Vitis vinifera cultivar PN40024 chromosome 10, 12X, whole genome shotgun sequence.
type: Entry
definition: Vitis vinifera cultivar PN40024 chromosome 10, 12X, whole genome shotgun sequence.
sequence version: NC_012016.3
sequence date: 2016-11-25
sequence: sequence
division: CON
label: NC_012016.3
type: RefSeq
SIO_000068: refseq
dblink: PRJNA33471
dblink: SAMEA2272750
keyword: WGS
keyword: RefSeq
source: Vitis vinifera (wine grape)
organism: Vitis vinifera
taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Vitis.
reference: 1
references: 17721507
reference: 2
references: 9023104
comment: REFSEQ INFORMATION: The reference sequence is identical to\nFN597030.1.\nOn Dec 7, 2011 this sequence version replaced gi:225570624.\nAssembly Name: 12X\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by GENOSCOPE, CRIBI (Consortium\nVIGNA) and IGA in September 2009\n(http://www.genoscope.cns.fr/vitis, http://www.vitisgenome.it/ and\nhttp://www.appliedgenomics.org). The original whole-genome shotgun\nproject has the accession CAAP00000000.3.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Vitis vinifera Annotation Release\n 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 7.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 18140952
topology: linear
so has quality: SO_0000987
location: 1..18140952
location: region:1-18140952:1
RO_0002162: 29760

NC_012016
type: RefSeq
SIO_000068: refseq

PRJNA33471
type: BioProject
SIO_000068: bioproject

SAMEA2272750
type: BioSample
SIO_000068: biosample

1
title: The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla
author: Jaillon, O.
author: Aury, J.M.
author: Noel, B.
author: Policriti, A.
author: Clepet, C.
author: Casagrande, A.
author: Choisne, N.
author: Aubourg, S.
author: Vitulo, N.
author: Jubin, C.
author: Vezzi, A.
author: Legeai, F.
author: Hugueney, P.
author: Dasilva, C.
author: Horner, D.
author: Mica, E.
author: Jublot, D.
author: Poulain, J.
author: Bruyere, C.
author: Billault, A.
author: Segurens, B.
author: Gouyvenoux, M.
author: Ugarte, E.
author: Cattonaro, F.
author: Anthouard, V.
author: Vico, V.
author: Del Fabbro, C.
author: Alaux, M.
author: Di Gaspero, G.
author: Dumas, V.
author: Felice, N.
author: Paillard, S.
author: Juman, I.
author: Moroldo, M.
author: Scalabrin, S.
author: Canaguier, A.
author: Le Clainche, I.
author: Malacrida, G.
author: Durand, E.
author: Pesole, G.
author: Laucou, V.
author: Chatelet, P.
author: Merdinoglu, D.
author: Delledonne, M.
author: Pezzotti, M.
author: Lecharny, A.
author: Scarpelli, C.
author: Artiguenave, F.
author: Pe, M.E.
author: Valle, G.
author: Morgante, M.
author: Caboche, M.
author: Adam-Blondon, A.F.
author: Weissenbach, J.
author: Quetier, F.
author: Wincker, P.
journal: Nature
volume: 449
issue: 7161
pages: 463-467
year: 2007
pubmed: 17721507

17721507
type: PubMed
SIO_000068: pubmed

2
title: tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
author: Lowe, T.M.
author: Eddy, S.R.
journal: Nucleic Acids Res.
volume: 25
issue: 5
pages: 955-964
year: 1997
pubmed: 9023104
comments: This is the methods paper for tRNAscan-SE.

9023104
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18140952:1
position: 18140952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-18140952:1:source
so part of: sequence
organism: Vitis vinifera
mol type: genomic DNA
cultivar: PN40024
chromosome: 10

29760
type: Taxonomy
SIO_000068: taxonomy

LOC100253788
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100253788
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(36094..>37832)
location: region:36094-37832:-1
so has part: feature:36094-37832:-1:exon
subclass of: SO_0000010

100253788
type: Gene
SIO_000068: ncbigene

position:36094:-1
position: 36094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37832:-1
position: 37832
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36094-37832:-1:exon

LOC100253788
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100253788
product: uncharacterized LOC100253788
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010657042.2
SIO_010081: LOC100253788
subclass of: SO_0000673
so part of: LOC100253788
location: complement(36094..>37832)
location: region:36094-37832:-1
so has part: feature:36094-37832:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36094-37832:-1:exon

LOC100253788
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100253788
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100253788
translation: FPNQEKRRGSLQQQQQQQMKEDLEMGEELMQQLRSRATELLLREEWNESVQAYSHFISLCQHHISRIHQHADPDHLFKLQKSLCLALSNRAEARSRLRDLANALQDCDGALEIEGTHFKTLLCKGKILLGLNRYSLALDCFKAALLDPQAGLKCGALEGYLERCKKLEHQSRTGAFDLSDWVVNGFRGKFPELAEYIGAVQIMKSEISGRGLFATKNVDAGTLVLVTKAIATERCILPEQNDDSADNIQLVMWKNFIDKVVESASKCKRLHHLISVLSNGEDEDVLEVPDVNLFRPETEESGLSMGKLDMGKILSILDVNSLVEDATSAKVLGKNSDYYGVGLWILPAFINHSCNPNARRLHVGDNVIVHTSRDVKAGEEITFAYFDVLSPWRKRKDMAKTWGFQCNCKRCKFEEQICSKMEIQEIQMGLERGLDMGDAIYRLEEGMRRWTVRGKEKGYLRASFWAAYSEAYESEKTVRRWGRRIPAVEAVVDSVLEAVGSDERVLKAFMAGLKRSGGGGVVEIERAMKLARGVYGKVVKKQAMRTLISLGY
SIO_010081: LOC100253788
subclass of: SO_0000673
so part of: LOC100253788
location: complement(36174..>37832)
location: region:36174-37832:-1
so has part: feature:36174-37832:-1:exon

XP_010655344.2
type: Protein
SIO_000068: ncbiprotein

position:36174:-1
position: 36174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36174-37832:-1:exon

LOC104880468
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC104880468
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(53269..53676)
location: region:53269-53676:-1
so has part: feature:53269-53676:-1:exon
subclass of: SO_0000010

104880468
type: Gene
SIO_000068: ncbigene

position:53269:-1
position: 53269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53676:-1
position: 53676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53269-53676:-1:exon

LOC104880468
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104880468
product: uncharacterized LOC104880468
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_010657106.1
SIO_010081: LOC104880468
subclass of: SO_0000673
so part of: LOC104880468
location: complement(53269..53676)
location: region:53269-53676:-1
so has part: feature:53269-53676:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:53269-53676:-1:exon

LOC104880468
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104880468
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC104880468
translation: MTWILSSVEPHLVLNLRPYKTAAAMWNYLYTVYNQDNFARRFQLEYEMTNFTQESLSIEEYFFGFQTLWTYYSDIVYANVPVAALFAVQVVHAISKRDQFLMKLRPDFEIARSNMMNHHPVPSLDACLSELLREE
SIO_010081: LOC104880468
subclass of: SO_0000673
so part of: LOC104880468
location: complement(53269..53676)
location: region:53269-53676:-1
so has part: feature:53269-53676:-1:exon

XP_010655408.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53269-53676:-1:exon

LOC100246953
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100246953
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(68015..70588)
location: region:68015-70588:-1
so has part: feature:68015-70588:-1:exon
subclass of: SO_0000010

100246953
type: Gene
SIO_000068: ncbigene

position:68015:-1
position: 68015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70588:-1
position: 70588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68015-70588:-1:exon

LOC100246953
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100246953
product: cysteine-rich receptor-like protein kinase 15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
transcript id: XM_019222511.1
SIO_010081: LOC100246953
subclass of: SO_0000673
so part of: LOC100246953
location: complement(join(68015..68152,68263..68413,68500..68737,68821..69031,69127..69263,69392..69508,69844..70588))
location: region:68015-70588:-1
so has part: feature:69844-70588:-1:exon
so has part: feature:69392-69508:-1:exon
so has part: feature:69127-69263:-1:exon
so has part: feature:68821-69031:-1:exon
so has part: feature:68500-68737:-1:exon
so has part: feature:68263-68413:-1:exon
so has part: feature:68015-68152:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:69844-70588:-1:exon

position:69844:-1
position: 69844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:69392-69508:-1:exon

position:69392:-1
position: 69392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69508:-1
position: 69508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:69127-69263:-1:exon

position:69127:-1
position: 69127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69263:-1
position: 69263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:68821-69031:-1:exon

position:68821:-1
position: 68821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69031:-1
position: 69031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:68500-68737:-1:exon

position:68500:-1
position: 68500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68737:-1
position: 68737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:68263-68413:-1:exon

position:68263:-1
position: 68263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68413:-1
position: 68413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:68015-68152:-1:exon

position:68152:-1
position: 68152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100246953
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100246953
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine-rich receptor-like protein kinase 15
translation: MKTDKDLLSAMLLLLPSLVLLLTPVTADPLGKVRSNKTYTPNSPFENNLKGLLQSLSSNTHLTGFNSASVGSNTNQVHGRALCRGDVAAQDCKNCVENASQEIMKVCKSEEAIIWYEFCQVQYSYQMFSVMVYTGKYPDSNSQKKNVSDPGHFYSFQKDLMGNLTNDAAFDHAKLMFAVGETKLSRNLTIYGLVQCTRDQPGGFCSNCLMSAFGDLSGCCKTHEGGTILRSCNMRFEVHRFYTVPTVNAGEWKMWMLVLVICIPIFAPAVLIGSCILYRRGRKGTQNVAMIQEGSLLGPQELPFMDFATVKAATDNISDSNKLGQGGFGTVFKGVLPNGNEIAVKRLSRKSWQGAEEVKNEIILIAKLQHRNLVRFLGCGIEGDEKLLRYEFMPNKSLDIFIFDEDKELQFNWETRHNIINGIARGLLYLYEDSRLKIIHRDLKPNNVLLDHDMVAKISDFGMARIFCEKQNAANTRRIVGTYGYIAPEYAMEGIFSVKSDAFSFGVILLEIISGKRNSGFYLTQLAPTLLAYAWRLWNEGKELEFVDSLLTESCPAEEILMQWLYRSRVHMSWALLN
SIO_010081: LOC100246953
subclass of: SO_0000673
so part of: LOC100246953
location: complement(join(68015..68152,68263..68413,68500..68737,68821..69031,69127..69263,69392..69508,69844..70588))
location: region:68015-70588:-1
so has part: feature:69844-70588:-1:exon
so has part: feature:69392-69508:-1:exon
so has part: feature:69127-69263:-1:exon
so has part: feature:68821-69031:-1:exon
so has part: feature:68500-68737:-1:exon
so has part: feature:68263-68413:-1:exon
so has part: feature:68015-68152:-1:exon

XP_019078056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69844-70588:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:69392-69508:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:69127-69263:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:68821-69031:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:68500-68737:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:68263-68413:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:68015-68152:-1:exon

LOC109121465
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC109121465
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(72019..75272)
location: region:72019-75272:-1
so has part: feature:72019-75272:-1:exon
subclass of: SO_0000010

109121465
type: Gene
SIO_000068: ncbigene

position:72019:-1
position: 72019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75272:-1
position: 75272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72019-75272:-1:exon

LOC109121465
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC109121465
product: cysteine-rich receptor-like protein kinase 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_019222472.1
SIO_010081: LOC109121465
subclass of: SO_0000673
so part of: LOC109121465
location: complement(join(72019..72625,72721..72871,73033..73270,73396..73606,73675..73877,73982..74098,74219..75270))
location: region:72019-75270:-1
so has part: feature:74219-75270:-1:exon
so has part: feature:73982-74098:-1:exon
so has part: feature:73675-73877:-1:exon
so has part: feature:73396-73606:-1:exon
so has part: feature:73033-73270:-1:exon
so has part: feature:72721-72871:-1:exon
so has part: feature:72019-72625:-1:exon

position:75270:-1
position: 75270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74219-75270:-1:exon

position:74219:-1
position: 74219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:73982-74098:-1:exon

position:73982:-1
position: 73982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74098:-1
position: 74098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:73675-73877:-1:exon

position:73675:-1
position: 73675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73877:-1
position: 73877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:73396-73606:-1:exon

position:73396:-1
position: 73396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73606:-1
position: 73606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:73033-73270:-1:exon

position:73033:-1
position: 73033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73270:-1
position: 73270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:72721-72871:-1:exon

position:72721:-1
position: 72721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72871:-1
position: 72871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:72019-72625:-1:exon

position:72625:-1
position: 72625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109121465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC109121465
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine-rich receptor-like protein kinase 10 isoform X1
translation: MMSSQGVSKAIQLLFISSVLSGFPDLVCADPPYNVCSTTTTYGLNSLFQSNLENLLDSLPSKAFVSHFDNTSIGNGLDRVNGAFLCLNYVANDQCRNCISTAAYHVKKLCPNMNEAIVWEDECQILYSNETFLGHLSTTGNIPLDNMKNVSDLESEQLRFRSVVNDTLQNLIKQAAFNSSTDMYATKPVVFTDVDILYALVQCTPDLSPDNCSICLQTATTEILAVYYFSRGARLLSRSCYLRYEFYPFYEVATEPQAPVSPQNPGTRKDGRRKTGMILIITSVSVSLVVATLAFYVYCLATRNGKKKERKQYLNREVQLPDIDDPSYTGPYQFHGRKSLNSQEFLFIDLATIHEATDNFSELNKLGQGGFGPVYKGVLRDGKEVAVKRLSSDSEQGSEEFTNEVLLIMKLQHKNLVRLLGFCVDREERMLVYEYMPNSSLDVFLFDPRRRAQLDWSRRLNIIGGIARGILYLHEDSRLRIIHRDLKASNVLLDCDMKPKISDFGMARIFGGSEGEANTATIVGTHGYMAPEYAMEGLYSVKSDVFSFGVLLLEIITGRRNSGFHLSKRAPSLISYAWQLWNEGKGSELMDPLLTDSCCQNEFLRCYHIGLLCVQEDAFDRPTMSSVVMLKSETVTLRQPERPAFSIGRFTDCDEKNACGCSVNGLTVSNIGPR
SIO_010081: LOC109121465
subclass of: SO_0000673
so part of: LOC109121465
location: complement(join(72329..72625,72721..72871,73033..73270,73396..73606,73675..73877,73982..74098,74219..75026))
location: region:72329-75026:-1
so has part: feature:74219-75026:-1:exon
so has part: feature:73982-74098:-1:exon
so has part: feature:73675-73877:-1:exon
so has part: feature:73396-73606:-1:exon
so has part: feature:73033-73270:-1:exon
so has part: feature:72721-72871:-1:exon
so has part: feature:72329-72625:-1:exon

XP_019078017.1
type: Protein
SIO_000068: ncbiprotein

position:72329:-1
position: 72329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75026:-1
position: 75026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74219-75026:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:73982-74098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:73675-73877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:73396-73606:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:73033-73270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:72721-72871:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:72329-72625:-1:exon

LOC109121465
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC109121465
product: cysteine-rich receptor-like protein kinase 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_019222473.1
SIO_010081: LOC109121465
subclass of: SO_0000673
so part of: LOC109121465
location: complement(join(72796..72947,73033..73270,73396..73606,73675..73877,73982..74098,74219..75272))
location: region:72796-75272:-1
so has part: feature:74219-75272:-1:exon
so has part: feature:73982-74098:-1:exon
so has part: feature:73675-73877:-1:exon
so has part: feature:73396-73606:-1:exon
so has part: feature:73033-73270:-1:exon
so has part: feature:72796-72947:-1:exon

position:72796:-1
position: 72796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74219-75272:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:73982-74098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:73675-73877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:73396-73606:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:73033-73270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:72796-72947:-1:exon

position:72947:-1
position: 72947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109121465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC109121465
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine-rich receptor-like protein kinase 10 isoform X2
translation: MMSSQGVSKAIQLLFISSVLSGFPDLVCADPPYNVCSTTTTYGLNSLFQSNLENLLDSLPSKAFVSHFDNTSIGNGLDRVNGAFLCLNYVANDQCRNCISTAAYHVKKLCPNMNEAIVWEDECQILYSNETFLGHLSTTGNIPLDNMKNVSDLESEQLRFRSVVNDTLQNLIKQAAFNSSTDMYATKPVVFTDVDILYALVQCTPDLSPDNCSICLQTATTEILAVYYFSRGARLLSRSCYLRYEFYPFYEVATEPQAPVSPQNPGTRKDGRRKTGMILIITSVSVSLVVATLAFYVYCLATRNGKKKERKQYLNREVQLPDIDDPSYTGPYQFHGRKSLNSQEFLFIDLATIHEATDNFSELNKLGQGGFGPVYKGVLRDGKEVAVKRLSSDSEQGSEEFTNEVLLIMKLQHKNLVRLLGFCVDREERMLVYEYMPNSSLDVFLFDPRRRAQLDWSRRLNIIGGIARGILYLHEDSRLRIIHRDLKASNVLLDCDMKPKISDFGMARIFGGSEGEANTATIVGTQKYPSPCYMLSPGHPQL
SIO_010081: LOC109121465
subclass of: SO_0000673
so part of: LOC109121465
location: complement(join(72896..72947,73033..73270,73396..73606,73675..73877,73982..74098,74219..75026))
location: region:72896-75026:-1
so has part: feature:74219-75026:-1:exon
so has part: feature:73982-74098:-1:exon
so has part: feature:73675-73877:-1:exon
so has part: feature:73396-73606:-1:exon
so has part: feature:73033-73270:-1:exon
so has part: feature:72896-72947:-1:exon

XP_019078018.1
type: Protein
SIO_000068: ncbiprotein

position:72896:-1
position: 72896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74219-75026:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:73982-74098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:73675-73877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:73396-73606:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:73033-73270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:72896-72947:-1:exon

LOC100257214
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100257214
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(77027..80085)
location: region:77027-80085:-1
so has part: feature:77027-80085:-1:exon
subclass of: SO_0000010

100257214
type: Gene
SIO_000068: ncbigene

position:77027:-1
position: 77027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80085:-1
position: 80085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77027-80085:-1:exon

LOC100257214
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100257214
product: cysteine-rich receptor-like protein kinase 15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_002265589.4
SIO_010081: LOC100257214
subclass of: SO_0000673
so part of: LOC100257214
location: complement(join(77027..77494,77611..77761,77845..78082,78206..78416,78509..78699,78777..78890,79143..80085))
location: region:77027-80085:-1
so has part: feature:79143-80085:-1:exon
so has part: feature:78777-78890:-1:exon
so has part: feature:78509-78699:-1:exon
so has part: feature:78206-78416:-1:exon
so has part: feature:77845-78082:-1:exon
so has part: feature:77611-77761:-1:exon
so has part: feature:77027-77494:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:79143-80085:-1:exon

position:79143:-1
position: 79143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:78777-78890:-1:exon

position:78777:-1
position: 78777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78890:-1
position: 78890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:78509-78699:-1:exon

position:78509:-1
position: 78509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78699:-1
position: 78699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:78206-78416:-1:exon

position:78206:-1
position: 78206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78416:-1
position: 78416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:77845-78082:-1:exon

position:77845:-1
position: 77845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78082:-1
position: 78082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:77611-77761:-1:exon

position:77611:-1
position: 77611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77761:-1
position: 77761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:77027-77494:-1:exon

position:77494:-1
position: 77494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100257214
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100257214
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine-rich receptor-like protein kinase 15
translation: MTMCSQILKTDKELTFSHVFLLLPLLLLSTPAIAQPMYTFCDSGTGNYTSNSSFENNLKHLLQSLPSNTYLTCFNITSMGIDANRVSGRALCRGDVTDKVCWICLENASREIMKECKSQEAIIWYELCQVHYSYRILSGMDAYTGKYPLWNNQEKNVSDPLSFYEVLNDLMRNLTIKAAQGPSKLMFGTDQVKFSRSDTIYGLVQCTRDLTVDSCRKCLSSALGDLKACCYGRGGGTIFSRSCNMRYGLTRFYDTPSVKGEWKTWMIVLVICVPTFAAAVLVGSCVLYYRGRTGTQNDEEKSQRALLHNLATPTAAAITQEFNLLSSQELPFMELATIRAATNDFSESNKLGHGGFGTVYKGVLPNGKEIAVKRLSKKSWQGIEEFKNEIILIAKLQHRNLVRLLGCGTEGQEKLLIYEFMPNKSLDIFIFDADKRQQLNWEICHNIIDGIARGLLYLHEDSRLKIIHRDLKPNNVLLNHDMVAKISDFGMARIFGENQNAANTRRIVGTYGYMAPEYAMEGMFSMKSDVFSFGVILLEIISGKRNSGFHLTGHAHTLPAYAWKLWNEGKGLEFVHPLLTESCPTEVVLRCIHIGLLCVQENPADRLTMSSVVVLLESKSMALPEPKQPPFSVGIAIQFNQSPTTPLSVNELAVSSFLPR
SIO_010081: LOC100257214
subclass of: SO_0000673
so part of: LOC100257214
location: complement(join(77195..77494,77611..77761,77845..78082,78206..78416,78509..78699,78777..78890,79143..79920))
location: region:77195-79920:-1
so has part: feature:79143-79920:-1:exon
so has part: feature:78777-78890:-1:exon
so has part: feature:78509-78699:-1:exon
so has part: feature:78206-78416:-1:exon
so has part: feature:77845-78082:-1:exon
so has part: feature:77611-77761:-1:exon
so has part: feature:77195-77494:-1:exon

XP_002265625.3
type: Protein
SIO_000068: ncbiprotein

position:77195:-1
position: 77195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79920:-1
position: 79920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79143-79920:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78777-78890:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78509-78699:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:78206-78416:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:77845-78082:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:77611-77761:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:77195-77494:-1:exon

LOC104880470
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC104880470
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(80839..88751)
location: region:80839-88751:-1
so has part: feature:80839-88751:-1:exon

104880470
type: Gene
SIO_000068: ncbigene

position:80839:-1
position: 80839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88751:-1
position: 88751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80839-88751:-1:exon

LOC104880470
type: Exon
subclass of: SO_0000147
RO_0002162: 29760
gene: LOC104880470
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 12% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104880470
subclass of: SO_0000673
so part of: LOC104880470
location: complement(80839..80877)
location: region:80839-80877:-1
so has part: feature:80839-80877:-1:exon

position:80877:-1
position: 80877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80839-80877:-1:exon

LOC104880470
type: Exon
subclass of: SO_0000147
RO_0002162: 29760
gene: LOC104880470
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 12% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104880470
subclass of: SO_0000673
so part of: LOC104880470
location: complement(80960..81082)
location: region:80960-81082:-1
so has part: feature:80960-81082:-1:exon

position:80960:-1
position: 80960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81082:-1
position: 81082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80960-81082:-1:exon

LOC104880470
type: Exon
subclass of: SO_0000147
RO_0002162: 29760
gene: LOC104880470
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 12% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104880470
subclass of: SO_0000673
so part of: LOC104880470
location: complement(81657..81807)
location: region:81657-81807:-1
so has part: feature:81657-81807:-1:exon

position:81657:-1
position: 81657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81807:-1
position: 81807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81657-81807:-1:exon

LOC104880470
type: Exon
subclass of: SO_0000147
RO_0002162: 29760
gene: LOC104880470
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 12% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104880470
subclass of: SO_0000673
so part of: LOC104880470
location: complement(81903..82137)
location: region:81903-82137:-1
so has part: feature:81903-82137:-1:exon

position:81903:-1
position: 81903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82137:-1
position: 82137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81903-82137:-1:exon

LOC104880470
type: Exon
subclass of: SO_0000147
RO_0002162: 29760
gene: LOC104880470
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 12% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104880470
subclass of: SO_0000673
so part of: LOC104880470
location: complement(87355..87565)
location: region:87355-87565:-1
so has part: feature:87355-87565:-1:exon

position:87355:-1
position: 87355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87565:-1
position: 87565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87355-87565:-1:exon

LOC104880470
type: Exon
subclass of: SO_0000147
RO_0002162: 29760
gene: LOC104880470
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 12% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104880470
subclass of: SO_0000673
so part of: LOC104880470
location: complement(88509..88751)
location: region:88509-88751:-1
so has part: feature:88509-88751:-1:exon

position:88509:-1
position: 88509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88509-88751:-1:exon

LOC100250298
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100250298
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 118941..122406
location: region:118941-122406:1
so has part: feature:118941-122406:1:exon
subclass of: SO_0000010

100250298
type: Gene
SIO_000068: ncbigene

position:118941:1
position: 118941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122406:1
position: 122406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118941-122406:1:exon

LOC100250298
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100250298
product: pentatricopeptide repeat-containing protein At1g09220, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 122 samples with support for all annotated introns
transcript id: XM_019222750.1
SIO_010081: LOC100250298
subclass of: SO_0000673
so part of: LOC100250298
location: join(118941..121742,121988..122406)
location: region:118941-122406:1
so has part: feature:118941-121742:1:exon
so has part: feature:121988-122406:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:118941-121742:1:exon

position:121742:1
position: 121742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:121988-122406:1:exon

position:121988:1
position: 121988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100250298
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100250298
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein At1g09220, mitochondrial
translation: MTLNRTIKQAAHLQRRNLLSLLLQQQTRRSAMQQLHSHLITTGAHSHCMDVTSWNVLLRHYSLGIFPQEAFLLFRHLRLHHVYPPLSFDSFSFSFLLKACANLQHREGGLQLHALTLKLGFEFHVYVHTVLLNVYAACGAFLEAKQVFDEMPVRNSVTWNVFITGLAKWGELHLACSLLDEMPRPTVVSWTTIIDGYTRMNQPKQALALFLTMFLDEGIKPTEITLLAIFPAISNLGALEICQLIHTYGEKSGLNASDIRIRTSLLDTYAKCGCIESASGVFGEIAAKGRNLVSWTSIISAFAMHGMAKEALENFERMQKECLKPNRITFLSVLNACSHGGLVEEGLKLFTKMVNECQISPDVKHYGCLIDMLGRAGRLDEAEKMALEIPDYVVNVVIWRTLLGACSFHGNVEMGARVTRKILEMERKYGGDYVLLSNIFAGVGRFWDVERVRRLMDERNASKVPGLSFF
SIO_010081: LOC100250298
subclass of: SO_0000673
so part of: LOC100250298
location: 119119..120531
location: region:119119-120531:1
so has part: feature:119119-120531:1:exon

XP_019078295.1
type: Protein
SIO_000068: ncbiprotein

position:119119:1
position: 119119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120531:1
position: 120531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119119-120531:1:exon

LOC100255478
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100255478
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 123332..129624
location: region:123332-129624:1
so has part: feature:123332-129624:1:exon
subclass of: SO_0000010

100255478
type: Gene
SIO_000068: ncbigene

position:123332:1
position: 123332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129624:1
position: 129624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123332-129624:1:exon

LOC100255478
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100255478
product: probable UDP-3-O-acylglucosamine N-acyltransferase 2, mitochondrial, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_010657044.2
SIO_010081: LOC100255478
subclass of: SO_0000673
so part of: LOC100255478
location: join(123332..123633,124793..125000,125627..125703,126748..126797,127843..127907,128035..128086,128161..128231,128365..128431,129024..129104,129230..129624)
location: region:123332-129624:1
so has part: feature:123332-123633:1:exon
so has part: feature:124793-125000:1:exon
so has part: feature:125627-125703:1:exon
so has part: feature:126748-126797:1:exon
so has part: feature:127843-127907:1:exon
so has part: feature:128035-128086:1:exon
so has part: feature:128161-128231:1:exon
so has part: feature:128365-128431:1:exon
so has part: feature:129024-129104:1:exon
so has part: feature:129230-129624:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:123332-123633:1:exon

position:123633:1
position: 123633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:124793-125000:1:exon

position:124793:1
position: 124793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125000:1
position: 125000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:125627-125703:1:exon

position:125627:1
position: 125627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125703:1
position: 125703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:126748-126797:1:exon

position:126748:1
position: 126748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126797:1
position: 126797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:127843-127907:1:exon

position:127843:1
position: 127843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127907:1
position: 127907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:128035-128086:1:exon

position:128035:1
position: 128035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128086:1
position: 128086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:128161-128231:1:exon

position:128161:1
position: 128161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128231:1
position: 128231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:128365-128431:1:exon

position:128365:1
position: 128365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128431:1
position: 128431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:129024-129104:1:exon

position:129024:1
position: 129024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129104:1
position: 129104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:129230-129624:1:exon

position:129230:1
position: 129230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100255478
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100255478
product: probable UDP-3-O-acylglucosamine N-acyltransferase 2, mitochondrial, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 163 samples with support for all annotated introns
transcript id: XM_010657045.2
SIO_010081: LOC100255478
subclass of: SO_0000673
so part of: LOC100255478
location: join(123332..123633,124793..125000,125627..125703,126748..126797,127843..127907,128035..128086,128161..128231,128365..128431,129024..129095,129230..129614)
location: region:123332-129614:1
so has part: feature:123332-123633:1:exon
so has part: feature:124793-125000:1:exon
so has part: feature:125627-125703:1:exon
so has part: feature:126748-126797:1:exon
so has part: feature:127843-127907:1:exon
so has part: feature:128035-128086:1:exon
so has part: feature:128161-128231:1:exon
so has part: feature:128365-128431:1:exon
so has part: feature:129024-129095:1:exon
so has part: feature:129230-129614:1:exon

position:129614:1
position: 129614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123332-123633:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:124793-125000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:125627-125703:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126748-126797:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127843-127907:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:128035-128086:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:128161-128231:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:128365-128431:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:129024-129095:1:exon

position:129095:1
position: 129095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:129230-129614:1:exon

LOC100255478
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100255478
product: probable UDP-3-O-acylglucosamine N-acyltransferase 2, mitochondrial, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_019222751.1
SIO_010081: LOC100255478
subclass of: SO_0000673
so part of: LOC100255478
location: join(123332..123633,124793..125000,125627..125703,126748..126797,127843..127907,128035..128086,128161..128231,128365..128431,128674..129017)
location: region:123332-129017:1
so has part: feature:123332-123633:1:exon
so has part: feature:124793-125000:1:exon
so has part: feature:125627-125703:1:exon
so has part: feature:126748-126797:1:exon
so has part: feature:127843-127907:1:exon
so has part: feature:128035-128086:1:exon
so has part: feature:128161-128231:1:exon
so has part: feature:128365-128431:1:exon
so has part: feature:128674-129017:1:exon

position:129017:1
position: 129017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123332-123633:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:124793-125000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:125627-125703:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126748-126797:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127843-127907:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:128035-128086:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:128161-128231:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:128365-128431:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:128674-129017:1:exon

position:128674:1
position: 128674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100255478
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100255478
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable UDP-3-O-acylglucosamine N-acyltransferase 2, mitochondrial isoform X1
translation: MAINLSKLALRRSFAPIPRLISTAPDRYHFSVCSIDEAPSLGSSTRTEDGANINHQEFQKWHNGGGMFHKTACIESTTLIEIGAVVHSECVVAANVHIGSGTIVGPAVKIGESTKIEYNVSVTNCTIGDACFIHNGVCIGQDGFGFFVDEHGNMMKKAQMLSARIGNHVEIGANTCIDRGSWRDTVIGDHSKIDNLVQIGHNVVIGKNCILCGQVGIAGSVTMGDYVTLAGRVAVRDHVSIVSKVRLAANSVVTKDIKEPGDYGGFPAVRTVPIHEWRKQVAALQTLKKRAP
SIO_010081: LOC100255478
subclass of: SO_0000673
so part of: LOC100255478
location: join(123492..123633,124793..125000,125627..125703,126748..126797,127843..127907,128035..128086,128161..128231,128365..128431,129024..129104,129230..129295)
location: region:123492-129295:1
so has part: feature:123492-123633:1:exon
so has part: feature:124793-125000:1:exon
so has part: feature:125627-125703:1:exon
so has part: feature:126748-126797:1:exon
so has part: feature:127843-127907:1:exon
so has part: feature:128035-128086:1:exon
so has part: feature:128161-128231:1:exon
so has part: feature:128365-128431:1:exon
so has part: feature:129024-129104:1:exon
so has part: feature:129230-129295:1:exon

XP_010655346.1
type: Protein
SIO_000068: ncbiprotein

position:123492:1
position: 123492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129295:1
position: 129295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123492-123633:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:124793-125000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:125627-125703:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126748-126797:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127843-127907:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:128035-128086:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:128161-128231:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:128365-128431:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:129024-129104:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:129230-129295:1:exon

LOC100255478
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100255478
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable UDP-3-O-acylglucosamine N-acyltransferase 2, mitochondrial isoform X2
translation: MAINLSKLALRRSFAPIPRLISTAPDRYHFSVCSIDEAPSLGSSTRTEDGANINHQEFQKWHNGGGMFHKTACIESTTLIEIGAVVHSECVVAANVHIGSGTIVGPAVKIGESTKIEYNVSVTNCTIGDACFIHNGVCIGQDGFGFFVDEHGNMMKKAQMLSARIGNHVEIGANTCIDRGSWRDTVIGDHSKIDNLVQIGHNVVIGKNCILCGQVGIAGSVTMGDYVTLAGRVAVRDHVSIVSKVRLAANSVVTKDIKEPGDYGGFPAVPIHEWRKQVAALQTLKKRAP
SIO_010081: LOC100255478
subclass of: SO_0000673
so part of: LOC100255478
location: join(123492..123633,124793..125000,125627..125703,126748..126797,127843..127907,128035..128086,128161..128231,128365..128431,129024..129095,129230..129295)
location: region:123492-129295:1
so has part: feature:123492-123633:1:exon
so has part: feature:124793-125000:1:exon
so has part: feature:125627-125703:1:exon
so has part: feature:126748-126797:1:exon
so has part: feature:127843-127907:1:exon
so has part: feature:128035-128086:1:exon
so has part: feature:128161-128231:1:exon
so has part: feature:128365-128431:1:exon
so has part: feature:129024-129095:1:exon
so has part: feature:129230-129295:1:exon

XP_010655347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123492-123633:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:124793-125000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:125627-125703:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126748-126797:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127843-127907:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:128035-128086:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:128161-128231:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:128365-128431:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:129024-129095:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:129230-129295:1:exon

LOC100255478
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100255478
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable UDP-3-O-acylglucosamine N-acyltransferase 2, mitochondrial isoform X3
translation: MAINLSKLALRRSFAPIPRLISTAPDRYHFSVCSIDEAPSLGSSTRTEDGANINHQEFQKWHNGGGMFHKTACIESTTLIEIGAVVHSECVVAANVHIGSGTIVGPAVKIGESTKIEYNVSVTNCTIGDACFIHNGVCIGQDGFGFFVDEHGNMMKKAQMLSARIGNHVEIGANTCIDRGSWRDTVIGDHSKIDNLVQIGHNVVIGKNCILCGQVGIAGSVTMGDYVTLAGRVAVRDHVSIVSKDVGISPSRPM
SIO_010081: LOC100255478
subclass of: SO_0000673
so part of: LOC100255478
location: join(123492..123633,124793..125000,125627..125703,126748..126797,127843..127907,128035..128086,128161..128231,128365..128431,128674..128706)
location: region:123492-128706:1
so has part: feature:123492-123633:1:exon
so has part: feature:124793-125000:1:exon
so has part: feature:125627-125703:1:exon
so has part: feature:126748-126797:1:exon
so has part: feature:127843-127907:1:exon
so has part: feature:128035-128086:1:exon
so has part: feature:128161-128231:1:exon
so has part: feature:128365-128431:1:exon
so has part: feature:128674-128706:1:exon

XP_019078296.1
type: Protein
SIO_000068: ncbiprotein

position:128706:1
position: 128706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123492-123633:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:124793-125000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:125627-125703:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126748-126797:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127843-127907:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:128035-128086:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:128161-128231:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:128365-128431:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:128674-128706:1:exon

LOC100265764
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100265764
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(132527..133466)
location: region:132527-133466:-1
so has part: feature:132527-133466:-1:exon
subclass of: SO_0000010

100265764
type: Gene
SIO_000068: ncbigene

position:132527:-1
position: 132527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133466:-1
position: 133466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132527-133466:-1:exon

LOC100265764
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100265764
product: NDR1/HIN1-Like protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_002265305.3
SIO_010081: LOC100265764
subclass of: SO_0000673
so part of: LOC100265764
location: complement(132527..133466)
location: region:132527-133466:-1
so has part: feature:132527-133466:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:132527-133466:-1:exon

LOC100265764
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100265764
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NDR1/HIN1-Like protein 3
translation: MNSTGRQTAPPIKRHHTARYYAHRVRESLTTRVFKIICSIFLGLLLVVGFLTFILWLSLRPHRPRFHIHEFSVPNLTEGAGFTEITFNVTARNSNQNVGIYYDSMEASIYYKDQRVATTSLLFPFYQEPKNTTVIYKELNGNSITENSERTMELMNDVAKGTVVFGLELTSTIRFKVSTWKTKGHRMHANCDVRVGQDGNILGAYKDKRCPVYFT
SIO_010081: LOC100265764
subclass of: SO_0000673
so part of: LOC100265764
location: complement(132655..133302)
location: region:132655-133302:-1
so has part: feature:132655-133302:-1:exon

XP_002265341.1
type: Protein
SIO_000068: ncbiprotein

position:132655:-1
position: 132655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133302:-1
position: 133302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132655-133302:-1:exon

LOC100262330
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100262330
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(155483..157044)
location: region:155483-157044:-1
so has part: feature:155483-157044:-1:exon
subclass of: SO_0000010

100262330
type: Gene
SIO_000068: ncbigene

position:155483:-1
position: 155483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157044:-1
position: 157044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155483-157044:-1:exon

LOC100262330
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100262330
product: peroxidase 27
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 20 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_002268324.3
SIO_010081: LOC100262330
subclass of: SO_0000673
so part of: LOC100262330
location: complement(join(155483..156075,156162..156327,156422..156607,156701..157044))
location: region:155483-157044:-1
so has part: feature:156701-157044:-1:exon
so has part: feature:156422-156607:-1:exon
so has part: feature:156162-156327:-1:exon
so has part: feature:155483-156075:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:156701-157044:-1:exon

position:156701:-1
position: 156701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:156422-156607:-1:exon

position:156422:-1
position: 156422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156607:-1
position: 156607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:156162-156327:-1:exon

position:156162:-1
position: 156162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156327:-1
position: 156327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:155483-156075:-1:exon

position:156075:-1
position: 156075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100262330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100262330
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxidase 27
translation: MVASKGFYCLFLQLLLLSFVFDVANSQGLKVGFYRKTCPNAEAIVKKVVDQAMSVAPSLSGPLLRMHFHDCFVRGCEGSVLLNSSTQQAEKDAFPNLSLRGYQVIDRVKSALEKACPGVVSCSDILALVARDVVVAMKGPSWKVETGRRDGRVSNITEALTNLIPPTANITQLKSGFQQRGLSVKDLVVLSGGHTLGTSHCSSFSSRLYNFTGKGDTDPDLDPKYIAKLKNKCKQGDANSLVEMDPGSFKTFDESYYTLVGKRRGLFVSDAALLDDSETKAYVKLQATTHGSTFFEDFGVSMIKMGRIGVLTGSSGEIRKECALVN
SIO_010081: LOC100262330
subclass of: SO_0000673
so part of: LOC100262330
location: complement(join(155669..156075,156162..156327,156422..156607,156701..156922))
location: region:155669-156922:-1
so has part: feature:156701-156922:-1:exon
so has part: feature:156422-156607:-1:exon
so has part: feature:156162-156327:-1:exon
so has part: feature:155669-156075:-1:exon

XP_002268360.1
type: Protein
SIO_000068: ncbiprotein

position:155669:-1
position: 155669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156922:-1
position: 156922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156701-156922:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:156422-156607:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:156162-156327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:155669-156075:-1:exon

LOC104880450
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC104880450
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 177317..180387
location: region:177317-180387:1
so has part: feature:177317-180387:1:exon
subclass of: SO_0000010

104880450
type: Gene
SIO_000068: ncbigene

position:177317:1
position: 177317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180387:1
position: 180387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177317-180387:1:exon

LOC104880450
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104880450
product: uncharacterized LOC104880450, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 122 samples with support for all annotated introns
transcript id: XM_010657046.2
SIO_010081: LOC104880450
subclass of: SO_0000673
so part of: LOC104880450
location: join(177317..177708,177809..177997,178160..178354,178699..178807,179310..179553,179708..180387)
location: region:177317-180387:1
so has part: feature:177317-177708:1:exon
so has part: feature:177809-177997:1:exon
so has part: feature:178160-178354:1:exon
so has part: feature:178699-178807:1:exon
so has part: feature:179310-179553:1:exon
so has part: feature:179708-180387:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:177317-177708:1:exon

position:177708:1
position: 177708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:177809-177997:1:exon

position:177809:1
position: 177809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177997:1
position: 177997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:178160-178354:1:exon

position:178160:1
position: 178160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178354:1
position: 178354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:178699-178807:1:exon

position:178699:1
position: 178699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178807:1
position: 178807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:179310-179553:1:exon

position:179310:1
position: 179310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179553:1
position: 179553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:179708-180387:1:exon

position:179708:1
position: 179708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104880450
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104880450
product: uncharacterized LOC104880450, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 114 samples with support for all annotated introns
transcript id: XM_010657047.2
SIO_010081: LOC104880450
subclass of: SO_0000673
so part of: LOC104880450
location: join(177317..177613,177809..177997,178160..178354,178699..178807,179310..179553,179708..180387)
location: region:177317-180387:1
so has part: feature:177317-177613:1:exon
so has part: feature:177809-177997:1:exon
so has part: feature:178160-178354:1:exon
so has part: feature:178699-178807:1:exon
so has part: feature:179310-179553:1:exon
so has part: feature:179708-180387:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:177317-177613:1:exon

position:177613:1
position: 177613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:177809-177997:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:178160-178354:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:178699-178807:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:179310-179553:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:179708-180387:1:exon

LOC104880450
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104880450
product: uncharacterized LOC104880450, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 198 samples with support for all annotated introns
transcript id: XM_010657048.2
SIO_010081: LOC104880450
subclass of: SO_0000673
so part of: LOC104880450
location: join(177320..177708,177809..177982,178160..178354,178699..178807,179310..179553,179708..180387)
location: region:177320-180387:1
so has part: feature:177320-177708:1:exon
so has part: feature:177809-177982:1:exon
so has part: feature:178160-178354:1:exon
so has part: feature:178699-178807:1:exon
so has part: feature:179310-179553:1:exon
so has part: feature:179708-180387:1:exon

position:177320:1
position: 177320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177320-177708:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:177809-177982:1:exon

position:177982:1
position: 177982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:178160-178354:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:178699-178807:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:179310-179553:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:179708-180387:1:exon

LOC104880450
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104880450
product: uncharacterized LOC104880450, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_010657049.2
SIO_010081: LOC104880450
subclass of: SO_0000673
so part of: LOC104880450
location: join(177321..177708,177809..178023,178160..178354,178699..178807,179310..179553,179708..180387)
location: region:177321-180387:1
so has part: feature:177321-177708:1:exon
so has part: feature:177809-178023:1:exon
so has part: feature:178160-178354:1:exon
so has part: feature:178699-178807:1:exon
so has part: feature:179310-179553:1:exon
so has part: feature:179708-180387:1:exon

position:177321:1
position: 177321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177321-177708:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:177809-178023:1:exon

position:178023:1
position: 178023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:178160-178354:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:178699-178807:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:179310-179553:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:179708-180387:1:exon

LOC104880450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104880450
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC104880450 isoform X1
translation: MKMAENPKLVSAFFNSGLSTSNSSSEDCGMKEKETQKILVSDQVNGFQYKTEKSDSFVVDMEGFPNGVNKDTTANSRITLQRSLSRKGSQRGGEKKPNSVASIDADAVLATSSPRAALAGGSTLEKPVAVVVAAAAAGGTIDHHPVGSQVHHHIAITAGNISTITESRFISRRYSFRRASPSWLIDPRRILFFFATLSSMGTILLIYFTLSIKRLGGDDTELDWQQ
SIO_010081: LOC104880450
subclass of: SO_0000673
so part of: LOC104880450
location: join(177956..177997,178160..178354,178699..178807,179310..179553,179708..179798)
location: region:177956-179798:1
so has part: feature:177956-177997:1:exon
so has part: feature:178160-178354:1:exon
so has part: feature:178699-178807:1:exon
so has part: feature:179310-179553:1:exon
so has part: feature:179708-179798:1:exon

XP_010655348.1
type: Protein
SIO_000068: ncbiprotein

position:177956:1
position: 177956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179798:1
position: 179798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177956-177997:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:178160-178354:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:178699-178807:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:179310-179553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:179708-179798:1:exon

LOC104880450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104880450
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC104880450 isoform X1
translation: MKMAENPKLVSAFFNSGLSTSNSSSEDCGMKEKETQKILVSDQVNGFQYKTEKSDSFVVDMEGFPNGVNKDTTANSRITLQRSLSRKGSQRGGEKKPNSVASIDADAVLATSSPRAALAGGSTLEKPVAVVVAAAAAGGTIDHHPVGSQVHHHIAITAGNISTITESRFISRRYSFRRASPSWLIDPRRILFFFATLSSMGTILLIYFTLSIKRLGGDDTELDWQQ
SIO_010081: LOC104880450
subclass of: SO_0000673
so part of: LOC104880450
location: join(177956..177997,178160..178354,178699..178807,179310..179553,179708..179798)
location: region:177956-179798:1
so has part: feature:177956-177997:1:exon
so has part: feature:178160-178354:1:exon
so has part: feature:178699-178807:1:exon
so has part: feature:179310-179553:1:exon
so has part: feature:179708-179798:1:exon

XP_010655349.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:177956-177997:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:178160-178354:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:178699-178807:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:179310-179553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:179708-179798:1:exon

LOC104880450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104880450
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC104880450 isoform X2
translation: MKMAENPKLNSGLSTSNSSSEDCGMKEKETQKILVSDQVNGFQYKTEKSDSFVVDMEGFPNGVNKDTTANSRITLQRSLSRKGSQRGGEKKPNSVASIDADAVLATSSPRAALAGGSTLEKPVAVVVAAAAAGGTIDHHPVGSQVHHHIAITAGNISTITESRFISRRYSFRRASPSWLIDPRRILFFFATLSSMGTILLIYFTLSIKRLGGDDTELDWQQ
SIO_010081: LOC104880450
subclass of: SO_0000673
so part of: LOC104880450
location: join(177956..177982,178160..178354,178699..178807,179310..179553,179708..179798)
location: region:177956-179798:1
so has part: feature:177956-177982:1:exon
so has part: feature:178160-178354:1:exon
so has part: feature:178699-178807:1:exon
so has part: feature:179310-179553:1:exon
so has part: feature:179708-179798:1:exon

XP_010655350.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:177956-177982:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:178160-178354:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:178699-178807:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:179310-179553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:179708-179798:1:exon

LOC104880450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104880450
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC104880450 isoform X3
translation: MKEKETQKILVSDQVNGFQYKTEKSDSFVVDMEGFPNGVNKDTTANSRITLQRSLSRKGSQRGGEKKPNSVASIDADAVLATSSPRAALAGGSTLEKPVAVVVAAAAAGGTIDHHPVGSQVHHHIAITAGNISTITESRFISRRYSFRRASPSWLIDPRRILFFFATLSSMGTILLIYFTLSIKRLGGDDTELDWQQ
SIO_010081: LOC104880450
subclass of: SO_0000673
so part of: LOC104880450
location: join(178205..178354,178699..178807,179310..179553,179708..179798)
location: region:178205-179798:1
so has part: feature:178205-178354:1:exon
so has part: feature:178699-178807:1:exon
so has part: feature:179310-179553:1:exon
so has part: feature:179708-179798:1:exon

XP_010655351.1
type: Protein
SIO_000068: ncbiprotein

position:178205:1
position: 178205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178205-178354:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:178699-178807:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:179310-179553:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:179708-179798:1:exon

LOC100267490
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100267490
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(180111..184764)
location: region:180111-184764:-1
so has part: feature:180111-184764:-1:exon
subclass of: SO_0000010

100267490
type: Gene
SIO_000068: ncbigene

position:180111:-1
position: 180111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184764:-1
position: 184764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180111-184764:-1:exon

LOC100267490
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 29760
gene: LOC100267490
product: pyruvate, phosphate dikinase regulatory protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XR_786695.2
SIO_010081: LOC100267490
so part of: LOC100267490
location: complement(join(180111..180504,182001..182254,182442..183081,184021..184764))
location: region:180111-184764:-1
so has part: feature:184021-184764:-1:exon
so has part: feature:182442-183081:-1:exon
so has part: feature:182001-182254:-1:exon
so has part: feature:180111-180504:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:184021-184764:-1:exon

position:184021:-1
position: 184021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:182442-183081:-1:exon

position:182442:-1
position: 182442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183081:-1
position: 183081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:182001-182254:-1:exon

position:182001:-1
position: 182001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182254:-1
position: 182254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:180111-180504:-1:exon

position:180504:-1
position: 180504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100267490
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 29760
gene: LOC100267490
product: pyruvate, phosphate dikinase regulatory protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 123 samples with support for all annotated introns
transcript id: XR_786694.2
SIO_010081: LOC100267490
so part of: LOC100267490
location: complement(join(180111..180509,182001..182254,182442..183081,184021..184764))
location: region:180111-184764:-1
so has part: feature:184021-184764:-1:exon
so has part: feature:182442-183081:-1:exon
so has part: feature:182001-182254:-1:exon
so has part: feature:180111-180509:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:184021-184764:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:182442-183081:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:182001-182254:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:180111-180509:-1:exon

position:180509:-1
position: 180509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100267490
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100267490
product: pyruvate, phosphate dikinase regulatory protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 248 samples with support for all annotated introns
transcript id: XM_002268212.4
SIO_010081: LOC100267490
subclass of: SO_0000673
so part of: LOC100267490
location: complement(join(181798..182254,182442..183081,184021..184764))
location: region:181798-184764:-1
so has part: feature:184021-184764:-1:exon
so has part: feature:182442-183081:-1:exon
so has part: feature:181798-182254:-1:exon

position:181798:-1
position: 181798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184021-184764:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:182442-183081:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181798-182254:-1:exon

LOC100267490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100267490
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyruvate, phosphate dikinase regulatory protein 2
translation: MNSQFSQHSISQIYFIIKKKMMASTAVSFSSHRPTAASTTNYPKPNPTNPISLPNSQANRAPSDSDPPKFKGSPQLNRWSRARAIRSGRKLERQGQRSQVVEMNSRVQPKESVSSPPTSASGAPGNDDGEVRTGKSIYMVSDGTGWTVEHAVNAALGQFEHCLVDRGCPVNTHLFSGIDDAEPLVEIVKQAAKEGAMLVYTLADPSMAESARQACKLWGIPSTDVLGPITEAVASHLGVSPSGLPRGAPGRKFPLSEEYFKRIEAIEFTIKQDDGALPQNLHKAEIVLAGVSRTGKTPLSIYLAQKGYKVANVPIVIGVELPNTLFEVEPEKVFGLTINPVVLHTIRKARAKSLGFCEEIRSNYSEMDHVRAELEFAGKIFAQNPAWPVIEVTGKAIEETAAVVLRLYHDRKHKCSMPRISKRY
SIO_010081: LOC100267490
subclass of: SO_0000673
so part of: LOC100267490
location: complement(join(182151..182254,182442..183081,184021..184551))
location: region:182151-184551:-1
so has part: feature:184021-184551:-1:exon
so has part: feature:182442-183081:-1:exon
so has part: feature:182151-182254:-1:exon

XP_002268248.1
type: Protein
SIO_000068: ncbiprotein

position:182151:-1
position: 182151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184551:-1
position: 184551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184021-184551:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:182442-183081:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:182151-182254:-1:exon

LOC100245189
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100245189
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(190026..195189)
location: region:190026-195189:-1
so has part: feature:190026-195189:-1:exon
subclass of: SO_0000010

100245189
type: Gene
SIO_000068: ncbigene

position:190026:-1
position: 190026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195189:-1
position: 195189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190026-195189:-1:exon

LOC100245189
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100245189
product: gibberellin 2-beta-dioxygenase 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 14 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 160 samples with support for all annotated introns
transcript id: XM_002268137.3
SIO_010081: LOC100245189
subclass of: SO_0000673
so part of: LOC100245189
location: complement(join(190026..190589,190668..190986,192666..193129,194836..195189))
location: region:190026-195189:-1
so has part: feature:194836-195189:-1:exon
so has part: feature:192666-193129:-1:exon
so has part: feature:190668-190986:-1:exon
so has part: feature:190026-190589:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:194836-195189:-1:exon

position:194836:-1
position: 194836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:192666-193129:-1:exon

position:192666:-1
position: 192666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193129:-1
position: 193129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:190668-190986:-1:exon

position:190668:-1
position: 190668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190986:-1
position: 190986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:190026-190589:-1:exon

position:190589:-1
position: 190589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100245189
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100245189
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gibberellin 2-beta-dioxygenase 8
translation: MPFLQYKYHTPHPTFLLEHSSPLSLNPTPFSSGFSAHSLSFRHFTYRYFHILFPTKLSVEPLAQHLQVVVHWCLKEEMVESDTKLPFSMDSDPPFEETYKTLFENSIEESKINRANQILITCEECELPLIDIGRLSMGELEREECKKEIARASQEWGFFQVINHGVSSEILEDMRSKQMQVFKQPFRLKTNHQYLNLSAGCYRWGTPTATCLSQLSWSEAFHIPLMDISSSGGLPTTLSSTMGQFAATVSDLAQRLVEILAEEMGHKSTFFKEKCLPSTCYIRMNRYPPCPTSQIFGLMPHTDSDFLTILHQDQVGGLQLVKDGRWIAVKPNPEALIINIGDLFQAWSNGVYKSVQHRVVTNQKVERFSTAYFLCPSYDAVIESCVEPLLYRKFSFREFRQQVQEDVQKLGYKVGLPRFLV
SIO_010081: LOC100245189
subclass of: SO_0000673
so part of: LOC100245189
location: complement(join(190359..190589,190668..190986,192666..193129,194836..195087))
location: region:190359-195087:-1
so has part: feature:194836-195087:-1:exon
so has part: feature:192666-193129:-1:exon
so has part: feature:190668-190986:-1:exon
so has part: feature:190359-190589:-1:exon

XP_002268173.2
type: Protein
SIO_000068: ncbiprotein

position:190359:-1
position: 190359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195087:-1
position: 195087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194836-195087:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:192666-193129:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:190668-190986:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:190359-190589:-1:exon

LOC100241937
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100241937
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 204993..208269
location: region:204993-208269:1
so has part: feature:204993-208269:1:exon
subclass of: SO_0000010

100241937
type: Gene
SIO_000068: ncbigene

position:204993:1
position: 204993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208269:1
position: 208269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204993-208269:1:exon

LOC100241937
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100241937
product: chaperone protein dnaJ 50
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 238 samples with support for all annotated introns
transcript id: XM_002265079.4
SIO_010081: LOC100241937
subclass of: SO_0000673
so part of: LOC100241937
location: join(204993..205192,205289..205351,205431..205497,205885..205944,206114..206164,206256..206336,206663..206775,207024..207141,207240..207366,207831..208269)
location: region:204993-208269:1
so has part: feature:204993-205192:1:exon
so has part: feature:205289-205351:1:exon
so has part: feature:205431-205497:1:exon
so has part: feature:205885-205944:1:exon
so has part: feature:206114-206164:1:exon
so has part: feature:206256-206336:1:exon
so has part: feature:206663-206775:1:exon
so has part: feature:207024-207141:1:exon
so has part: feature:207240-207366:1:exon
so has part: feature:207831-208269:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:204993-205192:1:exon

position:205192:1
position: 205192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:205289-205351:1:exon

position:205289:1
position: 205289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205351:1
position: 205351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:205431-205497:1:exon

position:205431:1
position: 205431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205497:1
position: 205497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:205885-205944:1:exon

position:205885:1
position: 205885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205944:1
position: 205944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:206114-206164:1:exon

position:206114:1
position: 206114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206164:1
position: 206164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:206256-206336:1:exon

position:206256:1
position: 206256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206336:1
position: 206336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:206663-206775:1:exon

position:206663:1
position: 206663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206775:1
position: 206775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:207024-207141:1:exon

position:207024:1
position: 207024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207141:1
position: 207141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:207240-207366:1:exon

position:207240:1
position: 207240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207366:1
position: 207366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:207831-208269:1:exon

position:207831:1
position: 207831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100241937
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100241937
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chaperone protein dnaJ 50
translation: MAPAGTLWWGLIFLLMISPSMAIYCDEDDCYDLLGVSQSANASEIKKAYYKLSLKYHPDKNPDPESRKLFVKIANAYEILKDEATREQYDYAIAHPEEVFYNAARYYHAYYGHKTDPRAVLVGLLLVLSAFQYLNQWTRYTQAVDMVKKTPAYKNRLWALELERTGGATNKKKSHKQMDKKMEEELSKELELQIKGAEKPSIWELIGVRFVLLPYTIGKVLLWHGFWFWRYKVKQAPYSWEDASYLTRKSLRVPFDAWRNIDESTKEDLLQRRLWEKSNLEKYLAELRKDSKRRR
SIO_010081: LOC100241937
subclass of: SO_0000673
so part of: LOC100241937
location: join(205089..205192,205289..205351,205431..205497,205885..205944,206114..206164,206256..206336,206663..206775,207024..207141,207240..207366,207831..207934)
location: region:205089-207934:1
so has part: feature:205089-205192:1:exon
so has part: feature:205289-205351:1:exon
so has part: feature:205431-205497:1:exon
so has part: feature:205885-205944:1:exon
so has part: feature:206114-206164:1:exon
so has part: feature:206256-206336:1:exon
so has part: feature:206663-206775:1:exon
so has part: feature:207024-207141:1:exon
so has part: feature:207240-207366:1:exon
so has part: feature:207831-207934:1:exon

XP_002265115.2
type: Protein
SIO_000068: ncbiprotein

position:205089:1
position: 205089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207934:1
position: 207934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205089-205192:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205289-205351:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:205431-205497:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:205885-205944:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206114-206164:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206256-206336:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:206663-206775:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:207024-207141:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:207240-207366:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:207831-207934:1:exon

LOC100247070
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100247070
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 208688..220313
location: region:208688-220313:1
so has part: feature:208688-220313:1:exon
subclass of: SO_0000010

100247070
type: Gene
SIO_000068: ncbigene

position:208688:1
position: 208688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220313:1
position: 220313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208688-220313:1:exon

LOC100247070
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 29760
gene: LOC100247070
product: tyrosyl-DNA phosphodiesterase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XR_002031037.1
SIO_010081: LOC100247070
so part of: LOC100247070
location: join(208688..208999,209090..209269,209347..209610,209881..210111,210494..210554,210953..211029,211194..211451,212328..212417,213315..213449,215876..216025,217065..217168,217728..217781,217910..218000,218926..219003,219100..219250,219331..219537,220272..220313)
location: region:208688-220313:1
so has part: feature:208688-208999:1:exon
so has part: feature:209090-209269:1:exon
so has part: feature:209347-209610:1:exon
so has part: feature:209881-210111:1:exon
so has part: feature:210494-210554:1:exon
so has part: feature:210953-211029:1:exon
so has part: feature:211194-211451:1:exon
so has part: feature:212328-212417:1:exon
so has part: feature:213315-213449:1:exon
so has part: feature:215876-216025:1:exon
so has part: feature:217065-217168:1:exon
so has part: feature:217728-217781:1:exon
so has part: feature:217910-218000:1:exon
so has part: feature:218926-219003:1:exon
so has part: feature:219100-219250:1:exon
so has part: feature:219331-219537:1:exon
so has part: feature:220272-220313:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:208688-208999:1:exon

position:208999:1
position: 208999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:209090-209269:1:exon

position:209090:1
position: 209090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209269:1
position: 209269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:209347-209610:1:exon

position:209347:1
position: 209347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209610:1
position: 209610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:209881-210111:1:exon

position:209881:1
position: 209881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210111:1
position: 210111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:210494-210554:1:exon

position:210494:1
position: 210494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210554:1
position: 210554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:210953-211029:1:exon

position:210953:1
position: 210953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211029:1
position: 211029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:211194-211451:1:exon

position:211194:1
position: 211194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211451:1
position: 211451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:212328-212417:1:exon

position:212328:1
position: 212328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212417:1
position: 212417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:213315-213449:1:exon

position:213315:1
position: 213315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213449:1
position: 213449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:215876-216025:1:exon

position:215876:1
position: 215876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216025:1
position: 216025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:217065-217168:1:exon

position:217065:1
position: 217065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217168:1
position: 217168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:217728-217781:1:exon

position:217728:1
position: 217728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217781:1
position: 217781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:217910-218000:1:exon

position:217910:1
position: 217910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218000:1
position: 218000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:218926-219003:1:exon

position:218926:1
position: 218926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219003:1
position: 219003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:219100-219250:1:exon

position:219100:1
position: 219100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219250:1
position: 219250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:219331-219537:1:exon

position:219331:1
position: 219331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219537:1
position: 219537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:220272-220313:1:exon

position:220272:1
position: 220272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100247070
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100247070
product: tyrosyl-DNA phosphodiesterase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 158 samples with support for all annotated introns
transcript id: XM_010657050.2
SIO_010081: LOC100247070
subclass of: SO_0000673
so part of: LOC100247070
location: join(208688..208999,209090..209269,209347..209610,209881..210111,210494..210554,210953..211029,211194..211451,212328..212417,213315..213449,215876..216025,217065..217168,217728..217781,217910..218000,218926..219003,219100..219250,219331..219574)
location: region:208688-219574:1
so has part: feature:208688-208999:1:exon
so has part: feature:209090-209269:1:exon
so has part: feature:209347-209610:1:exon
so has part: feature:209881-210111:1:exon
so has part: feature:210494-210554:1:exon
so has part: feature:210953-211029:1:exon
so has part: feature:211194-211451:1:exon
so has part: feature:212328-212417:1:exon
so has part: feature:213315-213449:1:exon
so has part: feature:215876-216025:1:exon
so has part: feature:217065-217168:1:exon
so has part: feature:217728-217781:1:exon
so has part: feature:217910-218000:1:exon
so has part: feature:218926-219003:1:exon
so has part: feature:219100-219250:1:exon
so has part: feature:219331-219574:1:exon

position:219574:1
position: 219574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208688-208999:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209090-209269:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209347-209610:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209881-210111:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:210494-210554:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:210953-211029:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:211194-211451:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:212328-212417:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:213315-213449:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:215876-216025:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:217065-217168:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:217728-217781:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:217910-218000:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:218926-219003:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:219100-219250:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:219331-219574:1:exon

LOC100247070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100247070
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosyl-DNA phosphodiesterase 1 isoform X1
translation: MSLSQIGFLVPLNRNLEEDTSTPKLPIPTGANVIGRNSISVSDKRLSRKHLTLIASGNGSVDAVVEGTNPVVVASGNQRKKLRTGEKAVITNDDIIELIPGHYFFKYVTVAGEKCEKKGNSMDAQNMESNEVSLSRKRMRQVSEDEAFARKLQAEMENDVLVQERSLVTGKSGYSQASTASIPSSHMNSEAIRHFSIPKDNLPLTYRLLRVKDLPAWANTSSVSIRDVIQGDVLIAVLSNYMVDIDWLLSSCPTLAKIPHVLVIHGEGDGTLDHMKKNKPPNWILHKPPLPISFGTHHSKAMLLVYPRGVRVIVHTANLIYVDWNNKSQGLWMQDFPWKVQKELSKGCAFENDLIDYLSVLKWPEFTANLPALGSFNINSSFFKKFDYSNAVVRLIASVPGYHTGSNLKKWGHMKLCSVLQECIFDKEFQKSPLAYQFSSLGSLDEKWMTELASSMSSGSCDDKTPLGLGKPLIIWPTVEDVRCSLEGYAAGNAIPSPQKNVEKEFLKKYWAKWKATHTGRCRAMPHIKTYTRYNGQNLAWFLLTSANLSKAAWGALQKNNSQLMIRSYELGVLFLPSPINRGQGFSCTDNGSPSKNKCGLSENTKSQRTKLVTLTWEGNRSSDSSSEVIPLPVPYELPPKQYSSEDVPWSWDRRYYKKDVCGQVWPRHVQLYSSPDS
SIO_010081: LOC100247070
subclass of: SO_0000673
so part of: LOC100247070
location: join(208985..208999,209090..209269,209347..209610,209881..210111,210494..210554,210953..211029,211194..211451,212328..212417,213315..213449,215876..216025,217065..217168,217728..217781,217910..218000,218926..219003,219100..219250,219331..219428)
location: region:208985-219428:1
so has part: feature:208985-208999:1:exon
so has part: feature:209090-209269:1:exon
so has part: feature:209347-209610:1:exon
so has part: feature:209881-210111:1:exon
so has part: feature:210494-210554:1:exon
so has part: feature:210953-211029:1:exon
so has part: feature:211194-211451:1:exon
so has part: feature:212328-212417:1:exon
so has part: feature:213315-213449:1:exon
so has part: feature:215876-216025:1:exon
so has part: feature:217065-217168:1:exon
so has part: feature:217728-217781:1:exon
so has part: feature:217910-218000:1:exon
so has part: feature:218926-219003:1:exon
so has part: feature:219100-219250:1:exon
so has part: feature:219331-219428:1:exon

XP_010655352.1
type: Protein
SIO_000068: ncbiprotein

position:208985:1
position: 208985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219428:1
position: 219428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208985-208999:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209090-209269:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209347-209610:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209881-210111:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:210494-210554:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:210953-211029:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:211194-211451:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:212328-212417:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:213315-213449:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:215876-216025:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:217065-217168:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:217728-217781:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:217910-218000:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:218926-219003:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:219100-219250:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:219331-219428:1:exon

LOC100247070
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100247070
product: tyrosyl-DNA phosphodiesterase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_019222678.1
SIO_010081: LOC100247070
subclass of: SO_0000673
so part of: LOC100247070
location: join(209171..209269,209337..209610,209881..210111,210494..210554,210953..211029,211194..211451,212328..212417,213315..213449,215876..216025,217065..217168,217728..217781,217910..218000,218926..219003,219100..219250,219331..219574)
location: region:209171-219574:1
so has part: feature:209171-209269:1:exon
so has part: feature:209337-209610:1:exon
so has part: feature:209881-210111:1:exon
so has part: feature:210494-210554:1:exon
so has part: feature:210953-211029:1:exon
so has part: feature:211194-211451:1:exon
so has part: feature:212328-212417:1:exon
so has part: feature:213315-213449:1:exon
so has part: feature:215876-216025:1:exon
so has part: feature:217065-217168:1:exon
so has part: feature:217728-217781:1:exon
so has part: feature:217910-218000:1:exon
so has part: feature:218926-219003:1:exon
so has part: feature:219100-219250:1:exon
so has part: feature:219331-219574:1:exon

position:209171:1
position: 209171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209171-209269:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209337-209610:1:exon

position:209337:1
position: 209337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:209881-210111:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:210494-210554:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:210953-211029:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:211194-211451:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:212328-212417:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:213315-213449:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:215876-216025:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:217065-217168:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:217728-217781:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:217910-218000:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:218926-219003:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:219100-219250:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:219331-219574:1:exon

LOC100247070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100247070
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosyl-DNA phosphodiesterase 1 isoform X2
translation: MDAQNMESNEVSLSRKRMRQVSEDEAFARKLQAEMENDVLVQERSLVTGKSGYSQASTASIPSSHMNSEAIRHFSIPKDNLPLTYRLLRVKDLPAWANTSSVSIRDVIQGDVLIAVLSNYMVDIDWLLSSCPTLAKIPHVLVIHGEGDGTLDHMKKNKPPNWILHKPPLPISFGTHHSKAMLLVYPRGVRVIVHTANLIYVDWNNKSQGLWMQDFPWKVQKELSKGCAFENDLIDYLSVLKWPEFTANLPALGSFNINSSFFKKFDYSNAVVRLIASVPGYHTGSNLKKWGHMKLCSVLQECIFDKEFQKSPLAYQFSSLGSLDEKWMTELASSMSSGSCDDKTPLGLGKPLIIWPTVEDVRCSLEGYAAGNAIPSPQKNVEKEFLKKYWAKWKATHTGRCRAMPHIKTYTRYNGQNLAWFLLTSANLSKAAWGALQKNNSQLMIRSYELGVLFLPSPINRGQGFSCTDNGSPSKNKCGLSENTKSQRTKLVTLTWEGNRSSDSSSEVIPLPVPYELPPKQYSSEDVPWSWDRRYYKKDVCGQVWPRHVQLYSSPDS
SIO_010081: LOC100247070
subclass of: SO_0000673
so part of: LOC100247070
location: join(209515..209610,209881..210111,210494..210554,210953..211029,211194..211451,212328..212417,213315..213449,215876..216025,217065..217168,217728..217781,217910..218000,218926..219003,219100..219250,219331..219428)
location: region:209515-219428:1
so has part: feature:209515-209610:1:exon
so has part: feature:209881-210111:1:exon
so has part: feature:210494-210554:1:exon
so has part: feature:210953-211029:1:exon
so has part: feature:211194-211451:1:exon
so has part: feature:212328-212417:1:exon
so has part: feature:213315-213449:1:exon
so has part: feature:215876-216025:1:exon
so has part: feature:217065-217168:1:exon
so has part: feature:217728-217781:1:exon
so has part: feature:217910-218000:1:exon
so has part: feature:218926-219003:1:exon
so has part: feature:219100-219250:1:exon
so has part: feature:219331-219428:1:exon

XP_019078223.1
type: Protein
SIO_000068: ncbiprotein

position:209515:1
position: 209515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209515-209610:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209881-210111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:210494-210554:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:210953-211029:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:211194-211451:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:212328-212417:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:213315-213449:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:215876-216025:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:217065-217168:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:217728-217781:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:217910-218000:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:218926-219003:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:219100-219250:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:219331-219428:1:exon

LOC100252194
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100252194
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 220731..222269
location: region:220731-222269:1
so has part: feature:220731-222269:1:exon
subclass of: SO_0000010

100252194
type: Gene
SIO_000068: ncbigene

position:220731:1
position: 220731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222269:1
position: 222269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220731-222269:1:exon

LOC100252194
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100252194
product: polyubiquitin-C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_002264996.3
SIO_010081: LOC100252194
subclass of: SO_0000673
so part of: LOC100252194
location: 220731..222269
location: region:220731-222269:1
so has part: feature:220731-222269:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:220731-222269:1:exon

LOC100252194
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100252194
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyubiquitin-C
translation: MDVIFEPQGGEPFSLELGFFDTVLEIKEKVQKYHGIPASRQTLFFNGHLLQDNRDIPSMQMFYNCRIQMIISPDPPSEMPPPLINIEDSPPPNNLQEDPSPPPPPPLPPPPPSTKIQILLRIPTSKIHLSIEMDLAHTVGRLKEKIHEMEGIPVNRMVLYWRGRELQDSRSLRDCELSDRSEIDVGIKPLPAASGSGSKRLKLMVMSKCGTKKVPVEVNPLDNVGELRKELEKLDQRFQFHLPPEGYFFIYKQNVMDDDRSFRWHHVGQGDTVEIFNGCVTGGS
SIO_010081: LOC100252194
subclass of: SO_0000673
so part of: LOC100252194
location: 221185..222039
location: region:221185-222039:1
so has part: feature:221185-222039:1:exon

XP_002265032.1
type: Protein
SIO_000068: ncbiprotein

position:221185:1
position: 221185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222039:1
position: 222039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221185-222039:1:exon

LOC100250308
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100250308
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 222754..224687
location: region:222754-224687:1
so has part: feature:222754-224687:1:exon
subclass of: SO_0000010

100250308
type: Gene
SIO_000068: ncbigene

position:222754:1
position: 222754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224687:1
position: 224687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222754-224687:1:exon

LOC100250308
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100250308
product: probable serine/threonine-protein kinase WNK4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_002267779.3
SIO_010081: LOC100250308
subclass of: SO_0000673
so part of: LOC100250308
location: 222754..224687
location: region:222754-224687:1
so has part: feature:222754-224687:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:222754-224687:1:exon

LOC100250308
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100250308
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable serine/threonine-protein kinase WNK4
translation: MESAEDFVEKDPSGRYVRYNEFLGKGAFKTVYKGFDEDDGTEVAWCQVDIDDVLQSPEEVQRSLYSEVNLIKSLKHENIIKCYNSWVNDEKKTINIITELFTSGSLRQYRKKHKNVDLKAIKNWSRQILRGLHYLHTHNPPIIHRDLKCDNIFVNGFNGQVKIGDLGLAIVMQQPFARSCIGTPEFMAPELYDEEYNELVDIYSFGMCVLEMVTGEYPYSECTNPAQIFKKVTSGVKPAALSRVGDPQVKQFIEKCLVPASLRLSAEELLKDPFLASENSKDRVCNTLLLSNFMPKVMSSPKPQSCVSTNNLASESSEELVCNPLQLSHLVPKSMNSAKLQLLTLQMDPDWQKLLVGMRNRSLSIISSFALAKKGLKLDLDAVHMQNQQCLSQLLRQREEVAEDAKGRWIIKKIPVI
SIO_010081: LOC100250308
subclass of: SO_0000673
so part of: LOC100250308
location: 223065..224318
location: region:223065-224318:1
so has part: feature:223065-224318:1:exon

XP_002267815.1
type: Protein
SIO_000068: ncbiprotein

position:223065:1
position: 223065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224318:1
position: 224318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223065-224318:1:exon

THI1-2
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: THI1-2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 227209..242227
location: region:227209-242227:1
so has part: feature:227209-242227:1:exon
subclass of: SO_0000010

100265774
type: Gene
SIO_000068: ncbigene

position:227209:1
position: 227209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242227:1
position: 242227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227209-242227:1:exon

THI1-2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: THI1-2
product: thiamine thiazole synthase 2, chloroplastic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 68 mRNAs, 234 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_002267378.4
SIO_010081: THI1-2
subclass of: SO_0000673
so part of: THI1-2
location: join(227209..227219,231394..231399,233960..233966,240797..241721,241842..242227)
location: region:227209-242227:1
so has part: feature:227209-227219:1:exon
so has part: feature:231394-231399:1:exon
so has part: feature:233960-233966:1:exon
so has part: feature:240797-241721:1:exon
so has part: feature:241842-242227:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:227209-227219:1:exon

position:227219:1
position: 227219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:231394-231399:1:exon

position:231394:1
position: 231394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231399:1
position: 231399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:233960-233966:1:exon

position:233960:1
position: 233960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233966:1
position: 233966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:240797-241721:1:exon

position:240797:1
position: 240797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241721:1
position: 241721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:241842-242227:1:exon

position:241842:1
position: 241842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100255488
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100255488
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 229482..230642
location: region:229482-230642:1
so has part: feature:229482-230642:1:exon
subclass of: SO_0000010

100255488
type: Gene
SIO_000068: ncbigene

position:229482:1
position: 229482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230642:1
position: 230642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229482-230642:1:exon

LOC100255488
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100255488
product: MYB-like transcription factor ETC1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 244 samples with support for all annotated introns
transcript id: XM_002267633.3
SIO_010081: LOC100255488
subclass of: SO_0000673
so part of: LOC100255488
location: join(229482..229852,230087..230171,230275..230642)
location: region:229482-230642:1
so has part: feature:229482-229852:1:exon
so has part: feature:230087-230171:1:exon
so has part: feature:230275-230642:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:229482-229852:1:exon

position:229852:1
position: 229852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:230087-230171:1:exon

position:230087:1
position: 230087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230171:1
position: 230171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:230275-230642:1:exon

position:230275:1
position: 230275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100255488
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100255488
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MYB-like transcription factor ETC1
translation: MADSEYSTSNDTSCVDSQEQSSQEAKLEFSEDEETLIIRMFNLVGERWALIAGRIPGRTAEDIEKYWNSRYSTSE
SIO_010081: LOC100255488
subclass of: SO_0000673
so part of: LOC100255488
location: join(229798..229852,230087..230171,230275..230362)
location: region:229798-230362:1
so has part: feature:229798-229852:1:exon
so has part: feature:230087-230171:1:exon
so has part: feature:230275-230362:1:exon

XP_002267669.1
type: Protein
SIO_000068: ncbiprotein

position:229798:1
position: 229798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230362:1
position: 230362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229798-229852:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:230087-230171:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:230275-230362:1:exon

LOC100260561
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100260561
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(231907..235575)
location: region:231907-235575:-1
so has part: feature:231907-235575:-1:exon
subclass of: SO_0000010

100260561
type: Gene
SIO_000068: ncbigene

position:231907:-1
position: 231907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235575:-1
position: 235575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231907-235575:-1:exon

LOC100260561
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100260561
product: cysteine-rich PDZ-binding protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 248 samples with support for all annotated introns
transcript id: XM_002267503.3
SIO_010081: LOC100260561
subclass of: SO_0000673
so part of: LOC100260561
location: complement(join(231907..232220,232308..232399,235235..235352,235442..235575))
location: region:231907-235575:-1
so has part: feature:235442-235575:-1:exon
so has part: feature:235235-235352:-1:exon
so has part: feature:232308-232399:-1:exon
so has part: feature:231907-232220:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:235442-235575:-1:exon

position:235442:-1
position: 235442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:235235-235352:-1:exon

position:235235:-1
position: 235235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235352:-1
position: 235352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:232308-232399:-1:exon

position:232308:-1
position: 232308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232399:-1
position: 232399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:231907-232220:-1:exon

position:232220:-1
position: 232220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100260561
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100260561
product: cysteine-rich PDZ-binding protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 115 samples with support for all annotated introns
transcript id: XM_019222589.1
SIO_010081: LOC100260561
subclass of: SO_0000673
so part of: LOC100260561
location: complement(join(231907..232236,232308..232399,235235..235352,235442..235575))
location: region:231907-235575:-1
so has part: feature:235442-235575:-1:exon
so has part: feature:235235-235352:-1:exon
so has part: feature:232308-232399:-1:exon
so has part: feature:231907-232236:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:235442-235575:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:235235-235352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:232308-232399:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:231907-232236:-1:exon

position:232236:-1
position: 232236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100260561
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100260561
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine-rich PDZ-binding protein isoform X1
translation: MVCDKCEKKLSKVIVPDKWKEGASNTTEGGGRKINENKLLSKKNRWTPYGTTKCIICKQQVHQDAKYCHTCAYTKGVCAMCGKQVLDTKLYKQSNV
SIO_010081: LOC100260561
subclass of: SO_0000673
so part of: LOC100260561
location: complement(join(232156..232220,232308..232399,235235..235352,235442..235457))
location: region:232156-235457:-1
so has part: feature:235442-235457:-1:exon
so has part: feature:235235-235352:-1:exon
so has part: feature:232308-232399:-1:exon
so has part: feature:232156-232220:-1:exon

XP_002267539.1
type: Protein
SIO_000068: ncbiprotein

position:232156:-1
position: 232156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235457:-1
position: 235457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235442-235457:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:235235-235352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:232308-232399:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:232156-232220:-1:exon

LOC100260561
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100260561
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine-rich PDZ-binding protein isoform X2
translation: MVCDKCEKKLSKVIVPDKWKEGASNTTEGGGRKINENKLLSKKNRWTPYGTTKCIICKQQVHQDAKYCHTCAYTKALLLCRSVCNVWEASAGHQVV
SIO_010081: LOC100260561
subclass of: SO_0000673
so part of: LOC100260561
location: complement(join(232172..232236,232308..232399,235235..235352,235442..235457))
location: region:232172-235457:-1
so has part: feature:235442-235457:-1:exon
so has part: feature:235235-235352:-1:exon
so has part: feature:232308-232399:-1:exon
so has part: feature:232172-232236:-1:exon

XP_019078134.1
type: Protein
SIO_000068: ncbiprotein

position:232172:-1
position: 232172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235442-235457:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:235235-235352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:232308-232399:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:232172-232236:-1:exon

LOC100257324
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100257324
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(236027..238236)
location: region:236027-238236:-1
so has part: feature:236027-238236:-1:exon
subclass of: SO_0000010

100257324
type: Gene
SIO_000068: ncbigene

position:236027:-1
position: 236027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238236:-1
position: 238236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236027-238236:-1:exon

LOC100257324
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100257324
product: probable xyloglucan endotransglucosylase/hydrolase protein 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 187 samples with support for all annotated introns
transcript id: XM_002264959.4
SIO_010081: LOC100257324
subclass of: SO_0000673
so part of: LOC100257324
location: complement(join(236027..236568,237329..237531,237647..237747,237829..238236))
location: region:236027-238236:-1
so has part: feature:237829-238236:-1:exon
so has part: feature:237647-237747:-1:exon
so has part: feature:237329-237531:-1:exon
so has part: feature:236027-236568:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:237829-238236:-1:exon

position:237829:-1
position: 237829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:237647-237747:-1:exon

position:237647:-1
position: 237647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237747:-1
position: 237747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:237329-237531:-1:exon

position:237329:-1
position: 237329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237531:-1
position: 237531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:236027-236568:-1:exon

position:236568:-1
position: 236568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100257324
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100257324
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable xyloglucan endotransglucosylase/hydrolase protein 8
translation: MELQASPVPILLCIAALMAASCPPSQAEGQSKSSFEDSFDIMWSEDHFKTSEDGQIWYLSLDKETGCGFQTKQRYRFGWFSMKLKLVGGDSAGVVTAYYMCSENGAGPERDELDIEFLGNRSGEPYLIQTNVYKNGTGGREMRHMLWFDPTEEFHSYSILWNNEQILFVVDRVPIRVYKNNGKANNFFPNEKPMYLFSSIWNADDWATRGGMEKTDWKKAPFVSSYKDFSVDGCQWEDPYPACVSTTTQNWWDQYEAWHLSDSQKMDFAWVERNLVIYDYCKDTERYPQMLEECSLSPWD
SIO_010081: LOC100257324
subclass of: SO_0000673
so part of: LOC100257324
location: complement(join(236166..236568,237329..237531,237647..237747,237829..238024))
location: region:236166-238024:-1
so has part: feature:237829-238024:-1:exon
so has part: feature:237647-237747:-1:exon
so has part: feature:237329-237531:-1:exon
so has part: feature:236166-236568:-1:exon

XP_002264995.1
type: Protein
SIO_000068: ncbiprotein

position:236166:-1
position: 236166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238024:-1
position: 238024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237829-238024:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237647-237747:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237329-237531:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:236166-236568:-1:exon

TRNAL-UAG
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: TRNAL-UAG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 239482..239561
location: region:239482-239561:1
so has part: feature:239482-239561:1:exon
subclass of: SO_0000663

109123336
type: Gene
SIO_000068: ncbigene

position:239482:1
position: 239482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239561:1
position: 239561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239482-239561:1:exon

TRNAL-UAG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 29760
gene: TRNAL-UAG
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon UAG); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:239516..239518,aa:Leu,seq:tag)
SIO_010081: TRNAL-UAG
subclass of: SO_0000673
so part of: TRNAL-UAG
location: 239482..239561
location: region:239482-239561:1
so has part: feature:239482-239561:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:239482-239561:1:exon

THI1-2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: THI1-2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thiamine thiazole synthase 2, chloroplastic
translation: MASMATTLTSLSSNPKPAFFDNKSSFHGSPISYRVLPIKVSHQSPTISMSSVSPYDLQSFKFEPIKESIVAREMTRRYMMDMITYADTDVVIVGAGSAGLSCAYELSKNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHHFLDELGIEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKEERVAGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALRALGQPNAIDGNYTEAETMQPELILAAAETGEIVDA
SIO_010081: THI1-2
subclass of: SO_0000673
so part of: THI1-2
location: join(240822..241721,241842..242009)
location: region:240822-242009:1
so has part: feature:240822-241721:1:exon
so has part: feature:241842-242009:1:exon

XP_002267414.1
type: Protein
SIO_000068: ncbiprotein

position:240822:1
position: 240822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242009:1
position: 242009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240822-241721:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:241842-242009:1:exon

LOC100262439
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100262439
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 243103..245564
location: region:243103-245564:1
so has part: feature:243103-245564:1:exon
subclass of: SO_0000010

100262439
type: Gene
SIO_000068: ncbigene

position:243103:1
position: 243103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245564:1
position: 245564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243103-245564:1:exon

LOC100262439
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100262439
product: pentatricopeptide repeat-containing protein At4g21170, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019222587.1
SIO_010081: LOC100262439
subclass of: SO_0000673
so part of: LOC100262439
location: 243103..245564
location: region:243103-245564:1
so has part: feature:243103-245564:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:243103-245564:1:exon

LOC100262439
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100262439
product: pentatricopeptide repeat-containing protein At4g21170, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_010657052.2
SIO_010081: LOC100262439
subclass of: SO_0000673
so part of: LOC100262439
location: join(243103..243240,243309..245564)
location: region:243103-245564:1
so has part: feature:243103-243240:1:exon
so has part: feature:243309-245564:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:243103-243240:1:exon

position:243240:1
position: 243240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:243309-245564:1:exon

position:243309:1
position: 243309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100262439
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100262439
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein At4g21170 isoform X1
translation: MKKGSLINFKNGCPMPMAARTPTSPTIPQNQMPLPKPNTSFNQFSKSTTPLNWRAQIKQNQLISQISSILLQRHNWVTLLRNFNLSSKLTPSLFHQILLKTQKNPQSSLSFFNWVRTNLGFQPDLAAHSQIIRISIQSGLFQPAKGILDSLIETQKVSVLVDSVIQACRGKDSESPVLGFVLECYSSKGLFIEALEVFRRITIHGYVPSVRSCNALLDSLQRENEIKLAWCVCGALIRNGVLPDYVRIALILCKNGKLERVVRLLDMSIVCNALIYKLVIDCYCERGNFSAAFHYLNEMCNRKFDPGFCAYNSILDGACKYENDEVIQIVMGSMVEKGLLPKLLLSEYDSIIQKICNLGKTHAAQMFFKRARNEKIELDNATYGCMLRALAKDGRVKEAIGVYLVILESGVTVKDGCYHAFVNVLCEEDPSQEVSKLMGEIIGKGFSPCGSKLSKFITSLCKNGRWTEADDLLNVTIEKGLLPDSFCCSALVEHYCRSRQIDSSIALHEKIKKVKGSLDVATYNVLLNGLFMEKRIEDAVSVFDCMRSQNLLSSTSFTIMVSGLCRERELRKAMKFHDEMLKMGLKPDRATYKRLISGFK
SIO_010081: LOC100262439
subclass of: SO_0000673
so part of: LOC100262439
location: join(243152..243240,243309..245022)
location: region:243152-245022:1
so has part: feature:243152-243240:1:exon
so has part: feature:243309-245022:1:exon

XP_010655354.1
type: Protein
SIO_000068: ncbiprotein

position:243152:1
position: 243152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245022:1
position: 245022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243152-243240:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243309-245022:1:exon

LOC100262439
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100262439
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein At4g21170 isoform X2
translation: MPLPKPNTSFNQFSKSTTPLNWRAQIKQNQLISQISSILLQRHNWVTLLRNFNLSSKLTPSLFHQILLKTQKNPQSSLSFFNWVRTNLGFQPDLAAHSQIIRISIQSGLFQPAKGILDSLIETQKVSVLVDSVIQACRGKDSESPVLGFVLECYSSKGLFIEALEVFRRITIHGYVPSVRSCNALLDSLQRENEIKLAWCVCGALIRNGVLPDYVRIALILCKNGKLERVVRLLDMSIVCNALIYKLVIDCYCERGNFSAAFHYLNEMCNRKFDPGFCAYNSILDGACKYENDEVIQIVMGSMVEKGLLPKLLLSEYDSIIQKICNLGKTHAAQMFFKRARNEKIELDNATYGCMLRALAKDGRVKEAIGVYLVILESGVTVKDGCYHAFVNVLCEEDPSQEVSKLMGEIIGKGFSPCGSKLSKFITSLCKNGRWTEADDLLNVTIEKGLLPDSFCCSALVEHYCRSRQIDSSIALHEKIKKVKGSLDVATYNVLLNGLFMEKRIEDAVSVFDCMRSQNLLSSTSFTIMVSGLCRERELRKAMKFHDEMLKMGLKPDRATYKRLISGFK
SIO_010081: LOC100262439
subclass of: SO_0000673
so part of: LOC100262439
location: 243313..245022
location: region:243313-245022:1
so has part: feature:243313-245022:1:exon

XP_019078132.1
type: Protein
SIO_000068: ncbiprotein

position:243313:1
position: 243313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243313-245022:1:exon

LOC100243455
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100243455
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(249240..250527)
location: region:249240-250527:-1
so has part: feature:249240-250527:-1:exon
subclass of: SO_0000010

100243455
type: Gene
SIO_000068: ncbigene

position:249240:-1
position: 249240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250527:-1
position: 250527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249240-250527:-1:exon

LOC100243455
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100243455
product: uncharacterized LOC100243455
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 mRNAs, 178 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_002267090.4
SIO_010081: LOC100243455
subclass of: SO_0000673
so part of: LOC100243455
location: complement(249240..250527)
location: region:249240-250527:-1
so has part: feature:249240-250527:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:249240-250527:-1:exon

LOC100243455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100243455
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3B
translation: MAISEKPILLLILISLAVVFSGAESDRVAELLSLQSRSKSGVIHLDDHSLSRFLTSTTTPRPYSILIFFDATQLHDKPELNLQGLRSEFGLLASSFISNNKDSPSASKLFFCDIEFKESQSSFAQFGITSLPHIRLVGPDVKSLKDSEQMEQGDISRMADSMSDFVESRTKLSVGPIKRPPMFSKKQLGFFVAAFLVWAPFVVKKVLAGQTLLHDSKIWLGSAVFVYFFSVSGTMHNIIRKMPMFLADRNDPSKLIFFYQGSGMQLGAEGFAIGFLYTIVGLLLAFVTHVLVRVKNVTVQRVIMLFALFISFLAVKKVVSLDNWKTGYGIHAFWPSSWN
SIO_010081: LOC100243455
subclass of: SO_0000673
so part of: LOC100243455
location: complement(249477..250496)
location: region:249477-250496:-1
so has part: feature:249477-250496:-1:exon

XP_002267126.1
type: Protein
SIO_000068: ncbiprotein

position:249477:-1
position: 249477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250496:-1
position: 250496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249477-250496:-1:exon

LOC100248590
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100248590
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 254246..254986
location: region:254246-254986:1
so has part: feature:254246-254986:1:exon
subclass of: SO_0000010

100248590
type: Gene
SIO_000068: ncbigene

position:254246:1
position: 254246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254986:1
position: 254986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254246-254986:1:exon

LOC100248590
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100248590
product: nuclear transport factor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 253 samples with support for all annotated introns
transcript id: XM_002267045.3
SIO_010081: LOC100248590
subclass of: SO_0000673
so part of: LOC100248590
location: join(254246..254584,254809..254986)
location: region:254246-254986:1
so has part: feature:254246-254584:1:exon
so has part: feature:254809-254986:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:254246-254584:1:exon

position:254584:1
position: 254584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:254809-254986:1:exon

position:254809:1
position: 254809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100248590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100248590
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear transport factor 2
translation: MEEQVEGLGRAFVDHYYYLFDNDRSSLPSLYHSTSMLTFEGHKVQGVDEISQKLNLLPFDQCQHVISTIDSQPSSFTGGIMVFVSGSLKLPGEEHQLRFSQMFHLVPSSEGSFFVQNDIFRLNYG
SIO_010081: LOC100248590
subclass of: SO_0000673
so part of: LOC100248590
location: join(254282..254584,254809..254883)
location: region:254282-254883:1
so has part: feature:254282-254584:1:exon
so has part: feature:254809-254883:1:exon

XP_002267081.3
type: Protein
SIO_000068: ncbiprotein

position:254282:1
position: 254282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254883:1
position: 254883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254282-254584:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254809-254883:1:exon

LOC100253692
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100253692
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 256022..258294
location: region:256022-258294:1
so has part: feature:256022-258294:1:exon
subclass of: SO_0000010

100253692
type: Gene
SIO_000068: ncbigene

position:256022:1
position: 256022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258294:1
position: 258294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256022-258294:1:exon

LOC100253692
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100253692
product: pectinesterase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 229 samples with support for all annotated introns
transcript id: XM_002266944.4
SIO_010081: LOC100253692
subclass of: SO_0000673
so part of: LOC100253692
location: join(256022..257056,257431..258294)
location: region:256022-258294:1
so has part: feature:256022-257056:1:exon
so has part: feature:257431-258294:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:256022-257056:1:exon

position:257056:1
position: 257056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:257431-258294:1:exon

position:257431:1
position: 257431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100253692
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100253692
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pectinesterase
translation: MATSLEPLLRSSQIKASHCKSLYLVIFLAAIITPIALFSIPLIKTISTGPPRVLHNHVMEMEDVDQLQRFLKESMSHLQGVMEMTVDVNRRMNDPRDQAALSDCVELMDLSMGRIRDSVEALGRGTVDSHADAHAWLSGVLTNYITCTDGINGPSRISMERGLKHLISRAETSLAMLVAVSPAKEDVLQPLHSEFPPWVDSRDRKILESSSKDIKANVVVAKDGSGNYKTVKEAIASVPNNSKTRYVIHVKKGTYKENVEIVTKQKNVMIVGDGMDSTVITGSLNVIDGSTTFKSATLAAVGDGFIAQDIWFQNTAGPQKHQAVALRVGADQAVINRCRIDAYQDTLYAHTNRQFYRDCYITGTVDFIFGNAAVVFQNCKLVARKPMDKQANMVTAQGRTNPYQNTGTSIQNCNIIASSDLEPVKGTIKSYLGRPWKEYSRAVVLQSYIGDHIDPAGWSVWDGEFALKTLYYGEYVNRGPGAGTSKRVKWPGYRVITSPAEARNFTVAELIQGGTWLESTGVAYTEGL
SIO_010081: LOC100253692
subclass of: SO_0000673
so part of: LOC100253692
location: join(256162..257056,257431..258122)
location: region:256162-258122:1
so has part: feature:256162-257056:1:exon
so has part: feature:257431-258122:1:exon

XP_002266980.1
type: Protein
SIO_000068: ncbiprotein

position:256162:1
position: 256162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258122:1
position: 258122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256162-257056:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:257431-258122:1:exon

LOC100258839
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100258839
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 259492..262911
location: region:259492-262911:1
so has part: feature:259492-262911:1:exon
subclass of: SO_0000010

100258839
type: Gene
SIO_000068: ncbigene

position:259492:1
position: 259492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262911:1
position: 262911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259492-262911:1:exon

LOC100258839
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100258839
product: CRIB domain-containing protein RIC10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 144 samples with support for all annotated introns
transcript id: XM_002266897.3
SIO_010081: LOC100258839
subclass of: SO_0000673
so part of: LOC100258839
location: join(259492..260162,260424..260588,260715..260812,260946..261054,262341..262911)
location: region:259492-262911:1
so has part: feature:259492-260162:1:exon
so has part: feature:260424-260588:1:exon
so has part: feature:260715-260812:1:exon
so has part: feature:260946-261054:1:exon
so has part: feature:262341-262911:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:259492-260162:1:exon

position:260162:1
position: 260162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:260424-260588:1:exon

position:260424:1
position: 260424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260588:1
position: 260588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:260715-260812:1:exon

position:260715:1
position: 260715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260812:1
position: 260812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:260946-261054:1:exon

position:260946:1
position: 260946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261054:1
position: 261054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:262341-262911:1:exon

position:262341:1
position: 262341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100258839
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100258839
product: CRIB domain-containing protein RIC10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 168 samples with support for all annotated introns
transcript id: XM_019222590.1
SIO_010081: LOC100258839
subclass of: SO_0000673
so part of: LOC100258839
location: join(260181..260588,260715..260812,260946..261054,262341..262911)
location: region:260181-262911:1
so has part: feature:260181-260588:1:exon
so has part: feature:260715-260812:1:exon
so has part: feature:260946-261054:1:exon
so has part: feature:262341-262911:1:exon

position:260181:1
position: 260181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260181-260588:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:260715-260812:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:260946-261054:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:262341-262911:1:exon

LOC100258839
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100258839
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CRIB domain-containing protein RIC10
translation: MATKMKGIYKGFKYISQIFVVKEREMEIGYPTDVKHVAHIGWDGPSGSAPSWMNEYKSTHDFSSSSLGSFIEPRDTNNIVARSTWSSQDFEQSMGQHPVSEMFKDCPPTDVPNIPKKHKRKKTKSTSSPKSSSSSVSRSSRALKSKATYMELETTSNLQL
SIO_010081: LOC100258839
subclass of: SO_0000673
so part of: LOC100258839
location: join(260531..260588,260715..260812,260946..261054,262341..262558)
location: region:260531-262558:1
so has part: feature:260531-260588:1:exon
so has part: feature:260715-260812:1:exon
so has part: feature:260946-261054:1:exon
so has part: feature:262341-262558:1:exon

XP_019078135.1
type: Protein
SIO_000068: ncbiprotein

position:260531:1
position: 260531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262558:1
position: 262558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260531-260588:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:260715-260812:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:260946-261054:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:262341-262558:1:exon

LOC100258839
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100258839
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CRIB domain-containing protein RIC10
translation: MATKMKGIYKGFKYISQIFVVKEREMEIGYPTDVKHVAHIGWDGPSGSAPSWMNEYKSTHDFSSSSLGSFIEPRDTNNIVARSTWSSQDFEQSMGQHPVSEMFKDCPPTDVPNIPKKHKRKKTKSTSSPKSSSSSVSRSSRALKSKATYMELETTSNLQL
SIO_010081: LOC100258839
subclass of: SO_0000673
so part of: LOC100258839
location: join(260531..260588,260715..260812,260946..261054,262341..262558)
location: region:260531-262558:1
so has part: feature:260531-260588:1:exon
so has part: feature:260715-260812:1:exon
so has part: feature:260946-261054:1:exon
so has part: feature:262341-262558:1:exon

XP_002266933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:260531-260588:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:260715-260812:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:260946-261054:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:262341-262558:1:exon

LOC100267591
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100267591
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 265163..267692
location: region:265163-267692:1
so has part: feature:265163-267692:1:exon
subclass of: SO_0000010

100267591
type: Gene
SIO_000068: ncbigene

position:265163:1
position: 265163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267692:1
position: 267692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265163-267692:1:exon

LOC100267591
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100267591
product: COBRA-like protein 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_002264884.3
SIO_010081: LOC100267591
subclass of: SO_0000673
so part of: LOC100267591
location: join(265163..265742,265833..267692)
location: region:265163-267692:1
so has part: feature:265163-265742:1:exon
so has part: feature:265833-267692:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:265163-265742:1:exon

position:265742:1
position: 265742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:265833-267692:1:exon

position:265833:1
position: 265833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100267591
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100267591
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COBRA-like protein 10
translation: MKMVWRLLVYMFFISFTSDQFIRAQDYTDYVPPAPPPEEENCDGIFVSYTFISRQKEFPHVKNASAQAWAFKAMATVLNAGTFELKAWKIFIGFQHDEILVSAGGAVVMNGDDMPAAVGNGTYLSGFPQTDLKTSIETAGDLTQIEVQIPITGTQFGVKPPGVPMPRTISLANDGYKCPKPTVKKTAMHVCCTRKPKFKVKTESTKFLPRQYGDLSFVYDIIQAYDGNYLAQVTIENNHPLGRLDHWNLTWEWMRGEFINTMRGAYTHKIDSTDCIYGAAGQYYKGLDFSQVMNCEKNPIIGDLPSEKAKDDKVGFIPHCCRNGSLLPTIMDQTKSKAAFQLQVYKIPPDMNRTVLFPPQKWKIVGVLNPDYKCGPPIRVDPTEFPDASGLLQVTSSAIASWQVTCNITRPKKRNSRCCVSYSAYYNDSVIPCNTCACGCDDTETCNPNIPSMLLPSEALLVPFENRTAKAKAWAKLKHLNVPSPLPCGDNCGVSINWHINSDYKTGWTARITLFNWEEIIFEDWFVAVEMKKAFLGYENIYSFNGTVLKDINNTLFFQGLPGLNYLMGEVNGSDPKSDPKVPGKQQSVISFKKKLTPGIKIVQGDGFPSKLYFNGEECSLPTEFPIGDGNRYRVNLVPVILLTLVTSMLMTNHLH
SIO_010081: LOC100267591
subclass of: SO_0000673
so part of: LOC100267591
location: join(265190..265742,265833..267250)
location: region:265190-267250:1
so has part: feature:265190-265742:1:exon
so has part: feature:265833-267250:1:exon

XP_002264920.2
type: Protein
SIO_000068: ncbiprotein

position:265190:1
position: 265190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267250:1
position: 267250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265190-265742:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:265833-267250:1:exon

LOC104880451
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC104880451
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 272120..275368
location: region:272120-275368:1
so has part: feature:272120-275368:1:exon
subclass of: SO_0000010

104880451
type: Gene
SIO_000068: ncbigene

position:272120:1
position: 272120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275368:1
position: 275368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272120-275368:1:exon

LOC104880451
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104880451
product: uncharacterized LOC104880451
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_010657054.2
SIO_010081: LOC104880451
subclass of: SO_0000673
so part of: LOC104880451
location: join(272120..272565,272704..273288,273386..274575,274660..275368)
location: region:272120-275368:1
so has part: feature:272120-272565:1:exon
so has part: feature:272704-273288:1:exon
so has part: feature:273386-274575:1:exon
so has part: feature:274660-275368:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:272120-272565:1:exon

position:272565:1
position: 272565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:272704-273288:1:exon

position:272704:1
position: 272704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273288:1
position: 273288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:273386-274575:1:exon

position:273386:1
position: 273386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274575:1
position: 274575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:274660-275368:1:exon

position:274660:1
position: 274660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104880451
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104880451
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC104880451
translation: MATKKTTSSSRASEVRGKAIDKLDAKEFRERFCIPDNVAVELLNGRVLVPFEKAEERTMIFSKEQFNAGLRFPLPPLFKEFLHFTQIPPVFIHPNIVRVLMGCSIINMLFNLDITLLEVFFVYSLRKVKNDIFSMSAHLPSLQLVTELPDSTKGGATGHVVVRGAWAGLLEHPARPFSPNYSLVVPGPELRGHLVDWVEKASFGCLSKLFEIDVKERQCNTLLTARNLAAVVRESREYVINILPRKMPKEVVPGEHYTVKDFPIYEALKEADSKKRRLLLEGREKKKNEGTLRKAPGQKGDADSSPKKDPVKRRKLVKKHGKDTKEPTPPLEFAPPPIIHEAEVMIEEPVNAAPHSISSGSGHLAGLNHSSTSLTAVARLANMAEEAASVNHPDSRNLDADAAEAVCATPTEEVGVENQSQPSDDPDRLALVLVTGPPSKKARSVRNLRSGLHGRLQERQQEIEVSCSSAHDTHPEGGEVEMVTKISAVPVVVSDEFARGVSHPAVDADAAPGDVHPAVDVEVPNPEQECSSLASSGGDPVNDASCTSASPFSYAELEEKLKQIPPGLPLAKPSAQMFEMVETLVSGLRGMATQYDLFTDLLRTADYMKAFATRRKDAEDQLRLRLAEAEASLSTARGENEALRADLADAKVREESMDARLLEAANEMADLRGEVRQLRTEVSIEKKQREDLQLRLIAQKEELEREFAVEREEIEAEYQKQVDDTFIFGYRCCMKKNGIKRDTPSIPPGDEKKLHEKLAP
SIO_010081: LOC104880451
subclass of: SO_0000673
so part of: LOC104880451
location: join(272730..273288,273386..274575,274660..275193)
location: region:272730-275193:1
so has part: feature:272730-273288:1:exon
so has part: feature:273386-274575:1:exon
so has part: feature:274660-275193:1:exon

XP_010655356.1
type: Protein
SIO_000068: ncbiprotein

position:272730:1
position: 272730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275193:1
position: 275193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272730-273288:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:273386-274575:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274660-275193:1:exon

LOC100264009
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100264009
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 299175..304937
location: region:299175-304937:1
so has part: feature:299175-304937:1:exon
subclass of: SO_0000010

100264009
type: Gene
SIO_000068: ncbigene

position:299175:1
position: 299175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304937:1
position: 304937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299175-304937:1:exon

LOC100264009
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100264009
product: homeobox-leucine zipper protein MERISTEM L1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 118 samples with support for all annotated introns
transcript id: XM_002266652.3
SIO_010081: LOC100264009
subclass of: SO_0000673
so part of: LOC100264009
location: join(299175..299540,299747..300092,300587..300849,300947..301064,301233..301421,301517..301957,302053..302154,302242..302442,302532..302706,302804..303075,303475..303570,303681..304066,304431..304937)
location: region:299175-304937:1
so has part: feature:299175-299540:1:exon
so has part: feature:299747-300092:1:exon
so has part: feature:300587-300849:1:exon
so has part: feature:300947-301064:1:exon
so has part: feature:301233-301421:1:exon
so has part: feature:301517-301957:1:exon
so has part: feature:302053-302154:1:exon
so has part: feature:302242-302442:1:exon
so has part: feature:302532-302706:1:exon
so has part: feature:302804-303075:1:exon
so has part: feature:303475-303570:1:exon
so has part: feature:303681-304066:1:exon
so has part: feature:304431-304937:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:299175-299540:1:exon

position:299540:1
position: 299540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:299747-300092:1:exon

position:299747:1
position: 299747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300092:1
position: 300092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:300587-300849:1:exon

position:300587:1
position: 300587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300849:1
position: 300849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:300947-301064:1:exon

position:300947:1
position: 300947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301064:1
position: 301064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:301233-301421:1:exon

position:301233:1
position: 301233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301421:1
position: 301421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:301517-301957:1:exon

position:301517:1
position: 301517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301957:1
position: 301957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:302053-302154:1:exon

position:302053:1
position: 302053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302154:1
position: 302154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:302242-302442:1:exon

position:302242:1
position: 302242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302442:1
position: 302442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:302532-302706:1:exon

position:302532:1
position: 302532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302706:1
position: 302706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:302804-303075:1:exon

position:302804:1
position: 302804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303075:1
position: 303075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:303475-303570:1:exon

position:303475:1
position: 303475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303570:1
position: 303570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:303681-304066:1:exon

position:303681:1
position: 303681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304066:1
position: 304066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:304431-304937:1:exon

position:304431:1
position: 304431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100264009
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100264009
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox-leucine zipper protein MERISTEM L1
translation: MFQPNMFDSHHHLLDMPHKTPESEMGKIRDEEFESKSGTENMDAPSGDDQDPNQRPKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENSNLRAENEKLRAENIRYKEALSNATCPHCGGPASIGEMSFDEQHLRIENARLRDEIDRISGIAAKYVGKPMVSYPHLSTHTSSRSLDLGVGNFGAQSGIVGDMYGGGDLLRSVSLPTEADKPMIVELAVAAMEELIRMAQAGEPLWIPTSDNSTEILSEDEYLRTFPRGIGPKPLGLKSEASRETAVVIMNHISLVEILMDVNQWSSVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKHHPDGTWAVVDVSLDNLRSGPITRNRRRPSGCLIQELPNGYSKVIWVEHVEVDDRAVHNIYRPLVNSGLAFGAKRWVATLDRQCERLASAMASNIPAGDVGVITSPEGRKSMLKLAERMVMSFCAGVGASTTHTWTTLSGSGADDVRVMTRKSMDDPGRPPGIVLSAATSFWIPVPPKRVFDFLRAENSRSEWDILSNGGLVQEMAHIANGRDPGNCVSLLRVNSANSSQSNMLILQESCTDPTGSYVIYAPVDIVAMNVVLSGGDPDYVALLPSGFAILPDGAVLHGGGILDVGSGGSLLTVAFQILVDSAPTAKLSLGSVATVNSLIKCTVERIKAAVSCENT
SIO_010081: LOC100264009
subclass of: SO_0000673
so part of: LOC100264009
location: join(300629..300849,300947..301064,301233..301421,301517..301957,302053..302154,302242..302442,302532..302706,302804..303075,303475..303570,303681..304046)
location: region:300629-304046:1
so has part: feature:300629-300849:1:exon
so has part: feature:300947-301064:1:exon
so has part: feature:301233-301421:1:exon
so has part: feature:301517-301957:1:exon
so has part: feature:302053-302154:1:exon
so has part: feature:302242-302442:1:exon
so has part: feature:302532-302706:1:exon
so has part: feature:302804-303075:1:exon
so has part: feature:303475-303570:1:exon
so has part: feature:303681-304046:1:exon

XP_002266688.1
type: Protein
SIO_000068: ncbiprotein

position:300629:1
position: 300629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304046:1
position: 304046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300629-300849:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:300947-301064:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:301233-301421:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:301517-301957:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:302053-302154:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:302242-302442:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:302532-302706:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:302804-303075:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:303475-303570:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:303681-304046:1:exon

LOC104880452
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC104880452
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(305050..307186)
location: region:305050-307186:-1
so has part: feature:305050-307186:-1:exon
subclass of: SO_0000011

104880452
type: Gene
SIO_000068: ncbigene

position:305050:-1
position: 305050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307186:-1
position: 307186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305050-307186:-1:exon

LOC104880452
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 29760
nc RNA class: lncRNA
gene: LOC104880452
product: uncharacterized LOC104880452
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_786696.2
SIO_010081: LOC104880452
subclass of: SO_0000673
so part of: LOC104880452
location: complement(join(305050..305129,305233..306626,306855..307186))
location: region:305050-307186:-1
so has part: feature:306855-307186:-1:exon
so has part: feature:305233-306626:-1:exon
so has part: feature:305050-305129:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:306855-307186:-1:exon

position:306855:-1
position: 306855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:305233-306626:-1:exon

position:305233:-1
position: 305233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306626:-1
position: 306626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:305050-305129:-1:exon

position:305129:-1
position: 305129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100250414
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100250414
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 314894..317425
location: region:314894-317425:1
so has part: feature:314894-317425:1:exon
subclass of: SO_0000010

100250414
type: Gene
SIO_000068: ncbigene

position:314894:1
position: 314894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317425:1
position: 317425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314894-317425:1:exon

LOC100250414
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100250414
product: tryptophan synthase beta chain 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 74 samples with support for all annotated introns
transcript id: XM_002264793.3
SIO_010081: LOC100250414
subclass of: SO_0000673
so part of: LOC100250414
location: join(314894..315295,315441..315797,315905..316338,316817..316911,317024..317425)
location: region:314894-317425:1
so has part: feature:314894-315295:1:exon
so has part: feature:315441-315797:1:exon
so has part: feature:315905-316338:1:exon
so has part: feature:316817-316911:1:exon
so has part: feature:317024-317425:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:314894-315295:1:exon

position:315295:1
position: 315295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:315441-315797:1:exon

position:315441:1
position: 315441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315797:1
position: 315797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:315905-316338:1:exon

position:315905:1
position: 315905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316338:1
position: 316338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:316817-316911:1:exon

position:316817:1
position: 316817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316911:1
position: 316911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:317024-317425:1:exon

position:317024:1
position: 317024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100250414
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100250414
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tryptophan synthase beta chain 1
translation: MACNLQTSFLPALKFPAEATLDKRRGNALVVCSVASAADSIMTASTPTGSAVVVRPRPLSRREVETSERKMTGTTGKFGRFGGKFVPETLMTCLSKLEAEFNLVLHDPEFQEELATALRDYVGRETPLYFAQRLTDHYKNESGCGPEIYLKREDLNHGGAHKINNAIAQAMIAKRMGRTSIVAATGAGQHGVATAAACAKLSLKCTIVMGTLDMERQASNVLLMKLLGAEVKSVDGNFKNATSEAIREWVGNLETNYFLIGTAVGPHPCPSMVREFQSIIGKETRRQAMERWGRKPDVLVACVGSGSNALGLFHEFIADEDVRMIGVEAAGFGLESGKHSATLAKGEVGVYHGAMSYLLQDEEGQIVGPHSIGVGMEYPGVSPELSFLKETGRVESYSVTDQEAVDAYQLLCRLEGIFPALEASHALAFLDKLCPTLPDGGKVVVNCSGRGDKDAPTVFRLTQGSSPGDNKRHPVSP
SIO_010081: LOC100250414
subclass of: SO_0000673
so part of: LOC100250414
location: join(314963..315295,315441..315797,315905..316338,316817..316911,317024..317238)
location: region:314963-317238:1
so has part: feature:314963-315295:1:exon
so has part: feature:315441-315797:1:exon
so has part: feature:315905-316338:1:exon
so has part: feature:316817-316911:1:exon
so has part: feature:317024-317238:1:exon

XP_002264829.1
type: Protein
SIO_000068: ncbiprotein

position:314963:1
position: 314963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317238:1
position: 317238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314963-315295:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:315441-315797:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:315905-316338:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:316817-316911:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:317024-317238:1:exon

LOC100255600
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100255600
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(317749..328265)
location: region:317749-328265:-1
so has part: feature:317749-328265:-1:exon
subclass of: SO_0000010

100255600
type: Gene
SIO_000068: ncbigene

position:317749:-1
position: 317749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328265:-1
position: 328265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317749-328265:-1:exon

LOC100255600
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100255600
product: polyadenylation and cleavage factor homolog 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
transcript id: XM_019222670.1
SIO_010081: LOC100255600
subclass of: SO_0000673
so part of: LOC100255600
location: complement(join(317749..318174,318992..319501,319639..320610,321287..322120,325180..325443,325554..325655,327539..328265))
location: region:317749-328265:-1
so has part: feature:327539-328265:-1:exon
so has part: feature:325554-325655:-1:exon
so has part: feature:325180-325443:-1:exon
so has part: feature:321287-322120:-1:exon
so has part: feature:319639-320610:-1:exon
so has part: feature:318992-319501:-1:exon
so has part: feature:317749-318174:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:327539-328265:-1:exon

position:327539:-1
position: 327539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:325554-325655:-1:exon

position:325554:-1
position: 325554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325655:-1
position: 325655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:325180-325443:-1:exon

position:325180:-1
position: 325180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325443:-1
position: 325443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:321287-322120:-1:exon

position:321287:-1
position: 321287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322120:-1
position: 322120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:319639-320610:-1:exon

position:319639:-1
position: 319639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320610:-1
position: 320610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:318992-319501:-1:exon

position:318992:-1
position: 318992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319501:-1
position: 319501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:317749-318174:-1:exon

position:318174:-1
position: 318174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100255600
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100255600
product: polyadenylation and cleavage factor homolog 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 205 samples with support for all annotated introns
transcript id: XM_010657055.2
SIO_010081: LOC100255600
subclass of: SO_0000673
so part of: LOC100255600
location: complement(join(317749..318174,318992..319540,319639..320610,321287..322120,325180..325443,325554..325655,327539..328254))
location: region:317749-328254:-1
so has part: feature:327539-328254:-1:exon
so has part: feature:325554-325655:-1:exon
so has part: feature:325180-325443:-1:exon
so has part: feature:321287-322120:-1:exon
so has part: feature:319639-320610:-1:exon
so has part: feature:318992-319540:-1:exon
so has part: feature:317749-318174:-1:exon

position:328254:-1
position: 328254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327539-328254:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:325554-325655:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:325180-325443:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:321287-322120:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:319639-320610:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:318992-319540:-1:exon

position:319540:-1
position: 319540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:317749-318174:-1:exon

LOC100255600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100255600
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyadenylation and cleavage factor homolog 4 isoform X2
translation: MDGDRFVVSARENPRTLGFAPERGPGGSATATAKPMSNEISQKPLVPIVDRFKALLKQREDELRVLSGDDVPPPTTEEIVRLYEIVLSELIFNSKPIITDLTIIAGDHKEHADGIADAICARIVEVSVEQKLPSLYLLDSIVKNIGRDYIKHFSSRLPEVFCEAYRQVHPNLYTAMRHLFGTWSAVFPPSVLRKIEAQLQFSPTLNNQSSGMASLRASESPRPTHSIHVNPKYLEARHQFEHSPVDSNMQHSRGTSSTLKVYGQKPAIGYDEYDSGHTEVISSQARAQRLNSTGSVGRTPFALGADKLLPSSTARVAKSTSPRIGTAGSSSPPAEKFSMDNSPRRVVERASPSHRGFEYGLVRSMGRDEETSDRQRKHWSNDRFETSAAHNLSNGRERQGLRALIDAYGNDRGQRTLNDKPPKVGHLDMNGTDNKVPKKAWQNTEEEEYDWEDMNPTLANRRQCNNILQSSVSPFGSFRTRPGSGALGAAPLESDFNRSKWSGQAQLSMVDDSPVIAEDVVPTTSLGRGSISKPGFGNETKFHGSHYPQESWNLVHRVPQSSQHNRNAKGRGKNFNTPFLGSGISSSAAETISPLISNIPDADAQLRRLPTVASRMGSSSLNSMNVEVQSAAAPASTGMWPPVNVHKTHLPPLLSNLPQTKQIRNQFNLMNATTAVVNQDPNKSLFLPELDSKLPQMANRQAGSIPLNGKNQTQVTRLQPQFLPQETHGNFVPSTTAPVSSYSVAPPLNPGYTPQGHAAATSTILLNPVPGVHSSIPIHNISNSSVHFQGGALPPLPPGPPPATSQMINIPQNTGPIVSNQQPGSALSGLISSLMAQGLISLAKQPTVQVRHESAISALYGDMSRQCTTCGLRFKCQEEHSSHMDWHVTKNRISKNRKQKPSRKWFVSASMWLSSAEALGTDAVPGFLPTETIAEKKDDEELAVPADEDQNVCALCGEPFDDFYSDETEEWMYKGAVYLNAPEGSAAGMDRSQLGPIVHAKCRSESNVVSPEDFGQDEGGNMEEGSKRKRMRR
SIO_010081: LOC100255600
subclass of: SO_0000673
so part of: LOC100255600
location: complement(join(318130..318174,318992..319501,319639..320610,321287..322120,325180..325443,325554..325655,327539..327913))
location: region:318130-327913:-1
so has part: feature:327539-327913:-1:exon
so has part: feature:325554-325655:-1:exon
so has part: feature:325180-325443:-1:exon
so has part: feature:321287-322120:-1:exon
so has part: feature:319639-320610:-1:exon
so has part: feature:318992-319501:-1:exon
so has part: feature:318130-318174:-1:exon

XP_019078215.1
type: Protein
SIO_000068: ncbiprotein

position:318130:-1
position: 318130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327913:-1
position: 327913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327539-327913:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:325554-325655:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:325180-325443:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:321287-322120:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:319639-320610:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:318992-319501:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:318130-318174:-1:exon

LOC100255600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100255600
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyadenylation and cleavage factor homolog 4 isoform X1
translation: MDGDRFVVSARENPRTLGFAPERGPGGSATATAKPMSNEISQKPLVPIVDRFKALLKQREDELRVLSGDDVPPPTTEEIVRLYEIVLSELIFNSKPIITDLTIIAGDHKEHADGIADAICARIVEVSVEQKLPSLYLLDSIVKNIGRDYIKHFSSRLPEVFCEAYRQVHPNLYTAMRHLFGTWSAVFPPSVLRKIEAQLQFSPTLNNQSSGMASLRASESPRPTHSIHVNPKYLEARHQFEHSPVDSNMQHSRGTSSTLKVYGQKPAIGYDEYDSGHTEVISSQARAQRLNSTGSVGRTPFALGADKLLPSSTARVAKSTSPRIGTAGSSSPPAEKFSMDNSPRRVVERASPSHRGFEYGLVRSMGRDEETSDRQRKHWSNDRFETSAAHNLSNGRERQGLRALIDAYGNDRGQRTLNDKPPKVGHLDMNGTDNKVPKKAWQNTEEEEYDWEDMNPTLANRRQCNNILQSSVSPFGSFRTRPGSGALGAAPLESDFNRSKWSGQAQLSMVDDSPVIAEDVVPTTSLGRGSISKPGFGNETKFHGSHYPQESWNLVHRVPQSSQHNRNAKGRGKNFNTPFLGSGISSSAAETISPLISNIPDADAQLRRLPTVASRMGSSSLNSMNVEVQSAAAPASTGMWPPVNVHKTHLPPLLSNLPQTKQIRNQFNLMNATTAVVNQDPNKSLFLPELDSKLPQMANRQAGSIPLNGKNQTQVTRLQPQFLPQETHGNFVPSTTAPVSSYSVAPPLNPGYTPQGHAAATSTILLNPVPGVHSSIPIHNISNSSVHFQGGALPPLPPGPPPATSQMINIPQNTGPIVSNQQPGSALSGLISSLMAQGLISLAKQPTVQDSVGIEFNVDLLKVRHESAISALYGDMSRQCTTCGLRFKCQEEHSSHMDWHVTKNRISKNRKQKPSRKWFVSASMWLSSAEALGTDAVPGFLPTETIAEKKDDEELAVPADEDQNVCALCGEPFDDFYSDETEEWMYKGAVYLNAPEGSAAGMDRSQLGPIVHAKCRSESNVVSPEDFGQDEGGNMEEGSKRKRMRR
SIO_010081: LOC100255600
subclass of: SO_0000673
so part of: LOC100255600
location: complement(join(318130..318174,318992..319540,319639..320610,321287..322120,325180..325443,325554..325655,327539..327913))
location: region:318130-327913:-1
so has part: feature:327539-327913:-1:exon
so has part: feature:325554-325655:-1:exon
so has part: feature:325180-325443:-1:exon
so has part: feature:321287-322120:-1:exon
so has part: feature:319639-320610:-1:exon
so has part: feature:318992-319540:-1:exon
so has part: feature:318130-318174:-1:exon

XP_010655357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327539-327913:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:325554-325655:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:325180-325443:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:321287-322120:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:319639-320610:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:318992-319540:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:318130-318174:-1:exon

LOC104880471
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC104880471
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(334867..338374)
location: region:334867-338374:-1
so has part: feature:334867-338374:-1:exon
subclass of: SO_0000010

104880471
type: Gene
SIO_000068: ncbigene

position:334867:-1
position: 334867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338374:-1
position: 338374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334867-338374:-1:exon

LOC104880471
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104880471
product: F-box/LRR-repeat protein At3g03360-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010657109.2
SIO_010081: LOC104880471
subclass of: SO_0000673
so part of: LOC104880471
location: complement(join(334867..335243,335360..335536,335609..336652,338345..338374))
location: region:334867-338374:-1
so has part: feature:338345-338374:-1:exon
so has part: feature:335609-336652:-1:exon
so has part: feature:335360-335536:-1:exon
so has part: feature:334867-335243:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:338345-338374:-1:exon

position:338345:-1
position: 338345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:335609-336652:-1:exon

position:335609:-1
position: 335609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336652:-1
position: 336652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:335360-335536:-1:exon

position:335360:-1
position: 335360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335536:-1
position: 335536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:334867-335243:-1:exon

position:335243:-1
position: 335243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104880471
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104880471
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/LRR-repeat protein At3g03360-like
translation: MADTETIPREYSCDFISRLSHELLCSILERLPLDEAARTGVLSKRWKDLWKYTAFIDVKPLGGDSSRLHRLISGLSQFVRLHQAERIDLFSVKFTYNPDMHSQVDSWVLFAINKHVRELHLDFDVGDDNVAGDTDDGTRYELHPSVFTSGSLVHLGLKFCALKFPSSVRLSSLKVVTLHRIELADDAVEMITSNSPLLQQLSLLECNRTRDLFIHVAPNRGSCTVMIEENSYDVNPSSRMDIKAPGVEELFFLGSLPRFKYRITDKSACLHVNIILHGKFVEFLGEEEHDQDQDGNQLGMVVNELGIQRHEEAFRELLADLQDSEVVLRAYEWCIRLLSLSQMQDSEPLSMNCTYIELRTCLQKWDLPGIIFILKSCRKLEKLVILTADIDETMEASQLTMMLMQHDYEESSYITSQVQCFEGHFISLRTVEFKNTAGDYQSWEHGCFDLPGFFSGSQGVYLLNLLNKSSKLEYVVFATNNQKQAFRLKNKESDCWVPREP
SIO_010081: LOC104880471
subclass of: SO_0000673
so part of: LOC104880471
location: complement(join(334923..335243,335360..335536,335609..336616))
location: region:334923-336616:-1
so has part: feature:335609-336616:-1:exon
so has part: feature:335360-335536:-1:exon
so has part: feature:334923-335243:-1:exon

XP_010655411.1
type: Protein
SIO_000068: ncbiprotein

position:334923:-1
position: 334923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336616:-1
position: 336616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335609-336616:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:335360-335536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334923-335243:-1:exon

LOC100241727
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100241727
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <340643..344599
location: region:340643-344599:1
so has part: feature:340643-344599:1:exon
subclass of: SO_0000010

100241727
type: Gene
SIO_000068: ncbigene

position:340643:1
position: 340643
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:344599:1
position: 344599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340643-344599:1:exon

LOC100241727
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100241727
product: glucose-6-phosphate/phosphate translocator 2, chloroplastic
inference: similar to RNA sequence (same species):INSD:GAKH01080014.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 1640 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 240 samples with support for all annotated introns
transcript id: XM_002266020.3
SIO_010081: LOC100241727
subclass of: SO_0000673
so part of: LOC100241727
location: join(<340643..341440,341719..341944,342071..342293,342980..343193,344288..344599)
location: region:340643-344599:1
so has part: feature:340643-341440:1:exon
so has part: feature:341719-341944:1:exon
so has part: feature:342071-342293:1:exon
so has part: feature:342980-343193:1:exon
so has part: feature:344288-344599:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:340643-341440:1:exon

position:341440:1
position: 341440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:341719-341944:1:exon

position:341719:1
position: 341719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341944:1
position: 341944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:342071-342293:1:exon

position:342071:1
position: 342071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342293:1
position: 342293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:342980-343193:1:exon

position:342980:1
position: 342980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343193:1
position: 343193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:344288-344599:1:exon

position:344288:1
position: 344288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100241727
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100241727
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphate/phosphate translocator 2, chloroplastic
translation: MISSIKQSTGSFTRCDFLPRRQRCVAKSDVVSVPSSANVQGFKCSAKPLYICSVEGFGSRSIGSKSSSVCRAYEAERSQPLDLNIELSDQEARSEAAQKLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLATGSLMMLISWAVRIAEPPKTDLDFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYFSLLPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKRGMKGKSVGGMNYYACLSMLSLLILTPFAIAVEGPQMWAAGWQKAISQIGPNFIWWVAAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAKQ
SIO_010081: LOC100241727
subclass of: SO_0000673
so part of: LOC100241727
location: join(340934..341440,341719..341944,342071..342293,342980..343193,344288..344299)
location: region:340934-344299:1
so has part: feature:340934-341440:1:exon
so has part: feature:341719-341944:1:exon
so has part: feature:342071-342293:1:exon
so has part: feature:342980-343193:1:exon
so has part: feature:344288-344299:1:exon

XP_002266056.1
type: Protein
SIO_000068: ncbiprotein

position:340934:1
position: 340934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344299:1
position: 344299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340934-341440:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:341719-341944:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:342071-342293:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:342980-343193:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:344288-344299:1:exon

LOC100265882
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100265882
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 345973..347750
location: region:345973-347750:1
so has part: feature:345973-347750:1:exon
subclass of: SO_0000010

100265882
type: Gene
SIO_000068: ncbigene

position:345973:1
position: 345973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347750:1
position: 347750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345973-347750:1:exon

LOC100265882
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100265882
product: uncharacterized LOC100265882
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 253 samples with support for all annotated introns
transcript id: XM_002266150.3
SIO_010081: LOC100265882
subclass of: SO_0000673
so part of: LOC100265882
location: join(345973..346152,346983..347062,347443..347750)
location: region:345973-347750:1
so has part: feature:345973-346152:1:exon
so has part: feature:346983-347062:1:exon
so has part: feature:347443-347750:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:345973-346152:1:exon

position:346152:1
position: 346152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:346983-347062:1:exon

position:346983:1
position: 346983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347062:1
position: 347062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:347443-347750:1:exon

position:347443:1
position: 347443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100265882
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100265882
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100265882
translation: MSSRPVPRRESPWGTPEGEHRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCMRSKPGEEPTDPFHYLQLDPPKREVQLE
SIO_010081: LOC100265882
subclass of: SO_0000673
so part of: LOC100265882
location: join(346042..346152,346983..347062,347443..347512)
location: region:346042-347512:1
so has part: feature:346042-346152:1:exon
so has part: feature:346983-347062:1:exon
so has part: feature:347443-347512:1:exon

XP_002266186.1
type: Protein
SIO_000068: ncbiprotein

position:346042:1
position: 346042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347512:1
position: 347512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346042-346152:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:346983-347062:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347443-347512:1:exon

LOC100243556
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100243556
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 351015..354309
location: region:351015-354309:1
so has part: feature:351015-354309:1:exon
subclass of: SO_0000010

100243556
type: Gene
SIO_000068: ncbigene

position:351015:1
position: 351015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354309:1
position: 354309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351015-354309:1:exon

LOC100243556
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100243556
product: beta-glucosidase 46, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_019222765.1
SIO_010081: LOC100243556
subclass of: SO_0000673
so part of: LOC100243556
location: join(351015..351284,351403..351469,351561..351619,352090..352165,352248..352322,352391..352484,352580..352832,352985..353100,353202..353457,353539..353641,353719..353827,354075..354309)
location: region:351015-354309:1
so has part: feature:351015-351284:1:exon
so has part: feature:351403-351469:1:exon
so has part: feature:351561-351619:1:exon
so has part: feature:352090-352165:1:exon
so has part: feature:352248-352322:1:exon
so has part: feature:352391-352484:1:exon
so has part: feature:352580-352832:1:exon
so has part: feature:352985-353100:1:exon
so has part: feature:353202-353457:1:exon
so has part: feature:353539-353641:1:exon
so has part: feature:353719-353827:1:exon
so has part: feature:354075-354309:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:351015-351284:1:exon

position:351284:1
position: 351284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:351403-351469:1:exon

position:351403:1
position: 351403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351469:1
position: 351469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:351561-351619:1:exon

position:351561:1
position: 351561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351619:1
position: 351619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:352090-352165:1:exon

position:352090:1
position: 352090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352165:1
position: 352165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:352248-352322:1:exon

position:352248:1
position: 352248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352322:1
position: 352322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:352391-352484:1:exon

position:352391:1
position: 352391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352484:1
position: 352484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:352580-352832:1:exon

position:352580:1
position: 352580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352832:1
position: 352832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:352985-353100:1:exon

position:352985:1
position: 352985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353100:1
position: 353100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:353202-353457:1:exon

position:353202:1
position: 353202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353457:1
position: 353457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:353539-353641:1:exon

position:353539:1
position: 353539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353641:1
position: 353641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:353719-353827:1:exon

position:353719:1
position: 353719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353827:1
position: 353827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:354075-354309:1:exon

position:354075:1
position: 354075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100243556
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100243556
product: beta-glucosidase 46, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_002264642.4
SIO_010081: LOC100243556
subclass of: SO_0000673
so part of: LOC100243556
location: join(351016..351284,351403..351469,351561..351619,352090..352165,352248..352322,352397..352484,352580..352832,352985..353100,353202..353457,353539..353641,353719..353827,354075..354309)
location: region:351016-354309:1
so has part: feature:351016-351284:1:exon
so has part: feature:351403-351469:1:exon
so has part: feature:351561-351619:1:exon
so has part: feature:352090-352165:1:exon
so has part: feature:352248-352322:1:exon
so has part: feature:352397-352484:1:exon
so has part: feature:352580-352832:1:exon
so has part: feature:352985-353100:1:exon
so has part: feature:353202-353457:1:exon
so has part: feature:353539-353641:1:exon
so has part: feature:353719-353827:1:exon
so has part: feature:354075-354309:1:exon

position:351016:1
position: 351016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351016-351284:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:351403-351469:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:351561-351619:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:352090-352165:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:352248-352322:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:352397-352484:1:exon

position:352397:1
position: 352397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:352580-352832:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:352985-353100:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:353202-353457:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:353539-353641:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:353719-353827:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:354075-354309:1:exon

LOC100243556
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100243556
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-glucosidase 46 isoform X1
translation: MVCNLGFTAMNMSCLHKVFFLSQFLLSIVSVSCLIETLKQNLGGDPSLFPSNFLFGTASSSYQFEGAFLNDGKGLNNWDVFSHEPGNIRDGSTGDIAVDHYHRYLEDIDLMVSLGVNSYRFSISWARILPEGRFGEVNAAGIDYYNKLIDALVLKVTGLEPFVTLTHFDIPQELEDTFGGWLSPKLQEEFRYYADICFKTFGDRVKYWVTFNEPNIQVTAGYRSGSYPPSRCSSSYGNCTYGDSEKEPFVAAHNIILSHATVVDIYRRQYQEKQGGSIGIVLHAKWIEPFSNSTADKLAADRAQSFFMNWFLDPIIFGRYPEEMNTILGSILPEFSCNDRKKLNKALDFIGINHYTSLYAQDCIFSLCEPGKGASRTEGFCRQTPEKDGVSIGESTALAWLHVYPQGMEKMVTYVKERYSGIPMFITENGYVDENDPNSTIEEFLYDVKRVEYMAAYLDALSTAVRKGADVRGYFAWSLLDNFEWTYGYTKRFGLHHVDYGTLKRTPKLSATWYKLFIARYSLVKTLIVKEQ
SIO_010081: LOC100243556
subclass of: SO_0000673
so part of: LOC100243556
location: join(351096..351284,351403..351469,351561..351619,352090..352165,352248..352322,352391..352484,352580..352832,352985..353100,353202..353457,353539..353641,353719..353827,354075..354276)
location: region:351096-354276:1
so has part: feature:351096-351284:1:exon
so has part: feature:351403-351469:1:exon
so has part: feature:351561-351619:1:exon
so has part: feature:352090-352165:1:exon
so has part: feature:352248-352322:1:exon
so has part: feature:352391-352484:1:exon
so has part: feature:352580-352832:1:exon
so has part: feature:352985-353100:1:exon
so has part: feature:353202-353457:1:exon
so has part: feature:353539-353641:1:exon
so has part: feature:353719-353827:1:exon
so has part: feature:354075-354276:1:exon

XP_019078310.1
type: Protein
SIO_000068: ncbiprotein

position:351096:1
position: 351096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354276:1
position: 354276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351096-351284:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:351403-351469:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:351561-351619:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:352090-352165:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:352248-352322:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:352391-352484:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:352580-352832:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:352985-353100:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:353202-353457:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:353539-353641:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:353719-353827:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:354075-354276:1:exon

LOC100243556
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100243556
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-glucosidase 46 isoform X2
translation: MVCNLGFTAMNMSCLHKVFFLSQFLLSIVSVSCLIETLKQNLGGDPSLFPSNFLFGTASSSYQFEGAFLNDGKGLNNWDVFSHEPGNIRDGSTGDIAVDHYHRYLEDIDLMVSLGVNSYRFSISWARILPEGRFGEVNAAGIDYYNKLIDALVLKGLEPFVTLTHFDIPQELEDTFGGWLSPKLQEEFRYYADICFKTFGDRVKYWVTFNEPNIQVTAGYRSGSYPPSRCSSSYGNCTYGDSEKEPFVAAHNIILSHATVVDIYRRQYQEKQGGSIGIVLHAKWIEPFSNSTADKLAADRAQSFFMNWFLDPIIFGRYPEEMNTILGSILPEFSCNDRKKLNKALDFIGINHYTSLYAQDCIFSLCEPGKGASRTEGFCRQTPEKDGVSIGESTALAWLHVYPQGMEKMVTYVKERYSGIPMFITENGYVDENDPNSTIEEFLYDVKRVEYMAAYLDALSTAVRKGADVRGYFAWSLLDNFEWTYGYTKRFGLHHVDYGTLKRTPKLSATWYKLFIARYSLVKTLIVKEQ
SIO_010081: LOC100243556
subclass of: SO_0000673
so part of: LOC100243556
location: join(351096..351284,351403..351469,351561..351619,352090..352165,352248..352322,352397..352484,352580..352832,352985..353100,353202..353457,353539..353641,353719..353827,354075..354276)
location: region:351096-354276:1
so has part: feature:351096-351284:1:exon
so has part: feature:351403-351469:1:exon
so has part: feature:351561-351619:1:exon
so has part: feature:352090-352165:1:exon
so has part: feature:352248-352322:1:exon
so has part: feature:352397-352484:1:exon
so has part: feature:352580-352832:1:exon
so has part: feature:352985-353100:1:exon
so has part: feature:353202-353457:1:exon
so has part: feature:353539-353641:1:exon
so has part: feature:353719-353827:1:exon
so has part: feature:354075-354276:1:exon

XP_002264678.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:351096-351284:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:351403-351469:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:351561-351619:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:352090-352165:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:352248-352322:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:352397-352484:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:352580-352832:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:352985-353100:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:353202-353457:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:353539-353641:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:353719-353827:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:354075-354276:1:exon

LOC100248694
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100248694
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(354382..360500)
location: region:354382-360500:-1
so has part: feature:354382-360500:-1:exon
subclass of: SO_0000010

100248694
type: Gene
SIO_000068: ncbigene

position:354382:-1
position: 354382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360500:-1
position: 360500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354382-360500:-1:exon

LOC100248694
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100248694
product: RNA pseudouridine synthase 6, chloroplastic, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_019222766.1
SIO_010081: LOC100248694
subclass of: SO_0000673
so part of: LOC100248694
location: complement(join(354382..354491,354594..354947,355477..355646,356163..356274,356419..356473,356550..356665,358516..358597,358683..358937,359065..359193,360254..360499))
location: region:354382-360499:-1
so has part: feature:360254-360499:-1:exon
so has part: feature:359065-359193:-1:exon
so has part: feature:358683-358937:-1:exon
so has part: feature:358516-358597:-1:exon
so has part: feature:356550-356665:-1:exon
so has part: feature:356419-356473:-1:exon
so has part: feature:356163-356274:-1:exon
so has part: feature:355477-355646:-1:exon
so has part: feature:354594-354947:-1:exon
so has part: feature:354382-354491:-1:exon

position:360499:-1
position: 360499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360254-360499:-1:exon

position:360254:-1
position: 360254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:359065-359193:-1:exon

position:359065:-1
position: 359065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359193:-1
position: 359193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:358683-358937:-1:exon

position:358683:-1
position: 358683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358937:-1
position: 358937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:358516-358597:-1:exon

position:358516:-1
position: 358516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358597:-1
position: 358597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:356550-356665:-1:exon

position:356550:-1
position: 356550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356665:-1
position: 356665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:356419-356473:-1:exon

position:356419:-1
position: 356419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356473:-1
position: 356473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:356163-356274:-1:exon

position:356163:-1
position: 356163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356274:-1
position: 356274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:355477-355646:-1:exon

position:355477:-1
position: 355477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355646:-1
position: 355646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:354594-354947:-1:exon

position:354594:-1
position: 354594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354947:-1
position: 354947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:354382-354491:-1:exon

position:354491:-1
position: 354491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100248694
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100248694
product: RNA pseudouridine synthase 6, chloroplastic, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_019222767.1
SIO_010081: LOC100248694
subclass of: SO_0000673
so part of: LOC100248694
location: complement(join(354654..354947,355477..355646,356163..356274,356419..356473,356550..356665,358516..358597,358683..358937,360254..360500))
location: region:354654-360500:-1
so has part: feature:360254-360500:-1:exon
so has part: feature:358683-358937:-1:exon
so has part: feature:358516-358597:-1:exon
so has part: feature:356550-356665:-1:exon
so has part: feature:356419-356473:-1:exon
so has part: feature:356163-356274:-1:exon
so has part: feature:355477-355646:-1:exon
so has part: feature:354654-354947:-1:exon

position:354654:-1
position: 354654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360254-360500:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:358683-358937:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:358516-358597:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:356550-356665:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:356419-356473:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:356163-356274:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:355477-355646:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:354654-354947:-1:exon

LOC100248694
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100248694
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA pseudouridine synthase 6, chloroplastic isoform X2
translation: MGTAILTSIFTSGLVSSLWNSNCRSFGTPVALARTLASSNVFSRRHKRVVWCSNNPTCTRELTASSDSANTSSVNGFVADLIHFGAVYYALVCPEPPPSATPEQVRLFKEVTAPSVLRKRPSIKGKTIREAQKTFRITDVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLTTPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYRALAAAPMPIGIVTHYMRPVNIAPRLISEDFIKGWYLCQLEVLECKEVPWPSTLIEEKYCIEDRGWPLKNSAFKCKINLLTGRTHQIRAQLAACGAPIVGDSMYMPAAIAEITSPGLNPFGKYKKKYTTENDRETAVAEWIAQHGKEPGVAIGLQACQISWDDGEHFYKAGSPWWM
SIO_010081: LOC100248694
subclass of: SO_0000673
so part of: LOC100248694
location: complement(join(354675..354947,355477..355646,356163..356274,356419..356473,356550..356665,358516..358597,358683..358937,360254..360480))
location: region:354675-360480:-1
so has part: feature:360254-360480:-1:exon
so has part: feature:358683-358937:-1:exon
so has part: feature:358516-358597:-1:exon
so has part: feature:356550-356665:-1:exon
so has part: feature:356419-356473:-1:exon
so has part: feature:356163-356274:-1:exon
so has part: feature:355477-355646:-1:exon
so has part: feature:354675-354947:-1:exon

XP_019078312.1
type: Protein
SIO_000068: ncbiprotein

position:354675:-1
position: 354675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360480:-1
position: 360480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360254-360480:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:358683-358937:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:358516-358597:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:356550-356665:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:356419-356473:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:356163-356274:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:355477-355646:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:354675-354947:-1:exon

LOC100248694
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100248694
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA pseudouridine synthase 6, chloroplastic isoform X1
translation: MGTAILTSIFTSGLVSSLWNSNCRSFGTPVALARTLASSNVFSRRHKRVVWCSNNPTCTRELTASSDSANTSSVNGYPEYHRLLPCPSQNGPPRVEHLVVSEGGCVLDYISKALDLPPLFVADLIHFGAVYYALVCPEPPPSATPEQVRLFKEVTAPSVLRKRPSIKGKTIREAQKTFRITDVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLTTPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYRALAAAPMPIGIVTHYMRPVNIAPRLISEDFIKGWYLCQLEVLECKEVPWPSTLIEEKYCIEDRGWPLKNSAFKCKINLLTGRTHQIRAQLAACGAPIVGDSMYMPAAIAEITSPGLNPFGKYKKKYTTENDRETAVAEWIAQHGKEPGVAIGLQACQISWDDGEHFYKAGSPWWM
SIO_010081: LOC100248694
subclass of: SO_0000673
so part of: LOC100248694
location: complement(join(354675..354947,355477..355646,356163..356274,356419..356473,356550..356665,358516..358597,358683..358937,359065..359193,360254..360480))
location: region:354675-360480:-1
so has part: feature:360254-360480:-1:exon
so has part: feature:359065-359193:-1:exon
so has part: feature:358683-358937:-1:exon
so has part: feature:358516-358597:-1:exon
so has part: feature:356550-356665:-1:exon
so has part: feature:356419-356473:-1:exon
so has part: feature:356163-356274:-1:exon
so has part: feature:355477-355646:-1:exon
so has part: feature:354675-354947:-1:exon

XP_019078311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:360254-360480:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359065-359193:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:358683-358937:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:358516-358597:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:356550-356665:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:356419-356473:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:356163-356274:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:355477-355646:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:354675-354947:-1:exon

LOC100246851
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100246851
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 364160..366244
location: region:364160-366244:1
so has part: feature:364160-366244:1:exon
subclass of: SO_0000010

100246851
type: Gene
SIO_000068: ncbigene

position:364160:1
position: 364160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366244:1
position: 366244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364160-366244:1:exon

LOC100246851
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100246851
product: cytochrome P450 77A1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_002265875.3
SIO_010081: LOC100246851
subclass of: SO_0000673
so part of: LOC100246851
location: 364160..366244
location: region:364160-366244:1
so has part: feature:364160-366244:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:364160-366244:1:exon

LOC100246851
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100246851
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome P450 77A1
translation: MELTDLLLLSLALIFLRFWWRYWSVTGGGPKNLPPGPPGWPLVGNLVQVILQRRPFIYVVRDLRAKYGPIFTLQMGQRTLVIVTSSELIHEALVQRGPIFASRPEDSPTRLVFSVGKCAINSAQYGPLWRTLRRNFVAELITPTRIRQCSWIRKWALENHMRRLQMEVSEKGFVEVMSNCRLTICSILICICFGAKISERRIKEIESVLKDVMLMTTPKLPDFLPVLTPLLRRQLREAKELRKKQMECMVPLVRSRRAFVESKGAPGRSSSEMVSPIGAAYIDSLFGLEPAERGRLGEEELVTLCSEIINAGTDTSATTVEWALLHLVMNQDIQQKLYKEIIDCVGKNGVVTEGDVEKMPYLGAIVKETFRRHPPSHFVLSHAATKDTELGGYTIPADVNVEFYTAWVTEDPDLWQDPAEFRPERFLQGDGVNVDVTGTRGVKMVPFGAGRRICPAMNLGTLHVNLLIARMIHAFKWIPAPGSPPDPTETFAFTVVMKNPLKAIILPR
SIO_010081: LOC100246851
subclass of: SO_0000673
so part of: LOC100246851
location: 364438..365964
location: region:364438-365964:1
so has part: feature:364438-365964:1:exon

XP_002265911.1
type: Protein
SIO_000068: ncbiprotein

position:364438:1
position: 364438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365964:1
position: 365964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364438-365964:1:exon

LOC104880453
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC104880453
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(366346..374976)
location: region:366346-374976:-1
so has part: feature:366346-374976:-1:exon
subclass of: SO_0000010

104880453
type: Gene
SIO_000068: ncbigene

position:366346:-1
position: 366346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374976:-1
position: 374976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366346-374976:-1:exon

LOC104880453
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104880453
product: glutamate receptor 3.7-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019222596.1
SIO_010081: LOC104880453
subclass of: SO_0000673
so part of: LOC104880453
location: complement(join(366346..367892,368144..368294,369633..369765,370215..370247,370421..370558,370947..371242,374496..374976))
location: region:366346-374976:-1
so has part: feature:374496-374976:-1:exon
so has part: feature:370947-371242:-1:exon
so has part: feature:370421-370558:-1:exon
so has part: feature:370215-370247:-1:exon
so has part: feature:369633-369765:-1:exon
so has part: feature:368144-368294:-1:exon
so has part: feature:366346-367892:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:374496-374976:-1:exon

position:374496:-1
position: 374496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:370947-371242:-1:exon

position:370947:-1
position: 370947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371242:-1
position: 371242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:370421-370558:-1:exon

position:370421:-1
position: 370421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370558:-1
position: 370558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:370215-370247:-1:exon

position:370215:-1
position: 370215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370247:-1
position: 370247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:369633-369765:-1:exon

position:369633:-1
position: 369633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369765:-1
position: 369765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:368144-368294:-1:exon

position:368144:-1
position: 368144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368294:-1
position: 368294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:366346-367892:-1:exon

position:367892:-1
position: 367892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104880453
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104880453
product: glutamate receptor 3.7-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_010657056.2
SIO_010081: LOC104880453
subclass of: SO_0000673
so part of: LOC104880453
location: complement(join(366346..367892,368144..368294,369683..369765,370215..370247,370421..370558,370947..371242,374496..374975))
location: region:366346-374975:-1
so has part: feature:374496-374975:-1:exon
so has part: feature:370947-371242:-1:exon
so has part: feature:370421-370558:-1:exon
so has part: feature:370215-370247:-1:exon
so has part: feature:369683-369765:-1:exon
so has part: feature:368144-368294:-1:exon
so has part: feature:366346-367892:-1:exon

position:374975:-1
position: 374975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374496-374975:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:370947-371242:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370421-370558:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:370215-370247:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:369683-369765:-1:exon

position:369683:-1
position: 369683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:368144-368294:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:366346-367892:-1:exon

LOC104880453
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104880453
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor 3.7-like isoform X2
translation: MGISNSHKIKGHRMDMDAASKLVSYEVPYTLVAIAYGQFNLRPFTVEMWCATAVLFEFFALIGVVIGLLDHQLNNNLSSPPKLATISLISFSTMFKGNQNTKRSLDASFLSKGNKDATQIGRVLEPGLVS
SIO_010081: LOC104880453
subclass of: SO_0000673
so part of: LOC104880453
location: complement(join(368281..368294,369683..369765,370215..370247,370421..370558,370947..371071))
location: region:368281-371071:-1
so has part: feature:370947-371071:-1:exon
so has part: feature:370421-370558:-1:exon
so has part: feature:370215-370247:-1:exon
so has part: feature:369683-369765:-1:exon
so has part: feature:368281-368294:-1:exon

XP_010655358.1
type: Protein
SIO_000068: ncbiprotein

position:368281:-1
position: 368281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371071:-1
position: 371071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370947-371071:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:370421-370558:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370215-370247:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:369683-369765:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:368281-368294:-1:exon

LOC104880453
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104880453
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor 3.7-like isoform X1
translation: MGISNSHKIKGHRMDMDAASKLVSYEVPYTLVAIAYGQFNLRPFTVEMWCATAVLFEFFALIGVVIGLLDHQLNNNLSSPPKLATISLISFSTMFKGNQNTKRSLDASFLSKGNKDATQIGRVLEPGFILYLIGCILQFSEFMV
SIO_010081: LOC104880453
subclass of: SO_0000673
so part of: LOC104880453
location: complement(join(368289..368294,369633..369765,370215..370247,370421..370558,370947..371071))
location: region:368289-371071:-1
so has part: feature:370947-371071:-1:exon
so has part: feature:370421-370558:-1:exon
so has part: feature:370215-370247:-1:exon
so has part: feature:369633-369765:-1:exon
so has part: feature:368289-368294:-1:exon

XP_019078141.1
type: Protein
SIO_000068: ncbiprotein

position:368289:-1
position: 368289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370947-371071:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:370421-370558:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370215-370247:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:369633-369765:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:368289-368294:-1:exon

LOC100252204
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100252204
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 378049..381231
location: region:378049-381231:1
so has part: feature:378049-381231:1:exon
subclass of: SO_0000010

100252204
type: Gene
SIO_000068: ncbigene

position:378049:1
position: 378049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381231:1
position: 381231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378049-381231:1:exon

LOC100252204
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100252204
product: adenosine deaminase-like protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_010657057.2
SIO_010081: LOC100252204
subclass of: SO_0000673
so part of: LOC100252204
location: join(378049..378224,378335..378405,378768..378859,379069..379128,379259..379468,379553..379629,379724..379793,380390..380456,380584..380688,380781..380924,381001..381231)
location: region:378049-381231:1
so has part: feature:378049-378224:1:exon
so has part: feature:378335-378405:1:exon
so has part: feature:378768-378859:1:exon
so has part: feature:379069-379128:1:exon
so has part: feature:379259-379468:1:exon
so has part: feature:379553-379629:1:exon
so has part: feature:379724-379793:1:exon
so has part: feature:380390-380456:1:exon
so has part: feature:380584-380688:1:exon
so has part: feature:380781-380924:1:exon
so has part: feature:381001-381231:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:378049-378224:1:exon

position:378224:1
position: 378224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:378335-378405:1:exon

position:378335:1
position: 378335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378405:1
position: 378405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:378768-378859:1:exon

position:378768:1
position: 378768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378859:1
position: 378859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:379069-379128:1:exon

position:379069:1
position: 379069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379128:1
position: 379128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:379259-379468:1:exon

position:379259:1
position: 379259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379468:1
position: 379468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:379553-379629:1:exon

position:379553:1
position: 379553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379629:1
position: 379629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:379724-379793:1:exon

position:379724:1
position: 379724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379793:1
position: 379793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:380390-380456:1:exon

position:380390:1
position: 380390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380456:1
position: 380456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:380584-380688:1:exon

position:380584:1
position: 380584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380688:1
position: 380688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:380781-380924:1:exon

position:380781:1
position: 380781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380924:1
position: 380924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:381001-381231:1:exon

position:381001:1
position: 381001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100252204
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100252204
product: adenosine deaminase-like protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 246 samples with support for all annotated introns
transcript id: XM_002265795.4
SIO_010081: LOC100252204
subclass of: SO_0000673
so part of: LOC100252204
location: join(378050..378224,378335..378405,378768..378859,379069..379128,379259..379468,379553..379629,379724..379793,379878..379991,380390..380456,380584..380688,380781..380924,381001..381231)
location: region:378050-381231:1
so has part: feature:378050-378224:1:exon
so has part: feature:378335-378405:1:exon
so has part: feature:378768-378859:1:exon
so has part: feature:379069-379128:1:exon
so has part: feature:379259-379468:1:exon
so has part: feature:379553-379629:1:exon
so has part: feature:379724-379793:1:exon
so has part: feature:379878-379991:1:exon
so has part: feature:380390-380456:1:exon
so has part: feature:380584-380688:1:exon
so has part: feature:380781-380924:1:exon
so has part: feature:381001-381231:1:exon

position:378050:1
position: 378050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378050-378224:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:378335-378405:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:378768-378859:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:379069-379128:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:379259-379468:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379553-379629:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:379724-379793:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:379878-379991:1:exon

position:379878:1
position: 379878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379991:1
position: 379991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:380390-380456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:380584-380688:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:380781-380924:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:381001-381231:1:exon

LOC100252204
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100252204
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenosine deaminase-like protein isoform X1
translation: MEREMEWWISMPKVELHAHLNGSIRDSTLLELAKALGEKGVILFSDVEHVIRKNDRSLNEVFKLFDLIHIITTDHTTVTRITKEVVEDFASENVIYLELRTTPKRNESIGMSKRSYMEAVVKGLRAVDAVDVNFAPHYLGEGNDICNGTTKKKIFVRLLLSIDRRETTADAMETVKLALEMRDQGVVGIDLSGNPTVGDWMTFLPALKFAREQGLSITLHCGEVPNPKEIQAMLEFLPERVGHACFFKEDHWENAKSSKIPVEICLTSNIRTGSISSLDVHHFGDLYHAKHPLILCTDDSGIFSTSLSGEYILAASSFGLGKKEMLELGRNAIEFIFADDEIKRELREAFDSAAGTLEL
SIO_010081: LOC100252204
subclass of: SO_0000673
so part of: LOC100252204
location: join(378136..378224,378335..378405,378768..378859,379069..379128,379259..379468,379553..379629,379724..379793,379878..379991,380390..380456,380584..380688,380781..380905)
location: region:378136-380905:1
so has part: feature:378136-378224:1:exon
so has part: feature:378335-378405:1:exon
so has part: feature:378768-378859:1:exon
so has part: feature:379069-379128:1:exon
so has part: feature:379259-379468:1:exon
so has part: feature:379553-379629:1:exon
so has part: feature:379724-379793:1:exon
so has part: feature:379878-379991:1:exon
so has part: feature:380390-380456:1:exon
so has part: feature:380584-380688:1:exon
so has part: feature:380781-380905:1:exon

XP_002265831.2
type: Protein
SIO_000068: ncbiprotein

position:378136:1
position: 378136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380905:1
position: 380905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378136-378224:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:378335-378405:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:378768-378859:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:379069-379128:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:379259-379468:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379553-379629:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:379724-379793:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:379878-379991:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:380390-380456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:380584-380688:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:380781-380905:1:exon

LOC100252204
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100252204
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenosine deaminase-like protein isoform X2
translation: MEREMEWWISMPKVELHAHLNGSIRDSTLLELAKALGEKGVILFSDVEHVIRKNDRSLNEVFKLFDLIHIITTDHTTVTRITKEVVEDFASENVIYLELRTTPKRNESIGMSKRSYMEAVVKGLRAVDAVDVNFAPHYLGEGNDICNGTTKKKIFVRLLLSIDRRETTADAMETVKLALEMRDQGVVGIDLSGNPTVGDWMTFLPALKFAREQGLSITLHCGEVEICLTSNIRTGSISSLDVHHFGDLYHAKHPLILCTDDSGIFSTSLSGEYILAASSFGLGKKEMLELGRNAIEFIFADDEIKRELREAFDSAAGTLEL
SIO_010081: LOC100252204
subclass of: SO_0000673
so part of: LOC100252204
location: join(378136..378224,378335..378405,378768..378859,379069..379128,379259..379468,379553..379629,379724..379793,380390..380456,380584..380688,380781..380905)
location: region:378136-380905:1
so has part: feature:378136-378224:1:exon
so has part: feature:378335-378405:1:exon
so has part: feature:378768-378859:1:exon
so has part: feature:379069-379128:1:exon
so has part: feature:379259-379468:1:exon
so has part: feature:379553-379629:1:exon
so has part: feature:379724-379793:1:exon
so has part: feature:380390-380456:1:exon
so has part: feature:380584-380688:1:exon
so has part: feature:380781-380905:1:exon

XP_010655359.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:378136-378224:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:378335-378405:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:378768-378859:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:379069-379128:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:379259-379468:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379553-379629:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:379724-379793:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:380390-380456:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:380584-380688:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:380781-380905:1:exon

LOC104880454
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC104880454
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 382732..390680
location: region:382732-390680:1
so has part: feature:382732-390680:1:exon
subclass of: SO_0000010

104880454
type: Gene
SIO_000068: ncbigene

position:382732:1
position: 382732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390680:1
position: 390680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382732-390680:1:exon

LOC104880454
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104880454
product: phospholipase A I, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_019222598.1
SIO_010081: LOC104880454
subclass of: SO_0000673
so part of: LOC104880454
location: join(382732..382840,382980..383546,384142..384289,384475..384553,384672..384825,384932..385141,385235..385480,385575..385737,385828..386088,386168..386289,386449..386610,386757..386949,387103..387239,387659..387797,388071..388265,388401..388872,388964..389180,389252..389341,389981..390680)
location: region:382732-390680:1
so has part: feature:382732-382840:1:exon
so has part: feature:382980-383546:1:exon
so has part: feature:384142-384289:1:exon
so has part: feature:384475-384553:1:exon
so has part: feature:384672-384825:1:exon
so has part: feature:384932-385141:1:exon
so has part: feature:385235-385480:1:exon
so has part: feature:385575-385737:1:exon
so has part: feature:385828-386088:1:exon
so has part: feature:386168-386289:1:exon
so has part: feature:386449-386610:1:exon
so has part: feature:386757-386949:1:exon
so has part: feature:387103-387239:1:exon
so has part: feature:387659-387797:1:exon
so has part: feature:388071-388265:1:exon
so has part: feature:388401-388872:1:exon
so has part: feature:388964-389180:1:exon
so has part: feature:389252-389341:1:exon
so has part: feature:389981-390680:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:382732-382840:1:exon

position:382840:1
position: 382840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:382980-383546:1:exon

position:382980:1
position: 382980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383546:1
position: 383546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:384142-384289:1:exon

position:384142:1
position: 384142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384289:1
position: 384289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:384475-384553:1:exon

position:384475:1
position: 384475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384553:1
position: 384553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:384672-384825:1:exon

position:384672:1
position: 384672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384825:1
position: 384825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:384932-385141:1:exon

position:384932:1
position: 384932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385141:1
position: 385141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:385235-385480:1:exon

position:385235:1
position: 385235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385480:1
position: 385480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:385575-385737:1:exon

position:385575:1
position: 385575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385737:1
position: 385737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:385828-386088:1:exon

position:385828:1
position: 385828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386088:1
position: 386088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:386168-386289:1:exon

position:386168:1
position: 386168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386289:1
position: 386289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:386449-386610:1:exon

position:386449:1
position: 386449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386610:1
position: 386610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:386757-386949:1:exon

position:386757:1
position: 386757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386949:1
position: 386949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:387103-387239:1:exon

position:387103:1
position: 387103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387239:1
position: 387239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:387659-387797:1:exon

position:387659:1
position: 387659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387797:1
position: 387797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:388071-388265:1:exon

position:388071:1
position: 388071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388265:1
position: 388265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:388401-388872:1:exon

position:388401:1
position: 388401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388872:1
position: 388872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:388964-389180:1:exon

position:388964:1
position: 388964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389180:1
position: 389180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:389252-389341:1:exon

position:389252:1
position: 389252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389341:1
position: 389341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:389981-390680:1:exon

position:389981:1
position: 389981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104880454
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104880454
product: phospholipase A I, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 119 samples with support for all annotated introns
transcript id: XM_010657058.2
SIO_010081: LOC104880454
subclass of: SO_0000673
so part of: LOC104880454
location: join(382753..383546,384142..384289,384475..384553,384672..384825,384932..385141,385235..385480,385575..385737,385828..386088,386168..386289,386449..386610,386757..386949,387103..387239,387659..387797,388071..388265,388401..388872,388964..389180,389252..389341,389981..390680)
location: region:382753-390680:1
so has part: feature:382753-383546:1:exon
so has part: feature:384142-384289:1:exon
so has part: feature:384475-384553:1:exon
so has part: feature:384672-384825:1:exon
so has part: feature:384932-385141:1:exon
so has part: feature:385235-385480:1:exon
so has part: feature:385575-385737:1:exon
so has part: feature:385828-386088:1:exon
so has part: feature:386168-386289:1:exon
so has part: feature:386449-386610:1:exon
so has part: feature:386757-386949:1:exon
so has part: feature:387103-387239:1:exon
so has part: feature:387659-387797:1:exon
so has part: feature:388071-388265:1:exon
so has part: feature:388401-388872:1:exon
so has part: feature:388964-389180:1:exon
so has part: feature:389252-389341:1:exon
so has part: feature:389981-390680:1:exon

position:382753:1
position: 382753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382753-383546:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:384142-384289:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:384475-384553:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384672-384825:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384932-385141:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:385235-385480:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:385575-385737:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:385828-386088:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:386168-386289:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:386449-386610:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:386757-386949:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:387103-387239:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:387659-387797:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:388071-388265:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:388401-388872:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:388964-389180:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:389252-389341:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:389981-390680:1:exon

LOC104880454
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104880454
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipase A I isoform X1
translation: MVQFSHHRCSRSIEKMSWGLGWKRPSEIFHLTLNYSGGDEAVEDPGRSSSEDQESGFRIELDWTAGDDEDQVALRLQSQLMVALPMPQDSVVVQLKEGEGGGDNVGVDMKVVKRRDPLRVVKMSKTVGSGQQSDGIGVVTRLMRSTVKDGVAACNEHWNNVTVLNFCGCSLSVFPVEFTQLMLLEKLCLDNNKLSVLPSELGKLKNLKVLRVDNNMLVSVPVELRQCVELVELSLEHNKLVRPLLDFRAMAELRVLRLFGNPLEFLPEILPLHKLRHLSLANIRIVADELLRSVNVQIEMENSSYFIASRHRLSAFFSLIFRFSSCHHPLLASALAKIMQDEGNRAVVGKDENAMRQLISMISSDNRHVVEQACSALSSLAMDVPVAMQLMKSDIMQPIQRVLKSVAPEELISVLQVVVNLAFASDMVAQKMLTKDVLKSLKLLCAHKNPEVQKLALLAVGNLAFCLENRRTLVTSESLRELLLHLMVVPEPRVNKAAARALAIFGENENLRRAIRGRQVGKKGLRILSMDGGGMKGLGTVQVLKEIEKGTGKRIHELFDLICGTSTGGMLAIALGIKQMTLDQCEEIYKNLGKLVFTDPVPKDNEAATWREKLDQLYKSSSQSFRVVVHGSKHSADQFERLLKEMCADEEGDLLIESAVKNIPKVFVVSTLVSVIPAQPFLFRNYQYPVGTPEIPLAIPESSAISGLGATSTGAQVGYKRSAFIGSCKHHIWQAIRASSAAPYYLDDFSDDMNRWQDGAIVANNPTVFSMREAQLLWPDTRIDTLVSIGCGSVPTKVRKGGWRYLDTGQVLIESACSVDRVEEALSTLLPMLPEIHYFRFNPVDERCDMELDETDPAVWLKLEAATEEYIQNNSQAFKNVCERLQPDEKWSENLKPQYVHKTKASNTDDSSPSLGWRRNVLLVEASYSPDSGRVVHHARSLETFCAHNGIRFSLMNGILENAKAVPGTAFPTPFTSPLFTGSFPSSPLLYSPDVGPQRVGRIDLVPPLSLDGFQSGKTTSHPNSPSGPRQLSLPVQSLHEKLQNSPQVGIIHLALQNDSLGSILSWQKDVFVVAEPGELADKFLQSVKFSLLSVMRAHRRRDASVLAGISTIADMVARRPCFQIGGIVHRYIGRQTQVMEDDQEIGAYMFRRTVPSLHLTADDVRWMVGAWRDRIIICTGTYGPTSTLIKAFLDSGAKAVICPSVEPPETQSVAFHGSGEFNYGENGKFEIGEEEAEDEEAELSTPVSDWEDSDAEKNGENFMQFWDDDEAELSQFICQLYDSLFREGSTVDDALQHALAAHRKLRYSCHLPSIL
SIO_010081: LOC104880454
subclass of: SO_0000673
so part of: LOC104880454
location: join(383031..383546,384142..384289,384475..384553,384672..384825,384932..385141,385235..385480,385575..385737,385828..386088,386168..386289,386449..386610,386757..386949,387103..387239,387659..387797,388071..388265,388401..388872,388964..389180,389252..389341,389981..390427)
location: region:383031-390427:1
so has part: feature:383031-383546:1:exon
so has part: feature:384142-384289:1:exon
so has part: feature:384475-384553:1:exon
so has part: feature:384672-384825:1:exon
so has part: feature:384932-385141:1:exon
so has part: feature:385235-385480:1:exon
so has part: feature:385575-385737:1:exon
so has part: feature:385828-386088:1:exon
so has part: feature:386168-386289:1:exon
so has part: feature:386449-386610:1:exon
so has part: feature:386757-386949:1:exon
so has part: feature:387103-387239:1:exon
so has part: feature:387659-387797:1:exon
so has part: feature:388071-388265:1:exon
so has part: feature:388401-388872:1:exon
so has part: feature:388964-389180:1:exon
so has part: feature:389252-389341:1:exon
so has part: feature:389981-390427:1:exon

XP_019078143.1
type: Protein
SIO_000068: ncbiprotein

position:383031:1
position: 383031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390427:1
position: 390427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383031-383546:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:384142-384289:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:384475-384553:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384672-384825:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384932-385141:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:385235-385480:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:385575-385737:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:385828-386088:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:386168-386289:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:386449-386610:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:386757-386949:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:387103-387239:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:387659-387797:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:388071-388265:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:388401-388872:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:388964-389180:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:389252-389341:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:389981-390427:1:exon

LOC104880454
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104880454
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipase A I isoform X1
translation: MVQFSHHRCSRSIEKMSWGLGWKRPSEIFHLTLNYSGGDEAVEDPGRSSSEDQESGFRIELDWTAGDDEDQVALRLQSQLMVALPMPQDSVVVQLKEGEGGGDNVGVDMKVVKRRDPLRVVKMSKTVGSGQQSDGIGVVTRLMRSTVKDGVAACNEHWNNVTVLNFCGCSLSVFPVEFTQLMLLEKLCLDNNKLSVLPSELGKLKNLKVLRVDNNMLVSVPVELRQCVELVELSLEHNKLVRPLLDFRAMAELRVLRLFGNPLEFLPEILPLHKLRHLSLANIRIVADELLRSVNVQIEMENSSYFIASRHRLSAFFSLIFRFSSCHHPLLASALAKIMQDEGNRAVVGKDENAMRQLISMISSDNRHVVEQACSALSSLAMDVPVAMQLMKSDIMQPIQRVLKSVAPEELISVLQVVVNLAFASDMVAQKMLTKDVLKSLKLLCAHKNPEVQKLALLAVGNLAFCLENRRTLVTSESLRELLLHLMVVPEPRVNKAAARALAIFGENENLRRAIRGRQVGKKGLRILSMDGGGMKGLGTVQVLKEIEKGTGKRIHELFDLICGTSTGGMLAIALGIKQMTLDQCEEIYKNLGKLVFTDPVPKDNEAATWREKLDQLYKSSSQSFRVVVHGSKHSADQFERLLKEMCADEEGDLLIESAVKNIPKVFVVSTLVSVIPAQPFLFRNYQYPVGTPEIPLAIPESSAISGLGATSTGAQVGYKRSAFIGSCKHHIWQAIRASSAAPYYLDDFSDDMNRWQDGAIVANNPTVFSMREAQLLWPDTRIDTLVSIGCGSVPTKVRKGGWRYLDTGQVLIESACSVDRVEEALSTLLPMLPEIHYFRFNPVDERCDMELDETDPAVWLKLEAATEEYIQNNSQAFKNVCERLQPDEKWSENLKPQYVHKTKASNTDDSSPSLGWRRNVLLVEASYSPDSGRVVHHARSLETFCAHNGIRFSLMNGILENAKAVPGTAFPTPFTSPLFTGSFPSSPLLYSPDVGPQRVGRIDLVPPLSLDGFQSGKTTSHPNSPSGPRQLSLPVQSLHEKLQNSPQVGIIHLALQNDSLGSILSWQKDVFVVAEPGELADKFLQSVKFSLLSVMRAHRRRDASVLAGISTIADMVARRPCFQIGGIVHRYIGRQTQVMEDDQEIGAYMFRRTVPSLHLTADDVRWMVGAWRDRIIICTGTYGPTSTLIKAFLDSGAKAVICPSVEPPETQSVAFHGSGEFNYGENGKFEIGEEEAEDEEAELSTPVSDWEDSDAEKNGENFMQFWDDDEAELSQFICQLYDSLFREGSTVDDALQHALAAHRKLRYSCHLPSIL
SIO_010081: LOC104880454
subclass of: SO_0000673
so part of: LOC104880454
location: join(383031..383546,384142..384289,384475..384553,384672..384825,384932..385141,385235..385480,385575..385737,385828..386088,386168..386289,386449..386610,386757..386949,387103..387239,387659..387797,388071..388265,388401..388872,388964..389180,389252..389341,389981..390427)
location: region:383031-390427:1
so has part: feature:383031-383546:1:exon
so has part: feature:384142-384289:1:exon
so has part: feature:384475-384553:1:exon
so has part: feature:384672-384825:1:exon
so has part: feature:384932-385141:1:exon
so has part: feature:385235-385480:1:exon
so has part: feature:385575-385737:1:exon
so has part: feature:385828-386088:1:exon
so has part: feature:386168-386289:1:exon
so has part: feature:386449-386610:1:exon
so has part: feature:386757-386949:1:exon
so has part: feature:387103-387239:1:exon
so has part: feature:387659-387797:1:exon
so has part: feature:388071-388265:1:exon
so has part: feature:388401-388872:1:exon
so has part: feature:388964-389180:1:exon
so has part: feature:389252-389341:1:exon
so has part: feature:389981-390427:1:exon

XP_010655360.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:383031-383546:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:384142-384289:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:384475-384553:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384672-384825:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384932-385141:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:385235-385480:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:385575-385737:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:385828-386088:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:386168-386289:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:386449-386610:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:386757-386949:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:387103-387239:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:387659-387797:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:388071-388265:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:388401-388872:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:388964-389180:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:389252-389341:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:389981-390427:1:exon

LOC104880454
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104880454
product: phospholipase A I, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 78 samples with support for all annotated introns
transcript id: XM_010657059.2
SIO_010081: LOC104880454
subclass of: SO_0000673
so part of: LOC104880454
location: join(384274..384289,384475..384553,384661..384825,384932..385141,385235..385480,385575..385737,385828..386088,386168..386289,386449..386610,386757..386949,387103..387239,387659..387797,388071..388265,388401..388872,388964..389180,389252..389341,389981..390680)
location: region:384274-390680:1
so has part: feature:384274-384289:1:exon
so has part: feature:384475-384553:1:exon
so has part: feature:384661-384825:1:exon
so has part: feature:384932-385141:1:exon
so has part: feature:385235-385480:1:exon
so has part: feature:385575-385737:1:exon
so has part: feature:385828-386088:1:exon
so has part: feature:386168-386289:1:exon
so has part: feature:386449-386610:1:exon
so has part: feature:386757-386949:1:exon
so has part: feature:387103-387239:1:exon
so has part: feature:387659-387797:1:exon
so has part: feature:388071-388265:1:exon
so has part: feature:388401-388872:1:exon
so has part: feature:388964-389180:1:exon
so has part: feature:389252-389341:1:exon
so has part: feature:389981-390680:1:exon

position:384274:1
position: 384274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384274-384289:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:384475-384553:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:384661-384825:1:exon

position:384661:1
position: 384661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:384932-385141:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:385235-385480:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:385575-385737:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:385828-386088:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:386168-386289:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:386449-386610:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:386757-386949:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:387103-387239:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:387659-387797:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:388071-388265:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:388401-388872:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:388964-389180:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:389252-389341:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:389981-390680:1:exon

LOC104880454
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104880454
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipase A I isoform X2
translation: MAELRVLRLFGNPLEFLPEILPLHKLRHLSLANIRIVADELLRSVNVQIEMENSSYFIASRHRLSAFFSLIFRFSSCHHPLLASALAKIMQDEGNRAVVGKDENAMRQLISMISSDNRHVVEQACSALSSLAMDVPVAMQLMKSDIMQPIQRVLKSVAPEELISVLQVVVNLAFASDMVAQKMLTKDVLKSLKLLCAHKNPEVQKLALLAVGNLAFCLENRRTLVTSESLRELLLHLMVVPEPRVNKAAARALAIFGENENLRRAIRGRQVGKKGLRILSMDGGGMKGLGTVQVLKEIEKGTGKRIHELFDLICGTSTGGMLAIALGIKQMTLDQCEEIYKNLGKLVFTDPVPKDNEAATWREKLDQLYKSSSQSFRVVVHGSKHSADQFERLLKEMCADEEGDLLIESAVKNIPKVFVVSTLVSVIPAQPFLFRNYQYPVGTPEIPLAIPESSAISGLGATSTGAQVGYKRSAFIGSCKHHIWQAIRASSAAPYYLDDFSDDMNRWQDGAIVANNPTVFSMREAQLLWPDTRIDTLVSIGCGSVPTKVRKGGWRYLDTGQVLIESACSVDRVEEALSTLLPMLPEIHYFRFNPVDERCDMELDETDPAVWLKLEAATEEYIQNNSQAFKNVCERLQPDEKWSENLKPQYVHKTKASNTDDSSPSLGWRRNVLLVEASYSPDSGRVVHHARSLETFCAHNGIRFSLMNGILENAKAVPGTAFPTPFTSPLFTGSFPSSPLLYSPDVGPQRVGRIDLVPPLSLDGFQSGKTTSHPNSPSGPRQLSLPVQSLHEKLQNSPQVGIIHLALQNDSLGSILSWQKDVFVVAEPGELADKFLQSVKFSLLSVMRAHRRRDASVLAGISTIADMVARRPCFQIGGIVHRYIGRQTQVMEDDQEIGAYMFRRTVPSLHLTADDVRWMVGAWRDRIIICTGTYGPTSTLIKAFLDSGAKAVICPSVEPPETQSVAFHGSGEFNYGENGKFEIGEEEAEDEEAELSTPVSDWEDSDAEKNGENFMQFWDDDEAELSQFICQLYDSLFREGSTVDDALQHALAAHRKLRYSCHLPSIL
SIO_010081: LOC104880454
subclass of: SO_0000673
so part of: LOC104880454
location: join(384676..384825,384932..385141,385235..385480,385575..385737,385828..386088,386168..386289,386449..386610,386757..386949,387103..387239,387659..387797,388071..388265,388401..388872,388964..389180,389252..389341,389981..390427)
location: region:384676-390427:1
so has part: feature:384676-384825:1:exon
so has part: feature:384932-385141:1:exon
so has part: feature:385235-385480:1:exon
so has part: feature:385575-385737:1:exon
so has part: feature:385828-386088:1:exon
so has part: feature:386168-386289:1:exon
so has part: feature:386449-386610:1:exon
so has part: feature:386757-386949:1:exon
so has part: feature:387103-387239:1:exon
so has part: feature:387659-387797:1:exon
so has part: feature:388071-388265:1:exon
so has part: feature:388401-388872:1:exon
so has part: feature:388964-389180:1:exon
so has part: feature:389252-389341:1:exon
so has part: feature:389981-390427:1:exon

XP_010655361.1
type: Protein
SIO_000068: ncbiprotein

position:384676:1
position: 384676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384676-384825:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:384932-385141:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:385235-385480:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:385575-385737:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:385828-386088:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:386168-386289:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:386449-386610:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:386757-386949:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:387103-387239:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:387659-387797:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:388071-388265:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:388401-388872:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:388964-389180:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:389252-389341:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:389981-390427:1:exon

LOC100258941
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100258941
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 392286..393515
location: region:392286-393515:1
so has part: feature:392286-393515:1:exon
subclass of: SO_0000010

100258941
type: Gene
SIO_000068: ncbigene

position:392286:1
position: 392286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393515:1
position: 393515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392286-393515:1:exon

LOC100258941
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100258941
product: uncharacterized LOC100258941
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010657060.2
SIO_010081: LOC100258941
subclass of: SO_0000673
so part of: LOC100258941
location: 392286..393515
location: region:392286-393515:1
so has part: feature:392286-393515:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:392286-393515:1:exon

LOC100258941
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100258941
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100258941
translation: MGRSSRHKAILPEPPLASSRSLLLQFNHTIKKMEYKASCTATKCPERMAAKAPVEVGTRGTVGSLVMKEIEYFSRLELDRHGSGSSQRSQAHVVDVASGSTGRSRHRFWFLIMTWRRKKRRSSRTFLPSICSVVEVADSHRLNGIPGFNYRILKDDVKNMHF
SIO_010081: LOC100258941
subclass of: SO_0000673
so part of: LOC100258941
location: 392486..392974
location: region:392486-392974:1
so has part: feature:392486-392974:1:exon

XP_010655362.1
type: Protein
SIO_000068: ncbiprotein

position:392486:1
position: 392486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392974:1
position: 392974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392486-392974:1:exon

LOC100264109
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100264109
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(393710..396424)
location: region:393710-396424:-1
so has part: feature:393710-396424:-1:exon
subclass of: SO_0000010

100264109
type: Gene
SIO_000068: ncbigene

position:393710:-1
position: 393710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396424:-1
position: 396424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393710-396424:-1:exon

LOC100264109
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100264109
product: serine/threonine-protein kinase CDL1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_010657061.2
SIO_010081: LOC100264109
subclass of: SO_0000673
so part of: LOC100264109
location: complement(join(393710..394208,394453..394844,395136..395325,395410..395585,395946..396424))
location: region:393710-396424:-1
so has part: feature:395946-396424:-1:exon
so has part: feature:395410-395585:-1:exon
so has part: feature:395136-395325:-1:exon
so has part: feature:394453-394844:-1:exon
so has part: feature:393710-394208:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:395946-396424:-1:exon

position:395946:-1
position: 395946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:395410-395585:-1:exon

position:395410:-1
position: 395410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395585:-1
position: 395585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:395136-395325:-1:exon

position:395136:-1
position: 395136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395325:-1
position: 395325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:394453-394844:-1:exon

position:394453:-1
position: 394453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394844:-1
position: 394844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:393710-394208:-1:exon

position:394208:-1
position: 394208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100264109
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100264109
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase CDL1
translation: MEEMNCILCCRLTGDNTVEKKKSIEENKDDKTVASFVKDIAWKSAGTDKKGTLTKEILKAGNPKISAQVFTFRELATATSNFRAECLLGEGGFGRVYKGHINNQDVAVKQLDRNGVQGNREFLAEVLMLSLVHHPNLVNLMGYCAEGDQRILVYEYMPNGSLENLLFDLPPNQEPLDWITRMKIAEGAAKGLEFLHEGANPPVIYRDFKASNILLDEEFNPKLSDFGLAKLGPTGGQDHVSTRVMGTYGYCAPEYALTGKLTTKSDVYSFGVMFLEMITGRRVIDTTRPTEEQNLISWAAPLFRDKKKFTLMADPLLEGKYPVKSLYQALAVAAMCLQEEASTRPLISDVVAALEFLARPKAV
SIO_010081: LOC100264109
subclass of: SO_0000673
so part of: LOC100264109
location: complement(join(394011..394208,394453..394844,395136..395325,395410..395585,395946..396081))
location: region:394011-396081:-1
so has part: feature:395946-396081:-1:exon
so has part: feature:395410-395585:-1:exon
so has part: feature:395136-395325:-1:exon
so has part: feature:394453-394844:-1:exon
so has part: feature:394011-394208:-1:exon

XP_010655363.1
type: Protein
SIO_000068: ncbiprotein

position:394011:-1
position: 394011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396081:-1
position: 396081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395946-396081:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:395410-395585:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:395136-395325:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:394453-394844:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:394011-394208:-1:exon

LOC100241827
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100241827
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 396773..401512
location: region:396773-401512:1
so has part: feature:396773-401512:1:exon
subclass of: SO_0000010

100241827
type: Gene
SIO_000068: ncbigene

position:396773:1
position: 396773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401512:1
position: 401512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396773-401512:1:exon

LOC100241827
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100241827
product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1, chloroplastic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 192 samples with support for all annotated introns
transcript id: XM_002264424.4
SIO_010081: LOC100241827
subclass of: SO_0000673
so part of: LOC100241827
location: join(396773..397509,398713..398779,398886..398960,399078..399129,400097..400182,400264..400338,400787..400881,400962..401512)
location: region:396773-401512:1
so has part: feature:396773-397509:1:exon
so has part: feature:398713-398779:1:exon
so has part: feature:398886-398960:1:exon
so has part: feature:399078-399129:1:exon
so has part: feature:400097-400182:1:exon
so has part: feature:400264-400338:1:exon
so has part: feature:400787-400881:1:exon
so has part: feature:400962-401512:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:396773-397509:1:exon

position:397509:1
position: 397509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:398713-398779:1:exon

position:398713:1
position: 398713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398779:1
position: 398779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:398886-398960:1:exon

position:398886:1
position: 398886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398960:1
position: 398960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:399078-399129:1:exon

position:399078:1
position: 399078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399129:1
position: 399129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:400097-400182:1:exon

position:400097:1
position: 400097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400182:1
position: 400182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:400264-400338:1:exon

position:400264:1
position: 400264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400338:1
position: 400338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:400787-400881:1:exon

position:400787:1
position: 400787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400881:1
position: 400881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:400962-401512:1:exon

position:400962:1
position: 400962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100241827
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100241827
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1, chloroplastic
translation: MTRCRLLIVTRVKPLQKPNSESSTSDDLSNVPPMAVFRSLNTLIRSPNSKRLLLTVSASATPFPRLSSILSPLSLSFASRFTYSHSRVLSPLSISIPFRGPLFLSSPPWKLSQSATPLLLQGDVVLRNVEALKLLRNRSFPIRLGGFGSVSAGTGLLGRLDKKQLISGDVGVAYGDFVKSFMNLPNLISFSRLASGPLLAWMILNEWYLSAFVGLAISGATDWLDGYMARKMGINSVIGSYLDPLADKVLIGCVALAMVDKDLLHPGLVGLVVLRDVALIGGAVYKRASSLGWEWKSWFDFFNLDGTHPQKVEPLFISKVNTVLQLALVTAALLQPEFGTQETESYITYLSWLVASTTVASTAAYGAQHMRNRSKLIAGSR
SIO_010081: LOC100241827
subclass of: SO_0000673
so part of: LOC100241827
location: join(396908..397509,398713..398779,398886..398960,399078..399129,400097..400182,400264..400338,400787..400881,400962..401055)
location: region:396908-401055:1
so has part: feature:396908-397509:1:exon
so has part: feature:398713-398779:1:exon
so has part: feature:398886-398960:1:exon
so has part: feature:399078-399129:1:exon
so has part: feature:400097-400182:1:exon
so has part: feature:400264-400338:1:exon
so has part: feature:400787-400881:1:exon
so has part: feature:400962-401055:1:exon

XP_002264460.2
type: Protein
SIO_000068: ncbiprotein

position:396908:1
position: 396908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401055:1
position: 401055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396908-397509:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:398713-398779:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:398886-398960:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399078-399129:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:400097-400182:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:400264-400338:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:400787-400881:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:400962-401055:1:exon

LOC100246958
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100246958
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 402255..412078
location: region:402255-412078:1
so has part: feature:402255-412078:1:exon
subclass of: SO_0000010

100246958
type: Gene
SIO_000068: ncbigene

position:402255:1
position: 402255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412078:1
position: 412078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402255-412078:1:exon

LOC100246958
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100246958
product: malonyl-CoA decarboxylase, mitochondrial, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 128 samples with support for all annotated introns
transcript id: XM_010657062.2
SIO_010081: LOC100246958
subclass of: SO_0000673
so part of: LOC100246958
location: join(402255..402504,402983..403110,403494..403584,403663..403789,403895..404078,405929..406073,406192..406282,406879..406937,407018..407095,407539..407622,408514..408701,409343..409471,409816..409888,410746..410831,411072..411156,411716..412078)
location: region:402255-412078:1
so has part: feature:402255-402504:1:exon
so has part: feature:402983-403110:1:exon
so has part: feature:403494-403584:1:exon
so has part: feature:403663-403789:1:exon
so has part: feature:403895-404078:1:exon
so has part: feature:405929-406073:1:exon
so has part: feature:406192-406282:1:exon
so has part: feature:406879-406937:1:exon
so has part: feature:407018-407095:1:exon
so has part: feature:407539-407622:1:exon
so has part: feature:408514-408701:1:exon
so has part: feature:409343-409471:1:exon
so has part: feature:409816-409888:1:exon
so has part: feature:410746-410831:1:exon
so has part: feature:411072-411156:1:exon
so has part: feature:411716-412078:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:402255-402504:1:exon

position:402504:1
position: 402504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:402983-403110:1:exon

position:402983:1
position: 402983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403110:1
position: 403110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:403494-403584:1:exon

position:403494:1
position: 403494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403584:1
position: 403584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:403663-403789:1:exon

position:403663:1
position: 403663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403789:1
position: 403789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:403895-404078:1:exon

position:403895:1
position: 403895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404078:1
position: 404078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:405929-406073:1:exon

position:405929:1
position: 405929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406073:1
position: 406073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:406192-406282:1:exon

position:406192:1
position: 406192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406282:1
position: 406282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:406879-406937:1:exon

position:406879:1
position: 406879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406937:1
position: 406937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:407018-407095:1:exon

position:407018:1
position: 407018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407095:1
position: 407095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:407539-407622:1:exon

position:407539:1
position: 407539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407622:1
position: 407622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:408514-408701:1:exon

position:408514:1
position: 408514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408701:1
position: 408701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:409343-409471:1:exon

position:409343:1
position: 409343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409471:1
position: 409471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:409816-409888:1:exon

position:409816:1
position: 409816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409888:1
position: 409888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:410746-410831:1:exon

position:410746:1
position: 410746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410831:1
position: 410831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:411072-411156:1:exon

position:411072:1
position: 411072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411156:1
position: 411156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:411716-412078:1:exon

position:411716:1
position: 411716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100246958
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 29760
gene: LOC100246958
product: malonyl-CoA decarboxylase, mitochondrial, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XR_786698.2
SIO_010081: LOC100246958
so part of: LOC100246958
location: join(402255..402504,402983..403110,403494..403584,403663..403789,403895..404078,405929..406073,406192..406282,406879..406937,407018..407095,407539..407622,408514..408701,409343..409471,409816..409888,410746..410831,411072..411156,411716..411807,411877..412078)
location: region:402255-412078:1
so has part: feature:402255-402504:1:exon
so has part: feature:402983-403110:1:exon
so has part: feature:403494-403584:1:exon
so has part: feature:403663-403789:1:exon
so has part: feature:403895-404078:1:exon
so has part: feature:405929-406073:1:exon
so has part: feature:406192-406282:1:exon
so has part: feature:406879-406937:1:exon
so has part: feature:407018-407095:1:exon
so has part: feature:407539-407622:1:exon
so has part: feature:408514-408701:1:exon
so has part: feature:409343-409471:1:exon
so has part: feature:409816-409888:1:exon
so has part: feature:410746-410831:1:exon
so has part: feature:411072-411156:1:exon
so has part: feature:411716-411807:1:exon
so has part: feature:411877-412078:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:402255-402504:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:402983-403110:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:403494-403584:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:403663-403789:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:403895-404078:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:405929-406073:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:406192-406282:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:406879-406937:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:407018-407095:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:407539-407622:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:408514-408701:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:409343-409471:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:409816-409888:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:410746-410831:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:411072-411156:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:411716-411807:1:exon

position:411807:1
position: 411807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:411877-412078:1:exon

position:411877:1
position: 411877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100246958
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 29760
gene: LOC100246958
product: malonyl-CoA decarboxylase, mitochondrial, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XR_002031023.1
SIO_010081: LOC100246958
so part of: LOC100246958
location: join(402417..402504,402960..403110,403494..403584,403663..403789,403895..404078,405929..406073,406192..406282,406879..406937,407018..407095,407539..407622,408514..408701,409343..409471,409816..409888,410746..410831,411072..411156,411716..411807,411877..412078)
location: region:402417-412078:1
so has part: feature:402417-402504:1:exon
so has part: feature:402960-403110:1:exon
so has part: feature:403494-403584:1:exon
so has part: feature:403663-403789:1:exon
so has part: feature:403895-404078:1:exon
so has part: feature:405929-406073:1:exon
so has part: feature:406192-406282:1:exon
so has part: feature:406879-406937:1:exon
so has part: feature:407018-407095:1:exon
so has part: feature:407539-407622:1:exon
so has part: feature:408514-408701:1:exon
so has part: feature:409343-409471:1:exon
so has part: feature:409816-409888:1:exon
so has part: feature:410746-410831:1:exon
so has part: feature:411072-411156:1:exon
so has part: feature:411716-411807:1:exon
so has part: feature:411877-412078:1:exon

position:402417:1
position: 402417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402417-402504:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:402960-403110:1:exon

position:402960:1
position: 402960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:403494-403584:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:403663-403789:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:403895-404078:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:405929-406073:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:406192-406282:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:406879-406937:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:407018-407095:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:407539-407622:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:408514-408701:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:409343-409471:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:409816-409888:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:410746-410831:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:411072-411156:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:411716-411807:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:411877-412078:1:exon

LOC100246958
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100246958
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: malonyl-CoA decarboxylase, mitochondrial
translation: MNKKGLAILMRTRMKPTNPSERSLFPAANEANKLVSSSEINQSNGSIARLAREEKNKSYSQKLNSSGNTYREFEFVRETMHSAISMNKTEVLDDVLNNFSEGYSSLSHENRRKLLLVLAKEYDLNRTQIRELIKQYLGLELPSGEKAQSSGTEEEGSLSAFYRTERNLRHALKPTYEVLFERLNTHPGGLKFLSILRADILCILTEDNIASLRALDSYLKEKLITWLSPAALELHHITWDDSASLLEKIVAYEAVHPISSLTDLKRRLGVGRRCFGYLHPAIPGEPLIFIEVALLKNVAQTIQEVLWNDPPIPECESTCALFYSISSTQPGLAGINLGKFLIKRVIKLVKRDMPHISTFATLSPILGFMQWLLSKLASQSKLAETETRGMAHSSAESFGSTFRENILEPEEERALLDSSVEFTAGASGMEVMWNLLTDADFEWINSARLLSVLKPPLMRLCARYLLQEKKRGKALDSVANFHLQNGAMVERLNWMADRSEKGLLQSGGIMVNYVYRLDDIEEYAQSYFSSGHIHTSSDLCCYVEPLKENETTKD
SIO_010081: LOC100246958
subclass of: SO_0000673
so part of: LOC100246958
location: join(402421..402504,402983..403110,403494..403584,403663..403789,403895..404078,405929..406073,406192..406282,406879..406937,407018..407095,407539..407622,408514..408701,409343..409471,409816..409888,410746..410831,411072..411156,411716..411748)
location: region:402421-411748:1
so has part: feature:402421-402504:1:exon
so has part: feature:402983-403110:1:exon
so has part: feature:403494-403584:1:exon
so has part: feature:403663-403789:1:exon
so has part: feature:403895-404078:1:exon
so has part: feature:405929-406073:1:exon
so has part: feature:406192-406282:1:exon
so has part: feature:406879-406937:1:exon
so has part: feature:407018-407095:1:exon
so has part: feature:407539-407622:1:exon
so has part: feature:408514-408701:1:exon
so has part: feature:409343-409471:1:exon
so has part: feature:409816-409888:1:exon
so has part: feature:410746-410831:1:exon
so has part: feature:411072-411156:1:exon
so has part: feature:411716-411748:1:exon

XP_010655364.1
type: Protein
SIO_000068: ncbiprotein

position:402421:1
position: 402421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411748:1
position: 411748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402421-402504:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:402983-403110:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:403494-403584:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:403663-403789:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:403895-404078:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:405929-406073:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:406192-406282:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:406879-406937:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:407018-407095:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:407539-407622:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:408514-408701:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:409343-409471:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:409816-409888:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:410746-410831:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:411072-411156:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:411716-411748:1:exon

LOC100252097
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100252097
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(412209..414566)
location: region:412209-414566:-1
so has part: feature:412209-414566:-1:exon
subclass of: SO_0000010

100252097
type: Gene
SIO_000068: ncbigene

position:412209:-1
position: 412209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414566:-1
position: 414566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412209-414566:-1:exon

LOC100252097
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100252097
product: chaperonin-like RBCX protein 1, chloroplastic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XM_002264334.4
SIO_010081: LOC100252097
subclass of: SO_0000673
so part of: LOC100252097
location: complement(join(412209..412527,412610..412672,412767..412783,413112..413229,413442..413536,413636..413864,414461..414566))
location: region:412209-414566:-1
so has part: feature:414461-414566:-1:exon
so has part: feature:413636-413864:-1:exon
so has part: feature:413442-413536:-1:exon
so has part: feature:413112-413229:-1:exon
so has part: feature:412767-412783:-1:exon
so has part: feature:412610-412672:-1:exon
so has part: feature:412209-412527:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:414461-414566:-1:exon

position:414461:-1
position: 414461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:413636-413864:-1:exon

position:413636:-1
position: 413636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413864:-1
position: 413864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:413442-413536:-1:exon

position:413442:-1
position: 413442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413536:-1
position: 413536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:413112-413229:-1:exon

position:413112:-1
position: 413112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413229:-1
position: 413229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:412767-412783:-1:exon

position:412767:-1
position: 412767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412783:-1
position: 412783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:412610-412672:-1:exon

position:412610:-1
position: 412610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412672:-1
position: 412672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:412209-412527:-1:exon

position:412527:-1
position: 412527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100252097
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100252097
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chaperonin-like RBCX protein 1, chloroplastic
translation: MLSPVSGQGGVELLMYLPMEASAISPSAQLSFFSYRPDRTRAYPSRPWKQRISQPTRIHCQKMYVAGFGEASPEAKAAKNIHNFFTYIAVRIVTAQLQSYNPEAYEELMEFLSRHSLSDGDKFCSDLMRESSRHKGLALRILEVRSAYCKNDFEWDNLKRLAFKMVDESNTGIMRDYVLETSHSES
SIO_010081: LOC100252097
subclass of: SO_0000673
so part of: LOC100252097
location: complement(join(412459..412527,412610..412672,412767..412783,413112..413229,413442..413536,413636..413834))
location: region:412459-413834:-1
so has part: feature:413636-413834:-1:exon
so has part: feature:413442-413536:-1:exon
so has part: feature:413112-413229:-1:exon
so has part: feature:412767-412783:-1:exon
so has part: feature:412610-412672:-1:exon
so has part: feature:412459-412527:-1:exon

XP_002264370.3
type: Protein
SIO_000068: ncbiprotein

position:412459:-1
position: 412459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413834:-1
position: 413834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413636-413834:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:413442-413536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413112-413229:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:412767-412783:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:412610-412672:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:412459-412527:-1:exon

LOC100262323
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100262323
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 413879..427241
location: region:413879-427241:1
so has part: feature:413879-427241:1:exon
subclass of: SO_0000010

100262323
type: Gene
SIO_000068: ncbigene

position:413879:1
position: 413879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427241:1
position: 427241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413879-427241:1:exon

LOC100262323
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100262323
product: lysM domain receptor-like kinase 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_019222612.1
SIO_010081: LOC100262323
subclass of: SO_0000673
so part of: LOC100262323
location: join(413879..415053,417757..417790,417908..417915,418036..418197,418406..418608,419379..419468,420652..420743,421562..421703,421820..421918,422001..422382)
location: region:413879-422382:1
so has part: feature:413879-415053:1:exon
so has part: feature:417757-417790:1:exon
so has part: feature:417908-417915:1:exon
so has part: feature:418036-418197:1:exon
so has part: feature:418406-418608:1:exon
so has part: feature:419379-419468:1:exon
so has part: feature:420652-420743:1:exon
so has part: feature:421562-421703:1:exon
so has part: feature:421820-421918:1:exon
so has part: feature:422001-422382:1:exon

position:422382:1
position: 422382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413879-415053:1:exon

position:415053:1
position: 415053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:417757-417790:1:exon

position:417757:1
position: 417757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417790:1
position: 417790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:417908-417915:1:exon

position:417908:1
position: 417908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417915:1
position: 417915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:418036-418197:1:exon

position:418036:1
position: 418036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418197:1
position: 418197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:418406-418608:1:exon

position:418406:1
position: 418406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418608:1
position: 418608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:419379-419468:1:exon

position:419379:1
position: 419379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419468:1
position: 419468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:420652-420743:1:exon

position:420652:1
position: 420652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420743:1
position: 420743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:421562-421703:1:exon

position:421562:1
position: 421562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421703:1
position: 421703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:421820-421918:1:exon

position:421820:1
position: 421820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421918:1
position: 421918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:422001-422382:1:exon

position:422001:1
position: 422001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100262323
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100262323
product: lysM domain receptor-like kinase 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 113 samples with support for all annotated introns
transcript id: XM_010657064.2
SIO_010081: LOC100262323
subclass of: SO_0000673
so part of: LOC100262323
location: join(413881..415053,417757..417790,417908..417915,418036..418197,418406..418608,419379..419468,420241..420334,420423..420574,420652..420743,421562..421703,421820..421918,422001..422382)
location: region:413881-422382:1
so has part: feature:413881-415053:1:exon
so has part: feature:417757-417790:1:exon
so has part: feature:417908-417915:1:exon
so has part: feature:418036-418197:1:exon
so has part: feature:418406-418608:1:exon
so has part: feature:419379-419468:1:exon
so has part: feature:420241-420334:1:exon
so has part: feature:420423-420574:1:exon
so has part: feature:420652-420743:1:exon
so has part: feature:421562-421703:1:exon
so has part: feature:421820-421918:1:exon
so has part: feature:422001-422382:1:exon

position:413881:1
position: 413881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413881-415053:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:417757-417790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:417908-417915:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:418036-418197:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:418406-418608:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:419379-419468:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:420241-420334:1:exon

position:420241:1
position: 420241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420334:1
position: 420334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:420423-420574:1:exon

position:420423:1
position: 420423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420574:1
position: 420574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:420652-420743:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:421562-421703:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:421820-421918:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:422001-422382:1:exon

LOC100262323
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100262323
product: lysM domain receptor-like kinase 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_019222611.1
SIO_010081: LOC100262323
subclass of: SO_0000673
so part of: LOC100262323
location: join(413917..415053,424352..424385,424510..424517,424638..424796,424942..425144,425327..425416,425707..425800,425895..426046,426123..426214,426384..426525,426624..426722,426804..427241)
location: region:413917-427241:1
so has part: feature:413917-415053:1:exon
so has part: feature:424352-424385:1:exon
so has part: feature:424510-424517:1:exon
so has part: feature:424638-424796:1:exon
so has part: feature:424942-425144:1:exon
so has part: feature:425327-425416:1:exon
so has part: feature:425707-425800:1:exon
so has part: feature:425895-426046:1:exon
so has part: feature:426123-426214:1:exon
so has part: feature:426384-426525:1:exon
so has part: feature:426624-426722:1:exon
so has part: feature:426804-427241:1:exon

position:413917:1
position: 413917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413917-415053:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:424352-424385:1:exon

position:424352:1
position: 424352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424385:1
position: 424385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:424510-424517:1:exon

position:424510:1
position: 424510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424517:1
position: 424517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:424638-424796:1:exon

position:424638:1
position: 424638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424796:1
position: 424796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:424942-425144:1:exon

position:424942:1
position: 424942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425144:1
position: 425144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:425327-425416:1:exon

position:425327:1
position: 425327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425416:1
position: 425416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:425707-425800:1:exon

position:425707:1
position: 425707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425800:1
position: 425800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:425895-426046:1:exon

position:425895:1
position: 425895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426046:1
position: 426046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:426123-426214:1:exon

position:426123:1
position: 426123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426214:1
position: 426214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:426384-426525:1:exon

position:426384:1
position: 426384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426525:1
position: 426525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:426624-426722:1:exon

position:426624:1
position: 426624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426722:1
position: 426722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:426804-427241:1:exon

position:426804:1
position: 426804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100262323
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100262323
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysM domain receptor-like kinase 3 isoform X2
translation: MVISSNSRNAIQILAFGFHFLVLLCSKANAKCSRGCDLALASYYVWDGSNLTYIRKIFGREISEILKYNPQIENQDSIDTGSRINVPFRCDCLNGDFLGHTFEYTTQFGDTYDRIAERAFSNLTTEDWVHRVNEYPPTRIPDDVQINVTVNCSCGNRRVSMKYGLFATYPLRDGENLSTVAAAAGITDDLVRRYNPAADFSAGTGLVFVPAKDQNGSYPPLKLSQNGISVGVIAGISVAGVAGSLLLAFVLYVGIYKRKMGKAPLLPAAFEDQHMQPGQGYGSTLEKTSDSVALVAAVSLELVGITADKSVEFTYEELAKATNNFSAASKIGQGGFALVYYAELQGQKAAIKKMDMQASKEFLAELKVLTHVHHFNLVRLIGYCVTGSLFIVYEYIENGNLSQHLRGSGNDPLPWSTRVQIALDAARGLEYIHEHTVPVYVHRDIKSANILIDKNLRAKVADFGLTKLTVAGSSSLPTRLVGTFGYMPPEYAQFGAVTPKIDVYAFGVVLYELISAKEAIIKTNGSTTTEARGLVALFENVLSWPDLREDFCELIDHRLGNDYPLDLIWKMAQLAKACTQEDPQLRPSMQSVVVALMTLSSSTEDWDVRSVYENKALVNLMSGR
SIO_010081: LOC100262323
subclass of: SO_0000673
so part of: LOC100262323
location: join(414417..415053,424352..424385,424510..424517,424638..424796,424942..425144,425327..425416,425707..425800,425895..426046,426123..426214,426384..426525,426624..426722,426804..426968)
location: region:414417-426968:1
so has part: feature:414417-415053:1:exon
so has part: feature:424352-424385:1:exon
so has part: feature:424510-424517:1:exon
so has part: feature:424638-424796:1:exon
so has part: feature:424942-425144:1:exon
so has part: feature:425327-425416:1:exon
so has part: feature:425707-425800:1:exon
so has part: feature:425895-426046:1:exon
so has part: feature:426123-426214:1:exon
so has part: feature:426384-426525:1:exon
so has part: feature:426624-426722:1:exon
so has part: feature:426804-426968:1:exon

XP_019078156.1
type: Protein
SIO_000068: ncbiprotein

position:414417:1
position: 414417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426968:1
position: 426968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414417-415053:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:424352-424385:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:424510-424517:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:424638-424796:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:424942-425144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:425327-425416:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:425707-425800:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:425895-426046:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:426123-426214:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:426384-426525:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:426624-426722:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:426804-426968:1:exon

LOC100262323
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100262323
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysM domain receptor-like kinase 3 isoform X1
translation: MVISSNSRNAIQILAFGFHFLVLLCSKANAKCSRGCDLALASYYVWDGSNLTYIRKIFGREISEILKYNPQIENQDSIDTGSRINVPFRCDCLNGDFLGHTFEYTTQFGDTYDRIAERAFSNLTTEDWVHRVNEYPPTRIPDDVQINVTVNCSCGNRRVSMKYGLFATYPLRDGENLSTVAAAAGITDDLVRRYNPAADFSAGTGLVFVPAKDQNETYPPLKLSNSGISSGVIAGISVAGIVGSLLFAFFLFARICKRKKVKKVLFFPAASEQQYMQHRQAHGSASEETSDSAALVGAASLGLVGITVDKSVEFSYEELATATDNFSLANKIGQGGFGSVYYAELRGEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEFIDNGNLSHHLRGSGKDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKKFRAKVADFGLTKLTEVGSASIPTRLVGTFGYMPPEYAQYGDVSPKIDVFAFGVVLYELISAKEAIVKTNEPIMPESKGLVALFEDVLSQPDPREDFVKLIDQRLGDDYPLDSIWKMAHLAKACTQENPQLRPSMRSIVVALMTLSSSTEDWDVGSFYENEALMNLMSGR
SIO_010081: LOC100262323
subclass of: SO_0000673
so part of: LOC100262323
location: join(414417..415053,417757..417790,417908..417915,418036..418197,418406..418608,419379..419468,420241..420334,420423..420574,420652..420743,421562..421703,421820..421918,422001..422165)
location: region:414417-422165:1
so has part: feature:414417-415053:1:exon
so has part: feature:417757-417790:1:exon
so has part: feature:417908-417915:1:exon
so has part: feature:418036-418197:1:exon
so has part: feature:418406-418608:1:exon
so has part: feature:419379-419468:1:exon
so has part: feature:420241-420334:1:exon
so has part: feature:420423-420574:1:exon
so has part: feature:420652-420743:1:exon
so has part: feature:421562-421703:1:exon
so has part: feature:421820-421918:1:exon
so has part: feature:422001-422165:1:exon

XP_010655366.1
type: Protein
SIO_000068: ncbiprotein

position:422165:1
position: 422165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414417-415053:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:417757-417790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:417908-417915:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:418036-418197:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:418406-418608:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:419379-419468:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:420241-420334:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:420423-420574:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:420652-420743:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:421562-421703:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:421820-421918:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:422001-422165:1:exon

LOC100262323
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100262323
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chitin elicitor receptor kinase 1 isoform X5
translation: MVISSNSRNAIQILAFGFHFLVLLCSKANAKCSRGCDLALASYYVWDGSNLTYIRKIFGREISEILKYNPQIENQDSIDTGSRINVPFRCDCLNGDFLGHTFEYTTQFGDTYDRIAERAFSNLTTEDWVHRVNEYPPTRIPDDVQINVTVNCSCGNRRVSMKYGLFATYPLRDGENLSTVAAAAGITDDLVRRYNPAADFSAGTGLVFVPAKDQNETYPPLKLSNSGISSGVIAGISVAGIVGSLLFAFFLFARICKRKKVKKVLFFPAASEQQYMQHRQAHGSASEETSDSAALVGAASLGLVGITVDKSVEFSYEELATATDNFSLANKIGQGGFGSVYYAELRGEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVADFGLTKLTEVGSASIPTRLVGTFGYMPPEYAQYGDVSPKIDVFAFGVVLYELISAKEAIVKTNEPIMPESKGLVALFEDVLSQPDPREDFVKLIDQRLGDDYPLDSIWKMAHLAKACTQENPQLRPSMRSIVVALMTLSSSTEDWDVGSFYENEALMNLMSGR
SIO_010081: LOC100262323
subclass of: SO_0000673
so part of: LOC100262323
location: join(414417..415053,417757..417790,417908..417915,418036..418197,418406..418608,419379..419468,420652..420743,421562..421703,421820..421918,422001..422165)
location: region:414417-422165:1
so has part: feature:414417-415053:1:exon
so has part: feature:417757-417790:1:exon
so has part: feature:417908-417915:1:exon
so has part: feature:418036-418197:1:exon
so has part: feature:418406-418608:1:exon
so has part: feature:419379-419468:1:exon
so has part: feature:420652-420743:1:exon
so has part: feature:421562-421703:1:exon
so has part: feature:421820-421918:1:exon
so has part: feature:422001-422165:1:exon

XP_019078157.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414417-415053:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:417757-417790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:417908-417915:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:418036-418197:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:418406-418608:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:419379-419468:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:420652-420743:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:421562-421703:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:421820-421918:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:422001-422165:1:exon

LOC100262323
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100262323
product: lysM domain receptor-like kinase 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 79 samples with support for all annotated introns
transcript id: XM_010657065.2
SIO_010081: LOC100262323
subclass of: SO_0000673
so part of: LOC100262323
location: join(416045..417036,417757..417790,417908..417915,418036..418197,418406..418608,419379..419468,420241..420334,420423..420574,420652..420743,421562..421703,421820..421918,422001..422382)
location: region:416045-422382:1
so has part: feature:416045-417036:1:exon
so has part: feature:417757-417790:1:exon
so has part: feature:417908-417915:1:exon
so has part: feature:418036-418197:1:exon
so has part: feature:418406-418608:1:exon
so has part: feature:419379-419468:1:exon
so has part: feature:420241-420334:1:exon
so has part: feature:420423-420574:1:exon
so has part: feature:420652-420743:1:exon
so has part: feature:421562-421703:1:exon
so has part: feature:421820-421918:1:exon
so has part: feature:422001-422382:1:exon

position:416045:1
position: 416045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416045-417036:1:exon

position:417036:1
position: 417036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:417757-417790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:417908-417915:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:418036-418197:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:418406-418608:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:419379-419468:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:420241-420334:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:420423-420574:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:420652-420743:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:421562-421703:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:421820-421918:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:422001-422382:1:exon

LOC100262323
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100262323
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysM domain receptor-like kinase 3 isoform X3
translation: MAVSRKKEFEFTLVFWGLMFICIGVESKCSRTCDLALASYNLWKGVDLNFIATTFSRDVSEIQSFNPQITNIDLIIAGERVNVPFSCGCIDREFLGTTFVYSAKQNDTYSIIAEKYFANLTTVEWLQRFNTYAPTNIPIDAPINVTVNCSCGNSSVSKDYGLFVTYPLEPGENLSTIANQSGLPPQLLQDYNPDSDFSRGSGLVFIPGKDQNETYPPLKLSNSGISSGVIAGISVAGIVGSLLFAFFLFARICKRKKVKKVLFFPAASEQQYMQHRQAHGSASEETSDSAALVGAASLGLVGITVDKSVEFSYEELATATDNFSLANKIGQGGFGSVYYAELRGEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEFIDNGNLSHHLRGSGKDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKKFRAKVADFGLTKLTEVGSASIPTRLVGTFGYMPPEYAQYGDVSPKIDVFAFGVVLYELISAKEAIVKTNEPIMPESKGLVALFEDVLSQPDPREDFVKLIDQRLGDDYPLDSIWKMAHLAKACTQENPQLRPSMRSIVVALMTLSSSTEDWDVGSFYENEALMNLMSGR
SIO_010081: LOC100262323
subclass of: SO_0000673
so part of: LOC100262323
location: join(416409..417036,417757..417790,417908..417915,418036..418197,418406..418608,419379..419468,420241..420334,420423..420574,420652..420743,421562..421703,421820..421918,422001..422165)
location: region:416409-422165:1
so has part: feature:416409-417036:1:exon
so has part: feature:417757-417790:1:exon
so has part: feature:417908-417915:1:exon
so has part: feature:418036-418197:1:exon
so has part: feature:418406-418608:1:exon
so has part: feature:419379-419468:1:exon
so has part: feature:420241-420334:1:exon
so has part: feature:420423-420574:1:exon
so has part: feature:420652-420743:1:exon
so has part: feature:421562-421703:1:exon
so has part: feature:421820-421918:1:exon
so has part: feature:422001-422165:1:exon

XP_010655367.1
type: Protein
SIO_000068: ncbiprotein

position:416409:1
position: 416409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416409-417036:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:417757-417790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:417908-417915:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:418036-418197:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:418406-418608:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:419379-419468:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:420241-420334:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:420423-420574:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:420652-420743:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:421562-421703:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:421820-421918:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:422001-422165:1:exon

LOC100262323
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100262323
product: lysM domain receptor-like kinase 3, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_019222614.1
SIO_010081: LOC100262323
subclass of: SO_0000673
so part of: LOC100262323
location: join(422883..422987,423097..423164,423295..423659,424352..424385,424510..424517,424638..424796,424942..425144,425327..425416,425707..425800,425895..426046,426123..426214,426384..426525,426624..426722,426804..427241)
location: region:422883-427241:1
so has part: feature:422883-422987:1:exon
so has part: feature:423097-423164:1:exon
so has part: feature:423295-423659:1:exon
so has part: feature:424352-424385:1:exon
so has part: feature:424510-424517:1:exon
so has part: feature:424638-424796:1:exon
so has part: feature:424942-425144:1:exon
so has part: feature:425327-425416:1:exon
so has part: feature:425707-425800:1:exon
so has part: feature:425895-426046:1:exon
so has part: feature:426123-426214:1:exon
so has part: feature:426384-426525:1:exon
so has part: feature:426624-426722:1:exon
so has part: feature:426804-427241:1:exon

position:422883:1
position: 422883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422883-422987:1:exon

position:422987:1
position: 422987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:423097-423164:1:exon

position:423097:1
position: 423097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423164:1
position: 423164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:423295-423659:1:exon

position:423295:1
position: 423295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423659:1
position: 423659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:424352-424385:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:424510-424517:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:424638-424796:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:424942-425144:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:425327-425416:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:425707-425800:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:425895-426046:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:426123-426214:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:426384-426525:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:426624-426722:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:426804-427241:1:exon

LOC100262323
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100262323
product: lysM domain receptor-like kinase 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 181 samples with support for all annotated introns
transcript id: XM_010657063.2
SIO_010081: LOC100262323
subclass of: SO_0000673
so part of: LOC100262323
location: join(422902..423659,424352..424385,424510..424517,424638..424796,424942..425144,425327..425416,425707..425800,425895..426046,426123..426214,426384..426525,426624..426722,426804..427241)
location: region:422902-427241:1
so has part: feature:422902-423659:1:exon
so has part: feature:424352-424385:1:exon
so has part: feature:424510-424517:1:exon
so has part: feature:424638-424796:1:exon
so has part: feature:424942-425144:1:exon
so has part: feature:425327-425416:1:exon
so has part: feature:425707-425800:1:exon
so has part: feature:425895-426046:1:exon
so has part: feature:426123-426214:1:exon
so has part: feature:426384-426525:1:exon
so has part: feature:426624-426722:1:exon
so has part: feature:426804-427241:1:exon

position:422902:1
position: 422902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422902-423659:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:424352-424385:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:424510-424517:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:424638-424796:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:424942-425144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:425327-425416:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:425707-425800:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:425895-426046:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:426123-426214:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:426384-426525:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:426624-426722:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:426804-427241:1:exon

LOC100262323
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100262323
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysM domain receptor-like kinase 3 isoform X4
translation: MLVFRISRFELMLVFSVLIFLSIGVESKCSRGCDLALASYNIWNGTTLSFIATAFSTSISEIQSFNPQINDIDLIIVDTRLNIPFSCSCIDGEFLGHTFFYSVDSNDTYNIIARTFYANLTTVEWLERFNRYEATEIPVNAIINVTVNCSCGNSRVSKKYGLFVTYPLQPGESLSSIANESGLPSKLLQDYNPGVDFSLGSGLVFIPGKDQNGSYPPLKLSQNGISVGVIAGISVAGVAGSLLLAFVLYVGIYKRKMGKAPLLPAAFEDQHMQPGQGYGSTLEKTSDSVALVAAVSLELVGITADKSVEFTYEELAKATNNFSAASKIGQGGFALVYYAELQGQKAAIKKMDMQASKEFLAELKVLTHVHHFNLVRLIGYCVTGSLFIVYEYIENGNLSQHLRGSGNDPLPWSTRVQIALDAARGLEYIHEHTVPVYVHRDIKSANILIDKNLRAKVADFGLTKLTVAGSSSLPTRLVGTFGYMPPEYAQFGAVTPKIDVYAFGVVLYELISAKEAIIKTNGSTTTEARGLVALFENVLSWPDLREDFCELIDHRLGNDYPLDLIWKMAQLAKACTQEDPQLRPSMQSVVVALMTLSSSTEDWDVRSVYENKALVNLMSGR
SIO_010081: LOC100262323
subclass of: SO_0000673
so part of: LOC100262323
location: join(423032..423659,424352..424385,424510..424517,424638..424796,424942..425144,425327..425416,425707..425800,425895..426046,426123..426214,426384..426525,426624..426722,426804..426968)
location: region:423032-426968:1
so has part: feature:423032-423659:1:exon
so has part: feature:424352-424385:1:exon
so has part: feature:424510-424517:1:exon
so has part: feature:424638-424796:1:exon
so has part: feature:424942-425144:1:exon
so has part: feature:425327-425416:1:exon
so has part: feature:425707-425800:1:exon
so has part: feature:425895-426046:1:exon
so has part: feature:426123-426214:1:exon
so has part: feature:426384-426525:1:exon
so has part: feature:426624-426722:1:exon
so has part: feature:426804-426968:1:exon

XP_010655365.1
type: Protein
SIO_000068: ncbiprotein

position:423032:1
position: 423032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423032-423659:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:424352-424385:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:424510-424517:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:424638-424796:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:424942-425144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:425327-425416:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:425707-425800:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:425895-426046:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:426123-426214:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:426384-426525:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:426624-426722:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:426804-426968:1:exon

LOC100262323
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100262323
product: lysM domain receptor-like kinase 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 104 samples with support for all annotated introns
transcript id: XM_019222613.1
SIO_010081: LOC100262323
subclass of: SO_0000673
so part of: LOC100262323
location: join(423061..423164,423295..423659,424352..424385,424510..424517,424638..424796,424942..425144,425327..425416,425707..425800,425895..426046,426123..426214,426384..426525,426624..426722,426804..427241)
location: region:423061-427241:1
so has part: feature:423061-423164:1:exon
so has part: feature:423295-423659:1:exon
so has part: feature:424352-424385:1:exon
so has part: feature:424510-424517:1:exon
so has part: feature:424638-424796:1:exon
so has part: feature:424942-425144:1:exon
so has part: feature:425327-425416:1:exon
so has part: feature:425707-425800:1:exon
so has part: feature:425895-426046:1:exon
so has part: feature:426123-426214:1:exon
so has part: feature:426384-426525:1:exon
so has part: feature:426624-426722:1:exon
so has part: feature:426804-427241:1:exon

position:423061:1
position: 423061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423061-423164:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:423295-423659:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:424352-424385:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:424510-424517:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:424638-424796:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:424942-425144:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:425327-425416:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:425707-425800:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:425895-426046:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:426123-426214:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:426384-426525:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:426624-426722:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:426804-427241:1:exon

LOC100262323
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100262323
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysM domain receptor-like kinase 3 isoform X6
translation: MECCIDGEFLGHTFFYSVDSNDTYNIIARTFYANLTTVEWLERFNRYEATEIPVNAIINVTVNCSCGNSRVSKKYGLFVTYPLQPGESLSSIANESGLPSKLLQDYNPGVDFSLGSGLVFIPGKDQNGSYPPLKLSQNGISVGVIAGISVAGVAGSLLLAFVLYVGIYKRKMGKAPLLPAAFEDQHMQPGQGYGSTLEKTSDSVALVAAVSLELVGITADKSVEFTYEELAKATNNFSAASKIGQGGFALVYYAELQGQKAAIKKMDMQASKEFLAELKVLTHVHHFNLVRLIGYCVTGSLFIVYEYIENGNLSQHLRGSGNDPLPWSTRVQIALDAARGLEYIHEHTVPVYVHRDIKSANILIDKNLRAKVADFGLTKLTVAGSSSLPTRLVGTFGYMPPEYAQFGAVTPKIDVYAFGVVLYELISAKEAIIKTNGSTTTEARGLVALFENVLSWPDLREDFCELIDHRLGNDYPLDLIWKMAQLAKACTQEDPQLRPSMQSVVVALMTLSSSTEDWDVRSVYENKALVNLMSGR
SIO_010081: LOC100262323
subclass of: SO_0000673
so part of: LOC100262323
location: join(423157..423164,423295..423659,424352..424385,424510..424517,424638..424796,424942..425144,425327..425416,425707..425800,425895..426046,426123..426214,426384..426525,426624..426722,426804..426968)
location: region:423157-426968:1
so has part: feature:423157-423164:1:exon
so has part: feature:423295-423659:1:exon
so has part: feature:424352-424385:1:exon
so has part: feature:424510-424517:1:exon
so has part: feature:424638-424796:1:exon
so has part: feature:424942-425144:1:exon
so has part: feature:425327-425416:1:exon
so has part: feature:425707-425800:1:exon
so has part: feature:425895-426046:1:exon
so has part: feature:426123-426214:1:exon
so has part: feature:426384-426525:1:exon
so has part: feature:426624-426722:1:exon
so has part: feature:426804-426968:1:exon

XP_019078158.1
type: Protein
SIO_000068: ncbiprotein

position:423157:1
position: 423157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423157-423164:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:423295-423659:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:424352-424385:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:424510-424517:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:424638-424796:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:424942-425144:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:425327-425416:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:425707-425800:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:425895-426046:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:426123-426214:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:426384-426525:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:426624-426722:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:426804-426968:1:exon

LOC100262323
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100262323
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysM domain receptor-like kinase 3 isoform X6
translation: MECCIDGEFLGHTFFYSVDSNDTYNIIARTFYANLTTVEWLERFNRYEATEIPVNAIINVTVNCSCGNSRVSKKYGLFVTYPLQPGESLSSIANESGLPSKLLQDYNPGVDFSLGSGLVFIPGKDQNGSYPPLKLSQNGISVGVIAGISVAGVAGSLLLAFVLYVGIYKRKMGKAPLLPAAFEDQHMQPGQGYGSTLEKTSDSVALVAAVSLELVGITADKSVEFTYEELAKATNNFSAASKIGQGGFALVYYAELQGQKAAIKKMDMQASKEFLAELKVLTHVHHFNLVRLIGYCVTGSLFIVYEYIENGNLSQHLRGSGNDPLPWSTRVQIALDAARGLEYIHEHTVPVYVHRDIKSANILIDKNLRAKVADFGLTKLTVAGSSSLPTRLVGTFGYMPPEYAQFGAVTPKIDVYAFGVVLYELISAKEAIIKTNGSTTTEARGLVALFENVLSWPDLREDFCELIDHRLGNDYPLDLIWKMAQLAKACTQEDPQLRPSMQSVVVALMTLSSSTEDWDVRSVYENKALVNLMSGR
SIO_010081: LOC100262323
subclass of: SO_0000673
so part of: LOC100262323
location: join(423157..423164,423295..423659,424352..424385,424510..424517,424638..424796,424942..425144,425327..425416,425707..425800,425895..426046,426123..426214,426384..426525,426624..426722,426804..426968)
location: region:423157-426968:1
so has part: feature:423157-423164:1:exon
so has part: feature:423295-423659:1:exon
so has part: feature:424352-424385:1:exon
so has part: feature:424510-424517:1:exon
so has part: feature:424638-424796:1:exon
so has part: feature:424942-425144:1:exon
so has part: feature:425327-425416:1:exon
so has part: feature:425707-425800:1:exon
so has part: feature:425895-426046:1:exon
so has part: feature:426123-426214:1:exon
so has part: feature:426384-426525:1:exon
so has part: feature:426624-426722:1:exon
so has part: feature:426804-426968:1:exon

XP_019078159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:423157-423164:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:423295-423659:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:424352-424385:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:424510-424517:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:424638-424796:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:424942-425144:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:425327-425416:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:425707-425800:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:425895-426046:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:426123-426214:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:426384-426525:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:426624-426722:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:426804-426968:1:exon

LOC100267484
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100267484
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(427108..430050)
location: region:427108-430050:-1
so has part: feature:427108-430050:-1:exon
subclass of: SO_0000010

100267484
type: Gene
SIO_000068: ncbigene

position:427108:-1
position: 427108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430050:-1
position: 430050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427108-430050:-1:exon

LOC100267484
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100267484
product: pentatricopeptide repeat-containing protein At3g12770
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_002264212.3
SIO_010081: LOC100267484
subclass of: SO_0000673
so part of: LOC100267484
location: complement(join(427108..427252,427397..430050))
location: region:427108-430050:-1
so has part: feature:427397-430050:-1:exon
so has part: feature:427108-427252:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:427397-430050:-1:exon

position:427397:-1
position: 427397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:427108-427252:-1:exon

position:427252:-1
position: 427252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100267484
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100267484
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein At3g12770
translation: MIGKTRRWYHCSISHKDTFHWNSLIAKNATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDERVRKAAKYVTETGLNVEDGDIAGLILRCKYHSERLAIAFGLIMIDRHSTCSCSLRTATPIRITKNLRVCRDCHAYTKLVSKVIDRELIVRDAHRFHHFRDGFCSCGDYW
SIO_010081: LOC100267484
subclass of: SO_0000673
so part of: LOC100267484
location: complement(427529..429832)
location: region:427529-429832:-1
so has part: feature:427529-429832:-1:exon

XP_002264248.1
type: Protein
SIO_000068: ncbiprotein

position:427529:-1
position: 427529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429832:-1
position: 429832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427529-429832:-1:exon

LOC100257332
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100257332
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 433302..449927
location: region:433302-449927:1
so has part: feature:433302-449927:1:exon
subclass of: SO_0000010

100257332
type: Gene
SIO_000068: ncbigene

position:433302:1
position: 433302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449927:1
position: 449927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433302-449927:1:exon

LOC100257332
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100257332
product: calcium permeable stress-gated cation channel 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 160 samples with support for all annotated introns
transcript id: XM_010657066.2
SIO_010081: LOC100257332
subclass of: SO_0000673
so part of: LOC100257332
location: join(433302..433685,435815..436156,436474..436626,437881..438016,439203..439304,440650..440769,440885..440965,446236..446576,446722..446967,447944..448268,448901..449134,449406..449927)
location: region:433302-449927:1
so has part: feature:433302-433685:1:exon
so has part: feature:435815-436156:1:exon
so has part: feature:436474-436626:1:exon
so has part: feature:437881-438016:1:exon
so has part: feature:439203-439304:1:exon
so has part: feature:440650-440769:1:exon
so has part: feature:440885-440965:1:exon
so has part: feature:446236-446576:1:exon
so has part: feature:446722-446967:1:exon
so has part: feature:447944-448268:1:exon
so has part: feature:448901-449134:1:exon
so has part: feature:449406-449927:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:433302-433685:1:exon

position:433685:1
position: 433685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:435815-436156:1:exon

position:435815:1
position: 435815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436156:1
position: 436156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:436474-436626:1:exon

position:436474:1
position: 436474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436626:1
position: 436626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:437881-438016:1:exon

position:437881:1
position: 437881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438016:1
position: 438016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:439203-439304:1:exon

position:439203:1
position: 439203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439304:1
position: 439304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:440650-440769:1:exon

position:440650:1
position: 440650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440769:1
position: 440769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:440885-440965:1:exon

position:440885:1
position: 440885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440965:1
position: 440965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:446236-446576:1:exon

position:446236:1
position: 446236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446576:1
position: 446576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:446722-446967:1:exon

position:446722:1
position: 446722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446967:1
position: 446967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:447944-448268:1:exon

position:447944:1
position: 447944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448268:1
position: 448268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:448901-449134:1:exon

position:448901:1
position: 448901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449134:1
position: 449134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:449406-449927:1:exon

position:449406:1
position: 449406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100257332
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100257332
product: calcium permeable stress-gated cation channel 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 138 samples with support for all annotated introns
transcript id: XM_010657067.2
SIO_010081: LOC100257332
subclass of: SO_0000673
so part of: LOC100257332
location: join(433302..433544,433619..433689,435815..436156,436474..436626,437881..438016,439203..439304,440650..440769,440885..440965,446236..446576,446722..446967,447944..448268,448901..449134,449406..449927)
location: region:433302-449927:1
so has part: feature:433302-433544:1:exon
so has part: feature:433619-433689:1:exon
so has part: feature:435815-436156:1:exon
so has part: feature:436474-436626:1:exon
so has part: feature:437881-438016:1:exon
so has part: feature:439203-439304:1:exon
so has part: feature:440650-440769:1:exon
so has part: feature:440885-440965:1:exon
so has part: feature:446236-446576:1:exon
so has part: feature:446722-446967:1:exon
so has part: feature:447944-448268:1:exon
so has part: feature:448901-449134:1:exon
so has part: feature:449406-449927:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:433302-433544:1:exon

position:433544:1
position: 433544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:433619-433689:1:exon

position:433619:1
position: 433619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433689:1
position: 433689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:435815-436156:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:436474-436626:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:437881-438016:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:439203-439304:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:440650-440769:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:440885-440965:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:446236-446576:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:446722-446967:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:447944-448268:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:448901-449134:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:449406-449927:1:exon

LOC100257332
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100257332
product: calcium permeable stress-gated cation channel 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 131 samples with support for all annotated introns
transcript id: XM_010657068.2
SIO_010081: LOC100257332
subclass of: SO_0000673
so part of: LOC100257332
location: join(433302..433544,433619..433685,435815..436156,436474..436626,437881..438016,439203..439304,440650..440769,440885..440965,446236..446576,446722..446967,447944..448268,448901..449134,449406..449927)
location: region:433302-449927:1
so has part: feature:433302-433544:1:exon
so has part: feature:433619-433685:1:exon
so has part: feature:435815-436156:1:exon
so has part: feature:436474-436626:1:exon
so has part: feature:437881-438016:1:exon
so has part: feature:439203-439304:1:exon
so has part: feature:440650-440769:1:exon
so has part: feature:440885-440965:1:exon
so has part: feature:446236-446576:1:exon
so has part: feature:446722-446967:1:exon
so has part: feature:447944-448268:1:exon
so has part: feature:448901-449134:1:exon
so has part: feature:449406-449927:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:433302-433544:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:433619-433685:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:435815-436156:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:436474-436626:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:437881-438016:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:439203-439304:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:440650-440769:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:440885-440965:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:446236-446576:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:446722-446967:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:447944-448268:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:448901-449134:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:449406-449927:1:exon

LOC100257332
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100257332
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium permeable stress-gated cation channel 1
translation: MATLQDIALAAAINILSACIFFLAFAVLRIQPFNDRVYFPKWYLKGLRSSPTRSGAFVQRFVNLDFRSYLRFLNWMPDALKMPEPELIEHAGLDSAVYLRIYLIGLKLFVPITFLAWAILVPVNWTNASNTLAQSKATYSDIDKLSISNTPLGSERFWSHIVMAYAFTFWTCYLLQKEYEIIASMRLQFLASEKRRPDQFTVLVRNVPPDADESVSELVEHFFLVNHSDNYLTHQVVYDANKLAKLVKKKEKMQNWLDYYQIKYSRNESSRPFLKTGFLGLWGNRVDAMDFYTSEIEKLCKEISVERERVANDPKSIMPAAFVSFKTRWGAAVCAQTQQSRNPTLWLTEWAPEPRDVYWHNLAIPFVSLTVRRLIIAVAFFFLTFFYMIPIAFVQSLASIEGIEKAVPFLRPIIEKKFIKSLIQGFLPGIVLKIFLIVLPTILMLMSKFEGFISISSLERRSASRYYLFNFVNVFLGSIITGSALEQLNTFMKQSPNQIPRTIGVAIPMKATFFISYIMVDGWAGIAAEILMLKPLIIFHLKNFFLVKTEKDREEAMDPGSIGFNTGEPRIQLYFLLGLVYAVVTPVLLPFIIVFFCLAYVVFRHQIINVYNQEYESGAAFWPDVHGRIIGALIISQLLLMGLLSTKQAAQSTPFLIALPILTISFHYYCKGRFEPAFIRYPLQEAKMKDTLERAREPHLNLKGYLQTAYIHPVFKSAEDDEEEEIHGKWEHDAELVPTKRQSRRNTPLPSKFSGSSSPSLPEVVEERGQP
SIO_010081: LOC100257332
subclass of: SO_0000673
so part of: LOC100257332
location: join(435843..436156,436474..436626,437881..438016,439203..439304,440650..440769,440885..440965,446236..446576,446722..446967,447944..448268,448901..449134,449406..449669)
location: region:435843-449669:1
so has part: feature:435843-436156:1:exon
so has part: feature:436474-436626:1:exon
so has part: feature:437881-438016:1:exon
so has part: feature:439203-439304:1:exon
so has part: feature:440650-440769:1:exon
so has part: feature:440885-440965:1:exon
so has part: feature:446236-446576:1:exon
so has part: feature:446722-446967:1:exon
so has part: feature:447944-448268:1:exon
so has part: feature:448901-449134:1:exon
so has part: feature:449406-449669:1:exon

XP_010655368.1
type: Protein
SIO_000068: ncbiprotein

position:435843:1
position: 435843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449669:1
position: 449669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435843-436156:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:436474-436626:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:437881-438016:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:439203-439304:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:440650-440769:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:440885-440965:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:446236-446576:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:446722-446967:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447944-448268:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:448901-449134:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:449406-449669:1:exon

LOC100257332
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100257332
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium permeable stress-gated cation channel 1
translation: MATLQDIALAAAINILSACIFFLAFAVLRIQPFNDRVYFPKWYLKGLRSSPTRSGAFVQRFVNLDFRSYLRFLNWMPDALKMPEPELIEHAGLDSAVYLRIYLIGLKLFVPITFLAWAILVPVNWTNASNTLAQSKATYSDIDKLSISNTPLGSERFWSHIVMAYAFTFWTCYLLQKEYEIIASMRLQFLASEKRRPDQFTVLVRNVPPDADESVSELVEHFFLVNHSDNYLTHQVVYDANKLAKLVKKKEKMQNWLDYYQIKYSRNESSRPFLKTGFLGLWGNRVDAMDFYTSEIEKLCKEISVERERVANDPKSIMPAAFVSFKTRWGAAVCAQTQQSRNPTLWLTEWAPEPRDVYWHNLAIPFVSLTVRRLIIAVAFFFLTFFYMIPIAFVQSLASIEGIEKAVPFLRPIIEKKFIKSLIQGFLPGIVLKIFLIVLPTILMLMSKFEGFISISSLERRSASRYYLFNFVNVFLGSIITGSALEQLNTFMKQSPNQIPRTIGVAIPMKATFFISYIMVDGWAGIAAEILMLKPLIIFHLKNFFLVKTEKDREEAMDPGSIGFNTGEPRIQLYFLLGLVYAVVTPVLLPFIIVFFCLAYVVFRHQIINVYNQEYESGAAFWPDVHGRIIGALIISQLLLMGLLSTKQAAQSTPFLIALPILTISFHYYCKGRFEPAFIRYPLQEAKMKDTLERAREPHLNLKGYLQTAYIHPVFKSAEDDEEEEIHGKWEHDAELVPTKRQSRRNTPLPSKFSGSSSPSLPEVVEERGQP
SIO_010081: LOC100257332
subclass of: SO_0000673
so part of: LOC100257332
location: join(435843..436156,436474..436626,437881..438016,439203..439304,440650..440769,440885..440965,446236..446576,446722..446967,447944..448268,448901..449134,449406..449669)
location: region:435843-449669:1
so has part: feature:435843-436156:1:exon
so has part: feature:436474-436626:1:exon
so has part: feature:437881-438016:1:exon
so has part: feature:439203-439304:1:exon
so has part: feature:440650-440769:1:exon
so has part: feature:440885-440965:1:exon
so has part: feature:446236-446576:1:exon
so has part: feature:446722-446967:1:exon
so has part: feature:447944-448268:1:exon
so has part: feature:448901-449134:1:exon
so has part: feature:449406-449669:1:exon

XP_010655369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:435843-436156:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:436474-436626:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:437881-438016:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:439203-439304:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:440650-440769:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:440885-440965:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:446236-446576:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:446722-446967:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447944-448268:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:448901-449134:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:449406-449669:1:exon

LOC100257332
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100257332
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium permeable stress-gated cation channel 1
translation: MATLQDIALAAAINILSACIFFLAFAVLRIQPFNDRVYFPKWYLKGLRSSPTRSGAFVQRFVNLDFRSYLRFLNWMPDALKMPEPELIEHAGLDSAVYLRIYLIGLKLFVPITFLAWAILVPVNWTNASNTLAQSKATYSDIDKLSISNTPLGSERFWSHIVMAYAFTFWTCYLLQKEYEIIASMRLQFLASEKRRPDQFTVLVRNVPPDADESVSELVEHFFLVNHSDNYLTHQVVYDANKLAKLVKKKEKMQNWLDYYQIKYSRNESSRPFLKTGFLGLWGNRVDAMDFYTSEIEKLCKEISVERERVANDPKSIMPAAFVSFKTRWGAAVCAQTQQSRNPTLWLTEWAPEPRDVYWHNLAIPFVSLTVRRLIIAVAFFFLTFFYMIPIAFVQSLASIEGIEKAVPFLRPIIEKKFIKSLIQGFLPGIVLKIFLIVLPTILMLMSKFEGFISISSLERRSASRYYLFNFVNVFLGSIITGSALEQLNTFMKQSPNQIPRTIGVAIPMKATFFISYIMVDGWAGIAAEILMLKPLIIFHLKNFFLVKTEKDREEAMDPGSIGFNTGEPRIQLYFLLGLVYAVVTPVLLPFIIVFFCLAYVVFRHQIINVYNQEYESGAAFWPDVHGRIIGALIISQLLLMGLLSTKQAAQSTPFLIALPILTISFHYYCKGRFEPAFIRYPLQEAKMKDTLERAREPHLNLKGYLQTAYIHPVFKSAEDDEEEEIHGKWEHDAELVPTKRQSRRNTPLPSKFSGSSSPSLPEVVEERGQP
SIO_010081: LOC100257332
subclass of: SO_0000673
so part of: LOC100257332
location: join(435843..436156,436474..436626,437881..438016,439203..439304,440650..440769,440885..440965,446236..446576,446722..446967,447944..448268,448901..449134,449406..449669)
location: region:435843-449669:1
so has part: feature:435843-436156:1:exon
so has part: feature:436474-436626:1:exon
so has part: feature:437881-438016:1:exon
so has part: feature:439203-439304:1:exon
so has part: feature:440650-440769:1:exon
so has part: feature:440885-440965:1:exon
so has part: feature:446236-446576:1:exon
so has part: feature:446722-446967:1:exon
so has part: feature:447944-448268:1:exon
so has part: feature:448901-449134:1:exon
so has part: feature:449406-449669:1:exon

XP_010655370.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:435843-436156:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:436474-436626:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:437881-438016:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:439203-439304:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:440650-440769:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:440885-440965:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:446236-446576:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:446722-446967:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447944-448268:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:448901-449134:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:449406-449669:1:exon

LOC100250303
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100250303
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 460985..466886
location: region:460985-466886:1
so has part: feature:460985-466886:1:exon
subclass of: SO_0000010

100250303
type: Gene
SIO_000068: ncbigene

position:460985:1
position: 460985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466886:1
position: 466886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460985-466886:1:exon

LOC100250303
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100250303
product: lysine-specific demethylase JMJ25
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_010657070.2
SIO_010081: LOC100250303
subclass of: SO_0000673
so part of: LOC100250303
location: join(460985..461086,463002..463528,463614..463729,463823..463922,463999..464131,464217..464280,464366..465056,465190..465519,465625..465966,466051..466123,466210..466295,466380..466499,466589..466886)
location: region:460985-466886:1
so has part: feature:460985-461086:1:exon
so has part: feature:463002-463528:1:exon
so has part: feature:463614-463729:1:exon
so has part: feature:463823-463922:1:exon
so has part: feature:463999-464131:1:exon
so has part: feature:464217-464280:1:exon
so has part: feature:464366-465056:1:exon
so has part: feature:465190-465519:1:exon
so has part: feature:465625-465966:1:exon
so has part: feature:466051-466123:1:exon
so has part: feature:466210-466295:1:exon
so has part: feature:466380-466499:1:exon
so has part: feature:466589-466886:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:460985-461086:1:exon

position:461086:1
position: 461086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:463002-463528:1:exon

position:463002:1
position: 463002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463528:1
position: 463528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:463614-463729:1:exon

position:463614:1
position: 463614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463729:1
position: 463729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:463823-463922:1:exon

position:463823:1
position: 463823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463922:1
position: 463922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:463999-464131:1:exon

position:463999:1
position: 463999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464131:1
position: 464131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:464217-464280:1:exon

position:464217:1
position: 464217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464280:1
position: 464280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:464366-465056:1:exon

position:464366:1
position: 464366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465056:1
position: 465056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:465190-465519:1:exon

position:465190:1
position: 465190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465519:1
position: 465519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:465625-465966:1:exon

position:465625:1
position: 465625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465966:1
position: 465966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:466051-466123:1:exon

position:466051:1
position: 466051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466123:1
position: 466123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:466210-466295:1:exon

position:466210:1
position: 466210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466295:1
position: 466295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:466380-466499:1:exon

position:466380:1
position: 466380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466499:1
position: 466499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:466589-466886:1:exon

position:466589:1
position: 466589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100250303
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100250303
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase JMJ25
translation: MAVMFVKQELPIREPQRAPRNSKRKIQQRVKEENGGDDDPDYVDSPSRRGKSSVKKTKVTQEVKSSQAGRPSTLRWNPPNKERDTEDELVMTEWDESEAMVLMKIKSRKRKTENLDAVTMKKTGSSDREEKIFKSVNSMNPSSPSLTSTSSDSVLGSDGNSSCSSRRRAAMTKKGNGGDRLKCHQCMRSDRRIVVPCTKCKSKLYCIQCIKQWYPNMSEVEIAELCPFCRRNCNCNLCLHSSGIVKTVKTDISDGEKVQHLLYLIKTLFPYLKQIYEEQTEEIEVEANIQGIPSSGITIPVSSCPSDERVYCNHCATSIVDLHRSCPKCCYELCLSCCKEIRKGNLLRCTAVDFQYVERGFDYMHGEDPLPESYYMGTVGNDVEPLTEWNANKDGSIICAPKEMGGCGGSLLQLKHILPEDRILDLKERAEQVMMKFGTEQARNCSTNGSEMVKRASSREGTDDNYLYCPASHDILKEEEFLNFQRHWAKGEPVIVCNVLEQTTGLSWEPMVMWRALCENMDSKMSSKMSEVKAEECLSSCQVDISTRQFFKGYTEGRSYDNLWPEMLKLKDWPPSDKFENLLPRHCDEFISALPFQEYTDPRAGFLNLAVKLPNTILKPDLGPKTYIAYGIAEELGRGDSVTKLHCDMSDAVNILTHTAEVVLDDNQRLAVKRLKKKHQAQDKRENLVPPCQQEEDLPISRITVTENEDEEEGPYFPGFLPPGKTQKTGSALWDIFRREDVPKLQDYLRKHSKEFRHVFCSPVNRVVHPIHDQSFYLTLEHKKKLKEEYGIEPWTFEQRIGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENIHECIRLTEEFRQLPKNHRVREDKLEIKKMIVYAVAQSLKDFYLLASG
SIO_010081: LOC100250303
subclass of: SO_0000673
so part of: LOC100250303
location: join(463007..463528,463614..463729,463823..463922,463999..464131,464217..464280,464366..465056,465190..465519,465625..465966,466051..466123,466210..466295,466380..466499,466589..466657)
location: region:463007-466657:1
so has part: feature:463007-463528:1:exon
so has part: feature:463614-463729:1:exon
so has part: feature:463823-463922:1:exon
so has part: feature:463999-464131:1:exon
so has part: feature:464217-464280:1:exon
so has part: feature:464366-465056:1:exon
so has part: feature:465190-465519:1:exon
so has part: feature:465625-465966:1:exon
so has part: feature:466051-466123:1:exon
so has part: feature:466210-466295:1:exon
so has part: feature:466380-466499:1:exon
so has part: feature:466589-466657:1:exon

XP_010655372.1
type: Protein
SIO_000068: ncbiprotein

position:463007:1
position: 463007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466657:1
position: 466657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463007-463528:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:463614-463729:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:463823-463922:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:463999-464131:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:464217-464280:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:464366-465056:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:465190-465519:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:465625-465966:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:466051-466123:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:466210-466295:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:466380-466499:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:466589-466657:1:exon

LOC100255483
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100255483
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 477230..487975
location: region:477230-487975:1
so has part: feature:477230-487975:1:exon
subclass of: SO_0000010

100255483
type: Gene
SIO_000068: ncbigene

position:477230:1
position: 477230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487975:1
position: 487975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477230-487975:1:exon

LOC100255483
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100255483
product: leucine--tRNA ligase, chloroplastic/mitochondrial, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 117 samples with support for all annotated introns
transcript id: XM_002264102.3
SIO_010081: LOC100255483
subclass of: SO_0000673
so part of: LOC100255483
location: join(477230..477648,478559..478703,478794..478850,479723..479842,479931..480035,480161..480384,480509..480575,480656..480810,480986..481250,481405..481599,482435..482514,484138..484200,484359..484440,485005..485082,485152..485253,485376..485548,485762..485939,486562..486639,486924..487055,487337..487975)
location: region:477230-487975:1
so has part: feature:477230-477648:1:exon
so has part: feature:478559-478703:1:exon
so has part: feature:478794-478850:1:exon
so has part: feature:479723-479842:1:exon
so has part: feature:479931-480035:1:exon
so has part: feature:480161-480384:1:exon
so has part: feature:480509-480575:1:exon
so has part: feature:480656-480810:1:exon
so has part: feature:480986-481250:1:exon
so has part: feature:481405-481599:1:exon
so has part: feature:482435-482514:1:exon
so has part: feature:484138-484200:1:exon
so has part: feature:484359-484440:1:exon
so has part: feature:485005-485082:1:exon
so has part: feature:485152-485253:1:exon
so has part: feature:485376-485548:1:exon
so has part: feature:485762-485939:1:exon
so has part: feature:486562-486639:1:exon
so has part: feature:486924-487055:1:exon
so has part: feature:487337-487975:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:477230-477648:1:exon

position:477648:1
position: 477648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:478559-478703:1:exon

position:478559:1
position: 478559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478703:1
position: 478703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:478794-478850:1:exon

position:478794:1
position: 478794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478850:1
position: 478850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:479723-479842:1:exon

position:479723:1
position: 479723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479842:1
position: 479842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:479931-480035:1:exon

position:479931:1
position: 479931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480035:1
position: 480035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:480161-480384:1:exon

position:480161:1
position: 480161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480384:1
position: 480384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:480509-480575:1:exon

position:480509:1
position: 480509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480575:1
position: 480575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:480656-480810:1:exon

position:480656:1
position: 480656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480810:1
position: 480810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:480986-481250:1:exon

position:480986:1
position: 480986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481250:1
position: 481250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:481405-481599:1:exon

position:481405:1
position: 481405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481599:1
position: 481599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:482435-482514:1:exon

position:482435:1
position: 482435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:482514:1
position: 482514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:484138-484200:1:exon

position:484138:1
position: 484138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484200:1
position: 484200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:484359-484440:1:exon

position:484359:1
position: 484359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484440:1
position: 484440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:485005-485082:1:exon

position:485005:1
position: 485005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485082:1
position: 485082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:485152-485253:1:exon

position:485152:1
position: 485152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485253:1
position: 485253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:485376-485548:1:exon

position:485376:1
position: 485376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485548:1
position: 485548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:485762-485939:1:exon

position:485762:1
position: 485762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485939:1
position: 485939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:486562-486639:1:exon

position:486562:1
position: 486562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486639:1
position: 486639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:486924-487055:1:exon

position:486924:1
position: 486924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487055:1
position: 487055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:487337-487975:1:exon

position:487337:1
position: 487337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100255483
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100255483
product: leucine--tRNA ligase, chloroplastic/mitochondrial, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_019222720.1
SIO_010081: LOC100255483
subclass of: SO_0000673
so part of: LOC100255483
location: join(477230..477648,478559..478703,478794..478850,479931..480035,480161..480384,480509..480575,480656..480810,480986..481250,481405..481599,482435..482514,484138..484200,484359..484440,485005..485082,485152..485253,485376..485548,485762..485939,486562..486639,486924..487055,487337..487975)
location: region:477230-487975:1
so has part: feature:477230-477648:1:exon
so has part: feature:478559-478703:1:exon
so has part: feature:478794-478850:1:exon
so has part: feature:479931-480035:1:exon
so has part: feature:480161-480384:1:exon
so has part: feature:480509-480575:1:exon
so has part: feature:480656-480810:1:exon
so has part: feature:480986-481250:1:exon
so has part: feature:481405-481599:1:exon
so has part: feature:482435-482514:1:exon
so has part: feature:484138-484200:1:exon
so has part: feature:484359-484440:1:exon
so has part: feature:485005-485082:1:exon
so has part: feature:485152-485253:1:exon
so has part: feature:485376-485548:1:exon
so has part: feature:485762-485939:1:exon
so has part: feature:486562-486639:1:exon
so has part: feature:486924-487055:1:exon
so has part: feature:487337-487975:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:477230-477648:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:478559-478703:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:478794-478850:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:479931-480035:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:480161-480384:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:480509-480575:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:480656-480810:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:480986-481250:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:481405-481599:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:482435-482514:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:484138-484200:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:484359-484440:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:485005-485082:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:485152-485253:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:485376-485548:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:485762-485939:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:486562-486639:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:486924-487055:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:487337-487975:1:exon

LOC100255483
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100255483
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine--tRNA ligase, chloroplastic/mitochondrial isoform X1
translation: MLHTQLHIQLLQPPPLHRHALSFSAYSRRKFTTTSSATTVAVGKSYFGNGVWNGVSRSIRNSATKELSEVEGQDRKEPIRRAYPFHEIEPRWQRFWEENRTFRTPDDVDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARFKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTTRNIARFRSQLKSLGFSYDWEREISTIEPEYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDGVSERGGHPVIRKPMRQWILKITAYADRLLEDLDDLNWPESVKEMQRNWIGRSEGAEVEFCVLNSDGQESDNKITVYTTRPDTIFGATYLVLAPEHFLLSSLVSTVQSKYVEEYKEIASRKSDLERTELQKEKTGVFSGAYARNPANGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDHEFALKYDIPICWVVTPNDINGDDFEKPYPGEGLIINSSSSTTGLDINGLSSKVAASKVIEWAEKTVHGKKKVNYKLRDWLFARQRYWGEPIPVSFLDDSGERVPLPETELPLTLPELDDFTPTGTGEPPLSKAVSWVKTTDPLSGKPARRETSTMPQWAGSCWYYLRFMDPKNSDSLVDKKKEMYWSPVDVYVGGAEHAVLHLLYSRFWHKVLYDIGVVSTKEPFKCVINQGIILGEVQYMACKDQDGNYISAETAATLGEQAQERIPEEKVTKSGEYFVLKENPDIRLIARAHKMSKSRGNVINPDDVVLEYGADSLRLYEMFMGPFRDSKVWNTSGIEGVHRFLGRTWRLIVGAPLPNGAYSDGTVVVDGEPTVDQLRSLHRCIDKVTEEIDGTRFNTGISAMMEFINAAYKWDKHPRSIIEAFVLLLSPYAPHMAEELWFRLGHKSSLAYETFPKANPTYLKDSTIVLPVQINGKMRGTIEVEEGCAEEDAFNLASSDERLSKFLDGKSIKKRIYVPGKILNVILDSKNVKVGTR
SIO_010081: LOC100255483
subclass of: SO_0000673
so part of: LOC100255483
location: join(477275..477648,478559..478703,478794..478850,479723..479842,479931..480035,480161..480384,480509..480575,480656..480810,480986..481250,481405..481599,482435..482514,484138..484200,484359..484440,485005..485082,485152..485253,485376..485548,485762..485939,486562..486639,486924..487055,487337..487579)
location: region:477275-487579:1
so has part: feature:477275-477648:1:exon
so has part: feature:478559-478703:1:exon
so has part: feature:478794-478850:1:exon
so has part: feature:479723-479842:1:exon
so has part: feature:479931-480035:1:exon
so has part: feature:480161-480384:1:exon
so has part: feature:480509-480575:1:exon
so has part: feature:480656-480810:1:exon
so has part: feature:480986-481250:1:exon
so has part: feature:481405-481599:1:exon
so has part: feature:482435-482514:1:exon
so has part: feature:484138-484200:1:exon
so has part: feature:484359-484440:1:exon
so has part: feature:485005-485082:1:exon
so has part: feature:485152-485253:1:exon
so has part: feature:485376-485548:1:exon
so has part: feature:485762-485939:1:exon
so has part: feature:486562-486639:1:exon
so has part: feature:486924-487055:1:exon
so has part: feature:487337-487579:1:exon

XP_002264138.1
type: Protein
SIO_000068: ncbiprotein

position:477275:1
position: 477275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487579:1
position: 487579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477275-477648:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:478559-478703:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:478794-478850:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:479723-479842:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:479931-480035:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:480161-480384:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:480509-480575:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:480656-480810:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:480986-481250:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:481405-481599:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:482435-482514:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:484138-484200:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:484359-484440:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:485005-485082:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:485152-485253:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:485376-485548:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:485762-485939:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:486562-486639:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:486924-487055:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:487337-487579:1:exon

LOC100255483
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100255483
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine--tRNA ligase, chloroplastic/mitochondrial isoform X2
translation: MLHTQLHIQLLQPPPLHRHALSFSAYSRRKFTTTSSATTVAVGKSYFGNGVWNGVSRSIRNSATKELSEVEGQDRKEPIRRAYPFHEIEPRWQRFWEENRTFRTPDDVDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARFKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTTRNIARFRSQAEVPVNWCPALGTVLANEEVVDGVSERGGHPVIRKPMRQWILKITAYADRLLEDLDDLNWPESVKEMQRNWIGRSEGAEVEFCVLNSDGQESDNKITVYTTRPDTIFGATYLVLAPEHFLLSSLVSTVQSKYVEEYKEIASRKSDLERTELQKEKTGVFSGAYARNPANGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDHEFALKYDIPICWVVTPNDINGDDFEKPYPGEGLIINSSSSTTGLDINGLSSKVAASKVIEWAEKTVHGKKKVNYKLRDWLFARQRYWGEPIPVSFLDDSGERVPLPETELPLTLPELDDFTPTGTGEPPLSKAVSWVKTTDPLSGKPARRETSTMPQWAGSCWYYLRFMDPKNSDSLVDKKKEMYWSPVDVYVGGAEHAVLHLLYSRFWHKVLYDIGVVSTKEPFKCVINQGIILGEVQYMACKDQDGNYISAETAATLGEQAQERIPEEKVTKSGEYFVLKENPDIRLIARAHKMSKSRGNVINPDDVVLEYGADSLRLYEMFMGPFRDSKVWNTSGIEGVHRFLGRTWRLIVGAPLPNGAYSDGTVVVDGEPTVDQLRSLHRCIDKVTEEIDGTRFNTGISAMMEFINAAYKWDKHPRSIIEAFVLLLSPYAPHMAEELWFRLGHKSSLAYETFPKANPTYLKDSTIVLPVQINGKMRGTIEVEEGCAEEDAFNLASSDERLSKFLDGKSIKKRIYVPGKILNVILDSKNVKVGTR
SIO_010081: LOC100255483
subclass of: SO_0000673
so part of: LOC100255483
location: join(477275..477648,478559..478703,478794..478850,479931..480035,480161..480384,480509..480575,480656..480810,480986..481250,481405..481599,482435..482514,484138..484200,484359..484440,485005..485082,485152..485253,485376..485548,485762..485939,486562..486639,486924..487055,487337..487579)
location: region:477275-487579:1
so has part: feature:477275-477648:1:exon
so has part: feature:478559-478703:1:exon
so has part: feature:478794-478850:1:exon
so has part: feature:479931-480035:1:exon
so has part: feature:480161-480384:1:exon
so has part: feature:480509-480575:1:exon
so has part: feature:480656-480810:1:exon
so has part: feature:480986-481250:1:exon
so has part: feature:481405-481599:1:exon
so has part: feature:482435-482514:1:exon
so has part: feature:484138-484200:1:exon
so has part: feature:484359-484440:1:exon
so has part: feature:485005-485082:1:exon
so has part: feature:485152-485253:1:exon
so has part: feature:485376-485548:1:exon
so has part: feature:485762-485939:1:exon
so has part: feature:486562-486639:1:exon
so has part: feature:486924-487055:1:exon
so has part: feature:487337-487579:1:exon

XP_019078265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:477275-477648:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:478559-478703:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:478794-478850:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:479931-480035:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:480161-480384:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:480509-480575:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:480656-480810:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:480986-481250:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:481405-481599:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:482435-482514:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:484138-484200:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:484359-484440:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:485005-485082:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:485152-485253:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:485376-485548:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:485762-485939:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:486562-486639:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:486924-487055:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:487337-487579:1:exon

LOC100262450
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100262450
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 488495..496714
location: region:488495-496714:1
so has part: feature:488495-496714:1:exon
subclass of: SO_0000010

100262450
type: Gene
SIO_000068: ncbigene

position:488495:1
position: 488495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496714:1
position: 496714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488495-496714:1:exon

LOC100262450
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100262450
product: uncharacterized LOC100262450, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_019222652.1
SIO_010081: LOC100262450
subclass of: SO_0000673
so part of: LOC100262450
location: join(488495..488673,488766..489052,489148..489264,489991..490091,492192..492263,492430..492511,492822..492902,493658..493699,495002..495148,496308..496714)
location: region:488495-496714:1
so has part: feature:488495-488673:1:exon
so has part: feature:488766-489052:1:exon
so has part: feature:489148-489264:1:exon
so has part: feature:489991-490091:1:exon
so has part: feature:492192-492263:1:exon
so has part: feature:492430-492511:1:exon
so has part: feature:492822-492902:1:exon
so has part: feature:493658-493699:1:exon
so has part: feature:495002-495148:1:exon
so has part: feature:496308-496714:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:488495-488673:1:exon

position:488673:1
position: 488673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:488766-489052:1:exon

position:488766:1
position: 488766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489052:1
position: 489052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:489148-489264:1:exon

position:489148:1
position: 489148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489264:1
position: 489264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:489991-490091:1:exon

position:489991:1
position: 489991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490091:1
position: 490091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:492192-492263:1:exon

position:492192:1
position: 492192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492263:1
position: 492263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:492430-492511:1:exon

position:492430:1
position: 492430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492511:1
position: 492511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:492822-492902:1:exon

position:492822:1
position: 492822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492902:1
position: 492902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:493658-493699:1:exon

position:493658:1
position: 493658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493699:1
position: 493699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:495002-495148:1:exon

position:495002:1
position: 495002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495148:1
position: 495148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:496308-496714:1:exon

position:496308:1
position: 496308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100262450
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100262450
product: uncharacterized LOC100262450, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_002264101.4
SIO_010081: LOC100262450
subclass of: SO_0000673
so part of: LOC100262450
location: join(488496..488673,488766..489052,489148..489264,489991..490091,492192..492263,492430..492511,492822..492902,493658..493699,494757..494816,495002..495148,496308..496714)
location: region:488496-496714:1
so has part: feature:488496-488673:1:exon
so has part: feature:488766-489052:1:exon
so has part: feature:489148-489264:1:exon
so has part: feature:489991-490091:1:exon
so has part: feature:492192-492263:1:exon
so has part: feature:492430-492511:1:exon
so has part: feature:492822-492902:1:exon
so has part: feature:493658-493699:1:exon
so has part: feature:494757-494816:1:exon
so has part: feature:495002-495148:1:exon
so has part: feature:496308-496714:1:exon

position:488496:1
position: 488496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488496-488673:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:488766-489052:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:489148-489264:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:489991-490091:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:492192-492263:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:492430-492511:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:492822-492902:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:493658-493699:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:494757-494816:1:exon

position:494757:1
position: 494757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494816:1
position: 494816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:495002-495148:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:496308-496714:1:exon

LOC100262450
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100262450
product: uncharacterized LOC100262450, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 113 samples with support for all annotated introns
transcript id: XM_010657073.2
SIO_010081: LOC100262450
subclass of: SO_0000673
so part of: LOC100262450
location: join(488497..488646,488766..489052,489148..489264,489991..490091,492192..492263,492430..492511,492822..492902,493658..493699,494757..494816,495002..495148,496308..496714)
location: region:488497-496714:1
so has part: feature:488497-488646:1:exon
so has part: feature:488766-489052:1:exon
so has part: feature:489148-489264:1:exon
so has part: feature:489991-490091:1:exon
so has part: feature:492192-492263:1:exon
so has part: feature:492430-492511:1:exon
so has part: feature:492822-492902:1:exon
so has part: feature:493658-493699:1:exon
so has part: feature:494757-494816:1:exon
so has part: feature:495002-495148:1:exon
so has part: feature:496308-496714:1:exon

position:488497:1
position: 488497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488497-488646:1:exon

position:488646:1
position: 488646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:488766-489052:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:489148-489264:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:489991-490091:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:492192-492263:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:492430-492511:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:492822-492902:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:493658-493699:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:494757-494816:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:495002-495148:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:496308-496714:1:exon

LOC100262450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100262450
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100262450 isoform X1
translation: MLLSGRNRGQGRAMTKKAPSFSIRHVFWFGWKLVILVSVALCVLALLRLQSNSELSSISLPPQGPRFYRVSVYQGNPKIAFLFLVRRSLPLDFLWGSFFENADAANFSIYIHSQPGFVFDETTSRSRFFYNRQLSNSIQVAWGESSMIQAERLLFEAALEDPANQRFVLLSDSCVPLYNFSYIYNYMMASPRSYVDSFLDVKEGRYNPKMSPVIPKAKWRKGSQWISLVRSHAEVIVDDQVIFSVFKKFCKRRPPIDARKGKQNIKLQKQHNCIPDEHYVQTLLAMSELESELERRTLTYTEWNLSVTKMEREGWHPITFSYANAGPQRIKEIKDVNHVYYETEFRTEWCRANSTSVPCFLFARKFSRGAAMRLLSEGVVGSFDVTAFFDAPS
SIO_010081: LOC100262450
subclass of: SO_0000673
so part of: LOC100262450
location: join(488661..488673,488766..489052,489148..489264,489991..490091,492192..492263,492430..492511,492822..492902,493658..493699,494757..494816,495002..495148,496308..496487)
location: region:488661-496487:1
so has part: feature:488661-488673:1:exon
so has part: feature:488766-489052:1:exon
so has part: feature:489148-489264:1:exon
so has part: feature:489991-490091:1:exon
so has part: feature:492192-492263:1:exon
so has part: feature:492430-492511:1:exon
so has part: feature:492822-492902:1:exon
so has part: feature:493658-493699:1:exon
so has part: feature:494757-494816:1:exon
so has part: feature:495002-495148:1:exon
so has part: feature:496308-496487:1:exon

XP_002264137.2
type: Protein
SIO_000068: ncbiprotein

position:488661:1
position: 488661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496487:1
position: 496487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488661-488673:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:488766-489052:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:489148-489264:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:489991-490091:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:492192-492263:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:492430-492511:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:492822-492902:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:493658-493699:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:494757-494816:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:495002-495148:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:496308-496487:1:exon

LOC100262450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100262450
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100262450 isoform X3
translation: MLLSGRNRGQGRAMTKKAPSFSIRHVFWFGWKLVILVSVALCVLALLRLQSNSELSSISLPPQGPRFYRVSVYQGNPKIAFLFLVRRSLPLDFLWGSFFENADAANFSIYIHSQPGFVFDETTSRSRFFYNRQLSNSIQVAWGESSMIQAERLLFEAALEDPANQRFVLLSDSCVPLYNFSYIYNYMMASPRSYVDSFLDVKEGRYNPKMSPVIPKAKWRKGSQWISLVRSHAEVIVDDQVIFSVFKKFCKRRPPIDARKGKQNIMSELESELERRTLTYTEWNLSVTKMEREGWHPITFSYANAGPQRIKEIKDVNHVYYETEFRTEWCRANSTSVPCFLFARKFSRGAAMRLLSEGVVGSFDVTAFFDAPS
SIO_010081: LOC100262450
subclass of: SO_0000673
so part of: LOC100262450
location: join(488661..488673,488766..489052,489148..489264,489991..490091,492192..492263,492430..492511,492822..492902,493658..493699,495002..495148,496308..496487)
location: region:488661-496487:1
so has part: feature:488661-488673:1:exon
so has part: feature:488766-489052:1:exon
so has part: feature:489148-489264:1:exon
so has part: feature:489991-490091:1:exon
so has part: feature:492192-492263:1:exon
so has part: feature:492430-492511:1:exon
so has part: feature:492822-492902:1:exon
so has part: feature:493658-493699:1:exon
so has part: feature:495002-495148:1:exon
so has part: feature:496308-496487:1:exon

XP_019078197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:488661-488673:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:488766-489052:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:489148-489264:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:489991-490091:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:492192-492263:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:492430-492511:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:492822-492902:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:493658-493699:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:495002-495148:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:496308-496487:1:exon

LOC100262450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100262450
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100262450 isoform X2
translation: MTKKAPSFSIRHVFWFGWKLVILVSVALCVLALLRLQSNSELSSISLPPQGPRFYRVSVYQGNPKIAFLFLVRRSLPLDFLWGSFFENADAANFSIYIHSQPGFVFDETTSRSRFFYNRQLSNSIQVAWGESSMIQAERLLFEAALEDPANQRFVLLSDSCVPLYNFSYIYNYMMASPRSYVDSFLDVKEGRYNPKMSPVIPKAKWRKGSQWISLVRSHAEVIVDDQVIFSVFKKFCKRRPPIDARKGKQNIKLQKQHNCIPDEHYVQTLLAMSELESELERRTLTYTEWNLSVTKMEREGWHPITFSYANAGPQRIKEIKDVNHVYYETEFRTEWCRANSTSVPCFLFARKFSRGAAMRLLSEGVVGSFDVTAFFDAPS
SIO_010081: LOC100262450
subclass of: SO_0000673
so part of: LOC100262450
location: join(488792..489052,489148..489264,489991..490091,492192..492263,492430..492511,492822..492902,493658..493699,494757..494816,495002..495148,496308..496487)
location: region:488792-496487:1
so has part: feature:488792-489052:1:exon
so has part: feature:489148-489264:1:exon
so has part: feature:489991-490091:1:exon
so has part: feature:492192-492263:1:exon
so has part: feature:492430-492511:1:exon
so has part: feature:492822-492902:1:exon
so has part: feature:493658-493699:1:exon
so has part: feature:494757-494816:1:exon
so has part: feature:495002-495148:1:exon
so has part: feature:496308-496487:1:exon

XP_010655375.1
type: Protein
SIO_000068: ncbiprotein

position:488792:1
position: 488792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488792-489052:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:489148-489264:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:489991-490091:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:492192-492263:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:492430-492511:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:492822-492902:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:493658-493699:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:494757-494816:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:495002-495148:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:496308-496487:1:exon

LOC100853242
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100853242
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(496823..500373)
location: region:496823-500373:-1
so has part: feature:496823-500373:-1:exon
subclass of: SO_0000010

100853242
type: Gene
SIO_000068: ncbigene

position:496823:-1
position: 496823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500373:-1
position: 500373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:496823-500373:-1:exon

LOC100853242
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100853242
product: uncharacterized LOC100853242
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 165 samples with support for all annotated introns
transcript id: XM_010657072.2
SIO_010081: LOC100853242
subclass of: SO_0000673
so part of: LOC100853242
location: complement(join(496823..497322,498860..498883,500150..500373))
location: region:496823-500373:-1
so has part: feature:500150-500373:-1:exon
so has part: feature:498860-498883:-1:exon
so has part: feature:496823-497322:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:500150-500373:-1:exon

position:500150:-1
position: 500150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:498860-498883:-1:exon

position:498860:-1
position: 498860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498883:-1
position: 498883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:496823-497322:-1:exon

position:497322:-1
position: 497322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100853242
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100853242
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100853242
translation: MNPSQRLLKVAMTVLGLCLAAYIVAPPLYWHITEGVAAVSRDSFSCPPCLCDCSSHPLLSIPEGLSNNSFTDCMKHDPEVSEDLERSFTDLLSEELKLREAEAQENQQRADMALLEAKKMASQYQKEADKCNMGMETCEEAREKAEATLDIQRKLTAMWEFRARQRGWKGGPIKPRS
SIO_010081: LOC100853242
subclass of: SO_0000673
so part of: LOC100853242
location: complement(join(497003..497322,498860..498883,500150..500339))
location: region:497003-500339:-1
so has part: feature:500150-500339:-1:exon
so has part: feature:498860-498883:-1:exon
so has part: feature:497003-497322:-1:exon

XP_010655374.1
type: Protein
SIO_000068: ncbiprotein

position:497003:-1
position: 497003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500339:-1
position: 500339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500150-500339:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:498860-498883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:497003-497322:-1:exon

LOC109121416
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC109121416
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(497705..502996)
location: region:497705-502996:-1
so has part: feature:497705-502996:-1:exon
subclass of: SO_0000010

109121416
type: Gene
SIO_000068: ncbigene

position:497705:-1
position: 497705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502996:-1
position: 502996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497705-502996:-1:exon

LOC109121416
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC109121416
product: pentatricopeptide repeat-containing protein At4g04370, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_019222651.1
SIO_010081: LOC109121416
subclass of: SO_0000673
so part of: LOC109121416
location: complement(join(497705..498765,498860..498883,500150..502996))
location: region:497705-502996:-1
so has part: feature:500150-502996:-1:exon
so has part: feature:498860-498883:-1:exon
so has part: feature:497705-498765:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:500150-502996:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:498860-498883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:497705-498765:-1:exon

position:498765:-1
position: 498765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109121416
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC109121416
product: pentatricopeptide repeat-containing protein At4g04370, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 206 samples with support for all annotated introns
transcript id: XM_019222650.1
SIO_010081: LOC109121416
subclass of: SO_0000673
so part of: LOC109121416
location: complement(join(497705..498883,500150..502996))
location: region:497705-502996:-1
so has part: feature:500150-502996:-1:exon
so has part: feature:497705-498883:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:500150-502996:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:497705-498883:-1:exon

LOC109121416
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC109121416
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein At4g04370
translation: MSRAKPSFLNPATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKPANAGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTITTFFTDHSSHPQFEEIMLVLKILGSEMRKVGIHD
SIO_010081: LOC109121416
subclass of: SO_0000673
so part of: LOC109121416
location: complement(500687..502885)
location: region:500687-502885:-1
so has part: feature:500687-502885:-1:exon

XP_019078195.1
type: Protein
SIO_000068: ncbiprotein

position:500687:-1
position: 500687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502885:-1
position: 502885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500687-502885:-1:exon

LOC109121416
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC109121416
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein At4g04370
translation: MSRAKPSFLNPATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKPANAGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTITTFFTDHSSHPQFEEIMLVLKILGSEMRKVGIHD
SIO_010081: LOC109121416
subclass of: SO_0000673
so part of: LOC109121416
location: complement(500687..502885)
location: region:500687-502885:-1
so has part: feature:500687-502885:-1:exon

XP_019078196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:500687-502885:-1:exon

LOC100245299
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100245299
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(503108..507194)
location: region:503108-507194:-1
so has part: feature:503108-507194:-1:exon
subclass of: SO_0000010

100245299
type: Gene
SIO_000068: ncbigene

position:503108:-1
position: 503108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507194:-1
position: 507194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:503108-507194:-1:exon

LOC100245299
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100245299
product: proline synthase co-transcribed bacterial homolog protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 253 samples with support for all annotated introns
transcript id: XM_002263731.3
SIO_010081: LOC100245299
subclass of: SO_0000673
so part of: LOC100245299
location: complement(join(503108..503611,504003..504101,504212..504345,504617..504704,505564..505610,506507..506573,506871..507194))
location: region:503108-507194:-1
so has part: feature:506871-507194:-1:exon
so has part: feature:506507-506573:-1:exon
so has part: feature:505564-505610:-1:exon
so has part: feature:504617-504704:-1:exon
so has part: feature:504212-504345:-1:exon
so has part: feature:504003-504101:-1:exon
so has part: feature:503108-503611:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:506871-507194:-1:exon

position:506871:-1
position: 506871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:506507-506573:-1:exon

position:506507:-1
position: 506507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:506573:-1
position: 506573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:505564-505610:-1:exon

position:505564:-1
position: 505564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505610:-1
position: 505610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:504617-504704:-1:exon

position:504617:-1
position: 504617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504704:-1
position: 504704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:504212-504345:-1:exon

position:504212:-1
position: 504212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504345:-1
position: 504345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:504003-504101:-1:exon

position:504003:-1
position: 504003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504101:-1
position: 504101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:503108-503611:-1:exon

position:503611:-1
position: 503611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100245299
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100245299
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline synthase co-transcribed bacterial homolog protein isoform X1
translation: MRMRAWAEEPRPMNNLESRDGERAEEAEQSSMAASAMDGVAAAALRSVLHRVQQAAERSGRGPHQIRVVAVSKTKSVSLIREVYDSGHRCFGENYVQEIIEKAPQLPEDIEWHFIGNLQSNKVKPLLTGVPNLAVVETVDDEKIADRLDRMVATIGRKPLKVMVQVNTSGEESKSGVDPAACVELVKHVALGCPNLEFGGLMTIGMLDYTSTPENFKTLANCRSEVCKSLGITEEQCELSMGMSGDFELAIEMGSTNVRIGSTIFGAREYPKKQPK
SIO_010081: LOC100245299
subclass of: SO_0000673
so part of: LOC100245299
location: complement(join(503531..503611,504003..504101,504212..504345,504617..504704,505564..505610,506507..506573,506871..507185))
location: region:503531-507185:-1
so has part: feature:506871-507185:-1:exon
so has part: feature:506507-506573:-1:exon
so has part: feature:505564-505610:-1:exon
so has part: feature:504617-504704:-1:exon
so has part: feature:504212-504345:-1:exon
so has part: feature:504003-504101:-1:exon
so has part: feature:503531-503611:-1:exon

XP_002263767.3
type: Protein
SIO_000068: ncbiprotein

position:503531:-1
position: 503531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507185:-1
position: 507185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506871-507185:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:506507-506573:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:505564-505610:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:504617-504704:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:504212-504345:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:504003-504101:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:503531-503611:-1:exon

LOC100245299
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100245299
product: proline synthase co-transcribed bacterial homolog protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 96 samples with support for all annotated introns
transcript id: XM_019222653.1
SIO_010081: LOC100245299
subclass of: SO_0000673
so part of: LOC100245299
location: complement(join(503832..503858,504003..504101,504212..504345,504617..504704,505564..505610,506507..506573,506871..507194))
location: region:503832-507194:-1
so has part: feature:506871-507194:-1:exon
so has part: feature:506507-506573:-1:exon
so has part: feature:505564-505610:-1:exon
so has part: feature:504617-504704:-1:exon
so has part: feature:504212-504345:-1:exon
so has part: feature:504003-504101:-1:exon
so has part: feature:503832-503858:-1:exon

position:503832:-1
position: 503832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506871-507194:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:506507-506573:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:505564-505610:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:504617-504704:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:504212-504345:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:504003-504101:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:503832-503858:-1:exon

position:503858:-1
position: 503858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100245299
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100245299
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline synthase co-transcribed bacterial homolog protein isoform X2
translation: MRMRAWAEEPRPMNNLESRDGERAEEAEQSSMAASAMDGVAAAALRSVLHRVQQAAERSGRGPHQIRVVAVSKTKSVSLIREVYDSGHRCFGENYVQEIIEKAPQLPEDIEWHFIGNLQSNKVKPLLTGVPNLAVVETVDDEKIADRLDRMVATIGRKPLKVMVQVNTSGEESKSGVDPAACVELVKHVALGCPNLEFGGLMTIGMLDYTSTPENFKTLANCRSEVCKSLGITEEQCELSMGMSGDFELAGKN
SIO_010081: LOC100245299
subclass of: SO_0000673
so part of: LOC100245299
location: complement(join(503847..503858,504003..504101,504212..504345,504617..504704,505564..505610,506507..506573,506871..507185))
location: region:503847-507185:-1
so has part: feature:506871-507185:-1:exon
so has part: feature:506507-506573:-1:exon
so has part: feature:505564-505610:-1:exon
so has part: feature:504617-504704:-1:exon
so has part: feature:504212-504345:-1:exon
so has part: feature:504003-504101:-1:exon
so has part: feature:503847-503858:-1:exon

XP_019078198.1
type: Protein
SIO_000068: ncbiprotein

position:503847:-1
position: 503847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506871-507185:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:506507-506573:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:505564-505610:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:504617-504704:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:504212-504345:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:504003-504101:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:503847-503858:-1:exon

LOC100260556
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100260556
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(507749..508892)
location: region:507749-508892:-1
so has part: feature:507749-508892:-1:exon
subclass of: SO_0000010

100260556
type: Gene
SIO_000068: ncbigene

position:507749:-1
position: 507749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508892:-1
position: 508892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507749-508892:-1:exon

LOC100260556
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100260556
product: cytochrome b561 and DOMON domain-containing protein At3g25290
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_002264072.2
SIO_010081: LOC100260556
subclass of: SO_0000673
so part of: LOC100260556
location: complement(join(507749..508081,508179..508433,508522..508892))
location: region:507749-508892:-1
so has part: feature:508522-508892:-1:exon
so has part: feature:508179-508433:-1:exon
so has part: feature:507749-508081:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:508522-508892:-1:exon

position:508522:-1
position: 508522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:508179-508433:-1:exon

position:508179:-1
position: 508179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508433:-1
position: 508433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:507749-508081:-1:exon

position:508081:-1
position: 508081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100260556
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100260556
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome b561 and DOMON domain-containing protein At3g25290
translation: MSMTSHSLIILGLFFSLPSTIALYLTTAREVYELPTPATSQKTDTGVTTDLSWQRRRVWHHRHHLRNVHGILNIIGWGTLLPLGAIIARYFRKFPMECSEWFTLHILCQTLGYLLGSLGWAIGIWLGNSSINYTFHSHRVLGIIIFTFSTLQMFSIALQPRRENKCRKYWEICHRLLGYVLMVLIMTNIFVGINHQSPAAKWIWFYVGVLVVMGLVSIALEIVRWIKLVQNQTVLLNSSIYAANS
SIO_010081: LOC100260556
subclass of: SO_0000673
so part of: LOC100260556
location: complement(join(507800..508081,508179..508433,508522..508722))
location: region:507800-508722:-1
so has part: feature:508522-508722:-1:exon
so has part: feature:508179-508433:-1:exon
so has part: feature:507800-508081:-1:exon

XP_002264108.2
type: Protein
SIO_000068: ncbiprotein

position:507800:-1
position: 507800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508722:-1
position: 508722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508522-508722:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:508179-508433:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:507800-508081:-1:exon

LOC100243449
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100243449
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(509375..510038)
location: region:509375-510038:-1
so has part: feature:509375-510038:-1:exon
subclass of: SO_0000010

100243449
type: Gene
SIO_000068: ncbigene

position:509375:-1
position: 509375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510038:-1
position: 510038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509375-510038:-1:exon

LOC100243449
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100243449
product: protein STIG1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_002263619.4
SIO_010081: LOC100243449
subclass of: SO_0000673
so part of: LOC100243449
location: complement(509375..510038)
location: region:509375-510038:-1
so has part: feature:509375-510038:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:509375-510038:-1:exon

LOC100243449
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100243449
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein STIG1-like
translation: MAMKLLKLLFILSITTSTVSAASSGNENNDDNSIVGAAWSADENKEDSAVESHLALPESPESYIALPEGEETTSSDGTSDFMFQNKHLTCDKFPPICRRKSSPGPDCCKKKCVNIGKDPNNCGQCGRKCKHGDICCRGHCVNPSVDPLNCGRCGNKCKKWETCLYGMCSYA
SIO_010081: LOC100243449
subclass of: SO_0000673
so part of: LOC100243449
location: complement(509468..509983)
location: region:509468-509983:-1
so has part: feature:509468-509983:-1:exon

XP_002263655.1
type: Protein
SIO_000068: ncbiprotein

position:509468:-1
position: 509468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509983:-1
position: 509983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509468-509983:-1:exon

LOC100248583
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100248583
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 510729..511499
location: region:510729-511499:1
so has part: feature:510729-511499:1:exon
subclass of: SO_0000010

100248583
type: Gene
SIO_000068: ncbigene

position:510729:1
position: 510729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511499:1
position: 511499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510729-511499:1:exon

LOC100248583
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100248583
product: protein STIG1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 mRNAs, 14 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_002263547.4
SIO_010081: LOC100248583
subclass of: SO_0000673
so part of: LOC100248583
location: 510729..511499
location: region:510729-511499:1
so has part: feature:510729-511499:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:510729-511499:1:exon

LOC100248583
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100248583
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein STIG1-like
translation: MAMKLLKLLFILFITTSTVSAASSGNENNEDNSIVGAAWSADENKEDSAVESHLALPGSPESYIALPEGEETTSSDGTSDFMFQNKHLTCDEFPPLCRRKSSPGPDCCKKKCVNIGKDPNNCGKCGRKCKHGDICCRGHCVNPSVDPLNCGGCGKKCKKWETCLYGMCSYA
SIO_010081: LOC100248583
subclass of: SO_0000673
so part of: LOC100248583
location: 510786..511301
location: region:510786-511301:1
so has part: feature:510786-511301:1:exon

XP_002263583.1
type: Protein
SIO_000068: ncbiprotein

position:510786:1
position: 510786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511301:1
position: 511301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510786-511301:1:exon

LOC100264003
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100264003
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 528816..529728
location: region:528816-529728:1
so has part: feature:528816-529728:1:exon
subclass of: SO_0000010

100264003
type: Gene
SIO_000068: ncbigene

position:528816:1
position: 528816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529728:1
position: 529728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528816-529728:1:exon

LOC100264003
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100264003
product: stigma-specific STIG1-like protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_002263848.3
SIO_010081: LOC100264003
subclass of: SO_0000673
so part of: LOC100264003
location: 528816..529728
location: region:528816-529728:1
so has part: feature:528816-529728:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:528816-529728:1:exon

LOC100264003
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100264003
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stigma-specific STIG1-like protein 1
translation: MKSLKLVILMLALLLVMAAVRSVSSAEEEDFMFDLDQDDSIAAEAENSDQLPLLESEQPISLRGTSRFLTEAARIKVTCDKYPTVCRAKGSAGKYCCKKKCVNVRTDRLNCGACGKKCRYSEICCKGECVNPSSDRRNCGGCGKKCKKGSLCVHGMCSYS
SIO_010081: LOC100264003
subclass of: SO_0000673
so part of: LOC100264003
location: 528865..529347
location: region:528865-529347:1
so has part: feature:528865-529347:1:exon

XP_002263884.1
type: Protein
SIO_000068: ncbiprotein

position:528865:1
position: 528865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529347:1
position: 529347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528865-529347:1:exon

LOC109123274
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC109123274
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 539092..542970
location: region:539092-542970:1
so has part: feature:539092-542970:1:exon
subclass of: SO_0000010

109123274
type: Gene
SIO_000068: ncbigene

position:539092:1
position: 539092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542970:1
position: 542970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539092-542970:1:exon

LOC109123274
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC109123274
product: uncharacterized LOC109123274
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_019222512.1
SIO_010081: LOC109123274
subclass of: SO_0000673
so part of: LOC109123274
location: join(539092..539284,541446..541595,541656..541799,542813..542970)
location: region:539092-542970:1
so has part: feature:539092-539284:1:exon
so has part: feature:541446-541595:1:exon
so has part: feature:541656-541799:1:exon
so has part: feature:542813-542970:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:539092-539284:1:exon

position:539284:1
position: 539284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:541446-541595:1:exon

position:541446:1
position: 541446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541595:1
position: 541595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:541656-541799:1:exon

position:541656:1
position: 541656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541799:1
position: 541799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:542813-542970:1:exon

position:542813:1
position: 542813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109123274
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC109123274
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109123274
translation: MAYAYAAITTLEVPNQNSNEQQKFCFTPEEFHKLMALANSVQPNSSDQNNVQLAVNLVSISHFSEVYMELPIGLAVQGEQKVCRLLKSLYGLKQASKQWYAKLSQAILSYGFVQVYVDDVLLASDSILEIERLETFLDAKFTIKDLGPLKYFLGLEVARSKTVSAIHFPLRPLFLGVFHQFQILLILNTSDIQHSEGVKKHVDLDGFGATCHMF
SIO_010081: LOC109123274
subclass of: SO_0000673
so part of: LOC109123274
location: join(539092..539284,541446..541595,541656..541799,542813..542970)
location: region:539092-542970:1
so has part: feature:539092-539284:1:exon
so has part: feature:541446-541595:1:exon
so has part: feature:541656-541799:1:exon
so has part: feature:542813-542970:1:exon

XP_019078057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:539092-539284:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:541446-541595:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:541656-541799:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:542813-542970:1:exon

LOC100252198
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100252198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 556938..557855
location: region:556938-557855:1
so has part: feature:556938-557855:1:exon
subclass of: SO_0000010

100252198
type: Gene
SIO_000068: ncbigene

position:556938:1
position: 556938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557855:1
position: 557855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556938-557855:1:exon

LOC100252198
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100252198
product: stigma-specific STIG1-like protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_002263732.3
SIO_010081: LOC100252198
subclass of: SO_0000673
so part of: LOC100252198
location: 556938..557855
location: region:556938-557855:1
so has part: feature:556938-557855:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:556938-557855:1:exon

LOC100252198
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100252198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stigma-specific STIG1-like protein 1
translation: MKSLKLVILMLALLLVMADIRSVSSAEEEDFMFHLDQDDSIAAEAENSDQLPLLESEQPISLRGTSRFLTEAARIKVTCDKYPTVCRAKGSAGKYCCKKKCVNVRTDRLNCGACGKKCRYSEICCKGECVNPSSDRRNCGGCGKKCKKGSLCVHGMCSYS
SIO_010081: LOC100252198
subclass of: SO_0000673
so part of: LOC100252198
location: 556986..557468
location: region:556986-557468:1
so has part: feature:556986-557468:1:exon

XP_002263768.1
type: Protein
SIO_000068: ncbiprotein

position:556986:1
position: 556986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557468:1
position: 557468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556986-557468:1:exon

LOC104880472
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC104880472
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 572840..573466
location: region:572840-573466:1
so has part: feature:572840-573466:1:exon
subclass of: SO_0000010

104880472
type: Gene
SIO_000068: ncbigene

position:572840:1
position: 572840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573466:1
position: 573466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572840-573466:1:exon

LOC104880472
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104880472
product: stigma-specific STIG1-like protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010657110.2
SIO_010081: LOC104880472
subclass of: SO_0000673
so part of: LOC104880472
location: 572840..573466
location: region:572840-573466:1
so has part: feature:572840-573466:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:572840-573466:1:exon

LOC104880472
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104880472
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stigma-specific STIG1-like protein 1
translation: MKSLKLVILMLALLLVMVAIRSVSSAKEEDFMFDLDQDDSIAAEAENSDQLPLLESEQPISLRGTSRFLTEAARIKVTCDKYPTVCLAKGSAGKYCCKKKCVNVRTDRLNCGACGKKCRYSEICCKGKCVNPSSDRRNCGGCGKKCQKGSLCVHGMCSYS
SIO_010081: LOC104880472
subclass of: SO_0000673
so part of: LOC104880472
location: 572881..573363
location: region:572881-573363:1
so has part: feature:572881-573363:1:exon

XP_010655412.1
type: Protein
SIO_000068: ncbiprotein

position:572881:1
position: 572881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573363:1
position: 573363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572881-573363:1:exon

LOC104880473
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC104880473
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(581810..582295)
location: region:581810-582295:-1
so has part: feature:581810-582295:-1:exon
subclass of: SO_0000010

104880473
type: Gene
SIO_000068: ncbigene

position:581810:-1
position: 581810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582295:-1
position: 582295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581810-582295:-1:exon

LOC104880473
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104880473
product: stigma-specific STIG1-like protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_010657111.1
SIO_010081: LOC104880473
subclass of: SO_0000673
so part of: LOC104880473
location: complement(581810..582295)
location: region:581810-582295:-1
so has part: feature:581810-582295:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:581810-582295:-1:exon

LOC104880473
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104880473
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stigma-specific STIG1-like protein 1
translation: MAMKLLKLLFILSITTSIVSAASSANENNEDNSILGAAWSADENKEDSAVESHLALPEGEETTSSNGTSDFMLQNKYLICDKFPQICRRKSTPGPDCCQKKCVNLTKDPNNCGECRRKCRHNYICCSGHCVNPYVDPLNCGSCGKKCKNWEACLYGMCSYA
SIO_010081: LOC104880473
subclass of: SO_0000673
so part of: LOC104880473
location: complement(581810..582295)
location: region:581810-582295:-1
so has part: feature:581810-582295:-1:exon

XP_010655413.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:581810-582295:-1:exon

LOC100267596
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100267596
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 591839..592509
location: region:591839-592509:1
so has part: feature:591839-592509:1:exon
subclass of: SO_0000010

100267596
type: Gene
SIO_000068: ncbigene

position:591839:1
position: 591839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592509:1
position: 592509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:591839-592509:1:exon

LOC100267596
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100267596
product: stigma-specific STIG1-like protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_002263620.3
SIO_010081: LOC100267596
subclass of: SO_0000673
so part of: LOC100267596
location: 591839..592509
location: region:591839-592509:1
so has part: feature:591839-592509:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:591839-592509:1:exon

LOC100267596
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100267596
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stigma-specific STIG1-like protein 3
translation: MSTLSTIFMLTVVLALAAINSATSDEEEETFFEDPDNSSSVKAENTEPAESKKPVSLRGASRFLEQRARLTCDKYPKACESKGSSTRDNLCCNKKCVNVKVDKLNCGACGKRCKFSEICCNGRCVNPSANKNHCGGCGNSCQEGDFCAFGMCSYSYA
SIO_010081: LOC100267596
subclass of: SO_0000673
so part of: LOC100267596
location: 591870..592343
location: region:591870-592343:1
so has part: feature:591870-592343:1:exon

XP_002263656.1
type: Protein
SIO_000068: ncbiprotein

position:591870:1
position: 591870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592343:1
position: 592343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:591870-592343:1:exon

LOC100245293
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100245293
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 603860..605149
location: region:603860-605149:1
so has part: feature:603860-605149:1:exon
subclass of: SO_0000010

100245293
type: Gene
SIO_000068: ncbigene

position:603860:1
position: 603860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605149:1
position: 605149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603860-605149:1:exon

LOC100245293
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100245293
product: probable pectate lyase 16-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
transcript id: XM_002263579.3
SIO_010081: LOC100245293
subclass of: SO_0000673
so part of: LOC100245293
location: join(603860..604444,604542..604645,604725..604863,604979..605149)
location: region:603860-605149:1
so has part: feature:603860-604444:1:exon
so has part: feature:604542-604645:1:exon
so has part: feature:604725-604863:1:exon
so has part: feature:604979-605149:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:603860-604444:1:exon

position:604444:1
position: 604444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:604542-604645:1:exon

position:604542:1
position: 604542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604645:1
position: 604645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:604725-604863:1:exon

position:604725:1
position: 604725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604863:1
position: 604863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:604979-605149:1:exon

position:604979:1
position: 604979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100245293
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100245293
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable pectate lyase 16
translation: MNPIDSCWRRKANWASNRRALADCAVGFGKGAMGGKYGAMYVVTTPSDDPVNPKPGTLRYGVIQTKPLWIVFAKDMVITLKNELIMNSFKTIDGRGAKVEIAYGPCITIQGVSHVIIHGISIHDCKPGKSGLVRSTTMHVGHRLGSDGDAISIFTSSHVWIDHCYLASCTDGLIDVIHASTAITISNNYFSHHDKVMLFGHDDHFTADKVMSVTVAFNHFGTGLVQRMPRVRFGYAHLANNKYDEWEMYAIGGSANPTILSEGNHFTAPDNANTKEVTKREVKSGWKNWKWRSSKDKFVNGAYFVHLDGEAVPRFTLDPKHFLLLMVQWFLL
SIO_010081: LOC100245293
subclass of: SO_0000673
so part of: LOC100245293
location: join(603860..604444,604542..604645,604725..604863,604979..605149)
location: region:603860-605149:1
so has part: feature:603860-604444:1:exon
so has part: feature:604542-604645:1:exon
so has part: feature:604725-604863:1:exon
so has part: feature:604979-605149:1:exon

XP_002263615.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:603860-604444:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:604542-604645:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:604725-604863:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:604979-605149:1:exon

LOC100250418
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100250418
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(605497..607203)
location: region:605497-607203:-1
so has part: feature:605497-607203:-1:exon
subclass of: SO_0000010

100250418
type: Gene
SIO_000068: ncbigene

position:605497:-1
position: 605497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607203:-1
position: 607203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605497-607203:-1:exon

LOC100250418
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100250418
product: uncharacterized LOC100250418
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 99 samples with support for all annotated introns
transcript id: XM_002263548.3
SIO_010081: LOC100250418
subclass of: SO_0000673
so part of: LOC100250418
location: complement(join(605497..605865,605970..606011,606299..607203))
location: region:605497-607203:-1
so has part: feature:606299-607203:-1:exon
so has part: feature:605970-606011:-1:exon
so has part: feature:605497-605865:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:606299-607203:-1:exon

position:606299:-1
position: 606299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:605970-606011:-1:exon

position:605970:-1
position: 605970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606011:-1
position: 606011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:605497-605865:-1:exon

position:605865:-1
position: 605865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100250418
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100250418
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100250418
translation: MASLFTCRYISESLSSSFAYHLFFLILTPLIFPFLTLTAAQASLCRTSCGGIPINYPFGIDDGCGSPYYRHILVCPDSGQLELRTPSGRYPVRSLSYSDPHILVSDPFMWNCQDGDAFRPTRPFSLDTSTHFSLSPQNDYLFFNCSEDDVIVEPKPIFCERFPDRCDSSCDSASYLCRHLPECASALGGSSCCSYYPKATESLRLMLKYCASYTSVYWRSSGGNPPDDQIPEYGVRVDFDIPVTTRCLQCQDTTKGGGTCGFDTQTQDFLCLCEQGNTTTYCKDLVVRHNKRIGVIAGTATAVSFAGVVGIAAGIWYLIKLRKKAPVACGVQSNENRLF
SIO_010081: LOC100250418
subclass of: SO_0000673
so part of: LOC100250418
location: complement(join(605738..605865,605970..606011,606299..607148))
location: region:605738-607148:-1
so has part: feature:606299-607148:-1:exon
so has part: feature:605970-606011:-1:exon
so has part: feature:605738-605865:-1:exon

XP_002263584.1
type: Protein
SIO_000068: ncbiprotein

position:605738:-1
position: 605738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607148:-1
position: 607148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:606299-607148:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:605970-606011:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:605738-605865:-1:exon

LOC100255611
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100255611
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 618602..621057
location: region:618602-621057:1
so has part: feature:618602-621057:1:exon
subclass of: SO_0000010

100255611
type: Gene
SIO_000068: ncbigene

position:618602:1
position: 618602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:621057:1
position: 621057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618602-621057:1:exon

LOC100255611
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100255611
product: probable WRKY transcription factor 31
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 209 samples with support for all annotated introns
transcript id: XM_002263079.3
SIO_010081: LOC100255611
subclass of: SO_0000673
so part of: LOC100255611
location: join(618602..618985,619094..619189,619276..619446,619535..619870,619971..620084,620192..621057)
location: region:618602-621057:1
so has part: feature:618602-618985:1:exon
so has part: feature:619094-619189:1:exon
so has part: feature:619276-619446:1:exon
so has part: feature:619535-619870:1:exon
so has part: feature:619971-620084:1:exon
so has part: feature:620192-621057:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:618602-618985:1:exon

position:618985:1
position: 618985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:619094-619189:1:exon

position:619094:1
position: 619094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:619189:1
position: 619189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:619276-619446:1:exon

position:619276:1
position: 619276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:619446:1
position: 619446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:619535-619870:1:exon

position:619535:1
position: 619535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:619870:1
position: 619870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:619971-620084:1:exon

position:619971:1
position: 619971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:620084:1
position: 620084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:620192-621057:1:exon

position:620192:1
position: 620192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100255611
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100255611
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable WRKY transcription factor 31
translation: MDKGWGLTLDSIAINSFLNKRSRGILESGPMLDMPVGDERREVDFFAEKTRSVSVKKENSHVDEAAITDLDVNTGLNLLTANAGSDQSTVEDENPDRENKRAKIEVAQLQVELERMNAENQKLRGMLNQVTNNYSTLQMHLVTLMQQQSQQNRGAESLQEHGSVGGKSDEKKHEVAGAVVPRQFIDLGPTATADTDEPSQSSSEERTRDLSGSPQNHQENGKGAGREESPESETQGWVQNKASKLSPPKTIDQSAEATMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRSILITTYEGTHNHPLPPAAMAMASTTSAAANMLLSGSMSSADGLMNPNFLARTILPCSSNMATISASAPFPTVTLDLTHTPSPLQYQRPTSQFPVPFAAPAQSFPSAQTSSLPQVFSQALYNQSKFSGLQLSQDMESAHQAPPTLHQPQPASLADTVSAATAAITADPNFTAALAAAITSIIGGGAAHPNTTINSTSNATNSSNTNKISSFPTGN
SIO_010081: LOC100255611
subclass of: SO_0000673
so part of: LOC100255611
location: join(618767..618985,619094..619189,619276..619446,619535..619870,619971..620084,620192..620863)
location: region:618767-620863:1
so has part: feature:618767-618985:1:exon
so has part: feature:619094-619189:1:exon
so has part: feature:619276-619446:1:exon
so has part: feature:619535-619870:1:exon
so has part: feature:619971-620084:1:exon
so has part: feature:620192-620863:1:exon

XP_002263115.1
type: Protein
SIO_000068: ncbiprotein

position:618767:1
position: 618767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:620863:1
position: 620863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618767-618985:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:619094-619189:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:619276-619446:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:619535-619870:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:619971-620084:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:620192-620863:1:exon

LOC100233021
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100233021
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 633262..638859
location: region:633262-638859:1
so has part: feature:633262-638859:1:exon
subclass of: SO_0000010

100233021
type: Gene
SIO_000068: ncbigene

position:633262:1
position: 633262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638859:1
position: 638859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:633262-638859:1:exon

LOC100233021
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100233021
product: aspartic proteinase A1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 169 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 233 samples with support for all annotated introns
transcript id: XM_002262879.4
SIO_010081: LOC100233021
subclass of: SO_0000673
so part of: LOC100233021
location: join(633262..633365,634237..634614,634734..634794,635054..635148,635234..635346,635551..635719,635819..635858,636017..636081,637044..637157,637354..637418,637588..637744,637848..637967,638296..638384,638482..638859)
location: region:633262-638859:1
so has part: feature:633262-633365:1:exon
so has part: feature:634237-634614:1:exon
so has part: feature:634734-634794:1:exon
so has part: feature:635054-635148:1:exon
so has part: feature:635234-635346:1:exon
so has part: feature:635551-635719:1:exon
so has part: feature:635819-635858:1:exon
so has part: feature:636017-636081:1:exon
so has part: feature:637044-637157:1:exon
so has part: feature:637354-637418:1:exon
so has part: feature:637588-637744:1:exon
so has part: feature:637848-637967:1:exon
so has part: feature:638296-638384:1:exon
so has part: feature:638482-638859:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:633262-633365:1:exon

position:633365:1
position: 633365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:634237-634614:1:exon

position:634237:1
position: 634237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634614:1
position: 634614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:634734-634794:1:exon

position:634734:1
position: 634734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634794:1
position: 634794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:635054-635148:1:exon

position:635054:1
position: 635054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635148:1
position: 635148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:635234-635346:1:exon

position:635234:1
position: 635234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635346:1
position: 635346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:635551-635719:1:exon

position:635551:1
position: 635551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635719:1
position: 635719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:635819-635858:1:exon

position:635819:1
position: 635819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635858:1
position: 635858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:636017-636081:1:exon

position:636017:1
position: 636017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636081:1
position: 636081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:637044-637157:1:exon

position:637044:1
position: 637044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:637157:1
position: 637157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:637354-637418:1:exon

position:637354:1
position: 637354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:637418:1
position: 637418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:637588-637744:1:exon

position:637588:1
position: 637588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:637744:1
position: 637744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:637848-637967:1:exon

position:637848:1
position: 637848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:637967:1
position: 637967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:638296-638384:1:exon

position:638296:1
position: 638296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638384:1
position: 638384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:638482-638859:1:exon

position:638482:1
position: 638482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100233021
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100233021
product: aspartic proteinase A1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 184 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 255 samples with support for all annotated introns
transcript id: XM_003632893.3
SIO_010081: LOC100233021
subclass of: SO_0000673
so part of: LOC100233021
location: join(633335..633466,634237..634614,634734..634794,635054..635148,635234..635346,635551..635719,635819..635858,636017..636081,637044..637157,637354..637418,637588..637744,637848..637967,638296..638384,638482..638859)
location: region:633335-638859:1
so has part: feature:633335-633466:1:exon
so has part: feature:634237-634614:1:exon
so has part: feature:634734-634794:1:exon
so has part: feature:635054-635148:1:exon
so has part: feature:635234-635346:1:exon
so has part: feature:635551-635719:1:exon
so has part: feature:635819-635858:1:exon
so has part: feature:636017-636081:1:exon
so has part: feature:637044-637157:1:exon
so has part: feature:637354-637418:1:exon
so has part: feature:637588-637744:1:exon
so has part: feature:637848-637967:1:exon
so has part: feature:638296-638384:1:exon
so has part: feature:638482-638859:1:exon

position:633335:1
position: 633335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:633335-633466:1:exon

position:633466:1
position: 633466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:634237-634614:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:634734-634794:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635054-635148:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:635234-635346:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:635551-635719:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:635819-635858:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636017-636081:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:637044-637157:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:637354-637418:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:637588-637744:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:637848-637967:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:638296-638384:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:638482-638859:1:exon

LOC100233021
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100233021
product: aspartic proteinase A1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 166 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 160 samples with support for all annotated introns
transcript id: XM_010657074.2
SIO_010081: LOC100233021
subclass of: SO_0000673
so part of: LOC100233021
location: join(633560..633778,634237..634614,634734..634794,635054..635148,635234..635346,635551..635719,635819..635858,636017..636081,637044..637157,637354..637418,637588..637744,637848..637967,638296..638384,638482..638859)
location: region:633560-638859:1
so has part: feature:633560-633778:1:exon
so has part: feature:634237-634614:1:exon
so has part: feature:634734-634794:1:exon
so has part: feature:635054-635148:1:exon
so has part: feature:635234-635346:1:exon
so has part: feature:635551-635719:1:exon
so has part: feature:635819-635858:1:exon
so has part: feature:636017-636081:1:exon
so has part: feature:637044-637157:1:exon
so has part: feature:637354-637418:1:exon
so has part: feature:637588-637744:1:exon
so has part: feature:637848-637967:1:exon
so has part: feature:638296-638384:1:exon
so has part: feature:638482-638859:1:exon

position:633560:1
position: 633560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:633560-633778:1:exon

position:633778:1
position: 633778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:634237-634614:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:634734-634794:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635054-635148:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:635234-635346:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:635551-635719:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:635819-635858:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636017-636081:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:637044-637157:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:637354-637418:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:637588-637744:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:637848-637967:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:638296-638384:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:638482-638859:1:exon

LOC100233021
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100233021
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aspartic proteinase A1
translation: MEAKLKAVLVSLFLSSLLFSLVSSATTDGLFRIGLKKMKLDQNDQLAARLESKEGESLRASIRKYFRHGNLGDSQDTDIVGLKNYMDAQYFGEIGIGTPPQTFTVIFDTGSSNLWVPSSKCYFSVPCYFHSKYKSSQSSTYRKNGKSADIHYGTGAISGFFSEDNVKVGDLVVKNQEFIEATREPSVTFLVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLVKEPVFSFWLNRKTDDDEGGELVFGGVDPDHFKGEHTYVPVTQKGYWQFDMGEVLIDGETTGYCAGGCAAIADSGTSLLAGPTAVVAMINHAIGATGVVSQECKTVVAQYGETIMDLLLSEASPQKICSQIGLCTFDGTRGVGMGIESVVDEKNGDKSSGVHDAGCSACEMAVVWMQSQLRQNQTKERILEYVNELCDRLPSPMGESAVDCLQLSSMPNVSLTIGGKVFDLSANEYVLKVGEGAAAQCISGFIAMDVPPPRGPLWILGDVFMGRYHTVFDYGNMRVGFAEAA
SIO_010081: LOC100233021
subclass of: SO_0000673
so part of: LOC100233021
location: join(634243..634614,634734..634794,635054..635148,635234..635346,635551..635719,635819..635858,636017..636081,637044..637157,637354..637418,637588..637744,637848..637967,638296..638384,638482..638566)
location: region:634243-638566:1
so has part: feature:634243-634614:1:exon
so has part: feature:634734-634794:1:exon
so has part: feature:635054-635148:1:exon
so has part: feature:635234-635346:1:exon
so has part: feature:635551-635719:1:exon
so has part: feature:635819-635858:1:exon
so has part: feature:636017-636081:1:exon
so has part: feature:637044-637157:1:exon
so has part: feature:637354-637418:1:exon
so has part: feature:637588-637744:1:exon
so has part: feature:637848-637967:1:exon
so has part: feature:638296-638384:1:exon
so has part: feature:638482-638566:1:exon

XP_003632941.1
type: Protein
SIO_000068: ncbiprotein

position:634243:1
position: 634243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638566:1
position: 638566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:634243-634614:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:634734-634794:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:635054-635148:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635234-635346:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:635551-635719:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:635819-635858:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:636017-636081:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637044-637157:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:637354-637418:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:637588-637744:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:637848-637967:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:638296-638384:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:638482-638566:1:exon

LOC100233021
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100233021
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aspartic proteinase A1
translation: MEAKLKAVLVSLFLSSLLFSLVSSATTDGLFRIGLKKMKLDQNDQLAARLESKEGESLRASIRKYFRHGNLGDSQDTDIVGLKNYMDAQYFGEIGIGTPPQTFTVIFDTGSSNLWVPSSKCYFSVPCYFHSKYKSSQSSTYRKNGKSADIHYGTGAISGFFSEDNVKVGDLVVKNQEFIEATREPSVTFLVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLVKEPVFSFWLNRKTDDDEGGELVFGGVDPDHFKGEHTYVPVTQKGYWQFDMGEVLIDGETTGYCAGGCAAIADSGTSLLAGPTAVVAMINHAIGATGVVSQECKTVVAQYGETIMDLLLSEASPQKICSQIGLCTFDGTRGVGMGIESVVDEKNGDKSSGVHDAGCSACEMAVVWMQSQLRQNQTKERILEYVNELCDRLPSPMGESAVDCLQLSSMPNVSLTIGGKVFDLSANEYVLKVGEGAAAQCISGFIAMDVPPPRGPLWILGDVFMGRYHTVFDYGNMRVGFAEAA
SIO_010081: LOC100233021
subclass of: SO_0000673
so part of: LOC100233021
location: join(634243..634614,634734..634794,635054..635148,635234..635346,635551..635719,635819..635858,636017..636081,637044..637157,637354..637418,637588..637744,637848..637967,638296..638384,638482..638566)
location: region:634243-638566:1
so has part: feature:634243-634614:1:exon
so has part: feature:634734-634794:1:exon
so has part: feature:635054-635148:1:exon
so has part: feature:635234-635346:1:exon
so has part: feature:635551-635719:1:exon
so has part: feature:635819-635858:1:exon
so has part: feature:636017-636081:1:exon
so has part: feature:637044-637157:1:exon
so has part: feature:637354-637418:1:exon
so has part: feature:637588-637744:1:exon
so has part: feature:637848-637967:1:exon
so has part: feature:638296-638384:1:exon
so has part: feature:638482-638566:1:exon

XP_002262915.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:634243-634614:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:634734-634794:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:635054-635148:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635234-635346:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:635551-635719:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:635819-635858:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:636017-636081:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637044-637157:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:637354-637418:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:637588-637744:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:637848-637967:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:638296-638384:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:638482-638566:1:exon

LOC100233021
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100233021
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aspartic proteinase A1
translation: MEAKLKAVLVSLFLSSLLFSLVSSATTDGLFRIGLKKMKLDQNDQLAARLESKEGESLRASIRKYFRHGNLGDSQDTDIVGLKNYMDAQYFGEIGIGTPPQTFTVIFDTGSSNLWVPSSKCYFSVPCYFHSKYKSSQSSTYRKNGKSADIHYGTGAISGFFSEDNVKVGDLVVKNQEFIEATREPSVTFLVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLVKEPVFSFWLNRKTDDDEGGELVFGGVDPDHFKGEHTYVPVTQKGYWQFDMGEVLIDGETTGYCAGGCAAIADSGTSLLAGPTAVVAMINHAIGATGVVSQECKTVVAQYGETIMDLLLSEASPQKICSQIGLCTFDGTRGVGMGIESVVDEKNGDKSSGVHDAGCSACEMAVVWMQSQLRQNQTKERILEYVNELCDRLPSPMGESAVDCLQLSSMPNVSLTIGGKVFDLSANEYVLKVGEGAAAQCISGFIAMDVPPPRGPLWILGDVFMGRYHTVFDYGNMRVGFAEAA
SIO_010081: LOC100233021
subclass of: SO_0000673
so part of: LOC100233021
location: join(634243..634614,634734..634794,635054..635148,635234..635346,635551..635719,635819..635858,636017..636081,637044..637157,637354..637418,637588..637744,637848..637967,638296..638384,638482..638566)
location: region:634243-638566:1
so has part: feature:634243-634614:1:exon
so has part: feature:634734-634794:1:exon
so has part: feature:635054-635148:1:exon
so has part: feature:635234-635346:1:exon
so has part: feature:635551-635719:1:exon
so has part: feature:635819-635858:1:exon
so has part: feature:636017-636081:1:exon
so has part: feature:637044-637157:1:exon
so has part: feature:637354-637418:1:exon
so has part: feature:637588-637744:1:exon
so has part: feature:637848-637967:1:exon
so has part: feature:638296-638384:1:exon
so has part: feature:638482-638566:1:exon

XP_010655376.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:634243-634614:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:634734-634794:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:635054-635148:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635234-635346:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:635551-635719:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:635819-635858:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:636017-636081:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637044-637157:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:637354-637418:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:637588-637744:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:637848-637967:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:638296-638384:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:638482-638566:1:exon

LOC100853452
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100853452
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 641759..643292
location: region:641759-643292:1
so has part: feature:641759-643292:1:exon
subclass of: SO_0000010

100853452
type: Gene
SIO_000068: ncbigene

position:641759:1
position: 641759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643292:1
position: 643292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641759-643292:1:exon

LOC100853452
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100853452
product: mitogen-activated protein kinase kinase kinase A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010657112.2
SIO_010081: LOC100853452
subclass of: SO_0000673
so part of: LOC100853452
location: 641759..643292
location: region:641759-643292:1
so has part: feature:641759-643292:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:641759-643292:1:exon

LOC100853452
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100853452
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase kinase kinase A-like
translation: MDWTRGCTLGRGSSATVSIATSHLSGDIFAVKSTELSQSKLLKREQRILSTVRSAHVIEYRGWNVTCENGKQMYNLCMEYAAGGTLKQRGSLGEAAIRANTRAILQGLQYLHSNCIVHCDIKSENILITGDGLKIGDLGCARLADDFSDSVCGTPAFMAPEVARGEEQGFAADVWALGCTIIEMATGRAPWTDVSDPVSAVYRIGFSGDVPEIPGWVSEDAKDFLGKCLVRDPVQRWSVGELLGHPFVNEACVFSKEVYGSSSSSPTSVLDQRFWSSSIEELYPFHKKSWNSPRERIHFLANSNSNSGLPNWGWDENWVTVRSGSMEEPEVVSEAPTATMAWAGEDPGMVGFREPTPTAAMDSCNSCNLSRLKCKCMNYVLCGNLNFDFVANFNDSSSRLVHLYHNLTKFGSKVDLAISNGLSCVSVT
SIO_010081: LOC100853452
subclass of: SO_0000673
so part of: LOC100853452
location: 641937..643223
location: region:641937-643223:1
so has part: feature:641937-643223:1:exon

XP_010655414.1
type: Protein
SIO_000068: ncbiprotein

position:641937:1
position: 641937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643223:1
position: 643223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641937-643223:1:exon

LOC100853501
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100853501
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 644835..646488
location: region:644835-646488:1
so has part: feature:644835-646488:1:exon
subclass of: SO_0000010

100853501
type: Gene
SIO_000068: ncbigene

position:644835:1
position: 644835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646488:1
position: 646488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:644835-646488:1:exon

LOC100853501
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100853501
product: mitogen-activated protein kinase kinase kinase A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010657113.2
SIO_010081: LOC100853501
subclass of: SO_0000673
so part of: LOC100853501
location: 644835..646488
location: region:644835-646488:1
so has part: feature:644835-646488:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:644835-646488:1:exon

LOC100853501
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100853501
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase kinase kinase A-like
translation: MDWTRGCTLGRGSSATVSIATSHLSGDIFAVKSTELSQSKLLKREQRILSTVRSAHVIEYRGWNVTCENGKQMYNLCMEYAAGGTLKQRGSLGEAAIRANTRAILQGLQYLHSNCIVHCDIKSENILITGEGLKIGDLGCARLADDFSDSVCGTPAFMAPEVARGEEQGFAADVWALGCTIIEMATGRAPWTDVSDPVSAVYRIGFSGDVPEIPGWVSEEAKDFLGKCLVRDPVKRWSVGELLGHPFVNEACVFSKEVYGSSSSSPTSVLDQRFWSSSIEELYPFHKKSWNSPRERIQFLANSNSNSGLPNWGWDENWVTVRSGSMEELEVVSEAPTATMAWAGEDPGMVGFREPTPTAAMDSCNSCNLSRLKCKCMNYVFCGNLNFDFVANFNDSSSRLVPLYHNLTKFGSKVDLAISNGLSCLSVT
SIO_010081: LOC100853501
subclass of: SO_0000673
so part of: LOC100853501
location: 645142..646428
location: region:645142-646428:1
so has part: feature:645142-646428:1:exon

XP_010655415.1
type: Protein
SIO_000068: ncbiprotein

position:645142:1
position: 645142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646428:1
position: 646428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:645142-646428:1:exon

LOC100260675
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100260675
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 647257..663267
location: region:647257-663267:1
so has part: feature:647257-663267:1:exon
subclass of: SO_0000010

100260675
type: Gene
SIO_000068: ncbigene

position:647257:1
position: 647257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663267:1
position: 663267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:647257-663267:1:exon

LOC100260675
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100260675
product: S-type anion channel SLAH1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_019222601.1
SIO_010081: LOC100260675
subclass of: SO_0000673
so part of: LOC100260675
location: join(647257..648364,662846..663267)
location: region:647257-663267:1
so has part: feature:647257-648364:1:exon
so has part: feature:662846-663267:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:647257-648364:1:exon

position:648364:1
position: 648364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:662846-663267:1:exon

position:662846:1
position: 662846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100260675
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100260675
product: S-type anion channel SLAH1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_002263484.4
SIO_010081: LOC100260675
subclass of: SO_0000673
so part of: LOC100260675
location: join(647257..648364,648588..649009)
location: region:647257-649009:1
so has part: feature:647257-648364:1:exon
so has part: feature:648588-649009:1:exon

position:649009:1
position: 649009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:647257-648364:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:648588-649009:1:exon

position:648588:1
position: 648588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100260675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100260675
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: S-type anion channel SLAH4 isoform X2
translation: MENRGAQPPIELMVEATSNSTSQEYHSHESIVSKPPLESFLTRLHAGYFRISLSLGSQALLWKTLSEAKSDLQPLRHVSQMLPLLAFLLLWYLSFFTLISLSFLYILRCFFHFQMVKAEFLHHVGVNYLFAPWISWLLLLQSAPLVVPNTLSYLVLWWVFAIPVLALDIKIYGQWFTTEKRFFSMVANPTSQISVIGNLAGAQAAALMGWKESAVCMFTLGMVHYLVVFVTLYQRLSGGDRLPVMLRPVFFLFFAAPSMASLAWKSISGTFDTTSKMLFFLSLFLFTSLACRPALFKKSMRKFNVAWWAYSFPLTFLALASAEYAQKVEGEIAPVLMLMLIAFSVLVCLSLMLFTALNTKALLLGNDPILKFRKSQNKEGLTMVYRNGG
SIO_010081: LOC100260675
subclass of: SO_0000673
so part of: LOC100260675
location: join(647498..648364,662846..663148)
location: region:647498-663148:1
so has part: feature:647498-648364:1:exon
so has part: feature:662846-663148:1:exon

XP_019078146.1
type: Protein
SIO_000068: ncbiprotein

position:647498:1
position: 647498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663148:1
position: 663148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:647498-648364:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:662846-663148:1:exon

LOC100260675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100260675
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: S-type anion channel SLAH4 isoform X1
translation: MENRGAQPPIELMVEATSNSTSQEYHSHESIVSKPPLESFLTRLHAGYFRISLSLGSQALLWKTLSEAKSDLQPLRHVSQMLPLLAFLLLWYLSFFTLISLSFLYILRCFFHFQMVKAEFLHHVGVNYLFAPWISWLLLLQSAPLVVPNTLSYLVLWWVFAIPVLALDIKIYGQWFTTEKRFFSMVANPTSQISVIGNLAGAQAAALMGWKESAVCMFTLGMVHYLVVFVTLYQRLSGGDRLPVMLRPVFFLFFAAPSMASLAWKSISGTFDTTSKMLFFLSLFLFTSLACRPTLFKKSMRKFNVAWWAYSFPLTFLALASAEYAQKVEGEIAPVLMLMLIAFSVLVCLSLMLFTALNTKALLLGNDPILKFCKSQNKEGLTMVYRNGG
SIO_010081: LOC100260675
subclass of: SO_0000673
so part of: LOC100260675
location: join(647498..648364,648588..648890)
location: region:647498-648890:1
so has part: feature:647498-648364:1:exon
so has part: feature:648588-648890:1:exon

XP_002263520.2
type: Protein
SIO_000068: ncbiprotein

position:648890:1
position: 648890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:647498-648364:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:648588-648890:1:exon

LOC100260675
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100260675
product: S-type anion channel SLAH1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_019222602.1
SIO_010081: LOC100260675
subclass of: SO_0000673
so part of: LOC100260675
location: join(647668..647769,647840..648364,648588..649009)
location: region:647668-649009:1
so has part: feature:647668-647769:1:exon
so has part: feature:647840-648364:1:exon
so has part: feature:648588-649009:1:exon

position:647668:1
position: 647668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:647668-647769:1:exon

position:647769:1
position: 647769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:647840-648364:1:exon

position:647840:1
position: 647840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:648588-649009:1:exon

LOC100260675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100260675
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: S-type anion channel SLAH1 isoform X3
translation: MVKAEFLHHVGVNYLFAPWISWLLLLQSAPLVVPNTLSYLVLWWVFAIPVLALDIKIYGQWFTTEKRFFSMVANPTSQISVIGNLAGAQAAALMGWKESAVCMFTLGMVHYLVVFVTLYQRLSGGDRLPVMLRPVFFLFFAAPSMASLAWKSISGTFDTTSKMLFFLSLFLFTSLACRPTLFKKSMRKFNVAWWAYSFPLTFLALASAEYAQKVEGEIAPVLMLMLIAFSVLVCLSLMLFTALNTKALLLGNDPILKFCKSQNKEGLTMVYRNGG
SIO_010081: LOC100260675
subclass of: SO_0000673
so part of: LOC100260675
location: join(647840..648364,648588..648890)
location: region:647840-648890:1
so has part: feature:647840-648364:1:exon
so has part: feature:648588-648890:1:exon

XP_019078147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:647840-648364:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:648588-648890:1:exon

LOC100265893
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100265893
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(649205..651947)
location: region:649205-651947:-1
so has part: feature:649205-651947:-1:exon
subclass of: SO_0000010

100265893
type: Gene
SIO_000068: ncbigene

position:649205:-1
position: 649205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:651947:-1
position: 651947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:649205-651947:-1:exon

LOC100265893
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100265893
product: B-cell receptor-associated protein 31
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 253 samples with support for all annotated introns
transcript id: XM_002262771.4
SIO_010081: LOC100265893
subclass of: SO_0000673
so part of: LOC100265893
location: complement(join(649205..649764,651505..651947))
location: region:649205-651947:-1
so has part: feature:651505-651947:-1:exon
so has part: feature:649205-649764:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:651505-651947:-1:exon

position:651505:-1
position: 651505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:649205-649764:-1:exon

position:649764:-1
position: 649764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100265893
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100265893
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: B-cell receptor-associated protein 31
translation: MIQLLFTVIFAEMAMIMVLLFKTPLRKLVIMGLDRVKRGRGPIMVKTVAATVLVVLISSVYSMMKIRKRGIDDDVVNPTDQVLMAKHLLETSLMGFTLFLALMIDRLHHYIRELRLRRKSMEAIKKQNRGFEDGKTGGSAEIKAMEEEMAALGAKLKQLESEIETKTKEAKAAETNAVALRKQSEGFLLEYDRLLEENQNLRNQLQSLDRRLSHSGSKKNT
SIO_010081: LOC100265893
subclass of: SO_0000673
so part of: LOC100265893
location: complement(join(649382..649764,651505..651787))
location: region:649382-651787:-1
so has part: feature:651505-651787:-1:exon
so has part: feature:649382-649764:-1:exon

XP_002262807.3
type: Protein
SIO_000068: ncbiprotein

position:649382:-1
position: 649382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:651787:-1
position: 651787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:651505-651787:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:649382-649764:-1:exon

LOC109123315
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC109123315
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(655367..656808)
location: region:655367-656808:-1
so has part: feature:655367-656808:-1:exon
subclass of: SO_0000010

109123315
type: Gene
SIO_000068: ncbigene

position:655367:-1
position: 655367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656808:-1
position: 656808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:655367-656808:-1:exon

LOC109123315
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC109123315
product: probable F-box protein At4g22030
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019222600.1
SIO_010081: LOC109123315
subclass of: SO_0000673
so part of: LOC109123315
location: complement(655367..656808)
location: region:655367-656808:-1
so has part: feature:655367-656808:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:655367-656808:-1:exon

LOC109123315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC109123315
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable F-box protein At4g22030
translation: MVSLQFSSAVITSVAYSSSRCRRGMIRATINMPKLQPGRLSLNLPAGDLVLQEVLDMGVGLTAATTSNLEKKYEPSTNGIFPSVSNVSDPSVIAKLHAIMEAVADRVEMHKNIGEQRDNWNHLLLTSINAITLTAATMAGIAATSVGGPLVALKLSSTLMYLAATGMLVVMNKIQPSQLVEEQRNAARLFKQLHGQIQRTLSCGTPTSTDVEEVMEKVLSLDKAFPLPLLGAMLDKFPKVVEPAVWWPEHRQRQERHSGRTDGNGWSVELEEEMRVVVGVLKRKDTEDYLRLGKIALKVNRMLAISGPLLTGLAACGTAFVGSSHGPWPATLGVVAGAMASVVNTMEHGGQVGMVFEMYRSNAGFFRMMEESIESNLNERDVGRRENGELFETKVALQLGRSLSGLKGLAASSYSSSKKGEAIEEFASKLF
SIO_010081: LOC109123315
subclass of: SO_0000673
so part of: LOC109123315
location: complement(655491..656786)
location: region:655491-656786:-1
so has part: feature:655491-656786:-1:exon

XP_019078145.1
type: Protein
SIO_000068: ncbiprotein

position:655491:-1
position: 655491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656786:-1
position: 656786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:655491-656786:-1:exon

LOC100854630
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100854630
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(663356..665422)
location: region:663356-665422:-1
so has part: feature:663356-665422:-1:exon

100854630
type: Gene
SIO_000068: ncbigene

position:663356:-1
position: 663356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665422:-1
position: 665422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:663356-665422:-1:exon

LOC100854630
type: Exon
subclass of: SO_0000147
RO_0002162: 29760
gene: LOC100854630
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC100854630
subclass of: SO_0000673
so part of: LOC100854630
location: complement(663356..664161)
location: region:663356-664161:-1
so has part: feature:663356-664161:-1:exon

position:664161:-1
position: 664161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:663356-664161:-1:exon

LOC100854630
type: Exon
subclass of: SO_0000147
RO_0002162: 29760
gene: LOC100854630
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC100854630
subclass of: SO_0000673
so part of: LOC100854630
location: complement(665110..665422)
location: region:665110-665422:-1
so has part: feature:665110-665422:-1:exon

position:665110:-1
position: 665110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:665110-665422:-1:exon

LOC100265886
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100265886
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(668769..670294)
location: region:668769-670294:-1
so has part: feature:668769-670294:-1:exon
subclass of: SO_0000010

100265886
type: Gene
SIO_000068: ncbigene

position:668769:-1
position: 668769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670294:-1
position: 670294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:668769-670294:-1:exon

LOC100265886
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100265886
product: probable F-box protein At4g22030
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_002263446.4
SIO_010081: LOC100265886
subclass of: SO_0000673
so part of: LOC100265886
location: complement(668769..670294)
location: region:668769-670294:-1
so has part: feature:668769-670294:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:668769-670294:-1:exon

LOC100265886
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100265886
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable F-box protein At4g22030
translation: MVSLQFSSAVITSVAYSSSRCRRGMIRATINMPKLQPGRLSLNLPARDLVLQEVLDMGVGLTAATTSNLEKKYEPSTNGIFPSVSDVSDPSVIAKLHAIMEAVADRVEMHKNIGEQRDNWNHLLLTSINAITLTAATMAGIAATSVGGPLVALKLSSTLMYLAATGMLVVMNKIQPSQLVEEQRNAARLFKQLHGQIQRTLSCGTPTSTDVEEVMEKVLSLDKAFPLPLLGAMLDKFPKTVEPAVWWPEHRRRQDRQSGRTDGNGWSVELEEEMREVVGVLKRKDTEDYLRLGKIALKVNRMLAISGPLLTGLAACGTAFVGSSHGPWAATLGVVAGAMASVVNTMEHGGQMGMVFEMYRSNAGFFRMMEETIESNLNERDVGRRENGELFETKVALQLGRSLSGLKDLAASSYSSSKKGEAIEEFASKLF
SIO_010081: LOC100265886
subclass of: SO_0000673
so part of: LOC100265886
location: complement(668891..670186)
location: region:668891-670186:-1
so has part: feature:668891-670186:-1:exon

XP_002263482.2
type: Protein
SIO_000068: ncbiprotein

position:668891:-1
position: 668891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670186:-1
position: 670186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:668891-670186:-1:exon

LOC100853684
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100853684
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(673968..675257)
location: region:673968-675257:-1
so has part: feature:673968-675257:-1:exon
subclass of: SO_0000010

100853684
type: Gene
SIO_000068: ncbigene

position:673968:-1
position: 673968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:675257:-1
position: 675257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:673968-675257:-1:exon

LOC100853684
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100853684
product: probable F-box protein At4g22030
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_003632902.3
SIO_010081: LOC100853684
subclass of: SO_0000673
so part of: LOC100853684
location: complement(673968..675257)
location: region:673968-675257:-1
so has part: feature:673968-675257:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:673968-675257:-1:exon

LOC100853684
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100853684
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable F-box protein At4g22030
translation: MASLQSSGVIGSLPHSLSCCRRGMIRATINMPKLRTGGLSLKLPARDLVQEVLDMGVGLTAATTSHVEKKYESRPNTTLPSVSNVSDPMVIAKLHEIMEAVADRVEMHKNIGEQRDNWNHLLLTSINAITLTAATMAGIAATSVGGPLVALKLSSTLMYLAATGMLVVMNKIQPSQLVEEQRNAARLFKQLHGQIQRTLSCGTPTSNDVEEAMEKVLALDKAFPLPLLGAMLDKFPKTVEPAVWWPQHRQRQERHSGRTDGNGWSVELEEEMREVVGVLKRKDTEDYLRLGKIALKVNKILAISGPLLTGLSACGTAFVGSSHGPWAATLGVVAGAMASVVNTMEHGWQVGMVFEMYRGNAGFFRLMEESIESNLNERDVGRRENGELFEMKVALQLGRSLSGLKDLAASSYSSSKKGEAIEEFASKLF
SIO_010081: LOC100853684
subclass of: SO_0000673
so part of: LOC100853684
location: complement(673968..675257)
location: region:673968-675257:-1
so has part: feature:673968-675257:-1:exon

XP_003632950.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:673968-675257:-1:exon

LOC100853721
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100853721
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(677501..678796)
location: region:677501-678796:-1
so has part: feature:677501-678796:-1:exon
subclass of: SO_0000010

100853721
type: Gene
SIO_000068: ncbigene

position:677501:-1
position: 677501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678796:-1
position: 678796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:677501-678796:-1:exon

LOC100853721
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100853721
product: probable F-box protein At4g22030
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_003632903.1
SIO_010081: LOC100853721
subclass of: SO_0000673
so part of: LOC100853721
location: complement(677501..678796)
location: region:677501-678796:-1
so has part: feature:677501-678796:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:677501-678796:-1:exon

LOC100853721
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100853721
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable F-box protein At4g22030
translation: MVSLQFSSAVITSVAYSSSRCRRGMIRATINMPKLQPGRLSLNLPARDLVLQEVLDMGVGLTAATTSNLEKKYELSTNGTFPSVSNVSDPLVIAKLHAMMEAVADRVEMHKNIGEQRDNWNHLLLTSINAITLTAATMAGIAATSVGGPLVALKLSSTLMYLAATGMLVVMNKIQPSQLVEEQRNAARLFKQLHGQIQRTLSCGTPTSTDVEEVMEKVLSLDKAFPLPLLGAMLDKFPKTVEPAVWWPEHRQRQDRQSGRTDGNGWSVELEEEMREVVGVLKRKDTEDYLRLGKIALKVNRMLAISGPLLTGLAACGTAFVGSSHGPWAATLGVVAGAMASVVNTMEHGGQVGMVFEMYRSNAGFFRMMEESIESNLNERDVGRRENGELFETKVALQLGRSLSGLKSLAASSCSSSKKGEAIEEFASKLF
SIO_010081: LOC100853721
subclass of: SO_0000673
so part of: LOC100853721
location: complement(677501..678796)
location: region:677501-678796:-1
so has part: feature:677501-678796:-1:exon

XP_003632951.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:677501-678796:-1:exon

LOC100248699
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100248699
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(683267..683968)
location: region:683267-683968:-1
so has part: feature:683267-683968:-1:exon
subclass of: SO_0000010

100248699
type: Gene
SIO_000068: ncbigene

position:683267:-1
position: 683267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683968:-1
position: 683968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:683267-683968:-1:exon

LOC100248699
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100248699
product: probable F-box protein At4g22030
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_019222513.1
SIO_010081: LOC100248699
subclass of: SO_0000673
so part of: LOC100248699
location: complement(683267..683968)
location: region:683267-683968:-1
so has part: feature:683267-683968:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:683267-683968:-1:exon

LOC100248699
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100248699
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable F-box protein At4g22030
translation: MYLAATGMLVVMNKIQPSQLVEEQRNAARLFKQLHGQIQRTLSCGTPTSNDVEEAMEKVLALDKAFPLPLLGAMLDKFPETVEPAVWWPQHRQRQERHSGRTDGNGWSVELEEEMREVVGVLKRKDTEDYLRLGKIALKVNKILAISGPLLTGLAACGTAFVGSSHGPWAATLGVVAGAMASVVNTMEHGGQVGMVFEMYRGNAGFFRLMEESIESNLNERDVGRRENGELFE
SIO_010081: LOC100248699
subclass of: SO_0000673
so part of: LOC100248699
location: complement(683267..683968)
location: region:683267-683968:-1
so has part: feature:683267-683968:-1:exon

XP_019078058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:683267-683968:-1:exon

LOC100253799
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100253799
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(687605..699658)
location: region:687605-699658:-1
so has part: feature:687605-699658:-1:exon
subclass of: SO_0000010

100253799
type: Gene
SIO_000068: ncbigene

position:687605:-1
position: 687605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:699658:-1
position: 699658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:687605-699658:-1:exon

LOC100253799
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100253799
product: probable F-box protein At4g22030
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 77% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_002263334.2
SIO_010081: LOC100253799
subclass of: SO_0000673
so part of: LOC100253799
location: complement(join(687605..688710,699415..699658))
location: region:687605-699658:-1
so has part: feature:699415-699658:-1:exon
so has part: feature:687605-688710:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:699415-699658:-1:exon

position:699415:-1
position: 699415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:687605-688710:-1:exon

position:688710:-1
position: 688710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100253799
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100253799
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable F-box protein At4g22030
translation: MTIKTDAFKVIKRAIGKPSTLGMAEFPGAIEAELEVVALAMMFGRGDAGGVGERRYRGRHAFLMIPRVMGVPLSVKVAAKKATTSNLEKKYELSTNGTFPSVSNVSDPLVIAKLHAIMEAVADRVETHKNIGEQRDNWNHLLLTSINAITLTAATMAGIAATSVGGPLVALKLSSTLMYLAATGMLVVMNKIQPSQLVEEQRNAARLFKQLHGQIQRTLSCGTPTSTDVEEVMEKVLSLDKAFPLPLLGAMLDKFPKTVEPAVWWPEHRQRQERQSGRTDGNGWRVELEEEMREVVGVLKRKDTEDYLRLGKIALKVNRMLAISGPLLTGLAACGTAFVGSSHGPWAATLGVVAGAMASVVNTMEHGGQVGMVFEMYRSNAGFFRLMEESIESNLNERDVGRRENGELFETKVALQLGRSLSGLKGLAASSYSSSKKGEAIEEFASKLF
SIO_010081: LOC100253799
subclass of: SO_0000673
so part of: LOC100253799
location: complement(join(687605..688710,699415..699658))
location: region:687605-699658:-1
so has part: feature:699415-699658:-1:exon
so has part: feature:687605-688710:-1:exon

XP_002263370.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:699415-699658:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:687605-688710:-1:exon

LOC100264114
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100264114
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(704830..706125)
location: region:704830-706125:-1
so has part: feature:704830-706125:-1:exon
subclass of: SO_0000010

100264114
type: Gene
SIO_000068: ncbigene

position:704830:-1
position: 704830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:706125:-1
position: 706125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:704830-706125:-1:exon

LOC100264114
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100264114
product: probable F-box protein At4g22030
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_002263279.2
SIO_010081: LOC100264114
subclass of: SO_0000673
so part of: LOC100264114
location: complement(704830..706125)
location: region:704830-706125:-1
so has part: feature:704830-706125:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:704830-706125:-1:exon

LOC100264114
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100264114
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable F-box protein At4g22030
translation: MVSLQFSSAVITSVAYSSSRCRRGMVRATINMPKLQPGRLSLNLPARNLVLQEVLDMGVGLTAATTSNLEKKYELSTNGTFPSVSNVSDPLVIAKLHAIMEAVADRVEMHKNIGEQRDNWNHLLLTSINAITLTAATMAGIAATSVGGPLVALKLSSTLMYLAATGMLVVMNKIQPSQLVEEQRNAARLFKQLHGQIQRTLSCGTPTSTDVEEVMEKVLSLDKAFPLPLLGAMLDKFPKTVEPAVWWPEHRQRQDRQSGRTDGNGWSVELEEEMREVVGVLKRKDTEDYLRLGKIALKVNRMLAISGPLLTGLAACGTAFVGSSHGPWAATLGVVAGAMASVVNTMEHGVQVGMVFEMYRSNAGFFRMMEETIESNLNERDVGRRENGELFETKVALQLGRSLSGLKGLAASSYSSSKKGEAIEEFASKLF
SIO_010081: LOC100264114
subclass of: SO_0000673
so part of: LOC100264114
location: complement(704830..706125)
location: region:704830-706125:-1
so has part: feature:704830-706125:-1:exon

XP_002263315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:704830-706125:-1:exon

LOC100241831
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100241831
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(709265..710781)
location: region:709265-710781:-1
so has part: feature:709265-710781:-1:exon
subclass of: SO_0000010

100241831
type: Gene
SIO_000068: ncbigene

position:709265:-1
position: 709265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710781:-1
position: 710781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:709265-710781:-1:exon

LOC100241831
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100241831
product: probable F-box protein At4g22030
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_003632904.3
SIO_010081: LOC100241831
subclass of: SO_0000673
so part of: LOC100241831
location: complement(709265..710781)
location: region:709265-710781:-1
so has part: feature:709265-710781:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:709265-710781:-1:exon

LOC100241831
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100241831
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable F-box protein At4g22030
translation: MASLQSSGVIGSLPHSLSCCRRGMIRATINMPKLRTGGLSLKLPARDLVQEVLDMGVGLTAATTSHVEKKYESRPNTTLPRVSNVSDPMVIAKLHAMMEAVADRVEMHKNIGEQRDNWNHLLLTSINAITLTAATMAGIAATSVGGPLVALKLSSTLMYLAATGMLVVMNKIQPSQLVEEQRNAARLFKQLHGQIQRTLSCGTPTSNDVEEAMEEVLALDKAFPLPLLGAMLDKFPETVEPAVWWPEHRQRQERHSGRTDGNGWSVELEEEMREVVGVLKRKDTEDYLRLGKIALKVNKILAISGPLLTGLAACGTAFVGSSHGPWAATLGVVAGAMASVVNTMEHGGQVGMVFEMYRGNAGFFRMMEESIESNLNERDVGRRENGELFEMKVALQLGRSLSGLKDLAASSYSSSQKGEAIEEFASKLF
SIO_010081: LOC100241831
subclass of: SO_0000673
so part of: LOC100241831
location: complement(709419..710708)
location: region:709419-710708:-1
so has part: feature:709419-710708:-1:exon

XP_003632952.1
type: Protein
SIO_000068: ncbiprotein

position:709419:-1
position: 709419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710708:-1
position: 710708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:709419-710708:-1:exon

LOC100246962
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100246962
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(714878..716663)
location: region:714878-716663:-1
so has part: feature:714878-716663:-1:exon
subclass of: SO_0000010

100246962
type: Gene
SIO_000068: ncbigene

position:714878:-1
position: 714878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:716663:-1
position: 716663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:714878-716663:-1:exon

LOC100246962
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100246962
product: probable F-box protein At4g22030
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_002263217.3
SIO_010081: LOC100246962
subclass of: SO_0000673
so part of: LOC100246962
location: complement(714878..716663)
location: region:714878-716663:-1
so has part: feature:714878-716663:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:714878-716663:-1:exon

LOC100246962
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100246962
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable F-box protein At4g22030
translation: MVSLQFSSAVITSVAYSSSRCRRGMIRATINMPKLQPGRLSLNLPARDLVLQEVLDMGVGLTAATTSNLEKKHEPSTNGIFPSVSNVSDPSVIAKLHAIMEAVADRVEMHKNIGEQRDNWNHLLLTSINAITLTAATMAGIAATSVGGPLVALKISSTLMYLAATGMLVVMNKIQPSQLVEEQRNAARLFKQLHGQIQRTLSCGTPTSTDVEEVMEKVLSLDKAFPLPLLGAMLDKFPKTVEPAVWWPEHRQRQDRQSGRTDGNGWSVELEEEMREVVGVLKRKDTEDYLRLGKIALKVNRMLAISGPLLTGLAACGTAFVGSSHGPWAATLGVVAGAMASVVNTMEHGGQVGMVFEMYRSNAGFFRLMEESIESNLNERDVGRRENGELFEMKVALQLGRSLSGLKGLAASSCSSSKKGEAIEEFASKLF
SIO_010081: LOC100246962
subclass of: SO_0000673
so part of: LOC100246962
location: complement(715046..716341)
location: region:715046-716341:-1
so has part: feature:715046-716341:-1:exon

XP_002263253.1
type: Protein
SIO_000068: ncbiprotein

position:715046:-1
position: 715046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:716341:-1
position: 716341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:715046-716341:-1:exon

LOC100853959
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100853959
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(721589..722881)
location: region:721589-722881:-1
so has part: feature:721589-722881:-1:exon
subclass of: SO_0000010

100853959
type: Gene
SIO_000068: ncbigene

position:721589:-1
position: 721589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722881:-1
position: 722881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:721589-722881:-1:exon

LOC100853959
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100853959
product: probable F-box protein At4g22030
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_003632905.1
SIO_010081: LOC100853959
subclass of: SO_0000673
so part of: LOC100853959
location: complement(721589..722881)
location: region:721589-722881:-1
so has part: feature:721589-722881:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:721589-722881:-1:exon

LOC100853959
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100853959
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable F-box protein At4g22030
translation: MANLQSSSGVITSVTYSSSRCRRGMARATINMPKLRTGSLSLKLPARDLVQEVLDMGVSLTAATTGHVEKKYESITDTTFPSVSNVSDPMVIAKLHAIMEAVADRVEMHKNIGEQRDNWNHLLLTSINGITLTAATMAGIAATSVGGPLVALKLSSTLMYLAATGMLVVMNKIQPSQLVEEQRNAARLFKQLHGQIQRTLSCGTPTSTDVEEAMEKVLSLDKAFPLPLLGAMLDKFPKTVEPAVWWPEHRQRQDRQSRRTDGNGWSVELEEEMREVVGVLKRKDTEDYLRLGKIALKVNRILAISGPLLTGLAACGTAFVGSSHGPWAATLGVVAGAMASVVNTMEHGGQVGMVFEMYRSNAGFFRLMEESIESNLNERDVGRRENGELFEMKVALQLGRSLSGLKGLAASSCSSSKKGEAIEEFASKLF
SIO_010081: LOC100853959
subclass of: SO_0000673
so part of: LOC100853959
location: complement(721589..722881)
location: region:721589-722881:-1
so has part: feature:721589-722881:-1:exon

XP_003632953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:721589-722881:-1:exon

LOC100247985
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100247985
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(727144..728436)
location: region:727144-728436:-1
so has part: feature:727144-728436:-1:exon
subclass of: SO_0000010

100247985
type: Gene
SIO_000068: ncbigene

position:727144:-1
position: 727144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728436:-1
position: 728436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:727144-728436:-1:exon

LOC100247985
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100247985
product: probable F-box protein At4g22030
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_002266340.4
SIO_010081: LOC100247985
subclass of: SO_0000673
so part of: LOC100247985
location: complement(727144..728436)
location: region:727144-728436:-1
so has part: feature:727144-728436:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:727144-728436:-1:exon

LOC100247985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100247985
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable F-box protein At4g22030
translation: MSTLQSSSGVITSVAYSSSRCRRGMTRATINMPKLRTGSLSLKLPARDLVQEVLDMGVSLTAATTGHVEKKNESRADSTIPSVSNVSDPMVMAKLHEIMEAVADRVEMHKNIGEQRDNWNHLLLTSINAITLTAATMAGIAATSVGGPLVALKLSSTLMYLAATGMLVVMNKIQPSQLVEEQRNAARLFKQLHGQVQRTLSCGTPTSIDVEEAMEKVLALDKAYPLPLLGAMLDKFPETVEPAVWWPQHRQRQERQSGRTDGNGWSVELEEEMREVVGVLKRKDTEDYLRLGKIALKVNKILAISGPLLTGLAACGTAFVGSSHGPWAATLGVVAGAMASVVNTMEHGGQVGMVFEMYRSNAGFFRLMEESIESNLNERDVGRRENGELFEMKVALQLGRSLSGLKDLAASSYYSSKKGEAIEEFASKLF
SIO_010081: LOC100247985
subclass of: SO_0000673
so part of: LOC100247985
location: complement(727144..728436)
location: region:727144-728436:-1
so has part: feature:727144-728436:-1:exon

XP_002266376.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:727144-728436:-1:exon

LOC100242685
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100242685
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(731499..732916)
location: region:731499-732916:-1
so has part: feature:731499-732916:-1:exon
subclass of: SO_0000010

100242685
type: Gene
SIO_000068: ncbigene

position:731499:-1
position: 731499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:732916:-1
position: 732916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:731499-732916:-1:exon

LOC100242685
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100242685
product: probable F-box protein At4g22030
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_003632906.3
SIO_010081: LOC100242685
subclass of: SO_0000673
so part of: LOC100242685
location: complement(731499..732916)
location: region:731499-732916:-1
so has part: feature:731499-732916:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:731499-732916:-1:exon

LOC100242685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100242685
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable F-box protein At4g22030
translation: MASLQSSSVTGSVAYSSSRCRRGMIRATINMPKLRTSGISLKLPTRDLVQEVLDMGVGLTAATTGHVEKKYESITDTTFPSVSNVSDPMVIAKLHAIMEAVADRVEMHKNIGEQRDNWNHLLLTSINAITLTAATMAGIAATSVGGPLVALKLSSTLMYLAATGMLVVMNKIQPSQLVEEQRNAVRLFKQLHGQIQRTLSCGTPTSTDVEEAMEKVLALDKAYPLPLLGAMLDKFPKTVEPAVWWPQNKQRQRHSGRTDGNGWSMELEEEMREVVGVLKRKDTEDYLRLGKIALKVNKILAISGPLLTGLAACGTAFVGSSHGPWAATLGVVAGAMASVVNTMEHGGQVGMVFEMYRSTAGFFRLMEETIESNLSERDVGRRENGELFEMKVALQLGRSLSGLKDLAASSYSSSKNGDAIEEFASKLF
SIO_010081: LOC100242685
subclass of: SO_0000673
so part of: LOC100242685
location: complement(731564..732850)
location: region:731564-732850:-1
so has part: feature:731564-732850:-1:exon

XP_003632954.1
type: Protein
SIO_000068: ncbiprotein

position:731564:-1
position: 731564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:732850:-1
position: 732850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:731564-732850:-1:exon

LOC100258242
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100258242
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(734166..738489)
location: region:734166-738489:-1
so has part: feature:734166-738489:-1:exon
subclass of: SO_0000010

100258242
type: Gene
SIO_000068: ncbigene

position:734166:-1
position: 734166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:738489:-1
position: 738489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:734166-738489:-1:exon

LOC100258242
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100258242
product: peroxisomal membrane protein PMP22-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 36 ESTs, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_002269300.4
SIO_010081: LOC100258242
subclass of: SO_0000673
so part of: LOC100258242
location: complement(join(734166..734570,735360..735445,735550..735620,735937..736012,736284..736385,737930..738028,738293..738489))
location: region:734166-738489:-1
so has part: feature:738293-738489:-1:exon
so has part: feature:737930-738028:-1:exon
so has part: feature:736284-736385:-1:exon
so has part: feature:735937-736012:-1:exon
so has part: feature:735550-735620:-1:exon
so has part: feature:735360-735445:-1:exon
so has part: feature:734166-734570:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:738293-738489:-1:exon

position:738293:-1
position: 738293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:737930-738028:-1:exon

position:737930:-1
position: 737930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:738028:-1
position: 738028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:736284-736385:-1:exon

position:736284:-1
position: 736284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736385:-1
position: 736385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:735937-736012:-1:exon

position:735937:-1
position: 735937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736012:-1
position: 736012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:735550-735620:-1:exon

position:735550:-1
position: 735550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:735620:-1
position: 735620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:735360-735445:-1:exon

position:735360:-1
position: 735360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:735445:-1
position: 735445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:734166-734570:-1:exon

position:734570:-1
position: 734570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100258242
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100258242
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxisomal membrane protein PMP22 isoform X2
translation: MGSLAKKGLQQYLLQLQHHPLRTKAITAAVLSAVSDIVSQKLSGIQKLQLKRLLLKVLLGFVYLGPFGHFLHILLDKLFKGKKDSKTVAKKVVLEQLTASPWNNFVFMVYYGLVIEGRNWSQVKTKIKKDYPAVQYTSWTFWPVVGWVNHQYVPLQLRVIFHSVIACAWGIFLNLQARSIAAKKA
SIO_010081: LOC100258242
subclass of: SO_0000673
so part of: LOC100258242
location: complement(join(734519..734570,735360..735445,735550..735620,735937..736012,736284..736385,737930..738028,738293..738364))
location: region:734519-738364:-1
so has part: feature:738293-738364:-1:exon
so has part: feature:737930-738028:-1:exon
so has part: feature:736284-736385:-1:exon
so has part: feature:735937-736012:-1:exon
so has part: feature:735550-735620:-1:exon
so has part: feature:735360-735445:-1:exon
so has part: feature:734519-734570:-1:exon

XP_002269336.1
type: Protein
SIO_000068: ncbiprotein

position:734519:-1
position: 734519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:738364:-1
position: 738364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:738293-738364:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:737930-738028:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:736284-736385:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:735937-736012:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:735550-735620:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:735360-735445:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:734519-734570:-1:exon

LOC109123332
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC109123332
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 734856..735864
location: region:734856-735864:1
so has part: feature:734856-735864:1:exon
subclass of: SO_0000011

109123332
type: Gene
SIO_000068: ncbigene

position:734856:1
position: 734856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:735864:1
position: 735864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:734856-735864:1:exon

LOC109123332
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 29760
nc RNA class: lncRNA
gene: LOC109123332
product: uncharacterized LOC109123332
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 100 samples with support for all annotated introns
transcript id: XR_002031055.1
SIO_010081: LOC109123332
subclass of: SO_0000673
so part of: LOC109123332
location: join(734856..735063,735758..735864)
location: region:734856-735864:1
so has part: feature:734856-735063:1:exon
so has part: feature:735758-735864:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:734856-735063:1:exon

position:735063:1
position: 735063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:735758-735864:1:exon

position:735758:1
position: 735758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100258242
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100258242
product: peroxisomal membrane protein PMP22-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 254 samples with support for all annotated introns
transcript id: XM_010657075.2
SIO_010081: LOC100258242
subclass of: SO_0000673
so part of: LOC100258242
location: complement(join(735168..735264,735360..735445,735550..735620,735937..736012,736284..736385,737930..738028,738293..738488))
location: region:735168-738488:-1
so has part: feature:738293-738488:-1:exon
so has part: feature:737930-738028:-1:exon
so has part: feature:736284-736385:-1:exon
so has part: feature:735937-736012:-1:exon
so has part: feature:735550-735620:-1:exon
so has part: feature:735360-735445:-1:exon
so has part: feature:735168-735264:-1:exon

position:735168:-1
position: 735168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:738488:-1
position: 738488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:738293-738488:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:737930-738028:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:736284-736385:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:735937-736012:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:735550-735620:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:735360-735445:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:735168-735264:-1:exon

position:735264:-1
position: 735264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100258242
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100258242
product: peroxisomal membrane protein PMP22-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 180 samples with support for all annotated introns
transcript id: XM_019222745.1
SIO_010081: LOC100258242
subclass of: SO_0000673
so part of: LOC100258242
location: complement(join(735168..735264,735360..735445,735550..735620,735937..736012,736284..736385,737930..738028,738184..738276))
location: region:735168-738276:-1
so has part: feature:738184-738276:-1:exon
so has part: feature:737930-738028:-1:exon
so has part: feature:736284-736385:-1:exon
so has part: feature:735937-736012:-1:exon
so has part: feature:735550-735620:-1:exon
so has part: feature:735360-735445:-1:exon
so has part: feature:735168-735264:-1:exon

position:738276:-1
position: 738276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:738184-738276:-1:exon

position:738184:-1
position: 738184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:737930-738028:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:736284-736385:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:735937-736012:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:735550-735620:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:735360-735445:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:735168-735264:-1:exon

LOC100258242
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100258242
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxisomal membrane protein PMP22 isoform X1
translation: MGSLAKKGLQQYLLQLQHHPLRTKAITAAVLSAVSDIVSQKLSGIQKLQLKRLLLKVLLGFVYLGPFGHFLHILLDKLFKGKKDSKTVAKKVVLEQLTASPWNNFVFMVYYGLVIEGRNWSQVKTKIKKDYPAVQYTSWTFWPVVGWVNHQYVPLQLRVIFHSVIACAWGIFLNLQARSIAAKKA
SIO_010081: LOC100258242
subclass of: SO_0000673
so part of: LOC100258242
location: complement(join(735213..735264,735360..735445,735550..735620,735937..736012,736284..736385,737930..738028,738293..738364))
location: region:735213-738364:-1
so has part: feature:738293-738364:-1:exon
so has part: feature:737930-738028:-1:exon
so has part: feature:736284-736385:-1:exon
so has part: feature:735937-736012:-1:exon
so has part: feature:735550-735620:-1:exon
so has part: feature:735360-735445:-1:exon
so has part: feature:735213-735264:-1:exon

XP_010655377.1
type: Protein
SIO_000068: ncbiprotein

position:735213:-1
position: 735213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:738293-738364:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:737930-738028:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:736284-736385:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:735937-736012:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:735550-735620:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:735360-735445:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:735213-735264:-1:exon

LOC100258242
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100258242
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxisomal membrane protein PMP22 isoform X3
translation: MGKFGTLEGNICWAITAAVLSAVSDIVSQKLSGIQKLQLKRLLLKVLLGFVYLGPFGHFLHILLDKLFKGKKDSKTVAKKVVLEQLTASPWNNFVFMVYYGLVIEGRNWSQVKTKIKKDYPAVQYTSWTFWPVVGWVNHQYVPLQLRVIFHSVIACAWGIFLNLQARSIAAKKA
SIO_010081: LOC100258242
subclass of: SO_0000673
so part of: LOC100258242
location: complement(join(735213..735264,735360..735445,735550..735620,735937..736012,736284..736385,737930..738028,738184..738222))
location: region:735213-738222:-1
so has part: feature:738184-738222:-1:exon
so has part: feature:737930-738028:-1:exon
so has part: feature:736284-736385:-1:exon
so has part: feature:735937-736012:-1:exon
so has part: feature:735550-735620:-1:exon
so has part: feature:735360-735445:-1:exon
so has part: feature:735213-735264:-1:exon

XP_019078290.1
type: Protein
SIO_000068: ncbiprotein

position:738222:-1
position: 738222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:738184-738222:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:737930-738028:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:736284-736385:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:735937-736012:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:735550-735620:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:735360-735445:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:735213-735264:-1:exon

LOC100259770
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100259770
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 740403..741725
location: region:740403-741725:1
so has part: feature:740403-741725:1:exon
subclass of: SO_0000010

100259770
type: Gene
SIO_000068: ncbigene

position:740403:1
position: 740403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741725:1
position: 741725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:740403-741725:1:exon

LOC100259770
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100259770
product: probable F-box protein At4g22030
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_002266444.3
SIO_010081: LOC100259770
subclass of: SO_0000673
so part of: LOC100259770
location: 740403..741725
location: region:740403-741725:1
so has part: feature:740403-741725:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:740403-741725:1:exon

LOC100259770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100259770
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable F-box protein At4g22030
translation: MSSLQSSSLILSSSKRSINAAIHLPKARTPASFSIPKPPLTTNLKVAEELKIGDGLITEKSSVKAADSAATAKLYAILEAVVDRVEMHVNLGEQRNNWNTLLLNSINMITLAAATMAGVSASVGVGEPLLAFKVSSTLLFSAATGMLLVMNKIQPSQLAEEQRNAARLFRQLQAQIETVLAVRTPTQADVESVMEKVLALDKAYPLPLLGVMIEKFPETFQPAVWWPGNDSHQGRRELEKECNENNGWSEKMEVEMREVVKVLKRKDAEDYMRLGNLGLKMNKVLAISGPFLTGMAAAASALAGPSSQSPWAATLAVAAGSLASVVNTLEHGGQVGMVLEMYRNCTGFFQNMEESIESTLGETELQKRENGELFEMKVALQLGRSLSQLRDLAGEADSTNEFASKLF
SIO_010081: LOC100259770
subclass of: SO_0000673
so part of: LOC100259770
location: 740431..741654
location: region:740431-741654:1
so has part: feature:740431-741654:1:exon

XP_002266480.2
type: Protein
SIO_000068: ncbiprotein

position:740431:1
position: 740431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741654:1
position: 741654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:740431-741654:1:exon

LOC100254668
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100254668
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 743496..744968
location: region:743496-744968:1
so has part: feature:743496-744968:1:exon
subclass of: SO_0000010

100254668
type: Gene
SIO_000068: ncbigene

position:743496:1
position: 743496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744968:1
position: 744968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743496-744968:1:exon

LOC100254668
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100254668
product: probable F-box protein At4g22030
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_003632907.2
SIO_010081: LOC100254668
subclass of: SO_0000673
so part of: LOC100254668
location: 743496..744968
location: region:743496-744968:1
so has part: feature:743496-744968:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:743496-744968:1:exon

LOC100254668
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100254668
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable F-box protein At4g22030
translation: MEWAESRQSAVNIPKSDLPSPVIQPVALYKYHQPPLFSSHQTTNNRKTREIRTPSMASLQSSSLIFSSSKRSINAAIHLPKARTPASFSIPKPPLTTNLKVAEELKIGDGLITEKSSVKAADSATTAKLYAILEAVVDRVEMHVNLGEQRNNWNTLLLNSINMITLAAATMAGVSASVGVGEPLLAFKVSSTLLFSAATGMLLVMNKIQPSQLAEEQRNAARLFRQLQAQIETVLAVRTPTQADVESVMEKVLALDKAYPLPLLGVMIEKFPETFQPAVWWPGNDSHQGRRELEKECNENNGWSEKMEVEMREVVKVLKRKDAEDYMRLGNLGLKINKVLAISGPFLTGMAAAASALAGPSSQSPWAATLAVAAGSLASVVNTLEHGGQVGMVLEMYRNCTGFFQNMEESIESTLGETELQKRENGELFEMKVALQLGRSLSQLRDLAGEADSTNEFASKLF
SIO_010081: LOC100254668
subclass of: SO_0000673
so part of: LOC100254668
location: 743496..744884
location: region:743496-744884:1
so has part: feature:743496-744884:1:exon

XP_003632955.1
type: Protein
SIO_000068: ncbiprotein

position:744884:1
position: 744884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743496-744884:1:exon

LOC100244395
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100244395
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 754252..773049
location: region:754252-773049:1
so has part: feature:754252-773049:1:exon
subclass of: SO_0000010

100244395
type: Gene
SIO_000068: ncbigene

position:754252:1
position: 754252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:773049:1
position: 773049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:754252-773049:1:exon

LOC100244395
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100244395
product: dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1, mitochondrial, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 72 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 247 samples with support for all annotated introns
transcript id: XM_002266557.4
SIO_010081: LOC100244395
subclass of: SO_0000673
so part of: LOC100244395
location: join(754252..754436,754790..754861,755007..755084,756385..756445,756562..756589,756894..756964,757067..757141,757274..757329,757409..757453,757580..757852,758034..758128,758400..758490,758607..758717,771734..771928,772437..773049)
location: region:754252-773049:1
so has part: feature:754252-754436:1:exon
so has part: feature:754790-754861:1:exon
so has part: feature:755007-755084:1:exon
so has part: feature:756385-756445:1:exon
so has part: feature:756562-756589:1:exon
so has part: feature:756894-756964:1:exon
so has part: feature:757067-757141:1:exon
so has part: feature:757274-757329:1:exon
so has part: feature:757409-757453:1:exon
so has part: feature:757580-757852:1:exon
so has part: feature:758034-758128:1:exon
so has part: feature:758400-758490:1:exon
so has part: feature:758607-758717:1:exon
so has part: feature:771734-771928:1:exon
so has part: feature:772437-773049:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:754252-754436:1:exon

position:754436:1
position: 754436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:754790-754861:1:exon

position:754790:1
position: 754790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754861:1
position: 754861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:755007-755084:1:exon

position:755007:1
position: 755007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755084:1
position: 755084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:756385-756445:1:exon

position:756385:1
position: 756385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:756445:1
position: 756445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:756562-756589:1:exon

position:756562:1
position: 756562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:756589:1
position: 756589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:756894-756964:1:exon

position:756894:1
position: 756894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:756964:1
position: 756964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:757067-757141:1:exon

position:757067:1
position: 757067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757141:1
position: 757141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:757274-757329:1:exon

position:757274:1
position: 757274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757329:1
position: 757329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:757409-757453:1:exon

position:757409:1
position: 757409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757453:1
position: 757453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:757580-757852:1:exon

position:757580:1
position: 757580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757852:1
position: 757852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:758034-758128:1:exon

position:758034:1
position: 758034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758128:1
position: 758128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:758400-758490:1:exon

position:758400:1
position: 758400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758490:1
position: 758490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:758607-758717:1:exon

position:758607:1
position: 758607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758717:1
position: 758717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:771734-771928:1:exon

position:771734:1
position: 771734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:771928:1
position: 771928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:772437-773049:1:exon

position:772437:1
position: 772437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100244395
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100244395
product: dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1, mitochondrial, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 42 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 94 samples with support for all annotated introns
transcript id: XM_010657076.2
SIO_010081: LOC100244395
subclass of: SO_0000673
so part of: LOC100244395
location: join(754475..754617,754790..754861,755007..755084,756385..756445,756562..756589,756894..756964,757067..757141,757274..757329,757409..757453,757580..757852,758034..758128,758400..758490,758607..758717,771734..771928,772437..773049)
location: region:754475-773049:1
so has part: feature:754475-754617:1:exon
so has part: feature:754790-754861:1:exon
so has part: feature:755007-755084:1:exon
so has part: feature:756385-756445:1:exon
so has part: feature:756562-756589:1:exon
so has part: feature:756894-756964:1:exon
so has part: feature:757067-757141:1:exon
so has part: feature:757274-757329:1:exon
so has part: feature:757409-757453:1:exon
so has part: feature:757580-757852:1:exon
so has part: feature:758034-758128:1:exon
so has part: feature:758400-758490:1:exon
so has part: feature:758607-758717:1:exon
so has part: feature:771734-771928:1:exon
so has part: feature:772437-773049:1:exon

position:754475:1
position: 754475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:754475-754617:1:exon

position:754617:1
position: 754617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:754790-754861:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:755007-755084:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:756385-756445:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:756562-756589:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:756894-756964:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:757067-757141:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:757274-757329:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:757409-757453:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:757580-757852:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:758034-758128:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:758400-758490:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:758607-758717:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:771734-771928:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:772437-773049:1:exon

LOC100244395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100244395
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1, mitochondrial
translation: MWAIVRRKVASGSSAASVLGQSLSKIRPAAASVPRGYTTTAKEALLLGGGSKIIRNVGHYKYLGSLVSSKPVREVTSFLQIDSPIQVQHRPFSSDKGDLVDAVVPFMGESISDGTLAKFLKKPGDHVEVDEPIAQIETDKVTIDVASPEAGVVQKFVAKEGDVVEPGTKIAVISKSGEGVTHVAPSEKTPSKASPEPSPTEKEAVDKPKPKSETPPPKEKPKAPAPPPPRPSATEPVLPPKERERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDMTNLMKLRSDYKDAFLEKHGVKLGLMSGFIKAAVSGLQNQPIINAVIDGDDIIYRDYIDISIAVGTPKGLVVPVIRNADGMNFADIEKAINTLARKANDGTISIDEMAGGSFTISNGGVYGSLLSTPIINPPQSAILGMHSIVNRPMVVGGNVVSRPMMYIALTYDHRLIDGREAVFFLRRIKDVVEDPRRLLLDI
SIO_010081: LOC100244395
subclass of: SO_0000673
so part of: LOC100244395
location: join(754811..754861,755007..755084,756385..756445,756562..756589,756894..756964,757067..757141,757274..757329,757409..757453,757580..757852,758034..758128,758400..758490,758607..758717,771734..771928,772437..772628)
location: region:754811-772628:1
so has part: feature:754811-754861:1:exon
so has part: feature:755007-755084:1:exon
so has part: feature:756385-756445:1:exon
so has part: feature:756562-756589:1:exon
so has part: feature:756894-756964:1:exon
so has part: feature:757067-757141:1:exon
so has part: feature:757274-757329:1:exon
so has part: feature:757409-757453:1:exon
so has part: feature:757580-757852:1:exon
so has part: feature:758034-758128:1:exon
so has part: feature:758400-758490:1:exon
so has part: feature:758607-758717:1:exon
so has part: feature:771734-771928:1:exon
so has part: feature:772437-772628:1:exon

XP_002266593.2
type: Protein
SIO_000068: ncbiprotein

position:754811:1
position: 754811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:772628:1
position: 772628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:754811-754861:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:755007-755084:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:756385-756445:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:756562-756589:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:756894-756964:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:757067-757141:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:757274-757329:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:757409-757453:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:757580-757852:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:758034-758128:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:758400-758490:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:758607-758717:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:771734-771928:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:772437-772628:1:exon

LOC100244395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100244395
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1, mitochondrial
translation: MWAIVRRKVASGSSAASVLGQSLSKIRPAAASVPRGYTTTAKEALLLGGGSKIIRNVGHYKYLGSLVSSKPVREVTSFLQIDSPIQVQHRPFSSDKGDLVDAVVPFMGESISDGTLAKFLKKPGDHVEVDEPIAQIETDKVTIDVASPEAGVVQKFVAKEGDVVEPGTKIAVISKSGEGVTHVAPSEKTPSKASPEPSPTEKEAVDKPKPKSETPPPKEKPKAPAPPPPRPSATEPVLPPKERERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDMTNLMKLRSDYKDAFLEKHGVKLGLMSGFIKAAVSGLQNQPIINAVIDGDDIIYRDYIDISIAVGTPKGLVVPVIRNADGMNFADIEKAINTLARKANDGTISIDEMAGGSFTISNGGVYGSLLSTPIINPPQSAILGMHSIVNRPMVVGGNVVSRPMMYIALTYDHRLIDGREAVFFLRRIKDVVEDPRRLLLDI
SIO_010081: LOC100244395
subclass of: SO_0000673
so part of: LOC100244395
location: join(754811..754861,755007..755084,756385..756445,756562..756589,756894..756964,757067..757141,757274..757329,757409..757453,757580..757852,758034..758128,758400..758490,758607..758717,771734..771928,772437..772628)
location: region:754811-772628:1
so has part: feature:754811-754861:1:exon
so has part: feature:755007-755084:1:exon
so has part: feature:756385-756445:1:exon
so has part: feature:756562-756589:1:exon
so has part: feature:756894-756964:1:exon
so has part: feature:757067-757141:1:exon
so has part: feature:757274-757329:1:exon
so has part: feature:757409-757453:1:exon
so has part: feature:757580-757852:1:exon
so has part: feature:758034-758128:1:exon
so has part: feature:758400-758490:1:exon
so has part: feature:758607-758717:1:exon
so has part: feature:771734-771928:1:exon
so has part: feature:772437-772628:1:exon

XP_010655378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:754811-754861:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:755007-755084:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:756385-756445:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:756562-756589:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:756894-756964:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:757067-757141:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:757274-757329:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:757409-757453:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:757580-757852:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:758034-758128:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:758400-758490:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:758607-758717:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:771734-771928:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:772437-772628:1:exon

LOC104880459
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC104880459
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 761130..764574
location: region:761130-764574:1
so has part: feature:761130-764574:1:exon
subclass of: SO_0000011

104880459
type: Gene
SIO_000068: ncbigene

position:761130:1
position: 761130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:764574:1
position: 764574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:761130-764574:1:exon

LOC104880459
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 29760
nc RNA class: lncRNA
gene: LOC104880459
product: uncharacterized LOC104880459
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XR_786703.2
SIO_010081: LOC104880459
subclass of: SO_0000673
so part of: LOC104880459
location: join(761130..762831,762871..764574)
location: region:761130-764574:1
so has part: feature:761130-762831:1:exon
so has part: feature:762871-764574:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:761130-762831:1:exon

position:762831:1
position: 762831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:762871-764574:1:exon

position:762871:1
position: 762871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100258816
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100258816
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 779471..787598
location: region:779471-787598:1
so has part: feature:779471-787598:1:exon
subclass of: SO_0000010

100258816
type: Gene
SIO_000068: ncbigene

position:779471:1
position: 779471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787598:1
position: 787598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:779471-787598:1:exon

LOC100258816
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100258816
product: DNA repair protein RAD16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019222514.1
SIO_010081: LOC100258816
subclass of: SO_0000673
so part of: LOC100258816
location: join(779471..779569,779710..779811,780777..781657,782025..782147,782246..782319,782589..782643,782983..783126,783238..783323,783830..783899,784924..785010,785129..785341,786434..786538,786621..786773,787013..787101,787212..787292,787379..787598)
location: region:779471-787598:1
so has part: feature:779471-779569:1:exon
so has part: feature:779710-779811:1:exon
so has part: feature:780777-781657:1:exon
so has part: feature:782025-782147:1:exon
so has part: feature:782246-782319:1:exon
so has part: feature:782589-782643:1:exon
so has part: feature:782983-783126:1:exon
so has part: feature:783238-783323:1:exon
so has part: feature:783830-783899:1:exon
so has part: feature:784924-785010:1:exon
so has part: feature:785129-785341:1:exon
so has part: feature:786434-786538:1:exon
so has part: feature:786621-786773:1:exon
so has part: feature:787013-787101:1:exon
so has part: feature:787212-787292:1:exon
so has part: feature:787379-787598:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:779471-779569:1:exon

position:779569:1
position: 779569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:779710-779811:1:exon

position:779710:1
position: 779710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:779811:1
position: 779811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:780777-781657:1:exon

position:780777:1
position: 780777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:781657:1
position: 781657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:782025-782147:1:exon

position:782025:1
position: 782025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782147:1
position: 782147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:782246-782319:1:exon

position:782246:1
position: 782246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782319:1
position: 782319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:782589-782643:1:exon

position:782589:1
position: 782589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782643:1
position: 782643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:782983-783126:1:exon

position:782983:1
position: 782983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783126:1
position: 783126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:783238-783323:1:exon

position:783238:1
position: 783238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783323:1
position: 783323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:783830-783899:1:exon

position:783830:1
position: 783830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783899:1
position: 783899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:784924-785010:1:exon

position:784924:1
position: 784924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:785010:1
position: 785010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:785129-785341:1:exon

position:785129:1
position: 785129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:785341:1
position: 785341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:786434-786538:1:exon

position:786434:1
position: 786434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:786538:1
position: 786538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:786621-786773:1:exon

position:786621:1
position: 786621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:786773:1
position: 786773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:787013-787101:1:exon

position:787013:1
position: 787013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787101:1
position: 787101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:787212-787292:1:exon

position:787212:1
position: 787212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787292:1
position: 787292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:787379-787598:1:exon

position:787379:1
position: 787379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100258816
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100258816
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA repair protein RAD16
translation: MGRNSLAGVPEPTAVGAEDERPGNEDSSNDMEMDDEPVLEQIMEFASANRDDNSDQLKGDDEQIVEDFNFTYMRRGKNKPRLQWEILEEENRTLVDSFEMQNDASHDNEEDIAETAEAPPEMLVPLLRYQKEWLGWALTQEESPCRGGILADEMGMGKTIQAIALVLAKRAINRSNAGTSSSSPTLVICPLAALKQWETEIIQCMPPGSVKVLVYHGARKRVTGQDFSGYDFVLTTYSTVEAECRCRVLLPNKVCDFCGKELDRENMNFHGRILCQKSYQGTRHPREMHDNGAGRNTRDRSSRKKQDKARTGSSKLNPDDAKPYEPERKLFLGSVRWERIILDEAHAIKSRNNSTTKAILALKSKYKWALTGTPLQNSMEEIYSLIRFLQVYPYAYFFCWWCDCKSLDYVHSASCPCIHGRHFCWWNKYVSRPLQMENHQNSRRARILLTQKVLKSIMLRRTKKSIAVDLGLPLKTVTLRRDALDITEEDYYQTLYKECQLEFNRYVEDGTLMNYYVHILELITRLRQALDHPYLVVHSKSGEALCDICKWVAKDLVVTSCGHTFCKACLEDFTKILGKSLCPTCSLPFTPRKICGGLFAEAMGFKTSSILGRISLGNFPTSTKIEALKEEIRFMVEMDGSAKGIVFSQFTSFLDLISYSLHQSGINCVQLVGKMTATAKDAAVKRFNEDPDCKIFLTSLKSGGAALNLPVASYVFLMEPWWNPFVEQQAYDRIHRIGQYKPVRVIKFIIENTIEERILELQEKKESLSEGALGSTDMLGNLSTEDLRDLFI
SIO_010081: LOC100258816
subclass of: SO_0000673
so part of: LOC100258816
location: join(779521..779569,779710..779811,780777..781657,782025..782147,782246..782319,782589..782643,782983..783126,783238..783323,783830..783899,784924..785010,785129..785341,786434..786538,786621..786773,787013..787101,787212..787292,787379..787445)
location: region:779521-787445:1
so has part: feature:779521-779569:1:exon
so has part: feature:779710-779811:1:exon
so has part: feature:780777-781657:1:exon
so has part: feature:782025-782147:1:exon
so has part: feature:782246-782319:1:exon
so has part: feature:782589-782643:1:exon
so has part: feature:782983-783126:1:exon
so has part: feature:783238-783323:1:exon
so has part: feature:783830-783899:1:exon
so has part: feature:784924-785010:1:exon
so has part: feature:785129-785341:1:exon
so has part: feature:786434-786538:1:exon
so has part: feature:786621-786773:1:exon
so has part: feature:787013-787101:1:exon
so has part: feature:787212-787292:1:exon
so has part: feature:787379-787445:1:exon

XP_019078059.1
type: Protein
SIO_000068: ncbiprotein

position:779521:1
position: 779521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787445:1
position: 787445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:779521-779569:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:779710-779811:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:780777-781657:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:782025-782147:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:782246-782319:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:782589-782643:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:782983-783126:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:783238-783323:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:783830-783899:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:784924-785010:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:785129-785341:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:786434-786538:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:786621-786773:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:787013-787101:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:787212-787292:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:787379-787445:1:exon