: 906821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:906916-907104:1:exon

position:906916:1
position: 906916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:907104:1
position: 907104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:907319-907393:1:exon

position:907319:1
position: 907319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:907393:1
position: 907393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:907946-908044:1:exon

position:907946:1
position: 907946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:908044:1
position: 908044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:908336-908491:1:exon

position:908336:1
position: 908336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:908491:1
position: 908491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:909137-909220:1:exon

position:909137:1
position: 909137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:909220:1
position: 909220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:910892-910990:1:exon

position:910892:1
position: 910892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:910990:1
position: 910990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:911190-911536:1:exon

position:911190:1
position: 911190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TSPAN6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TSPAN6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-6
translation: MASPSRRLQTKPVITCLKSVLLTYTFVFWVSGIVLLAVGIWGRVSLAVYFSLLDEKATNVPFVLVGAGTVVVLLGTFGCFATCRGSTWMLKLYAMLLSLIFLIVLVAAIVGFVFRHEIQTSFESNLELALKDYNVTADQHSKAVDTIQRTLHCCGVQNYSDWERTEYFSQRGIPHSCCKNQNDCSEEDLKDPNKAKLKVFVDGCFFLVTSTMESKMSVVAGISFGIACFQLIGIILSCCLSRYITNNQYEMV
SIO_010081: TSPAN6
subclass of: SO_0000673
so part of: TSPAN6
location: join(906735..906821,906916..907104,907319..907393,907946..908044,908336..908491,909137..909220,910892..910960)
location: region:906735-910960:1
so has part: feature:906735-906821:1:exon
so has part: feature:906916-907104:1:exon
so has part: feature:907319-907393:1:exon
so has part: feature:907946-908044:1:exon
so has part: feature:908336-908491:1:exon
so has part: feature:909137-909220:1:exon
so has part: feature:910892-910960:1:exon

XP_021384180.1
type: Protein
SIO_000068: ncbiprotein

position:906735:1
position: 906735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:910960:1
position: 910960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:906735-906821:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:906916-907104:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:907319-907393:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:907946-908044:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:908336-908491:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:909137-909220:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:910892-910960:1:exon

TNMD
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TNMD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(914624..922832)
location: region:914624-922832:-1
so has part: feature:914624-922832:-1:exon
subclass of: SO_0000010

110469604
type: Gene
SIO_000068: ncbigene

position:914624:-1
position: 914624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:922832:-1
position: 922832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:914624-922832:-1:exon

TNMD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TNMD
product: tenomodulin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 27% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021528504.1
SIO_010081: TNMD
subclass of: SO_0000673
so part of: TNMD
location: complement(join(914624..914833,915169..915347,916536..916689,918418..918519,919296..919436,922515..922649,922773..922832))
location: region:914624-922832:-1
so has part: feature:922773-922832:-1:exon
so has part: feature:922515-922649:-1:exon
so has part: feature:919296-919436:-1:exon
so has part: feature:918418-918519:-1:exon
so has part: feature:916536-916689:-1:exon
so has part: feature:915169-915347:-1:exon
so has part: feature:914624-914833:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:922773-922832:-1:exon

position:922773:-1
position: 922773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:922515-922649:-1:exon

position:922515:-1
position: 922515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:922649:-1
position: 922649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:919296-919436:-1:exon

position:919296:-1
position: 919296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919436:-1
position: 919436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:918418-918519:-1:exon

position:918418:-1
position: 918418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:918519:-1
position: 918519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:916536-916689:-1:exon

position:916536:-1
position: 916536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:916689:-1
position: 916689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:915169-915347:-1:exon

position:915169:-1
position: 915169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:915347:-1
position: 915347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:914624-914833:-1:exon

position:914833:-1
position: 914833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TNMD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TNMD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tenomodulin
translation: MGGSARRSPEDCRFLDAEAAKPPKKSCPRYQLCGLLFSVLLLSLILIFFGVKYLWNPAPRKVYDMEHTFFSNGQKKKIVMEIDPLARTETFSSGNGSEEILEIHDFKNGITGIFFVGLQKCFIKTQTKVLPETTEAKIPELEGQEITTTYFEQSVVWVPGEKPIQNKEFLKSSKIFDICKNMTIFWIHPTPIAAPELANLEGAEEEEAELLADSQSWLDGGSEQEQELEQDRQAGPRRRARQLTEEELPVNDYSENGLEFHPLWDERGYCCAQCRRANRYCRRVCEPLLGYYPYPYCYQGGRVICRIIMPCNWWIARMLGRV
SIO_010081: TNMD
subclass of: SO_0000673
so part of: TNMD
location: complement(join(914624..914833,915169..915347,916536..916689,918418..918519,919296..919436,922515..922649,922773..922820))
location: region:914624-922820:-1
so has part: feature:922773-922820:-1:exon
so has part: feature:922515-922649:-1:exon
so has part: feature:919296-919436:-1:exon
so has part: feature:918418-918519:-1:exon
so has part: feature:916536-916689:-1:exon
so has part: feature:915169-915347:-1:exon
so has part: feature:914624-914833:-1:exon

XP_021384179.1
type: Protein
SIO_000068: ncbiprotein

position:922820:-1
position: 922820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:922773-922820:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:922515-922649:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:919296-919436:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918418-918519:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:916536-916689:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:915169-915347:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:914624-914833:-1:exon

PCDH19
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: PCDH19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 947148..1004093
location: region:947148-1004093:1
so has part: feature:947148-1004093:1:exon
subclass of: SO_0000010

110469594
type: Gene
SIO_000068: ncbigene

position:947148:1
position: 947148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1004093:1
position: 1004093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:947148-1004093:1:exon

PCDH19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PCDH19
product: protocadherin 19, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021528486.2
SIO_010081: PCDH19
subclass of: SO_0000673
so part of: PCDH19
location: join(947148..949303,952259..952586,975439..975497,978903..979075,1000934..1004093)
location: region:947148-1004093:1
so has part: feature:947148-949303:1:exon
so has part: feature:952259-952586:1:exon
so has part: feature:975439-975497:1:exon
so has part: feature:978903-979075:1:exon
so has part: feature:1000934-1004093:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:947148-949303:1:exon

position:949303:1
position: 949303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:952259-952586:1:exon

position:952259:1
position: 952259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:952586:1
position: 952586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:975439-975497:1:exon

position:975439:1
position: 975439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:975497:1
position: 975497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:978903-979075:1:exon

position:978903:1
position: 978903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:979075:1
position: 979075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1000934-1004093:1:exon

position:1000934:1
position: 1000934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCDH19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PCDH19
product: protocadherin 19, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 4 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021528487.2
SIO_010081: PCDH19
subclass of: SO_0000673
so part of: PCDH19
location: join(947148..949303,952259..952586,975439..975497,978906..979075,1000934..1004093)
location: region:947148-1004093:1
so has part: feature:947148-949303:1:exon
so has part: feature:952259-952586:1:exon
so has part: feature:975439-975497:1:exon
so has part: feature:978906-979075:1:exon
so has part: feature:1000934-1004093:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:947148-949303:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:952259-952586:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:975439-975497:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:978906-979075:1:exon

position:978906:1
position: 978906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1000934-1004093:1:exon

PCDH19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PCDH19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-19 isoform X1
translation: MGALPALLAAALLWAGAGALVNLKYSVEEEQRAGTVIANVAKDARDAGFVLDPRQPAAFRVVSNSAPHLVDISPGSGLLVTKQKIDRDLLCRQSPKCVISLEVMSSSMEICVIKLEIKDLNDNAPSFPTDQIELEISETASPGTRVPLESAYDPDSGSFGVQSYEITPNDLFGLETKTRGDGSRFAELVVEKSLDRETQSHYSYVITALDGGDPPNFGTVELSIRVIDSNDNNPLFEEPAYTVSVPENAPPGTPVIRLNASDPDEGTNGQVLYSFHSYVSERARELFQIDPQSGLITVSGAIDYEEGHVYELDVQAKDLGPNSIPAHCKVTISVQDANDNPPLINLLSVNSELVEVSENAPPGYVIALVRVSDRDSGANGRVQCKLLGNVPFRLQEYESFSTILVDGRLDREQRDQYNLTIQARDNGIPSLQATKSFTVKITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDPDLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGNPSLQSNATVRVIVLDVNDNTPVITAPPLVNGTAEVYIPRNAGVGYLVTVVKADDYDEGENGRLSYEMVEGDRGFFEIDQVNGEIRTTRAFGENAKTAYELIVVAHDHGKTSLSASALILIYLSPALDAQESIGSVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCRIAEYSYGHQKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSESTFLNVESQNSRNAGSNHIYHHTFTGQSPQQPDLIINGMPLPETENYSFDSNYVNSRAHLIKSSSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGLYCDTAVNDVLNTSVPSMGSQGPEPEQSEGFHCREECRILGHSDRCWMPRGAVPSRAKSPEHGRNVIALSIEASAVDAEPYADCGTKRTFATFGKEGGEPPAEERLANPKGKRTVDSAACSPKVSGAVREAGNGCEAVSPVTSPLHLKSPLSLAGKPAAYAAGHCAGSREPFGNSGGPSRPTEAEPRGADSESSGQEGNPLLQERREKDSPGARRLKDIVL
SIO_010081: PCDH19
subclass of: SO_0000673
so part of: PCDH19
location: join(947163..949303,952259..952586,975439..975497,978903..979075,1000934..1001523)
location: region:947163-1001523:1
so has part: feature:947163-949303:1:exon
so has part: feature:952259-952586:1:exon
so has part: feature:975439-975497:1:exon
so has part: feature:978903-979075:1:exon
so has part: feature:1000934-1001523:1:exon

XP_021384161.1
type: Protein
SIO_000068: ncbiprotein

position:947163:1
position: 947163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1001523:1
position: 1001523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:947163-949303:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:952259-952586:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:975439-975497:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:978903-979075:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1000934-1001523:1:exon

PCDH19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PCDH19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-19 isoform X2
translation: MGALPALLAAALLWAGAGALVNLKYSVEEEQRAGTVIANVAKDARDAGFVLDPRQPAAFRVVSNSAPHLVDISPGSGLLVTKQKIDRDLLCRQSPKCVISLEVMSSSMEICVIKLEIKDLNDNAPSFPTDQIELEISETASPGTRVPLESAYDPDSGSFGVQSYEITPNDLFGLETKTRGDGSRFAELVVEKSLDRETQSHYSYVITALDGGDPPNFGTVELSIRVIDSNDNNPLFEEPAYTVSVPENAPPGTPVIRLNASDPDEGTNGQVLYSFHSYVSERARELFQIDPQSGLITVSGAIDYEEGHVYELDVQAKDLGPNSIPAHCKVTISVQDANDNPPLINLLSVNSELVEVSENAPPGYVIALVRVSDRDSGANGRVQCKLLGNVPFRLQEYESFSTILVDGRLDREQRDQYNLTIQARDNGIPSLQATKSFTVKITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDPDLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGNPSLQSNATVRVIVLDVNDNTPVITAPPLVNGTAEVYIPRNAGVGYLVTVVKADDYDEGENGRLSYEMVEGDRGFFEIDQVNGEIRTTRAFGENAKTAYELIVVAHDHGKTSLSASALILIYLSPALDAQESIGSVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCRIAEYSYGHQKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSESTFLNVESQNSRNAGSNHIYHHTFTGQSPQQPDLIINGMPLPETENYSFDSNYVNSRAHLIKSSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGLYCDTAVNDVLNTSVPSMGSQGPEPEQSEGFHCREECRILGHSDRCWMPRGAVPSRAKSPEHGRNVIALSIEASAVDAEPYADCGTKRTFATFGKEGGEPPAEERLANPKGKRTVDSAACSPKVSGAVREAGNGCEAVSPVTSPLHLKSPLSLAGKPAAYAAGHCAGSREPFGNSGGPSRPTEAEPRGADSESSGQEGNPLLQERREKDSPGARRLKDIVL
SIO_010081: PCDH19
subclass of: SO_0000673
so part of: PCDH19
location: join(947163..949303,952259..952586,975439..975497,978906..979075,1000934..1001523)
location: region:947163-1001523:1
so has part: feature:947163-949303:1:exon
so has part: feature:952259-952586:1:exon
so has part: feature:975439-975497:1:exon
so has part: feature:978906-979075:1:exon
so has part: feature:1000934-1001523:1:exon

XP_021384162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:947163-949303:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:952259-952586:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:975439-975497:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:978906-979075:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1000934-1001523:1:exon

LOC110469603
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110469603
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1426819..1428910)
location: region:1426819-1428910:-1
so has part: feature:1426819-1428910:-1:exon
subclass of: SO_0000011

110469603
type: Gene
SIO_000068: ncbigene

position:1426819:-1
position: 1426819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1428910:-1
position: 1428910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1426819-1428910:-1:exon

LOC110469603
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110469603
product: uncharacterized LOC110469603
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002465278.1
SIO_010081: LOC110469603
subclass of: SO_0000673
so part of: LOC110469603
location: complement(join(1426819..1427097,1428797..1428910))
location: region:1426819-1428910:-1
so has part: feature:1428797-1428910:-1:exon
so has part: feature:1426819-1427097:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1428797-1428910:-1:exon

position:1428797:-1
position: 1428797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1426819-1427097:-1:exon

position:1427097:-1
position: 1427097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DIAPH2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: DIAPH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1561845..1731694)
location: region:1561845-1731694:-1
so has part: feature:1561845-1731694:-1:exon
subclass of: SO_0000010

110469593
type: Gene
SIO_000068: ncbigene

position:1561845:-1
position: 1561845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1731694:-1
position: 1731694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1561845-1731694:-1:exon

DIAPH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: DIAPH2
product: diaphanous related formin 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021528485.1
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1561845..1566589,1613781..1613876,1623411..1623546,1631270..1631434,1647175..1647299,1659103..1659232,1663935..1664174,1670031..1670132,1671864..1671958,1673336..1673437,1691093..1691207,1693647..1694315,1695924..1696028,1696660..1696724,1697009..1697127,1697674..1697790,1698720..1698838,1700649..1700759,1703087..1703198,1703971..1704107,1705057..1705126,1705208..1705282,1705672..1705811,1709834..1709854,1713396..1713500,1714350..1714526,1731466..1731694))
location: region:1561845-1731694:-1
so has part: feature:1731466-1731694:-1:exon
so has part: feature:1714350-1714526:-1:exon
so has part: feature:1713396-1713500:-1:exon
so has part: feature:1709834-1709854:-1:exon
so has part: feature:1705672-1705811:-1:exon
so has part: feature:1705208-1705282:-1:exon
so has part: feature:1705057-1705126:-1:exon
so has part: feature:1703971-1704107:-1:exon
so has part: feature:1703087-1703198:-1:exon
so has part: feature:1700649-1700759:-1:exon
so has part: feature:1698720-1698838:-1:exon
so has part: feature:1697674-1697790:-1:exon
so has part: feature:1697009-1697127:-1:exon
so has part: feature:1696660-1696724:-1:exon
so has part: feature:1695924-1696028:-1:exon
so has part: feature:1693647-1694315:-1:exon
so has part: feature:1691093-1691207:-1:exon
so has part: feature:1673336-1673437:-1:exon
so has part: feature:1671864-1671958:-1:exon
so has part: feature:1670031-1670132:-1:exon
so has part: feature:1663935-1664174:-1:exon
so has part: feature:1659103-1659232:-1:exon
so has part: feature:1647175-1647299:-1:exon
so has part: feature:1631270-1631434:-1:exon
so has part: feature:1623411-1623546:-1:exon
so has part: feature:1613781-1613876:-1:exon
so has part: feature:1561845-1566589:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1731466-1731694:-1:exon

position:1731466:-1
position: 1731466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1714350-1714526:-1:exon

position:1714350:-1
position: 1714350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1714526:-1
position: 1714526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1713396-1713500:-1:exon

position:1713396:-1
position: 1713396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1713500:-1
position: 1713500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1709834-1709854:-1:exon

position:1709834:-1
position: 1709834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1709854:-1
position: 1709854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1705672-1705811:-1:exon

position:1705672:-1
position: 1705672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1705811:-1
position: 1705811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1705208-1705282:-1:exon

position:1705208:-1
position: 1705208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1705282:-1
position: 1705282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1705057-1705126:-1:exon

position:1705057:-1
position: 1705057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1705126:-1
position: 1705126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1703971-1704107:-1:exon

position:1703971:-1
position: 1703971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1704107:-1
position: 1704107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1703087-1703198:-1:exon

position:1703087:-1
position: 1703087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1703198:-1
position: 1703198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1700649-1700759:-1:exon

position:1700649:-1
position: 1700649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1700759:-1
position: 1700759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1698720-1698838:-1:exon

position:1698720:-1
position: 1698720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1698838:-1
position: 1698838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1697674-1697790:-1:exon

position:1697674:-1
position: 1697674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1697790:-1
position: 1697790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1697009-1697127:-1:exon

position:1697009:-1
position: 1697009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1697127:-1
position: 1697127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1696660-1696724:-1:exon

position:1696660:-1
position: 1696660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1696724:-1
position: 1696724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1695924-1696028:-1:exon

position:1695924:-1
position: 1695924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1696028:-1
position: 1696028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1693647-1694315:-1:exon

position:1693647:-1
position: 1693647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1694315:-1
position: 1694315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1691093-1691207:-1:exon

position:1691093:-1
position: 1691093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1691207:-1
position: 1691207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1673336-1673437:-1:exon

position:1673336:-1
position: 1673336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1673437:-1
position: 1673437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1671864-1671958:-1:exon

position:1671864:-1
position: 1671864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1671958:-1
position: 1671958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1670031-1670132:-1:exon

position:1670031:-1
position: 1670031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1670132:-1
position: 1670132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1663935-1664174:-1:exon

position:1663935:-1
position: 1663935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1664174:-1
position: 1664174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1659103-1659232:-1:exon

position:1659103:-1
position: 1659103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1659232:-1
position: 1659232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1647175-1647299:-1:exon

position:1647175:-1
position: 1647175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1647299:-1
position: 1647299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1631270-1631434:-1:exon

position:1631270:-1
position: 1631270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1631434:-1
position: 1631434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1623411-1623546:-1:exon

position:1623411:-1
position: 1623411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1623546:-1
position: 1623546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1613781-1613876:-1:exon

position:1613781:-1
position: 1613781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1613876:-1
position: 1613876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1561845-1566589:-1:exon

position:1566589:-1
position: 1566589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DIAPH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: DIAPH2
product: diaphanous related formin 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021528484.1
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1561845..1566589,1613781..1613876,1623411..1623546,1631270..1631434,1647175..1647299,1659103..1659232,1663935..1664174,1670031..1670132,1671864..1671958,1673336..1673437,1691093..1691207,1693647..1694315,1695924..1696028,1696660..1696724,1697009..1697127,1697674..1697790,1698720..1698838,1700649..1700759,1703087..1703198,1703971..1704107,1705057..1705126,1705208..1705282,1705672..1705811,1713396..1713500,1714350..1714526,1716774..1716806,1731466..1731694))
location: region:1561845-1731694:-1
so has part: feature:1731466-1731694:-1:exon
so has part: feature:1716774-1716806:-1:exon
so has part: feature:1714350-1714526:-1:exon
so has part: feature:1713396-1713500:-1:exon
so has part: feature:1705672-1705811:-1:exon
so has part: feature:1705208-1705282:-1:exon
so has part: feature:1705057-1705126:-1:exon
so has part: feature:1703971-1704107:-1:exon
so has part: feature:1703087-1703198:-1:exon
so has part: feature:1700649-1700759:-1:exon
so has part: feature:1698720-1698838:-1:exon
so has part: feature:1697674-1697790:-1:exon
so has part: feature:1697009-1697127:-1:exon
so has part: feature:1696660-1696724:-1:exon
so has part: feature:1695924-1696028:-1:exon
so has part: feature:1693647-1694315:-1:exon
so has part: feature:1691093-1691207:-1:exon
so has part: feature:1673336-1673437:-1:exon
so has part: feature:1671864-1671958:-1:exon
so has part: feature:1670031-1670132:-1:exon
so has part: feature:1663935-1664174:-1:exon
so has part: feature:1659103-1659232:-1:exon
so has part: feature:1647175-1647299:-1:exon
so has part: feature:1631270-1631434:-1:exon
so has part: feature:1623411-1623546:-1:exon
so has part: feature:1613781-1613876:-1:exon
so has part: feature:1561845-1566589:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1731466-1731694:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1716774-1716806:-1:exon

position:1716774:-1
position: 1716774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1716806:-1
position: 1716806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1714350-1714526:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1713396-1713500:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1705672-1705811:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1705208-1705282:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1705057-1705126:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1703971-1704107:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1703087-1703198:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1700649-1700759:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1698720-1698838:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1697674-1697790:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1697009-1697127:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1696660-1696724:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1695924-1696028:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1693647-1694315:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1691093-1691207:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1673336-1673437:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1671864-1671958:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1670031-1670132:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1663935-1664174:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1659103-1659232:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1647175-1647299:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1631270-1631434:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1623411-1623546:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1613781-1613876:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1561845-1566589:-1:exon

DIAPH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: DIAPH2
product: diaphanous related formin 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021528483.1
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1561845..1566589,1613781..1613876,1623411..1623546,1631270..1631434,1647175..1647299,1659103..1659232,1663935..1664174,1670031..1670132,1671864..1671958,1673336..1673437,1691093..1691207,1693647..1694315,1695924..1696028,1696660..1696724,1697009..1697127,1697674..1697790,1698720..1698838,1700649..1700759,1703087..1703198,1703971..1704107,1705057..1705126,1705208..1705282,1705672..1705811,1709834..1709854,1713396..1713500,1714350..1714526,1716774..1716806,1731466..1731694))
location: region:1561845-1731694:-1
so has part: feature:1731466-1731694:-1:exon
so has part: feature:1716774-1716806:-1:exon
so has part: feature:1714350-1714526:-1:exon
so has part: feature:1713396-1713500:-1:exon
so has part: feature:1709834-1709854:-1:exon
so has part: feature:1705672-1705811:-1:exon
so has part: feature:1705208-1705282:-1:exon
so has part: feature:1705057-1705126:-1:exon
so has part: feature:1703971-1704107:-1:exon
so has part: feature:1703087-1703198:-1:exon
so has part: feature:1700649-1700759:-1:exon
so has part: feature:1698720-1698838:-1:exon
so has part: feature:1697674-1697790:-1:exon
so has part: feature:1697009-1697127:-1:exon
so has part: feature:1696660-1696724:-1:exon
so has part: feature:1695924-1696028:-1:exon
so has part: feature:1693647-1694315:-1:exon
so has part: feature:1691093-1691207:-1:exon
so has part: feature:1673336-1673437:-1:exon
so has part: feature:1671864-1671958:-1:exon
so has part: feature:1670031-1670132:-1:exon
so has part: feature:1663935-1664174:-1:exon
so has part: feature:1659103-1659232:-1:exon
so has part: feature:1647175-1647299:-1:exon
so has part: feature:1631270-1631434:-1:exon
so has part: feature:1623411-1623546:-1:exon
so has part: feature:1613781-1613876:-1:exon
so has part: feature:1561845-1566589:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1731466-1731694:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1716774-1716806:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1714350-1714526:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1713396-1713500:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1709834-1709854:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1705672-1705811:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1705208-1705282:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1705057-1705126:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1703971-1704107:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1703087-1703198:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1700649-1700759:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1698720-1698838:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1697674-1697790:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1697009-1697127:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1696660-1696724:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1695924-1696028:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1693647-1694315:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1691093-1691207:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1673336-1673437:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1671864-1671958:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1670031-1670132:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1663935-1664174:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1659103-1659232:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1647175-1647299:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1631270-1631434:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1623411-1623546:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1613781-1613876:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1561845-1566589:-1:exon

DIAPH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: DIAPH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein diaphanous homolog 2 isoform X3
translation: MDGHGAPGAGGEEPLSSGRMNAKRGGRAAEEESRNKPKLRDRITSFRKAAVKKEKPLIQHPIDSQPSISEIPHAQALVDERCMNLSEKEVMDLFEKMMEDMNLNEERKAPLRDKDLSTKREMVVQYISATAKSIVGSKVPGGLKNSKHECTLSSQEYIHELRSGISDEKLLNCLESLRVSLTSNPVSWVNNFGHEGLGLLLDALEKLLDKKQQESIDKKNQHKLIQCLKAFMNNKYGLQRILGDERSLLLLSRAIDPKQPHMMTETVKILSAICIIGEENILDKLLGAITTAAERHSREERFSQIVEGLENHEFIQLQVACMQLINALVTSPEDLDFRIHLRNEFLRCGLKKILPALKEKENDELDIQLRVFDENKDEDHFELSHRLNDIKAEMDDVSEVFHLLYNMVKDTSSENYFLSILQHFLLIRNDYYVRPQYYKIIEECVSQIVLHCSGMDPDFKYRGRMDINFTHLVDACVDKAKVEESEKKAAEFSRKFDEEFTARQEAQAELQKREEKIKELETEVKQLRTQGPVLTEVPGIPSALPSENVPPSPAPSLPGGAIPPPPPLPGAATIPPPPPLPGAAAIPPPPPLPGGAGIPPPPPLPGGAGIPPPPLLPGGAGIPPPPPLPGGAAIPPPPPLPGASLPPAPPPLPGGAIPPPPPLPGVPPPPPLPGGAGPPPPPPLPGGAGPPPPPPLPGGAIPPPPPFGGPPMPPPLGGALFAPFPAVPALPHGMKEKKKYKLEVSMKRINWSKIEPQEIGENSFWVKAEEDKFEDPELFAKLALTFGTQMKAKKPVEESEEKKAAQSKKKIKELRVLDGKSAQNLSIFLGSFRLPYEEIKNIILEVDEEKLSESLIQNLVKNLPEQKELNALAELKEEYNDLAEPEQFGVVMSSVKMLRARLNGILFRLMFEEHVNNIKPDIMAVTLACEELKKSESFSKLLELVLFLGNYMNSGSRNAQSLGFNISFLCKIRDTKSSDQKTTLLHFLAEICEENYRDILKFPDELQHVESASKVSAQTLKSNLDSMNQQIQRLEKDIENFPKTQDEHDKFVEKMSSFAESAREQYEKLSNMHNNMTKLYENLGEYFTFDPKTISIEEFFGDLSNFRTLFLEALKENNKRRELEEKTKRAKLAKEKAERERLERQKKKQQLIDMNKEGDETGVMDSLLEALQSGAAFRDRRKRTPRAPDNKRVTLERSRSRHNGAIAAV
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1566525..1566589,1613781..1613876,1623411..1623546,1631270..1631434,1647175..1647299,1659103..1659232,1663935..1664174,1670031..1670132,1671864..1671958,1673336..1673437,1691093..1691207,1693647..1694315,1695924..1696028,1696660..1696724,1697009..1697127,1697674..1697790,1698720..1698838,1700649..1700759,1703087..1703198,1703971..1704107,1705057..1705126,1705208..1705282,1705672..1705811,1709834..1709854,1713396..1713500,1714350..1714526,1731466..1731582))
location: region:1566525-1731582:-1
so has part: feature:1731466-1731582:-1:exon
so has part: feature:1714350-1714526:-1:exon
so has part: feature:1713396-1713500:-1:exon
so has part: feature:1709834-1709854:-1:exon
so has part: feature:1705672-1705811:-1:exon
so has part: feature:1705208-1705282:-1:exon
so has part: feature:1705057-1705126:-1:exon
so has part: feature:1703971-1704107:-1:exon
so has part: feature:1703087-1703198:-1:exon
so has part: feature:1700649-1700759:-1:exon
so has part: feature:1698720-1698838:-1:exon
so has part: feature:1697674-1697790:-1:exon
so has part: feature:1697009-1697127:-1:exon
so has part: feature:1696660-1696724:-1:exon
so has part: feature:1695924-1696028:-1:exon
so has part: feature:1693647-1694315:-1:exon
so has part: feature:1691093-1691207:-1:exon
so has part: feature:1673336-1673437:-1:exon
so has part: feature:1671864-1671958:-1:exon
so has part: feature:1670031-1670132:-1:exon
so has part: feature:1663935-1664174:-1:exon
so has part: feature:1659103-1659232:-1:exon
so has part: feature:1647175-1647299:-1:exon
so has part: feature:1631270-1631434:-1:exon
so has part: feature:1623411-1623546:-1:exon
so has part: feature:1613781-1613876:-1:exon
so has part: feature:1566525-1566589:-1:exon

XP_021384160.1
type: Protein
SIO_000068: ncbiprotein

position:1566525:-1
position: 1566525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1731582:-1
position: 1731582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1731466-1731582:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1714350-1714526:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1713396-1713500:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1709834-1709854:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1705672-1705811:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1705208-1705282:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1705057-1705126:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1703971-1704107:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1703087-1703198:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1700649-1700759:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1698720-1698838:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1697674-1697790:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1697009-1697127:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1696660-1696724:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1695924-1696028:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1693647-1694315:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1691093-1691207:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1673336-1673437:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1671864-1671958:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1670031-1670132:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1663935-1664174:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1659103-1659232:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1647175-1647299:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1631270-1631434:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1623411-1623546:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1613781-1613876:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1566525-1566589:-1:exon

DIAPH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: DIAPH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein diaphanous homolog 2 isoform X2
translation: MDGHGAPGAGGEEPLSSGRMNAKRGGRAAEEESRNKPKLNIQIKTLADDVRDRITSFRKAAVKKEKPLIQHPIDSQPSISEIPHAQALVDERCMNLSEKEVMDLFEKMMEDMNLNEERKAPLRDKDLSTKREMVVQYISATAKSGGLKNSKHECTLSSQEYIHELRSGISDEKLLNCLESLRVSLTSNPVSWVNNFGHEGLGLLLDALEKLLDKKQQESIDKKNQHKLIQCLKAFMNNKYGLQRILGDERSLLLLSRAIDPKQPHMMTETVKILSAICIIGEENILDKLLGAITTAAERHSREERFSQIVEGLENHEFIQLQVACMQLINALVTSPEDLDFRIHLRNEFLRCGLKKILPALKEKENDELDIQLRVFDENKDEDHFELSHRLNDIKAEMDDVSEVFHLLYNMVKDTSSENYFLSILQHFLLIRNDYYVRPQYYKIIEECVSQIVLHCSGMDPDFKYRGRMDINFTHLVDACVDKAKVEESEKKAAEFSRKFDEEFTARQEAQAELQKREEKIKELETEVKQLRTQGPVLTEVPGIPSALPSENVPPSPAPSLPGGAIPPPPPLPGAATIPPPPPLPGAAAIPPPPPLPGGAGIPPPPPLPGGAGIPPPPLLPGGAGIPPPPPLPGGAAIPPPPPLPGASLPPAPPPLPGGAIPPPPPLPGVPPPPPLPGGAGPPPPPPLPGGAGPPPPPPLPGGAIPPPPPFGGPPMPPPLGGALFAPFPAVPALPHGMKEKKKYKLEVSMKRINWSKIEPQEIGENSFWVKAEEDKFEDPELFAKLALTFGTQMKAKKPVEESEEKKAAQSKKKIKELRVLDGKSAQNLSIFLGSFRLPYEEIKNIILEVDEEKLSESLIQNLVKNLPEQKELNALAELKEEYNDLAEPEQFGVVMSSVKMLRARLNGILFRLMFEEHVNNIKPDIMAVTLACEELKKSESFSKLLELVLFLGNYMNSGSRNAQSLGFNISFLCKIRDTKSSDQKTTLLHFLAEICEENYRDILKFPDELQHVESASKVSAQTLKSNLDSMNQQIQRLEKDIENFPKTQDEHDKFVEKMSSFAESAREQYEKLSNMHNNMTKLYENLGEYFTFDPKTISIEEFFGDLSNFRTLFLEALKENNKRRELEEKTKRAKLAKEKAERERLERQKKKQQLIDMNKEGDETGVMDSLLEALQSGAAFRDRRKRTPRAPDNKRVTLERSRSRHNGAIAAV
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1566525..1566589,1613781..1613876,1623411..1623546,1631270..1631434,1647175..1647299,1659103..1659232,1663935..1664174,1670031..1670132,1671864..1671958,1673336..1673437,1691093..1691207,1693647..1694315,1695924..1696028,1696660..1696724,1697009..1697127,1697674..1697790,1698720..1698838,1700649..1700759,1703087..1703198,1703971..1704107,1705057..1705126,1705208..1705282,1705672..1705811,1713396..1713500,1714350..1714526,1716774..1716806,1731466..1731582))
location: region:1566525-1731582:-1
so has part: feature:1731466-1731582:-1:exon
so has part: feature:1716774-1716806:-1:exon
so has part: feature:1714350-1714526:-1:exon
so has part: feature:1713396-1713500:-1:exon
so has part: feature:1705672-1705811:-1:exon
so has part: feature:1705208-1705282:-1:exon
so has part: feature:1705057-1705126:-1:exon
so has part: feature:1703971-1704107:-1:exon
so has part: feature:1703087-1703198:-1:exon
so has part: feature:1700649-1700759:-1:exon
so has part: feature:1698720-1698838:-1:exon
so has part: feature:1697674-1697790:-1:exon
so has part: feature:1697009-1697127:-1:exon
so has part: feature:1696660-1696724:-1:exon
so has part: feature:1695924-1696028:-1:exon
so has part: feature:1693647-1694315:-1:exon
so has part: feature:1691093-1691207:-1:exon
so has part: feature:1673336-1673437:-1:exon
so has part: feature:1671864-1671958:-1:exon
so has part: feature:1670031-1670132:-1:exon
so has part: feature:1663935-1664174:-1:exon
so has part: feature:1659103-1659232:-1:exon
so has part: feature:1647175-1647299:-1:exon
so has part: feature:1631270-1631434:-1:exon
so has part: feature:1623411-1623546:-1:exon
so has part: feature:1613781-1613876:-1:exon
so has part: feature:1566525-1566589:-1:exon

XP_021384159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1731466-1731582:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1716774-1716806:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1714350-1714526:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1713396-1713500:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1705672-1705811:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1705208-1705282:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1705057-1705126:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1703971-1704107:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1703087-1703198:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1700649-1700759:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1698720-1698838:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1697674-1697790:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1697009-1697127:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1696660-1696724:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1695924-1696028:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1693647-1694315:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1691093-1691207:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1673336-1673437:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1671864-1671958:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1670031-1670132:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1663935-1664174:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1659103-1659232:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1647175-1647299:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1631270-1631434:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1623411-1623546:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1613781-1613876:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1566525-1566589:-1:exon

DIAPH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: DIAPH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein diaphanous homolog 2 isoform X1
translation: MDGHGAPGAGGEEPLSSGRMNAKRGGRAAEEESRNKPKLNIQIKTLADDVRDRITSFRKAAVKKEKPLIQHPIDSQPSISEIPHAQALVDERCMNLSEKEVMDLFEKMMEDMNLNEERKAPLRDKDLSTKREMVVQYISATAKSIVGSKVPGGLKNSKHECTLSSQEYIHELRSGISDEKLLNCLESLRVSLTSNPVSWVNNFGHEGLGLLLDALEKLLDKKQQESIDKKNQHKLIQCLKAFMNNKYGLQRILGDERSLLLLSRAIDPKQPHMMTETVKILSAICIIGEENILDKLLGAITTAAERHSREERFSQIVEGLENHEFIQLQVACMQLINALVTSPEDLDFRIHLRNEFLRCGLKKILPALKEKENDELDIQLRVFDENKDEDHFELSHRLNDIKAEMDDVSEVFHLLYNMVKDTSSENYFLSILQHFLLIRNDYYVRPQYYKIIEECVSQIVLHCSGMDPDFKYRGRMDINFTHLVDACVDKAKVEESEKKAAEFSRKFDEEFTARQEAQAELQKREEKIKELETEVKQLRTQGPVLTEVPGIPSALPSENVPPSPAPSLPGGAIPPPPPLPGAATIPPPPPLPGAAAIPPPPPLPGGAGIPPPPPLPGGAGIPPPPLLPGGAGIPPPPPLPGGAAIPPPPPLPGASLPPAPPPLPGGAIPPPPPLPGVPPPPPLPGGAGPPPPPPLPGGAGPPPPPPLPGGAIPPPPPFGGPPMPPPLGGALFAPFPAVPALPHGMKEKKKYKLEVSMKRINWSKIEPQEIGENSFWVKAEEDKFEDPELFAKLALTFGTQMKAKKPVEESEEKKAAQSKKKIKELRVLDGKSAQNLSIFLGSFRLPYEEIKNIILEVDEEKLSESLIQNLVKNLPEQKELNALAELKEEYNDLAEPEQFGVVMSSVKMLRARLNGILFRLMFEEHVNNIKPDIMAVTLACEELKKSESFSKLLELVLFLGNYMNSGSRNAQSLGFNISFLCKIRDTKSSDQKTTLLHFLAEICEENYRDILKFPDELQHVESASKVSAQTLKSNLDSMNQQIQRLEKDIENFPKTQDEHDKFVEKMSSFAESAREQYEKLSNMHNNMTKLYENLGEYFTFDPKTISIEEFFGDLSNFRTLFLEALKENNKRRELEEKTKRAKLAKEKAERERLERQKKKQQLIDMNKEGDETGVMDSLLEALQSGAAFRDRRKRTPRAPDNKRVTLERSRSRHNGAIAAV
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1566525..1566589,1613781..1613876,1623411..1623546,1631270..1631434,1647175..1647299,1659103..1659232,1663935..1664174,1670031..1670132,1671864..1671958,1673336..1673437,1691093..1691207,1693647..1694315,1695924..1696028,1696660..1696724,1697009..1697127,1697674..1697790,1698720..1698838,1700649..1700759,1703087..1703198,1703971..1704107,1705057..1705126,1705208..1705282,1705672..1705811,1709834..1709854,1713396..1713500,1714350..1714526,1716774..1716806,1731466..1731582))
location: region:1566525-1731582:-1
so has part: feature:1731466-1731582:-1:exon
so has part: feature:1716774-1716806:-1:exon
so has part: feature:1714350-1714526:-1:exon
so has part: feature:1713396-1713500:-1:exon
so has part: feature:1709834-1709854:-1:exon
so has part: feature:1705672-1705811:-1:exon
so has part: feature:1705208-1705282:-1:exon
so has part: feature:1705057-1705126:-1:exon
so has part: feature:1703971-1704107:-1:exon
so has part: feature:1703087-1703198:-1:exon
so has part: feature:1700649-1700759:-1:exon
so has part: feature:1698720-1698838:-1:exon
so has part: feature:1697674-1697790:-1:exon
so has part: feature:1697009-1697127:-1:exon
so has part: feature:1696660-1696724:-1:exon
so has part: feature:1695924-1696028:-1:exon
so has part: feature:1693647-1694315:-1:exon
so has part: feature:1691093-1691207:-1:exon
so has part: feature:1673336-1673437:-1:exon
so has part: feature:1671864-1671958:-1:exon
so has part: feature:1670031-1670132:-1:exon
so has part: feature:1663935-1664174:-1:exon
so has part: feature:1659103-1659232:-1:exon
so has part: feature:1647175-1647299:-1:exon
so has part: feature:1631270-1631434:-1:exon
so has part: feature:1623411-1623546:-1:exon
so has part: feature:1613781-1613876:-1:exon
so has part: feature:1566525-1566589:-1:exon

XP_021384158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1731466-1731582:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1716774-1716806:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1714350-1714526:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1713396-1713500:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1709834-1709854:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1705672-1705811:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1705208-1705282:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1705057-1705126:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1703971-1704107:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1703087-1703198:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1700649-1700759:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1698720-1698838:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1697674-1697790:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1697009-1697127:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1696660-1696724:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1695924-1696028:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1693647-1694315:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1691093-1691207:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1673336-1673437:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1671864-1671958:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1670031-1670132:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1663935-1664174:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1659103-1659232:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1647175-1647299:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1631270-1631434:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1623411-1623546:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1613781-1613876:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1566525-1566589:-1:exon

LOC110469602
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110469602
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1780535..1809024
location: region:1780535-1809024:1
so has part: feature:1780535-1809024:1:exon
subclass of: SO_0000011

110469602
type: Gene
SIO_000068: ncbigene

position:1780535:1
position: 1780535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1809024:1
position: 1809024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1780535-1809024:1:exon

LOC110469602
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110469602
product: uncharacterized LOC110469602
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002465277.2
SIO_010081: LOC110469602
subclass of: SO_0000673
so part of: LOC110469602
location: join(1780535..1780574,1799104..1799164,1799943..1799996,1808671..1809024)
location: region:1780535-1809024:1
so has part: feature:1780535-1780574:1:exon
so has part: feature:1799104-1799164:1:exon
so has part: feature:1799943-1799996:1:exon
so has part: feature:1808671-1809024:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1780535-1780574:1:exon

position:1780574:1
position: 1780574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1799104-1799164:1:exon

position:1799104:1
position: 1799104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1799164:1
position: 1799164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1799943-1799996:1:exon

position:1799943:1
position: 1799943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1799996:1
position: 1799996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1808671-1809024:1:exon

position:1808671:1
position: 1808671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110469601
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110469601
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1820671..1825051
location: region:1820671-1825051:1
so has part: feature:1820671-1825051:1:exon
subclass of: SO_0000011

110469601
type: Gene
SIO_000068: ncbigene

position:1820671:1
position: 1820671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1825051:1
position: 1825051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1820671-1825051:1:exon

LOC110469601
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110469601
product: uncharacterized LOC110469601
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_002465276.1
SIO_010081: LOC110469601
subclass of: SO_0000673
so part of: LOC110469601
location: join(1820671..1820769,1821876..1822133,1824989..1825051)
location: region:1820671-1825051:1
so has part: feature:1820671-1820769:1:exon
so has part: feature:1821876-1822133:1:exon
so has part: feature:1824989-1825051:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1820671-1820769:1:exon

position:1820769:1
position: 1820769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1821876-1822133:1:exon

position:1821876:1
position: 1821876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1822133:1
position: 1822133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1824989-1825051:1:exon

position:1824989:1
position: 1824989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110469600
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110469600
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1825070..1841750
location: region:1825070-1841750:1
so has part: feature:1825070-1841750:1:exon
subclass of: SO_0000011

110469600
type: Gene
SIO_000068: ncbigene

position:1825070:1
position: 1825070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1841750:1
position: 1841750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1825070-1841750:1:exon

LOC110469600
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110469600
product: uncharacterized LOC110469600
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_002465275.1
SIO_010081: LOC110469600
subclass of: SO_0000673
so part of: LOC110469600
location: join(1825070..1825126,1832949..1833059,1840011..1840146,1841698..1841750)
location: region:1825070-1841750:1
so has part: feature:1825070-1825126:1:exon
so has part: feature:1832949-1833059:1:exon
so has part: feature:1840011-1840146:1:exon
so has part: feature:1841698-1841750:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1825070-1825126:1:exon

position:1825126:1
position: 1825126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1832949-1833059:1:exon

position:1832949:1
position: 1832949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1833059:1
position: 1833059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1840011-1840146:1:exon

position:1840011:1
position: 1840011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1840146:1
position: 1840146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1841698-1841750:1:exon

position:1841698:1
position: 1841698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCDH11X
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: PCDH11X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2273226..2683637)
location: region:2273226-2683637:-1
so has part: feature:2273226-2683637:-1:exon
subclass of: SO_0000010

110469592
type: Gene
SIO_000068: ncbigene

position:2273226:-1
position: 2273226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2683637:-1
position: 2683637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2273226-2683637:-1:exon

PCDH11X
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PCDH11X
product: protocadherin 11 X-linked, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021528479.1
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2273226..2278018,2399394..2399592,2510706..2510777,2656818..2659304,2683058..2683637))
location: region:2273226-2683637:-1
so has part: feature:2683058-2683637:-1:exon
so has part: feature:2656818-2659304:-1:exon
so has part: feature:2510706-2510777:-1:exon
so has part: feature:2399394-2399592:-1:exon
so has part: feature:2273226-2278018:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2683058-2683637:-1:exon

position:2683058:-1
position: 2683058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2656818-2659304:-1:exon

position:2656818:-1
position: 2656818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2659304:-1
position: 2659304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2510706-2510777:-1:exon

position:2510706:-1
position: 2510706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2510777:-1
position: 2510777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2399394-2399592:-1:exon

position:2399394:-1
position: 2399394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2399592:-1
position: 2399592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2273226-2278018:-1:exon

position:2278018:-1
position: 2278018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCDH11X
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PCDH11X
product: protocadherin 11 X-linked, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 ESTs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021528478.1
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2273226..2278018,2399394..2399592,2510706..2510777,2656818..2659304,2662373..2662420,2683058..2683637))
location: region:2273226-2683637:-1
so has part: feature:2683058-2683637:-1:exon
so has part: feature:2662373-2662420:-1:exon
so has part: feature:2656818-2659304:-1:exon
so has part: feature:2510706-2510777:-1:exon
so has part: feature:2399394-2399592:-1:exon
so has part: feature:2273226-2278018:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2683058-2683637:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2662373-2662420:-1:exon

position:2662373:-1
position: 2662373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2662420:-1
position: 2662420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2656818-2659304:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2510706-2510777:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2399394-2399592:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2273226-2278018:-1:exon

PCDH11X
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PCDH11X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-11 X-linked isoform X2
translation: MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSPLQFKLVYKTGDVPLVRVEENTGEIFTAANRIDREKLCAGIFSENRCFYEVEVAVLPDEVFRLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLKGQNVFGLDITETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDGGSPPRSSTAILQVTVTDVNDNRPVFKENDVEVSVPENAPVGTSVSQLHATDADLGSNAQIHFYFSNQISSLAKRLFAIDNTTGLITIREPLDREESPVHKLTVLASDGSSTPSRATVTVNVTDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADQNGKVTCFTDHDVPFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTAVRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLPMYGTVGLITVTDADAGDNAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQVKAVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSASPGSVVTKVFAVDNDTGMNAELRYSIIGGNARGLFTIDQLTGNITLKEKVIASDHGLHRLVIKVNDLGQPESLYTIALVHLFVNETVTNSSYVQELVRRNMETPVGQNIGDGEITPQTNDYVKIIIAIIAGTMTVILVIFVTALVRCRQTPRHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVTIEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGPIHTRQHTKEVGRPQTPLKETTLESWTQPQPQRRVTFHLPDGSQESCSDSGLGDHEPTSGASTSHPLPLGFPQDEFYEQASPNSRTEGDGNSDPESTIEVNLQKALAEASENCTQECLILGHSDNCWMPPALAQFQQPNASLPSFGFQQGWGRGARPEGRHTLGRPLPKDDSDKGQGGPRPQFYNTCERHCAGEDPVKVIPLANFAAAHAAPGAGSSATFVHEHQL
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2277627..2278018,2399394..2399592,2510706..2510777,2656818..2659304,2683058..2683597))
location: region:2277627-2683597:-1
so has part: feature:2683058-2683597:-1:exon
so has part: feature:2656818-2659304:-1:exon
so has part: feature:2510706-2510777:-1:exon
so has part: feature:2399394-2399592:-1:exon
so has part: feature:2277627-2278018:-1:exon

XP_021384154.1
type: Protein
SIO_000068: ncbiprotein

position:2277627:-1
position: 2277627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2683597:-1
position: 2683597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2683058-2683597:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2656818-2659304:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2510706-2510777:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2399394-2399592:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2277627-2278018:-1:exon

PCDH11X
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PCDH11X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-11 X-linked isoform X1
translation: MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSPLQFKLVYKTGDVPLVRVEENTGEIFTAANRIDREKLCAGIFSENRCFYEVEVAVLPDEVFRLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLKPKTAPKRTFGSITNDQGQNVFGLDITETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDGGSPPRSSTAILQVTVTDVNDNRPVFKENDVEVSVPENAPVGTSVSQLHATDADLGSNAQIHFYFSNQISSLAKRLFAIDNTTGLITIREPLDREESPVHKLTVLASDGSSTPSRATVTVNVTDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADQNGKVTCFTDHDVPFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTAVRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLPMYGTVGLITVTDADAGDNAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQVKAVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSASPGSVVTKVFAVDNDTGMNAELRYSIIGGNARGLFTIDQLTGNITLKEKVIASDHGLHRLVIKVNDLGQPESLYTIALVHLFVNETVTNSSYVQELVRRNMETPVGQNIGDGEITPQTNDYVKIIIAIIAGTMTVILVIFVTALVRCRQTPRHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVTIEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGPIHTRQHTKEVGRPQTPLKETTLESWTQPQPQRRVTFHLPDGSQESCSDSGLGDHEPTSGASTSHPLPLGFPQDEFYEQASPNSRTEGDGNSDPESTIEVNLQKALAEASENCTQECLILGHSDNCWMPPALAQFQQPNASLPSFGFQQGWGRGARPEGRHTLGRPLPKDDSDKGQGGPRPQFYNTCERHCAGEDPVKVIPLANFAAAHAAPGAGSSATFVHEHQL
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2277627..2278018,2399394..2399592,2510706..2510777,2656818..2659304,2662373..2662420,2683058..2683597))
location: region:2277627-2683597:-1
so has part: feature:2683058-2683597:-1:exon
so has part: feature:2662373-2662420:-1:exon
so has part: feature:2656818-2659304:-1:exon
so has part: feature:2510706-2510777:-1:exon
so has part: feature:2399394-2399592:-1:exon
so has part: feature:2277627-2278018:-1:exon

XP_021384153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2683058-2683597:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2662373-2662420:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2656818-2659304:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2510706-2510777:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2399394-2399592:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2277627-2278018:-1:exon

PCDH11X
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PCDH11X
product: protocadherin 11 X-linked, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021528480.2
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2510139..2510777,2656818..2659304,2662373..2662420,2683058..2683637))
location: region:2510139-2683637:-1
so has part: feature:2683058-2683637:-1:exon
so has part: feature:2662373-2662420:-1:exon
so has part: feature:2656818-2659304:-1:exon
so has part: feature:2510139-2510777:-1:exon

position:2510139:-1
position: 2510139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2683058-2683637:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2662373-2662420:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2656818-2659304:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2510139-2510777:-1:exon

PCDH11X
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PCDH11X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-11 X-linked isoform X3
translation: MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSPLQFKLVYKTGDVPLVRVEENTGEIFTAANRIDREKLCAGIFSENRCFYEVEVAVLPDEVFRLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLKPKTAPKRTFGSITNDQGQNVFGLDITETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDGGSPPRSSTAILQVTVTDVNDNRPVFKENDVEVSVPENAPVGTSVSQLHATDADLGSNAQIHFYFSNQISSLAKRLFAIDNTTGLITIREPLDREESPVHKLTVLASDGSSTPSRATVTVNVTDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADQNGKVTCFTDHDVPFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTAVRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLPMYGTVGLITVTDADAGDNAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQVKAVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSASPGSVVTKVFAVDNDTGMNAELRYSIIGGNARGLFTIDQLTGNITLKEKVIASDHGLHRLVIKVNDLGQPESLYTIALVHLFVNETVTNSSYVQELVRRNMETPVGQNIGDGEITPQTNDYVKIIIAIIAGTMTVILVIFVTALVRCRQTPRHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVTIEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGPIHTRQHTKEVGRPQTPLKETTLESWTQPQVGWNNFFDHFFCVVVASVSIHGNNLQRNVATSCSVVLLSQVKMIYFGF
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2510559..2510777,2656818..2659304,2662373..2662420,2683058..2683597))
location: region:2510559-2683597:-1
so has part: feature:2683058-2683597:-1:exon
so has part: feature:2662373-2662420:-1:exon
so has part: feature:2656818-2659304:-1:exon
so has part: feature:2510559-2510777:-1:exon

XP_021384155.1
type: Protein
SIO_000068: ncbiprotein

position:2510559:-1
position: 2510559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2683058-2683597:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2662373-2662420:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2656818-2659304:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2510559-2510777:-1:exon

LOC116183642
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116183642
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2629083..2643583)
location: region:2629083-2643583:-1
so has part: feature:2629083-2643583:-1:exon
subclass of: SO_0000011

116183642
type: Gene
SIO_000068: ncbigene

position:2629083:-1
position: 2629083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2643583:-1
position: 2643583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2629083-2643583:-1:exon

LOC116183642
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC116183642
product: uncharacterized LOC116183642
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004148303.1
SIO_010081: LOC116183642
subclass of: SO_0000673
so part of: LOC116183642
location: complement(join(2629083..2629639,2634503..2634666,2639962..2643583))
location: region:2629083-2643583:-1
so has part: feature:2639962-2643583:-1:exon
so has part: feature:2634503-2634666:-1:exon
so has part: feature:2629083-2629639:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2639962-2643583:-1:exon

position:2639962:-1
position: 2639962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2634503-2634666:-1:exon

position:2634503:-1
position: 2634503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2634666:-1
position: 2634666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2629083-2629639:-1:exon

position:2629639:-1
position: 2629639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCDH11X
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: PCDH11X
product: protocadherin 11 X-linked, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_021528482.2
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2648379..2649431,2656818..2659304,2662373..2662420,2683058..2683637))
location: region:2648379-2683637:-1
so has part: feature:2683058-2683637:-1:exon
so has part: feature:2662373-2662420:-1:exon
so has part: feature:2656818-2659304:-1:exon
so has part: feature:2648379-2649431:-1:exon

position:2648379:-1
position: 2648379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2683058-2683637:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2662373-2662420:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2656818-2659304:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2648379-2649431:-1:exon

position:2649431:-1
position: 2649431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCDH11X
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: PCDH11X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-11 X-linked isoform X4
translation: MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSPLQFKLVYKTGDVPLVRVEENTGEIFTAANRIDREKLCAGIFSENRCFYEVEVAVLPDEVFRLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLKPKTAPKRTFGSITNDQGQNVFGLDITETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDGGSPPRSSTAILQVTVTDVNDNRPVFKENDVEVSVPENAPVGTSVSQLHATDADLGSNAQIHFYFSNQISSLAKRLFAIDNTTGLITIREPLDREESPVHKLTVLASDGSSTPSRATVTVNVTDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADQNGKVTCFTDHDVPFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTAVRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLPMYGTVGLITVTDADAGDNAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQVKAVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSASPGSVVTKVFAVDNDTGMNAELRYSIIGGNARGLFTIDQLTGNITLKEKVIASDHGLHRLVIKVNDLGQPESLYTIALVHLFVNETVTNSSYVQELVRRNMETPVGQNIGDGEITPQTNDYVKIIIAIIAGTMTVILVIFVTALVRCRQTPRHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVTIEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGPIHTRQL
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2649426..2649431,2656818..2659304,2662373..2662420,2683058..2683597))
location: region:2649426-2683597:-1
so has part: feature:2683058-2683597:-1:exon
so has part: feature:2662373-2662420:-1:exon
so has part: feature:2656818-2659304:-1:exon
so has part: feature:2649426-2649431:-1:exon

XP_021384157.1
type: Protein
SIO_000068: ncbiprotein

position:2649426:-1
position: 2649426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2683058-2683597:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2662373-2662420:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2656818-2659304:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2649426-2649431:-1:exon

LOC110482647
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110482647
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2694253..2738699)
location: region:2694253-2738699:-1
so has part: feature:2694253-2738699:-1:exon
subclass of: SO_0000010

110482647
type: Gene
SIO_000068: ncbigene

position:2694253:-1
position: 2694253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2738699:-1
position: 2738699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2694253-2738699:-1:exon

LOC110482647
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110482647
product: protocadherin-11 X-linked
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_021552061.2
SIO_010081: LOC110482647
subclass of: SO_0000673
so part of: LOC110482647
location: complement(join(2694253..2695007,2738228..2738699))
location: region:2694253-2738699:-1
so has part: feature:2738228-2738699:-1:exon
so has part: feature:2694253-2695007:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2738228-2738699:-1:exon

position:2738228:-1
position: 2738228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2694253-2695007:-1:exon

position:2695007:-1
position: 2695007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110482647
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110482647
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-11 X-linked
translation: MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSPLQFKLVYKTGDVPLVRVEENTGEIFTAANRIDREKLCAGIFSENRCFYEVEVAVLPDEVFRLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLKVGFFHPSPLLCVSLSSHKCCQSSPTRQKPQAVCCTQSQAAKAVNCSCGGVQVRVRV
SIO_010081: LOC110482647
subclass of: SO_0000673
so part of: LOC110482647
location: complement(2694253..2694963)
location: region:2694253-2694963:-1
so has part: feature:2694253-2694963:-1:exon

XP_021407736.1
type: Protein
SIO_000068: ncbiprotein

position:2694963:-1
position: 2694963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2694253-2694963:-1:exon

KLHL4
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: KLHL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3663340..3700536)
location: region:3663340-3700536:-1
so has part: feature:3663340-3700536:-1:exon
subclass of: SO_0000010

110471131
type: Gene
SIO_000068: ncbigene

position:3663340:-1
position: 3663340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3700536:-1
position: 3700536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3663340-3700536:-1:exon

KLHL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: KLHL4
product: kelch like family member 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021531416.1
SIO_010081: KLHL4
subclass of: SO_0000673
so part of: KLHL4
location: complement(join(3663340..3664959,3666250..3666421,3667522..3667734,3670322..3670484,3672278..3672502,3676043..3676229,3677282..3677494,3680254..3680450,3681376..3681512,3682391..3682561,3700077..3700536))
location: region:3663340-3700536:-1
so has part: feature:3700077-3700536:-1:exon
so has part: feature:3682391-3682561:-1:exon
so has part: feature:3681376-3681512:-1:exon
so has part: feature:3680254-3680450:-1:exon
so has part: feature:3677282-3677494:-1:exon
so has part: feature:3676043-3676229:-1:exon
so has part: feature:3672278-3672502:-1:exon
so has part: feature:3670322-3670484:-1:exon
so has part: feature:3667522-3667734:-1:exon
so has part: feature:3666250-3666421:-1:exon
so has part: feature:3663340-3664959:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3700077-3700536:-1:exon

position:3700077:-1
position: 3700077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3682391-3682561:-1:exon

position:3682391:-1
position: 3682391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3682561:-1
position: 3682561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3681376-3681512:-1:exon

position:3681376:-1
position: 3681376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3681512:-1
position: 3681512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3680254-3680450:-1:exon

position:3680254:-1
position: 3680254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3680450:-1
position: 3680450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3677282-3677494:-1:exon

position:3677282:-1
position: 3677282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3677494:-1
position: 3677494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3676043-3676229:-1:exon

position:3676043:-1
position: 3676043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3676229:-1
position: 3676229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3672278-3672502:-1:exon

position:3672278:-1
position: 3672278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3672502:-1
position: 3672502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3670322-3670484:-1:exon

position:3670322:-1
position: 3670322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3670484:-1
position: 3670484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3667522-3667734:-1:exon

position:3667522:-1
position: 3667522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3667734:-1
position: 3667734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3666250-3666421:-1:exon

position:3666250:-1
position: 3666250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3666421:-1
position: 3666421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3663340-3664959:-1:exon

position:3664959:-1
position: 3664959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KLHL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: KLHL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 4
translation: MSVSGKKEFDVKQILRLRWRWFSHPSQGSAGSGGCHQQEGYEHRGTPVQSRLKSHSRDRNGLKKSSSPVHHNILAPVPGPTPVHHRSIHSWHQQSLIEQLRSSEDSPKGTEENSGKEDSSKATQELQMVTEQNAEESAERLSTTSSSLGMSTNGSDEYFQSTNHAEQTFRKMENYLQQKQLCDVLLIAGDQKIPAHRLVLSAVSDYFAAMFTNDVREAKQEEIKMEGVDPEALKALVRYAYTGILELKEDTIESLLAAACLLQLSQVIEVCCNFLMKQLHPSNCLGIRSFGDAQGCTELLKVAHTYTMEHFIEVIKNQEFLLLPANEIAKLLSSDDINVPDEEAIFQALMMWVRHDLQNRQRDLGMLLSYIRLPLLPPQLLADLENSPMFADDLECQKLLMEAMKYHLLPERRSMMQSPRTKPRKSTVGALYAVGGMDATKGTTTIEKYDLRTNSWIQIGTMNGRRLQFGVAVIDNKLYIVGGRDGLKTSNIVECFNPVTKAWTVMPPMSTHRHGLGVAMLEGPMYAVGGHDGWSYLNTVERWDPQARQWNYVASMSTPRSTVGVAALNSKLYAVGGRDGSSCLKSMECFDPHTNKWSLCASMSKRRGGVGVATYNGFLYAVGGHDAPASNHCSRLSDCVERYDPKTDAWTTVAPLSVPRDAVGICPLGDRLYAVGGYDGHSYLDTVESYDAQNNEWTEEVPVNIGRAGACVVVVKLP
SIO_010081: KLHL4
subclass of: SO_0000673
so part of: KLHL4
location: complement(join(3664900..3664959,3666250..3666421,3667522..3667734,3670322..3670484,3672278..3672502,3676043..3676229,3677282..3677494,3680254..3680450,3681376..3681512,3682391..3682561,3700077..3700495))
location: region:3664900-3700495:-1
so has part: feature:3700077-3700495:-1:exon
so has part: feature:3682391-3682561:-1:exon
so has part: feature:3681376-3681512:-1:exon
so has part: feature:3680254-3680450:-1:exon
so has part: feature:3677282-3677494:-1:exon
so has part: feature:3676043-3676229:-1:exon
so has part: feature:3672278-3672502:-1:exon
so has part: feature:3670322-3670484:-1:exon
so has part: feature:3667522-3667734:-1:exon
so has part: feature:3666250-3666421:-1:exon
so has part: feature:3664900-3664959:-1:exon

XP_021387091.1
type: Protein
SIO_000068: ncbiprotein

position:3664900:-1
position: 3664900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3700495:-1
position: 3700495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3700077-3700495:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3682391-3682561:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3681376-3681512:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3680254-3680450:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3677282-3677494:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3676043-3676229:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3672278-3672502:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3670322-3670484:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3667522-3667734:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3666250-3666421:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3664900-3664959:-1:exon

LOC110471132
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110471132
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3734619..3844378
location: region:3734619-3844378:1
so has part: feature:3734619-3844378:1:exon
subclass of: SO_0000011

110471132
type: Gene
SIO_000068: ncbigene

position:3734619:1
position: 3734619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3844378:1
position: 3844378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3734619-3844378:1:exon

LOC110471132
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110471132
product: uncharacterized LOC110471132
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002465535.2
SIO_010081: LOC110471132
subclass of: SO_0000673
so part of: LOC110471132
location: join(3734619..3734664,3744799..3744866,3776597..3776634,3778824..3778969,3780286..3780422,3840806..3840878,3844083..3844378)
location: region:3734619-3844378:1
so has part: feature:3734619-3734664:1:exon
so has part: feature:3744799-3744866:1:exon
so has part: feature:3776597-3776634:1:exon
so has part: feature:3778824-3778969:1:exon
so has part: feature:3780286-3780422:1:exon
so has part: feature:3840806-3840878:1:exon
so has part: feature:3844083-3844378:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3734619-3734664:1:exon

position:3734664:1
position: 3734664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3744799-3744866:1:exon

position:3744799:1
position: 3744799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3744866:1
position: 3744866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3776597-3776634:1:exon

position:3776597:1
position: 3776597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3776634:1
position: 3776634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3778824-3778969:1:exon

position:3778824:1
position: 3778824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3778969:1
position: 3778969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3780286-3780422:1:exon

position:3780286:1
position: 3780286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3780422:1
position: 3780422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3840806-3840878:1:exon

position:3840806:1
position: 3840806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3840878:1
position: 3840878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3844083-3844378:1:exon

position:3844083:1
position: 3844083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116183643
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116183643
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3790117..3836641
location: region:3790117-3836641:1
so has part: feature:3790117-3836641:1:exon
subclass of: SO_0000011

116183643
type: Gene
SIO_000068: ncbigene

position:3790117:1
position: 3790117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3836641:1
position: 3836641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3790117-3836641:1:exon

LOC116183643
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC116183643
product: uncharacterized LOC116183643
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004148304.1
SIO_010081: LOC116183643
subclass of: SO_0000673
so part of: LOC116183643
location: join(3790117..3790392,3834460..3836641)
location: region:3790117-3836641:1
so has part: feature:3790117-3790392:1:exon
so has part: feature:3834460-3836641:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3790117-3790392:1:exon

position:3790392:1
position: 3790392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3834460-3836641:1:exon

position:3834460:1
position: 3834460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DACH2
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: DACH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3848700..4096559)
location: region:3848700-4096559:-1
so has part: feature:3848700-4096559:-1:exon
subclass of: SO_0000010

110471133
type: Gene
SIO_000068: ncbigene

position:3848700:-1
position: 3848700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4096559:-1
position: 4096559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3848700-4096559:-1:exon

DACH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: DACH2
product: dachshund family transcription factor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021531418.2
SIO_010081: DACH2
subclass of: SO_0000673
so part of: DACH2
location: complement(join(3848700..3849648,3857432..3857497,3860521..3860640,3862000..3862147,3862665..3862810,3892162..3892242,3894688..3894823,3905572..3905744,3909359..3909514,3933952..3934083,3973968..3974083,4096075..4096559))
location: region:3848700-4096559:-1
so has part: feature:4096075-4096559:-1:exon
so has part: feature:3973968-3974083:-1:exon
so has part: feature:3933952-3934083:-1:exon
so has part: feature:3909359-3909514:-1:exon
so has part: feature:3905572-3905744:-1:exon
so has part: feature:3894688-3894823:-1:exon
so has part: feature:3892162-3892242:-1:exon
so has part: feature:3862665-3862810:-1:exon
so has part: feature:3862000-3862147:-1:exon
so has part: feature:3860521-3860640:-1:exon
so has part: feature:3857432-3857497:-1:exon
so has part: feature:3848700-3849648:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4096075-4096559:-1:exon

position:4096075:-1
position: 4096075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3973968-3974083:-1:exon

position:3973968:-1
position: 3973968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3974083:-1
position: 3974083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3933952-3934083:-1:exon

position:3933952:-1
position: 3933952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3934083:-1
position: 3934083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3909359-3909514:-1:exon

position:3909359:-1
position: 3909359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3909514:-1
position: 3909514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3905572-3905744:-1:exon

position:3905572:-1
position: 3905572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3905744:-1
position: 3905744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3894688-3894823:-1:exon

position:3894688:-1
position: 3894688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3894823:-1
position: 3894823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3892162-3892242:-1:exon

position:3892162:-1
position: 3892162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3892242:-1
position: 3892242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3862665-3862810:-1:exon

position:3862665:-1
position: 3862665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3862810:-1
position: 3862810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3862000-3862147:-1:exon

position:3862000:-1
position: 3862000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3862147:-1
position: 3862147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3860521-3860640:-1:exon

position:3860521:-1
position: 3860521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3860640:-1
position: 3860640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3857432-3857497:-1:exon

position:3857432:-1
position: 3857432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3857497:-1
position: 3857497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3848700-3849648:-1:exon

position:3849648:-1
position: 3849648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DACH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: DACH2
product: dachshund family transcription factor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021531417.2
SIO_010081: DACH2
subclass of: SO_0000673
so part of: DACH2
location: complement(join(3848700..3849648,3857432..3857497,3860497..3860640,3862000..3862147,3862665..3862810,3892162..3892242,3894688..3894823,3905572..3905744,3909359..3909514,3933952..3934083,3973968..3974083,4096075..4096559))
location: region:3848700-4096559:-1
so has part: feature:4096075-4096559:-1:exon
so has part: feature:3973968-3974083:-1:exon
so has part: feature:3933952-3934083:-1:exon
so has part: feature:3909359-3909514:-1:exon
so has part: feature:3905572-3905744:-1:exon
so has part: feature:3894688-3894823:-1:exon
so has part: feature:3892162-3892242:-1:exon
so has part: feature:3862665-3862810:-1:exon
so has part: feature:3862000-3862147:-1:exon
so has part: feature:3860497-3860640:-1:exon
so has part: feature:3857432-3857497:-1:exon
so has part: feature:3848700-3849648:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4096075-4096559:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3973968-3974083:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3933952-3934083:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3909359-3909514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3905572-3905744:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3894688-3894823:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3892162-3892242:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3862665-3862810:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3862000-3862147:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3860497-3860640:-1:exon

position:3860497:-1
position: 3860497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3857432-3857497:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3848700-3849648:-1:exon

DACH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: DACH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dachshund homolog 2 isoform X2
translation: MAVSAPPVIAATSSGGGAGGSAGLFRADPLYSSPAESPRLTNSLVNTFLSAGGGGAGAGGGGGGNECKMVDLHGVKVASFLVEGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISPVVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLYNDCTNASSRPGRPPKRSLGVAIQENARLLPHGVPGLLSPGLISPTGLTAAAMAEAMKLQKMKLMAMNSLHGSGSQNGTESENEELNSNAGGSESSWDKDKLQSPITTGSQHSIGHPTLSGQSSLGSAHPLSPLQQNHLLTNRIDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQMHSPLSRAGASVIKERIQDSPSPAPSLEDSQRPGSHASSHPSSSVSSSPSQLDNTPDRIAMLTNSREGELIDQETGTSLKKIQKEKEEVQIAIPIMKPTLDKVQLAGQALPPGFPAPFLFADGLSSVETLLTNIQGLLKVAVDNARVQEKQIQQEKKELKMELCRERELRESLERQLTAELQSRATIQKRLKKEKKAKRKLQEALEFESKRREQVEQALKQATSDAGIPDMEIEHNGTQHDSAAMQENRTYIKPTIMY
SIO_010081: DACH2
subclass of: SO_0000673
so part of: DACH2
location: complement(join(3849611..3849648,3857432..3857497,3860521..3860640,3862000..3862147,3862665..3862810,3892162..3892242,3894688..3894823,3905572..3905744,3909359..3909514,3933952..3934083,3973968..3974083,4096075..4096559))
location: region:3849611-4096559:-1
so has part: feature:4096075-4096559:-1:exon
so has part: feature:3973968-3974083:-1:exon
so has part: feature:3933952-3934083:-1:exon
so has part: feature:3909359-3909514:-1:exon
so has part: feature:3905572-3905744:-1:exon
so has part: feature:3894688-3894823:-1:exon
so has part: feature:3892162-3892242:-1:exon
so has part: feature:3862665-3862810:-1:exon
so has part: feature:3862000-3862147:-1:exon
so has part: feature:3860521-3860640:-1:exon
so has part: feature:3857432-3857497:-1:exon
so has part: feature:3849611-3849648:-1:exon

XP_021387093.1
type: Protein
SIO_000068: ncbiprotein

position:3849611:-1
position: 3849611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4096075-4096559:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3973968-3974083:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3933952-3934083:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3909359-3909514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3905572-3905744:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3894688-3894823:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3892162-3892242:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3862665-3862810:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3862000-3862147:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3860521-3860640:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3857432-3857497:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3849611-3849648:-1:exon

DACH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: DACH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dachshund homolog 2 isoform X1
translation: MAVSAPPVIAATSSGGGAGGSAGLFRADPLYSSPAESPRLTNSLVNTFLSAGGGGAGAGGGGGGNECKMVDLHGVKVASFLVEGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISPVVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLYNDCTNASSRPGRPPKRSLGVAIQENARLLPHGVPGLLSPGLISPTGLTAAAMAEAMKLQKMKLMAMNSLHGSGSQNGTESENEELNSNAGGSESSWDKDKLQSPITTGSQHSIGHPTLSGQSSLGSAHPLSPLQQNHLLTNRIDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQMHSPLSRAGASVIKERIQDSPSPAPSLEDSQRPGSHASSHPSSSVSSSPSQLDNTPDRIAMLTNSREGELIDQETGTSLKKIQKEKEEVQIAIPIMKPTLDKVQLAGQALPPGFPAPFLFADGLSSVETLLTNIQGLLKVAVDNARVQEKQIQQEKKELKMELCRERELRESLERQLTAELQSRATIQKRLKKEKKAKRKLQEALEFESKRREQVEQALKQATSGDGLRMLNDAGIPDMEIEHNGTQHDSAAMQENRTYIKPTIMY
SIO_010081: DACH2
subclass of: SO_0000673
so part of: DACH2
location: complement(join(3849611..3849648,3857432..3857497,3860497..3860640,3862000..3862147,3862665..3862810,3892162..3892242,3894688..3894823,3905572..3905744,3909359..3909514,3933952..3934083,3973968..3974083,4096075..4096559))
location: region:3849611-4096559:-1
so has part: feature:4096075-4096559:-1:exon
so has part: feature:3973968-3974083:-1:exon
so has part: feature:3933952-3934083:-1:exon
so has part: feature:3909359-3909514:-1:exon
so has part: feature:3905572-3905744:-1:exon
so has part: feature:3894688-3894823:-1:exon
so has part: feature:3892162-3892242:-1:exon
so has part: feature:3862665-3862810:-1:exon
so has part: feature:3862000-3862147:-1:exon
so has part: feature:3860497-3860640:-1:exon
so has part: feature:3857432-3857497:-1:exon
so has part: feature:3849611-3849648:-1:exon

XP_021387092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4096075-4096559:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3973968-3974083:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3933952-3934083:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3909359-3909514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3905572-3905744:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3894688-3894823:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3892162-3892242:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3862665-3862810:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3862000-3862147:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3860497-3860640:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3857432-3857497:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3849611-3849648:-1:exon

CHM
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: CHM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4114667..4167920
location: region:4114667-4167920:1
so has part: feature:4114667-4167920:1:exon
subclass of: SO_0000010

110471134
type: Gene
SIO_000068: ncbigene

position:4114667:1
position: 4114667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4167920:1
position: 4167920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4114667-4167920:1:exon

CHM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: CHM
product: CHM Rab escort protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021531420.1
SIO_010081: CHM
subclass of: SO_0000673
so part of: CHM
location: join(4114667..4114742,4124589..4124655,4130276..4130348,4131511..4131635,4135304..4135760,4136825..4136941,4137593..4137713,4139981..4140206,4149831..4149908,4154719..4154823,4155693..4155756,4156348..4156444,4158808..4158900,4161304..4161470,4165860..4167920)
location: region:4114667-4167920:1
so has part: feature:4114667-4114742:1:exon
so has part: feature:4124589-4124655:1:exon
so has part: feature:4130276-4130348:1:exon
so has part: feature:4131511-4131635:1:exon
so has part: feature:4135304-4135760:1:exon
so has part: feature:4136825-4136941:1:exon
so has part: feature:4137593-4137713:1:exon
so has part: feature:4139981-4140206:1:exon
so has part: feature:4149831-4149908:1:exon
so has part: feature:4154719-4154823:1:exon
so has part: feature:4155693-4155756:1:exon
so has part: feature:4156348-4156444:1:exon
so has part: feature:4158808-4158900:1:exon
so has part: feature:4161304-4161470:1:exon
so has part: feature:4165860-4167920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4114667-4114742:1:exon

position:4114742:1
position: 4114742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4124589-4124655:1:exon

position:4124589:1
position: 4124589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4124655:1
position: 4124655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4130276-4130348:1:exon

position:4130276:1
position: 4130276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4130348:1
position: 4130348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4131511-4131635:1:exon

position:4131511:1
position: 4131511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4131635:1
position: 4131635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4135304-4135760:1:exon

position:4135304:1
position: 4135304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4135760:1
position: 4135760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4136825-4136941:1:exon

position:4136825:1
position: 4136825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4136941:1
position: 4136941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4137593-4137713:1:exon

position:4137593:1
position: 4137593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4137713:1
position: 4137713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4139981-4140206:1:exon

position:4139981:1
position: 4139981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4140206:1
position: 4140206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4149831-4149908:1:exon

position:4149831:1
position: 4149831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4149908:1
position: 4149908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4154719-4154823:1:exon

position:4154719:1
position: 4154719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4154823:1
position: 4154823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4155693-4155756:1:exon

position:4155693:1
position: 4155693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4155756:1
position: 4155756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4156348-4156444:1:exon

position:4156348:1
position: 4156348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4156444:1
position: 4156444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4158808-4158900:1:exon

position:4158808:1
position: 4158808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4158900:1
position: 4158900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4161304-4161470:1:exon

position:4161304:1
position: 4161304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4161470:1
position: 4161470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4165860-4167920:1:exon

position:4165860:1
position: 4165860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: CHM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab proteins geranylgeranyltransferase component A 1
translation: MADNLPAEFDVVVVGTGLPESIIAAACARSGQRVLHVDSRNYYGGNWASFSFSGLLSWIKENQQKTDLSDECEEWRKLILEDEEAIPLSSKDKTIQHVEDFCFGDQDSAEGVEEAGALPKLPVFGAPAAQGVSSGPEKASPTAEGIPLGSEESPEAEGGSPGLEKENPAVQSPGEEPQSPEAEQPPSSEAARAAAGDGAGAAPGSGAAPSTAAGDSAPQPAKTEAAPSENAAQEPKKISYSQIVREGRRFNIDLVSKLLYSRGLLIELLIKSNVSRYAEFKNAMRVLAFREGKVEQVPCSRADVFNSRQLTMVEKRMLMKFLTFCLDYEQHPEEYQAYESSTFAQFLQTRKLTPSLQHFILHSIAMVSETESSTLEGLQATKKFLQCLGRYGNTPFLFPLYGQGEIPQCFCRLCAVFGGIYCLRHAVRCLVLDRASGRCKAIVDHFGQRISANYFIVEDSYLSESTCTNVCYRQISRAVLITDQSVLNTDSEQQVSVLTVPPLEPGRAAVCAIELCSSTMTCMKDTYLVHLTCPSTKTAREDLEPVVQKLFNLNTEKETENEELEKPRVLWAVYFNMRDSSGIEKSSYAGLPSNVYVCSGPDSALGNDCAVKQAETIFREMFPTEEFCPPPPNPEDIIYDEDEIEPEESGLNNSPETKPETSAEESSSEGGASVTREE
SIO_010081: CHM
subclass of: SO_0000673
so part of: CHM
location: join(4114694..4114742,4124589..4124655,4130276..4130348,4131511..4131635,4135304..4135760,4136825..4136941,4137593..4137713,4139981..4140206,4149831..4149908,4154719..4154823,4155693..4155756,4156348..4156444,4158808..4158900,4161304..4161470,4165860..4166057)
location: region:4114694-4166057:1
so has part: feature:4114694-4114742:1:exon
so has part: feature:4124589-4124655:1:exon
so has part: feature:4130276-4130348:1:exon
so has part: feature:4131511-4131635:1:exon
so has part: feature:4135304-4135760:1:exon
so has part: feature:4136825-4136941:1:exon
so has part: feature:4137593-4137713:1:exon
so has part: feature:4139981-4140206:1:exon
so has part: feature:4149831-4149908:1:exon
so has part: feature:4154719-4154823:1:exon
so has part: feature:4155693-4155756:1:exon
so has part: feature:4156348-4156444:1:exon
so has part: feature:4158808-4158900:1:exon
so has part: feature:4161304-4161470:1:exon
so has part: feature:4165860-4166057:1:exon

XP_021387095.1
type: Protein
SIO_000068: ncbiprotein

position:4114694:1
position: 4114694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4166057:1
position: 4166057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4114694-4114742:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4124589-4124655:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4130276-4130348:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4131511-4131635:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4135304-4135760:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4136825-4136941:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4137593-4137713:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4139981-4140206:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4149831-4149908:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4154719-4154823:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4155693-4155756:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4156348-4156444:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4158808-4158900:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4161304-4161470:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4165860-4166057:1:exon

POF1B
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: POF1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4207045..4222051
location: region:4207045-4222051:1
so has part: feature:4207045-4222051:1:exon
subclass of: SO_0000010

110471138
type: Gene
SIO_000068: ncbigene

position:4207045:1
position: 4207045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4222051:1
position: 4222051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4207045-4222051:1:exon

POF1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: POF1B
product: POF1B actin binding protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 74% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021531425.2
SIO_010081: POF1B
subclass of: SO_0000673
so part of: POF1B
location: join(4207045..4207341,4212280..4212318,4212703..4212804,4214248..4214421,4215308..4215438,4216359..4216386,4217204..4217278,4219464..4219556,4220086..4220199,4220353..4220505,4220616..4220726,4221324..4221452,4221732..4221805,4221895..4222051)
location: region:4207045-4222051:1
so has part: feature:4207045-4207341:1:exon
so has part: feature:4212280-4212318:1:exon
so has part: feature:4212703-4212804:1:exon
so has part: feature:4214248-4214421:1:exon
so has part: feature:4215308-4215438:1:exon
so has part: feature:4216359-4216386:1:exon
so has part: feature:4217204-4217278:1:exon
so has part: feature:4219464-4219556:1:exon
so has part: feature:4220086-4220199:1:exon
so has part: feature:4220353-4220505:1:exon
so has part: feature:4220616-4220726:1:exon
so has part: feature:4221324-4221452:1:exon
so has part: feature:4221732-4221805:1:exon
so has part: feature:4221895-4222051:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4207045-4207341:1:exon

position:4207341:1
position: 4207341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4212280-4212318:1:exon

position:4212280:1
position: 4212280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4212318:1
position: 4212318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4212703-4212804:1:exon

position:4212703:1
position: 4212703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4212804:1
position: 4212804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4214248-4214421:1:exon

position:4214248:1
position: 4214248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4214421:1
position: 4214421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4215308-4215438:1:exon

position:4215308:1
position: 4215308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4215438:1
position: 4215438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4216359-4216386:1:exon

position:4216359:1
position: 4216359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4216386:1
position: 4216386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4217204-4217278:1:exon

position:4217204:1
position: 4217204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4217278:1
position: 4217278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4219464-4219556:1:exon

position:4219464:1
position: 4219464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4219556:1
position: 4219556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4220086-4220199:1:exon

position:4220086:1
position: 4220086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4220199:1
position: 4220199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4220353-4220505:1:exon

position:4220353:1
position: 4220353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4220505:1
position: 4220505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4220616-4220726:1:exon

position:4220616:1
position: 4220616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4220726:1
position: 4220726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4221324-4221452:1:exon

position:4221324:1
position: 4221324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4221452:1
position: 4221452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4221732-4221805:1:exon

position:4221732:1
position: 4221732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4221805:1
position: 4221805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4221895-4222051:1:exon

position:4221895:1
position: 4221895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

POF1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: POF1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein POF1B
translation: MFGAQQQQQQHYYRRQQHYSTLPVRRPCPEPPPCPEPPPCPEPARPPPCLDPAPHQQQDGAVAYDRVRTYGPGCRRVSTSCSSRAASPLDCGHGCDPPQGTIRRIIIENPDQEPLSPFLRGASFSPGNNVIYEKTIRKYELLNPLQERQFQVCPPEPCQQCPPLPVTQQCQQTQTGSPCELCPGPGSDECRGHPVRRGTAPPELVSCPQDSPEQLDCRFFGELLAELHRKSNDLYSCLLQHVEKIGTRNHDIEFTCQTEDIEELIPKGLSEATKQQIRYLLQMRATSDRSLRLVLSTFKNLREELCHLQDDLGKLETDNVLLKKDLAFKDSQVKEYETMLASLRENNRQQQQGLRDSTARCRSLEEQLLSLRLSEGNKDCQLKELEYSKRALEQEIQSLKLQSCSSPTLQTTTDELSSRYVEMINSLREDKDREIRSLRTQLCQFQQDITRREGSNSDLQMRLHELTSLLEDKEAFIKQQQEELFRLKHEKLSGSQSPGVTAIITKKYRNQYPILGLLSDDYKVTSPVNKSQTIVIERTGEIWKHVSVPGDGLFPLQS
SIO_010081: POF1B
subclass of: SO_0000673
so part of: POF1B
location: join(4207045..4207341,4212280..4212318,4212703..4212804,4214248..4214421,4215308..4215438,4216359..4216386,4217204..4217278,4219464..4219556,4220086..4220199,4220353..4220505,4220616..4220726,4221324..4221452,4221732..4221805,4221895..4222051)
location: region:4207045-4222051:1
so has part: feature:4207045-4207341:1:exon
so has part: feature:4212280-4212318:1:exon
so has part: feature:4212703-4212804:1:exon
so has part: feature:4214248-4214421:1:exon
so has part: feature:4215308-4215438:1:exon
so has part: feature:4216359-4216386:1:exon
so has part: feature:4217204-4217278:1:exon
so has part: feature:4219464-4219556:1:exon
so has part: feature:4220086-4220199:1:exon
so has part: feature:4220353-4220505:1:exon
so has part: feature:4220616-4220726:1:exon
so has part: feature:4221324-4221452:1:exon
so has part: feature:4221732-4221805:1:exon
so has part: feature:4221895-4222051:1:exon

XP_021387100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4207045-4207341:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4212280-4212318:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4212703-4212804:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4214248-4214421:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4215308-4215438:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4216359-4216386:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4217204-4217278:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4219464-4219556:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4220086-4220199:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4220353-4220505:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4220616-4220726:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4221324-4221452:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4221732-4221805:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4221895-4222051:1:exon

ZNF711
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: ZNF711
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4226816..4247095)
location: region:4226816-4247095:-1
so has part: feature:4226816-4247095:-1:exon
subclass of: SO_0000010

110471135
type: Gene
SIO_000068: ncbigene

position:4226816:-1
position: 4226816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4247095:-1
position: 4247095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4226816-4247095:-1:exon

ZNF711
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ZNF711
product: zinc finger protein 711, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021531422.1
SIO_010081: ZNF711
subclass of: SO_0000673
so part of: ZNF711
location: complement(join(4226816..4229684,4230256..4230291,4230806..4230853,4231985..4232122,4232693..4232839,4233647..4233805,4240975..4241505,4242296..4242400,4247024..4247095))
location: region:4226816-4247095:-1
so has part: feature:4247024-4247095:-1:exon
so has part: feature:4242296-4242400:-1:exon
so has part: feature:4240975-4241505:-1:exon
so has part: feature:4233647-4233805:-1:exon
so has part: feature:4232693-4232839:-1:exon
so has part: feature:4231985-4232122:-1:exon
so has part: feature:4230806-4230853:-1:exon
so has part: feature:4230256-4230291:-1:exon
so has part: feature:4226816-4229684:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4247024-4247095:-1:exon

position:4247024:-1
position: 4247024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4242296-4242400:-1:exon

position:4242296:-1
position: 4242296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4242400:-1
position: 4242400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4240975-4241505:-1:exon

position:4240975:-1
position: 4240975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4241505:-1
position: 4241505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4233647-4233805:-1:exon

position:4233647:-1
position: 4233647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4233805:-1
position: 4233805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4232693-4232839:-1:exon

position:4232693:-1
position: 4232693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4232839:-1
position: 4232839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4231985-4232122:-1:exon

position:4231985:-1
position: 4231985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4232122:-1
position: 4232122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4230806-4230853:-1:exon

position:4230806:-1
position: 4230806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4230853:-1
position: 4230853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4230256-4230291:-1:exon

position:4230256:-1
position: 4230256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4230291:-1
position: 4230291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4226816-4229684:-1:exon

position:4229684:-1
position: 4229684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF711
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: ZNF711
product: zinc finger protein 711, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_021531421.1
SIO_010081: ZNF711
subclass of: SO_0000673
so part of: ZNF711
location: complement(join(4226816..4229684,4230148..4230291,4230806..4230853,4231985..4232122,4232693..4232839,4233647..4233805,4240975..4241505,4242296..4242400,4247024..4247095))
location: region:4226816-4247095:-1
so has part: feature:4247024-4247095:-1:exon
so has part: feature:4242296-4242400:-1:exon
so has part: feature:4240975-4241505:-1:exon
so has part: feature:4233647-4233805:-1:exon
so has part: feature:4232693-4232839:-1:exon
so has part: feature:4231985-4232122:-1:exon
so has part: feature:4230806-4230853:-1:exon
so has part: feature:4230148-4230291:-1:exon
so has part: feature:4226816-4229684:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4247024-4247095:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4242296-4242400:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4240975-4241505:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4233647-4233805:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4232693-4232839:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4231985-4232122:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4230806-4230853:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4230148-4230291:-1:exon

position:4230148:-1
position: 4230148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4226816-4229684:-1:exon

ZNF711
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ZNF711
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 711 isoform X2
translation: MDPGGGSLGLQTQESKMPHTMIMQDFVAGMAGTAHIDGDHIVVSVPEAVLVSDVVTDDGITLDHGLAAEVVQGPDIITETDVVTEGVIVPDSVLEADVAIEEALDTGDHVLTSDLITETVRVPDQVFVADLVTGPEGHLEHVVQDSVAGADSPTMVSEEVLVTNSDSEAVIQAAGTVPGSTVTIKTEDDDDGKSTSEDYLMISLDDVGEKLDHIGSTPLKISTEVANDDVAKDDGFGSEVIKVYIFKAEAEDDVEIGGTEIVTESDFHNGHSVAGVIEQGGVGRMQREKMVYMAVKDSSQEDEDISCAEIADEVYMEVIVGEEEATSLPDTQLEDSGVNKTFVPVAWAAAYGDERRLPRRYEDGQAAGNNLDTRLENKNAVIIGPDGQPLTVYPCHICGKKFKSRGFLKRHMKNHPDHMIKKKYQCTDCDFTTNKKVSFHNHLESHKLINKVDKTHEFTEYTRRYREASPLSSNKLILRDKEPKLHKCKYCDYETAEQGLLNRHLLAVHSKNFPHVCVECGKGFRHPSELKKHMRTHTGEKPYQCQHCVFRCADQSNLKTHIKTKHGTDLPFKCEHCPQAFADEKELQQHTELFQGHKTHQCPHCDHKSTNSSDLKRHIISVHTKDFPHKCEVCEKGFHRPSELKKHSETHKGKKIHQCRHCDFKTSDPFVLSGHILSVHTKDLPFKCKRCKRGFRQQNELKKHMKTHSGRKVYQCQYCEYSTTDASGFKRHVISIHTKDYPHRCEFCKKGFRRPSEKNQHIMRHHKEAIM
SIO_010081: ZNF711
subclass of: SO_0000673
so part of: ZNF711
location: complement(join(4228507..4229684,4230256..4230291,4230806..4230853,4231985..4232122,4232693..4232839,4233647..4233805,4240975..4241505,4242296..4242374))
location: region:4228507-4242374:-1
so has part: feature:4242296-4242374:-1:exon
so has part: feature:4240975-4241505:-1:exon
so has part: feature:4233647-4233805:-1:exon
so has part: feature:4232693-4232839:-1:exon
so has part: feature:4231985-4232122:-1:exon
so has part: feature:4230806-4230853:-1:exon
so has part: feature:4230256-4230291:-1:exon
so has part: feature:4228507-4229684:-1:exon

XP_021387097.1
type: Protein
SIO_000068: ncbiprotein

position:4228507:-1
position: 4228507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4242374:-1
position: 4242374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4242296-4242374:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4240975-4241505:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4233647-4233805:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4232693-4232839:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4231985-4232122:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4230806-4230853:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4230256-4230291:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4228507-4229684:-1:exon

ZNF711
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: ZNF711
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 711 isoform X1
translation: MDPGGGSLGLQTQESKMPHTMIMQDFVAGMAGTAHIDGDHIVVSVPEAVLVSDVVTDDGITLDHGLAAEVVQGPDIITETDVVTEGVIVPDSVLEADVAIEEALDTGDHVLTSDLITETVRVPDQVFVADLVTGPEGHLEHVVQDSVAGADSPTMVSEEVLVTNSDSEAVIQAAGTVPGSTVTIKTEDDDDGKSTSEDYLMISLDDVGEKLDHIGSTPLKISTEVANDDVAKDDGFGSEVIKVYIFKAEAEDDVEIGGTEIVTESDFHNGHSVAGVIEQGGVGRMQREKMVYMAVKDSSQEDEDISCAEIADEVYMEVIVGEEEATSLPDTQLEDSGVNKTFVPVAWAAAYGDERRLPRRYEDGQAAGNNLDTRLENKNGNATQYLQICDSISTNRVLKQKTKKRRRGEARQWQTAVIIGPDGQPLTVYPCHICGKKFKSRGFLKRHMKNHPDHMIKKKYQCTDCDFTTNKKVSFHNHLESHKLINKVDKTHEFTEYTRRYREASPLSSNKLILRDKEPKLHKCKYCDYETAEQGLLNRHLLAVHSKNFPHVCVECGKGFRHPSELKKHMRTHTGEKPYQCQHCVFRCADQSNLKTHIKTKHGTDLPFKCEHCPQAFADEKELQQHTELFQGHKTHQCPHCDHKSTNSSDLKRHIISVHTKDFPHKCEVCEKGFHRPSELKKHSETHKGKKIHQCRHCDFKTSDPFVLSGHILSVHTKDLPFKCKRCKRGFRQQNELKKHMKTHSGRKVYQCQYCEYSTTDASGFKRHVISIHTKDYPHRCEFCKKGFRRPSEKNQHIMRHHKEAIM
SIO_010081: ZNF711
subclass of: SO_0000673
so part of: ZNF711
location: complement(join(4228507..4229684,4230148..4230291,4230806..4230853,4231985..4232122,4232693..4232839,4233647..4233805,4240975..4241505,4242296..4242374))
location: region:4228507-4242374:-1
so has part: feature:4242296-4242374:-1:exon
so has part: feature:4240975-4241505:-1:exon
so has part: feature:4233647-4233805:-1:exon
so has part: feature:4232693-4232839:-1:exon
so has part: feature:4231985-4232122:-1:exon
so has part: feature:4230806-4230853:-1:exon
so has part: feature:4230148-4230291:-1:exon
so has part: feature:4228507-4229684:-1:exon

XP_021387096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4242296-4242374:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4240975-4241505:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4233647-4233805:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4232693-4232839:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4231985-4232122:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4230806-4230853:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4230148-4230291:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4228507-4229684:-1:exon

APOOL
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: APOOL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4262106..4271508)
location: region:4262106-4271508:-1
so has part: feature:4262106-4271508:-1:exon
subclass of: SO_0000010

110471137
type: Gene
SIO_000068: ncbigene

position:4262106:-1
position: 4262106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4271508:-1
position: 4271508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4262106-4271508:-1:exon

APOOL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: APOOL
product: apolipoprotein O like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_021531423.2
SIO_010081: APOOL
subclass of: SO_0000673
so part of: APOOL
location: complement(join(4262106..4262523,4263777..4263933,4265515..4265601,4265950..4266041,4266385..4266483,4266613..4266667,4267649..4267768,4268337..4268441,4271476..4271508))
location: region:4262106-4271508:-1
so has part: feature:4271476-4271508:-1:exon
so has part: feature:4268337-4268441:-1:exon
so has part: feature:4267649-4267768:-1:exon
so has part: feature:4266613-4266667:-1:exon
so has part: feature:4266385-4266483:-1:exon
so has part: feature:4265950-4266041:-1:exon
so has part: feature:4265515-4265601:-1:exon
so has part: feature:4263777-4263933:-1:exon
so has part: feature:4262106-4262523:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4271476-4271508:-1:exon

position:4271476:-1
position: 4271476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4268337-4268441:-1:exon

position:4268337:-1
position: 4268337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4268441:-1
position: 4268441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4267649-4267768:-1:exon

position:4267649:-1
position: 4267649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4267768:-1
position: 4267768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4266613-4266667:-1:exon

position:4266613:-1
position: 4266613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4266667:-1
position: 4266667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4266385-4266483:-1:exon

position:4266385:-1
position: 4266385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4266483:-1
position: 4266483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4265950-4266041:-1:exon

position:4265950:-1
position: 4265950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4266041:-1
position: 4266041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4265515-4265601:-1:exon

position:4265515:-1
position: 4265515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4265601:-1
position: 4265601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4263777-4263933:-1:exon

position:4263777:-1
position: 4263777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4263933:-1
position: 4263933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4262106-4262523:-1:exon

position:4262523:-1
position: 4262523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

APOOL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: APOOL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MICOS complex subunit MIC27
translation: MAAKVAKLAAVSSGLPFVCITVYAATEKESKSQLVKPDKLPIYSAPPLSSRYVEEQPGLLQQQLTALRRTTGRYFGWCQSVYVFVKNGIMDSIQFGKDAYVYLNNPPPEFLPKAAVITVSGLAGAVLARKGSRFKKIAYPLGLTTVGYSVCYPAQSVVIAKVTGKKLLCASHQTYEAVRSLWADKETVTKLQQESKPIMQEDKKKKGISTIKPESAVESRSLNRTESFPVESWSNEDPVPSSGAVKTSKFKPDPKLTDHGQSSPEDVDMYSTRS
SIO_010081: APOOL
subclass of: SO_0000673
so part of: APOOL
location: complement(join(4262426..4262523,4263777..4263933,4265515..4265601,4265950..4266041,4266385..4266483,4266613..4266667,4267649..4267768,4268337..4268441,4271476..4271487))
location: region:4262426-4271487:-1
so has part: feature:4271476-4271487:-1:exon
so has part: feature:4268337-4268441:-1:exon
so has part: feature:4267649-4267768:-1:exon
so has part: feature:4266613-4266667:-1:exon
so has part: feature:4266385-4266483:-1:exon
so has part: feature:4265950-4266041:-1:exon
so has part: feature:4265515-4265601:-1:exon
so has part: feature:4263777-4263933:-1:exon
so has part: feature:4262426-4262523:-1:exon

XP_021387098.1
type: Protein
SIO_000068: ncbiprotein

position:4262426:-1
position: 4262426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4271487:-1
position: 4271487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4271476-4271487:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4268337-4268441:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4267649-4267768:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4266613-4266667:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4266385-4266483:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4265950-4266041:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4265515-4265601:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4263777-4263933:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4262426-4262523:-1:exon

LOC110471139
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110471139
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4272254..4456031)
location: region:4272254-4456031:-1
so has part: feature:4272254-4456031:-1:exon
subclass of: SO_0000010

110471139
type: Gene
SIO_000068: ncbigene

position:4272254:-1
position: 4272254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4456031:-1
position: 4456031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4272254-4456031:-1:exon

LOC110471139
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110471139
product: connector enhancer of kinase suppressor of ras 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031504776.1
SIO_010081: LOC110471139
subclass of: SO_0000673
so part of: LOC110471139
location: complement(join(4272254..4279582,4280247..4280446,4280734..4281241,4282549..4282652,4283407..4283477,4293346..4293417,4298830..4298903,4300291..4300466,4301506..4301554,4304356..4304404,4309064..4309098,4319131..4319385,4320908..4320993,4324735..4324940,4325493..4325626,4329712..4329858,4350143..4350211,4353793..4353852,4362974..4363093,4365540..4365581,4371977..4372064,4373359..4373561,4393763..4393926,4455339..4455412,4455670..4456031))
location: region:4272254-4456031:-1
so has part: feature:4455670-4456031:-1:exon
so has part: feature:4455339-4455412:-1:exon
so has part: feature:4393763-4393926:-1:exon
so has part: feature:4373359-4373561:-1:exon
so has part: feature:4371977-4372064:-1:exon
so has part: feature:4365540-4365581:-1:exon
so has part: feature:4362974-4363093:-1:exon
so has part: feature:4353793-4353852:-1:exon
so has part: feature:4350143-4350211:-1:exon
so has part: feature:4329712-4329858:-1:exon
so has part: feature:4325493-4325626:-1:exon
so has part: feature:4324735-4324940:-1:exon
so has part: feature:4320908-4320993:-1:exon
so has part: feature:4319131-4319385:-1:exon
so has part: feature:4309064-4309098:-1:exon
so has part: feature:4304356-4304404:-1:exon
so has part: feature:4301506-4301554:-1:exon
so has part: feature:4300291-4300466:-1:exon
so has part: feature:4298830-4298903:-1:exon
so has part: feature:4293346-4293417:-1:exon
so has part: feature:4283407-4283477:-1:exon
so has part: feature:4282549-4282652:-1:exon
so has part: feature:4280734-4281241:-1:exon
so has part: feature:4280247-4280446:-1:exon
so has part: feature:4272254-4279582:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4455670-4456031:-1:exon

position:4455670:-1
position: 4455670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4455339-4455412:-1:exon

position:4455339:-1
position: 4455339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4455412:-1
position: 4455412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4393763-4393926:-1:exon

position:4393763:-1
position: 4393763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4393926:-1
position: 4393926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4373359-4373561:-1:exon

position:4373359:-1
position: 4373359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4373561:-1
position: 4373561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4371977-4372064:-1:exon

position:4371977:-1
position: 4371977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4372064:-1
position: 4372064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4365540-4365581:-1:exon

position:4365540:-1
position: 4365540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4365581:-1
position: 4365581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4362974-4363093:-1:exon

position:4362974:-1
position: 4362974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4363093:-1
position: 4363093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4353793-4353852:-1:exon

position:4353793:-1
position: 4353793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4353852:-1
position: 4353852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4350143-4350211:-1:exon

position:4350143:-1
position: 4350143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4350211:-1
position: 4350211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4329712-4329858:-1:exon

position:4329712:-1
position: 4329712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4329858:-1
position: 4329858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4325493-4325626:-1:exon

position:4325493:-1
position: 4325493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4325626:-1
position: 4325626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4324735-4324940:-1:exon

position:4324735:-1
position: 4324735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4324940:-1
position: 4324940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4320908-4320993:-1:exon

position:4320908:-1
position: 4320908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4320993:-1
position: 4320993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4319131-4319385:-1:exon

position:4319131:-1
position: 4319131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4319385:-1
position: 4319385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4309064-4309098:-1:exon

position:4309064:-1
position: 4309064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4309098:-1
position: 4309098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4304356-4304404:-1:exon

position:4304356:-1
position: 4304356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4304404:-1
position: 4304404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4301506-4301554:-1:exon

position:4301506:-1
position: 4301506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4301554:-1
position: 4301554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4300291-4300466:-1:exon

position:4300291:-1
position: 4300291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4300466:-1
position: 4300466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4298830-4298903:-1:exon

position:4298830:-1
position: 4298830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4298903:-1
position: 4298903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4293346-4293417:-1:exon

position:4293346:-1
position: 4293346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4293417:-1
position: 4293417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4283407-4283477:-1:exon

position:4283407:-1
position: 4283407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4283477:-1
position: 4283477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4282549-4282652:-1:exon

position:4282549:-1
position: 4282549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4282652:-1
position: 4282652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4280734-4281241:-1:exon

position:4280734:-1
position: 4280734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4281241:-1
position: 4281241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4280247-4280446:-1:exon

position:4280247:-1
position: 4280247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4280446:-1
position: 4280446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4272254-4279582:-1:exon

position:4279582:-1
position: 4279582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110471139
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110471139
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: connector enhancer of kinase suppressor of ras 2
translation: MPCFIRAWLGGHSLCDLMMALVMEPISKWTPKQVVDWMKGLDDCLQQYIKNFEREKINGEQLLHITHQELEELGVTRIGHQELILEAVDLLCALNYGLETENLRTLSHKLNASAKNLQNFITGRRRSGHYDGRASRRLPNDFLTSVVDLIGAAKNLLAWLDRSPFVSVTEYSLLKNNIVQLCLELTTIVQQDCTVYETENKILHVCKTLSGICDHIISLSSDSLVSQSAHLEVVHLTSIMPSEGLGMYIKSTYDGLHVITGTTENSPADQCKKIHAGDEVIQVNHQTVVGWQLKNLVNALWEDPNGVILTLKKRPQNTLVSAPALLKNVRWKPLALQPVIPTSPTSSSTTPTSTMGMSSKMDNSALQDVFILSPMSGLYGPRDEIGIMSCDDISKFGKSGMKGSESPNYFLEHESGKYYTLIEGEGHPGGSEYERSRASGVRRREKTPTHGDLRPVSMPTEYSWIGESKEQNMYKRGSRDSENSLLRYLSDDKILVIQEEPLAQKDSKRDTGRRSRKKGKGPGNAGYPISPSVLASTGSARLEPGQQDVLSFSLAESNTVPLYHRAGDTVSGDTERYASSAIDHPGNTSMRKSFHYASLRVKSRKWSKGSSLSSVSRRRISCKDLGHGDCEGWLWKKKDAKGYFTQKWKKYWFILKDSSLYWYTNQNDEKAEGFISLPEFRIDRAIECRRKHAFKACHPKIKSFYFATDCLEEMNRWMNRLGLAAIGYTPDDKDIHPDEADYWSESDQDDMDGSLTLKQEGSSTLCDTYHRTPSVNSSSPFPEAKQGRHFSSESTYSHSSAEDSRQDAAGSTHSSGCRPPYRERRSWQDLIETPLTSSGLHFLQTVPAEAEYASGRPGMSPDRRRQATLPVQRRHNFEQDGPFPLVECPRGHSSHGWPQKPRSQSLPRNRDVRGKGRVKSIEGTDDSLDEKVPIRRHNSFCAEENIKEIEEITDGLQELYRTLEEASLSAFGEQRPSTKQEFRKSFVKRCNDPVINEKLHHIRVLKSTLKAKEGDLTIINSLLDDPNLTSKKFKDWKLKNYEFFLDICEYSAAGKPQNGASELASSAPMLTHTHSFIETHV
SIO_010081: LOC110471139
subclass of: SO_0000673
so part of: LOC110471139
location: complement(join(4279367..4279582,4280247..4280446,4280734..4281241,4282549..4282652,4283407..4283477,4293346..4293417,4298830..4298903,4300291..4300466,4301506..4301554,4304356..4304404,4309064..4309098,4319131..4319385,4320908..4320993,4324735..4324940,4325493..4325626,4329712..4329858,4350143..4350211,4353793..4353852,4362974..4363093,4365540..4365581,4371977..4372064,4373359..4373561,4393763..4393926,4455339..4455412,4455670..4455715))
location: region:4279367-4455715:-1
so has part: feature:4455670-4455715:-1:exon
so has part: feature:4455339-4455412:-1:exon
so has part: feature:4393763-4393926:-1:exon
so has part: feature:4373359-4373561:-1:exon
so has part: feature:4371977-4372064:-1:exon
so has part: feature:4365540-4365581:-1:exon
so has part: feature:4362974-4363093:-1:exon
so has part: feature:4353793-4353852:-1:exon
so has part: feature:4350143-4350211:-1:exon
so has part: feature:4329712-4329858:-1:exon
so has part: feature:4325493-4325626:-1:exon
so has part: feature:4324735-4324940:-1:exon
so has part: feature:4320908-4320993:-1:exon
so has part: feature:4319131-4319385:-1:exon
so has part: feature:4309064-4309098:-1:exon
so has part: feature:4304356-4304404:-1:exon
so has part: feature:4301506-4301554:-1:exon
so has part: feature:4300291-4300466:-1:exon
so has part: feature:4298830-4298903:-1:exon
so has part: feature:4293346-4293417:-1:exon
so has part: feature:4283407-4283477:-1:exon
so has part: feature:4282549-4282652:-1:exon
so has part: feature:4280734-4281241:-1:exon
so has part: feature:4280247-4280446:-1:exon
so has part: feature:4279367-4279582:-1:exon

XP_031360636.1
type: Protein
SIO_000068: ncbiprotein

position:4279367:-1
position: 4279367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4455715:-1
position: 4455715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4455670-4455715:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4455339-4455412:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4393763-4393926:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4373359-4373561:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4371977-4372064:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4365540-4365581:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4362974-4363093:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4353793-4353852:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4350143-4350211:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4329712-4329858:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4325493-4325626:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4324735-4324940:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4320908-4320993:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4319131-4319385:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4309064-4309098:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4304356-4304404:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4301506-4301554:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4300291-4300466:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4298830-4298903:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4293346-4293417:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4283407-4283477:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4282549-4282652:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4280734-4281241:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4280247-4280446:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4279367-4279582:-1:exon

HDX
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: HDX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4475246..4508414
location: region:4475246-4508414:1
so has part: feature:4475246-4508414:1:exon
subclass of: SO_0000010

110477805
type: Gene
SIO_000068: ncbigene

position:4475246:1
position: 4475246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4508414:1
position: 4508414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4475246-4508414:1:exon

HDX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: HDX
product: highly divergent homeobox
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021543902.1
SIO_010081: HDX
subclass of: SO_0000673
so part of: HDX
location: join(4475246..4475438,4483312..4483458,4485376..4486494,4490242..4490295,4496617..4496763,4500094..4500301,4503277..4503356,4504936..4505019,4507136..4507258,4508216..4508414)
location: region:4475246-4508414:1
so has part: feature:4475246-4475438:1:exon
so has part: feature:4483312-4483458:1:exon
so has part: feature:4485376-4486494:1:exon
so has part: feature:4490242-4490295:1:exon
so has part: feature:4496617-4496763:1:exon
so has part: feature:4500094-4500301:1:exon
so has part: feature:4503277-4503356:1:exon
so has part: feature:4504936-4505019:1:exon
so has part: feature:4507136-4507258:1:exon
so has part: feature:4508216-4508414:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4475246-4475438:1:exon

position:4475438:1
position: 4475438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4483312-4483458:1:exon

position:4483312:1
position: 4483312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4483458:1
position: 4483458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4485376-4486494:1:exon

position:4485376:1
position: 4485376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4486494:1
position: 4486494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4490242-4490295:1:exon

position:4490242:1
position: 4490242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4490295:1
position: 4490295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4496617-4496763:1:exon

position:4496617:1
position: 4496617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4496763:1
position: 4496763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4500094-4500301:1:exon

position:4500094:1
position: 4500094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4500301:1
position: 4500301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4503277-4503356:1:exon

position:4503277:1
position: 4503277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4503356:1
position: 4503356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4504936-4505019:1:exon

position:4504936:1
position: 4504936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4505019:1
position: 4505019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4507136-4507258:1:exon

position:4507136:1
position: 4507136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4507258:1
position: 4507258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4508216-4508414:1:exon

position:4508216:1
position: 4508216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HDX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: HDX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: highly divergent homeobox
translation: MNVRSVFTVEQQRILQRYYENGMTNQSKNCFQLILQCAQETKLDFSVVRTWVGNKRRKMSSKIAVESGGTPPATAPATPSMPPEAAVKNVVNIARSQSQQSSWTSSNNDVIVTGIYSPARSSGWPGASKHTNASVAELHKTSIPRLPGKSDADFQQQHIPLGRQVPHCKNASLLVGEKTIILSRQTSVLNSANSIYSHTKKSYGSSSVQTAELVLPQKPMIFHRPCRAEPLACQRLHKPEPAALASHVPPGPRAHPRDPACGTQNLEIREVFSLAVTDQPQRLVAGSAPQKQPSPEGSCLSIAMETGDVEDEYAREEELASMGAQIHSYSRYCEGSGSGRGDNQSAAAPGRSGGCGAQPGGARDVPDNLLYHSREFHLPARTSLHTTSSTIYNPANAARSTFSPHFTSSSQLRLSQNQNNYQISGNLTVPWITGCSRKRALQDRTQFSDRDLATLKKYWDNGMTSLGSVCREKIEAVAAELNVDCEIVRTWIGNRRRKYRLMGIEVPPPRGGPADFSDQSEFVSKSALNPGEETATEVGDDNDRNDEVSICLSEGSSQEETNEALQNEEIGHKDDDQNPVSTDNVKIEILDDEESDLISNSEVDQMSSLLDYKNEEVRFIESQLESHKQKYFELQMFTRSLILAIKSDDKEQQQALLSDLPPELEEMDFNHTSPELDDTSFSLSSLSEKNASDSL
SIO_010081: HDX
subclass of: SO_0000673
so part of: HDX
location: join(4483312..4483458,4485376..4486494,4490242..4490295,4496617..4496763,4500094..4500301,4503277..4503356,4504936..4505019,4507136..4507258,4508216..4508341)
location: region:4483312-4508341:1
so has part: feature:4483312-4483458:1:exon
so has part: feature:4485376-4486494:1:exon
so has part: feature:4490242-4490295:1:exon
so has part: feature:4496617-4496763:1:exon
so has part: feature:4500094-4500301:1:exon
so has part: feature:4503277-4503356:1:exon
so has part: feature:4504936-4505019:1:exon
so has part: feature:4507136-4507258:1:exon
so has part: feature:4508216-4508341:1:exon

XP_021399577.1
type: Protein
SIO_000068: ncbiprotein

position:4508341:1
position: 4508341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4483312-4483458:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4485376-4486494:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4490242-4490295:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4496617-4496763:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4500094-4500301:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4503277-4503356:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4504936-4505019:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4507136-4507258:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4508216-4508341:1:exon

RPS6KA6
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: RPS6KA6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4531391..4568607
location: region:4531391-4568607:1
so has part: feature:4531391-4568607:1:exon
subclass of: SO_0000010

110477804
type: Gene
SIO_000068: ncbigene

position:4531391:1
position: 4531391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4568607:1
position: 4568607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4531391-4568607:1:exon

RPS6KA6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: RPS6KA6
product: ribosomal protein S6 kinase A6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_021543897.2
SIO_010081: RPS6KA6
subclass of: SO_0000673
so part of: RPS6KA6
location: join(4531391..4531524,4539434..4539493,4543103..4543219,4545792..4545873,4546589..4546669,4547526..4547605,4550538..4550644,4550910..4550947,4551968..4552110,4552870..4552940,4554203..4554291,4554700..4554764,4556563..4556665,4557709..4557833,4558111..4558236,4558690..4558779,4559390..4559548,4559972..4560133,4560522..4560598,4561281..4561398,4562439..4562579,4563451..4568607)
location: region:4531391-4568607:1
so has part: feature:4531391-4531524:1:exon
so has part: feature:4539434-4539493:1:exon
so has part: feature:4543103-4543219:1:exon
so has part: feature:4545792-4545873:1:exon
so has part: feature:4546589-4546669:1:exon
so has part: feature:4547526-4547605:1:exon
so has part: feature:4550538-4550644:1:exon
so has part: feature:4550910-4550947:1:exon
so has part: feature:4551968-4552110:1:exon
so has part: feature:4552870-4552940:1:exon
so has part: feature:4554203-4554291:1:exon
so has part: feature:4554700-4554764:1:exon
so has part: feature:4556563-4556665:1:exon
so has part: feature:4557709-4557833:1:exon
so has part: feature:4558111-4558236:1:exon
so has part: feature:4558690-4558779:1:exon
so has part: feature:4559390-4559548:1:exon
so has part: feature:4559972-4560133:1:exon
so has part: feature:4560522-4560598:1:exon
so has part: feature:4561281-4561398:1:exon
so has part: feature:4562439-4562579:1:exon
so has part: feature:4563451-4568607:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4531391-4531524:1:exon

position:4531524:1
position: 4531524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4539434-4539493:1:exon

position:4539434:1
position: 4539434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4539493:1
position: 4539493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4543103-4543219:1:exon

position:4543103:1
position: 4543103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4543219:1
position: 4543219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4545792-4545873:1:exon

position:4545792:1
position: 4545792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4545873:1
position: 4545873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4546589-4546669:1:exon

position:4546589:1
position: 4546589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4546669:1
position: 4546669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4547526-4547605:1:exon

position:4547526:1
position: 4547526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4547605:1
position: 4547605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4550538-4550644:1:exon

position:4550538:1
position: 4550538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4550644:1
position: 4550644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4550910-4550947:1:exon

position:4550910:1
position: 4550910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4550947:1
position: 4550947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4551968-4552110:1:exon

position:4551968:1
position: 4551968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4552110:1
position: 4552110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4552870-4552940:1:exon

position:4552870:1
position: 4552870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4552940:1
position: 4552940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4554203-4554291:1:exon

position:4554203:1
position: 4554203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4554291:1
position: 4554291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4554700-4554764:1:exon

position:4554700:1
position: 4554700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4554764:1
position: 4554764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4556563-4556665:1:exon

position:4556563:1
position: 4556563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4556665:1
position: 4556665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4557709-4557833:1:exon

position:4557709:1
position: 4557709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4557833:1
position: 4557833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4558111-4558236:1:exon

position:4558111:1
position: 4558111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4558236:1
position: 4558236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4558690-4558779:1:exon

position:4558690:1
position: 4558690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4558779:1
position: 4558779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4559390-4559548:1:exon

position:4559390:1
position: 4559390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4559548:1
position: 4559548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4559972-4560133:1:exon

position:4559972:1
position: 4559972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4560133:1
position: 4560133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4560522-4560598:1:exon

position:4560522:1
position: 4560522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4560598:1
position: 4560598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4561281-4561398:1:exon

position:4561281:1
position: 4561281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4561398:1
position: 4561398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4562439-4562579:1:exon

position:4562439:1
position: 4562439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4562579:1
position: 4562579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4563451-4568607:1:exon

position:4563451:1
position: 4563451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPS6KA6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: RPS6KA6
product: ribosomal protein S6 kinase A6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_021543898.1
SIO_010081: RPS6KA6
subclass of: SO_0000673
so part of: RPS6KA6
location: join(4531391..4531524,4539434..4539493,4543103..4543219,4545792..4545873,4546589..4546669,4547526..4547605,4550538..4550644,4550910..4550947,4551968..4552110,4552870..4552940,4554203..4554291,4554700..4554764,4556563..4556665,4557709..4557833,4558114..4558236,4558690..4558779,4559390..4559548,4559972..4560133,4560522..4560598,4561281..4561398,4562439..4562579,4563451..4563726)
location: region:4531391-4563726:1
so has part: feature:4531391-4531524:1:exon
so has part: feature:4539434-4539493:1:exon
so has part: feature:4543103-4543219:1:exon
so has part: feature:4545792-4545873:1:exon
so has part: feature:4546589-4546669:1:exon
so has part: feature:4547526-4547605:1:exon
so has part: feature:4550538-4550644:1:exon
so has part: feature:4550910-4550947:1:exon
so has part: feature:4551968-4552110:1:exon
so has part: feature:4552870-4552940:1:exon
so has part: feature:4554203-4554291:1:exon
so has part: feature:4554700-4554764:1:exon
so has part: feature:4556563-4556665:1:exon
so has part: feature:4557709-4557833:1:exon
so has part: feature:4558114-4558236:1:exon
so has part: feature:4558690-4558779:1:exon
so has part: feature:4559390-4559548:1:exon
so has part: feature:4559972-4560133:1:exon
so has part: feature:4560522-4560598:1:exon
so has part: feature:4561281-4561398:1:exon
so has part: feature:4562439-4562579:1:exon
so has part: feature:4563451-4563726:1:exon

position:4563726:1
position: 4563726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4531391-4531524:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4539434-4539493:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4543103-4543219:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4545792-4545873:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4546589-4546669:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4547526-4547605:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4550538-4550644:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4550910-4550947:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4551968-4552110:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4552870-4552940:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4554203-4554291:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4554700-4554764:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4556563-4556665:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4557709-4557833:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4558114-4558236:1:exon

position:4558114:1
position: 4558114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4558690-4558779:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4559390-4559548:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4559972-4560133:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4560522-4560598:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4561281-4561398:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4562439-4562579:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4563451-4563726:1:exon

RPS6KA6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: RPS6KA6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal protein S6 kinase alpha-6 isoform X1
translation: MVPCAPLDDEPQPCHKMELYVSGAELNGLKMADEPMEEGEPYSYHDEGSVKEIPITHHVKEGCEKADPAQFELLKVLGQGSFGKVFLVRKIIGPDAGQLYAMKVLKKASLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDVFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIVYRDLKPENILLDEAGHIKLTDFGLSKESVDQEKKAYSFCGTVEYMAPEVVNRRGHNQSADWWSFGVLMFEMLTGTLPFQGKDRNETMNMILKAKLGMPQFLSPEAQSLLRMLFKRNPSNRLGAGSDGVEEIKRHPFFSTVDWNKLFRREIQPPFKPASGKPEDTFCFDPEFTAKTPKDSPGVPPSANAHQLFKGFSFVATTTVEDHKISPLTNILPIVQQLHGNSAQFTDVYELKEDIGVGSYSVCKRCIHVATNMEFAVKIIDKSKRDPSEEIEILMRYGQHPNIITLKDVYDDGRFIYLVTELMKGGELLDRILRQKFFSEREASAVLFTIAKTVDYLHCQGVVHRDLKPSNILYTDDSNNADSIRICDFGFAKQLRGENGLLLTPCYTANFVAPEVLMRQGYDAACDIWSLGVLLYTMLAGYTPFANGPNDTPEEILVRIGSGKFSLSGGNWDTVSDAAKDLLSHMLHVDPHQRYTAEQVLKHSWIACRDQLPHYQLNRQDAPHLVKGAMAATYSALNHKTFQPVLEPVAASSLAQRRSMKKLTSTDL
SIO_010081: RPS6KA6
subclass of: SO_0000673
so part of: RPS6KA6
location: join(4531450..4531524,4539434..4539493,4543103..4543219,4545792..4545873,4546589..4546669,4547526..4547605,4550538..4550644,4550910..4550947,4551968..4552110,4552870..4552940,4554203..4554291,4554700..4554764,4556563..4556665,4557709..4557833,4558111..4558236,4558690..4558779,4559390..4559548,4559972..4560133,4560522..4560598,4561281..4561398,4562439..4562579,4563451..4563576)
location: region:4531450-4563576:1
so has part: feature:4531450-4531524:1:exon
so has part: feature:4539434-4539493:1:exon
so has part: feature:4543103-4543219:1:exon
so has part: feature:4545792-4545873:1:exon
so has part: feature:4546589-4546669:1:exon
so has part: feature:4547526-4547605:1:exon
so has part: feature:4550538-4550644:1:exon
so has part: feature:4550910-4550947:1:exon
so has part: feature:4551968-4552110:1:exon
so has part: feature:4552870-4552940:1:exon
so has part: feature:4554203-4554291:1:exon
so has part: feature:4554700-4554764:1:exon
so has part: feature:4556563-4556665:1:exon
so has part: feature:4557709-4557833:1:exon
so has part: feature:4558111-4558236:1:exon
so has part: feature:4558690-4558779:1:exon
so has part: feature:4559390-4559548:1:exon
so has part: feature:4559972-4560133:1:exon
so has part: feature:4560522-4560598:1:exon
so has part: feature:4561281-4561398:1:exon
so has part: feature:4562439-4562579:1:exon
so has part: feature:4563451-4563576:1:exon

XP_021399572.1
type: Protein
SIO_000068: ncbiprotein

position:4531450:1
position: 4531450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4563576:1
position: 4563576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4531450-4531524:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4539434-4539493:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4543103-4543219:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4545792-4545873:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4546589-4546669:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4547526-4547605:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4550538-4550644:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4550910-4550947:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4551968-4552110:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4552870-4552940:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4554203-4554291:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4554700-4554764:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4556563-4556665:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4557709-4557833:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4558111-4558236:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4558690-4558779:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4559390-4559548:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4559972-4560133:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4560522-4560598:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4561281-4561398:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4562439-4562579:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4563451-4563576:1:exon

RPS6KA6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: RPS6KA6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal protein S6 kinase alpha-6 isoform X2
translation: MVPCAPLDDEPQPCHKMELYVSGAELNGLKMADEPMEEGEPYSYHDEGSVKEIPITHHVKEGCEKADPAQFELLKVLGQGSFGKVFLVRKIIGPDAGQLYAMKVLKKASLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDVFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIVYRDLKPENILLDEAGHIKLTDFGLSKESVDQEKKAYSFCGTVEYMAPEVVNRRGHNQSADWWSFGVLMFEMLTGTLPFQGKDRNETMNMILKAKLGMPQFLSPEAQSLLRMLFKRNPSNRLGAGSDGVEEIKRHPFFSTVDWNKLFRREIQPPFKPASGKPEDTFCFDPEFTAKTPKDSPGVPPSANAHQLFKGFSFVATTTVEDHKISPLTNILPIVQLHGNSAQFTDVYELKEDIGVGSYSVCKRCIHVATNMEFAVKIIDKSKRDPSEEIEILMRYGQHPNIITLKDVYDDGRFIYLVTELMKGGELLDRILRQKFFSEREASAVLFTIAKTVDYLHCQGVVHRDLKPSNILYTDDSNNADSIRICDFGFAKQLRGENGLLLTPCYTANFVAPEVLMRQGYDAACDIWSLGVLLYTMLAGYTPFANGPNDTPEEILVRIGSGKFSLSGGNWDTVSDAAKDLLSHMLHVDPHQRYTAEQVLKHSWIACRDQLPHYQLNRQDAPHLVKGAMAATYSALNHKTFQPVLEPVAASSLAQRRSMKKLTSTDL
SIO_010081: RPS6KA6
subclass of: SO_0000673
so part of: RPS6KA6
location: join(4531450..4531524,4539434..4539493,4543103..4543219,4545792..4545873,4546589..4546669,4547526..4547605,4550538..4550644,4550910..4550947,4551968..4552110,4552870..4552940,4554203..4554291,4554700..4554764,4556563..4556665,4557709..4557833,4558114..4558236,4558690..4558779,4559390..4559548,4559972..4560133,4560522..4560598,4561281..4561398,4562439..4562579,4563451..4563576)
location: region:4531450-4563576:1
so has part: feature:4531450-4531524:1:exon
so has part: feature:4539434-4539493:1:exon
so has part: feature:4543103-4543219:1:exon
so has part: feature:4545792-4545873:1:exon
so has part: feature:4546589-4546669:1:exon
so has part: feature:4547526-4547605:1:exon
so has part: feature:4550538-4550644:1:exon
so has part: feature:4550910-4550947:1:exon
so has part: feature:4551968-4552110:1:exon
so has part: feature:4552870-4552940:1:exon
so has part: feature:4554203-4554291:1:exon
so has part: feature:4554700-4554764:1:exon
so has part: feature:4556563-4556665:1:exon
so has part: feature:4557709-4557833:1:exon
so has part: feature:4558114-4558236:1:exon
so has part: feature:4558690-4558779:1:exon
so has part: feature:4559390-4559548:1:exon
so has part: feature:4559972-4560133:1:exon
so has part: feature:4560522-4560598:1:exon
so has part: feature:4561281-4561398:1:exon
so has part: feature:4562439-4562579:1:exon
so has part: feature:4563451-4563576:1:exon

XP_021399573.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4531450-4531524:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4539434-4539493:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4543103-4543219:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4545792-4545873:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4546589-4546669:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4547526-4547605:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4550538-4550644:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4550910-4550947:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4551968-4552110:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4552870-4552940:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4554203-4554291:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4554700-4554764:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4556563-4556665:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4557709-4557833:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4558114-4558236:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4558690-4558779:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4559390-4559548:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4559972-4560133:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4560522-4560598:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4561281-4561398:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4562439-4562579:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4563451-4563576:1:exon

RPS6KA6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: RPS6KA6
product: ribosomal protein S6 kinase A6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021543899.2
SIO_010081: RPS6KA6
subclass of: SO_0000673
so part of: RPS6KA6
location: join(4531822..4533792,4539434..4539493,4543103..4543219,4545792..4545873,4546589..4546669,4547526..4547605,4550538..4550644,4550910..4550947,4551968..4552110,4552870..4552940,4554203..4554291,4554700..4554764,4556563..4556665,4557709..4557833,4558111..4558236,4558690..4558779,4559390..4559548,4559972..4560133,4560522..4560598,4561281..4561398,4562439..4562579,4563451..4563726)
location: region:4531822-4563726:1
so has part: feature:4531822-4533792:1:exon
so has part: feature:4539434-4539493:1:exon
so has part: feature:4543103-4543219:1:exon
so has part: feature:4545792-4545873:1:exon
so has part: feature:4546589-4546669:1:exon
so has part: feature:4547526-4547605:1:exon
so has part: feature:4550538-4550644:1:exon
so has part: feature:4550910-4550947:1:exon
so has part: feature:4551968-4552110:1:exon
so has part: feature:4552870-4552940:1:exon
so has part: feature:4554203-4554291:1:exon
so has part: feature:4554700-4554764:1:exon
so has part: feature:4556563-4556665:1:exon
so has part: feature:4557709-4557833:1:exon
so has part: feature:4558111-4558236:1:exon
so has part: feature:4558690-4558779:1:exon
so has part: feature:4559390-4559548:1:exon
so has part: feature:4559972-4560133:1:exon
so has part: feature:4560522-4560598:1:exon
so has part: feature:4561281-4561398:1:exon
so has part: feature:4562439-4562579:1:exon
so has part: feature:4563451-4563726:1:exon

position:4531822:1
position: 4531822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4531822-4533792:1:exon

position:4533792:1
position: 4533792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4539434-4539493:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4543103-4543219:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4545792-4545873:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4546589-4546669:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4547526-4547605:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4550538-4550644:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4550910-4550947:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4551968-4552110:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4552870-4552940:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4554203-4554291:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4554700-4554764:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4556563-4556665:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4557709-4557833:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4558111-4558236:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4558690-4558779:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4559390-4559548:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4559972-4560133:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4560522-4560598:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4561281-4561398:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4562439-4562579:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4563451-4563726:1:exon

RPS6KA6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: RPS6KA6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal protein S6 kinase alpha-6 isoform X3
translation: MNFWKKLLKLNGLKMADEPMEEGEPYSYHDEGSVKEIPITHHVKEGCEKADPAQFELLKVLGQGSFGKVFLVRKIIGPDAGQLYAMKVLKKASLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDVFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIVYRDLKPENILLDEAGHIKLTDFGLSKESVDQEKKAYSFCGTVEYMAPEVVNRRGHNQSADWWSFGVLMFEMLTGTLPFQGKDRNETMNMILKAKLGMPQFLSPEAQSLLRMLFKRNPSNRLGAGSDGVEEIKRHPFFSTVDWNKLFRREIQPPFKPASGKPEDTFCFDPEFTAKTPKDSPGVPPSANAHQLFKGFSFVATTTVEDHKISPLTNILPIVQQLHGNSAQFTDVYELKEDIGVGSYSVCKRCIHVATNMEFAVKIIDKSKRDPSEEIEILMRYGQHPNIITLKDVYDDGRFIYLVTELMKGGELLDRILRQKFFSEREASAVLFTIAKTVDYLHCQGVVHRDLKPSNILYTDDSNNADSIRICDFGFAKQLRGENGLLLTPCYTANFVAPEVLMRQGYDAACDIWSLGVLLYTMLAGYTPFANGPNDTPEEILVRIGSGKFSLSGGNWDTVSDAAKDLLSHMLHVDPHQRYTAEQVLKHSWIACRDQLPHYQLNRQDAPHLVKGAMAATYSALNHKTFQPVLEPVAASSLAQRRSMKKLTSTDL
SIO_010081: RPS6KA6
subclass of: SO_0000673
so part of: RPS6KA6
location: join(4533766..4533792,4539434..4539493,4543103..4543219,4545792..4545873,4546589..4546669,4547526..4547605,4550538..4550644,4550910..4550947,4551968..4552110,4552870..4552940,4554203..4554291,4554700..4554764,4556563..4556665,4557709..4557833,4558111..4558236,4558690..4558779,4559390..4559548,4559972..4560133,4560522..4560598,4561281..4561398,4562439..4562579,4563451..4563576)
location: region:4533766-4563576:1
so has part: feature:4533766-4533792:1:exon
so has part: feature:4539434-4539493:1:exon
so has part: feature:4543103-4543219:1:exon
so has part: feature:4545792-4545873:1:exon
so has part: feature:4546589-4546669:1:exon
so has part: feature:4547526-4547605:1:exon
so has part: feature:4550538-4550644:1:exon
so has part: feature:4550910-4550947:1:exon
so has part: feature:4551968-4552110:1:exon
so has part: feature:4552870-4552940:1:exon
so has part: feature:4554203-4554291:1:exon
so has part: feature:4554700-4554764:1:exon
so has part: feature:4556563-4556665:1:exon
so has part: feature:4557709-4557833:1:exon
so has part: feature:4558111-4558236:1:exon
so has part: feature:4558690-4558779:1:exon
so has part: feature:4559390-4559548:1:exon
so has part: feature:4559972-4560133:1:exon
so has part: feature:4560522-4560598:1:exon
so has part: feature:4561281-4561398:1:exon
so has part: feature:4562439-4562579:1:exon
so has part: feature:4563451-4563576:1:exon

XP_021399574.1
type: Protein
SIO_000068: ncbiprotein

position:4533766:1
position: 4533766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4533766-4533792:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4539434-4539493:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4543103-4543219:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4545792-4545873:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4546589-4546669:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4547526-4547605:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4550538-4550644:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4550910-4550947:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4551968-4552110:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4552870-4552940:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4554203-4554291:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4554700-4554764:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4556563-4556665:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4557709-4557833:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4558111-4558236:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4558690-4558779:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4559390-4559548:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4559972-4560133:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4560522-4560598:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4561281-4561398:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4562439-4562579:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4563451-4563576:1:exon

POU3F4
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: POU3F4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4605799..4607138)
location: region:4605799-4607138:-1
so has part: feature:4605799-4607138:-1:exon
subclass of: SO_0000010

110477808
type: Gene
SIO_000068: ncbigene

position:4605799:-1
position: 4605799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4607138:-1
position: 4607138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4605799-4607138:-1:exon

POU3F4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: POU3F4
product: POU class 3 homeobox 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 17 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021543905.2
SIO_010081: POU3F4
subclass of: SO_0000673
so part of: POU3F4
location: complement(4605799..4607138)
location: region:4605799-4607138:-1
so has part: feature:4605799-4607138:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4605799-4607138:-1:exon

POU3F4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: POU3F4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: POU domain, class 3, transcription factor 4
translation: MATAASNPYGLLGAGALAHAEGAGMQQGSPFRSPQKLLQSEYLQGVPGNGHPLGHHWVTSLSDGAPWPAALAGGPLEQPDVKPGREDLQLGAIIHHRSPHVSHHSPHGNHPSAWGASPAHSASLAAPPAAAAAAGQPLSVYSQGGFAVGGMLEHGGLTPPPAAAAGQGLHPGLRGEAGGEHGELGGHHCQDHSDEETPTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGSPTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQLEKEVVRVWFCNRRQKEKRMTPPGEQPQHDVYSHGVKTDTACHDL
SIO_010081: POU3F4
subclass of: SO_0000673
so part of: POU3F4
location: complement(4605994..4607106)
location: region:4605994-4607106:-1
so has part: feature:4605994-4607106:-1:exon

XP_021399580.1
type: Protein
SIO_000068: ncbiprotein

position:4605994:-1
position: 4605994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4607106:-1
position: 4607106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4605994-4607106:-1:exon

LOC110477800
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110477800
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4607694..4684427
location: region:4607694-4684427:1
so has part: feature:4607694-4684427:1:exon
subclass of: SO_0000011

110477800
type: Gene
SIO_000068: ncbigene

position:4607694:1
position: 4607694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4684427:1
position: 4684427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4607694-4684427:1:exon

LOC110477800
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110477800
product: uncharacterized LOC110477800
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_002466646.2
SIO_010081: LOC110477800
subclass of: SO_0000673
so part of: LOC110477800
location: join(4607694..4607895,4608243..4608352,4633269..4633390,4637468..4637635,4657474..4657574,4659182..4659270,4675027..4675166,4677684..4677787,4678026..4683544,4684232..4684427)
location: region:4607694-4684427:1
so has part: feature:4607694-4607895:1:exon
so has part: feature:4608243-4608352:1:exon
so has part: feature:4633269-4633390:1:exon
so has part: feature:4637468-4637635:1:exon
so has part: feature:4657474-4657574:1:exon
so has part: feature:4659182-4659270:1:exon
so has part: feature:4675027-4675166:1:exon
so has part: feature:4677684-4677787:1:exon
so has part: feature:4678026-4683544:1:exon
so has part: feature:4684232-4684427:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4607694-4607895:1:exon

position:4607895:1
position: 4607895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4608243-4608352:1:exon

position:4608243:1
position: 4608243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4608352:1
position: 4608352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4633269-4633390:1:exon

position:4633269:1
position: 4633269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4633390:1
position: 4633390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4637468-4637635:1:exon

position:4637468:1
position: 4637468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4637635:1
position: 4637635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4657474-4657574:1:exon

position:4657474:1
position: 4657474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4657574:1
position: 4657574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4659182-4659270:1:exon

position:4659182:1
position: 4659182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4659270:1
position: 4659270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4675027-4675166:1:exon

position:4675027:1
position: 4675027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4675166:1
position: 4675166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4677684-4677787:1:exon

position:4677684:1
position: 4677684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4677787:1
position: 4677787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4678026-4683544:1:exon

position:4678026:1
position: 4678026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4683544:1
position: 4683544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4684232-4684427:1:exon

position:4684232:1
position: 4684232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110477803
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110477803
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4611390..4612308
location: region:4611390-4612308:1
so has part: feature:4611390-4612308:1:exon
subclass of: SO_0000011

110477803
type: Gene
SIO_000068: ncbigene

position:4611390:1
position: 4611390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4612308:1
position: 4612308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4611390-4612308:1:exon

LOC110477803
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110477803
product: uncharacterized LOC110477803
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_002466656.1
SIO_010081: LOC110477803
subclass of: SO_0000673
so part of: LOC110477803
location: join(4611390..4611612,4612066..4612308)
location: region:4611390-4612308:1
so has part: feature:4611390-4611612:1:exon
so has part: feature:4612066-4612308:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4611390-4611612:1:exon

position:4611612:1
position: 4611612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4612066-4612308:1:exon

position:4612066:1
position: 4612066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110477801
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110477801
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4685616..4693014
location: region:4685616-4693014:1
so has part: feature:4685616-4693014:1:exon
subclass of: SO_0000011

110477801
type: Gene
SIO_000068: ncbigene

position:4685616:1
position: 4685616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4693014:1
position: 4693014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4685616-4693014:1:exon

LOC110477801
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110477801
product: uncharacterized LOC110477801, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_002466653.1
SIO_010081: LOC110477801
subclass of: SO_0000673
so part of: LOC110477801
location: join(4685616..4686468,4686574..4693014)
location: region:4685616-4693014:1
so has part: feature:4685616-4686468:1:exon
so has part: feature:4686574-4693014:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4685616-4686468:1:exon

position:4686468:1
position: 4686468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4686574-4693014:1:exon

position:4686574:1
position: 4686574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110477801
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110477801
product: uncharacterized LOC110477801, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002466654.1
SIO_010081: LOC110477801
subclass of: SO_0000673
so part of: LOC110477801
location: join(4685616..4686468,4686574..4691342,4691954..4693014)
location: region:4685616-4693014:1
so has part: feature:4685616-4686468:1:exon
so has part: feature:4686574-4691342:1:exon
so has part: feature:4691954-4693014:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4685616-4686468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4686574-4691342:1:exon

position:4691342:1
position: 4691342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4691954-4693014:1:exon

position:4691954:1
position: 4691954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110477807
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110477807
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4700516..4749152
location: region:4700516-4749152:1
so has part: feature:4700516-4749152:1:exon
subclass of: SO_0000011

110477807
type: Gene
SIO_000068: ncbigene

position:4700516:1
position: 4700516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4749152:1
position: 4749152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4700516-4749152:1:exon

LOC110477807
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110477807
product: uncharacterized LOC110477807
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002466657.2
SIO_010081: LOC110477807
subclass of: SO_0000673
so part of: LOC110477807
location: join(4700516..4700641,4734564..4734761,4749115..4749152)
location: region:4700516-4749152:1
so has part: feature:4700516-4700641:1:exon
so has part: feature:4734564-4734761:1:exon
so has part: feature:4749115-4749152:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4700516-4700641:1:exon

position:4700641:1
position: 4700641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4734564-4734761:1:exon

position:4734564:1
position: 4734564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4734761:1
position: 4734761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4749115-4749152:1:exon

position:4749115:1
position: 4749115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116183645
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC116183645
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4778223..4835561
location: region:4778223-4835561:1
so has part: feature:4778223-4835561:1:exon
subclass of: SO_0000011

116183645
type: Gene
SIO_000068: ncbigene

position:4778223:1
position: 4778223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4835561:1
position: 4835561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4778223-4835561:1:exon

LOC116183645
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC116183645
product: uncharacterized LOC116183645
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004148305.1
SIO_010081: LOC116183645
subclass of: SO_0000673
so part of: LOC116183645
location: join(4778223..4778392,4829601..4829636,4835058..4835333,4835421..4835561)
location: region:4778223-4835561:1
so has part: feature:4778223-4778392:1:exon
so has part: feature:4829601-4829636:1:exon
so has part: feature:4835058-4835333:1:exon
so has part: feature:4835421-4835561:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4778223-4778392:1:exon

position:4778392:1
position: 4778392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4829601-4829636:1:exon

position:4829601:1
position: 4829601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4829636:1
position: 4829636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4835058-4835333:1:exon

position:4835058:1
position: 4835058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4835333:1
position: 4835333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4835421-4835561:1:exon

position:4835421:1
position: 4835421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110477799
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110477799
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4834847..4861305)
location: region:4834847-4861305:-1
so has part: feature:4834847-4861305:-1:exon
subclass of: SO_0000010

110477799
type: Gene
SIO_000068: ncbigene

position:4834847:-1
position: 4834847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4861305:-1
position: 4861305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4834847-4861305:-1:exon

LOC110477799
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110477799
product: transmembrane protein 182, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031504777.1
SIO_010081: LOC110477799
subclass of: SO_0000673
so part of: LOC110477799
location: complement(join(4834847..4835278,4842102..4842239,4844734..4844832,4846634..4846751,4849329..4849429,4861177..4861305))
location: region:4834847-4861305:-1
so has part: feature:4861177-4861305:-1:exon
so has part: feature:4849329-4849429:-1:exon
so has part: feature:4846634-4846751:-1:exon
so has part: feature:4844734-4844832:-1:exon
so has part: feature:4842102-4842239:-1:exon
so has part: feature:4834847-4835278:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4861177-4861305:-1:exon

position:4861177:-1
position: 4861177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4849329-4849429:-1:exon

position:4849329:-1
position: 4849329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4849429:-1
position: 4849429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4846634-4846751:-1:exon

position:4846634:-1
position: 4846634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4846751:-1
position: 4846751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4844734-4844832:-1:exon

position:4844734:-1
position: 4844734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4844832:-1
position: 4844832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4842102-4842239:-1:exon

position:4842102:-1
position: 4842102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4842239:-1
position: 4842239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4834847-4835278:-1:exon

position:4835278:-1
position: 4835278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110477799
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110477799
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 182 isoform X1
translation: MKAGAAALAAGILGGTGVLLFLIAFGTDYWLLATDTCGGFEHGNSTLSTGGAETPTEVGKEILTFHHEGFFWRCWFFGEGHPETIWTFWYTSQAHPKFCMHGYLFPMPIAVGPFPHPSYDTTAVYRGFWTAFILLAVAAGLVGGLLLVCGVPFSSPHSYKVGGGFLLLSGGLFLLLVFLFVMWKEFAADFQKYILLERSERCLDDVPVHVYYGWSFMFAAAGVPLVLLSGLLFFLVGRDIMDSLQ
SIO_010081: LOC110477799
subclass of: SO_0000673
so part of: LOC110477799
location: complement(join(4835049..4835278,4842102..4842239,4844734..4844832,4846634..4846751,4849329..4849429,4861177..4861228))
location: region:4835049-4861228:-1
so has part: feature:4861177-4861228:-1:exon
so has part: feature:4849329-4849429:-1:exon
so has part: feature:4846634-4846751:-1:exon
so has part: feature:4844734-4844832:-1:exon
so has part: feature:4842102-4842239:-1:exon
so has part: feature:4835049-4835278:-1:exon

XP_031360637.1
type: Protein
SIO_000068: ncbiprotein

position:4835049:-1
position: 4835049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4861228:-1
position: 4861228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4861177-4861228:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4849329-4849429:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4846634-4846751:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4844734-4844832:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4842102-4842239:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4835049-4835278:-1:exon

LOC110477799
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110477799
product: transmembrane protein 182, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021537711.2
SIO_010081: LOC110477799
subclass of: SO_0000673
so part of: LOC110477799
location: complement(join(4853528..4853979,4856481..4856579,4858381..4858498,4861076..4861305))
location: region:4853528-4861305:-1
so has part: feature:4861076-4861305:-1:exon
so has part: feature:4858381-4858498:-1:exon
so has part: feature:4856481-4856579:-1:exon
so has part: feature:4853528-4853979:-1:exon

position:4853528:-1
position: 4853528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4861076-4861305:-1:exon

position:4861076:-1
position: 4861076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4858381-4858498:-1:exon

position:4858381:-1
position: 4858381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4858498:-1
position: 4858498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4856481-4856579:-1:exon

position:4856481:-1
position: 4856481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4856579:-1
position: 4856579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4853528-4853979:-1:exon

position:4853979:-1
position: 4853979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110477799
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110477799
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 182 isoform X2
translation: MKAGAAALAAGILGGTGVLLFLIAFGTDYWLLATDTCGGFEHGNSTLSTGGAETPTEVGKEILTFHHEGFFWRCWFFGEGHPETIWTFWYTSQAHPKFCMHGYLFPMPIAVGPFPHPSYDTTAVYRGFWTAFILLAVAAGLVGGLLLVCGVPFSSPHSYKVGGGFLLLSGEGTRLGQGGFGTGAGGDEVLPWEMGL
SIO_010081: LOC110477799
subclass of: SO_0000673
so part of: LOC110477799
location: complement(join(4853759..4853979,4856481..4856579,4858381..4858498,4861076..4861228))
location: region:4853759-4861228:-1
so has part: feature:4861076-4861228:-1:exon
so has part: feature:4858381-4858498:-1:exon
so has part: feature:4856481-4856579:-1:exon
so has part: feature:4853759-4853979:-1:exon

XP_021393386.1
type: Protein
SIO_000068: ncbiprotein

position:4853759:-1
position: 4853759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4861076-4861228:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4858381-4858498:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4856481-4856579:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4853759-4853979:-1:exon

LOC110474361
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110474361
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4868641..4893419)
location: region:4868641-4893419:-1
so has part: feature:4868641-4893419:-1:exon
subclass of: SO_0000010

110474361
type: Gene
SIO_000068: ncbigene

position:4868641:-1
position: 4868641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4893419:-1
position: 4893419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4868641-4893419:-1:exon

LOC110474361
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110474361
product: sodium/hydrogen exchanger 2-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 5% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021537732.1
SIO_010081: LOC110474361
subclass of: SO_0000673
so part of: LOC110474361
location: complement(join(4868641..4868804,4869695..4869767,4874634..4874768,4875984..4876098,4876540..4876687,4877735..4877805,4879947..4880036,4883183..4883379,4886911..4887128,4890354..4890604,4891331..4891794,4893164..4893419))
location: region:4868641-4893419:-1
so has part: feature:4893164-4893419:-1:exon
so has part: feature:4891331-4891794:-1:exon
so has part: feature:4890354-4890604:-1:exon
so has part: feature:4886911-4887128:-1:exon
so has part: feature:4883183-4883379:-1:exon
so has part: feature:4879947-4880036:-1:exon
so has part: feature:4877735-4877805:-1:exon
so has part: feature:4876540-4876687:-1:exon
so has part: feature:4875984-4876098:-1:exon
so has part: feature:4874634-4874768:-1:exon
so has part: feature:4869695-4869767:-1:exon
so has part: feature:4868641-4868804:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4893164-4893419:-1:exon

position:4893164:-1
position: 4893164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4891331-4891794:-1:exon

position:4891331:-1
position: 4891331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4891794:-1
position: 4891794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4890354-4890604:-1:exon

position:4890354:-1
position: 4890354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4890604:-1
position: 4890604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4886911-4887128:-1:exon

position:4886911:-1
position: 4886911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4887128:-1
position: 4887128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4883183-4883379:-1:exon

position:4883183:-1
position: 4883183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4883379:-1
position: 4883379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4879947-4880036:-1:exon

position:4879947:-1
position: 4879947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4880036:-1
position: 4880036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4877735-4877805:-1:exon

position:4877735:-1
position: 4877735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4877805:-1
position: 4877805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4876540-4876687:-1:exon

position:4876540:-1
position: 4876540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4876687:-1
position: 4876687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4875984-4876098:-1:exon

position:4875984:-1
position: 4875984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4876098:-1
position: 4876098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4874634-4874768:-1:exon

position:4874634:-1
position: 4874634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4874768:-1
position: 4874768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4869695-4869767:-1:exon

position:4869695:-1
position: 4869695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4869767:-1
position: 4869767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4868641-4868804:-1:exon

position:4868804:-1
position: 4868804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110474361
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110474361
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: sodium/hydrogen exchanger 2-like
translation: MENHGHGAAAVLAGSWLSCILRAPRVGALQEPLLEDAVLENISWAAEEAPGNDSSEHAFFSLDYQHVQVPFEITLWIMLASLAKIGFHLYNKLPSVVPESCLLIFVGLIMGGIIYGLNDRSPPVMDSDIFFLYLLPPIVLDAGYFMPSRPFFENIGTILLYAVVGTIWNVFGIGFSLYGICQVKAFRLQDVSLLHNLLFGSLIAAVDPVAVLAVFEEIHVNEKLHILVFGESLLNDAVTVVLYKLFRSFCEMPTIKSVDVFAGVGKFFVVGLGGVLVGLSFGFTAAFTTRFTKDIRVIEPLFVFLYSYLSYLTAEMFHLSGIVAIISCAMGMKRYVEANISLKSHTTVKYFMKMWSSVSDTLIFIFLGVSTIGENHEWNWPYICFTVIFCLVWRALGVLVLTFFVNRFHVNTITSKDQFIIAYGGLRGAICFSLVFLLPDFHRKKLFIAATTVVILFTVFVQGMTIRPLVDLLAVKRKRESAPTVGEQIHIRFLDHLLAGIEDISGHWGQYYWKDKLEYFNSKYLQKILLREYDQPKSSIVLLYEKLERKHAIELAQAGQLXATACSSDRTVITDQKLEDTPNPDVLDNMQEILARNLYRIRRTGPAYNRHTLPGDSEPTERAKELLILRHKNLLVEMGGSDSCSSRKESQKEDSCSAQGEAVPQARLCRSFTVGNTEKVREVKENRSKSVCAIPPPQPSGQTWAWRKELSLEMYKHKGCSGSPGGV
SIO_010081: LOC110474361
subclass of: SO_0000673
so part of: LOC110474361
location: complement(join(4868641..4868804,4869695..4869767,4874634..4874768,4875984..4876098,4876540..4876687,4877735..4877805,4879947..4880036,4883183..4883379,4886911..4887128,4890354..4890604,4891331..4891794,4893164..4893419))
location: region:4868641-4893419:-1
so has part: feature:4893164-4893419:-1:exon
so has part: feature:4891331-4891794:-1:exon
so has part: feature:4890354-4890604:-1:exon
so has part: feature:4886911-4887128:-1:exon
so has part: feature:4883183-4883379:-1:exon
so has part: feature:4879947-4880036:-1:exon
so has part: feature:4877735-4877805:-1:exon
so has part: feature:4876540-4876687:-1:exon
so has part: feature:4875984-4876098:-1:exon
so has part: feature:4874634-4874768:-1:exon
so has part: feature:4869695-4869767:-1:exon
so has part: feature:4868641-4868804:-1:exon

XP_021393407.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4893164-4893419:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4891331-4891794:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4890354-4890604:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4886911-4887128:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4883183-4883379:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4879947-4880036:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4877735-4877805:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4876540-4876687:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4875984-4876098:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4874634-4874768:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4869695-4869767:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4868641-4868804:-1:exon

LOC110474376
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110474376
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4901319..4902242)
location: region:4901319-4902242:-1
so has part: feature:4901319-4902242:-1:exon
subclass of: SO_0000010

110474376
type: Gene
SIO_000068: ncbigene

position:4901319:-1
position: 4901319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4902242:-1
position: 4902242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4901319-4902242:-1:exon

LOC110474376
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: LOC110474376
product: protein CXorf21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 17% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021537744.1
SIO_010081: LOC110474376
subclass of: SO_0000673
so part of: LOC110474376
location: complement(4901319..4902242)
location: region:4901319-4902242:-1
so has part: feature:4901319-4902242:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4901319-4902242:-1:exon

LOC110474376
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: LOC110474376
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CXorf21
translation: MLAEGILTRLIYKESCHQDKPCKSPASQKAKEGIWRQKLVDIPEIKGFADGCEKREELSARSSKVEAGSSSRWGSMEKEPAKDQEMLVKGTASPALHIPRRGGSLDQVDLYRSWPCNSIYQDYPDLQIGGDRVGGHTCDSGCVLDHVCDELPDGPVLLSIDIPLGQSPQCEHPKKPSGMSLPGDEAGERSLVLSEEPLSNSTLNKYMEAKVAELYKQFFDESLARCGSITNLLTCSWIRNSLDQISVQISQEQNIETSKARGALLHSLALFSSRNAPNRSSSEFSTPNLQISNTMGAKWSCRMEFTS
SIO_010081: LOC110474376
subclass of: SO_0000673
so part of: LOC110474376
location: complement(4901319..4902242)
location: region:4901319-4902242:-1
so has part: feature:4901319-4902242:-1:exon

XP_021393419.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4901319-4902242:-1:exon

SH3BGRL
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: SH3BGRL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4907920..4937820)
location: region:4907920-4937820:-1
so has part: feature:4907920-4937820:-1:exon
subclass of: SO_0000010

110474362
type: Gene
SIO_000068: ncbigene

position:4907920:-1
position: 4907920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4937820:-1
position: 4937820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4907920-4937820:-1:exon

SH3BGRL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: SH3BGRL
product: SH3 domain binding glutamate rich protein like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031504778.1
SIO_010081: SH3BGRL
subclass of: SO_0000673
so part of: SH3BGRL
location: complement(join(4907920..4909995,4912852..4912961,4915832..4915970,4937696..4937820))
location: region:4907920-4937820:-1
so has part: feature:4937696-4937820:-1:exon
so has part: feature:4915832-4915970:-1:exon
so has part: feature:4912852-4912961:-1:exon
so has part: feature:4907920-4909995:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4937696-4937820:-1:exon

position:4937696:-1
position: 4937696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4915832-4915970:-1:exon

position:4915832:-1
position: 4915832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4915970:-1
position: 4915970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4912852-4912961:-1:exon

position:4912852:-1
position: 4912852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4912961:-1
position: 4912961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4907920-4909995:-1:exon

position:4909995:-1
position: 4909995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SH3BGRL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: SH3BGRL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3 domain-binding glutamic acid-rich-like protein
translation: MVIKVYIASSSGSTAIKKQQQDVLGFLEANKIEFEEKDIAANEENRKWMRENVPEDSRPAXXFPIPPAMAKDYDAFFEARENNAVYAFLGLTAPPGSKEAEALAKQQA
SIO_010081: SH3BGRL
subclass of: SO_0000673
so part of: SH3BGRL
location: complement(join(4909963..4909995,4912852..4912961,4915832..4915970,4937696..4937740))
location: region:4909963-4937740:-1
so has part: feature:4937696-4937740:-1:exon
so has part: feature:4915832-4915970:-1:exon
so has part: feature:4912852-4912961:-1:exon
so has part: feature:4909963-4909995:-1:exon

XP_031360638.1
type: Protein
SIO_000068: ncbiprotein

position:4909963:-1
position: 4909963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4937740:-1
position: 4937740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4937696-4937740:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4915832-4915970:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4912852-4912961:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4909963-4909995:-1:exon

HMGN5
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: HMGN5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4947156..4955261
location: region:4947156-4955261:1
so has part: feature:4947156-4955261:1:exon
subclass of: SO_0000010

110474377
type: Gene
SIO_000068: ncbigene

position:4947156:1
position: 4947156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4955261:1
position: 4955261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4947156-4955261:1:exon

HMGN5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: HMGN5
product: high mobility group nucleosome binding domain 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 ESTs, 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021537746.2
SIO_010081: HMGN5
subclass of: SO_0000673
so part of: HMGN5
location: join(4947156..4947182,4948862..4948936,4949544..4949573,4950026..4950076,4953211..4953354,4954560..4955261)
location: region:4947156-4955261:1
so has part: feature:4947156-4947182:1:exon
so has part: feature:4948862-4948936:1:exon
so has part: feature:4949544-4949573:1:exon
so has part: feature:4950026-4950076:1:exon
so has part: feature:4953211-4953354:1:exon
so has part: feature:4954560-4955261:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4947156-4947182:1:exon

position:4947182:1
position: 4947182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4948862-4948936:1:exon

position:4948862:1
position: 4948862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4948936:1
position: 4948936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4949544-4949573:1:exon

position:4949544:1
position: 4949544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4949573:1
position: 4949573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4950026-4950076:1:exon

position:4950026:1
position: 4950026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4950076:1
position: 4950076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4953211-4953354:1:exon

position:4953211:1
position: 4953211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4953354:1
position: 4953354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4954560-4955261:1:exon

position:4954560:1
position: 4954560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HMGN5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: HMGN5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: high mobility group nucleosome-binding domain-containing protein 5
translation: MLWSRGLREGVVLLSHLSVSLFLQAPAEGEAKEEPKRRSARLSAKPAPPKPEPKPKKAAPKKEKAANDKKEDKKAATKGKKGAKGKEETKQEDAKEENHSENGDTKTNEAPAAEASDDKEAKSE
SIO_010081: HMGN5
subclass of: SO_0000673
so part of: HMGN5
location: join(4947156..4947182,4948862..4948936,4949544..4949573,4950026..4950076,4953211..4953354,4954560..4954607)
location: region:4947156-4954607:1
so has part: feature:4947156-4947182:1:exon
so has part: feature:4948862-4948936:1:exon
so has part: feature:4949544-4949573:1:exon
so has part: feature:4950026-4950076:1:exon
so has part: feature:4953211-4953354:1:exon
so has part: feature:4954560-4954607:1:exon

XP_021393421.1
type: Protein
SIO_000068: ncbiprotein

position:4954607:1
position: 4954607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4947156-4947182:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4948862-4948936:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4949544-4949573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4950026-4950076:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4953211-4953354:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4954560-4954607:1:exon

LOC110474364
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: LOC110474364
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4959789..4975140)
location: region:4959789-4975140:-1
so has part: feature:4959789-4975140:-1:exon
subclass of: SO_0000011

110474364
type: Gene
SIO_000068: ncbigene

position:4959789:-1
position: 4959789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4975140:-1
position: 4975140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4959789-4975140:-1:exon

LOC110474364
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 299123
nc RNA class: lncRNA
gene: LOC110474364
product: uncharacterized LOC110474364
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002466064.2
SIO_010081: LOC110474364
subclass of: SO_0000673
so part of: LOC110474364
location: complement(join(4959789..4960200,4963466..4963568,4964967..4965007,4968950..4969063,4969345..4969554,4974784..4974857,4974996..4975140))
location: region:4959789-4975140:-1
so has part: feature:4974996-4975140:-1:exon
so has part: feature:4974784-4974857:-1:exon
so has part: feature:4969345-4969554:-1:exon
so has part: feature:4968950-4969063:-1:exon
so has part: feature:4964967-4965007:-1:exon
so has part: feature:4963466-4963568:-1:exon
so has part: feature:4959789-4960200:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4974996-4975140:-1:exon

position:4974996:-1
position: 4974996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4974784-4974857:-1:exon

position:4974784:-1
position: 4974784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4974857:-1
position: 4974857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4969345-4969554:-1:exon

position:4969345:-1
position: 4969345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4969554:-1
position: 4969554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4968950-4969063:-1:exon

position:4968950:-1
position: 4968950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4969063:-1
position: 4969063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4964967-4965007:-1:exon

position:4964967:-1
position: 4964967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4965007:-1
position: 4965007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4963466-4963568:-1:exon

position:4963466:-1
position: 4963466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4963568:-1
position: 4963568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4959789-4960200:-1:exon

position:4960200:-1
position: 4960200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BRWD3
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: BRWD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4974568..5021519
location: region:4974568-5021519:1
so has part: feature:4974568-5021519:1:exon
subclass of: SO_0000010

110474363
type: Gene
SIO_000068: ncbigene

position:4974568:1
position: 4974568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5021519:1
position: 5021519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4974568-5021519:1:exon

BRWD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: BRWD3
product: bromodomain and WD repeat domain containing 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021537734.1
SIO_010081: BRWD3
subclass of: SO_0000673
so part of: BRWD3
location: join(4974568..4974732,4974818..4974876,4975041..4975070,4975321..4975380,4983060..4983210,4985273..4985371,4991452..4991612,4992573..4992794,4994140..4994240,4994881..4994951,4995796..4995896,4997052..4997092,4998525..4998629,4999567..4999720,5000229..5000363,5000739..5000867,5001267..5001492,5002131..5002301,5004472..5004655,5005092..5005185,5005787..5005936,5007395..5007471,5008089..5008266,5009020..5009136,5009602..5009709,5010737..5010861,5011066..5011148,5011553..5011664,5012065..5012126,5012212..5012367,5013072..5013192,5013700..5013825,5013909..5013990,5014527..5014583,5014919..5015059,5015278..5015430,5016236..5016399,5016884..5016981,5017437..5017595,5018760..5021519)
location: region:4974568-5021519:1
so has part: feature:4974568-4974732:1:exon
so has part: feature:4974818-4974876:1:exon
so has part: feature:4975041-4975070:1:exon
so has part: feature:4975321-4975380:1:exon
so has part: feature:4983060-4983210:1:exon
so has part: feature:4985273-4985371:1:exon
so has part: feature:4991452-4991612:1:exon
so has part: feature:4992573-4992794:1:exon
so has part: feature:4994140-4994240:1:exon
so has part: feature:4994881-4994951:1:exon
so has part: feature:4995796-4995896:1:exon
so has part: feature:4997052-4997092:1:exon
so has part: feature:4998525-4998629:1:exon
so has part: feature:4999567-4999720:1:exon
so has part: feature:5000229-5000363:1:exon
so has part: feature:5000739-5000867:1:exon
so has part: feature:5001267-5001492:1:exon
so has part: feature:5002131-5002301:1:exon
so has part: feature:5004472-5004655:1:exon
so has part: feature:5005092-5005185:1:exon
so has part: feature:5005787-5005936:1:exon
so has part: feature:5007395-5007471:1:exon
so has part: feature:5008089-5008266:1:exon
so has part: feature:5009020-5009136:1:exon
so has part: feature:5009602-5009709:1:exon
so has part: feature:5010737-5010861:1:exon
so has part: feature:5011066-5011148:1:exon
so has part: feature:5011553-5011664:1:exon
so has part: feature:5012065-5012126:1:exon
so has part: feature:5012212-5012367:1:exon
so has part: feature:5013072-5013192:1:exon
so has part: feature:5013700-5013825:1:exon
so has part: feature:5013909-5013990:1:exon
so has part: feature:5014527-5014583:1:exon
so has part: feature:5014919-5015059:1:exon
so has part: feature:5015278-5015430:1:exon
so has part: feature:5016236-5016399:1:exon
so has part: feature:5016884-5016981:1:exon
so has part: feature:5017437-5017595:1:exon
so has part: feature:5018760-5021519:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4974568-4974732:1:exon

position:4974732:1
position: 4974732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4974818-4974876:1:exon

position:4974818:1
position: 4974818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4974876:1
position: 4974876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4975041-4975070:1:exon

position:4975041:1
position: 4975041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4975070:1
position: 4975070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4975321-4975380:1:exon

position:4975321:1
position: 4975321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4975380:1
position: 4975380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4983060-4983210:1:exon

position:4983060:1
position: 4983060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4983210:1
position: 4983210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4985273-4985371:1:exon

position:4985273:1
position: 4985273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4985371:1
position: 4985371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4991452-4991612:1:exon

position:4991452:1
position: 4991452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4991612:1
position: 4991612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4992573-4992794:1:exon

position:4992573:1
position: 4992573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4992794:1
position: 4992794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4994140-4994240:1:exon

position:4994140:1
position: 4994140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4994240:1
position: 4994240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4994881-4994951:1:exon

position:4994881:1
position: 4994881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4994951:1
position: 4994951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4995796-4995896:1:exon

position:4995796:1
position: 4995796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4995896:1
position: 4995896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4997052-4997092:1:exon

position:4997052:1
position: 4997052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4997092:1
position: 4997092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4998525-4998629:1:exon

position:4998525:1
position: 4998525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4998629:1
position: 4998629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4999567-4999720:1:exon

position:4999567:1
position: 4999567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4999720:1
position: 4999720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5000229-5000363:1:exon

position:5000229:1
position: 5000229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5000363:1
position: 5000363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5000739-5000867:1:exon

position:5000739:1
position: 5000739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5000867:1
position: 5000867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5001267-5001492:1:exon

position:5001267:1
position: 5001267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5001492:1
position: 5001492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5002131-5002301:1:exon

position:5002131:1
position: 5002131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5002301:1
position: 5002301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5004472-5004655:1:exon

position:5004472:1
position: 5004472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5004655:1
position: 5004655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5005092-5005185:1:exon

position:5005092:1
position: 5005092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5005185:1
position: 5005185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:5005787-5005936:1:exon

position:5005787:1
position: 5005787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5005936:1
position: 5005936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:5007395-5007471:1:exon

position:5007395:1
position: 5007395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5007471:1
position: 5007471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:5008089-5008266:1:exon

position:5008089:1
position: 5008089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5008266:1
position: 5008266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:5009020-5009136:1:exon

position:5009020:1
position: 5009020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5009136:1
position: 5009136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:5009602-5009709:1:exon

position:5009602:1
position: 5009602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5009709:1
position: 5009709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:5010737-5010861:1:exon

position:5010737:1
position: 5010737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5010861:1
position: 5010861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:5011066-5011148:1:exon

position:5011066:1
position: 5011066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5011148:1
position: 5011148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:5011553-5011664:1:exon

position:5011553:1
position: 5011553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5011664:1
position: 5011664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:5012065-5012126:1:exon

position:5012065:1
position: 5012065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5012126:1
position: 5012126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:5012212-5012367:1:exon

position:5012212:1
position: 5012212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5012367:1
position: 5012367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:5013072-5013192:1:exon

position:5013072:1
position: 5013072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5013192:1
position: 5013192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:5013700-5013825:1:exon

position:5013700:1
position: 5013700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5013825:1
position: 5013825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:5013909-5013990:1:exon

position:5013909:1
position: 5013909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5013990:1
position: 5013990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:5014527-5014583:1:exon

position:5014527:1
position: 5014527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5014583:1
position: 5014583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:5014919-5015059:1:exon

position:5014919:1
position: 5014919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5015059:1
position: 5015059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:5015278-5015430:1:exon

position:5015278:1
position: 5015278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5015430:1
position: 5015430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:5016236-5016399:1:exon

position:5016236:1
position: 5016236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5016399:1
position: 5016399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:5016884-5016981:1:exon

position:5016884:1
position: 5016884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5016981:1
position: 5016981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:5017437-5017595:1:exon

position:5017437:1
position: 5017437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5017595:1
position: 5017595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:5018760-5021519:1:exon

position:5018760:1
position: 5018760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BRWD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: BRWD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain and WD repeat-containing protein 3
translation: MAAAAAPTQLEAELYYLIARFLQSGPCKKSAQVLVEELEEHQLIPRRLDWQGKEHRRSFEDLVAVNAHIPPDYLLRICERLGPLLDKEIPQSVLGVQTLLGVGRQSLLRAAKDFRHTLWKGSAFAALHRGRPPELPVNYGKPPNVVHILSARQLTGCGRFSHLFPTSTYQHMKMHKRILGHLSSVYCIAFDRSGRRIFTGSDDCLVKIWATDDGRLLSTLRGHSAEISDMAVNYENTLLAAGSCDKVVRVWCLRTCAPLAVLQGHSASITSIQFSPARKGTTRYLTSTGADGTICFWQWHANTMKFKDRPVKFAERSRPGVQISCSSFSSGGMFIATGSTDHVIRIYYLGSESPEKMAELESHTDKVVAVQFCNNGDSLRFVSGSRDGTARIWHYHQHDWKSLVLDMATKMTGNNVASGEDKVTKLKVTMVAWDRYDATVITAVNNFLLKVWNSSTGQLLHSLSGHDDEVFVLEAHPFDQRIVLSAGHDGNIFVWDIDKGTKIRNYFNMIEGQGHGAVFDCKFSPDGQHFACTDSHGHLLLFGFGCNKYYEKIPDQMFFHTDYRPLIRDANNYVLDEQTQQAPHLMPPPFLVDVDGNPHPTRFQRLVPGRENCKDEQLIPQLGYVANGDGEVVEQVIGQQTNDQDESILDGMIRELQREQDLRLINEGETPPNPPLNRSHSVNGALRSPGLDVASPPNVGLRRSGQIEGVRQMHHNAPRSQMATERDLMAWSRRVVVNELPPGISKVQEECRAAKGEIEISLYTADKKRKPSHTLQRSEFQAGGGRALRRNQRKRQHAYQTRSTIEHSQQGASQNPCARHDSDSSSEEDETVGTSDASMDDPVAAWQSESSSSDSSSEYSDWTADAGINLQPPKRQTRQAARKICSSSEDENMKGTKGLEPKRRKLKQPRKKKASGLLALEGEPSEEWLAPQWILDTIPRRSPFVPQMGDEIIYFRQGHEAYVRAVRKAKIYSINMQKQPWNKMELREQEFVKTVGIKYEVGPPTLCCLKLAFLDPITGKMTGESFSIKYHDMPDVIDFLVLHQFYNEAKERNWQIGDRFRSIIDDAWWFGTVESQQPFQAEYPDSSFQCYSVHWDNNERERMSPWDMEPIPEGTAYPEEVGAGVPVTPEELTALLYKPQEGEWGAHSRDEECERVIRGIEQLLSLDISNPFAVPVDLSAYPMYCTVVAYPTDLTTIRRRLENRFYRRISALMWEVRYIEHNARTFNEPDSPIVKAAKIVTDVLLRFIGDQSCTDILEIYNKVKAEDLSSTDEEEEVAEVDVDSDAPGTSSGKRRVRRRVKRQPMKASADAWKEQCQQLLNLIYEREDSEPFRQPVDLFSYPDYRDIVDTPMDFSTVKETLEAGNYTSPLEFYKDIRLIFCNSKAYTPNKKSRIYSMTLRLSALFENHMKNIISEYKSAMQCQKRKRPRYRKRLRSSSSSPSTSRASSPKGKQKQVKIQPKPNQNTSLPLTRTNSSVSSHVSDTAEEPLGSATGEELEGQPSSSGSNAQSRSGNAIDPGKSRPVRSKSTPVKQDHSPDGPLTNGDGREPRAGVKRKLLSASEEDEHLEEAEEEEEEEKKKRELKEKSGLSSSESGESGSSSSSESRSGSDSDSESTSRTDQDYIDGDHDYSKVVQSKKPKRKIKRKLTGGKRNWQGRGTGRRGRWGRWGRWSRGGRGGRGGRGCGRGRGGGRGGRRGRGGRGASRGATRAKRARLADDEFENLFGGQFGENVFGGRFSRPPRIKTRNEGRRTVLYNDDSDNDNFVHTEDPLNLGTSRSGRVRKMTEKARVSHLMGWNY
SIO_010081: BRWD3
subclass of: SO_0000673
so part of: BRWD3
location: join(4974696..4974732,4974818..4974876,4975041..4975070,4975321..4975380,4983060..4983210,4985273..4985371,4991452..4991612,4992573..4992794,4994140..4994240,4994881..4994951,4995796..4995896,4997052..4997092,4998525..4998629,4999567..4999720,5000229..5000363,5000739..5000867,5001267..5001492,5002131..5002301,5004472..5004655,5005092..5005185,5005787..5005936,5007395..5007471,5008089..5008266,5009020..5009136,5009602..5009709,5010737..5010861,5011066..5011148,5011553..5011664,5012065..5012126,5012212..5012367,5013072..5013192,5013700..5013825,5013909..5013990,5014527..5014583,5014919..5015059,5015278..5015430,5016236..5016399,5016884..5016981,5017437..5017595,5018760..5019556)
location: region:4974696-5019556:1
so has part: feature:4974696-4974732:1:exon
so has part: feature:4974818-4974876:1:exon
so has part: feature:4975041-4975070:1:exon
so has part: feature:4975321-4975380:1:exon
so has part: feature:4983060-4983210:1:exon
so has part: feature:4985273-4985371:1:exon
so has part: feature:4991452-4991612:1:exon
so has part: feature:4992573-4992794:1:exon
so has part: feature:4994140-4994240:1:exon
so has part: feature:4994881-4994951:1:exon
so has part: feature:4995796-4995896:1:exon
so has part: feature:4997052-4997092:1:exon
so has part: feature:4998525-4998629:1:exon
so has part: feature:4999567-4999720:1:exon
so has part: feature:5000229-5000363:1:exon
so has part: feature:5000739-5000867:1:exon
so has part: feature:5001267-5001492:1:exon
so has part: feature:5002131-5002301:1:exon
so has part: feature:5004472-5004655:1:exon
so has part: feature:5005092-5005185:1:exon
so has part: feature:5005787-5005936:1:exon
so has part: feature:5007395-5007471:1:exon
so has part: feature:5008089-5008266:1:exon
so has part: feature:5009020-5009136:1:exon
so has part: feature:5009602-5009709:1:exon
so has part: feature:5010737-5010861:1:exon
so has part: feature:5011066-5011148:1:exon
so has part: feature:5011553-5011664:1:exon
so has part: feature:5012065-5012126:1:exon
so has part: feature:5012212-5012367:1:exon
so has part: feature:5013072-5013192:1:exon
so has part: feature:5013700-5013825:1:exon
so has part: feature:5013909-5013990:1:exon
so has part: feature:5014527-5014583:1:exon
so has part: feature:5014919-5015059:1:exon
so has part: feature:5015278-5015430:1:exon
so has part: feature:5016236-5016399:1:exon
so has part: feature:5016884-5016981:1:exon
so has part: feature:5017437-5017595:1:exon
so has part: feature:5018760-5019556:1:exon

XP_021393409.1
type: Protein
SIO_000068: ncbiprotein

position:4974696:1
position: 4974696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5019556:1
position: 5019556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4974696-4974732:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4974818-4974876:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4975041-4975070:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4975321-4975380:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4983060-4983210:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4985273-4985371:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4991452-4991612:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4992573-4992794:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4994140-4994240:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4994881-4994951:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4995796-4995896:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4997052-4997092:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4998525-4998629:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4999567-4999720:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5000229-5000363:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5000739-5000867:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5001267-5001492:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5002131-5002301:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5004472-5004655:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5005092-5005185:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5005787-5005936:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5007395-5007471:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5008089-5008266:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5009020-5009136:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5009602-5009709:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5010737-5010861:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:5011066-5011148:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:5011553-5011664:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:5012065-5012126:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:5012212-5012367:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:5013072-5013192:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:5013700-5013825:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:5013909-5013990:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:5014527-5014583:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:5014919-5015059:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:5015278-5015430:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:5016236-5016399:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:5016884-5016981:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:5017437-5017595:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:5018760-5019556:1:exon

TENT5D
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TENT5D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5059190..5073368)
location: region:5059190-5073368:-1
so has part: feature:5059190-5073368:-1:exon
subclass of: SO_0000010

110474349
type: Gene
SIO_000068: ncbigene

position:5059190:-1
position: 5059190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5073368:-1
position: 5073368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5059190-5073368:-1:exon

TENT5D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TENT5D
product: terminal nucleotidyltransferase 5D, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021537714.2
SIO_010081: TENT5D
subclass of: SO_0000673
so part of: TENT5D
location: complement(join(5059190..5060466,5066582..5066703,5073221..5073368))
location: region:5059190-5073368:-1
so has part: feature:5073221-5073368:-1:exon
so has part: feature:5066582-5066703:-1:exon
so has part: feature:5059190-5060466:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5073221-5073368:-1:exon

position:5073221:-1
position: 5073221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5066582-5066703:-1:exon

position:5066582:-1
position: 5066582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5066703:-1
position: 5066703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5059190-5060466:-1:exon

position:5060466:-1
position: 5060466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TENT5D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TENT5D
product: terminal nucleotidyltransferase 5D, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_021537713.2
SIO_010081: TENT5D
subclass of: SO_0000673
so part of: TENT5D
location: complement(join(5059190..5060466,5065364..5065478,5066582..5066703,5073221..5073368))
location: region:5059190-5073368:-1
so has part: feature:5073221-5073368:-1:exon
so has part: feature:5066582-5066703:-1:exon
so has part: feature:5065364-5065478:-1:exon
so has part: feature:5059190-5060466:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5073221-5073368:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5066582-5066703:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5065364-5065478:-1:exon

position:5065364:-1
position: 5065364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5065478:-1
position: 5065478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5059190-5060466:-1:exon

TENT5D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TENT5D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: terminal nucleotidyltransferase 5D isoform X1
translation: MTGSPSTFDIPAFGDYASCSSEPTNITMTEDLDHRFSYLTWDQIKILDQVLTEAIPIHGRGNFPTLEVKPKDIIHMVKEQLIEKQIHVRDIRLNGSTASHILVKHNGTSYKDLDIIFGVELPSELEFQVVKEAVLNCLLDFLPKCVNKQKITAQTMKDAYVQKMVKVSTDHDRWSLISLSNNSGKNVELKFVSSLRRQFEFSVDSFQIILDSILDIYRASDRPLTQDYHPAVIAESMYGDFNQAMDHLKYKLISTRNPEEIRGGGLLKYSNLLVRDFKPADEAEIKSLERYMCSRFFIDFPDVAEQQRKIESYLRNHFIGEEKSKYDYLMTLRGVVNKSTVCLMGHERRQTLNMITILALKVLGEQNIIPNAANVTCYYQPAPYISDRNFSNYYIAHGQPPVFYQLYPFHIQLQSGMV
SIO_010081: TENT5D
subclass of: SO_0000673
so part of: TENT5D
location: complement(join(5059276..5060466,5065364..5065429))
location: region:5059276-5065429:-1
so has part: feature:5065364-5065429:-1:exon
so has part: feature:5059276-5060466:-1:exon

XP_021393388.1
type: Protein
SIO_000068: ncbiprotein

position:5059276:-1
position: 5059276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5065429:-1
position: 5065429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5065364-5065429:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5059276-5060466:-1:exon

TENT5D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TENT5D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: terminal nucleotidyltransferase 5D isoform X2
translation: MTEDLDHRFSYLTWDQIKILDQVLTEAIPIHGRGNFPTLEVKPKDIIHMVKEQLIEKQIHVRDIRLNGSTASHILVKHNGTSYKDLDIIFGVELPSELEFQVVKEAVLNCLLDFLPKCVNKQKITAQTMKDAYVQKMVKVSTDHDRWSLISLSNNSGKNVELKFVSSLRRQFEFSVDSFQIILDSILDIYRASDRPLTQDYHPAVIAESMYGDFNQAMDHLKYKLISTRNPEEIRGGGLLKYSNLLVRDFKPADEAEIKSLERYMCSRFFIDFPDVAEQQRKIESYLRNHFIGEEKSKYDYLMTLRGVVNKSTVCLMGHERRQTLNMITILALKVLGEQNIIPNAANVTCYYQPAPYISDRNFSNYYIAHGQPPVFYQLYPFHIQLQSGMV
SIO_010081: TENT5D
subclass of: SO_0000673
so part of: TENT5D
location: complement(5059276..5060451)
location: region:5059276-5060451:-1
so has part: feature:5059276-5060451:-1:exon

XP_021393389.1
type: Protein
SIO_000068: ncbiprotein

position:5060451:-1
position: 5060451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5059276-5060451:-1:exon

CHMP1B
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: CHMP1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5087529..5096607
location: region:5087529-5096607:1
so has part: feature:5087529-5096607:1:exon
subclass of: SO_0000010

110474368
type: Gene
SIO_000068: ncbigene

position:5087529:1
position: 5087529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5096607:1
position: 5096607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5087529-5096607:1:exon

CHMP1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: CHMP1B
product: charged multivesicular body protein 1B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021537735.1
SIO_010081: CHMP1B
subclass of: SO_0000673
so part of: CHMP1B
location: join(5087529..5087632,5090214..5090311,5091028..5091174,5091961..5092029,5092174..5092281,5092631..5092674,5092978..5093050,5093633..5096607)
location: region:5087529-5096607:1
so has part: feature:5087529-5087632:1:exon
so has part: feature:5090214-5090311:1:exon
so has part: feature:5091028-5091174:1:exon
so has part: feature:5091961-5092029:1:exon
so has part: feature:5092174-5092281:1:exon
so has part: feature:5092631-5092674:1:exon
so has part: feature:5092978-5093050:1:exon
so has part: feature:5093633-5096607:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5087529-5087632:1:exon

position:5087632:1
position: 5087632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5090214-5090311:1:exon

position:5090214:1
position: 5090214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5090311:1
position: 5090311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5091028-5091174:1:exon

position:5091028:1
position: 5091028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5091174:1
position: 5091174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5091961-5092029:1:exon

position:5091961:1
position: 5091961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5092029:1
position: 5092029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5092174-5092281:1:exon

position:5092174:1
position: 5092174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5092281:1
position: 5092281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5092631-5092674:1:exon

position:5092631:1
position: 5092631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5092674:1
position: 5092674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5092978-5093050:1:exon

position:5092978:1
position: 5092978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5093050:1
position: 5093050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5093633-5096607:1:exon

position:5093633:1
position: 5093633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHMP1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: CHMP1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: charged multivesicular body protein 1b
translation: MANMEKHLFNLKFAAKELNRNSKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAINFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKSMNLEKISALMDKFEHQFETLDVQTQQMEDTMSNTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQGQTGSVGTSVASAEQDELSQRLARLRDQV
SIO_010081: CHMP1B
subclass of: SO_0000673
so part of: CHMP1B
location: join(5087617..5087632,5090214..5090311,5091028..5091174,5091961..5092029,5092174..5092281,5092631..5092674,5092978..5093050,5093633..5093677)
location: region:5087617-5093677:1
so has part: feature:5087617-5087632:1:exon
so has part: feature:5090214-5090311:1:exon
so has part: feature:5091028-5091174:1:exon
so has part: feature:5091961-5092029:1:exon
so has part: feature:5092174-5092281:1:exon
so has part: feature:5092631-5092674:1:exon
so has part: feature:5092978-5093050:1:exon
so has part: feature:5093633-5093677:1:exon

XP_021393410.1
type: Protein
SIO_000068: ncbiprotein

position:5087617:1
position: 5087617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5093677:1
position: 5093677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5087617-5087632:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5090214-5090311:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5091028-5091174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5091961-5092029:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5092174-5092281:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5092631-5092674:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5092978-5093050:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5093633-5093677:1:exon

TBX22
type: Gene
subclass of: SO_0000704
RO_0002162: 299123
gene: TBX22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5114378..5119747)
location: region:5114378-5119747:-1
so has part: feature:5114378-5119747:-1:exon
subclass of: SO_0000010

110474350
type: Gene
SIO_000068: ncbigene

position:5114378:-1
position: 5114378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5119747:-1
position: 5119747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5114378-5119747:-1:exon

TBX22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 299123
gene: TBX22
product: T-box transcription factor 22
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 25% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021537715.1
SIO_010081: TBX22
subclass of: SO_0000673
so part of: TBX22
location: complement(join(5114378..5114973,5117722..5117807,5117880..5117944,5118266..5118430,5118641..5118815,5118983..5119084,5119398..5119521,5119612..5119747))
location: region:5114378-5119747:-1
so has part: feature:5119612-5119747:-1:exon
so has part: feature:5119398-5119521:-1:exon
so has part: feature:5118983-5119084:-1:exon
so has part: feature:5118641-5118815:-1:exon
so has part: feature:5118266-5118430:-1:exon
so has part: feature:5117880-5117944:-1:exon
so has part: feature:5117722-5117807:-1:exon
so has part: feature:5114378-5114973:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5119612-5119747:-1:exon

position:5119612:-1
position: 5119612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5119398-5119521:-1:exon

position:5119398:-1
position: 5119398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5119521:-1
position: 5119521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5118983-5119084:-1:exon

position:5118983:-1
position: 5118983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5119084:-1
position: 5119084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5118641-5118815:-1:exon

position:5118641:-1
position: 5118641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5118815:-1
position: 5118815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5118266-5118430:-1:exon

position:5118266:-1
position: 5118266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5118430:-1
position: 5118430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5117880-5117944:-1:exon

position:5117880:-1
position: 5117880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5117944:-1
position: 5117944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5117722-5117807:-1:exon

position:5117722:-1
position: 5117722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5117807:-1
position: 5117807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5114378-5114973:-1:exon

position:5114973:-1
position: 5114973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TBX22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 299123
gene: TBX22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-box transcription factor TBX22
translation: MALSSRAHAFSVEALVGRSAKRKVPEGRDEEAGPGCRPGRRAPEAEKRPKAGAESRAGGVQVELQGSELWRRFHDIGTEMIITKAGRRMFPSVRVKVKGLEPLQQYYIAIDVVPVDSKRYRYVYHSSQWMVAGNTDHSCITPRLYIHPDSPCSGETWMRQIISFDRVKLTNNEMDDKGHIILQSMHKYKPRVHVIAQDSRFDLAQIQSLPAEGVQTFSFQETEFTTVTAYQNQQITKLKIDRNPFAKGFRDPGRNRGVLDGLLETYPWRAPLALDFKAFGADSQGGSSSSSPVASSSGTPSPLNPLLSPSCSPPTLHLPVSNLGMSCPESFLHPLNIPLYYKICPTSFLRQQALLLPSHEKLGATNPHLLPHFMVDVPKLSSLKNAKAEDLNAQCLQAPGSAGQMLYGLHASGNIFPSSPIAREALNCSLHPPYGLYGYNFSVPSRLMNAAGHFKVSDSIPAALRDGRCNHSNWHPTINHCL
SIO_010081: TBX22
subclass of: SO_0000673
so part of: TBX22
location: complement(join(5114378..5114973,5117722..5117807,5117880..5117944,5118266..5118430,5118641..5118815,5118983..5119084,5119398..5119521,5119612..5119747))
location: region:5114378-5119747:-1
so has part: feature:5119612-5119747:-1:exon
so has part: feature:5119398-5119521:-1:exon
so has part: feature:5118983-5119084:-1:exon
so has part: feature:5118641-5118815:-1:exon
so has part: feature:5118266-5118430:-1:exon
so has part: feature:5117880-5117944:-1:exon
so has part: feature:5117722-5117807:-1:exon
so has part: feature:5114378-5114973:-1:exon