Vitis vinifera cultivar PN40024 chromosome 2, 12X, whole genome shotgun sequence.
type: Entry
definition: Vitis vinifera cultivar PN40024 chromosome 2, 12X, whole genome shotgun sequence.
sequence version: NC_012008.3
sequence date: 2016-11-25
sequence: sequence
division: CON
label: NC_012008.3
type: RefSeq
SIO_000068: refseq
dblink: PRJNA33471
dblink: SAMEA2272750
keyword: WGS
keyword: RefSeq
source: Vitis vinifera (wine grape)
organism: Vitis vinifera
taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Vitis.
reference: 1
references: 17721507
reference: 2
references: 9023104
comment: REFSEQ INFORMATION: The reference sequence is identical to\nFN597017.1.\nOn Dec 7, 2011 this sequence version replaced gi:225571691.\nAssembly Name: 12X\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by GENOSCOPE, CRIBI (Consortium\nVIGNA) and IGA in September 2009\n(http://www.genoscope.cns.fr/vitis, http://www.vitisgenome.it/ and\nhttp://www.appliedgenomics.org). The original whole-genome shotgun\nproject has the accession CAAP00000000.3.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Vitis vinifera Annotation Release\n 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 7.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 18779844
topology: linear
so has quality: SO_0000987
location: 1..18779844
location: region:1-18779844:1
RO_0002162: 29760

NC_012008
type: RefSeq
SIO_000068: refseq

PRJNA33471
type: BioProject
SIO_000068: bioproject

SAMEA2272750
type: BioSample
SIO_000068: biosample

1
title: The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla
author: Jaillon, O.
author: Aury, J.M.
author: Noel, B.
author: Policriti, A.
author: Clepet, C.
author: Casagrande, A.
author: Choisne, N.
author: Aubourg, S.
author: Vitulo, N.
author: Jubin, C.
author: Vezzi, A.
author: Legeai, F.
author: Hugueney, P.
author: Dasilva, C.
author: Horner, D.
author: Mica, E.
author: Jublot, D.
author: Poulain, J.
author: Bruyere, C.
author: Billault, A.
author: Segurens, B.
author: Gouyvenoux, M.
author: Ugarte, E.
author: Cattonaro, F.
author: Anthouard, V.
author: Vico, V.
author: Del Fabbro, C.
author: Alaux, M.
author: Di Gaspero, G.
author: Dumas, V.
author: Felice, N.
author: Paillard, S.
author: Juman, I.
author: Moroldo, M.
author: Scalabrin, S.
author: Canaguier, A.
author: Le Clainche, I.
author: Malacrida, G.
author: Durand, E.
author: Pesole, G.
author: Laucou, V.
author: Chatelet, P.
author: Merdinoglu, D.
author: Delledonne, M.
author: Pezzotti, M.
author: Lecharny, A.
author: Scarpelli, C.
author: Artiguenave, F.
author: Pe, M.E.
author: Valle, G.
author: Morgante, M.
author: Caboche, M.
author: Adam-Blondon, A.F.
author: Weissenbach, J.
author: Quetier, F.
author: Wincker, P.
journal: Nature
volume: 449
issue: 7161
pages: 463-467
year: 2007
pubmed: 17721507

17721507
type: PubMed
SIO_000068: pubmed

2
title: tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
author: Lowe, T.M.
author: Eddy, S.R.
journal: Nucleic Acids Res.
volume: 25
issue: 5
pages: 955-964
year: 1997
pubmed: 9023104
comments: This is the methods paper for tRNAscan-SE.

9023104
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18779844:1
position: 18779844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-18779844:1:source
so part of: sequence
organism: Vitis vinifera
mol type: genomic DNA
cultivar: PN40024
chromosome: 2

29760
type: Taxonomy
SIO_000068: taxonomy

LOC100854724
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100854724
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12464..13764)
location: region:12464-13764:-1
so has part: feature:12464-13764:-1:exon
subclass of: SO_0000010

100854724
type: Gene
SIO_000068: ncbigene

position:12464:-1
position: 12464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13764:-1
position: 13764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12464-13764:-1:exon

LOC100854724
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100854724
product: gibberellin 20 oxidase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 59% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_003631324.2
SIO_010081: LOC100854724
subclass of: SO_0000673
so part of: LOC100854724
location: complement(join(12464..12719,12801..13128,13274..13764))
location: region:12464-13764:-1
so has part: feature:13274-13764:-1:exon
so has part: feature:12801-13128:-1:exon
so has part: feature:12464-12719:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13274-13764:-1:exon

position:13274:-1
position: 13274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12801-13128:-1:exon

position:12801:-1
position: 12801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13128:-1
position: 13128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12464-12719:-1:exon

position:12719:-1
position: 12719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100854724
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100854724
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gibberellin 20 oxidase 1
translation: MALEIEEHPVESLSSGPKLCVKNFVWSEHEWPLINHDDFADGDDIPTISLEGNLSGKPCQDYDKVCQVMVTACEKWGFFKLVDHGVAIETVENVKVQLNELFDLPMDQKLKGARSTSLPLGYCASNPEYGQNLPWAEILQLLQSPQQVVAFARKVFGDQHQPFSNAMVKYMQALDKLGMKIFEMLAHGMGLPDDFFTKNFEEKEATMIRVNRYPPCPLPEKCLGVGSHSDPHTLTILLQDDVGGLQVLKSDNQWIGIRPVPNSFVINIGDTLEAWTNGRLRSVVHRAVVNKEKHRLSVAYFLSPATSAIIDCPPQLIESSTNLRKYVSFTWGEFRKELLTQKRVVGKTALNRYLISP
SIO_010081: LOC100854724
subclass of: SO_0000673
so part of: LOC100854724
location: complement(join(12465..12719,12801..13128,13274..13764))
location: region:12465-13764:-1
so has part: feature:13274-13764:-1:exon
so has part: feature:12801-13128:-1:exon
so has part: feature:12465-12719:-1:exon

XP_003631372.1
type: Protein
SIO_000068: ncbiprotein

position:12465:-1
position: 12465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13274-13764:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12801-13128:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12465-12719:-1:exon

LOC100245153
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100245153
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 19177..78133
location: region:19177-78133:1
so has part: feature:19177-78133:1:exon
subclass of: SO_0000010

100245153
type: Gene
SIO_000068: ncbigene

position:19177:1
position: 19177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78133:1
position: 78133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19177-78133:1:exon

LOC100245153
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100245153
product: polycomb group protein EMBRYONIC FLOWER 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010659562.2
SIO_010081: LOC100245153
subclass of: SO_0000673
so part of: LOC100245153
location: join(19177..19397,24188..24339,24963..25018,33538..33655,33739..33904,33993..34019,36582..36721,46874..46936,47043..47161,55374..55438,60382..60434,64146..64199,64281..64340,64813..64859,64949..65082,68789..69077,73627..73675,75354..75437,76852..76931,77120..77209,77708..78133)
location: region:19177-78133:1
so has part: feature:19177-19397:1:exon
so has part: feature:24188-24339:1:exon
so has part: feature:24963-25018:1:exon
so has part: feature:33538-33655:1:exon
so has part: feature:33739-33904:1:exon
so has part: feature:33993-34019:1:exon
so has part: feature:36582-36721:1:exon
so has part: feature:46874-46936:1:exon
so has part: feature:47043-47161:1:exon
so has part: feature:55374-55438:1:exon
so has part: feature:60382-60434:1:exon
so has part: feature:64146-64199:1:exon
so has part: feature:64281-64340:1:exon
so has part: feature:64813-64859:1:exon
so has part: feature:64949-65082:1:exon
so has part: feature:68789-69077:1:exon
so has part: feature:73627-73675:1:exon
so has part: feature:75354-75437:1:exon
so has part: feature:76852-76931:1:exon
so has part: feature:77120-77209:1:exon
so has part: feature:77708-78133:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19177-19397:1:exon

position:19397:1
position: 19397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:24188-24339:1:exon

position:24188:1
position: 24188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24339:1
position: 24339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:24963-25018:1:exon

position:24963:1
position: 24963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25018:1
position: 25018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:33538-33655:1:exon

position:33538:1
position: 33538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33655:1
position: 33655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:33739-33904:1:exon

position:33739:1
position: 33739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33904:1
position: 33904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:33993-34019:1:exon

position:33993:1
position: 33993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34019:1
position: 34019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:36582-36721:1:exon

position:36582:1
position: 36582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36721:1
position: 36721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:46874-46936:1:exon

position:46874:1
position: 46874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46936:1
position: 46936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:47043-47161:1:exon

position:47043:1
position: 47043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47161:1
position: 47161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:55374-55438:1:exon

position:55374:1
position: 55374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55438:1
position: 55438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:60382-60434:1:exon

position:60382:1
position: 60382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60434:1
position: 60434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:64146-64199:1:exon

position:64146:1
position: 64146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64199:1
position: 64199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:64281-64340:1:exon

position:64281:1
position: 64281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64340:1
position: 64340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:64813-64859:1:exon

position:64813:1
position: 64813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64859:1
position: 64859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:64949-65082:1:exon

position:64949:1
position: 64949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65082:1
position: 65082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:68789-69077:1:exon

position:68789:1
position: 68789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69077:1
position: 69077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:73627-73675:1:exon

position:73627:1
position: 73627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73675:1
position: 73675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:75354-75437:1:exon

position:75354:1
position: 75354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75437:1
position: 75437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:76852-76931:1:exon

position:76852:1
position: 76852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76931:1
position: 76931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:77120-77209:1:exon

position:77120:1
position: 77120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77209:1
position: 77209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:77708-78133:1:exon

position:77708:1
position: 77708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100245153
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100245153
product: polycomb group protein EMBRYONIC FLOWER 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 102 samples with support for all annotated introns
transcript id: XM_019226747.1
SIO_010081: LOC100245153
subclass of: SO_0000673
so part of: LOC100245153
location: join(24162..24339,24963..25018,33538..33655,33739..33904,33993..34019,36582..36721,46874..46936,47043..47161,55374..55438,60382..60434,64146..64199,64281..64340,64813..64859,64949..65082,68789..69077,73627..73675,75354..75437,76852..76931,77120..77209,77708..78133)
location: region:24162-78133:1
so has part: feature:24162-24339:1:exon
so has part: feature:24963-25018:1:exon
so has part: feature:33538-33655:1:exon
so has part: feature:33739-33904:1:exon
so has part: feature:33993-34019:1:exon
so has part: feature:36582-36721:1:exon
so has part: feature:46874-46936:1:exon
so has part: feature:47043-47161:1:exon
so has part: feature:55374-55438:1:exon
so has part: feature:60382-60434:1:exon
so has part: feature:64146-64199:1:exon
so has part: feature:64281-64340:1:exon
so has part: feature:64813-64859:1:exon
so has part: feature:64949-65082:1:exon
so has part: feature:68789-69077:1:exon
so has part: feature:73627-73675:1:exon
so has part: feature:75354-75437:1:exon
so has part: feature:76852-76931:1:exon
so has part: feature:77120-77209:1:exon
so has part: feature:77708-78133:1:exon

position:24162:1
position: 24162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24162-24339:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:24963-25018:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:33538-33655:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:33739-33904:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:33993-34019:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:36582-36721:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:46874-46936:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:47043-47161:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:55374-55438:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:60382-60434:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:64146-64199:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:64281-64340:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:64813-64859:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:64949-65082:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:68789-69077:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:73627-73675:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:75354-75437:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:76852-76931:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:77120-77209:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:77708-78133:1:exon

LOC100245153
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100245153
product: polycomb group protein EMBRYONIC FLOWER 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 102 samples with support for all annotated introns
transcript id: XM_019216188.1
SIO_010081: LOC100245153
subclass of: SO_0000673
so part of: LOC100245153
location: join(24162..24339,24963..25018,33538..33655,33739..33904,33993..34019,36582..36721,46874..46936,47043..47161,55374..55438,60382..60434,64146..64199,64281..64340,64813..64856,64949..65082,68789..69077,73627..73675,75354..75437,76852..76931,77120..77209,77708..78133)
location: region:24162-78133:1
so has part: feature:24162-24339:1:exon
so has part: feature:24963-25018:1:exon
so has part: feature:33538-33655:1:exon
so has part: feature:33739-33904:1:exon
so has part: feature:33993-34019:1:exon
so has part: feature:36582-36721:1:exon
so has part: feature:46874-46936:1:exon
so has part: feature:47043-47161:1:exon
so has part: feature:55374-55438:1:exon
so has part: feature:60382-60434:1:exon
so has part: feature:64146-64199:1:exon
so has part: feature:64281-64340:1:exon
so has part: feature:64813-64856:1:exon
so has part: feature:64949-65082:1:exon
so has part: feature:68789-69077:1:exon
so has part: feature:73627-73675:1:exon
so has part: feature:75354-75437:1:exon
so has part: feature:76852-76931:1:exon
so has part: feature:77120-77209:1:exon
so has part: feature:77708-78133:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24162-24339:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:24963-25018:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:33538-33655:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:33739-33904:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:33993-34019:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:36582-36721:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:46874-46936:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:47043-47161:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:55374-55438:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:60382-60434:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:64146-64199:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:64281-64340:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:64813-64856:1:exon

position:64856:1
position: 64856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:64949-65082:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:68789-69077:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:73627-73675:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:75354-75437:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:76852-76931:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:77120-77209:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:77708-78133:1:exon

LOC100245153
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100245153
product: polycomb group protein EMBRYONIC FLOWER 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 78 samples with support for all annotated introns
transcript id: XM_019216190.1
SIO_010081: LOC100245153
subclass of: SO_0000673
so part of: LOC100245153
location: join(24162..24339,24963..25018,33538..33655,33745..33904,33993..34019,36582..36721,46874..46936,47043..47161,55374..55438,60382..60434,64146..64199,64281..64340,64813..64859,64949..65082,68789..69077,73627..73675,75354..75437,76852..76931,77120..77209,77708..78133)
location: region:24162-78133:1
so has part: feature:24162-24339:1:exon
so has part: feature:24963-25018:1:exon
so has part: feature:33538-33655:1:exon
so has part: feature:33745-33904:1:exon
so has part: feature:33993-34019:1:exon
so has part: feature:36582-36721:1:exon
so has part: feature:46874-46936:1:exon
so has part: feature:47043-47161:1:exon
so has part: feature:55374-55438:1:exon
so has part: feature:60382-60434:1:exon
so has part: feature:64146-64199:1:exon
so has part: feature:64281-64340:1:exon
so has part: feature:64813-64859:1:exon
so has part: feature:64949-65082:1:exon
so has part: feature:68789-69077:1:exon
so has part: feature:73627-73675:1:exon
so has part: feature:75354-75437:1:exon
so has part: feature:76852-76931:1:exon
so has part: feature:77120-77209:1:exon
so has part: feature:77708-78133:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24162-24339:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:24963-25018:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:33538-33655:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:33745-33904:1:exon

position:33745:1
position: 33745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:33993-34019:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:36582-36721:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:46874-46936:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:47043-47161:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:55374-55438:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:60382-60434:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:64146-64199:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:64281-64340:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:64813-64859:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:64949-65082:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:68789-69077:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:73627-73675:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:75354-75437:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:76852-76931:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:77120-77209:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:77708-78133:1:exon

LOC100245153
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100245153
product: polycomb group protein EMBRYONIC FLOWER 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 122 samples with support for all annotated introns
transcript id: XM_019216192.1
SIO_010081: LOC100245153
subclass of: SO_0000673
so part of: LOC100245153
location: join(24163..24339,24963..25018,33538..33655,33739..33904,33993..34019,36582..36721,46874..46936,47043..47161,55374..55438,60382..60434,64146..64199,64281..64340,64813..64859,64949..65082,68807..69077,73627..73675,75354..75437,76852..76931,77120..77209,77708..78133)
location: region:24163-78133:1
so has part: feature:24163-24339:1:exon
so has part: feature:24963-25018:1:exon
so has part: feature:33538-33655:1:exon
so has part: feature:33739-33904:1:exon
so has part: feature:33993-34019:1:exon
so has part: feature:36582-36721:1:exon
so has part: feature:46874-46936:1:exon
so has part: feature:47043-47161:1:exon
so has part: feature:55374-55438:1:exon
so has part: feature:60382-60434:1:exon
so has part: feature:64146-64199:1:exon
so has part: feature:64281-64340:1:exon
so has part: feature:64813-64859:1:exon
so has part: feature:64949-65082:1:exon
so has part: feature:68807-69077:1:exon
so has part: feature:73627-73675:1:exon
so has part: feature:75354-75437:1:exon
so has part: feature:76852-76931:1:exon
so has part: feature:77120-77209:1:exon
so has part: feature:77708-78133:1:exon

position:24163:1
position: 24163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24163-24339:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:24963-25018:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:33538-33655:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:33739-33904:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:33993-34019:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:36582-36721:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:46874-46936:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:47043-47161:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:55374-55438:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:60382-60434:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:64146-64199:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:64281-64340:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:64813-64859:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:64949-65082:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:68807-69077:1:exon

position:68807:1
position: 68807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:73627-73675:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:75354-75437:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:76852-76931:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:77120-77209:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:77708-78133:1:exon

LOC100245153
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100245153
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb group protein EMBRYONIC FLOWER 2 isoform X1
translation: MCHQNSCVHFSAEEAVAAEESLLIYCKPVELYNILQCRALQNPSFLQRCLRYKIQARRKQRLQMTISLSGTIKDGMQAKDLLPVYILMAKPVSDTEVAAGKQHSEVYRLNRACKLSSFTEFEGWRRAEANFILPEMNKLSLDVKAGKLTILLVSCGEARNSFCEANVGGYCLWGKLPMESLYSSLERSASLTLGNRAEMLSNVDMQSCFLEPCFLEEGSCTTFHTPHDLGTMGSQKVQVNIVAQKVGAKEKSPYASYTYRNIPTSSLSNIIRLRAGNVIFNYRDRSDMPQKIEVTENFSCPFCLMQCASFKGLRYHLCSSHDLFNFDFWVTEEYQAVNVSVKVDILRSEIMADGVDPRLQTFFWCSKPHKRRRLKNQVQNANHVFLHFLESGSPNFFSEAHKGFLEKDDDALSCEGEKSSMSLPCQKDLQNARPVAESYAIGKPSAVECIERVASNLNETGVPIAMAQSSVDMECVQSISGSPTPPAVLQFPKTRKLSFERSEPRNRTLLQKRQFFHSHRAQPMALDQVLSDRDSEDEVDDDIADFEDRRMLDDFVDVTKDEKQFMHLWNSFVRKQRVLADGHIPWACEAFSKLHGQELVQAPAIFWCWRLFMIKLWNHGLLDARTMNSCNLVLEGYRNEVSDTMKS
SIO_010081: LOC100245153
subclass of: SO_0000673
so part of: LOC100245153
location: join(24214..24339,24963..25018,33538..33655,33739..33904,33993..34019,36582..36721,46874..46936,47043..47161,55374..55438,60382..60434,64146..64199,64281..64340,64813..64859,64949..65082,68789..69077,73627..73675,75354..75437,76852..76931,77120..77209,77708..77831)
location: region:24214-77831:1
so has part: feature:24214-24339:1:exon
so has part: feature:24963-25018:1:exon
so has part: feature:33538-33655:1:exon
so has part: feature:33739-33904:1:exon
so has part: feature:33993-34019:1:exon
so has part: feature:36582-36721:1:exon
so has part: feature:46874-46936:1:exon
so has part: feature:47043-47161:1:exon
so has part: feature:55374-55438:1:exon
so has part: feature:60382-60434:1:exon
so has part: feature:64146-64199:1:exon
so has part: feature:64281-64340:1:exon
so has part: feature:64813-64859:1:exon
so has part: feature:64949-65082:1:exon
so has part: feature:68789-69077:1:exon
so has part: feature:73627-73675:1:exon
so has part: feature:75354-75437:1:exon
so has part: feature:76852-76931:1:exon
so has part: feature:77120-77209:1:exon
so has part: feature:77708-77831:1:exon

XP_019082292.1
type: Protein
SIO_000068: ncbiprotein

position:24214:1
position: 24214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77831:1
position: 77831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24214-24339:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:24963-25018:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:33538-33655:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:33739-33904:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:33993-34019:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:36582-36721:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:46874-46936:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:47043-47161:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:55374-55438:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:60382-60434:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:64146-64199:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:64281-64340:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:64813-64859:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:64949-65082:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:68789-69077:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:73627-73675:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:75354-75437:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:76852-76931:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:77120-77209:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:77708-77831:1:exon

LOC100245153
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100245153
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb group protein EMBRYONIC FLOWER 2 isoform X1
translation: MCHQNSCVHFSAEEAVAAEESLLIYCKPVELYNILQCRALQNPSFLQRCLRYKIQARRKQRLQMTISLSGTIKDGMQAKDLLPVYILMAKPVSDTEVAAGKQHSEVYRLNRACKLSSFTEFEGWRRAEANFILPEMNKLSLDVKAGKLTILLVSCGEARNSFCEANVGGYCLWGKLPMESLYSSLERSASLTLGNRAEMLSNVDMQSCFLEPCFLEEGSCTTFHTPHDLGTMGSQKVQVNIVAQKVGAKEKSPYASYTYRNIPTSSLSNIIRLRAGNVIFNYRDRSDMPQKIEVTENFSCPFCLMQCASFKGLRYHLCSSHDLFNFDFWVTEEYQAVNVSVKVDILRSEIMADGVDPRLQTFFWCSKPHKRRRLKNQVQNANHVFLHFLESGSPNFFSEAHKGFLEKDDDALSCEGEKSSMSLPCQKDLQNARPVAESYAIGKPSAVECIERVASNLNETGVPIAMAQSSVDMECVQSISGSPTPPAVLQFPKTRKLSFERSEPRNRTLLQKRQFFHSHRAQPMALDQVLSDRDSEDEVDDDIADFEDRRMLDDFVDVTKDEKQFMHLWNSFVRKQRVLADGHIPWACEAFSKLHGQELVQAPAIFWCWRLFMIKLWNHGLLDARTMNSCNLVLEGYRNEVSDTMKS
SIO_010081: LOC100245153
subclass of: SO_0000673
so part of: LOC100245153
location: join(24214..24339,24963..25018,33538..33655,33739..33904,33993..34019,36582..36721,46874..46936,47043..47161,55374..55438,60382..60434,64146..64199,64281..64340,64813..64859,64949..65082,68789..69077,73627..73675,75354..75437,76852..76931,77120..77209,77708..77831)
location: region:24214-77831:1
so has part: feature:24214-24339:1:exon
so has part: feature:24963-25018:1:exon
so has part: feature:33538-33655:1:exon
so has part: feature:33739-33904:1:exon
so has part: feature:33993-34019:1:exon
so has part: feature:36582-36721:1:exon
so has part: feature:46874-46936:1:exon
so has part: feature:47043-47161:1:exon
so has part: feature:55374-55438:1:exon
so has part: feature:60382-60434:1:exon
so has part: feature:64146-64199:1:exon
so has part: feature:64281-64340:1:exon
so has part: feature:64813-64859:1:exon
so has part: feature:64949-65082:1:exon
so has part: feature:68789-69077:1:exon
so has part: feature:73627-73675:1:exon
so has part: feature:75354-75437:1:exon
so has part: feature:76852-76931:1:exon
so has part: feature:77120-77209:1:exon
so has part: feature:77708-77831:1:exon

XP_010657864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24214-24339:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:24963-25018:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:33538-33655:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:33739-33904:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:33993-34019:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:36582-36721:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:46874-46936:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:47043-47161:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:55374-55438:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:60382-60434:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:64146-64199:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:64281-64340:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:64813-64859:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:64949-65082:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:68789-69077:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:73627-73675:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:75354-75437:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:76852-76931:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:77120-77209:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:77708-77831:1:exon

LOC100245153
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100245153
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb group protein EMBRYONIC FLOWER 2 isoform X4
translation: MCHQNSCVHFSAEEAVAAEESLLIYCKPVELYNILQCRALQNPSFLQRCLRYKIQARRKQRLQMTISLSGTIKDGMQAKDLLPVYILMAKPVSDTEVAAGKQHSEVYRLNRACKLSSFTEFEGWRRAEANFILPEMNKLSLDVKAGKLTILLVSCGEARNSFCEANVGGYCLWGKLPMESLYSSLERSASLTLGNRAEMLSNVDMQSCFLEPCFLEEGSCTTFHTPHDLGTMGSQKVQVNIVAQKVGAKEKSPYASYTYRNIPTSSLSNIIRLRAGNVIFNYRDRSDMPQKIEVTENFSCPFCLMQCASFKGLRYHLCSSHDLFNFDFWVTEEYQAVNVSVKVDILRSEIMADGVDPRLQTFFWCSKPHKRRRLKNQVQNANHVFLHFLESGSPNFFSEAHKGFLEKDDGEKSSMSLPCQKDLQNARPVAESYAIGKPSAVECIERVASNLNETGVPIAMAQSSVDMECVQSISGSPTPPAVLQFPKTRKLSFERSEPRNRTLLQKRQFFHSHRAQPMALDQVLSDRDSEDEVDDDIADFEDRRMLDDFVDVTKDEKQFMHLWNSFVRKQRVLADGHIPWACEAFSKLHGQELVQAPAIFWCWRLFMIKLWNHGLLDARTMNSCNLVLEGYRNEVSDTMKS
SIO_010081: LOC100245153
subclass of: SO_0000673
so part of: LOC100245153
location: join(24214..24339,24963..25018,33538..33655,33739..33904,33993..34019,36582..36721,46874..46936,47043..47161,55374..55438,60382..60434,64146..64199,64281..64340,64813..64859,64949..65082,68807..69077,73627..73675,75354..75437,76852..76931,77120..77209,77708..77831)
location: region:24214-77831:1
so has part: feature:24214-24339:1:exon
so has part: feature:24963-25018:1:exon
so has part: feature:33538-33655:1:exon
so has part: feature:33739-33904:1:exon
so has part: feature:33993-34019:1:exon
so has part: feature:36582-36721:1:exon
so has part: feature:46874-46936:1:exon
so has part: feature:47043-47161:1:exon
so has part: feature:55374-55438:1:exon
so has part: feature:60382-60434:1:exon
so has part: feature:64146-64199:1:exon
so has part: feature:64281-64340:1:exon
so has part: feature:64813-64859:1:exon
so has part: feature:64949-65082:1:exon
so has part: feature:68807-69077:1:exon
so has part: feature:73627-73675:1:exon
so has part: feature:75354-75437:1:exon
so has part: feature:76852-76931:1:exon
so has part: feature:77120-77209:1:exon
so has part: feature:77708-77831:1:exon

XP_019071737.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24214-24339:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:24963-25018:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:33538-33655:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:33739-33904:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:33993-34019:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:36582-36721:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:46874-46936:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:47043-47161:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:55374-55438:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:60382-60434:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:64146-64199:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:64281-64340:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:64813-64859:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:64949-65082:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:68807-69077:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:73627-73675:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:75354-75437:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:76852-76931:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:77120-77209:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:77708-77831:1:exon

LOC100245153
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100245153
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb group protein EMBRYONIC FLOWER 2 isoform X2
translation: MCHQNSCVHFSAEEAVAAEESLLIYCKPVELYNILQCRALQNPSFLQRCLRYKIQARRKQRLQMTISLSGTIKDGMQAKDLLPVYILMAKPVSDTEVAAGKQHSEVYRLNRACKLSSFTEFEGWRRAEANFILPEMNKLSLDVKAGKLTILLVSCGEARNSFCEANVGGYCLWGKLPMESLYSSLERSASLTLGNRAEMLSNVDMQSCFLEPCFLEEGSCTTFHTPHDLGTMGSQKVQVNIVAQKVGAKEKSPYASYTYRNIPTSSLSNIIRLRAGNVIFNYRDRSDMPQKIEVTENFSCPFCLMQCASFKGLRYHLCSSHDLFNFDFWVTEEYQAVNVSVKVDILRSEIMADGVDPRLQTFFCSKPHKRRRLKNQVQNANHVFLHFLESGSPNFFSEAHKGFLEKDDDALSCEGEKSSMSLPCQKDLQNARPVAESYAIGKPSAVECIERVASNLNETGVPIAMAQSSVDMECVQSISGSPTPPAVLQFPKTRKLSFERSEPRNRTLLQKRQFFHSHRAQPMALDQVLSDRDSEDEVDDDIADFEDRRMLDDFVDVTKDEKQFMHLWNSFVRKQRVLADGHIPWACEAFSKLHGQELVQAPAIFWCWRLFMIKLWNHGLLDARTMNSCNLVLEGYRNEVSDTMKS
SIO_010081: LOC100245153
subclass of: SO_0000673
so part of: LOC100245153
location: join(24214..24339,24963..25018,33538..33655,33739..33904,33993..34019,36582..36721,46874..46936,47043..47161,55374..55438,60382..60434,64146..64199,64281..64340,64813..64856,64949..65082,68789..69077,73627..73675,75354..75437,76852..76931,77120..77209,77708..77831)
location: region:24214-77831:1
so has part: feature:24214-24339:1:exon
so has part: feature:24963-25018:1:exon
so has part: feature:33538-33655:1:exon
so has part: feature:33739-33904:1:exon
so has part: feature:33993-34019:1:exon
so has part: feature:36582-36721:1:exon
so has part: feature:46874-46936:1:exon
so has part: feature:47043-47161:1:exon
so has part: feature:55374-55438:1:exon
so has part: feature:60382-60434:1:exon
so has part: feature:64146-64199:1:exon
so has part: feature:64281-64340:1:exon
so has part: feature:64813-64856:1:exon
so has part: feature:64949-65082:1:exon
so has part: feature:68789-69077:1:exon
so has part: feature:73627-73675:1:exon
so has part: feature:75354-75437:1:exon
so has part: feature:76852-76931:1:exon
so has part: feature:77120-77209:1:exon
so has part: feature:77708-77831:1:exon

XP_019071733.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24214-24339:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:24963-25018:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:33538-33655:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:33739-33904:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:33993-34019:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:36582-36721:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:46874-46936:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:47043-47161:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:55374-55438:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:60382-60434:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:64146-64199:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:64281-64340:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:64813-64856:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:64949-65082:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:68789-69077:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:73627-73675:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:75354-75437:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:76852-76931:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:77120-77209:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:77708-77831:1:exon

LOC100245153
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100245153
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb group protein EMBRYONIC FLOWER 2 isoform X3
translation: MCHQNSCVHFSAEEAVAAEESLLIYCKPVELYNILQCRALQNPSFLQRCLRYKIQARRKQRLQMTISLSGTIKDGMQAKDLLPVYILMAKPVSDTEVAAGHSEVYRLNRACKLSSFTEFEGWRRAEANFILPEMNKLSLDVKAGKLTILLVSCGEARNSFCEANVGGYCLWGKLPMESLYSSLERSASLTLGNRAEMLSNVDMQSCFLEPCFLEEGSCTTFHTPHDLGTMGSQKVQVNIVAQKVGAKEKSPYASYTYRNIPTSSLSNIIRLRAGNVIFNYRDRSDMPQKIEVTENFSCPFCLMQCASFKGLRYHLCSSHDLFNFDFWVTEEYQAVNVSVKVDILRSEIMADGVDPRLQTFFWCSKPHKRRRLKNQVQNANHVFLHFLESGSPNFFSEAHKGFLEKDDDALSCEGEKSSMSLPCQKDLQNARPVAESYAIGKPSAVECIERVASNLNETGVPIAMAQSSVDMECVQSISGSPTPPAVLQFPKTRKLSFERSEPRNRTLLQKRQFFHSHRAQPMALDQVLSDRDSEDEVDDDIADFEDRRMLDDFVDVTKDEKQFMHLWNSFVRKQRVLADGHIPWACEAFSKLHGQELVQAPAIFWCWRLFMIKLWNHGLLDARTMNSCNLVLEGYRNEVSDTMKS
SIO_010081: LOC100245153
subclass of: SO_0000673
so part of: LOC100245153
location: join(24214..24339,24963..25018,33538..33655,33745..33904,33993..34019,36582..36721,46874..46936,47043..47161,55374..55438,60382..60434,64146..64199,64281..64340,64813..64859,64949..65082,68789..69077,73627..73675,75354..75437,76852..76931,77120..77209,77708..77831)
location: region:24214-77831:1
so has part: feature:24214-24339:1:exon
so has part: feature:24963-25018:1:exon
so has part: feature:33538-33655:1:exon
so has part: feature:33745-33904:1:exon
so has part: feature:33993-34019:1:exon
so has part: feature:36582-36721:1:exon
so has part: feature:46874-46936:1:exon
so has part: feature:47043-47161:1:exon
so has part: feature:55374-55438:1:exon
so has part: feature:60382-60434:1:exon
so has part: feature:64146-64199:1:exon
so has part: feature:64281-64340:1:exon
so has part: feature:64813-64859:1:exon
so has part: feature:64949-65082:1:exon
so has part: feature:68789-69077:1:exon
so has part: feature:73627-73675:1:exon
so has part: feature:75354-75437:1:exon
so has part: feature:76852-76931:1:exon
so has part: feature:77120-77209:1:exon
so has part: feature:77708-77831:1:exon

XP_019071735.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24214-24339:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:24963-25018:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:33538-33655:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:33745-33904:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:33993-34019:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:36582-36721:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:46874-46936:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:47043-47161:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:55374-55438:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:60382-60434:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:64146-64199:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:64281-64340:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:64813-64859:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:64949-65082:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:68789-69077:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:73627-73675:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:75354-75437:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:76852-76931:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:77120-77209:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:77708-77831:1:exon

LOC104881044
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC104881044
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(78856..81747)
location: region:78856-81747:-1
so has part: feature:78856-81747:-1:exon
subclass of: SO_0000010

104881044
type: Gene
SIO_000068: ncbigene

position:78856:-1
position: 78856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81747:-1
position: 81747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78856-81747:-1:exon

LOC104881044
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104881044
product: increased DNA methylation 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019226082.1
SIO_010081: LOC104881044
subclass of: SO_0000673
so part of: LOC104881044
location: complement(join(78856..78944,79032..79242,79721..79820,79913..79999,80158..80396,80490..80590,80678..80783,80872..81747))
location: region:78856-81747:-1
so has part: feature:80872-81747:-1:exon
so has part: feature:80678-80783:-1:exon
so has part: feature:80490-80590:-1:exon
so has part: feature:80158-80396:-1:exon
so has part: feature:79913-79999:-1:exon
so has part: feature:79721-79820:-1:exon
so has part: feature:79032-79242:-1:exon
so has part: feature:78856-78944:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:80872-81747:-1:exon

position:80872:-1
position: 80872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:80678-80783:-1:exon

position:80678:-1
position: 80678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80783:-1
position: 80783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:80490-80590:-1:exon

position:80490:-1
position: 80490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80590:-1
position: 80590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:80158-80396:-1:exon

position:80158:-1
position: 80158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80396:-1
position: 80396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:79913-79999:-1:exon

position:79913:-1
position: 79913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79999:-1
position: 79999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:79721-79820:-1:exon

position:79721:-1
position: 79721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79820:-1
position: 79820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:79032-79242:-1:exon

position:79032:-1
position: 79032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79242:-1
position: 79242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:78856-78944:-1:exon

position:78944:-1
position: 78944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104881044
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104881044
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: increased DNA methylation 1
translation: MPDNSVKGKNKRRVFYSPPSSSSSSDSSDDRKVDSNNSDPRFGLGRPQRRKSRYEYDPSYPEPRPRRTLRPTFGNGINIREDGVPPTEVGCSAGTEFTTQREQRPRGRANVRRGGGRGPSGSLPERTRRRRQRTHYSTRSSSKVDSESPSQKRTILSWLIDSRVVENNAKIVYKNEAGEQILQGVLTGDGIWCSCCNTVITVSEFQLHAGDEPNRPYQRIFISETGLSLLTCQAEAWNQQGIPELQGYHLIEPREDVSDKYDDACVVCADGGNLICCDKCPSTYHISCLQMEDEPQGEWRCPACACKFCHTHAFDISVFTCSQCDKKYHWECFRENEGMLIDLNMDGPSTSTPFCSSICSQIYEKLERLVGVRNELDEGLTWTLLRRMDPEAGVYLEESYDRTLCNSKIAVAVAVMEECFEPVIDRHTQINVVRSVIYNCGANFPRISFEGFYTAILEKGDETISVASMRIHGNKLAEMPFIATRPSYRRQGMCHKLLVAIESTLCFLQVQYLVIPSIEQRVRRWEESYGFQAIENKVMGELIKVKSLMFHCAIRLQKPLLVHETAANEVGNGDAGNADKAHESGSDDGSTDMGSFDLNLSL
SIO_010081: LOC104881044
subclass of: SO_0000673
so part of: LOC104881044
location: complement(join(78856..78944,79032..79242,79721..79820,79913..79999,80158..80396,80490..80590,80678..80783,80872..81747))
location: region:78856-81747:-1
so has part: feature:80872-81747:-1:exon
so has part: feature:80678-80783:-1:exon
so has part: feature:80490-80590:-1:exon
so has part: feature:80158-80396:-1:exon
so has part: feature:79913-79999:-1:exon
so has part: feature:79721-79820:-1:exon
so has part: feature:79032-79242:-1:exon
so has part: feature:78856-78944:-1:exon

XP_019081627.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80872-81747:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:80678-80783:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80490-80590:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:80158-80396:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:79913-79999:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:79721-79820:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:79032-79242:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:78856-78944:-1:exon

LOC104881023
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC104881023
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 94917..97232
location: region:94917-97232:1
so has part: feature:94917-97232:1:exon
subclass of: SO_0000010

104881023
type: Gene
SIO_000068: ncbigene

position:94917:1
position: 94917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97232:1
position: 97232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94917-97232:1:exon

LOC104881023
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104881023
product: uncharacterized LOC104881023
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_010659582.2
SIO_010081: LOC104881023
subclass of: SO_0000673
so part of: LOC104881023
location: join(94917..94967,95130..95166,95784..96058,96333..97232)
location: region:94917-97232:1
so has part: feature:94917-94967:1:exon
so has part: feature:95130-95166:1:exon
so has part: feature:95784-96058:1:exon
so has part: feature:96333-97232:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:94917-94967:1:exon

position:94967:1
position: 94967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:95130-95166:1:exon

position:95130:1
position: 95130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95166:1
position: 95166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:95784-96058:1:exon

position:95784:1
position: 95784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96058:1
position: 96058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:96333-97232:1:exon

position:96333:1
position: 96333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104881023
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104881023
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC104881023
translation: MPQEEDNFDSQVLGSSFSLSLPSEPPDIRNWFSSYEYESPASDTLNDFGCSSFKGSQCEKEELDTEESNRVKDENLGEFMNTELIDELASGEKTGPNAFVECKRDDKLENPYVNERNHDNEGNKDRYGWNDLCSGKISDQGWADSTLQNHDTEPTKNVKQSSRNNEDSLPELEGKFSLKCSKTNKGIGKNGRRSPIKLVQRKGFIQRNSEANSPTKGVGPVSSECASDRIVVNGDSRKKTSLVSNDKENGGKELAENGFVSTRKNRCRGENDHNHLNKPQEFQLVSSRNTGMVLSTGEKNVGERRKVLSEKTNLQHSDVTEIAGKWKCPQKSKPDLGPPLKQLRLEQWVHRL
SIO_010081: LOC104881023
subclass of: SO_0000673
so part of: LOC104881023
location: join(94935..94967,95130..95166,95784..96058,96333..97046)
location: region:94935-97046:1
so has part: feature:94935-94967:1:exon
so has part: feature:95130-95166:1:exon
so has part: feature:95784-96058:1:exon
so has part: feature:96333-97046:1:exon

XP_010657884.1
type: Protein
SIO_000068: ncbiprotein

position:94935:1
position: 94935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97046:1
position: 97046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94935-94967:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:95130-95166:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:95784-96058:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:96333-97046:1:exon

LOC100259474
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100259474
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 98637..103639
location: region:98637-103639:1
so has part: feature:98637-103639:1:exon
subclass of: SO_0000010

100259474
type: Gene
SIO_000068: ncbigene

position:98637:1
position: 98637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103639:1
position: 103639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98637-103639:1:exon

LOC100259474
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100259474
product: probable enoyl-CoA hydratase 2, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 186 samples with support for all annotated introns
transcript id: XM_010659592.2
SIO_010081: LOC100259474
subclass of: SO_0000673
so part of: LOC100259474
location: join(98637..98954,99042..99211,100416..100490,101608..101698,101810..101861,102152..102255,102324..102400,103286..103639)
location: region:98637-103639:1
so has part: feature:98637-98954:1:exon
so has part: feature:99042-99211:1:exon
so has part: feature:100416-100490:1:exon
so has part: feature:101608-101698:1:exon
so has part: feature:101810-101861:1:exon
so has part: feature:102152-102255:1:exon
so has part: feature:102324-102400:1:exon
so has part: feature:103286-103639:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:98637-98954:1:exon

position:98954:1
position: 98954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:99042-99211:1:exon

position:99042:1
position: 99042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99211:1
position: 99211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:100416-100490:1:exon

position:100416:1
position: 100416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100490:1
position: 100490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:101608-101698:1:exon

position:101608:1
position: 101608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101698:1
position: 101698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:101810-101861:1:exon

position:101810:1
position: 101810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101861:1
position: 101861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:102152-102255:1:exon

position:102152:1
position: 102152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102255:1
position: 102255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:102324-102400:1:exon

position:102324:1
position: 102324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102400:1
position: 102400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:103286-103639:1:exon

position:103286:1
position: 103286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100259474
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100259474
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable enoyl-CoA hydratase 2, mitochondrial
translation: MGVFAISLYHHCRRNFSFNYHYQSCRTLILQSAFESVRVQRLSHDDSGIVEVHLDRPEAKNAIGKEMLGGLQNIFEAINRDASANVVMLSSSVPRVFCAGADLKERKTMNPSETRFFVNSLRSTFSLLEALHVPTIAVIEGAALGGGLEMALSCDLRICGEDAVLGLPETGLAIIPGAGGTQRLSRLVGKSIAKELIFTGRKVGGRDAMSVGLVNYCVPAGEAHLKALEIAQHINQKGPLALQMAKRAINEGLELDMESALALEEECYEQLLNTKDRLEGLAAFSEKRKPRYNGE
SIO_010081: LOC100259474
subclass of: SO_0000673
so part of: LOC100259474
location: join(98813..98954,99042..99211,100416..100490,101608..101698,101810..101861,102152..102255,102324..102400,103286..103462)
location: region:98813-103462:1
so has part: feature:98813-98954:1:exon
so has part: feature:99042-99211:1:exon
so has part: feature:100416-100490:1:exon
so has part: feature:101608-101698:1:exon
so has part: feature:101810-101861:1:exon
so has part: feature:102152-102255:1:exon
so has part: feature:102324-102400:1:exon
so has part: feature:103286-103462:1:exon

XP_010657894.1
type: Protein
SIO_000068: ncbiprotein

position:98813:1
position: 98813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103462:1
position: 103462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98813-98954:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:99042-99211:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:100416-100490:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:101608-101698:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:101810-101861:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:102152-102255:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102324-102400:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:103286-103462:1:exon

LOC104881027
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC104881027
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 110088..111017
location: region:110088-111017:1
so has part: feature:110088-111017:1:exon
subclass of: SO_0000010

104881027
type: Gene
SIO_000068: ncbigene

position:110088:1
position: 110088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111017:1
position: 111017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110088-111017:1:exon

LOC104881027
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104881027
product: AP2/ERF and B3 domain-containing transcription factor At1g51120-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_019226086.1
SIO_010081: LOC104881027
subclass of: SO_0000673
so part of: LOC104881027
location: 110088..111017
location: region:110088-111017:1
so has part: feature:110088-111017:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110088-111017:1:exon

LOC104881027
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104881027
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP2/ERF and B3 domain-containing transcription factor At1g51120-like
translation: MELEMDSTISYSRAGMVAERSFSSNSFSLSQPNDHRSSRFRGVVLLHSGNWGARISIQYQLVWLGTFPTAEEAARAYDTAALKLHKGDSFLNFPWSDHSPQEIMFQSYYSIGEIFKMIKDKSYSSNLATFIADQSLIMNYASDQMYEQGISYQLLFKKALTPRDVAKHPRLLIPKEYALMYFPPITGDVESVQLMFYDKDGIPWTFRYSCWESNQSFVFTTGWKQFVNAKRLKRGETISFYRCGIEEEFEDSAFFMIDVDRGDWESDAIGEHMGEEISVGGNSNNGMDADDKEKEAADKGFVLFGVKLG
SIO_010081: LOC104881027
subclass of: SO_0000673
so part of: LOC104881027
location: 110088..111017
location: region:110088-111017:1
so has part: feature:110088-111017:1:exon

XP_019081631.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110088-111017:1:exon

LOC100251690
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100251690
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(116866..118775)
location: region:116866-118775:-1
so has part: feature:116866-118775:-1:exon
subclass of: SO_0000010

100251690
type: Gene
SIO_000068: ncbigene

position:116866:-1
position: 116866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118775:-1
position: 118775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116866-118775:-1:exon

LOC100251690
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100251690
product: 1-aminocyclopropane-1-carboxylate synthase 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_002271019.4
SIO_010081: LOC100251690
subclass of: SO_0000673
so part of: LOC100251690
location: complement(join(116866..118091,118192..118352,118429..118557,118641..118775))
location: region:116866-118775:-1
so has part: feature:118641-118775:-1:exon
so has part: feature:118429-118557:-1:exon
so has part: feature:118192-118352:-1:exon
so has part: feature:116866-118091:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:118641-118775:-1:exon

position:118641:-1
position: 118641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:118429-118557:-1:exon

position:118429:-1
position: 118429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118557:-1
position: 118557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:118192-118352:-1:exon

position:118192:-1
position: 118192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118352:-1
position: 118352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:116866-118091:-1:exon

position:118091:-1
position: 118091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100251690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100251690
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-aminocyclopropane-1-carboxylate synthase 7
translation: MADRHGEDSPYFAGWKAYDLNPYDLLYNPSGIIQMGLAENQVGTDLLEEWLEKHSDIPTWKGTLTSFKQTALYQDYHGLANFRKALANFMAEVRGRRVKIDPDMIVLTAGATAGNEILTFCIADPGEALLVPTPYYPGFDRDLRWRTGVDIIPVKCYSYNNFEVTLPALEKAYQEGLSKKQSIKAILITNPSNPLGLTISPQTLTMILDFAAEKSIHVISDEVYAGTVFSSQPFTSILEIVQSSNKYDPETVHVVYSLSKDLGLPGFRIGAIYSSNPRIITASRRMSSFSLISSQTQVLLKCLLSDSGFIAEYLATIKERLKRRHGEFKRGLKEIGIDSLEGNAGLFSWVNLRNLLVCDNWDGEMKLWRVILEEIGLNVSPGCSFHCEEPGWFRVCYGNMSEDEMNVALGRIKAFMSAGRAQEIAVLSMGKTDALAAAEGSSGVAAAACTSLGLDAGDLQPEPLAH
SIO_010081: LOC100251690
subclass of: SO_0000673
so part of: LOC100251690
location: complement(join(117104..118091,118192..118352,118429..118557,118641..118763))
location: region:117104-118763:-1
so has part: feature:118641-118763:-1:exon
so has part: feature:118429-118557:-1:exon
so has part: feature:118192-118352:-1:exon
so has part: feature:117104-118091:-1:exon

XP_002271055.3
type: Protein
SIO_000068: ncbiprotein

position:117104:-1
position: 117104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118763:-1
position: 118763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118641-118763:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:118429-118557:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:118192-118352:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:117104-118091:-1:exon

LOC100244786
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100244786
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 125065..140233
location: region:125065-140233:1
so has part: feature:125065-140233:1:exon
subclass of: SO_0000010

100244786
type: Gene
SIO_000068: ncbigene

position:125065:1
position: 125065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140233:1
position: 140233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125065-140233:1:exon

LOC100244786
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100244786
product: ubiquitin carboxyl-terminal hydrolase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 245 samples with support for all annotated introns
transcript id: XM_002273548.4
SIO_010081: LOC100244786
subclass of: SO_0000673
so part of: LOC100244786
location: join(125065..125208,126017..126148,126288..126326,129024..129129,132663..132721,132836..132910,138920..138968,139102..139178,139763..140233)
location: region:125065-140233:1
so has part: feature:125065-125208:1:exon
so has part: feature:126017-126148:1:exon
so has part: feature:126288-126326:1:exon
so has part: feature:129024-129129:1:exon
so has part: feature:132663-132721:1:exon
so has part: feature:132836-132910:1:exon
so has part: feature:138920-138968:1:exon
so has part: feature:139102-139178:1:exon
so has part: feature:139763-140233:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:125065-125208:1:exon

position:125208:1
position: 125208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:126017-126148:1:exon

position:126017:1
position: 126017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126148:1
position: 126148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:126288-126326:1:exon

position:126288:1
position: 126288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126326:1
position: 126326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:129024-129129:1:exon

position:129024:1
position: 129024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129129:1
position: 129129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:132663-132721:1:exon

position:132663:1
position: 132663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132721:1
position: 132721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:132836-132910:1:exon

position:132836:1
position: 132836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132910:1
position: 132910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:138920-138968:1:exon

position:138920:1
position: 138920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138968:1
position: 138968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:139102-139178:1:exon

position:139102:1
position: 139102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139178:1
position: 139178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:139763-140233:1:exon

position:139763:1
position: 139763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100244786
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100244786
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 3
translation: MATPDESSSAKKWLPLEANPDVMNQFLWGLGLLEDEAECYDVYGLDEELLAIVPKPVLAVLFLYPITTQSEEERILQDSTKRETSNKVYFMRQTVGNACGTIGLLHAIGNVTSEIKLVEGSFLNRFFKSTASMDPLERAAYLENDQEMEVSHSVAATAGDTEASTNADAHFICFSCVDGELYELDGRKSGAVSHGPSSPSTLLQDAAKVIQGIIQKNPDSINFNVIAISKKLEGPY
SIO_010081: LOC100244786
subclass of: SO_0000673
so part of: LOC100244786
location: join(125134..125208,126017..126148,126288..126326,129024..129129,132663..132721,132836..132910,138920..138968,139102..139178,139763..139861)
location: region:125134-139861:1
so has part: feature:125134-125208:1:exon
so has part: feature:126017-126148:1:exon
so has part: feature:126288-126326:1:exon
so has part: feature:129024-129129:1:exon
so has part: feature:132663-132721:1:exon
so has part: feature:132836-132910:1:exon
so has part: feature:138920-138968:1:exon
so has part: feature:139102-139178:1:exon
so has part: feature:139763-139861:1:exon

XP_002273584.1
type: Protein
SIO_000068: ncbiprotein

position:125134:1
position: 125134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139861:1
position: 139861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125134-125208:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126017-126148:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126288-126326:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:129024-129129:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132663-132721:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:132836-132910:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:138920-138968:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:139102-139178:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:139763-139861:1:exon

LOC109121564
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC109121564
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 130642..132341
location: region:130642-132341:1
so has part: feature:130642-132341:1:exon
subclass of: SO_0000011

109121564
type: Gene
SIO_000068: ncbigene

position:130642:1
position: 130642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132341:1
position: 132341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130642-132341:1:exon

LOC109121564
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 29760
nc RNA class: lncRNA
gene: LOC109121564
product: uncharacterized LOC109121564
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XR_002028801.1
SIO_010081: LOC109121564
subclass of: SO_0000673
so part of: LOC109121564
location: join(130642..131715,131824..132341)
location: region:130642-132341:1
so has part: feature:130642-131715:1:exon
so has part: feature:131824-132341:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:130642-131715:1:exon

position:131715:1
position: 131715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:131824-132341:1:exon

position:131824:1
position: 131824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100854621
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100854621
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(140378..141445)
location: region:140378-141445:-1
so has part: feature:140378-141445:-1:exon
subclass of: SO_0000010

100854621
type: Gene
SIO_000068: ncbigene

position:140378:-1
position: 140378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141445:-1
position: 141445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140378-141445:-1:exon

LOC100854621
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100854621
product: oleosin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 13 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_003631322.3
SIO_010081: LOC100854621
subclass of: SO_0000673
so part of: LOC100854621
location: complement(140378..141445)
location: region:140378-141445:-1
so has part: feature:140378-141445:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:140378-141445:-1:exon

LOC100854621
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100854621
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oleosin 1
translation: MAHQDQPQKTQLSYQLIKTSTAATIGGSCMVLSGLTLAGTVIALVVATPLLVIFSPVLVPAAITVFLAASGLVASGGFGVSAVSVFLWLYKYVRGQHPVGADRLDRARDKLTGKAMEVKERAAEQIGTRGTQG
SIO_010081: LOC100854621
subclass of: SO_0000673
so part of: LOC100854621
location: complement(140610..141011)
location: region:140610-141011:-1
so has part: feature:140610-141011:-1:exon

XP_003631370.1
type: Protein
SIO_000068: ncbiprotein

position:140610:-1
position: 140610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141011:-1
position: 141011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140610-141011:-1:exon

LOC100241435
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100241435
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 142377..176185
location: region:142377-176185:1
so has part: feature:142377-176185:1:exon
subclass of: SO_0000010

100241435
type: Gene
SIO_000068: ncbigene

position:142377:1
position: 142377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176185:1
position: 176185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142377-176185:1:exon

LOC100241435
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100241435
product: COP9 signalosome complex subunit 7, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_010659639.2
SIO_010081: LOC100241435
subclass of: SO_0000673
so part of: LOC100241435
location: join(142377..142586,143793..143868,154300..154388,155402..155491,163069..163113,163207..163277,171508..171646,175046..175140,175800..176185)
location: region:142377-176185:1
so has part: feature:142377-142586:1:exon
so has part: feature:143793-143868:1:exon
so has part: feature:154300-154388:1:exon
so has part: feature:155402-155491:1:exon
so has part: feature:163069-163113:1:exon
so has part: feature:163207-163277:1:exon
so has part: feature:171508-171646:1:exon
so has part: feature:175046-175140:1:exon
so has part: feature:175800-176185:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:142377-142586:1:exon

position:142586:1
position: 142586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:143793-143868:1:exon

position:143793:1
position: 143793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143868:1
position: 143868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:154300-154388:1:exon

position:154300:1
position: 154300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154388:1
position: 154388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:155402-155491:1:exon

position:155402:1
position: 155402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155491:1
position: 155491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:163069-163113:1:exon

position:163069:1
position: 163069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163113:1
position: 163113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:163207-163277:1:exon

position:163207:1
position: 163207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163277:1
position: 163277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:171508-171646:1:exon

position:171508:1
position: 171508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171646:1
position: 171646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:175046-175140:1:exon

position:175046:1
position: 175046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175140:1
position: 175140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:175800-176185:1:exon

position:175800:1
position: 175800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100241435
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100241435
product: COP9 signalosome complex subunit 7, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_010659655.2
SIO_010081: LOC100241435
subclass of: SO_0000673
so part of: LOC100241435
location: join(142377..142586,143793..143868,154300..154388,155402..155491,163069..163113,163207..163277,171508..171646,175800..176185)
location: region:142377-176185:1
so has part: feature:142377-142586:1:exon
so has part: feature:143793-143868:1:exon
so has part: feature:154300-154388:1:exon
so has part: feature:155402-155491:1:exon
so has part: feature:163069-163113:1:exon
so has part: feature:163207-163277:1:exon
so has part: feature:171508-171646:1:exon
so has part: feature:175800-176185:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:142377-142586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143793-143868:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:154300-154388:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:155402-155491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:163069-163113:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:163207-163277:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:171508-171646:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:175800-176185:1:exon

LOC100241435
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100241435
product: COP9 signalosome complex subunit 7, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_010659647.2
SIO_010081: LOC100241435
subclass of: SO_0000673
so part of: LOC100241435
location: join(142377..142586,143793..143868,154300..154388,155402..155491,163069..163113,163207..163277,171508..171646,175029..175140,175800..175911)
location: region:142377-175911:1
so has part: feature:142377-142586:1:exon
so has part: feature:143793-143868:1:exon
so has part: feature:154300-154388:1:exon
so has part: feature:155402-155491:1:exon
so has part: feature:163069-163113:1:exon
so has part: feature:163207-163277:1:exon
so has part: feature:171508-171646:1:exon
so has part: feature:175029-175140:1:exon
so has part: feature:175800-175911:1:exon

position:175911:1
position: 175911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142377-142586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143793-143868:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:154300-154388:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:155402-155491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:163069-163113:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:163207-163277:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:171508-171646:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:175029-175140:1:exon

position:175029:1
position: 175029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:175800-175911:1:exon

LOC100241435
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100241435
product: COP9 signalosome complex subunit 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_010659619.2
SIO_010081: LOC100241435
subclass of: SO_0000673
so part of: LOC100241435
location: join(142377..142586,143793..143868,154300..154388,155402..155491,163069..163113,163207..163277,171508..171646,175046..175537)
location: region:142377-175537:1
so has part: feature:142377-142586:1:exon
so has part: feature:143793-143868:1:exon
so has part: feature:154300-154388:1:exon
so has part: feature:155402-155491:1:exon
so has part: feature:163069-163113:1:exon
so has part: feature:163207-163277:1:exon
so has part: feature:171508-171646:1:exon
so has part: feature:175046-175537:1:exon

position:175537:1
position: 175537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142377-142586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143793-143868:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:154300-154388:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:155402-155491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:163069-163113:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:163207-163277:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:171508-171646:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:175046-175537:1:exon

LOC100241435
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100241435
product: COP9 signalosome complex subunit 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 84 samples with support for all annotated introns
transcript id: XM_003631323.3
SIO_010081: LOC100241435
subclass of: SO_0000673
so part of: LOC100241435
location: join(142377..142586,143793..143868,154300..154388,155402..155491,163069..163113,163207..163277,171508..171646,175049..175537)
location: region:142377-175537:1
so has part: feature:142377-142586:1:exon
so has part: feature:143793-143868:1:exon
so has part: feature:154300-154388:1:exon
so has part: feature:155402-155491:1:exon
so has part: feature:163069-163113:1:exon
so has part: feature:163207-163277:1:exon
so has part: feature:171508-171646:1:exon
so has part: feature:175049-175537:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:142377-142586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143793-143868:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:154300-154388:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:155402-155491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:163069-163113:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:163207-163277:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:171508-171646:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:175049-175537:1:exon

position:175049:1
position: 175049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100241435
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100241435
product: COP9 signalosome complex subunit 7, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_010659631.2
SIO_010081: LOC100241435
subclass of: SO_0000673
so part of: LOC100241435
location: join(142377..142586,143793..143868,154300..154388,155402..155491,163207..163277,171508..171646,175046..175537)
location: region:142377-175537:1
so has part: feature:142377-142586:1:exon
so has part: feature:143793-143868:1:exon
so has part: feature:154300-154388:1:exon
so has part: feature:155402-155491:1:exon
so has part: feature:163207-163277:1:exon
so has part: feature:171508-171646:1:exon
so has part: feature:175046-175537:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:142377-142586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143793-143868:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:154300-154388:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:155402-155491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:163207-163277:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:171508-171646:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:175046-175537:1:exon

LOC100241435
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100241435
product: COP9 signalosome complex subunit 7, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XM_019216212.1
SIO_010081: LOC100241435
subclass of: SO_0000673
so part of: LOC100241435
location: join(142378..142586,143793..143868,154300..154388,155402..155491,163069..163113,163207..163277,171508..171646,175049..175140,175800..176185)
location: region:142378-176185:1
so has part: feature:142378-142586:1:exon
so has part: feature:143793-143868:1:exon
so has part: feature:154300-154388:1:exon
so has part: feature:155402-155491:1:exon
so has part: feature:163069-163113:1:exon
so has part: feature:163207-163277:1:exon
so has part: feature:171508-171646:1:exon
so has part: feature:175049-175140:1:exon
so has part: feature:175800-176185:1:exon

position:142378:1
position: 142378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142378-142586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143793-143868:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:154300-154388:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:155402-155491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:163069-163113:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:163207-163277:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:171508-171646:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:175049-175140:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:175800-176185:1:exon

LOC100241435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100241435
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COP9 signalosome complex subunit 7 isoform X7
translation: MGAEQRETQAIEQFVKRASDLEGSSLVDFIIQATSHSSLFAFSEILAVPSVVELHGTQYSVYIDLLRLFAHGTWRDYKSNAGFLPELVPDQVLKLKQLSILTLAEKNKVLSYYQLMQELDISNVRELEDFLINECINAGIVRGKLNQLQKCFEVQFAAGRDLRPGTLVSLIQTLTNWLSTSDKMLLTIKEMIDQADRMKELDMEHQKEVEEKIELAKKFLQNKEANINIETRCGGILLV
SIO_010081: LOC100241435
subclass of: SO_0000673
so part of: LOC100241435
location: join(142428..142586,143793..143868,154300..154388,155402..155491,163069..163113,163207..163277,171508..171646,175800..175850)
location: region:142428-175850:1
so has part: feature:142428-142586:1:exon
so has part: feature:143793-143868:1:exon
so has part: feature:154300-154388:1:exon
so has part: feature:155402-155491:1:exon
so has part: feature:163069-163113:1:exon
so has part: feature:163207-163277:1:exon
so has part: feature:171508-171646:1:exon
so has part: feature:175800-175850:1:exon

XP_010657957.1
type: Protein
SIO_000068: ncbiprotein

position:142428:1
position: 142428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175850:1
position: 175850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142428-142586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143793-143868:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:154300-154388:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:155402-155491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:163069-163113:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:163207-163277:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:171508-171646:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:175800-175850:1:exon

LOC100241435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100241435
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COP9 signalosome complex subunit 7 isoform X4
translation: MGAEQRETQAIEQFVKRASDLEGSSLVDFIIQATSHSSLFAFSEILAVPSVVELHGTQYSVYIDLLRLFAHGTWRDYKSNAGFLPELVPDQVLKLKQLSILTLAEKNKVLSYYQLMQELDISNVRELEDFLINECINAGIVRGKLNQLQKCFEVQFAAGRDLRPGTLVSLIQTLTNWLSTSDKMLLTIKEMIDQADRMKELDMEHQKEVEEKIELAKKFLQNKQPSIKLGPLEDIDMLYMDEVMSSRELGTHSKRKRTSI
SIO_010081: LOC100241435
subclass of: SO_0000673
so part of: LOC100241435
location: join(142428..142586,143793..143868,154300..154388,155402..155491,163069..163113,163207..163277,171508..171646,175046..175140,175800..175818)
location: region:142428-175818:1
so has part: feature:142428-142586:1:exon
so has part: feature:143793-143868:1:exon
so has part: feature:154300-154388:1:exon
so has part: feature:155402-155491:1:exon
so has part: feature:163069-163113:1:exon
so has part: feature:163207-163277:1:exon
so has part: feature:171508-171646:1:exon
so has part: feature:175046-175140:1:exon
so has part: feature:175800-175818:1:exon

XP_010657941.1
type: Protein
SIO_000068: ncbiprotein

position:175818:1
position: 175818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142428-142586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143793-143868:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:154300-154388:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:155402-155491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:163069-163113:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:163207-163277:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:171508-171646:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:175046-175140:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:175800-175818:1:exon

LOC100241435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100241435
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COP9 signalosome complex subunit 7 isoform X5
translation: MGAEQRETQAIEQFVKRASDLEGSSLVDFIIQATSHSSLFAFSEILAVPSVVELHGTQYSVYIDLLRLFAHGTWRDYKSNAGFLPELVPDQVLKLKQLSILTLAEKNKVLSYYQLMQELDISNVRELEDFLINECINAGIVRGKLNQLQKCFEVQFAAGRDLRPGTLVSLIQTLTNWLSTSDKMLLTIKEMIDQADRMKELDMEHQKEVEEKIELAKKFLQNKPSIKLGPLEDIDMLYMDEVMSSRELGTHSKRKRTSI
SIO_010081: LOC100241435
subclass of: SO_0000673
so part of: LOC100241435
location: join(142428..142586,143793..143868,154300..154388,155402..155491,163069..163113,163207..163277,171508..171646,175049..175140,175800..175818)
location: region:142428-175818:1
so has part: feature:142428-142586:1:exon
so has part: feature:143793-143868:1:exon
so has part: feature:154300-154388:1:exon
so has part: feature:155402-155491:1:exon
so has part: feature:163069-163113:1:exon
so has part: feature:163207-163277:1:exon
so has part: feature:171508-171646:1:exon
so has part: feature:175049-175140:1:exon
so has part: feature:175800-175818:1:exon

XP_019071757.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142428-142586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143793-143868:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:154300-154388:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:155402-155491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:163069-163113:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:163207-163277:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:171508-171646:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:175049-175140:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:175800-175818:1:exon

LOC100241435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100241435
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COP9 signalosome complex subunit 7 isoform X1
translation: MGAEQRETQAIEQFVKRASDLEGSSLVDFIIQATSHSSLFAFSEILAVPSVVELHGTQYSVYIDLLRLFAHGTWRDYKSNAGFLPELVPDQVLKLKQLSILTLAEKNKVLSYYQLMQELDISNVRELEDFLINECINAGIVRGKLNQLQKCFEVQFAAGRDLRPGTLVSLIQTLTNWLSTSDKMLLTIKEMIDQADRMKELDMEHQKEVEEKIELAKKFLQNKQPSIKLGPLEDIDMLYMDEVMSSRELGTHSKRYHISNTLHMSWSTNYAHLFTLAQDYTMYFHYMDKEMT
SIO_010081: LOC100241435
subclass of: SO_0000673
so part of: LOC100241435
location: join(142428..142586,143793..143868,154300..154388,155402..155491,163069..163113,163207..163277,171508..171646,175046..175255)
location: region:142428-175255:1
so has part: feature:142428-142586:1:exon
so has part: feature:143793-143868:1:exon
so has part: feature:154300-154388:1:exon
so has part: feature:155402-155491:1:exon
so has part: feature:163069-163113:1:exon
so has part: feature:163207-163277:1:exon
so has part: feature:171508-171646:1:exon
so has part: feature:175046-175255:1:exon

XP_010657921.1
type: Protein
SIO_000068: ncbiprotein

position:175255:1
position: 175255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142428-142586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143793-143868:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:154300-154388:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:155402-155491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:163069-163113:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:163207-163277:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:171508-171646:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:175046-175255:1:exon

LOC100241435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100241435
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COP9 signalosome complex subunit 7 isoform X2
translation: MGAEQRETQAIEQFVKRASDLEGSSLVDFIIQATSHSSLFAFSEILAVPSVVELHGTQYSVYIDLLRLFAHGTWRDYKSNAGFLPELVPDQVLKLKQLSILTLAEKNKVLSYYQLMQELDISNVRELEDFLINECINAGIVRGKLNQLQKCFEVQFAAGRDLRPGTLVSLIQTLTNWLSTSDKMLLTIKEMIDQADRMKELDMEHQKEVEEKIELAKKFLQNKPSIKLGPLEDIDMLYMDEVMSSRELGTHSKRYHISNTLHMSWSTNYAHLFTLAQDYTMYFHYMDKEMT
SIO_010081: LOC100241435
subclass of: SO_0000673
so part of: LOC100241435
location: join(142428..142586,143793..143868,154300..154388,155402..155491,163069..163113,163207..163277,171508..171646,175049..175255)
location: region:142428-175255:1
so has part: feature:142428-142586:1:exon
so has part: feature:143793-143868:1:exon
so has part: feature:154300-154388:1:exon
so has part: feature:155402-155491:1:exon
so has part: feature:163069-163113:1:exon
so has part: feature:163207-163277:1:exon
so has part: feature:171508-171646:1:exon
so has part: feature:175049-175255:1:exon

XP_003631371.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142428-142586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143793-143868:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:154300-154388:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:155402-155491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:163069-163113:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:163207-163277:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:171508-171646:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:175049-175255:1:exon

LOC100241435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100241435
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COP9 signalosome complex subunit 7 isoform X3
translation: MGAEQRETQAIEQFVKRASDLEGSSLVDFIIQATSHSSLFAFSEILAVPSVVELHGTQYSVYIDLLRLFAHGTWRDYKSNAGFLPELVPDQVLKLKQLSILTLAEKNKVLSYYQLMQELDISNVRELEDFLINECINAVQFAAGRDLRPGTLVSLIQTLTNWLSTSDKMLLTIKEMIDQADRMKELDMEHQKEVEEKIELAKKFLQNKQPSIKLGPLEDIDMLYMDEVMSSRELGTHSKRYHISNTLHMSWSTNYAHLFTLAQDYTMYFHYMDKEMT
SIO_010081: LOC100241435
subclass of: SO_0000673
so part of: LOC100241435
location: join(142428..142586,143793..143868,154300..154388,155402..155491,163207..163277,171508..171646,175046..175255)
location: region:142428-175255:1
so has part: feature:142428-142586:1:exon
so has part: feature:143793-143868:1:exon
so has part: feature:154300-154388:1:exon
so has part: feature:155402-155491:1:exon
so has part: feature:163207-163277:1:exon
so has part: feature:171508-171646:1:exon
so has part: feature:175046-175255:1:exon

XP_010657933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142428-142586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143793-143868:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:154300-154388:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:155402-155491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:163207-163277:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:171508-171646:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:175046-175255:1:exon

LOC100241435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100241435
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COP9 signalosome complex subunit 7 isoform X6
translation: MGAEQRETQAIEQFVKRASDLEGSSLVDFIIQATSHSSLFAFSEILAVPSVVELHGTQYSVYIDLLRLFAHGTWRDYKSNAGFLPELVPDQVLKLKQLSILTLAEKNKVLSYYQLMQELDISNVRELEDFLINECINAGIVRGKLNQLQKCFEVQFAAGRDLRPGTLVSLIQTLTNWLSTSDKMLLTIKEMIDQADRMKELDMEHQKEVEEKIELAKKFLQNKGLHNVSSLVSSWGHWRTLTCSIWMK
SIO_010081: LOC100241435
subclass of: SO_0000673
so part of: LOC100241435
location: join(142428..142586,143793..143868,154300..154388,155402..155491,163069..163113,163207..163277,171508..171646,175029..175106)
location: region:142428-175106:1
so has part: feature:142428-142586:1:exon
so has part: feature:143793-143868:1:exon
so has part: feature:154300-154388:1:exon
so has part: feature:155402-155491:1:exon
so has part: feature:163069-163113:1:exon
so has part: feature:163207-163277:1:exon
so has part: feature:171508-171646:1:exon
so has part: feature:175029-175106:1:exon

XP_010657949.1
type: Protein
SIO_000068: ncbiprotein

position:175106:1
position: 175106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142428-142586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143793-143868:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:154300-154388:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:155402-155491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:163069-163113:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:163207-163277:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:171508-171646:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:175029-175106:1:exon

LOC100241435
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100241435
product: COP9 signalosome complex subunit 7, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_019216223.1
SIO_010081: LOC100241435
subclass of: SO_0000673
so part of: LOC100241435
location: join(142469..142586,142673..142831,143793..143868,155402..155491,163069..163113,163207..163277,171508..171646,175046..175537)
location: region:142469-175537:1
so has part: feature:142469-142586:1:exon
so has part: feature:142673-142831:1:exon
so has part: feature:143793-143868:1:exon
so has part: feature:155402-155491:1:exon
so has part: feature:163069-163113:1:exon
so has part: feature:163207-163277:1:exon
so has part: feature:171508-171646:1:exon
so has part: feature:175046-175537:1:exon

position:142469:1
position: 142469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142469-142586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:142673-142831:1:exon

position:142673:1
position: 142673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142831:1
position: 142831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:143793-143868:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:155402-155491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:163069-163113:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:163207-163277:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:171508-171646:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:175046-175537:1:exon

LOC100241435
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100241435
product: COP9 signalosome complex subunit 7, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_019216218.1
SIO_010081: LOC100241435
subclass of: SO_0000673
so part of: LOC100241435
location: join(142469..142586,142673..142826,143793..143868,155402..155491,163069..163113,163207..163277,171508..171646,175046..175537)
location: region:142469-175537:1
so has part: feature:142469-142586:1:exon
so has part: feature:142673-142826:1:exon
so has part: feature:143793-143868:1:exon
so has part: feature:155402-155491:1:exon
so has part: feature:163069-163113:1:exon
so has part: feature:163207-163277:1:exon
so has part: feature:171508-171646:1:exon
so has part: feature:175046-175537:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:142469-142586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:142673-142826:1:exon

position:142826:1
position: 142826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:143793-143868:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:155402-155491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:163069-163113:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:163207-163277:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:171508-171646:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:175046-175537:1:exon

LOC100241435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100241435
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COP9 signalosome complex subunit 7 isoform X8
translation: MELNILYTLICSVSLLMVHGGITRVLSYYQLMQELDISNVRELEDFLINECINAGIVRGKLNQLQKCFEVQFAAGRDLRPGTLVSLIQTLTNWLSTSDKMLLTIKEMIDQADRMKELDMEHQKEVEEKIELAKKFLQNKQPSIKLGPLEDIDMLYMDEVMSSRELGTHSKRYHISNTLHMSWSTNYAHLFTLAQDYTMYFHYMDKEMT
SIO_010081: LOC100241435
subclass of: SO_0000673
so part of: LOC100241435
location: join(143797..143868,155402..155491,163069..163113,163207..163277,171508..171646,175046..175255)
location: region:143797-175255:1
so has part: feature:143797-143868:1:exon
so has part: feature:155402-155491:1:exon
so has part: feature:163069-163113:1:exon
so has part: feature:163207-163277:1:exon
so has part: feature:171508-171646:1:exon
so has part: feature:175046-175255:1:exon

XP_019071763.1
type: Protein
SIO_000068: ncbiprotein

position:143797:1
position: 143797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143797-143868:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:155402-155491:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:163069-163113:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:163207-163277:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:171508-171646:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:175046-175255:1:exon

LOC100241435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100241435
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COP9 signalosome complex subunit 7 isoform X8
translation: MELNILYTLICSVSLLMVHGGITRVLSYYQLMQELDISNVRELEDFLINECINAGIVRGKLNQLQKCFEVQFAAGRDLRPGTLVSLIQTLTNWLSTSDKMLLTIKEMIDQADRMKELDMEHQKEVEEKIELAKKFLQNKQPSIKLGPLEDIDMLYMDEVMSSRELGTHSKRYHISNTLHMSWSTNYAHLFTLAQDYTMYFHYMDKEMT
SIO_010081: LOC100241435
subclass of: SO_0000673
so part of: LOC100241435
location: join(143797..143868,155402..155491,163069..163113,163207..163277,171508..171646,175046..175255)
location: region:143797-175255:1
so has part: feature:143797-143868:1:exon
so has part: feature:155402-155491:1:exon
so has part: feature:163069-163113:1:exon
so has part: feature:163207-163277:1:exon
so has part: feature:171508-171646:1:exon
so has part: feature:175046-175255:1:exon

XP_019071768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143797-143868:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:155402-155491:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:163069-163113:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:163207-163277:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:171508-171646:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:175046-175255:1:exon

LOC104881030
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC104881030
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 143875..148383
location: region:143875-148383:1
so has part: feature:143875-148383:1:exon
subclass of: SO_0000010

104881030
type: Gene
SIO_000068: ncbigene

position:143875:1
position: 143875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148383:1
position: 148383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143875-148383:1:exon

LOC104881030
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104881030
product: uncharacterized LOC104881030
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XM_010659614.1
SIO_010081: LOC104881030
subclass of: SO_0000673
so part of: LOC104881030
location: join(143875..147848,148050..148383)
location: region:143875-148383:1
so has part: feature:143875-147848:1:exon
so has part: feature:148050-148383:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:143875-147848:1:exon

position:147848:1
position: 147848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:148050-148383:1:exon

position:148050:1
position: 148050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104881030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104881030
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC104881030
translation: MAEMLRRLGCYVREESLPKKGATLLRSSMGKTYVEAAVQSKEKETAVVRVELCKRELSRNMGKLVHCLVGSWDPSSGKGDDLRGWGTKLAKFWSLKGNLGIAKLERGKALLEFEVLAEAEKALKIGGFPWAGSPLSLEKWRPERGCLPEGEKRSEAWVRILGLPVSLWERDILRRIGDACGGFLDTDSQTETLEDLQWARILVKLNKERPPNVVEVRTEEFCYELTLWWEIRPAVRMARKRKGKSILVSEGKVGGEVSARARGRVRGLVGGPSLEVRLQSDDGTRGQSSGLGLRIRIRVWCWMGPMNRVGWRRSGPLGLLRPLGPSRPRPILANLGHPILGCLLTLGGPRRS
SIO_010081: LOC104881030
subclass of: SO_0000673
so part of: LOC104881030
location: 145995..147053
location: region:145995-147053:1
so has part: feature:145995-147053:1:exon

XP_010657916.1
type: Protein
SIO_000068: ncbiprotein

position:145995:1
position: 145995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147053:1
position: 147053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145995-147053:1:exon

LOC100254640
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100254640
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(177754..178978)
location: region:177754-178978:-1
so has part: feature:177754-178978:-1:exon
subclass of: SO_0000010

100254640
type: Gene
SIO_000068: ncbigene

position:177754:-1
position: 177754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178978:-1
position: 178978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177754-178978:-1:exon

LOC100254640
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100254640
product: ethylene-responsive transcription factor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_002270545.4
SIO_010081: LOC100254640
subclass of: SO_0000673
so part of: LOC100254640
location: complement(177754..178978)
location: region:177754-178978:-1
so has part: feature:177754-178978:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:177754-178978:-1:exon

LOC100254640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100254640
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ethylene-responsive transcription factor 2
translation: MCDYSSNPSSDFALLESVRRHLFDDSDSRRFDAPLYCRSNSFSSLFETGGELPLKEDDSDDMVIYGFLRDAAIGGWTPTLAPLFSETASYGFSAAPAVAVKSEPEVFPAEVIGVPEKTVDPPAKLPAPAVVPAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPDPVRVTSKRSSPEPSSSSTSSSSSDNSSPKRRKKVSSLAAPAVAPATAQTGIEIGKSMEGSQAGYEVAQLTHGPQLLVR
SIO_010081: LOC100254640
subclass of: SO_0000673
so part of: LOC100254640
location: complement(178039..178887)
location: region:178039-178887:-1
so has part: feature:178039-178887:-1:exon

XP_002270581.2
type: Protein
SIO_000068: ncbiprotein

position:178039:-1
position: 178039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178887:-1
position: 178887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178039-178887:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 29760
estimated length: 500
gap type: between scaffolds
so part of: sequence
location: 187085..187584
location: region:187085-187584:1
so has part: feature:187085-187584:1:region

position:187085:1
position: 187085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187584:1
position: 187584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187085-187584:1:region

LOC100248355
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100248355
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <197985..211750
location: region:197985-211750:1
so has part: feature:197985-211750:1:exon
subclass of: SO_0000010

100248355
type: Gene
SIO_000068: ncbigene

position:197985:1
position: 197985
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:211750:1
position: 211750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197985-211750:1:exon

LOC100248355
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100248355
product: probable E3 ubiquitin-protein ligase RHB1A
inference: similar to RNA sequence (same species):INSD:GAKH01058342.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 882 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 225 samples with support for all annotated introns
transcript id: XM_002279964.3
SIO_010081: LOC100248355
subclass of: SO_0000673
so part of: LOC100248355
location: join(<197985..198091,206225..206348,210210..210642,210814..210923,211017..211750)
location: region:197985-211750:1
so has part: feature:197985-198091:1:exon
so has part: feature:206225-206348:1:exon
so has part: feature:210210-210642:1:exon
so has part: feature:210814-210923:1:exon
so has part: feature:211017-211750:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:197985-198091:1:exon

position:198091:1
position: 198091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:206225-206348:1:exon

position:206225:1
position: 206225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206348:1
position: 206348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:210210-210642:1:exon

position:210210:1
position: 210210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210642:1
position: 210642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:210814-210923:1:exon

position:210814:1
position: 210814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210923:1
position: 210923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:211017-211750:1:exon

position:211017:1
position: 211017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100248355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100248355
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable E3 ubiquitin-protein ligase RHB1A
translation: MGGCCCCSSKGTELNGTPAYYYCPRASEEHEPLSSHHGAASTLSTGLLVDTNLGTSPPDTYRPPPAPIPYDVDLGHPQTPPVAEESCVNKNDTVVQTTNSGSLGEAVEGNMLETLAKCEDLKQSDCKMLAQSELTSSKETEVELSKSGDPIVSSTDEEDVCPTCLEEYDAENPKIVTKCEHHFHLACILEWMERSDTCPVCDKEMIFNTATNA
SIO_010081: LOC100248355
subclass of: SO_0000673
so part of: LOC100248355
location: join(206283..206348,210210..210642,210814..210923,211017..211049)
location: region:206283-211049:1
so has part: feature:206283-206348:1:exon
so has part: feature:210210-210642:1:exon
so has part: feature:210814-210923:1:exon
so has part: feature:211017-211049:1:exon

XP_002280000.1
type: Protein
SIO_000068: ncbiprotein

position:206283:1
position: 206283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211049:1
position: 211049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206283-206348:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:210210-210642:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:210814-210923:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:211017-211049:1:exon

LOC100245040
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100245040
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 213217..235427
location: region:213217-235427:1
so has part: feature:213217-235427:1:exon
subclass of: SO_0000010

100245040
type: Gene
SIO_000068: ncbigene

position:213217:1
position: 213217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235427:1
position: 235427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213217-235427:1:exon

LOC100245040
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100245040
product: AT-rich interactive domain-containing protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019216233.1
SIO_010081: LOC100245040
subclass of: SO_0000673
so part of: LOC100245040
location: join(213217..214635,223453..231826,234846..234939,235141..235427)
location: region:213217-235427:1
so has part: feature:213217-214635:1:exon
so has part: feature:223453-231826:1:exon
so has part: feature:234846-234939:1:exon
so has part: feature:235141-235427:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:213217-214635:1:exon

position:214635:1
position: 214635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:223453-231826:1:exon

position:223453:1
position: 223453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231826:1
position: 231826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:234846-234939:1:exon

position:234846:1
position: 234846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234939:1
position: 234939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:235141-235427:1:exon

position:235141:1
position: 235141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100245040
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100245040
product: AT-rich interactive domain-containing protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_019216228.1
SIO_010081: LOC100245040
subclass of: SO_0000673
so part of: LOC100245040
location: join(213217..214635,223453..231826,234846..235124)
location: region:213217-235124:1
so has part: feature:213217-214635:1:exon
so has part: feature:223453-231826:1:exon
so has part: feature:234846-235124:1:exon

position:235124:1
position: 235124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213217-214635:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:223453-231826:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:234846-235124:1:exon

LOC100245040
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100245040
product: AT-rich interactive domain-containing protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_019216229.1
SIO_010081: LOC100245040
subclass of: SO_0000673
so part of: LOC100245040
location: join(213217..214635,223453..228687,228799..231826,234846..235124)
location: region:213217-235124:1
so has part: feature:213217-214635:1:exon
so has part: feature:223453-228687:1:exon
so has part: feature:228799-231826:1:exon
so has part: feature:234846-235124:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:213217-214635:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:223453-228687:1:exon

position:228687:1
position: 228687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:228799-231826:1:exon

position:228799:1
position: 228799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:234846-235124:1:exon

LOC100245040
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100245040
product: AT-rich interactive domain-containing protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_010659834.2
SIO_010081: LOC100245040
subclass of: SO_0000673
so part of: LOC100245040
location: join(213217..214635,223453..227654,228655..228687,228799..231826,234846..235124)
location: region:213217-235124:1
so has part: feature:213217-214635:1:exon
so has part: feature:223453-227654:1:exon
so has part: feature:228655-228687:1:exon
so has part: feature:228799-231826:1:exon
so has part: feature:234846-235124:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:213217-214635:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:223453-227654:1:exon

position:227654:1
position: 227654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:228655-228687:1:exon

position:228655:1
position: 228655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:228799-231826:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:234846-235124:1:exon

LOC100245040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100245040
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-rich interactive domain-containing protein 2
translation: MPMDGWSVPRNGSVLDCGETGGSCETDGICVDIGNNNSLNGTDKLQVLFDQVLLIFMKEVLGNECVRPIPAMLGDGRSVDLFKLFWVVRGKGGYEWVSDKGLWGLVAEECGLDVGVKTCLKLIYFKYLDQLDQWLLGILRDGSLDKGEGECGGKLDSVLEELGTEFRGLILGGTGPKEKDDGVFELESERTDNCVDLDKEKSILNLSIVLRRAEKSPNDDDEKNCVDGGDDVAIQDPIIAKKSSFSRKRKRESFSGMLNWVREIAKHPEEPYKGNKNGNEVFSTQILRVRESLLIRRKVHTKEEQSLLQKQKMHPSMYEDNIVVNHQSTEKSRCSRRLFSVKSHLCSCSAAQSKLPGPHRTKSESCPKEQALTPNEQEPENTNTLDDLFPDDLFLKPIPVGPNFQAEVPEWTGEVTESDSKWLGTQVWPLENGECSFRIEKDCVGRGKPDSCDCRFSGSVECVRFHIAEKRMKLKLDLGSLFYHWRFDRMGEEISLAWTTEEEKRFKHMIRLNSSLQSPSFWDNALRIFPTKTREALVSYYFNVFLIRRRIYQNRVTPRKIDSDDDELEFGSLGGSFGHEVIKVPWSEFLTCTQNEQSTELD
SIO_010081: LOC100245040
subclass of: SO_0000673
so part of: LOC100245040
location: join(213709..214635,223453..224334)
location: region:213709-224334:1
so has part: feature:213709-214635:1:exon
so has part: feature:223453-224334:1:exon

XP_019071773.1
type: Protein
SIO_000068: ncbiprotein

position:213709:1
position: 213709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224334:1
position: 224334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213709-214635:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:223453-224334:1:exon

LOC100245040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100245040
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-rich interactive domain-containing protein 2
translation: MPMDGWSVPRNGSVLDCGETGGSCETDGICVDIGNNNSLNGTDKLQVLFDQVLLIFMKEVLGNECVRPIPAMLGDGRSVDLFKLFWVVRGKGGYEWVSDKGLWGLVAEECGLDVGVKTCLKLIYFKYLDQLDQWLLGILRDGSLDKGEGECGGKLDSVLEELGTEFRGLILGGTGPKEKDDGVFELESERTDNCVDLDKEKSILNLSIVLRRAEKSPNDDDEKNCVDGGDDVAIQDPIIAKKSSFSRKRKRESFSGMLNWVREIAKHPEEPYKGNKNGNEVFSTQILRVRESLLIRRKVHTKEEQSLLQKQKMHPSMYEDNIVVNHQSTEKSRCSRRLFSVKSHLCSCSAAQSKLPGPHRTKSESCPKEQALTPNEQEPENTNTLDDLFPDDLFLKPIPVGPNFQAEVPEWTGEVTESDSKWLGTQVWPLENGECSFRIEKDCVGRGKPDSCDCRFSGSVECVRFHIAEKRMKLKLDLGSLFYHWRFDRMGEEISLAWTTEEEKRFKHMIRLNSSLQSPSFWDNALRIFPTKTREALVSYYFNVFLIRRRIYQNRVTPRKIDSDDDELEFGSLGGSFGHEVIKVPWSEFLTCTQNEQSTELD
SIO_010081: LOC100245040
subclass of: SO_0000673
so part of: LOC100245040
location: join(213709..214635,223453..224334)
location: region:213709-224334:1
so has part: feature:213709-214635:1:exon
so has part: feature:223453-224334:1:exon

XP_019071774.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213709-214635:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:223453-224334:1:exon

LOC100245040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100245040
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-rich interactive domain-containing protein 2
translation: MPMDGWSVPRNGSVLDCGETGGSCETDGICVDIGNNNSLNGTDKLQVLFDQVLLIFMKEVLGNECVRPIPAMLGDGRSVDLFKLFWVVRGKGGYEWVSDKGLWGLVAEECGLDVGVKTCLKLIYFKYLDQLDQWLLGILRDGSLDKGEGECGGKLDSVLEELGTEFRGLILGGTGPKEKDDGVFELESERTDNCVDLDKEKSILNLSIVLRRAEKSPNDDDEKNCVDGGDDVAIQDPIIAKKSSFSRKRKRESFSGMLNWVREIAKHPEEPYKGNKNGNEVFSTQILRVRESLLIRRKVHTKEEQSLLQKQKMHPSMYEDNIVVNHQSTEKSRCSRRLFSVKSHLCSCSAAQSKLPGPHRTKSESCPKEQALTPNEQEPENTNTLDDLFPDDLFLKPIPVGPNFQAEVPEWTGEVTESDSKWLGTQVWPLENGECSFRIEKDCVGRGKPDSCDCRFSGSVECVRFHIAEKRMKLKLDLGSLFYHWRFDRMGEEISLAWTTEEEKRFKHMIRLNSSLQSPSFWDNALRIFPTKTREALVSYYFNVFLIRRRIYQNRVTPRKIDSDDDELEFGSLGGSFGHEVIKVPWSEFLTCTQNEQSTELD
SIO_010081: LOC100245040
subclass of: SO_0000673
so part of: LOC100245040
location: join(213709..214635,223453..224334)
location: region:213709-224334:1
so has part: feature:213709-214635:1:exon
so has part: feature:223453-224334:1:exon

XP_019071778.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213709-214635:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:223453-224334:1:exon

LOC100245040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100245040
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-rich interactive domain-containing protein 2
translation: MPMDGWSVPRNGSVLDCGETGGSCETDGICVDIGNNNSLNGTDKLQVLFDQVLLIFMKEVLGNECVRPIPAMLGDGRSVDLFKLFWVVRGKGGYEWVSDKGLWGLVAEECGLDVGVKTCLKLIYFKYLDQLDQWLLGILRDGSLDKGEGECGGKLDSVLEELGTEFRGLILGGTGPKEKDDGVFELESERTDNCVDLDKEKSILNLSIVLRRAEKSPNDDDEKNCVDGGDDVAIQDPIIAKKSSFSRKRKRESFSGMLNWVREIAKHPEEPYKGNKNGNEVFSTQILRVRESLLIRRKVHTKEEQSLLQKQKMHPSMYEDNIVVNHQSTEKSRCSRRLFSVKSHLCSCSAAQSKLPGPHRTKSESCPKEQALTPNEQEPENTNTLDDLFPDDLFLKPIPVGPNFQAEVPEWTGEVTESDSKWLGTQVWPLENGECSFRIEKDCVGRGKPDSCDCRFSGSVECVRFHIAEKRMKLKLDLGSLFYHWRFDRMGEEISLAWTTEEEKRFKHMIRLNSSLQSPSFWDNALRIFPTKTREALVSYYFNVFLIRRRIYQNRVTPRKIDSDDDELEFGSLGGSFGHEVIKVPWSEFLTCTQNEQSTELD
SIO_010081: LOC100245040
subclass of: SO_0000673
so part of: LOC100245040
location: join(213709..214635,223453..224334)
location: region:213709-224334:1
so has part: feature:213709-214635:1:exon
so has part: feature:223453-224334:1:exon

XP_010658136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213709-214635:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:223453-224334:1:exon

LOC100253472
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100253472
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 236369..241188
location: region:236369-241188:1
so has part: feature:236369-241188:1:exon
subclass of: SO_0000010

100253472
type: Gene
SIO_000068: ncbigene

position:236369:1
position: 236369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241188:1
position: 241188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236369-241188:1:exon

LOC100253472
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100253472
product: ubiquitin-conjugating enzyme E2 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 205 samples with support for all annotated introns
transcript id: XM_010659843.2
SIO_010081: LOC100253472
subclass of: SO_0000673
so part of: LOC100253472
location: join(236369..236609,236691..236770,237320..237434,237562..237614,237777..237884,240720..241188)
location: region:236369-241188:1
so has part: feature:236369-236609:1:exon
so has part: feature:236691-236770:1:exon
so has part: feature:237320-237434:1:exon
so has part: feature:237562-237614:1:exon
so has part: feature:237777-237884:1:exon
so has part: feature:240720-241188:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:236369-236609:1:exon

position:236609:1
position: 236609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:236691-236770:1:exon

position:236691:1
position: 236691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236770:1
position: 236770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:237320-237434:1:exon

position:237320:1
position: 237320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237434:1
position: 237434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:237562-237614:1:exon

position:237562:1
position: 237562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237614:1
position: 237614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:237777-237884:1:exon

position:237777:1
position: 237777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237884:1
position: 237884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:240720-241188:1:exon

position:240720:1
position: 240720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100253472
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 29760
gene: LOC100253472
product: ubiquitin-conjugating enzyme E2 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 208 samples with support for all annotated introns
transcript id: XR_787108.2
SIO_010081: LOC100253472
so part of: LOC100253472
location: join(236369..236609,236691..236770,237320..237434,237562..237614,237756..237884,239286..239416,240720..240831)
location: region:236369-240831:1
so has part: feature:236369-236609:1:exon
so has part: feature:236691-236770:1:exon
so has part: feature:237320-237434:1:exon
so has part: feature:237562-237614:1:exon
so has part: feature:237756-237884:1:exon
so has part: feature:239286-239416:1:exon
so has part: feature:240720-240831:1:exon

position:240831:1
position: 240831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236369-236609:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:236691-236770:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237320-237434:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237562-237614:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:237756-237884:1:exon

position:237756:1
position: 237756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:239286-239416:1:exon

position:239286:1
position: 239286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239416:1
position: 239416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:240720-240831:1:exon

LOC100253472
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100253472
product: ubiquitin-conjugating enzyme E2 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 249 samples with support for all annotated introns
transcript id: XM_002279891.4
SIO_010081: LOC100253472
subclass of: SO_0000673
so part of: LOC100253472
location: join(236371..236609,236691..236770,237320..237434,237562..237614,237756..237884,240720..241188)
location: region:236371-241188:1
so has part: feature:236371-236609:1:exon
so has part: feature:236691-236770:1:exon
so has part: feature:237320-237434:1:exon
so has part: feature:237562-237614:1:exon
so has part: feature:237756-237884:1:exon
so has part: feature:240720-241188:1:exon

position:236371:1
position: 236371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236371-236609:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:236691-236770:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237320-237434:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237562-237614:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:237756-237884:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:240720-241188:1:exon

LOC100253472
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100253472
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 4 isoform X2
translation: MSSPSKRREMDLMKLMMSDYKVEMVNDGMQEFYVDFHGPGDSPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVKEYCEKYAKPENIGAAPEEKSSDEELSEDNYESSDEAVAGQADP
SIO_010081: LOC100253472
subclass of: SO_0000673
so part of: LOC100253472
location: join(236566..236609,236691..236770,237320..237434,237562..237614,237756..237884,240720..240850)
location: region:236566-240850:1
so has part: feature:236566-236609:1:exon
so has part: feature:236691-236770:1:exon
so has part: feature:237320-237434:1:exon
so has part: feature:237562-237614:1:exon
so has part: feature:237756-237884:1:exon
so has part: feature:240720-240850:1:exon

XP_002279927.1
type: Protein
SIO_000068: ncbiprotein

position:236566:1
position: 236566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240850:1
position: 240850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236566-236609:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:236691-236770:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237320-237434:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237562-237614:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:237756-237884:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:240720-240850:1:exon

LOC100253472
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100253472
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 4 isoform X1
translation: MSSPSKRREMDLMKLMMSDYKVEMVNDGMQEFYVDFHGPGDSPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFVFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVKEYCEKYAKPENIGAAPEEKSSDEELSEDNYESSDEAVAGQADP
SIO_010081: LOC100253472
subclass of: SO_0000673
so part of: LOC100253472
location: join(236566..236609,236691..236770,237320..237434,237562..237614,237777..237884,240720..240850)
location: region:236566-240850:1
so has part: feature:236566-236609:1:exon
so has part: feature:236691-236770:1:exon
so has part: feature:237320-237434:1:exon
so has part: feature:237562-237614:1:exon
so has part: feature:237777-237884:1:exon
so has part: feature:240720-240850:1:exon

XP_010658145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:236566-236609:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:236691-236770:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237320-237434:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237562-237614:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:237777-237884:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:240720-240850:1:exon

LOC100258615
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100258615
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(243971..247512)
location: region:243971-247512:-1
so has part: feature:243971-247512:-1:exon
subclass of: SO_0000010

100258615
type: Gene
SIO_000068: ncbigene

position:243971:-1
position: 243971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247512:-1
position: 247512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243971-247512:-1:exon

LOC100258615
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100258615
product: uncharacterized LOC100258615, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 238 samples with support for all annotated introns
transcript id: XM_010659861.2
SIO_010081: LOC100258615
subclass of: SO_0000673
so part of: LOC100258615
location: complement(join(243971..244332,244417..244485,244595..244657,244748..244884,244996..245119,246031..246496,246597..246757,247318..247512))
location: region:243971-247512:-1
so has part: feature:247318-247512:-1:exon
so has part: feature:246597-246757:-1:exon
so has part: feature:246031-246496:-1:exon
so has part: feature:244996-245119:-1:exon
so has part: feature:244748-244884:-1:exon
so has part: feature:244595-244657:-1:exon
so has part: feature:244417-244485:-1:exon
so has part: feature:243971-244332:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:247318-247512:-1:exon

position:247318:-1
position: 247318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:246597-246757:-1:exon

position:246597:-1
position: 246597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246757:-1
position: 246757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:246031-246496:-1:exon

position:246031:-1
position: 246031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246496:-1
position: 246496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:244996-245119:-1:exon

position:244996:-1
position: 244996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245119:-1
position: 245119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:244748-244884:-1:exon

position:244748:-1
position: 244748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244884:-1
position: 244884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:244595-244657:-1:exon

position:244595:-1
position: 244595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244657:-1
position: 244657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:244417-244485:-1:exon

position:244417:-1
position: 244417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244485:-1
position: 244485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:243971-244332:-1:exon

position:244332:-1
position: 244332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100258615
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100258615
product: uncharacterized LOC100258615, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 241 samples with support for all annotated introns
transcript id: XM_002279816.4
SIO_010081: LOC100258615
subclass of: SO_0000673
so part of: LOC100258615
location: complement(join(243971..244332,244417..244485,244595..244657,244748..244884,244975..245119,246031..246496,246597..246757,247318..247511))
location: region:243971-247511:-1
so has part: feature:247318-247511:-1:exon
so has part: feature:246597-246757:-1:exon
so has part: feature:246031-246496:-1:exon
so has part: feature:244975-245119:-1:exon
so has part: feature:244748-244884:-1:exon
so has part: feature:244595-244657:-1:exon
so has part: feature:244417-244485:-1:exon
so has part: feature:243971-244332:-1:exon

position:247511:-1
position: 247511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247318-247511:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:246597-246757:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:246031-246496:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:244975-245119:-1:exon

position:244975:-1
position: 244975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:244748-244884:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:244595-244657:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:244417-244485:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:243971-244332:-1:exon

LOC100258615
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100258615
product: uncharacterized LOC100258615, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 115 samples with support for all annotated introns
transcript id: XM_019216246.1
SIO_010081: LOC100258615
subclass of: SO_0000673
so part of: LOC100258615
location: complement(join(243971..244332,244417..244485,244595..244657,244748..244884,244975..245119,246031..246511,246597..246757,247318..247511))
location: region:243971-247511:-1
so has part: feature:247318-247511:-1:exon
so has part: feature:246597-246757:-1:exon
so has part: feature:246031-246511:-1:exon
so has part: feature:244975-245119:-1:exon
so has part: feature:244748-244884:-1:exon
so has part: feature:244595-244657:-1:exon
so has part: feature:244417-244485:-1:exon
so has part: feature:243971-244332:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:247318-247511:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:246597-246757:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:246031-246511:-1:exon

position:246511:-1
position: 246511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:244975-245119:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:244748-244884:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:244595-244657:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:244417-244485:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:243971-244332:-1:exon

LOC100258615
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100258615
product: uncharacterized LOC100258615, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 118 samples with support for all annotated introns
transcript id: XM_010659856.2
SIO_010081: LOC100258615
subclass of: SO_0000673
so part of: LOC100258615
location: complement(join(243971..244332,244417..244485,244595..244657,244748..244884,244975..245119,246031..246496,246584..246757,247318..247511))
location: region:243971-247511:-1
so has part: feature:247318-247511:-1:exon
so has part: feature:246584-246757:-1:exon
so has part: feature:246031-246496:-1:exon
so has part: feature:244975-245119:-1:exon
so has part: feature:244748-244884:-1:exon
so has part: feature:244595-244657:-1:exon
so has part: feature:244417-244485:-1:exon
so has part: feature:243971-244332:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:247318-247511:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:246584-246757:-1:exon

position:246584:-1
position: 246584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:246031-246496:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:244975-245119:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:244748-244884:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:244595-244657:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:244417-244485:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:243971-244332:-1:exon

LOC100258615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100258615
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100258615 isoform X2
translation: MLEPELCSARVLSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEPPTGNEEDDDHDFDNSSSSSDIASSIEFHKLSKPRARHTRPWAPSASVKLTNRNSHREVQSGIDAPQPIVNLAKLGTDSLWRYCKKFNIGNLNSNSSREQMLKAVQQHFTAQQVEEVPVIMGFIRAAKRLKTSGGSSRDHGVHPHSQETEDS
SIO_010081: LOC100258615
subclass of: SO_0000673
so part of: LOC100258615
location: complement(join(244210..244332,244417..244485,244595..244657,244748..244884,244996..245119,246031..246222))
location: region:244210-246222:-1
so has part: feature:246031-246222:-1:exon
so has part: feature:244996-245119:-1:exon
so has part: feature:244748-244884:-1:exon
so has part: feature:244595-244657:-1:exon
so has part: feature:244417-244485:-1:exon
so has part: feature:244210-244332:-1:exon

XP_010658163.1
type: Protein
SIO_000068: ncbiprotein

position:244210:-1
position: 244210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246222:-1
position: 246222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246031-246222:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:244996-245119:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:244748-244884:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:244595-244657:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:244417-244485:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:244210-244332:-1:exon

LOC100258615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100258615
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100258615 isoform X1
translation: MLEPELCSARVLSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEPPTGNEEDDDHDFDNSSSSSDIGEKDNDFSSSIEFHKLSKPRARHTRPWAPSASVKLTNRNSHREVQSGIDAPQPIVNLAKLGTDSLWRYCKKFNIGNLNSNSSREQMLKAVQQHFTAQQVEEVPVIMGFIRAAKRLKTSGGSSRDHGVHPHSQETEDS
SIO_010081: LOC100258615
subclass of: SO_0000673
so part of: LOC100258615
location: complement(join(244210..244332,244417..244485,244595..244657,244748..244884,244975..245119,246031..246222))
location: region:244210-246222:-1
so has part: feature:246031-246222:-1:exon
so has part: feature:244975-245119:-1:exon
so has part: feature:244748-244884:-1:exon
so has part: feature:244595-244657:-1:exon
so has part: feature:244417-244485:-1:exon
so has part: feature:244210-244332:-1:exon

XP_019071791.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:246031-246222:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:244975-245119:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:244748-244884:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:244595-244657:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:244417-244485:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:244210-244332:-1:exon

LOC100258615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100258615
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100258615 isoform X1
translation: MLEPELCSARVLSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEPPTGNEEDDDHDFDNSSSSSDIGEKDNDFSSSIEFHKLSKPRARHTRPWAPSASVKLTNRNSHREVQSGIDAPQPIVNLAKLGTDSLWRYCKKFNIGNLNSNSSREQMLKAVQQHFTAQQVEEVPVIMGFIRAAKRLKTSGGSSRDHGVHPHSQETEDS
SIO_010081: LOC100258615
subclass of: SO_0000673
so part of: LOC100258615
location: complement(join(244210..244332,244417..244485,244595..244657,244748..244884,244975..245119,246031..246222))
location: region:244210-246222:-1
so has part: feature:246031-246222:-1:exon
so has part: feature:244975-245119:-1:exon
so has part: feature:244748-244884:-1:exon
so has part: feature:244595-244657:-1:exon
so has part: feature:244417-244485:-1:exon
so has part: feature:244210-244332:-1:exon

XP_002279852.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:246031-246222:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:244975-245119:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:244748-244884:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:244595-244657:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:244417-244485:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:244210-244332:-1:exon

LOC100258615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100258615
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100258615 isoform X1
translation: MLEPELCSARVLSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEPPTGNEEDDDHDFDNSSSSSDIGEKDNDFSSSIEFHKLSKPRARHTRPWAPSASVKLTNRNSHREVQSGIDAPQPIVNLAKLGTDSLWRYCKKFNIGNLNSNSSREQMLKAVQQHFTAQQVEEVPVIMGFIRAAKRLKTSGGSSRDHGVHPHSQETEDS
SIO_010081: LOC100258615
subclass of: SO_0000673
so part of: LOC100258615
location: complement(join(244210..244332,244417..244485,244595..244657,244748..244884,244975..245119,246031..246222))
location: region:244210-246222:-1
so has part: feature:246031-246222:-1:exon
so has part: feature:244975-245119:-1:exon
so has part: feature:244748-244884:-1:exon
so has part: feature:244595-244657:-1:exon
so has part: feature:244417-244485:-1:exon
so has part: feature:244210-244332:-1:exon

XP_010658158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:246031-246222:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:244975-245119:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:244748-244884:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:244595-244657:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:244417-244485:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:244210-244332:-1:exon

LOC100263989
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100263989
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(249700..253254)
location: region:249700-253254:-1
so has part: feature:249700-253254:-1:exon
subclass of: SO_0000010

100263989
type: Gene
SIO_000068: ncbigene

position:249700:-1
position: 249700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253254:-1
position: 253254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249700-253254:-1:exon

LOC100263989
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100263989
product: serine/arginine-rich splicing factor SR45a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 19 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 249 samples with support for all annotated introns
transcript id: XM_002279648.4
SIO_010081: LOC100263989
subclass of: SO_0000673
so part of: LOC100263989
location: complement(join(249700..250054,250680..250743,251637..251786,252363..252474,252586..252687,252782..252804,253096..253254))
location: region:249700-253254:-1
so has part: feature:253096-253254:-1:exon
so has part: feature:252782-252804:-1:exon
so has part: feature:252586-252687:-1:exon
so has part: feature:252363-252474:-1:exon
so has part: feature:251637-251786:-1:exon
so has part: feature:250680-250743:-1:exon
so has part: feature:249700-250054:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:253096-253254:-1:exon

position:253096:-1
position: 253096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:252782-252804:-1:exon

position:252782:-1
position: 252782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252804:-1
position: 252804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:252586-252687:-1:exon

position:252586:-1
position: 252586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252687:-1
position: 252687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:252363-252474:-1:exon

position:252363:-1
position: 252363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252474:-1
position: 252474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:251637-251786:-1:exon

position:251637:-1
position: 251637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251786:-1
position: 251786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:250680-250743:-1:exon

position:250680:-1
position: 250680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250743:-1
position: 250743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:249700-250054:-1:exon

position:250054:-1
position: 250054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100263989
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100263989
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor SR45a
translation: MPYSREGRSVSPANSGSPIRGRRSRSRSRSRSLSRSRRSRSRSRDSVDAVNPGNNLYVTGLSTRVNASDLEKYFNSEGKVVECHLVTDPRTRESRGFGFVTMETVEDADRCIKYLNRSVLEGRLITVEKAKRRRGRTPTPGRYHGLRERRGRGGRRRSRSYSPRRWQDRDPYARDRRGRSRSPYGRRSDDYSDSNRRRRERSLSGAGRDYP
SIO_010081: LOC100263989
subclass of: SO_0000673
so part of: LOC100263989
location: complement(join(249870..250054,250680..250743,251637..251786,252363..252474,252586..252687,252782..252804))
location: region:249870-252804:-1
so has part: feature:252782-252804:-1:exon
so has part: feature:252586-252687:-1:exon
so has part: feature:252363-252474:-1:exon
so has part: feature:251637-251786:-1:exon
so has part: feature:250680-250743:-1:exon
so has part: feature:249870-250054:-1:exon

XP_002279684.1
type: Protein
SIO_000068: ncbiprotein

position:249870:-1
position: 249870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252782-252804:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:252586-252687:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:252363-252474:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251637-251786:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250680-250743:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:249870-250054:-1:exon

LOC100241708
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100241708
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(254417..263673)
location: region:254417-263673:-1
so has part: feature:254417-263673:-1:exon
subclass of: SO_0000010

100241708
type: Gene
SIO_000068: ncbigene

position:254417:-1
position: 254417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263673:-1
position: 263673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254417-263673:-1:exon

LOC100241708
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100241708
product: beta-adaptin-like protein B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 250 samples with support for all annotated introns
transcript id: XM_002279605.4
SIO_010081: LOC100241708
subclass of: SO_0000673
so part of: LOC100241708
location: complement(join(254417..255000,255488..255691,255761..255950,256236..256645,256914..257006,259084..259263,259369..259432,259531..259742,259826..259918,260032..260211,260334..260469,261393..261643,261786..261899,262139..262336,263502..263673))
location: region:254417-263673:-1
so has part: feature:263502-263673:-1:exon
so has part: feature:262139-262336:-1:exon
so has part: feature:261786-261899:-1:exon
so has part: feature:261393-261643:-1:exon
so has part: feature:260334-260469:-1:exon
so has part: feature:260032-260211:-1:exon
so has part: feature:259826-259918:-1:exon
so has part: feature:259531-259742:-1:exon
so has part: feature:259369-259432:-1:exon
so has part: feature:259084-259263:-1:exon
so has part: feature:256914-257006:-1:exon
so has part: feature:256236-256645:-1:exon
so has part: feature:255761-255950:-1:exon
so has part: feature:255488-255691:-1:exon
so has part: feature:254417-255000:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:263502-263673:-1:exon

position:263502:-1
position: 263502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:262139-262336:-1:exon

position:262139:-1
position: 262139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262336:-1
position: 262336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:261786-261899:-1:exon

position:261786:-1
position: 261786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261899:-1
position: 261899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:261393-261643:-1:exon

position:261393:-1
position: 261393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261643:-1
position: 261643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:260334-260469:-1:exon

position:260334:-1
position: 260334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260469:-1
position: 260469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:260032-260211:-1:exon

position:260032:-1
position: 260032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260211:-1
position: 260211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:259826-259918:-1:exon

position:259826:-1
position: 259826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259918:-1
position: 259918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:259531-259742:-1:exon

position:259531:-1
position: 259531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259742:-1
position: 259742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:259369-259432:-1:exon

position:259369:-1
position: 259369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259432:-1
position: 259432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:259084-259263:-1:exon

position:259084:-1
position: 259084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259263:-1
position: 259263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:256914-257006:-1:exon

position:256914:-1
position: 256914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257006:-1
position: 257006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:256236-256645:-1:exon

position:256236:-1
position: 256236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256645:-1
position: 256645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:255761-255950:-1:exon

position:255761:-1
position: 255761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255950:-1
position: 255950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:255488-255691:-1:exon

position:255488:-1
position: 255488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255691:-1
position: 255691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:254417-255000:-1:exon

position:255000:-1
position: 255000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100241708
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100241708
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-adaptin-like protein B
translation: MSGHDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTASICVAKLYDINAELVEDRGFLESLKDLISDNNPMVVANAVAALSEIQENSSRPIFEVTSHTLSKLLTALNECTEWGQVFILDALSKYKAADAREAESIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPDSFVTRVKTTPQRSEEDDYPDGSEAGYSESSAHAPDSGASPPTSSSSVPYASPKHPATTQVSPPPAAPAPDLLGDLIGLDNAIVPVDQPVEPAGPPLPVLLPASTGQGLQISAHLARKDGQIFYSMLFENNSQIPLDGFMIQFNKNSFGLAPAGPLQVPQLQPGTSARTLLPMVLFQNMAPGPPNSLLQVAVKNNQQPVWYFSDKISLLVFFSEDGKMERASFLEAWKSLPDSNEVSKEFPGITVNSLEGILDRLAASKVFFIAKRKHANQEVLYLSAQVPGGITFLIELTMVAGAPGVKCAIKTPSPEMAPLFFEAIETLLRG
SIO_010081: LOC100241708
subclass of: SO_0000673
so part of: LOC100241708
location: complement(join(254701..255000,255488..255691,255761..255950,256236..256645,256914..257006,259084..259263,259369..259432,259531..259742,259826..259918,260032..260211,260334..260469,261393..261643,261786..261899,262139..262336,263502..263588))
location: region:254701-263588:-1
so has part: feature:263502-263588:-1:exon
so has part: feature:262139-262336:-1:exon
so has part: feature:261786-261899:-1:exon
so has part: feature:261393-261643:-1:exon
so has part: feature:260334-260469:-1:exon
so has part: feature:260032-260211:-1:exon
so has part: feature:259826-259918:-1:exon
so has part: feature:259531-259742:-1:exon
so has part: feature:259369-259432:-1:exon
so has part: feature:259084-259263:-1:exon
so has part: feature:256914-257006:-1:exon
so has part: feature:256236-256645:-1:exon
so has part: feature:255761-255950:-1:exon
so has part: feature:255488-255691:-1:exon
so has part: feature:254701-255000:-1:exon

XP_002279641.1
type: Protein
SIO_000068: ncbiprotein

position:254701:-1
position: 254701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263588:-1
position: 263588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263502-263588:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:262139-262336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:261786-261899:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:261393-261643:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:260334-260469:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:260032-260211:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:259826-259918:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:259531-259742:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:259369-259432:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:259084-259263:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:256914-257006:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:256236-256645:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:255761-255950:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:255488-255691:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:254701-255000:-1:exon

LOC100250174
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100250174
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 264605..274225
location: region:264605-274225:1
so has part: feature:264605-274225:1:exon
subclass of: SO_0000010

100250174
type: Gene
SIO_000068: ncbigene

position:264605:1
position: 264605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274225:1
position: 274225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264605-274225:1:exon

LOC100250174
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100250174
product: DNA repair helicase XPB1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 230 samples with support for all annotated introns
transcript id: XM_002273408.4
SIO_010081: LOC100250174
subclass of: SO_0000673
so part of: LOC100250174
location: join(264605..264760,264841..264884,264954..265029,265153..265321,265403..265625,265716..265772,266791..266934,268046..268126,268298..268385,268757..269094,269200..269275,269372..269565,269853..270016,270107..270179,270603..270716,271244..271324,272841..272900,273403..273486,273563..273705,273828..274225)
location: region:264605-274225:1
so has part: feature:264605-264760:1:exon
so has part: feature:264841-264884:1:exon
so has part: feature:264954-265029:1:exon
so has part: feature:265153-265321:1:exon
so has part: feature:265403-265625:1:exon
so has part: feature:265716-265772:1:exon
so has part: feature:266791-266934:1:exon
so has part: feature:268046-268126:1:exon
so has part: feature:268298-268385:1:exon
so has part: feature:268757-269094:1:exon
so has part: feature:269200-269275:1:exon
so has part: feature:269372-269565:1:exon
so has part: feature:269853-270016:1:exon
so has part: feature:270107-270179:1:exon
so has part: feature:270603-270716:1:exon
so has part: feature:271244-271324:1:exon
so has part: feature:272841-272900:1:exon
so has part: feature:273403-273486:1:exon
so has part: feature:273563-273705:1:exon
so has part: feature:273828-274225:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:264605-264760:1:exon

position:264760:1
position: 264760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:264841-264884:1:exon

position:264841:1
position: 264841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264884:1
position: 264884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:264954-265029:1:exon

position:264954:1
position: 264954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265029:1
position: 265029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:265153-265321:1:exon

position:265153:1
position: 265153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265321:1
position: 265321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:265403-265625:1:exon

position:265403:1
position: 265403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265625:1
position: 265625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:265716-265772:1:exon

position:265716:1
position: 265716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265772:1
position: 265772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:266791-266934:1:exon

position:266791:1
position: 266791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266934:1
position: 266934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:268046-268126:1:exon

position:268046:1
position: 268046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268126:1
position: 268126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:268298-268385:1:exon

position:268298:1
position: 268298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268385:1
position: 268385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:268757-269094:1:exon

position:268757:1
position: 268757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269094:1
position: 269094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:269200-269275:1:exon

position:269200:1
position: 269200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269275:1
position: 269275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:269372-269565:1:exon

position:269372:1
position: 269372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269565:1
position: 269565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:269853-270016:1:exon

position:269853:1
position: 269853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270016:1
position: 270016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:270107-270179:1:exon

position:270107:1
position: 270107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270179:1
position: 270179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:270603-270716:1:exon

position:270603:1
position: 270603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270716:1
position: 270716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:271244-271324:1:exon

position:271244:1
position: 271244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271324:1
position: 271324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:272841-272900:1:exon

position:272841:1
position: 272841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272900:1
position: 272900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:273403-273486:1:exon

position:273403:1
position: 273403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273486:1
position: 273486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:273563-273705:1:exon

position:273563:1
position: 273563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273705:1
position: 273705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:273828-274225:1:exon

position:273828:1
position: 273828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100250174
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100250174
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA repair helicase XPB1
translation: MGHGEKGRPSKRHKSSSKDEHKNPVVEDEDAYYGEEFEDDYRDGEKEGKKRDFTKLELKVDHSNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIIAVLSKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFPEVLKTLLRDEVISRSRISHEGSTGNDGFTISKTVGEIEGRHDELINEAELAAAAEEKETHSFEVDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDEQICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHVERTKILEAFKTHKDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGRLQDRLAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPPDSGADLSYHRLDEQLALLGKVLSAGDDAVGLEQLDEDADDIALQKARRSVGSMSAMSGASGMVYMEYNTGRNKHGGQGQIKGKPKDPSKRHHLFKRRFG
SIO_010081: LOC100250174
subclass of: SO_0000673
so part of: LOC100250174
location: join(264751..264760,264841..264884,264954..265029,265153..265321,265403..265625,265716..265772,266791..266934,268046..268126,268298..268385,268757..269094,269200..269275,269372..269565,269853..270016,270107..270179,270603..270716,271244..271324,272841..272900,273403..273486,273563..273705,273828..273924)
location: region:264751-273924:1
so has part: feature:264751-264760:1:exon
so has part: feature:264841-264884:1:exon
so has part: feature:264954-265029:1:exon
so has part: feature:265153-265321:1:exon
so has part: feature:265403-265625:1:exon
so has part: feature:265716-265772:1:exon
so has part: feature:266791-266934:1:exon
so has part: feature:268046-268126:1:exon
so has part: feature:268298-268385:1:exon
so has part: feature:268757-269094:1:exon
so has part: feature:269200-269275:1:exon
so has part: feature:269372-269565:1:exon
so has part: feature:269853-270016:1:exon
so has part: feature:270107-270179:1:exon
so has part: feature:270603-270716:1:exon
so has part: feature:271244-271324:1:exon
so has part: feature:272841-272900:1:exon
so has part: feature:273403-273486:1:exon
so has part: feature:273563-273705:1:exon
so has part: feature:273828-273924:1:exon

XP_002273444.1
type: Protein
SIO_000068: ncbiprotein

position:264751:1
position: 264751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273924:1
position: 273924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264751-264760:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:264841-264884:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:264954-265029:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:265153-265321:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:265403-265625:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:265716-265772:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:266791-266934:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:268046-268126:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:268298-268385:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:268757-269094:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:269200-269275:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:269372-269565:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:269853-270016:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:270107-270179:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:270603-270716:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:271244-271324:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:272841-272900:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:273403-273486:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:273563-273705:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:273828-273924:1:exon

LOC104881088
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC104881088
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(278944..281080)
location: region:278944-281080:-1
so has part: feature:278944-281080:-1:exon
subclass of: SO_0000010

104881088
type: Gene
SIO_000068: ncbigene

position:278944:-1
position: 278944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281080:-1
position: 281080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278944-281080:-1:exon

LOC104881088
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104881088
product: uncharacterized LOC104881088, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_010659883.2
SIO_010081: LOC104881088
subclass of: SO_0000673
so part of: LOC104881088
location: complement(join(278944..279332,279573..279701,279787..279918,280134..281080))
location: region:278944-281080:-1
so has part: feature:280134-281080:-1:exon
so has part: feature:279787-279918:-1:exon
so has part: feature:279573-279701:-1:exon
so has part: feature:278944-279332:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:280134-281080:-1:exon

position:280134:-1
position: 280134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:279787-279918:-1:exon

position:279787:-1
position: 279787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279918:-1
position: 279918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:279573-279701:-1:exon

position:279573:-1
position: 279573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279701:-1
position: 279701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:278944-279332:-1:exon

position:279332:-1
position: 279332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104881088
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104881088
product: uncharacterized LOC104881088, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_010659879.2
SIO_010081: LOC104881088
subclass of: SO_0000673
so part of: LOC104881088
location: complement(join(278944..279332,279573..279701,279787..279918,280110..281080))
location: region:278944-281080:-1
so has part: feature:280110-281080:-1:exon
so has part: feature:279787-279918:-1:exon
so has part: feature:279573-279701:-1:exon
so has part: feature:278944-279332:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:280110-281080:-1:exon

position:280110:-1
position: 280110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:279787-279918:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279573-279701:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278944-279332:-1:exon

LOC104881088
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104881088
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC104881088 isoform X2
translation: MASDLFLIDDVVSSDIDVDLQFLSDAFSPFSDSPLDFLQAIQDDPVKEKPEDEVEVEAEAQVVEQAVPSVPMLHSSPPSREMESLSLRRSTHLAVVENGTGLASGFVGLSGLDAVKPEQRGVSLEECFYNPVFGAHSYGGDESAARMMQRSFSSHSFDGRRGFLFQPGFNAPPGSPNFQNPIIRSPENLFFNGHMRRTNHRQFSPDAASFRVGRYSAEERKERIDKYRAKRTQRNFNKTIKYACRKTLADSRPRVRGRFARNDEIEETPKAECFNAYEYEQQPWAHDFHEGGYGGRAVRGGPLYNSYGSTPFQYYGFG
SIO_010081: LOC104881088
subclass of: SO_0000673
so part of: LOC104881088
location: complement(join(279228..279332,279573..279701,279787..279918,280134..280724))
location: region:279228-280724:-1
so has part: feature:280134-280724:-1:exon
so has part: feature:279787-279918:-1:exon
so has part: feature:279573-279701:-1:exon
so has part: feature:279228-279332:-1:exon

XP_010658185.1
type: Protein
SIO_000068: ncbiprotein

position:279228:-1
position: 279228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280724:-1
position: 280724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280134-280724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:279787-279918:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279573-279701:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:279228-279332:-1:exon

LOC104881088
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104881088
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC104881088 isoform X1
translation: MASDLFLIDDVVSSDIDVDLQFLSDAFSPFSDSPLDFLQAIQDDPVKEKPEDEVEVEAEAQVVEQAVPSVPMLHSSPPSREMESLSLRRSTHLAVVENGTGLASGFVGLSGLDAVKPEQRGVSLEECFYNPVFGAHSYGGDESAARMMQRSFSSHSFDGRRGFLFQPGFNAPPGSPNFQNPIIRSPENLFFNGHMRRVCSAGDLQTNHRQFSPDAASFRVGRYSAEERKERIDKYRAKRTQRNFNKTIKYACRKTLADSRPRVRGRFARNDEIEETPKAECFNAYEYEQQPWAHDFHEGGYGGRAVRGGPLYNSYGSTPFQYYGFG
SIO_010081: LOC104881088
subclass of: SO_0000673
so part of: LOC104881088
location: complement(join(279228..279332,279573..279701,279787..279918,280110..280724))
location: region:279228-280724:-1
so has part: feature:280110-280724:-1:exon
so has part: feature:279787-279918:-1:exon
so has part: feature:279573-279701:-1:exon
so has part: feature:279228-279332:-1:exon

XP_010658181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:280110-280724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:279787-279918:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279573-279701:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:279228-279332:-1:exon

LOC100246828
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100246828
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 281180..287047
location: region:281180-287047:1
so has part: feature:281180-287047:1:exon
subclass of: SO_0000010

100246828
type: Gene
SIO_000068: ncbigene

position:281180:1
position: 281180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287047:1
position: 287047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281180-287047:1:exon

LOC100246828
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100246828
product: uncharacterized LOC100246828
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 68 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 232 samples with support for all annotated introns
transcript id: XM_002279489.2
SIO_010081: LOC100246828
subclass of: SO_0000673
so part of: LOC100246828
location: join(281180..281443,281607..281628,284696..284752,284840..284921,286001..286096,286181..286305,286399..286417,286519..287047)
location: region:281180-287047:1
so has part: feature:281180-281443:1:exon
so has part: feature:281607-281628:1:exon
so has part: feature:284696-284752:1:exon
so has part: feature:284840-284921:1:exon
so has part: feature:286001-286096:1:exon
so has part: feature:286181-286305:1:exon
so has part: feature:286399-286417:1:exon
so has part: feature:286519-287047:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:281180-281443:1:exon

position:281443:1
position: 281443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:281607-281628:1:exon

position:281607:1
position: 281607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281628:1
position: 281628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:284696-284752:1:exon

position:284696:1
position: 284696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284752:1
position: 284752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:284840-284921:1:exon

position:284840:1
position: 284840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284921:1
position: 284921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:286001-286096:1:exon

position:286001:1
position: 286001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286096:1
position: 286096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:286181-286305:1:exon

position:286181:1
position: 286181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286305:1
position: 286305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:286399-286417:1:exon

position:286399:1
position: 286399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286417:1
position: 286417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:286519-287047:1:exon

position:286519:1
position: 286519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100246828
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100246828
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100246828
translation: MASQEYLDKMQGRQNFRNLWHTDLMGTIQADTRYCCFAFWCAPCVSYLLRKRALYNDMSRYVCCAGYMPCSGRCGESRCPEFCLCTEVLLCFGNSVASTRFLLQDEFNIQTTKCDNCIIGFMFCLQQIACIFSIVAMIVGSDEIQEASQLLSCLADMVYCTVCACMQTQHKIEMDKRDGMFGPQPMAIPPLQQMSRIDQPFPPSVGYPPQPAYGQPYGYPPPQAHGYPAASYPPKP
SIO_010081: LOC100246828
subclass of: SO_0000673
so part of: LOC100246828
location: join(281344..281443,281607..281628,284696..284752,284840..284921,286001..286096,286181..286305,286399..286417,286519..286728)
location: region:281344-286728:1
so has part: feature:281344-281443:1:exon
so has part: feature:281607-281628:1:exon
so has part: feature:284696-284752:1:exon
so has part: feature:284840-284921:1:exon
so has part: feature:286001-286096:1:exon
so has part: feature:286181-286305:1:exon
so has part: feature:286399-286417:1:exon
so has part: feature:286519-286728:1:exon

XP_002279525.1
type: Protein
SIO_000068: ncbiprotein

position:281344:1
position: 281344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286728:1
position: 286728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281344-281443:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:281607-281628:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:284696-284752:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284840-284921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:286001-286096:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:286181-286305:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:286399-286417:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:286519-286728:1:exon

LOC100251967
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100251967
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(290741..291843)
location: region:290741-291843:-1
so has part: feature:290741-291843:-1:exon
subclass of: SO_0000010

100251967
type: Gene
SIO_000068: ncbigene

position:290741:-1
position: 290741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291843:-1
position: 291843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290741-291843:-1:exon

LOC100251967
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100251967
product: E3 ubiquitin-protein ligase RHA1B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_002279437.4
SIO_010081: LOC100251967
subclass of: SO_0000673
so part of: LOC100251967
location: complement(290741..291843)
location: region:290741-291843:-1
so has part: feature:290741-291843:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:290741-291843:-1:exon

LOC100251967
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100251967
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RHA1B
translation: MGFPVGYTELLLPKLLLHTLSLLGFIRKLISYFFRFLGLTDFLEPDIVWTEGSTQVPEFQSVSAVLIREILPVMKFEELVGAGAGDPPDQCAVCLYEFEGQEEIRRLTNCRHIFHRSCLDRWMDCDQKTCPLCRTPFIPDDMQEAFNERLWAASALPDFYGDYSPLGL
SIO_010081: LOC100251967
subclass of: SO_0000673
so part of: LOC100251967
location: complement(291153..291659)
location: region:291153-291659:-1
so has part: feature:291153-291659:-1:exon

XP_002279473.1
type: Protein
SIO_000068: ncbiprotein

position:291153:-1
position: 291153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291659:-1
position: 291659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291153-291659:-1:exon

LOC100257094
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100257094
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 303222..306681
location: region:303222-306681:1
so has part: feature:303222-306681:1:exon
subclass of: SO_0000010

100257094
type: Gene
SIO_000068: ncbigene

position:303222:1
position: 303222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306681:1
position: 306681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303222-306681:1:exon

LOC100257094
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100257094
product: BTB/POZ domain-containing protein At1g63850
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 243 samples with support for all annotated introns
transcript id: XM_002279346.4
SIO_010081: LOC100257094
subclass of: SO_0000673
so part of: LOC100257094
location: join(303222..304820,305299..306681)
location: region:303222-306681:1
so has part: feature:303222-304820:1:exon
so has part: feature:305299-306681:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:303222-304820:1:exon

position:304820:1
position: 304820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:305299-306681:1:exon

position:305299:1
position: 305299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100257094
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100257094
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein At1g63850
translation: MATTTTHLKIQTQPIKPKRRRCRETTISATASAVATVGAAAESSVGHLGQVGRKLDPPTVVSSESSWCCPASKPFPVGPPPPPPPPPLPRLPTALQRRGVTSLSSSQETELVQGSIASSPSESPSPSLAPSTFKIRFSPGTNSPVMDFTPISGTAINGGAAHDSFPSSFSKFNSALTAGLLNPMSPPPPPPSEKTRSSPTLFEMMASEPECQPRPQIAPSMGPVSVLRPPISVQDKSALMMQRISEILASRSPGNQFNDMSSSDIKLTLSSKDGVSISMSVHRQILVAHSRFFAAKLSDRWTRQQQRSASPYIVEIADCDDVEIYIETLRLMYCKDLRKKLMKEDVSRVLGILKVSAAIEFDAGVLSCLEYLEAAPWAEDEEEKVAALLSELRLEGVVAGEVLKRVSVEITAGTEESNENEEVLLKLLHVVLEGKDEKARREMKGLVLKMLRENASQNDLRKESLYSACDGCLELLRLHFLRAAASDLQDVGQIARQADNLHWILDILIDRQIAEDFLKTWASQSELSHAHSKVPVVHRYEVSRVTARLFVGIGKGQLLASKDARCLLLQTWLVPFYDDFGWMRRASKGLDRHLVEDGLSNTILTLPLAWQQEILLAWFDRFLNSGEDCPNIQRGFEVWWRRAFWRRHGKTERPRQLRITTATIENS
SIO_010081: LOC100257094
subclass of: SO_0000673
so part of: LOC100257094
location: join(303759..304820,305299..306240)
location: region:303759-306240:1
so has part: feature:303759-304820:1:exon
so has part: feature:305299-306240:1:exon

XP_002279382.2
type: Protein
SIO_000068: ncbiprotein

position:303759:1
position: 303759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306240:1
position: 306240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303759-304820:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:305299-306240:1:exon

LOC104881089
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC104881089
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 308887..315628
location: region:308887-315628:1
so has part: feature:308887-315628:1:exon
subclass of: SO_0000010

104881089
type: Gene
SIO_000068: ncbigene

position:308887:1
position: 308887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315628:1
position: 315628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308887-315628:1:exon

LOC104881089
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104881089
product: uncharacterized LOC104881089, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 132 samples with support for all annotated introns
transcript id: XM_019216264.1
SIO_010081: LOC104881089
subclass of: SO_0000673
so part of: LOC104881089
location: join(308887..309188,309952..310589,310684..311004,311128..313805,313912..315628)
location: region:308887-315628:1
so has part: feature:308887-309188:1:exon
so has part: feature:309952-310589:1:exon
so has part: feature:310684-311004:1:exon
so has part: feature:311128-313805:1:exon
so has part: feature:313912-315628:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:308887-309188:1:exon

position:309188:1
position: 309188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:309952-310589:1:exon

position:309952:1
position: 309952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310589:1
position: 310589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:310684-311004:1:exon

position:310684:1
position: 310684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311004:1
position: 311004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:311128-313805:1:exon

position:311128:1
position: 311128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313805:1
position: 313805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:313912-315628:1:exon

position:313912:1
position: 313912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104881089
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104881089
product: uncharacterized LOC104881089, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_019216259.1
SIO_010081: LOC104881089
subclass of: SO_0000673
so part of: LOC104881089
location: join(308887..309188,309952..310552,310684..311004,311128..313805,313912..315628)
location: region:308887-315628:1
so has part: feature:308887-309188:1:exon
so has part: feature:309952-310552:1:exon
so has part: feature:310684-311004:1:exon
so has part: feature:311128-313805:1:exon
so has part: feature:313912-315628:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:308887-309188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:309952-310552:1:exon

position:310552:1
position: 310552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:310684-311004:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:311128-313805:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:313912-315628:1:exon

LOC104881089
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104881089
product: uncharacterized LOC104881089, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 220 samples with support for all annotated introns
transcript id: XM_010659914.2
SIO_010081: LOC104881089
subclass of: SO_0000673
so part of: LOC104881089
location: join(308887..309188,310464..310589,310684..311004,311128..313805,313912..315628)
location: region:308887-315628:1
so has part: feature:308887-309188:1:exon
so has part: feature:310464-310589:1:exon
so has part: feature:310684-311004:1:exon
so has part: feature:311128-313805:1:exon
so has part: feature:313912-315628:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:308887-309188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310464-310589:1:exon

position:310464:1
position: 310464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:310684-311004:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:311128-313805:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:313912-315628:1:exon

LOC104881089
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104881089
product: uncharacterized LOC104881089, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 99 samples with support for all annotated introns
transcript id: XM_019216267.1
SIO_010081: LOC104881089
subclass of: SO_0000673
so part of: LOC104881089
location: join(308887..309055,309135..309188,309952..310552,310684..311004,311128..313805,313912..315628)
location: region:308887-315628:1
so has part: feature:308887-309055:1:exon
so has part: feature:309135-309188:1:exon
so has part: feature:309952-310552:1:exon
so has part: feature:310684-311004:1:exon
so has part: feature:311128-313805:1:exon
so has part: feature:313912-315628:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:308887-309055:1:exon

position:309055:1
position: 309055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:309135-309188:1:exon

position:309135:1
position: 309135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:309952-310552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:310684-311004:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:311128-313805:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:313912-315628:1:exon

LOC104881089
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104881089
product: uncharacterized LOC104881089, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 140 samples with support for all annotated introns
transcript id: XM_019216265.1
SIO_010081: LOC104881089
subclass of: SO_0000673
so part of: LOC104881089
location: join(308887..309055,309135..309188,310464..310552,310684..311004,311128..313805,313912..315628)
location: region:308887-315628:1
so has part: feature:308887-309055:1:exon
so has part: feature:309135-309188:1:exon
so has part: feature:310464-310552:1:exon
so has part: feature:310684-311004:1:exon
so has part: feature:311128-313805:1:exon
so has part: feature:313912-315628:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:308887-309055:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:309135-309188:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:310464-310552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:310684-311004:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:311128-313805:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:313912-315628:1:exon

LOC104881089
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104881089
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC104881089 isoform X2
translation: MIHLCTCIEGSASSPGLSRKRAATTSCKTCGGKQLVNGRGSPPGSMLSTVGLELTSLINSDLTWKKASKGRSASRRARKPVARCSKAGGELVNKDPKRVAMPVSESEKLGVSVLGCRFSEKAEHIPIKKRRFLFRSPSPPSKNSSPRSEETTDDAAAASGTDLGKIVDTELDCDRKNLVKVNEFPGANEDFSGISILAAAACSSSMGGEDGFEEGVSRDGESSAHEGPLDVLVNNELCSLSKGFPMEDLVSSAKVSTEEAGSCSSPVPEKELAASSRTENSLLKCQAHGQNMEGTSFPDSHVTVSQDLLRNKDDETARTHESSLRDDRSHWDLNTAMDAWERPFEYQCCDPQFNVGDSISEDVDDGKTSDKMEKSEGCELERESGGTNGKILLPSDSSGLAQTQELNIEEHGSDSDSGINESICLQEKFVSSSEIINASKTDLPQELESLHNQEIISLDAGSVVSVPVEHDQGLSVCANVDENAPVQSVAFGSTGSGESLSSHQLASLDSCTDNSLSLNSNNLTSICISEGNDLAVSTGIAIVNDRNDCAAKTPKDSTIPSSSQAERQEAAPPHVAFSENSMYDSMDVQKEDAEDPGRKLSLSEGVHVHKGMISLETGEVRTVGDILENAVCKSDEVSFSQSSPTCAEMPSSEALLGGQPVVAEDAKEQHGKVSVDGTDANDTQVHIDTRELTKCSGKSAELLGASSGLSSHSECISASNDLMDHPDKMAGSGYDSDVSQDDPDPVVRIEKASELQMDYDSQYEDGELRESIEYTWEDLGGEDGEGEHVDYGSDNRDMAGFGASDYHVMLVKVEGAECKRQRVSNNKNLGSEPEQSCLGSSSMTKVVEAVSGKDDGAKCSSPCLSTRFSGKDDIDQFDASAEVNKETGARPDNVSGDHEIHVMEADAEEASQDDDLKMKISGWDLLPENCKSSSDIAMELGDGSGRKNISGDSVDGLNTEDTETRMVKSRTFKRELLSRIEGPVSGDVFLGKHRLCTQGSRSNDADDSNSRSERESGSVKSFGRSSYSLHIHSRGRGSEHWADYPDGHRAPRRHHSSGYRSITGFSFPGPENAAAVFTSRQSTSVSSHGVRRALRRSGSPAEGDEAFGMRLGLRPAGEISPDRHMGIGRERSLRYGPRLDDRGPRGRYDGHVLDGCIESSLNYSHPLAKRERSFSPIERRGDPSARQSHTKSPSRSRSRSPNTWQSPRGRNGAGVVGNPCLRHRSRSPSFRSGARVQRIRSPHQRSGFASDHMVGFMSMPRNHGSPPHNSRWIGDRKDGMVHFREHG
SIO_010081: LOC104881089
subclass of: SO_0000673
so part of: LOC104881089
location: join(310550..310552,310684..311004,311128..313805,313912..314773)
location: region:310550-314773:1
so has part: feature:310550-310552:1:exon
so has part: feature:310684-311004:1:exon
so has part: feature:311128-313805:1:exon
so has part: feature:313912-314773:1:exon

XP_019071804.1
type: Protein
SIO_000068: ncbiprotein

position:310550:1
position: 310550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314773:1
position: 314773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310550-310552:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310684-311004:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:311128-313805:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:313912-314773:1:exon

LOC104881089
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104881089
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC104881089 isoform X2
translation: MIHLCTCIEGSASSPGLSRKRAATTSCKTCGGKQLVNGRGSPPGSMLSTVGLELTSLINSDLTWKKASKGRSASRRARKPVARCSKAGGELVNKDPKRVAMPVSESEKLGVSVLGCRFSEKAEHIPIKKRRFLFRSPSPPSKNSSPRSEETTDDAAAASGTDLGKIVDTELDCDRKNLVKVNEFPGANEDFSGISILAAAACSSSMGGEDGFEEGVSRDGESSAHEGPLDVLVNNELCSLSKGFPMEDLVSSAKVSTEEAGSCSSPVPEKELAASSRTENSLLKCQAHGQNMEGTSFPDSHVTVSQDLLRNKDDETARTHESSLRDDRSHWDLNTAMDAWERPFEYQCCDPQFNVGDSISEDVDDGKTSDKMEKSEGCELERESGGTNGKILLPSDSSGLAQTQELNIEEHGSDSDSGINESICLQEKFVSSSEIINASKTDLPQELESLHNQEIISLDAGSVVSVPVEHDQGLSVCANVDENAPVQSVAFGSTGSGESLSSHQLASLDSCTDNSLSLNSNNLTSICISEGNDLAVSTGIAIVNDRNDCAAKTPKDSTIPSSSQAERQEAAPPHVAFSENSMYDSMDVQKEDAEDPGRKLSLSEGVHVHKGMISLETGEVRTVGDILENAVCKSDEVSFSQSSPTCAEMPSSEALLGGQPVVAEDAKEQHGKVSVDGTDANDTQVHIDTRELTKCSGKSAELLGASSGLSSHSECISASNDLMDHPDKMAGSGYDSDVSQDDPDPVVRIEKASELQMDYDSQYEDGELRESIEYTWEDLGGEDGEGEHVDYGSDNRDMAGFGASDYHVMLVKVEGAECKRQRVSNNKNLGSEPEQSCLGSSSMTKVVEAVSGKDDGAKCSSPCLSTRFSGKDDIDQFDASAEVNKETGARPDNVSGDHEIHVMEADAEEASQDDDLKMKISGWDLLPENCKSSSDIAMELGDGSGRKNISGDSVDGLNTEDTETRMVKSRTFKRELLSRIEGPVSGDVFLGKHRLCTQGSRSNDADDSNSRSERESGSVKSFGRSSYSLHIHSRGRGSEHWADYPDGHRAPRRHHSSGYRSITGFSFPGPENAAAVFTSRQSTSVSSHGVRRALRRSGSPAEGDEAFGMRLGLRPAGEISPDRHMGIGRERSLRYGPRLDDRGPRGRYDGHVLDGCIESSLNYSHPLAKRERSFSPIERRGDPSARQSHTKSPSRSRSRSPNTWQSPRGRNGAGVVGNPCLRHRSRSPSFRSGARVQRIRSPHQRSGFASDHMVGFMSMPRNHGSPPHNSRWIGDRKDGMVHFREHG
SIO_010081: LOC104881089
subclass of: SO_0000673
so part of: LOC104881089
location: join(310550..310552,310684..311004,311128..313805,313912..314773)
location: region:310550-314773:1
so has part: feature:310550-310552:1:exon
so has part: feature:310684-311004:1:exon
so has part: feature:311128-313805:1:exon
so has part: feature:313912-314773:1:exon

XP_019071810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310550-310552:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310684-311004:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:311128-313805:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:313912-314773:1:exon

LOC104881089
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104881089
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC104881089 isoform X2
translation: MIHLCTCIEGSASSPGLSRKRAATTSCKTCGGKQLVNGRGSPPGSMLSTVGLELTSLINSDLTWKKASKGRSASRRARKPVARCSKAGGELVNKDPKRVAMPVSESEKLGVSVLGCRFSEKAEHIPIKKRRFLFRSPSPPSKNSSPRSEETTDDAAAASGTDLGKIVDTELDCDRKNLVKVNEFPGANEDFSGISILAAAACSSSMGGEDGFEEGVSRDGESSAHEGPLDVLVNNELCSLSKGFPMEDLVSSAKVSTEEAGSCSSPVPEKELAASSRTENSLLKCQAHGQNMEGTSFPDSHVTVSQDLLRNKDDETARTHESSLRDDRSHWDLNTAMDAWERPFEYQCCDPQFNVGDSISEDVDDGKTSDKMEKSEGCELERESGGTNGKILLPSDSSGLAQTQELNIEEHGSDSDSGINESICLQEKFVSSSEIINASKTDLPQELESLHNQEIISLDAGSVVSVPVEHDQGLSVCANVDENAPVQSVAFGSTGSGESLSSHQLASLDSCTDNSLSLNSNNLTSICISEGNDLAVSTGIAIVNDRNDCAAKTPKDSTIPSSSQAERQEAAPPHVAFSENSMYDSMDVQKEDAEDPGRKLSLSEGVHVHKGMISLETGEVRTVGDILENAVCKSDEVSFSQSSPTCAEMPSSEALLGGQPVVAEDAKEQHGKVSVDGTDANDTQVHIDTRELTKCSGKSAELLGASSGLSSHSECISASNDLMDHPDKMAGSGYDSDVSQDDPDPVVRIEKASELQMDYDSQYEDGELRESIEYTWEDLGGEDGEGEHVDYGSDNRDMAGFGASDYHVMLVKVEGAECKRQRVSNNKNLGSEPEQSCLGSSSMTKVVEAVSGKDDGAKCSSPCLSTRFSGKDDIDQFDASAEVNKETGARPDNVSGDHEIHVMEADAEEASQDDDLKMKISGWDLLPENCKSSSDIAMELGDGSGRKNISGDSVDGLNTEDTETRMVKSRTFKRELLSRIEGPVSGDVFLGKHRLCTQGSRSNDADDSNSRSERESGSVKSFGRSSYSLHIHSRGRGSEHWADYPDGHRAPRRHHSSGYRSITGFSFPGPENAAAVFTSRQSTSVSSHGVRRALRRSGSPAEGDEAFGMRLGLRPAGEISPDRHMGIGRERSLRYGPRLDDRGPRGRYDGHVLDGCIESSLNYSHPLAKRERSFSPIERRGDPSARQSHTKSPSRSRSRSPNTWQSPRGRNGAGVVGNPCLRHRSRSPSFRSGARVQRIRSPHQRSGFASDHMVGFMSMPRNHGSPPHNSRWIGDRKDGMVHFREHG
SIO_010081: LOC104881089
subclass of: SO_0000673
so part of: LOC104881089
location: join(310550..310552,310684..311004,311128..313805,313912..314773)
location: region:310550-314773:1
so has part: feature:310550-310552:1:exon
so has part: feature:310684-311004:1:exon
so has part: feature:311128-313805:1:exon
so has part: feature:313912-314773:1:exon

XP_019071812.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310550-310552:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310684-311004:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:311128-313805:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:313912-314773:1:exon

LOC104881089
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104881089
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC104881089 isoform X1
translation: MIHLCTCIEGSASSPGLSRKRAATTSCKTCGGKQLVNGRGSPPGSMLSTVGLELTSLINSDLTWKKASKGRSASRRARKPVARCSKAGGELVNKDPKRVAMPVSESEKLGVSVLGCRFSEKAEHIPIKKRRFLFRSPSPPSKNSSPRSEETTDDAAAASGTDLGKIVDTELDCDRKNLVKVNEFPGANEDFSGISILAAAACSSSMGGEDGFEEGVSRDGESSAHEGPLDVLVNNELCSLSKGFPMEDLVSSAKVSTEEAGSCSSPVPEKELAASSRTENSLLKCQAHGQNMEGTSFPDSHVTVSQDLLRNKDDETARTHESSLRDDRSHWDLNTAMDAWERPFEYQCCDPQFNVGDSISEDVDDGKTSDKMEKSEGCELERESGGTNGKILLPSDSSGLAQTQELNIEEHGSDSDSGINESICLQEKFVSSSEIINASKTDLPQELESLHNQEIISLDAGSVVSVPVEHDQGLSVCANVDENAPVQSVAFGSTGSGESLSSHQLASLDSCTDNSLSLNSNNLTSICISEGNDLAVSTGIAIVNDRNDCAAKTPKDSTIPSSSQAERQEAAPPHVAFSENSMYDSMDVQKEDAEDPGRKLSLSEGVHVHKGMISLETGEVRTVGDILENAVCKSDEVSFSQSSPTCAEMPSSEALLGGQPVVAEDAKEQHGKVSVDGTDANDTQVHIDTRELTKCSGKSAELLGASSGLSSHSECISASNDLMDHPDKMAGSGYDSDVSQDDPDPVVRIEKASELQMDYDSQYEDGELRESIEYTWEDLGGEDGEGEHVDYGSDNRDMAGFGASDYHVMLVKVEGAECKRQRVSNNKNLGSEPEQSCLGSSSMTKVVEAVSGKDDGAKCSSPCLSTRFSGKDDIDQFDASAEVNKETGARPDNVSGDHEIHVMEADAEEASQDDDLKMKISGWDLLPENCKSSSDIAMELGDGSGRKNISGDSVDGLNTEDTETRMVKSRTFKRELLSRIEGPVSGDVFLGKHRLCTQGSRSNDADDSNSRSERESGSVKSFGRSSYSLHIHSRGRGSEHWADYPDGHRAPRRHHSSGYRSITGFSFPGPENAAAVFTSRQSTSVSSHGVRRALRRSGSPAEGDEAFGMRLGLRPAGEISPDRHMGIGRERSLRYGPRLDDRGPRGRYDGHVLDGCIESSLNYSHPLAKRERSFSPIERRGDPSARQSHTKSPSRSRSRSPNTWQSPRGRNGAGVVGNPCLRHRSRSPSFRSGARVQRIRSPHQRSGFASDHMVGFMSMPRNHGSPPHNSRWIGDRKDGMVHFREHG
SIO_010081: LOC104881089
subclass of: SO_0000673
so part of: LOC104881089
location: join(310587..310589,310684..311004,311128..313805,313912..314773)
location: region:310587-314773:1
so has part: feature:310587-310589:1:exon
so has part: feature:310684-311004:1:exon
so has part: feature:311128-313805:1:exon
so has part: feature:313912-314773:1:exon

XP_019071809.1
type: Protein
SIO_000068: ncbiprotein

position:310587:1
position: 310587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310587-310589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310684-311004:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:311128-313805:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:313912-314773:1:exon

LOC104881089
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104881089
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC104881089 isoform X1
translation: MIHLCTCIEGSASSPGLSRKRAATTSCKTCGGKQLVNGRGSPPGSMLSTVGLELTSLINSDLTWKKASKGRSASRRARKPVARCSKAGGELVNKDPKRVAMPVSESEKLGVSVLGCRFSEKAEHIPIKKRRFLFRSPSPPSKNSSPRSEETTDDAAAASGTDLGKIVDTELDCDRKNLVKVNEFPGANEDFSGISILAAAACSSSMGGEDGFEEGVSRDGESSAHEGPLDVLVNNELCSLSKGFPMEDLVSSAKVSTEEAGSCSSPVPEKELAASSRTENSLLKCQAHGQNMEGTSFPDSHVTVSQDLLRNKDDETARTHESSLRDDRSHWDLNTAMDAWERPFEYQCCDPQFNVGDSISEDVDDGKTSDKMEKSEGCELERESGGTNGKILLPSDSSGLAQTQELNIEEHGSDSDSGINESICLQEKFVSSSEIINASKTDLPQELESLHNQEIISLDAGSVVSVPVEHDQGLSVCANVDENAPVQSVAFGSTGSGESLSSHQLASLDSCTDNSLSLNSNNLTSICISEGNDLAVSTGIAIVNDRNDCAAKTPKDSTIPSSSQAERQEAAPPHVAFSENSMYDSMDVQKEDAEDPGRKLSLSEGVHVHKGMISLETGEVRTVGDILENAVCKSDEVSFSQSSPTCAEMPSSEALLGGQPVVAEDAKEQHGKVSVDGTDANDTQVHIDTRELTKCSGKSAELLGASSGLSSHSECISASNDLMDHPDKMAGSGYDSDVSQDDPDPVVRIEKASELQMDYDSQYEDGELRESIEYTWEDLGGEDGEGEHVDYGSDNRDMAGFGASDYHVMLVKVEGAECKRQRVSNNKNLGSEPEQSCLGSSSMTKVVEAVSGKDDGAKCSSPCLSTRFSGKDDIDQFDASAEVNKETGARPDNVSGDHEIHVMEADAEEASQDDDLKMKISGWDLLPENCKSSSDIAMELGDGSGRKNISGDSVDGLNTEDTETRMVKSRTFKRELLSRIEGPVSGDVFLGKHRLCTQGSRSNDADDSNSRSERESGSVKSFGRSSYSLHIHSRGRGSEHWADYPDGHRAPRRHHSSGYRSITGFSFPGPENAAAVFTSRQSTSVSSHGVRRALRRSGSPAEGDEAFGMRLGLRPAGEISPDRHMGIGRERSLRYGPRLDDRGPRGRYDGHVLDGCIESSLNYSHPLAKRERSFSPIERRGDPSARQSHTKSPSRSRSRSPNTWQSPRGRNGAGVVGNPCLRHRSRSPSFRSGARVQRIRSPHQRSGFASDHMVGFMSMPRNHGSPPHNSRWIGDRKDGMVHFREHG
SIO_010081: LOC104881089
subclass of: SO_0000673
so part of: LOC104881089
location: join(310587..310589,310684..311004,311128..313805,313912..314773)
location: region:310587-314773:1
so has part: feature:310587-310589:1:exon
so has part: feature:310684-311004:1:exon
so has part: feature:311128-313805:1:exon
so has part: feature:313912-314773:1:exon

XP_010658216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310587-310589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310684-311004:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:311128-313805:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:313912-314773:1:exon

LOC100258700
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100258700
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(316828..321071)
location: region:316828-321071:-1
so has part: feature:316828-321071:-1:exon
subclass of: SO_0000010

100258700
type: Gene
SIO_000068: ncbigene

position:316828:-1
position: 316828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321071:-1
position: 321071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316828-321071:-1:exon

LOC100258700
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100258700
product: phosphoglycerate mutase-like protein AT74
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 144 samples with support for all annotated introns
transcript id: XM_002273209.3
SIO_010081: LOC100258700
subclass of: SO_0000673
so part of: LOC100258700
location: complement(join(316828..317413,317539..317619,318623..318836,318910..319029,320415..321071))
location: region:316828-321071:-1
so has part: feature:320415-321071:-1:exon
so has part: feature:318910-319029:-1:exon
so has part: feature:318623-318836:-1:exon
so has part: feature:317539-317619:-1:exon
so has part: feature:316828-317413:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:320415-321071:-1:exon

position:320415:-1
position: 320415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:318910-319029:-1:exon

position:318910:-1
position: 318910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319029:-1
position: 319029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:318623-318836:-1:exon

position:318623:-1
position: 318623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318836:-1
position: 318836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:317539-317619:-1:exon

position:317539:-1
position: 317539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317619:-1
position: 317619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:316828-317413:-1:exon

position:317413:-1
position: 317413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100258700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100258700
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoglycerate mutase-like protein AT74
translation: MATFYLTLNPASFLAVSSQKRLSSNSIQCCQDTNGQPRPRVTHEPSDNWLTSFPEKNPIISSPTVLPPRPRRIILVRHGQSEGNVDESVYTQVPDPKIKLTEKGMAQAEECGKNIRKMIEKDGVDDWKVYFYVSPYRRTLETLRCLARAFKRRRIAGWREEPRLREQDFGNFQDREKMRIEKATRVLYGRFFYRFPNGESAADVYDRITGFRETLRADIDIGRFQPPGERNPNMNLVIVSHGLTLRVFLMRWYKWTVEQFEGLNNLGNGDMIVMEKGYGGRYSLLMHHTEEELRNFGLTEEMLIDQEWQKIAKPGELNYDCLITGPSFFTHFEDEDNET
SIO_010081: LOC100258700
subclass of: SO_0000673
so part of: LOC100258700
location: complement(join(317317..317413,317539..317619,318623..318836,318910..319029,320415..320922))
location: region:317317-320922:-1
so has part: feature:320415-320922:-1:exon
so has part: feature:318910-319029:-1:exon
so has part: feature:318623-318836:-1:exon
so has part: feature:317539-317619:-1:exon
so has part: feature:317317-317413:-1:exon

XP_002273245.1
type: Protein
SIO_000068: ncbiprotein

position:317317:-1
position: 317317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320922:-1
position: 320922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320415-320922:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:318910-319029:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:318623-318836:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:317539-317619:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:317317-317413:-1:exon

LOC100262204
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100262204
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 329961..334585
location: region:329961-334585:1
so has part: feature:329961-334585:1:exon
subclass of: SO_0000010

100262204
type: Gene
SIO_000068: ncbigene

position:329961:1
position: 329961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334585:1
position: 334585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329961-334585:1:exon

LOC100262204
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100262204
product: homeobox protein BEL1 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 240 samples with support for all annotated introns
transcript id: XM_002279194.4
SIO_010081: LOC100262204
subclass of: SO_0000673
so part of: LOC100262204
location: join(329961..330892,331089..332071,332487..332869,333378..333438,333615..334585)
location: region:329961-334585:1
so has part: feature:329961-330892:1:exon
so has part: feature:331089-332071:1:exon
so has part: feature:332487-332869:1:exon
so has part: feature:333378-333438:1:exon
so has part: feature:333615-334585:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:329961-330892:1:exon

position:330892:1
position: 330892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:331089-332071:1:exon

position:331089:1
position: 331089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332071:1
position: 332071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:332487-332869:1:exon

position:332487:1
position: 332487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332869:1
position: 332869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:333378-333438:1:exon

position:333378:1
position: 333378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333438:1
position: 333438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:333615-334585:1:exon

position:333615:1
position: 333615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100262204
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100262204
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein BEL1 homolog
translation: MAGENPAEKSRNMVSSAGFVYSDVSSTNPSIQTQTHLVNQIQSFESNPEMFNLTTGMEMIGFPPKNLQQPSDANSVMWKAFFGKHGNHSGPSSSKTVNESTSDYYQHEFNKSDFATGISQTTSENLMVAPDSAAWQENRLMVDDSSLRCVFPCEGNERPSQGLSLSLSSSNPSSIGLQSFELRHTHHQGQQDDHMRFLSSNSRDCFFGKSAAIQEQQMMQDGFLGKAANLNQGNFQLRNSKYLGPAQQLLNECCNLGTKQIDPPRQKAPKTNQWEDENGSSSSCSRKPSLYSLELMELQKRKSKLLSMLEEVDRRYKHYCDQMKAVVSSFEAVAGNGAARVYSALASKAMSRHFRCLRDGIVGQIQATKKAMGEKDPVAPGTTRGETPRLRVLDQALRQQRAFQQMSMMESHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEEMYLEETKEQDNLGSPDGATDPDDNGRPNPNPQPRIEDQKPTAEQLVRIDSECLSSIINNPEKNDSKNGKSLQNPHPHHLHHHQPNFGRVAEAFGAVELDFSSYNHHTAGAVSFTNDSAHHNFGGSGVSLTLGLQQHGGSGVSLAFSPASQSSLFYSRDPIEDCQPVQYSLLDGEGQNLPYRNLMGAQLLHDLAG
SIO_010081: LOC100262204
subclass of: SO_0000673
so part of: LOC100262204
location: join(331139..332071,332487..332869,333378..333438,333615..334256)
location: region:331139-334256:1
so has part: feature:331139-332071:1:exon
so has part: feature:332487-332869:1:exon
so has part: feature:333378-333438:1:exon
so has part: feature:333615-334256:1:exon

XP_002279230.2
type: Protein
SIO_000068: ncbiprotein

position:331139:1
position: 331139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334256:1
position: 334256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331139-332071:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:332487-332869:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:333378-333438:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:333615-334256:1:exon

LOC100267372
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100267372
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(343032..346161)
location: region:343032-346161:-1
so has part: feature:343032-346161:-1:exon
subclass of: SO_0000010

100267372
type: Gene
SIO_000068: ncbigene

position:343032:-1
position: 343032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346161:-1
position: 346161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343032-346161:-1:exon

LOC100267372
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100267372
product: uncharacterized LOC100267372
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 237 samples with support for all annotated introns
transcript id: XM_002279151.3
SIO_010081: LOC100267372
subclass of: SO_0000673
so part of: LOC100267372
location: complement(join(343032..343372,343539..344081,344986..346161))
location: region:343032-346161:-1
so has part: feature:344986-346161:-1:exon
so has part: feature:343539-344081:-1:exon
so has part: feature:343032-343372:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:344986-346161:-1:exon

position:344986:-1
position: 344986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:343539-344081:-1:exon

position:343539:-1
position: 343539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344081:-1
position: 344081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:343032-343372:-1:exon

position:343372:-1
position: 343372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100267372
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100267372
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100267372
translation: MKVNQKDSEKVGWDQMRGSSGNPIAVPVAQARTLPKLMVWLILFVSVTYVVYTLKLVSTSRACDDDLLITPPLMTVLSSEANVTMGAATAEGIRNQTSTTVALRREIPEAHKRTELRHIVFGIAASAKLWDQRKNYIKLWWKPKEMRGIVWLDNQVKTRSDEGLPPVRISGDTSRFSYTNKQGHPSAIRISRIVSETFRLRMKDVRWFVMGDDDTVFITENLVRLLAKYDHNQYYYIGSLSESHLQNIYFSYSMAYGGGGFAISYPLARALERMQDRCIQRYPGLYGSDDRMQACMAELGVPLTKELGFHQYDVYGNLFGLLAAHPVTPLVSLHHLDVVEPIFPNVTRVEALKQLMVPMKLDSAGLMQQSICYDKAKGWTISVSWGFAVQIFRGIFSPREIEMPSRTFLNWYRKADYTAYAFNTRPVSRNPCQKPFVFYLSRARFDSSMNQTVSEYARHRVPHPLCRWKMADPADIDRVEVYKKPDPHLWQRSPRRNCCRILDSKKRSAKNMAIDVGVCREGEISEI
SIO_010081: LOC100267372
subclass of: SO_0000673
so part of: LOC100267372
location: complement(join(343265..343372,343539..344081,344986..345918))
location: region:343265-345918:-1
so has part: feature:344986-345918:-1:exon
so has part: feature:343539-344081:-1:exon
so has part: feature:343265-343372:-1:exon

XP_002279187.1
type: Protein
SIO_000068: ncbiprotein

position:343265:-1
position: 343265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345918:-1
position: 345918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344986-345918:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:343539-344081:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:343265-343372:-1:exon

LOC104881090
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC104881090
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 349382..354302
location: region:349382-354302:1
so has part: feature:349382-354302:1:exon
subclass of: SO_0000010

104881090
type: Gene
SIO_000068: ncbigene

position:349382:1
position: 349382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354302:1
position: 354302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349382-354302:1:exon

LOC104881090
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104881090
product: pentatricopeptide repeat-containing protein At2g13600, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_010659946.2
SIO_010081: LOC104881090
subclass of: SO_0000673
so part of: LOC104881090
location: join(349382..351989,352714..354302)
location: region:349382-354302:1
so has part: feature:349382-351989:1:exon
so has part: feature:352714-354302:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:349382-351989:1:exon

position:351989:1
position: 351989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:352714-354302:1:exon

position:352714:1
position: 352714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104881090
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104881090
product: pentatricopeptide repeat-containing protein At2g13600, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_019216286.1
SIO_010081: LOC104881090
subclass of: SO_0000673
so part of: LOC104881090
location: join(349382..351989,352714..353526,353614..354302)
location: region:349382-354302:1
so has part: feature:349382-351989:1:exon
so has part: feature:352714-353526:1:exon
so has part: feature:353614-354302:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:349382-351989:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:352714-353526:1:exon

position:353526:1
position: 353526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:353614-354302:1:exon

position:353614:1
position: 353614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104881090
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104881090
product: pentatricopeptide repeat-containing protein At2g13600, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_010659950.2
SIO_010081: LOC104881090
subclass of: SO_0000673
so part of: LOC104881090
location: join(349382..351989,352714..352832,353339..354302)
location: region:349382-354302:1
so has part: feature:349382-351989:1:exon
so has part: feature:352714-352832:1:exon
so has part: feature:353339-354302:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:349382-351989:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:352714-352832:1:exon

position:352832:1
position: 352832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:353339-354302:1:exon

position:353339:1
position: 353339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104881090
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104881090
product: pentatricopeptide repeat-containing protein At2g13600, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
transcript id: XM_010659953.2
SIO_010081: LOC104881090
subclass of: SO_0000673
so part of: LOC104881090
location: join(349382..351989,352714..352832,353354..354302)
location: region:349382-354302:1
so has part: feature:349382-351989:1:exon
so has part: feature:352714-352832:1:exon
so has part: feature:353354-354302:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:349382-351989:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:352714-352832:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:353354-354302:1:exon

position:353354:1
position: 353354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104881090
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104881090
product: pentatricopeptide repeat-containing protein At2g13600, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_010659968.2
SIO_010081: LOC104881090
subclass of: SO_0000673
so part of: LOC104881090
location: join(349382..351989,352714..352740,353354..354302)
location: region:349382-354302:1
so has part: feature:349382-351989:1:exon
so has part: feature:352714-352740:1:exon
so has part: feature:353354-354302:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:349382-351989:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:352714-352740:1:exon

position:352740:1
position: 352740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:353354-354302:1:exon

LOC104881090
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104881090
product: pentatricopeptide repeat-containing protein At2g13600, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_010659956.2
SIO_010081: LOC104881090
subclass of: SO_0000673
so part of: LOC104881090
location: join(349382..351989,352741..354302)
location: region:349382-354302:1
so has part: feature:349382-351989:1:exon
so has part: feature:352741-354302:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:349382-351989:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:352741-354302:1:exon

position:352741:1
position: 352741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104881090
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104881090
product: pentatricopeptide repeat-containing protein At2g13600, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_010659963.2
SIO_010081: LOC104881090
subclass of: SO_0000673
so part of: LOC104881090
location: join(349382..351989,353339..354302)
location: region:349382-354302:1
so has part: feature:349382-351989:1:exon
so has part: feature:353339-354302:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:349382-351989:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:353339-354302:1:exon

LOC104881090
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104881090
product: pentatricopeptide repeat-containing protein At2g13600, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 76 samples with support for all annotated introns
transcript id: XM_010659972.2
SIO_010081: LOC104881090
subclass of: SO_0000673
so part of: LOC104881090
location: join(349382..351989,353354..354302)
location: region:349382-354302:1
so has part: feature:349382-351989:1:exon
so has part: feature:353354-354302:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:349382-351989:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:353354-354302:1:exon

LOC104881090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104881090
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein At2g13600
translation: MKGLATHSDALQSIKTLVLKRLYPQALRASASLLHPPLTDQSYALFLKSGFALDAFLSSFIVNRFAISGDFARARRFLLDTPYPDTVSWNSLISGYARFRQPGPVFDLFNGLRRSGLSPDEFSLSSLVKGCGVLEQNEVAHGVCLKMGLLNGFVVSGLLDGYAKLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNGEFEKGREVFVEMRGLGLGLELNEFSLTSVLGALSDVREGEQVFGLSVKMGLLCGCSIHLNNALMNMYSRCGSKSDAIKMFDEMTEPDVVSWTERIGAAYDAIEAFELFRLVLSGNMEVNEYMLINVLSAMREPKLLKSGRQIQGLCQKAGYLLVASVNNALIFMYGKCGEMVAARHIFDEMLCGDSVSWNSLIAGYAENGLMKQALKVFSQMRDYLLQPNKYTLASILEVAANSNFPEQAMQIHSYIVKLGFIVDDSMLSCLITAYGKCNMICESKRVYSDISQINVLHLNAMAATLVHAGCHADALKLFQTGWRLHQEVDCITLSIVLKACGALTDLEYGRNIHSMALKSGMSQDNFVESAVIDVYCKCGTVDEAAKTFMNVSKNNLVAWNAMVMGYAQHGCYHEVFELFNKMLELGIQPDEITYLGVLNSCCHAGLVNEAHTYLSSMLELHGVVPCLEHYACMIDLFGRVGLLEDAKRTIDQMPIMPDAQIWQILLSGCNIHGNVDLGEVAAKKLIELQPENDSAYVLLSNLYASAGRWNAVGKLRRVMKKKIICKEPGSSWIQVRGSVHYFFASDTSHPESKEIYMKLQRLYEEMFASPYLEQDRPVNYDPIQF
SIO_010081: LOC104881090
subclass of: SO_0000673
so part of: LOC104881090
location: 349466..351910
location: region:349466-351910:1
so has part: feature:349466-351910:1:exon

XP_019071831.1
type: Protein
SIO_000068: ncbiprotein

position:349466:1
position: 349466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351910:1
position: 351910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349466-351910:1:exon

LOC104881090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104881090
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein At2g13600
translation: MKGLATHSDALQSIKTLVLKRLYPQALRASASLLHPPLTDQSYALFLKSGFALDAFLSSFIVNRFAISGDFARARRFLLDTPYPDTVSWNSLISGYARFRQPGPVFDLFNGLRRSGLSPDEFSLSSLVKGCGVLEQNEVAHGVCLKMGLLNGFVVSGLLDGYAKLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNGEFEKGREVFVEMRGLGLGLELNEFSLTSVLGALSDVREGEQVFGLSVKMGLLCGCSIHLNNALMNMYSRCGSKSDAIKMFDEMTEPDVVSWTERIGAAYDAIEAFELFRLVLSGNMEVNEYMLINVLSAMREPKLLKSGRQIQGLCQKAGYLLVASVNNALIFMYGKCGEMVAARHIFDEMLCGDSVSWNSLIAGYAENGLMKQALKVFSQMRDYLLQPNKYTLASILEVAANSNFPEQAMQIHSYIVKLGFIVDDSMLSCLITAYGKCNMICESKRVYSDISQINVLHLNAMAATLVHAGCHADALKLFQTGWRLHQEVDCITLSIVLKACGALTDLEYGRNIHSMALKSGMSQDNFVESAVIDVYCKCGTVDEAAKTFMNVSKNNLVAWNAMVMGYAQHGCYHEVFELFNKMLELGIQPDEITYLGVLNSCCHAGLVNEAHTYLSSMLELHGVVPCLEHYACMIDLFGRVGLLEDAKRTIDQMPIMPDAQIWQILLSGCNIHGNVDLGEVAAKKLIELQPENDSAYVLLSNLYASAGRWNAVGKLRRVMKKKIICKEPGSSWIQVRGSVHYFFASDTSHPESKEIYMKLQRLYEEMFASPYLEQDRPVNYDPIQF
SIO_010081: LOC104881090
subclass of: SO_0000673
so part of: LOC104881090
location: 349466..351910
location: region:349466-351910:1
so has part: feature:349466-351910:1:exon

XP_010658248.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:349466-351910:1:exon

LOC104881090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104881090
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein At2g13600
translation: MKGLATHSDALQSIKTLVLKRLYPQALRASASLLHPPLTDQSYALFLKSGFALDAFLSSFIVNRFAISGDFARARRFLLDTPYPDTVSWNSLISGYARFRQPGPVFDLFNGLRRSGLSPDEFSLSSLVKGCGVLEQNEVAHGVCLKMGLLNGFVVSGLLDGYAKLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNGEFEKGREVFVEMRGLGLGLELNEFSLTSVLGALSDVREGEQVFGLSVKMGLLCGCSIHLNNALMNMYSRCGSKSDAIKMFDEMTEPDVVSWTERIGAAYDAIEAFELFRLVLSGNMEVNEYMLINVLSAMREPKLLKSGRQIQGLCQKAGYLLVASVNNALIFMYGKCGEMVAARHIFDEMLCGDSVSWNSLIAGYAENGLMKQALKVFSQMRDYLLQPNKYTLASILEVAANSNFPEQAMQIHSYIVKLGFIVDDSMLSCLITAYGKCNMICESKRVYSDISQINVLHLNAMAATLVHAGCHADALKLFQTGWRLHQEVDCITLSIVLKACGALTDLEYGRNIHSMALKSGMSQDNFVESAVIDVYCKCGTVDEAAKTFMNVSKNNLVAWNAMVMGYAQHGCYHEVFELFNKMLELGIQPDEITYLGVLNSCCHAGLVNEAHTYLSSMLELHGVVPCLEHYACMIDLFGRVGLLEDAKRTIDQMPIMPDAQIWQILLSGCNIHGNVDLGEVAAKKLIELQPENDSAYVLLSNLYASAGRWNAVGKLRRVMKKKIICKEPGSSWIQVRGSVHYFFASDTSHPESKEIYMKLQRLYEEMFASPYLEQDRPVNYDPIQF
SIO_010081: LOC104881090
subclass of: SO_0000673
so part of: LOC104881090
location: 349466..351910
location: region:349466-351910:1
so has part: feature:349466-351910:1:exon

XP_010658252.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:349466-351910:1:exon

LOC104881090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104881090
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein At2g13600
translation: MKGLATHSDALQSIKTLVLKRLYPQALRASASLLHPPLTDQSYALFLKSGFALDAFLSSFIVNRFAISGDFARARRFLLDTPYPDTVSWNSLISGYARFRQPGPVFDLFNGLRRSGLSPDEFSLSSLVKGCGVLEQNEVAHGVCLKMGLLNGFVVSGLLDGYAKLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNGEFEKGREVFVEMRGLGLGLELNEFSLTSVLGALSDVREGEQVFGLSVKMGLLCGCSIHLNNALMNMYSRCGSKSDAIKMFDEMTEPDVVSWTERIGAAYDAIEAFELFRLVLSGNMEVNEYMLINVLSAMREPKLLKSGRQIQGLCQKAGYLLVASVNNALIFMYGKCGEMVAARHIFDEMLCGDSVSWNSLIAGYAENGLMKQALKVFSQMRDYLLQPNKYTLASILEVAANSNFPEQAMQIHSYIVKLGFIVDDSMLSCLITAYGKCNMICESKRVYSDISQINVLHLNAMAATLVHAGCHADALKLFQTGWRLHQEVDCITLSIVLKACGALTDLEYGRNIHSMALKSGMSQDNFVESAVIDVYCKCGTVDEAAKTFMNVSKNNLVAWNAMVMGYAQHGCYHEVFELFNKMLELGIQPDEITYLGVLNSCCHAGLVNEAHTYLSSMLELHGVVPCLEHYACMIDLFGRVGLLEDAKRTIDQMPIMPDAQIWQILLSGCNIHGNVDLGEVAAKKLIELQPENDSAYVLLSNLYASAGRWNAVGKLRRVMKKKIICKEPGSSWIQVRGSVHYFFASDTSHPESKEIYMKLQRLYEEMFASPYLEQDRPVNYDPIQF
SIO_010081: LOC104881090
subclass of: SO_0000673
so part of: LOC104881090
location: 349466..351910
location: region:349466-351910:1
so has part: feature:349466-351910:1:exon

XP_010658255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:349466-351910:1:exon

LOC104881090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104881090
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein At2g13600
translation: MKGLATHSDALQSIKTLVLKRLYPQALRASASLLHPPLTDQSYALFLKSGFALDAFLSSFIVNRFAISGDFARARRFLLDTPYPDTVSWNSLISGYARFRQPGPVFDLFNGLRRSGLSPDEFSLSSLVKGCGVLEQNEVAHGVCLKMGLLNGFVVSGLLDGYAKLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNGEFEKGREVFVEMRGLGLGLELNEFSLTSVLGALSDVREGEQVFGLSVKMGLLCGCSIHLNNALMNMYSRCGSKSDAIKMFDEMTEPDVVSWTERIGAAYDAIEAFELFRLVLSGNMEVNEYMLINVLSAMREPKLLKSGRQIQGLCQKAGYLLVASVNNALIFMYGKCGEMVAARHIFDEMLCGDSVSWNSLIAGYAENGLMKQALKVFSQMRDYLLQPNKYTLASILEVAANSNFPEQAMQIHSYIVKLGFIVDDSMLSCLITAYGKCNMICESKRVYSDISQINVLHLNAMAATLVHAGCHADALKLFQTGWRLHQEVDCITLSIVLKACGALTDLEYGRNIHSMALKSGMSQDNFVESAVIDVYCKCGTVDEAAKTFMNVSKNNLVAWNAMVMGYAQHGCYHEVFELFNKMLELGIQPDEITYLGVLNSCCHAGLVNEAHTYLSSMLELHGVVPCLEHYACMIDLFGRVGLLEDAKRTIDQMPIMPDAQIWQILLSGCNIHGNVDLGEVAAKKLIELQPENDSAYVLLSNLYASAGRWNAVGKLRRVMKKKIICKEPGSSWIQVRGSVHYFFASDTSHPESKEIYMKLQRLYEEMFASPYLEQDRPVNYDPIQF
SIO_010081: LOC104881090
subclass of: SO_0000673
so part of: LOC104881090
location: 349466..351910
location: region:349466-351910:1
so has part: feature:349466-351910:1:exon

XP_010658258.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:349466-351910:1:exon

LOC104881090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104881090
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein At2g13600
translation: MKGLATHSDALQSIKTLVLKRLYPQALRASASLLHPPLTDQSYALFLKSGFALDAFLSSFIVNRFAISGDFARARRFLLDTPYPDTVSWNSLISGYARFRQPGPVFDLFNGLRRSGLSPDEFSLSSLVKGCGVLEQNEVAHGVCLKMGLLNGFVVSGLLDGYAKLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNGEFEKGREVFVEMRGLGLGLELNEFSLTSVLGALSDVREGEQVFGLSVKMGLLCGCSIHLNNALMNMYSRCGSKSDAIKMFDEMTEPDVVSWTERIGAAYDAIEAFELFRLVLSGNMEVNEYMLINVLSAMREPKLLKSGRQIQGLCQKAGYLLVASVNNALIFMYGKCGEMVAARHIFDEMLCGDSVSWNSLIAGYAENGLMKQALKVFSQMRDYLLQPNKYTLASILEVAANSNFPEQAMQIHSYIVKLGFIVDDSMLSCLITAYGKCNMICESKRVYSDISQINVLHLNAMAATLVHAGCHADALKLFQTGWRLHQEVDCITLSIVLKACGALTDLEYGRNIHSMALKSGMSQDNFVESAVIDVYCKCGTVDEAAKTFMNVSKNNLVAWNAMVMGYAQHGCYHEVFELFNKMLELGIQPDEITYLGVLNSCCHAGLVNEAHTYLSSMLELHGVVPCLEHYACMIDLFGRVGLLEDAKRTIDQMPIMPDAQIWQILLSGCNIHGNVDLGEVAAKKLIELQPENDSAYVLLSNLYASAGRWNAVGKLRRVMKKKIICKEPGSSWIQVRGSVHYFFASDTSHPESKEIYMKLQRLYEEMFASPYLEQDRPVNYDPIQF
SIO_010081: LOC104881090
subclass of: SO_0000673
so part of: LOC104881090
location: 349466..351910
location: region:349466-351910:1
so has part: feature:349466-351910:1:exon

XP_010658265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:349466-351910:1:exon

LOC104881090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104881090
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein At2g13600
translation: MKGLATHSDALQSIKTLVLKRLYPQALRASASLLHPPLTDQSYALFLKSGFALDAFLSSFIVNRFAISGDFARARRFLLDTPYPDTVSWNSLISGYARFRQPGPVFDLFNGLRRSGLSPDEFSLSSLVKGCGVLEQNEVAHGVCLKMGLLNGFVVSGLLDGYAKLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNGEFEKGREVFVEMRGLGLGLELNEFSLTSVLGALSDVREGEQVFGLSVKMGLLCGCSIHLNNALMNMYSRCGSKSDAIKMFDEMTEPDVVSWTERIGAAYDAIEAFELFRLVLSGNMEVNEYMLINVLSAMREPKLLKSGRQIQGLCQKAGYLLVASVNNALIFMYGKCGEMVAARHIFDEMLCGDSVSWNSLIAGYAENGLMKQALKVFSQMRDYLLQPNKYTLASILEVAANSNFPEQAMQIHSYIVKLGFIVDDSMLSCLITAYGKCNMICESKRVYSDISQINVLHLNAMAATLVHAGCHADALKLFQTGWRLHQEVDCITLSIVLKACGALTDLEYGRNIHSMALKSGMSQDNFVESAVIDVYCKCGTVDEAAKTFMNVSKNNLVAWNAMVMGYAQHGCYHEVFELFNKMLELGIQPDEITYLGVLNSCCHAGLVNEAHTYLSSMLELHGVVPCLEHYACMIDLFGRVGLLEDAKRTIDQMPIMPDAQIWQILLSGCNIHGNVDLGEVAAKKLIELQPENDSAYVLLSNLYASAGRWNAVGKLRRVMKKKIICKEPGSSWIQVRGSVHYFFASDTSHPESKEIYMKLQRLYEEMFASPYLEQDRPVNYDPIQF
SIO_010081: LOC104881090
subclass of: SO_0000673
so part of: LOC104881090
location: 349466..351910
location: region:349466-351910:1
so has part: feature:349466-351910:1:exon

XP_010658270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:349466-351910:1:exon

LOC104881090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104881090
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein At2g13600
translation: MKGLATHSDALQSIKTLVLKRLYPQALRASASLLHPPLTDQSYALFLKSGFALDAFLSSFIVNRFAISGDFARARRFLLDTPYPDTVSWNSLISGYARFRQPGPVFDLFNGLRRSGLSPDEFSLSSLVKGCGVLEQNEVAHGVCLKMGLLNGFVVSGLLDGYAKLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNGEFEKGREVFVEMRGLGLGLELNEFSLTSVLGALSDVREGEQVFGLSVKMGLLCGCSIHLNNALMNMYSRCGSKSDAIKMFDEMTEPDVVSWTERIGAAYDAIEAFELFRLVLSGNMEVNEYMLINVLSAMREPKLLKSGRQIQGLCQKAGYLLVASVNNALIFMYGKCGEMVAARHIFDEMLCGDSVSWNSLIAGYAENGLMKQALKVFSQMRDYLLQPNKYTLASILEVAANSNFPEQAMQIHSYIVKLGFIVDDSMLSCLITAYGKCNMICESKRVYSDISQINVLHLNAMAATLVHAGCHADALKLFQTGWRLHQEVDCITLSIVLKACGALTDLEYGRNIHSMALKSGMSQDNFVESAVIDVYCKCGTVDEAAKTFMNVSKNNLVAWNAMVMGYAQHGCYHEVFELFNKMLELGIQPDEITYLGVLNSCCHAGLVNEAHTYLSSMLELHGVVPCLEHYACMIDLFGRVGLLEDAKRTIDQMPIMPDAQIWQILLSGCNIHGNVDLGEVAAKKLIELQPENDSAYVLLSNLYASAGRWNAVGKLRRVMKKKIICKEPGSSWIQVRGSVHYFFASDTSHPESKEIYMKLQRLYEEMFASPYLEQDRPVNYDPIQF
SIO_010081: LOC104881090
subclass of: SO_0000673
so part of: LOC104881090
location: 349466..351910
location: region:349466-351910:1
so has part: feature:349466-351910:1:exon

XP_010658274.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:349466-351910:1:exon

LOC100251848
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100251848
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 355482..357193
location: region:355482-357193:1
so has part: feature:355482-357193:1:exon
subclass of: SO_0000010

100251848
type: Gene
SIO_000068: ncbigene

position:355482:1
position: 355482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357193:1
position: 357193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355482-357193:1:exon

LOC100251848
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100251848
product: uncharacterized LOC100251848
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_002273092.4
SIO_010081: LOC100251848
subclass of: SO_0000673
so part of: LOC100251848
location: join(355482..356426,356506..356620,356718..356799,356877..356928,357090..357193)
location: region:355482-357193:1
so has part: feature:355482-356426:1:exon
so has part: feature:356506-356620:1:exon
so has part: feature:356718-356799:1:exon
so has part: feature:356877-356928:1:exon
so has part: feature:357090-357193:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:355482-356426:1:exon

position:356426:1
position: 356426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:356506-356620:1:exon

position:356506:1
position: 356506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356620:1
position: 356620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:356718-356799:1:exon

position:356718:1
position: 356718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356799:1
position: 356799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:356877-356928:1:exon

position:356877:1
position: 356877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356928:1
position: 356928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:357090-357193:1:exon

position:357090:1
position: 357090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100251848
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100251848
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100251848
translation: MAAPIRVSGQTPRPIAGLALSSLPMKTACQLKQNRAMTMQQGISIKSMKKNKTKFRGLYLAVQRRSNSYFGSSGPFPSETIELFYTCINDKNLKQLAKLVSDDCCFNDLSFPQPFKGKKEVLRFFEELTAVMGKNVKFRILHVCEGDGLTAAIDWHLEWQGKQIPFTRGCSFYECAEEGKSLIIKEAKIVIESPIKPGPFALTLLKIVTTLFDDFPKATESKLASINI
SIO_010081: LOC100251848
subclass of: SO_0000673
so part of: LOC100251848
location: join(356070..356426,356506..356620,356718..356799,356877..356928,357090..357170)
location: region:356070-357170:1
so has part: feature:356070-356426:1:exon
so has part: feature:356506-356620:1:exon
so has part: feature:356718-356799:1:exon
so has part: feature:356877-356928:1:exon
so has part: feature:357090-357170:1:exon

XP_002273128.2
type: Protein
SIO_000068: ncbiprotein

position:356070:1
position: 356070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357170:1
position: 357170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356070-356426:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:356506-356620:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:356718-356799:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:356877-356928:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:357090-357170:1:exon

LOC100854417
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100854417
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(357137..358710)
location: region:357137-358710:-1
so has part: feature:357137-358710:-1:exon
subclass of: SO_0000011

100854417
type: Gene
SIO_000068: ncbigene

position:357137:-1
position: 357137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358710:-1
position: 358710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357137-358710:-1:exon

LOC100854417
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 29760
nc RNA class: lncRNA
gene: LOC100854417
product: uncharacterized LOC100854417
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 202 samples with support for all annotated introns
transcript id: XR_787119.2
SIO_010081: LOC100854417
subclass of: SO_0000673
so part of: LOC100854417
location: complement(join(357137..357675,357757..357891,358669..358710))
location: region:357137-358710:-1
so has part: feature:358669-358710:-1:exon
so has part: feature:357757-357891:-1:exon
so has part: feature:357137-357675:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:358669-358710:-1:exon

position:358669:-1
position: 358669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:357757-357891:-1:exon

position:357757:-1
position: 357757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357891:-1
position: 357891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:357137-357675:-1:exon

position:357675:-1
position: 357675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BCH1
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: BCH1
note: beta-carotene hydroxylase; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(360270..361917)
location: region:360270-361917:-1
so has part: feature:360270-361917:-1:exon
subclass of: SO_0000010

100232875
type: Gene
SIO_000068: ncbigene

position:360270:-1
position: 360270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361917:-1
position: 361917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360270-361917:-1:exon

BCH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: BCH1
product: beta-carotene hydroxylase
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001281197.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 4 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001281197.1
SIO_010081: BCH1
subclass of: SO_0000673
so part of: BCH1
location: complement(join(360270..360347,360435..360491,360601..360726,360964..361098,361213..361284,361380..361439,361546..361917))
location: region:360270-361917:-1
so has part: feature:361546-361917:-1:exon
so has part: feature:361380-361439:-1:exon
so has part: feature:361213-361284:-1:exon
so has part: feature:360964-361098:-1:exon
so has part: feature:360601-360726:-1:exon
so has part: feature:360435-360491:-1:exon
so has part: feature:360270-360347:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:361546-361917:-1:exon

position:361546:-1
position: 361546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:361380-361439:-1:exon

position:361380:-1
position: 361380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361439:-1
position: 361439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:361213-361284:-1:exon

position:361213:-1
position: 361213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361284:-1
position: 361284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:360964-361098:-1:exon

position:360964:-1
position: 360964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361098:-1
position: 361098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:360601-360726:-1:exon

position:360601:-1
position: 360601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360726:-1
position: 360726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:360435-360491:-1:exon

position:360435:-1
position: 360435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360491:-1
position: 360491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:360270-360347:-1:exon

position:360347:-1
position: 360347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BCH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: BCH1
inference: similar to AA sequence (same species):RefSeq:NP_001268126.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 1 substitution compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: beta-carotene hydroxylase
translation: MATGISASLNSMSRRLGRNSFTATGPSSVISLSSFLTPVTHLKGNIFPLQRRRSLKVCLVLEKKIEDGIEIEDDSPESSNRASERLARKKAERYTYLVAAMMSSLGITSMAIVAVYYRFSWQMEGGEIPVLEMLGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAISLLSYGLFNKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHRRFPVGPIANVPYLRKVASAHQLHHSDKFNGVPYGLFLGPMELEEVGGMEELEKEINRRIKSSDSS
SIO_010081: BCH1
subclass of: SO_0000673
so part of: BCH1
location: complement(join(360270..360347,360435..360491,360601..360726,360964..361098,361213..361284,361380..361439,361546..361917))
location: region:360270-361917:-1
so has part: feature:361546-361917:-1:exon
so has part: feature:361380-361439:-1:exon
so has part: feature:361213-361284:-1:exon
so has part: feature:360964-361098:-1:exon
so has part: feature:360601-360726:-1:exon
so has part: feature:360435-360491:-1:exon
so has part: feature:360270-360347:-1:exon

NP_001268126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:361546-361917:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361380-361439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:361213-361284:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:360964-361098:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:360601-360726:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:360435-360491:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:360270-360347:-1:exon

LOC100250191
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100250191
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 371219..372059
location: region:371219-372059:1
so has part: feature:371219-372059:1:exon
subclass of: SO_0000010

100250191
type: Gene
SIO_000068: ncbigene

position:371219:1
position: 371219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372059:1
position: 372059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371219-372059:1:exon

LOC100250191
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100250191
product: protein SPIRAL1-like 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 178 samples with support for all annotated introns
transcript id: XM_002278952.3
SIO_010081: LOC100250191
subclass of: SO_0000673
so part of: LOC100250191
location: join(371219..371574,371668..372059)
location: region:371219-372059:1
so has part: feature:371219-371574:1:exon
so has part: feature:371668-372059:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:371219-371574:1:exon

position:371574:1
position: 371574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:371668-372059:1:exon

position:371668:1
position: 371668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100250191
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100250191
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SPIRAL1-like 5
translation: MSRGGSYGGGQSSLGYLFGSDEQPSEPPVSPTIQLPPYGIDTIPEKPPNRPPPAEKQSSSNNYQRTQGQNTGNFITDRPSTKVRSVPGGDSSLGYLFGDK
SIO_010081: LOC100250191
subclass of: SO_0000673
so part of: LOC100250191
location: join(371347..371574,371668..371742)
location: region:371347-371742:1
so has part: feature:371347-371574:1:exon
so has part: feature:371668-371742:1:exon

XP_002278988.1
type: Protein
SIO_000068: ncbiprotein

position:371347:1
position: 371347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371742:1
position: 371742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371347-371574:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:371668-371742:1:exon

LOC100255362
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100255362
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 377859..380085
location: region:377859-380085:1
so has part: feature:377859-380085:1:exon
subclass of: SO_0000010

100255362
type: Gene
SIO_000068: ncbigene

position:377859:1
position: 377859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380085:1
position: 380085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377859-380085:1:exon

LOC100255362
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100255362
product: probable polygalacturonase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 38 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 212 samples with support for all annotated introns
transcript id: XM_002278894.4
SIO_010081: LOC100255362
subclass of: SO_0000673
so part of: LOC100255362
location: join(377859..378045,378210..378542,378662..378782,378860..379034,379146..379216,379291..380085)
location: region:377859-380085:1
so has part: feature:377859-378045:1:exon
so has part: feature:378210-378542:1:exon
so has part: feature:378662-378782:1:exon
so has part: feature:378860-379034:1:exon
so has part: feature:379146-379216:1:exon
so has part: feature:379291-380085:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:377859-378045:1:exon

position:378045:1
position: 378045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:378210-378542:1:exon

position:378210:1
position: 378210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378542:1
position: 378542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:378662-378782:1:exon

position:378662:1
position: 378662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378782:1
position: 378782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:378860-379034:1:exon

position:378860:1
position: 378860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379034:1
position: 379034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:379146-379216:1:exon

position:379146:1
position: 379146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379216:1
position: 379216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:379291-380085:1:exon

position:379291:1
position: 379291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100255362
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100255362
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable polygalacturonase
translation: MELSKSLRTARVVGVVSVVVVLVLLSTNGAESRKHWVFDYFEYSAINCRAHSASLTDFGGVGDGTTSNTKAFQAAIDHLSQFASDGGSQLFVPPGRWLTGSFNLTSHFTLYLHKDAVLLASQDEHEWPVIDPLPSYGRGRDTQGGRYISLIFGTNLTDVVITGENGTIDGQGALWWAKFHKGELKYTRPYLIEIMHSDNVQISSLTLVNSPSWNVHPVYSSNVIIQGLTITAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDEYGIAYGMPTKQLVIRRLTCISPFSATIALGSEMSGGIEDVRAEDILAIDTESGVRIKTAVGRGGYVKDIYVRSMIMKTMKWAFWMTGNYGSHADNNYDPNALPAIQGINYRDMVAENVTMAGRLEGISGDPFTGICISNVTIGLAKKAKKAPWTCTDIAGITSGVVPQPCDLLPDQGPEKIVACNFPTDSLPIDTVEVQTCSYWGKYL
SIO_010081: LOC100255362
subclass of: SO_0000673
so part of: LOC100255362
location: join(378013..378045,378210..378542,378662..378782,378860..379034,379146..379216,379291..380000)
location: region:378013-380000:1
so has part: feature:378013-378045:1:exon
so has part: feature:378210-378542:1:exon
so has part: feature:378662-378782:1:exon
so has part: feature:378860-379034:1:exon
so has part: feature:379146-379216:1:exon
so has part: feature:379291-380000:1:exon

XP_002278930.1
type: Protein
SIO_000068: ncbiprotein

position:378013:1
position: 378013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380000:1
position: 380000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378013-378045:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:378210-378542:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:378662-378782:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:378860-379034:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:379146-379216:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379291-380000:1:exon

LOC100260441
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100260441
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(380292..386969)
location: region:380292-386969:-1
so has part: feature:380292-386969:-1:exon
subclass of: SO_0000010

100260441
type: Gene
SIO_000068: ncbigene

position:380292:-1
position: 380292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386969:-1
position: 386969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380292-386969:-1:exon

LOC100260441
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100260441
product: mitogen-activated protein kinase homolog MMK2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 108 samples with support for all annotated introns
transcript id: XM_019216293.1
SIO_010081: LOC100260441
subclass of: SO_0000673
so part of: LOC100260441
location: complement(join(380292..380813,380917..381100,381236..381568,384788..384917,386546..386969))
location: region:380292-386969:-1
so has part: feature:386546-386969:-1:exon
so has part: feature:384788-384917:-1:exon
so has part: feature:381236-381568:-1:exon
so has part: feature:380917-381100:-1:exon
so has part: feature:380292-380813:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:386546-386969:-1:exon

position:386546:-1
position: 386546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:384788-384917:-1:exon

position:384788:-1
position: 384788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384917:-1
position: 384917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:381236-381568:-1:exon

position:381236:-1
position: 381236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381568:-1
position: 381568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:380917-381100:-1:exon

position:380917:-1
position: 380917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381100:-1
position: 381100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:380292-380813:-1:exon

position:380813:-1
position: 380813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100260441
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100260441
product: mitogen-activated protein kinase homolog MMK2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 245 samples with support for all annotated introns
transcript id: XM_002278824.4
SIO_010081: LOC100260441
subclass of: SO_0000673
so part of: LOC100260441
location: complement(join(380292..380813,380917..381100,381236..381568,382636..382773,384788..384917,386546..386966))
location: region:380292-386966:-1
so has part: feature:386546-386966:-1:exon
so has part: feature:384788-384917:-1:exon
so has part: feature:382636-382773:-1:exon
so has part: feature:381236-381568:-1:exon
so has part: feature:380917-381100:-1:exon
so has part: feature:380292-380813:-1:exon

position:386966:-1
position: 386966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386546-386966:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:384788-384917:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:382636-382773:-1:exon

position:382636:-1
position: 382636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382773:-1
position: 382773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:381236-381568:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:380917-381100:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:380292-380813:-1:exon

LOC100260441
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100260441
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase homolog MMK2 isoform X2
translation: MSMDASSGSGDGGNIKGVPTHGGRYVRYNVYGNFFEVSAKYVPPIRPVGRGAYGIVCAAVNSETHEEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELLGSPDDASLGFLRSNNARRYVRQLPQYPKQQISARFPNMSPSAVDLLEKMLVFDPTKRITVDEALCHPYLSSLHDINDEPVCPSPFSFDFEQSSITEENIKELIWRESVKFNPDPTH
SIO_010081: LOC100260441
subclass of: SO_0000673
so part of: LOC100260441
location: complement(join(380641..380813,380917..381100,381236..381568,384788..384917,386546..386715))
location: region:380641-386715:-1
so has part: feature:386546-386715:-1:exon
so has part: feature:384788-384917:-1:exon
so has part: feature:381236-381568:-1:exon
so has part: feature:380917-381100:-1:exon
so has part: feature:380641-380813:-1:exon

XP_019071838.1
type: Protein
SIO_000068: ncbiprotein

position:380641:-1
position: 380641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386715:-1
position: 386715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386546-386715:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:384788-384917:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:381236-381568:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:380917-381100:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:380641-380813:-1:exon

LOC100260441
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100260441
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase homolog MMK2 isoform X1
translation: MSMDASSGSGDGGNIKGVPTHGGRYVRYNVYGNFFEVSAKYVPPIRPVGRGAYGIVCAAVNSETHEEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENVIAIKDIIRPPKKETFNDVYIVYELMDTDLHQIICSNQSLTDDHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELLGSPDDASLGFLRSNNARRYVRQLPQYPKQQISARFPNMSPSAVDLLEKMLVFDPTKRITVDEALCHPYLSSLHDINDEPVCPSPFSFDFEQSSITEENIKELIWRESVKFNPDPTH
SIO_010081: LOC100260441
subclass of: SO_0000673
so part of: LOC100260441
location: complement(join(380641..380813,380917..381100,381236..381568,382636..382773,384788..384917,386546..386715))
location: region:380641-386715:-1
so has part: feature:386546-386715:-1:exon
so has part: feature:384788-384917:-1:exon
so has part: feature:382636-382773:-1:exon
so has part: feature:381236-381568:-1:exon
so has part: feature:380917-381100:-1:exon
so has part: feature:380641-380813:-1:exon

XP_002278860.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:386546-386715:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:384788-384917:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:382636-382773:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:381236-381568:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:380917-381100:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:380641-380813:-1:exon

LOC100265661
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100265661
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 412516..415833
location: region:412516-415833:1
so has part: feature:412516-415833:1:exon
subclass of: SO_0000010

100265661
type: Gene
SIO_000068: ncbigene

position:412516:1
position: 412516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415833:1
position: 415833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412516-415833:1:exon

LOC100265661
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100265661
product: heat shock protein 83, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_019216300.1
SIO_010081: LOC100265661
subclass of: SO_0000673
so part of: LOC100265661
location: join(412516..412758,413409..413550,413665..413945,414038..415621,415657..415833)
location: region:412516-415833:1
so has part: feature:412516-412758:1:exon
so has part: feature:413409-413550:1:exon
so has part: feature:413665-413945:1:exon
so has part: feature:414038-415621:1:exon
so has part: feature:415657-415833:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:412516-412758:1:exon

position:412758:1
position: 412758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:413409-413550:1:exon

position:413409:1
position: 413409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413550:1
position: 413550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:413665-413945:1:exon

position:413665:1
position: 413665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413945:1
position: 413945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:414038-415621:1:exon

position:414038:1
position: 414038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415621:1
position: 415621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:415657-415833:1:exon

position:415657:1
position: 415657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100265661
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100265661
product: heat shock protein 83, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 154 samples with support for all annotated introns
transcript id: XM_002278858.3
SIO_010081: LOC100265661
subclass of: SO_0000673
so part of: LOC100265661
location: join(412516..412758,413409..413550,413665..413945,414038..415832)
location: region:412516-415832:1
so has part: feature:412516-412758:1:exon
so has part: feature:413409-413550:1:exon
so has part: feature:413665-413945:1:exon
so has part: feature:414038-415832:1:exon

position:415832:1
position: 415832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412516-412758:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:413409-413550:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413665-413945:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:414038-415832:1:exon

LOC100265661
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100265661
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock protein 83
translation: MADVAMGEAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSKLDAQPELFIRLVPDKVNKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYIWESQAGGSFTITRDVNGEQLGRGTKITLFLKEDQMEYLEERRLKDLVKKHSEFISYPIYLWTEKTTEKEVSDDEDEEPKKEEEGDVEEVDEEKETKSKKKKVKEVSHEWQLINKQKPIWLRKPEEITKEEYASFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKMNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYNKFYEAFSKNLKLGIHEDSQNRAKLAELLRYYSTKSGDELTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLEDETEEEKKKKEEKKKSFESLCKTIKDILGDKVEKVVVSERIVDSPCCLVTGEYGWTANMERIMKAQALRDSSMGSYMSSKKTMEINPDNPIMEELRKRAEVDKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGARIHRMLKLGLSIDEDEAGGDDTEMPPLEEEGNEESKMEEVD
SIO_010081: LOC100265661
subclass of: SO_0000673
so part of: LOC100265661
location: join(412621..412758,413409..413550,413665..413945,414038..415588)
location: region:412621-415588:1
so has part: feature:412621-412758:1:exon
so has part: feature:413409-413550:1:exon
so has part: feature:413665-413945:1:exon
so has part: feature:414038-415588:1:exon

XP_019071845.1
type: Protein
SIO_000068: ncbiprotein

position:412621:1
position: 412621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415588:1
position: 415588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412621-412758:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:413409-413550:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413665-413945:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:414038-415588:1:exon

LOC100265661
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100265661
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock protein 83
translation: MADVAMGEAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSKLDAQPELFIRLVPDKVNKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYIWESQAGGSFTITRDVNGEQLGRGTKITLFLKEDQMEYLEERRLKDLVKKHSEFISYPIYLWTEKTTEKEVSDDEDEEPKKEEEGDVEEVDEEKETKSKKKKVKEVSHEWQLINKQKPIWLRKPEEITKEEYASFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKMNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYNKFYEAFSKNLKLGIHEDSQNRAKLAELLRYYSTKSGDELTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLEDETEEEKKKKEEKKKSFESLCKTIKDILGDKVEKVVVSERIVDSPCCLVTGEYGWTANMERIMKAQALRDSSMGSYMSSKKTMEINPDNPIMEELRKRAEVDKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGARIHRMLKLGLSIDEDEAGGDDTEMPPLEEEGNEESKMEEVD
SIO_010081: LOC100265661
subclass of: SO_0000673
so part of: LOC100265661
location: join(412621..412758,413409..413550,413665..413945,414038..415588)
location: region:412621-415588:1
so has part: feature:412621-412758:1:exon
so has part: feature:413409-413550:1:exon
so has part: feature:413665-413945:1:exon
so has part: feature:414038-415588:1:exon

XP_002278894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:412621-412758:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:413409-413550:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413665-413945:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:414038-415588:1:exon

LOC104881105
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC104881105
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 422317..424434
location: region:422317-424434:1
so has part: feature:422317-424434:1:exon
subclass of: SO_0000010

104881105
type: Gene
SIO_000068: ncbigene

position:422317:1
position: 422317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424434:1
position: 424434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422317-424434:1:exon

LOC104881105
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104881105
product: pentatricopeptide repeat-containing protein At4g39530
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 72 Proteins
transcript id: XM_010660013.2
SIO_010081: LOC104881105
subclass of: SO_0000673
so part of: LOC104881105
location: 422317..424434
location: region:422317-424434:1
so has part: feature:422317-424434:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:422317-424434:1:exon

LOC104881105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104881105
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein At4g39530
translation: MYSLQSLPLISSSSVHRPAPAKQPRLAEPRDKYPHIHTLSDSLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRIEDAAKLFDHMPDKTVVSWTSMMSGHCQRGAFDEVISIFWRMLETLQPNEYTLAVILQACAQKRDLKLVQLIHCHIIKTGFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRLICRDVVSWTSVISGCVLNGMVEKALLFFFEMQEDGVSPNTVTILSILQACSLINEWQVFQWVHGLVMKAEWRENVFVMNSLVEMYSINGYFKEGFQIFCNFCFEGDGQYLSTETIATLLQGCSHSKCLKLGEQIHGYQIKHGFFPCTIVENSLIYMYAENERDDAAFQLFRKMSCRDIVSWNTMISSLVKGSSSYQALMLLSEVHSNGGSDMIYPDFVTILASIQACSSLASLQLGQVIHGYITRAGLICDIFVQNSLVDMYGKCGRLHLAEKVSEEMPVRDLGSWNSLIAAYGINGNGISALNVFKQLKNTGAHRPNAITFTNILSACAHAGLVAEGFEIFKSMKREYSLEPRIEHFACMVDLLGRAGRLEEAEAFIQKMPFEPGPEVWGALLGGCGLFGNLDIAERVAKKLYILEPKSRAWRVALSNVYASVNKWEDAAKVRAEMRRSEELQKEGGWSSVEVRGQEFRFMVGDTMHPEARMVYAVLKGINEHIRDACRIV
SIO_010081: LOC104881105
subclass of: SO_0000673
so part of: LOC104881105
location: 422317..424434
location: region:422317-424434:1
so has part: feature:422317-424434:1:exon

XP_010658315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:422317-424434:1:exon

LOC100243340
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100243340
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(424442..429649)
location: region:424442-429649:-1
so has part: feature:424442-429649:-1:exon
subclass of: SO_0000010

100243340
type: Gene
SIO_000068: ncbigene

position:424442:-1
position: 424442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429649:-1
position: 429649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424442-429649:-1:exon

LOC100243340
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100243340
product: 40S ribosomal protein S10-1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 mRNAs, 107 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 254 samples with support for all annotated introns
transcript id: XM_002278723.4
SIO_010081: LOC100243340
subclass of: SO_0000673
so part of: LOC100243340
location: complement(join(424442..424791,428447..428579,428779..429055,429162..429210,429514..429649))
location: region:424442-429649:-1
so has part: feature:429514-429649:-1:exon
so has part: feature:429162-429210:-1:exon
so has part: feature:428779-429055:-1:exon
so has part: feature:428447-428579:-1:exon
so has part: feature:424442-424791:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:429514-429649:-1:exon

position:429514:-1
position: 429514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:429162-429210:-1:exon

position:429162:-1
position: 429162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429210:-1
position: 429210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:428779-429055:-1:exon

position:428779:-1
position: 428779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429055:-1
position: 429055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:428447-428579:-1:exon

position:428447:-1
position: 428447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428579:-1
position: 428579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:424442-424791:-1:exon

position:424791:-1
position: 424791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100243340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100243340
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S10-1
translation: MIIPEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSVKPAGRPMGPPGDRPRGPPRFEGDRPRFGDRDGYRGGPRGPPGEFGDKGGAPADYQPSFRGPGGRPGFGRGGGGYGAGPTSSSNLP
SIO_010081: LOC100243340
subclass of: SO_0000673
so part of: LOC100243340
location: complement(join(424711..424791,428447..428579,428779..429055,429162..429210,429514..429516))
location: region:424711-429516:-1
so has part: feature:429514-429516:-1:exon
so has part: feature:429162-429210:-1:exon
so has part: feature:428779-429055:-1:exon
so has part: feature:428447-428579:-1:exon
so has part: feature:424711-424791:-1:exon

XP_002278759.1
type: Protein
SIO_000068: ncbiprotein

position:424711:-1
position: 424711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429516:-1
position: 429516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429514-429516:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:429162-429210:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:428779-429055:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:428447-428579:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:424711-424791:-1:exon

LOC100244939
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100244939
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(433653..435654)
location: region:433653-435654:-1
so has part: feature:433653-435654:-1:exon
subclass of: SO_0000010

100244939
type: Gene
SIO_000068: ncbigene

position:433653:-1
position: 433653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435654:-1
position: 435654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433653-435654:-1:exon

LOC100244939
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100244939
product: transcription factor MYB86
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_002272968.3
SIO_010081: LOC100244939
subclass of: SO_0000673
so part of: LOC100244939
location: complement(join(433653..434599,435180..435309,435433..435654))
location: region:433653-435654:-1
so has part: feature:435433-435654:-1:exon
so has part: feature:435180-435309:-1:exon
so has part: feature:433653-434599:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:435433-435654:-1:exon

position:435433:-1
position: 435433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:435180-435309:-1:exon

position:435180:-1
position: 435180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435309:-1
position: 435309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:433653-434599:-1:exon

position:434599:-1
position: 434599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100244939
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100244939
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor MYB86
translation: MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTYGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIINLHGVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRKPSAPLASSITNTEHSQLGYGSSQLDMVNQDLMMKQPAQETLFSSPAPLFMFDTGSLDLIGDGNGRTELFQEVAGLSSETWQLNQHQVEALPPPASYSVGMDTNYLPPLVENIENMVPMQVQSCSIDEEGEIALECLQRQELNDWVESQQCPSFLFWDQVEGHLGGEEIAPPSSNMGAVLSSYSTSL
SIO_010081: LOC100244939
subclass of: SO_0000673
so part of: LOC100244939
location: complement(join(433948..434599,435180..435309,435433..435565))
location: region:433948-435565:-1
so has part: feature:435433-435565:-1:exon
so has part: feature:435180-435309:-1:exon
so has part: feature:433948-434599:-1:exon

XP_002273004.1
type: Protein
SIO_000068: ncbiprotein

position:433948:-1
position: 433948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435565:-1
position: 435565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435433-435565:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:435180-435309:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:433948-434599:-1:exon

LOC100248464
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100248464
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 446961..448743
location: region:446961-448743:1
so has part: feature:446961-448743:1:exon
subclass of: SO_0000010

100248464
type: Gene
SIO_000068: ncbigene

position:446961:1
position: 446961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448743:1
position: 448743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446961-448743:1:exon

LOC100248464
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100248464
product: uncharacterized LOC100248464
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_002278671.3
SIO_010081: LOC100248464
subclass of: SO_0000673
so part of: LOC100248464
location: 446961..448743
location: region:446961-448743:1
so has part: feature:446961-448743:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:446961-448743:1:exon

LOC100248464
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100248464
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100248464
translation: MYNCHNRFFISPSSFLTSSLLLSSLFIFPVSRSLSLSRSPTPSSSIMPATEYQGSFLGRISIRRNQIASMDGNHEQDLEDLEIFQKHVADRFSDLLSASDATADASVDPLLSIAWLRKLLDVFLCCEAEFKALVFMGRDPSHIARPPLDRLIPELLERVVKALDVCNAVTHGVESVRHWHKLAEIAVTALEQRPIGEGQVRRAKKALSSLVASMTVEDKESINSKATERAWSFGRRGSKDRIAGQFRSLSWTVSKSWSAAKQIQLMLGNIAAPRGAESTGLASPVFVMSIVLSFVTWTLVAAIPCQERSGLPTHFPIPRQLPWAQSIIGLQDRIGEDWKKKEKKGSAGLLEEMQKMEKLGQSLIEFADSFHFPAEPERVEEVAAQVTELAETCRKMEEGLGPLQQQIREVFHRMVRSRGEMLDILDQAGKVSSPIM
SIO_010081: LOC100248464
subclass of: SO_0000673
so part of: LOC100248464
location: 446994..448304
location: region:446994-448304:1
so has part: feature:446994-448304:1:exon

XP_002278707.2
type: Protein
SIO_000068: ncbiprotein

position:446994:1
position: 446994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448304:1
position: 448304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446994-448304:1:exon

LOC100253570
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100253570
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 450002..457429
location: region:450002-457429:1
so has part: feature:450002-457429:1:exon
subclass of: SO_0000010

100253570
type: Gene
SIO_000068: ncbigene

position:450002:1
position: 450002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457429:1
position: 457429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450002-457429:1:exon

LOC100253570
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100253570
product: monodehydroascorbate reductase 5, mitochondrial, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 208 samples with support for all annotated introns
transcript id: XM_010660028.2
SIO_010081: LOC100253570
subclass of: SO_0000673
so part of: LOC100253570
location: join(450002..450291,450380..450554,450771..450870,450960..451037,451406..451477,451891..452009,452463..452547,453066..453155,454588..454689,454794..454883,454995..455075,455538..455609,455687..455781,455894..455982,456169..456234,456316..456356,456945..457429)
location: region:450002-457429:1
so has part: feature:450002-450291:1:exon
so has part: feature:450380-450554:1:exon
so has part: feature:450771-450870:1:exon
so has part: feature:450960-451037:1:exon
so has part: feature:451406-451477:1:exon
so has part: feature:451891-452009:1:exon
so has part: feature:452463-452547:1:exon
so has part: feature:453066-453155:1:exon
so has part: feature:454588-454689:1:exon
so has part: feature:454794-454883:1:exon
so has part: feature:454995-455075:1:exon
so has part: feature:455538-455609:1:exon
so has part: feature:455687-455781:1:exon
so has part: feature:455894-455982:1:exon
so has part: feature:456169-456234:1:exon
so has part: feature:456316-456356:1:exon
so has part: feature:456945-457429:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:450002-450291:1:exon

position:450291:1
position: 450291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:450380-450554:1:exon

position:450380:1
position: 450380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450554:1
position: 450554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:450771-450870:1:exon

position:450771:1
position: 450771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450870:1
position: 450870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:450960-451037:1:exon

position:450960:1
position: 450960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451037:1
position: 451037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:451406-451477:1:exon

position:451406:1
position: 451406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451477:1
position: 451477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:451891-452009:1:exon

position:451891:1
position: 451891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452009:1
position: 452009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:452463-452547:1:exon

position:452463:1
position: 452463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452547:1
position: 452547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:453066-453155:1:exon

position:453066:1
position: 453066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453155:1
position: 453155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:454588-454689:1:exon

position:454588:1
position: 454588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454689:1
position: 454689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:454794-454883:1:exon

position:454794:1
position: 454794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454883:1
position: 454883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:454995-455075:1:exon

position:454995:1
position: 454995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455075:1
position: 455075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:455538-455609:1:exon

position:455538:1
position: 455538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455609:1
position: 455609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:455687-455781:1:exon

position:455687:1
position: 455687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455781:1
position: 455781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:455894-455982:1:exon

position:455894:1
position: 455894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455982:1
position: 455982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:456169-456234:1:exon

position:456169:1
position: 456169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456234:1
position: 456234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:456316-456356:1:exon

position:456316:1
position: 456316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456356:1
position: 456356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:456945-457429:1:exon

position:456945:1
position: 456945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100253570
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100253570
product: monodehydroascorbate reductase 5, mitochondrial, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 235 samples with support for all annotated introns
transcript id: XM_002278612.4
SIO_010081: LOC100253570
subclass of: SO_0000673
so part of: LOC100253570
location: join(450002..450291,450380..450554,450771..450870,450960..451037,451406..451477,451891..452009,452463..452547,453066..453155,454588..454689,454794..454883,454995..455075,455538..455609,455687..455781,455894..455982,456172..456234,456316..456356,456945..457429)
location: region:450002-457429:1
so has part: feature:450002-450291:1:exon
so has part: feature:450380-450554:1:exon
so has part: feature:450771-450870:1:exon
so has part: feature:450960-451037:1:exon
so has part: feature:451406-451477:1:exon
so has part: feature:451891-452009:1:exon
so has part: feature:452463-452547:1:exon
so has part: feature:453066-453155:1:exon
so has part: feature:454588-454689:1:exon
so has part: feature:454794-454883:1:exon
so has part: feature:454995-455075:1:exon
so has part: feature:455538-455609:1:exon
so has part: feature:455687-455781:1:exon
so has part: feature:455894-455982:1:exon
so has part: feature:456172-456234:1:exon
so has part: feature:456316-456356:1:exon
so has part: feature:456945-457429:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:450002-450291:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:450380-450554:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450771-450870:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450960-451037:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:451406-451477:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:451891-452009:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:452463-452547:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:453066-453155:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:454588-454689:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:454794-454883:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:454995-455075:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:455538-455609:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:455687-455781:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:455894-455982:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:456172-456234:1:exon

position:456172:1
position: 456172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:456316-456356:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:456945-457429:1:exon

LOC100253570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100253570
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: monodehydroascorbate reductase 5, mitochondrial isoform X1
translation: MSSVRKLMASISNSLPLKHGISLWCPQHASLNRTRLPSSFGSSASARRYGVVSCAFANENREFVIVGGGNAAGYAARTFVEHGMADGKLCIVSKEAFAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPDWYKEKGIEMLYEDPVTGIDIEKQTLMTNSGKLLKYGSLIIATGCTASRLPDKIGGNLPGVHYIRDVADADSLISSLEKARKVVIVGGGYIGMEVAAAAAGWKLDTTIIFPEDHLLQRLFTPTLARRYEEFYQENGVKFVKGASIKNIEAGSDGHVTAVKLENGSTIEADTIIIGIGAKPAVSPFERVGINTTVGGIQVDGQFRTSVPGIFAIGDVAAFPLKMYNRIARVEHVDHARRSAQHCINALLTAKTHLYDYLPYFYSRVFEYEGSPRKIWWQFFGDNAVGETVEIGNFDPKIATFWIDSGKLKGVLLESGSPEEFQLLPKLARSQPHVDMTKLQKASSVEEALELAHAYVQAGAAV
SIO_010081: LOC100253570
subclass of: SO_0000673
so part of: LOC100253570
location: join(450282..450291,450380..450554,450771..450870,450960..451037,451406..451477,451891..452009,452463..452547,453066..453155,454588..454689,454794..454883,454995..455075,455538..455609,455687..455781,455894..455982,456169..456234,456316..456356,456945..457076)
location: region:450282-457076:1
so has part: feature:450282-450291:1:exon
so has part: feature:450380-450554:1:exon
so has part: feature:450771-450870:1:exon
so has part: feature:450960-451037:1:exon
so has part: feature:451406-451477:1:exon
so has part: feature:451891-452009:1:exon
so has part: feature:452463-452547:1:exon
so has part: feature:453066-453155:1:exon
so has part: feature:454588-454689:1:exon
so has part: feature:454794-454883:1:exon
so has part: feature:454995-455075:1:exon
so has part: feature:455538-455609:1:exon
so has part: feature:455687-455781:1:exon
so has part: feature:455894-455982:1:exon
so has part: feature:456169-456234:1:exon
so has part: feature:456316-456356:1:exon
so has part: feature:456945-457076:1:exon

XP_010658330.1
type: Protein
SIO_000068: ncbiprotein

position:450282:1
position: 450282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457076:1
position: 457076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450282-450291:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:450380-450554:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450771-450870:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450960-451037:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:451406-451477:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:451891-452009:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:452463-452547:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:453066-453155:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:454588-454689:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:454794-454883:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:454995-455075:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:455538-455609:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:455687-455781:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:455894-455982:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:456169-456234:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:456316-456356:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:456945-457076:1:exon

LOC100253570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100253570
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: monodehydroascorbate reductase 5, mitochondrial isoform X2
translation: MSSVRKLMASISNSLPLKHGISLWCPQHASLNRTRLPSSFGSSASARRYGVVSCAFANENREFVIVGGGNAAGYAARTFVEHGMADGKLCIVSKEAFAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPDWYKEKGIEMLYEDPVTGIDIEKQTLMTNSGKLLKYGSLIIATGCTASRLPDKIGGNLPGVHYIRDVADADSLISSLEKARKVVIVGGGYIGMEVAAAAAGWKLDTTIIFPEDHLLQRLFTPTLARRYEEFYQENGVKFVKGASIKNIEAGSDGHVTAVKLENGSTIEADTIIIGIGAKPAVSPFERVGINTTVGGIQVDGQFRTSVPGIFAIGDVAAFPLKMYNRIARVEHVDHARRSAQHCINALLTAKTHLYDYLPYFYSRVFEYEGSPRKIWWQFFGDNVGETVEIGNFDPKIATFWIDSGKLKGVLLESGSPEEFQLLPKLARSQPHVDMTKLQKASSVEEALELAHAYVQAGAAV
SIO_010081: LOC100253570
subclass of: SO_0000673
so part of: LOC100253570
location: join(450282..450291,450380..450554,450771..450870,450960..451037,451406..451477,451891..452009,452463..452547,453066..453155,454588..454689,454794..454883,454995..455075,455538..455609,455687..455781,455894..455982,456172..456234,456316..456356,456945..457076)
location: region:450282-457076:1
so has part: feature:450282-450291:1:exon
so has part: feature:450380-450554:1:exon
so has part: feature:450771-450870:1:exon
so has part: feature:450960-451037:1:exon
so has part: feature:451406-451477:1:exon
so has part: feature:451891-452009:1:exon
so has part: feature:452463-452547:1:exon
so has part: feature:453066-453155:1:exon
so has part: feature:454588-454689:1:exon
so has part: feature:454794-454883:1:exon
so has part: feature:454995-455075:1:exon
so has part: feature:455538-455609:1:exon
so has part: feature:455687-455781:1:exon
so has part: feature:455894-455982:1:exon
so has part: feature:456172-456234:1:exon
so has part: feature:456316-456356:1:exon
so has part: feature:456945-457076:1:exon

XP_002278648.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:450282-450291:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:450380-450554:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450771-450870:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450960-451037:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:451406-451477:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:451891-452009:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:452463-452547:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:453066-453155:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:454588-454689:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:454794-454883:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:454995-455075:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:455538-455609:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:455687-455781:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:455894-455982:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:456172-456234:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:456316-456356:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:456945-457076:1:exon

LOC100258716
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100258716
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 459698..461039
location: region:459698-461039:1
so has part: feature:459698-461039:1:exon
subclass of: SO_0000010

100258716
type: Gene
SIO_000068: ncbigene

position:459698:1
position: 459698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461039:1
position: 461039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459698-461039:1:exon

LOC100258716
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100258716
product: heavy metal-associated isoprenylated plant protein 39
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 228 samples with support for all annotated introns
transcript id: XM_002278506.3
SIO_010081: LOC100258716
subclass of: SO_0000673
so part of: LOC100258716
location: join(459698..459950,460336..460411,460546..461039)
location: region:459698-461039:1
so has part: feature:459698-459950:1:exon
so has part: feature:460336-460411:1:exon
so has part: feature:460546-461039:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:459698-459950:1:exon

position:459950:1
position: 459950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:460336-460411:1:exon

position:460336:1
position: 460336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460411:1
position: 460411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:460546-461039:1:exon

position:460546:1
position: 460546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100258716
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100258716
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heavy metal-associated isoprenylated plant protein 39
translation: MKKVVLKLDLHDDKAKQKAMKAVSSLSGVNSIAMDMKDKKLTVVGDVDPVDIVSKLRKGWHTDILTVGPAKEEKKEDGKKDEGKKDEKKDGDKKKDTEKQIQELVDAYKAYNPHLTRYYHVQSAEENPNACVIC
SIO_010081: LOC100258716
subclass of: SO_0000673
so part of: LOC100258716
location: join(459945..459950,460336..460411,460546..460868)
location: region:459945-460868:1
so has part: feature:459945-459950:1:exon
so has part: feature:460336-460411:1:exon
so has part: feature:460546-460868:1:exon

XP_002278542.1
type: Protein
SIO_000068: ncbiprotein

position:459945:1
position: 459945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460868:1
position: 460868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459945-459950:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:460336-460411:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:460546-460868:1:exon

LOC100263876
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100263876
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(472132..475242)
location: region:472132-475242:-1
so has part: feature:472132-475242:-1:exon
subclass of: SO_0000010

100263876
type: Gene
SIO_000068: ncbigene

position:472132:-1
position: 472132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475242:-1
position: 475242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472132-475242:-1:exon

LOC100263876
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100263876
product: 1-aminocyclopropane-1-carboxylate synthase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 208 samples with support for all annotated introns
transcript id: XM_002278453.4
SIO_010081: LOC100263876
subclass of: SO_0000673
so part of: LOC100263876
location: complement(join(472132..473583,474413..474573,474668..474799,474889..475242))
location: region:472132-475242:-1
so has part: feature:474889-475242:-1:exon
so has part: feature:474668-474799:-1:exon
so has part: feature:474413-474573:-1:exon
so has part: feature:472132-473583:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:474889-475242:-1:exon

position:474889:-1
position: 474889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:474668-474799:-1:exon

position:474668:-1
position: 474668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474799:-1
position: 474799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:474413-474573:-1:exon

position:474413:-1
position: 474413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474573:-1
position: 474573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:472132-473583:-1:exon

position:473583:-1
position: 473583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100263876
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100263876
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-aminocyclopropane-1-carboxylate synthase
translation: MGYMSNQPQLLSKIATDNGHGENSPYFDGWKAYDSDPYHPIENPGGVIQMGLAENQLSFDIIEEWLLKNPKASICTVEGMSEFRDVAIFQDYHGLKEFRNAVAKFMGKVRGDRVVFDPDRIVMSGGATGAHELVTFCLADPGDAFLVPTPYYPGFDRDLRWRTGVQLLPVVCESSNDFKITREALEAAYEKAQEDNTKVKGLLITNPSNPLGTVLDRETLKSLVSFVNEKNIHLISDEIYAATVFSSPGFISVSEIIDEMECNPDLIHIVYSLSKDMGFPGFRVGIVYSYNDDVVNIGRKMSSFGLVSSQTQHLIASMLSDDEFVESFITKNSEKLATRYKTFSRGLSQVGIGCLKSNAGLFFWMDLRRLLKEPTVEAEMALWRLIINEVKLNVSPGSSFHCSEPGWFRVCFANMDDETMEVALRRIRNFVLKAKEKEVSAKRQRWQNNLKVRLSFRGLDEPHLMSPHSPIPQSPLVRART
SIO_010081: LOC100263876
subclass of: SO_0000673
so part of: LOC100263876
location: complement(join(472599..473583,474413..474573,474668..474799,474889..475056))
location: region:472599-475056:-1
so has part: feature:474889-475056:-1:exon
so has part: feature:474668-474799:-1:exon
so has part: feature:474413-474573:-1:exon
so has part: feature:472599-473583:-1:exon

XP_002278489.2
type: Protein
SIO_000068: ncbiprotein

position:472599:-1
position: 472599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475056:-1
position: 475056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474889-475056:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:474668-474799:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:474413-474573:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:472599-473583:-1:exon

LOC100250076
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100250076
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(479444..487370)
location: region:479444-487370:-1
so has part: feature:479444-487370:-1:exon
subclass of: SO_0000010

100250076
type: Gene
SIO_000068: ncbigene

position:479444:-1
position: 479444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487370:-1
position: 487370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479444-487370:-1:exon

LOC100250076
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100250076
product: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 254 samples with support for all annotated introns
transcript id: XM_002278370.3
SIO_010081: LOC100250076
subclass of: SO_0000673
so part of: LOC100250076
location: complement(join(479444..479817,486728..486858,486941..487365))
location: region:479444-487365:-1
so has part: feature:486941-487365:-1:exon
so has part: feature:486728-486858:-1:exon
so has part: feature:479444-479817:-1:exon

position:487365:-1
position: 487365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486941-487365:-1:exon

position:486941:-1
position: 486941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:486728-486858:-1:exon

position:486728:-1
position: 486728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486858:-1
position: 486858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:479444-479817:-1:exon

position:479817:-1
position: 479817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100250076
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100250076
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic isoform X1
translation: MAMAAPIHASSITKISSTKQIYPFTSHYRPSSLVLSHTLSLRSTLRRPMVAAAATTAVEAEPRSNSTAPSKSLPFRVGHGFDLHRLEPGYPLIIGGIDIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEAIRSNLSQLLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRK
SIO_010081: LOC100250076
subclass of: SO_0000673
so part of: LOC100250076
location: complement(join(479584..479817,486728..486858,486941..487271))
location: region:479584-487271:-1
so has part: feature:486941-487271:-1:exon
so has part: feature:486728-486858:-1:exon
so has part: feature:479584-479817:-1:exon

XP_002278406.1
type: Protein
SIO_000068: ncbiprotein

position:479584:-1
position: 479584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487271:-1
position: 487271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486941-487271:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:486728-486858:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479584-479817:-1:exon

LOC100250076
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100250076
product: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 95 samples with support for all annotated introns
transcript id: XM_019216316.1
SIO_010081: LOC100250076
subclass of: SO_0000673
so part of: LOC100250076
location: complement(join(479816..479902,486728..486858,486941..487370))
location: region:479816-487370:-1
so has part: feature:486941-487370:-1:exon
so has part: feature:486728-486858:-1:exon
so has part: feature:479816-479902:-1:exon

position:479816:-1
position: 479816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486941-487370:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:486728-486858:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479816-479902:-1:exon

position:479902:-1
position: 479902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100250076
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100250076
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic isoform X2
translation: MAMAAPIHASSITKISSTKQIYPFTSHYRPSSLVLSHTLSLRSTLRRPMVAAAATTAVEAEPRSNSTAPSKSLPFRVGHGFDLHRLEPGYPLIIGGIDIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAG
SIO_010081: LOC100250076
subclass of: SO_0000673
so part of: LOC100250076
location: complement(join(479897..479902,486728..486858,486941..487271))
location: region:479897-487271:-1
so has part: feature:486941-487271:-1:exon
so has part: feature:486728-486858:-1:exon
so has part: feature:479897-479902:-1:exon

XP_019071861.1
type: Protein
SIO_000068: ncbiprotein

position:479897:-1
position: 479897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486941-487271:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:486728-486858:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479897-479902:-1:exon

LOC100241601
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100241601
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(488930..493453)
location: region:488930-493453:-1
so has part: feature:488930-493453:-1:exon
subclass of: SO_0000010

100241601
type: Gene
SIO_000068: ncbigene

position:488930:-1
position: 488930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:493453:-1
position: 493453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488930-493453:-1:exon

LOC100241601
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100241601
product: DET1- and DDB1-associated protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 74 samples with support for all annotated introns
transcript id: XM_019217497.1
SIO_010081: LOC100241601
subclass of: SO_0000673
so part of: LOC100241601
location: complement(join(488930..489233,490963..491020,493217..493453))
location: region:488930-493453:-1
so has part: feature:493217-493453:-1:exon
so has part: feature:490963-491020:-1:exon
so has part: feature:488930-489233:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:493217-493453:-1:exon

position:493217:-1
position: 493217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:490963-491020:-1:exon

position:490963:-1
position: 490963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491020:-1
position: 491020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:488930-489233:-1:exon

position:489233:-1
position: 489233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100241601
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100241601
product: DET1- and DDB1-associated protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 239 samples with support for all annotated introns
transcript id: XM_002278322.2
SIO_010081: LOC100241601
subclass of: SO_0000673
so part of: LOC100241601
location: complement(join(488930..489233,489321..489382,490963..491023,493217..493425))
location: region:488930-493425:-1
so has part: feature:493217-493425:-1:exon
so has part: feature:490963-491023:-1:exon
so has part: feature:489321-489382:-1:exon
so has part: feature:488930-489233:-1:exon

position:493425:-1
position: 493425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493217-493425:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:490963-491023:-1:exon

position:491023:-1
position: 491023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:489321-489382:-1:exon

position:489321:-1
position: 489321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489382:-1
position: 489382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:488930-489233:-1:exon

LOC100241601
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100241601
product: DET1- and DDB1-associated protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 87 samples with support for all annotated introns
transcript id: XM_019217495.1
SIO_010081: LOC100241601
subclass of: SO_0000673
so part of: LOC100241601
location: complement(join(488930..489233,490963..491023,493217..493424))
location: region:488930-493424:-1
so has part: feature:493217-493424:-1:exon
so has part: feature:490963-491023:-1:exon
so has part: feature:488930-489233:-1:exon

position:493424:-1
position: 493424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493217-493424:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:490963-491023:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:488930-489233:-1:exon

LOC100241601
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100241601
product: DET1- and DDB1-associated protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 147 samples with support for all annotated introns
transcript id: XM_010660074.2
SIO_010081: LOC100241601
subclass of: SO_0000673
so part of: LOC100241601
location: complement(join(488930..489233,489321..489382,490963..491020,493217..493422))
location: region:488930-493422:-1
so has part: feature:493217-493422:-1:exon
so has part: feature:490963-491020:-1:exon
so has part: feature:489321-489382:-1:exon
so has part: feature:488930-489233:-1:exon

position:493422:-1
position: 493422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493217-493422:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:490963-491020:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:489321-489382:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:488930-489233:-1:exon

LOC100241601
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100241601
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100241601 isoform X4
translation: MGSTLGDWPSFDPHNFSQLRPSDPSNPSMIPATYHPTHDRTLPPPDQVETKESCLRTPDTRAWMQATQSFCLRLSFSPLGSQISSSACI
SIO_010081: LOC100241601
subclass of: SO_0000673
so part of: LOC100241601
location: complement(join(489106..489233,490963..491020,493217..493300))
location: region:489106-493300:-1
so has part: feature:493217-493300:-1:exon
so has part: feature:490963-491020:-1:exon
so has part: feature:489106-489233:-1:exon

XP_019073042.1
type: Protein
SIO_000068: ncbiprotein

position:489106:-1
position: 489106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:493300:-1
position: 493300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493217-493300:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:490963-491020:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:489106-489233:-1:exon

LOC100241601
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100241601
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100241601 isoform X3
translation: MGSTLGDWPSFDPHNFSQLRPSDPSNPSKMIPATYHPTHDRTLPPPDQVETKESCLRTPDTRAWMQATQSFCLRLSFSPLGSQISSSACI
SIO_010081: LOC100241601
subclass of: SO_0000673
so part of: LOC100241601
location: complement(join(489106..489233,490963..491023,493217..493300))
location: region:489106-493300:-1
so has part: feature:493217-493300:-1:exon
so has part: feature:490963-491023:-1:exon
so has part: feature:489106-489233:-1:exon

XP_019073040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:493217-493300:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:490963-491023:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:489106-489233:-1:exon

LOC100241601
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100241601
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DET1- and DDB1-associated protein 1 isoform X2
translation: MGSTLGDWPSFDPHNFSQLRPSDPSNPSMIPATYHPTHDRTLPPPDQVISTETKNILLRHFYQRAEEKLRPKRAASEHLTPEHGCKQPRASASD
SIO_010081: LOC100241601
subclass of: SO_0000673
so part of: LOC100241601
location: complement(join(489153..489233,489321..489382,490963..491020,493217..493300))
location: region:489153-493300:-1
so has part: feature:493217-493300:-1:exon
so has part: feature:490963-491020:-1:exon
so has part: feature:489321-489382:-1:exon
so has part: feature:489153-489233:-1:exon

XP_010658376.1
type: Protein
SIO_000068: ncbiprotein

position:489153:-1
position: 489153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493217-493300:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:490963-491020:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:489321-489382:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:489153-489233:-1:exon

LOC100241601
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100241601
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DET1- and DDB1-associated protein 1 isoform X1
translation: MGSTLGDWPSFDPHNFSQLRPSDPSNPSKMIPATYHPTHDRTLPPPDQVISTETKNILLRHFYQRAEEKLRPKRAASEHLTPEHGCKQPRASASD
SIO_010081: LOC100241601
subclass of: SO_0000673
so part of: LOC100241601
location: complement(join(489153..489233,489321..489382,490963..491023,493217..493300))
location: region:489153-493300:-1
so has part: feature:493217-493300:-1:exon
so has part: feature:490963-491023:-1:exon
so has part: feature:489321-489382:-1:exon
so has part: feature:489153-489233:-1:exon

XP_002278358.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:493217-493300:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:490963-491023:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:489321-489382:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:489153-489233:-1:exon

LOC100246733
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100246733
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 495271..504972
location: region:495271-504972:1
so has part: feature:495271-504972:1:exon
subclass of: SO_0000010

100246733
type: Gene
SIO_000068: ncbigene

position:495271:1
position: 495271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504972:1
position: 504972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495271-504972:1:exon

LOC100246733
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100246733
product: G patch domain-containing protein 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 241 samples with support for all annotated introns
transcript id: XM_010660088.2
SIO_010081: LOC100246733
subclass of: SO_0000673
so part of: LOC100246733
location: join(495271..495435,495550..495634,495905..495981,496093..496120,496203..496296,496383..496449,497840..497936,503380..503558,503849..504076,504151..504267,504568..504972)
location: region:495271-504972:1
so has part: feature:495271-495435:1:exon
so has part: feature:495550-495634:1:exon
so has part: feature:495905-495981:1:exon
so has part: feature:496093-496120:1:exon
so has part: feature:496203-496296:1:exon
so has part: feature:496383-496449:1:exon
so has part: feature:497840-497936:1:exon
so has part: feature:503380-503558:1:exon
so has part: feature:503849-504076:1:exon
so has part: feature:504151-504267:1:exon
so has part: feature:504568-504972:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:495271-495435:1:exon

position:495435:1
position: 495435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:495550-495634:1:exon

position:495550:1
position: 495550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495634:1
position: 495634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:495905-495981:1:exon

position:495905:1
position: 495905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495981:1
position: 495981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:496093-496120:1:exon

position:496093:1
position: 496093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496120:1
position: 496120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:496203-496296:1:exon

position:496203:1
position: 496203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496296:1
position: 496296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:496383-496449:1:exon

position:496383:1
position: 496383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496449:1
position: 496449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:497840-497936:1:exon

position:497840:1
position: 497840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497936:1
position: 497936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:503380-503558:1:exon

position:503380:1
position: 503380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503558:1
position: 503558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:503849-504076:1:exon

position:503849:1
position: 503849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504076:1
position: 504076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:504151-504267:1:exon

position:504151:1
position: 504151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504267:1
position: 504267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:504568-504972:1:exon

position:504568:1
position: 504568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100246733
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100246733
product: G patch domain-containing protein 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 245 samples with support for all annotated introns
transcript id: XM_002278289.3
SIO_010081: LOC100246733
subclass of: SO_0000673
so part of: LOC100246733
location: join(495271..495435,495550..495634,495905..495981,496096..496120,496203..496296,496383..496449,497840..497936,503380..503558,503849..504076,504151..504267,504568..504972)
location: region:495271-504972:1
so has part: feature:495271-495435:1:exon
so has part: feature:495550-495634:1:exon
so has part: feature:495905-495981:1:exon
so has part: feature:496096-496120:1:exon
so has part: feature:496203-496296:1:exon
so has part: feature:496383-496449:1:exon
so has part: feature:497840-497936:1:exon
so has part: feature:503380-503558:1:exon
so has part: feature:503849-504076:1:exon
so has part: feature:504151-504267:1:exon
so has part: feature:504568-504972:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:495271-495435:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:495550-495634:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:495905-495981:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:496096-496120:1:exon

position:496096:1
position: 496096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:496203-496296:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:496383-496449:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:497840-497936:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:503380-503558:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:503849-504076:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:504151-504267:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:504568-504972:1:exon

LOC100246733
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100246733
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain-containing protein 4 isoform X1
translation: MAAPEAPLCYVGIARQSAAFRLMKQMGWEEGEGLGKDKQGIKGYVRVQNKQDTLGVGVEKPNNWAFDTAQFDSILKKLKVQQAVETNDEVDEKNDVQAGKESDASKDVKDPVVKVTRPQGRYKRREKGKLVHSYSSKDLEGILVKKVEDSPQTNPSQDAELGSDEESDIHVFNVEGNKDQSVSEDWWGHKYGFVSGGLLGASTKKRSRPTDSTQNFNKRTAFFEEDQENLYKLVQDKATTGKQGLGIKDRPKKVAGCYFEGKKTSFNDSDDEDASDYGSSAKSKQGDMFETEENGEPKVKLKRLCKQLLRQVPEKSLKLKQLKVLIDEHSPYIFSNFSSKRDALSYLKQKLEGSRKFSLKGKEVTLSSKRG
SIO_010081: LOC100246733
subclass of: SO_0000673
so part of: LOC100246733
location: join(495358..495435,495550..495634,495905..495981,496093..496120,496203..496296,496383..496449,497840..497936,503380..503558,503849..504076,504151..504267,504568..504633)
location: region:495358-504633:1
so has part: feature:495358-495435:1:exon
so has part: feature:495550-495634:1:exon
so has part: feature:495905-495981:1:exon
so has part: feature:496093-496120:1:exon
so has part: feature:496203-496296:1:exon
so has part: feature:496383-496449:1:exon
so has part: feature:497840-497936:1:exon
so has part: feature:503380-503558:1:exon
so has part: feature:503849-504076:1:exon
so has part: feature:504151-504267:1:exon
so has part: feature:504568-504633:1:exon

XP_010658390.1
type: Protein
SIO_000068: ncbiprotein

position:495358:1
position: 495358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504633:1
position: 504633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495358-495435:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:495550-495634:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:495905-495981:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:496093-496120:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:496203-496296:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:496383-496449:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:497840-497936:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:503380-503558:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:503849-504076:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:504151-504267:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:504568-504633:1:exon

LOC100246733
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100246733
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain-containing protein 4 isoform X2
translation: MAAPEAPLCYVGIARQSAAFRLMKQMGWEEGEGLGKDKQGIKGYVRVQNKQDTLGVGVEKPNNWAFDTAQFDSILKKLKVQAVETNDEVDEKNDVQAGKESDASKDVKDPVVKVTRPQGRYKRREKGKLVHSYSSKDLEGILVKKVEDSPQTNPSQDAELGSDEESDIHVFNVEGNKDQSVSEDWWGHKYGFVSGGLLGASTKKRSRPTDSTQNFNKRTAFFEEDQENLYKLVQDKATTGKQGLGIKDRPKKVAGCYFEGKKTSFNDSDDEDASDYGSSAKSKQGDMFETEENGEPKVKLKRLCKQLLRQVPEKSLKLKQLKVLIDEHSPYIFSNFSSKRDALSYLKQKLEGSRKFSLKGKEVTLSSKRG
SIO_010081: LOC100246733
subclass of: SO_0000673
so part of: LOC100246733
location: join(495358..495435,495550..495634,495905..495981,496096..496120,496203..496296,496383..496449,497840..497936,503380..503558,503849..504076,504151..504267,504568..504633)
location: region:495358-504633:1
so has part: feature:495358-495435:1:exon
so has part: feature:495550-495634:1:exon
so has part: feature:495905-495981:1:exon
so has part: feature:496096-496120:1:exon
so has part: feature:496203-496296:1:exon
so has part: feature:496383-496449:1:exon
so has part: feature:497840-497936:1:exon
so has part: feature:503380-503558:1:exon
so has part: feature:503849-504076:1:exon
so has part: feature:504151-504267:1:exon
so has part: feature:504568-504633:1:exon

XP_002278325.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:495358-495435:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:495550-495634:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:495905-495981:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:496096-496120:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:496203-496296:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:496383-496449:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:497840-497936:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:503380-503558:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:503849-504076:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:504151-504267:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:504568-504633:1:exon

LOC104881111
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC104881111
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(504873..509079)
location: region:504873-509079:-1
so has part: feature:504873-509079:-1:exon
subclass of: SO_0000010

104881111
type: Gene
SIO_000068: ncbigene

position:504873:-1
position: 504873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509079:-1
position: 509079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504873-509079:-1:exon

LOC104881111
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104881111
product: meiotic recombination protein SPO11-2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_010660080.2
SIO_010081: LOC104881111
subclass of: SO_0000673
so part of: LOC104881111
location: complement(join(504873..505147,505245..505372,505465..505541,505620..505682,505862..505956,506039..506167,507196..507284,507367..507504,507575..507704,508793..509079))
location: region:504873-509079:-1
so has part: feature:508793-509079:-1:exon
so has part: feature:507575-507704:-1:exon
so has part: feature:507367-507504:-1:exon
so has part: feature:507196-507284:-1:exon
so has part: feature:506039-506167:-1:exon
so has part: feature:505862-505956:-1:exon
so has part: feature:505620-505682:-1:exon
so has part: feature:505465-505541:-1:exon
so has part: feature:505245-505372:-1:exon
so has part: feature:504873-505147:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:508793-509079:-1:exon

position:508793:-1
position: 508793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:507575-507704:-1:exon

position:507575:-1
position: 507575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507704:-1
position: 507704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:507367-507504:-1:exon

position:507367:-1
position: 507367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507504:-1
position: 507504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:507196-507284:-1:exon

position:507196:-1
position: 507196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507284:-1
position: 507284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:506039-506167:-1:exon

position:506039:-1
position: 506039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:506167:-1
position: 506167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:505862-505956:-1:exon

position:505862:-1
position: 505862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505956:-1
position: 505956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:505620-505682:-1:exon

position:505620:-1
position: 505620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505682:-1
position: 505682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:505465-505541:-1:exon

position:505465:-1
position: 505465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505541:-1
position: 505541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:505245-505372:-1:exon

position:505245:-1
position: 505245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505372:-1
position: 505372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:504873-505147:-1:exon

position:505147:-1
position: 505147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104881111
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104881111
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: meiotic recombination protein SPO11-2
translation: MTIMMSHHDWQRRRLHSPKSVLLYFFFKFIVTPARTNQAMADLCRSSTFFSDQNLCNADIIGSSEARARIEVAVLNFLKILNSPSPAISDLPLISRRWSNSRVNRGLLTEVSCIFLSHSFCTRSLMRPNAAKAFVRVWKVVEMCFQILVQEKRVTQRELFYKLLCSSPQYFTCQLQVNRTIQDVVALLRCSRYSLGIMASSRGAVTGRLLLQEPNQETVDCSACGSSGHAISGDMNLLERMVMKTDARYIIVVEKHAIFQRLAEDRVFNQIPSILITAKGYPDIATRFLLYRMSRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGLEAYRYACNVKWLGLRGDDLQLIPEESLIPLKPRDLQIAKSLKSSEILEENYRNELEVMVQSGRRAEIEALYFRGYNFLGKYIAKKIVQANYV
SIO_010081: LOC104881111
subclass of: SO_0000673
so part of: LOC104881111
location: complement(join(505013..505147,505245..505372,505465..505541,505620..505682,505862..505956,506039..506167,507196..507284,507367..507504,507575..507704,508793..509071))
location: region:505013-509071:-1
so has part: feature:508793-509071:-1:exon
so has part: feature:507575-507704:-1:exon
so has part: feature:507367-507504:-1:exon
so has part: feature:507196-507284:-1:exon
so has part: feature:506039-506167:-1:exon
so has part: feature:505862-505956:-1:exon
so has part: feature:505620-505682:-1:exon
so has part: feature:505465-505541:-1:exon
so has part: feature:505245-505372:-1:exon
so has part: feature:505013-505147:-1:exon

XP_010658382.2
type: Protein
SIO_000068: ncbiprotein

position:505013:-1
position: 505013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509071:-1
position: 509071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508793-509071:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:507575-507704:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:507367-507504:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:507196-507284:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:506039-506167:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:505862-505956:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:505620-505682:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:505465-505541:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:505245-505372:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:505013-505147:-1:exon

LOC100251862
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100251862
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 512135..513765
location: region:512135-513765:1
so has part: feature:512135-513765:1:exon
subclass of: SO_0000010

100251862
type: Gene
SIO_000068: ncbigene

position:512135:1
position: 512135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513765:1
position: 513765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512135-513765:1:exon

LOC100251862
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100251862
product: WRKY transcription factor 22, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 98 samples with support for all annotated introns
transcript id: XM_002278185.3
SIO_010081: LOC100251862
subclass of: SO_0000673
so part of: LOC100251862
location: join(512135..512608,512713..512829,512928..513765)
location: region:512135-513765:1
so has part: feature:512135-512608:1:exon
so has part: feature:512713-512829:1:exon
so has part: feature:512928-513765:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:512135-512608:1:exon

position:512608:1
position: 512608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:512713-512829:1:exon

position:512713:1
position: 512713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512829:1
position: 512829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:512928-513765:1:exon

position:512928:1
position: 512928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100251862
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100251862
product: WRKY transcription factor 22, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 125 samples with support for all annotated introns
transcript id: XM_010660100.2
SIO_010081: LOC100251862
subclass of: SO_0000673
so part of: LOC100251862
location: join(512136..512608,512716..512829,512928..513765)
location: region:512136-513765:1
so has part: feature:512136-512608:1:exon
so has part: feature:512716-512829:1:exon
so has part: feature:512928-513765:1:exon

position:512136:1
position: 512136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512136-512608:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:512716-512829:1:exon

position:512716:1
position: 512716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:512928-513765:1:exon

LOC100251862
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100251862
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WRKY transcription factor 22 isoform X1
translation: MMSEFLGMGDWDLQSVVRGCAINEASSAAFMDTSLPCFGPLAIQQDELLFSFPDFFETTTVLDELEQLYKPFYPVLQPLSPVRTAAAPSISMEDPKKMKGQDHLPGTADNGGGGPGSHGAKPKKSRKNQQKRVVQHVTAEGLSSDVWAWRKYGQKPIKGSPYPRSYYRCSSLKGCLARKQVERSRTDPEIFIVTYTAEHSHSHPTRRNSLAGITRNKFSTPKKPSKAEPPSTPTTVANDSSSSPISTSDFSATTPLMSAMEDELQPYVSQQEIRGEEDQKLNERNNTNEVHISDEILNNDFFLGLEDMDFSVQFPSSFLQPWFAATAAGGC
SIO_010081: LOC100251862
subclass of: SO_0000673
so part of: LOC100251862
location: join(512235..512608,512713..512829,512928..513432)
location: region:512235-513432:1
so has part: feature:512235-512608:1:exon
so has part: feature:512713-512829:1:exon
so has part: feature:512928-513432:1:exon

XP_002278221.1
type: Protein
SIO_000068: ncbiprotein

position:512235:1
position: 512235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513432:1
position: 513432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512235-512608:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:512713-512829:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:512928-513432:1:exon

LOC100251862
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100251862
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WRKY transcription factor 22 isoform X2
translation: MMSEFLGMGDWDLQSVVRGCAINEASSAAFMDTSLPCFGPLAIQQDELLFSFPDFFETTTVLDELEQLYKPFYPVLQPLSPVRTAAAPSISMEDPKKMKGQDHLPGTADNGGGGPGSHGAKPKKRKNQQKRVVQHVTAEGLSSDVWAWRKYGQKPIKGSPYPRSYYRCSSLKGCLARKQVERSRTDPEIFIVTYTAEHSHSHPTRRNSLAGITRNKFSTPKKPSKAEPPSTPTTVANDSSSSPISTSDFSATTPLMSAMEDELQPYVSQQEIRGEEDQKLNERNNTNEVHISDEILNNDFFLGLEDMDFSVQFPSSFLQPWFAATAAGGC
SIO_010081: LOC100251862
subclass of: SO_0000673
so part of: LOC100251862
location: join(512235..512608,512716..512829,512928..513432)
location: region:512235-513432:1
so has part: feature:512235-512608:1:exon
so has part: feature:512716-512829:1:exon
so has part: feature:512928-513432:1:exon

XP_010658402.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:512235-512608:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:512716-512829:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:512928-513432:1:exon

LOC100255237
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100255237
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(515907..519414)
location: region:515907-519414:-1
so has part: feature:515907-519414:-1:exon
subclass of: SO_0000010

100255237
type: Gene
SIO_000068: ncbigene

position:515907:-1
position: 515907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519414:-1
position: 519414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515907-519414:-1:exon

LOC100255237
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100255237
product: endoglucanase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_010660105.2
SIO_010081: LOC100255237
subclass of: SO_0000673
so part of: LOC100255237
location: complement(join(515907..516407,516534..516700,516782..516890,517388..517540,517622..517699,517781..517981,518499..518711,519143..519414))
location: region:515907-519414:-1
so has part: feature:519143-519414:-1:exon
so has part: feature:518499-518711:-1:exon
so has part: feature:517781-517981:-1:exon
so has part: feature:517622-517699:-1:exon
so has part: feature:517388-517540:-1:exon
so has part: feature:516782-516890:-1:exon
so has part: feature:516534-516700:-1:exon
so has part: feature:515907-516407:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:519143-519414:-1:exon

position:519143:-1
position: 519143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:518499-518711:-1:exon

position:518499:-1
position: 518499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518711:-1
position: 518711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:517781-517981:-1:exon

position:517781:-1
position: 517781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517981:-1
position: 517981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:517622-517699:-1:exon

position:517622:-1
position: 517622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517699:-1
position: 517699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:517388-517540:-1:exon

position:517388:-1
position: 517388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517540:-1
position: 517540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:516782-516890:-1:exon

position:516782:-1
position: 516782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516890:-1
position: 516890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:516534-516700:-1:exon

position:516534:-1
position: 516534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516700:-1
position: 516700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:515907-516407:-1:exon

position:516407:-1
position: 516407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100255237
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100255237
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoglucanase
translation: MGYGGMVWGLVLWCVLASRNGVAMEDERLLGLGHDYGEALGKAILFFEGQRSGKLPSSQRVKWRGDSALSDGMPENVKLIGGYYDAGDNVKFGWPMAFSVSLLSWAAVEYRREISSVKQLTYLLQAIRWGANFILRAHTSSTTLYTQVGDGNNDHQCWERPEDMDTPRTLYKINSTSPGTEAAAEAAAALSAASIAFKGVDSNYSATLLKRSKLLFEFADKYRGSYQASCPFYCSYSGYQDELLWAAAWLYKASGETRYLNYVSSNQGWSQAVTEFSWDNKFVGAQTLLAKEFFDGTKDLGKFKTDADSFVCALMPGSSSVQIRTTPGGLLYTRDGNNLQYVTTSSMVLLIYSKTLAAAQIGGVQCGSAHFPTSQIRAFAKSQVDYILGNNPKKMSYMLGYGSKYPTQLHHRGASIPSIHALPDKVGCNQGYSSWYSSTEPNPNTHVGAIVGGPNSDDQFSDVRSDYSHSEPTTYANAAFVGSVAALVHKTRAELPRADGADE
SIO_010081: LOC100255237
subclass of: SO_0000673
so part of: LOC100255237
location: complement(join(516045..516407,516534..516700,516782..516890,517388..517540,517622..517699,517781..517981,518499..518711,519143..519370))
location: region:516045-519370:-1
so has part: feature:519143-519370:-1:exon
so has part: feature:518499-518711:-1:exon
so has part: feature:517781-517981:-1:exon
so has part: feature:517622-517699:-1:exon
so has part: feature:517388-517540:-1:exon
so has part: feature:516782-516890:-1:exon
so has part: feature:516534-516700:-1:exon
so has part: feature:516045-516407:-1:exon

XP_010658407.1
type: Protein
SIO_000068: ncbiprotein

position:516045:-1
position: 516045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519370:-1
position: 519370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519143-519370:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:518499-518711:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:517781-517981:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:517622-517699:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:517388-517540:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:516782-516890:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:516534-516700:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:516045-516407:-1:exon

LOC100260315
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100260315
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(520824..533830)
location: region:520824-533830:-1
so has part: feature:520824-533830:-1:exon
subclass of: SO_0000010

100260315
type: Gene
SIO_000068: ncbigene

position:520824:-1
position: 520824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533830:-1
position: 533830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520824-533830:-1:exon

LOC100260315
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100260315
product: uncharacterized LOC100260315, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 122 samples with support for all annotated introns
transcript id: XM_010660110.2
SIO_010081: LOC100260315
subclass of: SO_0000673
so part of: LOC100260315
location: complement(join(520824..521567,521782..521988,522844..522967,523857..524059,525721..526533,527360..527429,530093..530196,530280..533003,533478..533829))
location: region:520824-533829:-1
so has part: feature:533478-533829:-1:exon
so has part: feature:530280-533003:-1:exon
so has part: feature:530093-530196:-1:exon
so has part: feature:527360-527429:-1:exon
so has part: feature:525721-526533:-1:exon
so has part: feature:523857-524059:-1:exon
so has part: feature:522844-522967:-1:exon
so has part: feature:521782-521988:-1:exon
so has part: feature:520824-521567:-1:exon

position:533829:-1
position: 533829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533478-533829:-1:exon

position:533478:-1
position: 533478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:530280-533003:-1:exon

position:530280:-1
position: 530280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533003:-1
position: 533003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:530093-530196:-1:exon

position:530093:-1
position: 530093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530196:-1
position: 530196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:527360-527429:-1:exon

position:527360:-1
position: 527360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527429:-1
position: 527429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:525721-526533:-1:exon

position:525721:-1
position: 525721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526533:-1
position: 526533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:523857-524059:-1:exon

position:523857:-1
position: 523857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524059:-1
position: 524059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:522844-522967:-1:exon

position:522844:-1
position: 522844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522967:-1
position: 522967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:521782-521988:-1:exon

position:521782:-1
position: 521782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521988:-1
position: 521988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:520824-521567:-1:exon

position:521567:-1
position: 521567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100260315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100260315
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100260315 isoform X1
translation: MKCRSVACIWSGAPPYHRITAAAVLTRPPSLYTGGSDGSIVWWNLSGTDSDPEIKPIAMLCGHAAPLADLGICFPIVDNSSNVKVKSIPADHGALISACTDGVLCTWSRGSGHCRRRRKMPPWVGSPSMIRALPTNPRYVCIACSFMDAVHLFDQHSVDLVEGGEASLDRESQYRKPPKCTVVIVDSYSLTIVQTVFHGNLSIGPLKFMAVILSPENCEMQSALMVDPYGKLQSVPILKDPTLGGESGAGLHKSSSHLDTTIWEDGLSEGGPVVSIATHGQFFVLVYRTCCIFRLLASGTAIGKISFVDNHLCFEDGSTHLHIVGGMFLEGNDASSMPRSEDPCDITEENFIVWNDRGSAIVYSVSYLDNLFNFQPLCEIPAVSHPHDARLSISFIQLNHYLFRIESVCFHIEEPLLWKPLVTIWSLYQQHDDNRKLCPQCKMVGRGGLFTDSVVGFASFHKSEGHGHDVGIEPTGRETELTSQKSTIPSLEKMNNICRDDEKYSFVRKEQVVSSSMVISENFHTPYAVVYGFYSGEIEVARFDTFFQLLESHGQSPCVEVDSHASKQYFLGHTGAVLCLAAHRMVGNSNGWNFNHVLVSGSMDCTIRVWDLDTSNLITVMHQHVASVRQIILCPPRTDRPWSDCFLSVGEDFCVALTSLETLRVERMFPGHPSYPAKVVWDGARGYIACLCRNYSGTSDAVDVLFIWDMKTGVRERVLRGTASHSMFDNFFKGINMNSISGSVLNGDTSASSLLLPIIEDASLLQSHFKHSVKGIALSNTITTNISEPSTSQAHVNEGSSMKLISTSSSVFQGYKHPVKCSCPFPGIATLSFDLASLMSHCLKHEFIGNGGDKQDNTHMREPGTETLKPHHMTADDGSDLNGTLNNTIEGHDWISSLERYLLQFSLSFLHLWDVDSELDKLLITDMKLERPQKFIVSPGFQGDRGSLTLTFPGLGASLELLKSSSEFCAMRSLTMVSLAQRIVSLSHSSSAGCSALAAFYTRHFAEKIPDIKPPSLQLLVSFWQDESEHVRMAARSLFHCAAARAIPPPLCSRKAIDHTKLMISTNSKRANEDGSSNIENAYRDGLNSDTPPETPGDSQVEECKILAWLESFEEQDWISCVGGTSQDAMTSHIIVAAALAIWYPSLVKQNLAMLTVHPLMKLVMAMNEKYSSTAAELLAEGMESTWKECIGSEIPRLVGDIFFQIECVSGTSGNSAAQNPAIPVTIRETLVGVLLPSLAMADIPGFLSVIESQIWSTASDSPVHLVSLMTLIRVVRGSPRNLIQSLDKVVNFILQTMDPGNSVMRRTCLQSSMTALKEVVRVFPMVAQNDSSTRLAVGDAIGEINNASIRIYDLQSVTKIKVLDASAPPGLPSLLSGASETTLTTAISALSFSPDGEGLVAFSEHGLMIRWWSLGSAWWEKLGRNFVPVQYTKLIFVPPWEGMSPNSSRSSVMASILGHDRQANSQENTKGSGDMDCLKVLIHNIDLSYRLEWVGERRVLILRHGRELGTFQL
SIO_010081: LOC100260315
subclass of: SO_0000673
so part of: LOC100260315
location: complement(join(521424..521567,521782..521988,522844..522967,523857..524059,525721..526533,527360..527429,530093..530196,530280..533003,533478..533633))
location: region:521424-533633:-1
so has part: feature:533478-533633:-1:exon
so has part: feature:530280-533003:-1:exon
so has part: feature:530093-530196:-1:exon
so has part: feature:527360-527429:-1:exon
so has part: feature:525721-526533:-1:exon
so has part: feature:523857-524059:-1:exon
so has part: feature:522844-522967:-1:exon
so has part: feature:521782-521988:-1:exon
so has part: feature:521424-521567:-1:exon

XP_010658412.1
type: Protein
SIO_000068: ncbiprotein

position:521424:-1
position: 521424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533633:-1
position: 533633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533478-533633:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:530280-533003:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:530093-530196:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:527360-527429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:525721-526533:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:523857-524059:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:522844-522967:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:521782-521988:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:521424-521567:-1:exon

LOC100260315
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100260315
product: uncharacterized LOC100260315, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_019216327.1
SIO_010081: LOC100260315
subclass of: SO_0000673
so part of: LOC100260315
location: complement(join(521876..521988,523857..524059,525721..526533,527360..527429,530093..530196,530280..533003,533478..533829))
location: region:521876-533829:-1
so has part: feature:533478-533829:-1:exon
so has part: feature:530280-533003:-1:exon
so has part: feature:530093-530196:-1:exon
so has part: feature:527360-527429:-1:exon
so has part: feature:525721-526533:-1:exon
so has part: feature:523857-524059:-1:exon
so has part: feature:521876-521988:-1:exon

position:521876:-1
position: 521876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533478-533829:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:530280-533003:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:530093-530196:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:527360-527429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:525721-526533:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:523857-524059:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:521876-521988:-1:exon

LOC100260315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100260315
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100260315 isoform X2
translation: MKCRSVACIWSGAPPYHRITAAAVLTRPPSLYTGGSDGSIVWWNLSGTDSDPEIKPIAMLCGHAAPLADLGICFPIVDNSSNVKVKSIPADHGALISACTDGVLCTWSRGSGHCRRRRKMPPWVGSPSMIRALPTNPRYVCIACSFMDAVHLFDQHSVDLVEGGEASLDRESQYRKPPKCTVVIVDSYSLTIVQTVFHGNLSIGPLKFMAVILSPENCEMQSALMVDPYGKLQSVPILKDPTLGGESGAGLHKSSSHLDTTIWEDGLSEGGPVVSIATHGQFFVLVYRTCCIFRLLASGTAIGKISFVDNHLCFEDGSTHLHIVGGMFLEGNDASSMPRSEDPCDITEENFIVWNDRGSAIVYSVSYLDNLFNFQPLCEIPAVSHPHDARLSISFIQLNHYLFRIESVCFHIEEPLLWKPLVTIWSLYQQHDDNRKLCPQCKMVGRGGLFTDSVVGFASFHKSEGHGHDVGIEPTGRETELTSQKSTIPSLEKMNNICRDDEKYSFVRKEQVVSSSMVISENFHTPYAVVYGFYSGEIEVARFDTFFQLLESHGQSPCVEVDSHASKQYFLGHTGAVLCLAAHRMVGNSNGWNFNHVLVSGSMDCTIRVWDLDTSNLITVMHQHVASVRQIILCPPRTDRPWSDCFLSVGEDFCVALTSLETLRVERMFPGHPSYPAKVVWDGARGYIACLCRNYSGTSDAVDVLFIWDMKTGVRERVLRGTASHSMFDNFFKGINMNSISGSVLNGDTSASSLLLPIIEDASLLQSHFKHSVKGIALSNTITTNISEPSTSQAHVNEGSSMKLISTSSSVFQGYKHPVKCSCPFPGIATLSFDLASLMSHCLKHEFIGNGGDKQDNTHMREPGTETLKPHHMTADDGSDLNGTLNNTIEGHDWISSLERYLLQFSLSFLHLWDVDSELDKLLITDMKLERPQKFIVSPGFQGDRGSLTLTFPGLGASLELLKSSSEFCAMRSLTMVSLAQRIVSLSHSSSAGCSALAAFYTRHFAEKIPDIKPPSLQLLVSFWQDESEHVRMAARSLFHCAAARAIPPPLCSRKAIDHTKLMISTNSKRANEDGSSNIENAYRDGLNSDTPPETPGDSQVEECKILAWLESFEEQDWISCVGGTSQDAMTSHIIVAAALAIWYPSLVKQNLAMLTVHPLMKLVMAMNEKYSSTAAELLAEGMESTWKECIGSEIPRLVGDIFFQIECVSGTSGNSAAQNPAIPVTIRETLVGVLLPSLAMADIPGFLSVIESQIWSTASDSPVHLVSLMTLIRVVRGSPRNLIQSLDKVVNFILQTMDPGNSVMRRTCLQSSMTALKEVVRVFPMVAQNDSSTRLAVGDAIGEINNASIRIYDLQRG
SIO_010081: LOC100260315
subclass of: SO_0000673
so part of: LOC100260315
location: complement(join(521982..521988,523857..524059,525721..526533,527360..527429,530093..530196,530280..533003,533478..533633))
location: region:521982-533633:-1
so has part: feature:533478-533633:-1:exon
so has part: feature:530280-533003:-1:exon
so has part: feature:530093-530196:-1:exon
so has part: feature:527360-527429:-1:exon
so has part: feature:525721-526533:-1:exon
so has part: feature:523857-524059:-1:exon
so has part: feature:521982-521988:-1:exon

XP_019071872.1
type: Protein
SIO_000068: ncbiprotein

position:521982:-1
position: 521982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533478-533633:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:530280-533003:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:530093-530196:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:527360-527429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:525721-526533:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:523857-524059:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:521982-521988:-1:exon

LOC100260315
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100260315
product: uncharacterized LOC100260315, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 119 samples with support for all annotated introns
transcript id: XM_010660116.2
SIO_010081: LOC100260315
subclass of: SO_0000673
so part of: LOC100260315
location: complement(join(523868..524067,525721..526533,527360..527429,530093..530196,530280..533003,533478..533830))
location: region:523868-533830:-1
so has part: feature:533478-533830:-1:exon
so has part: feature:530280-533003:-1:exon
so has part: feature:530093-530196:-1:exon
so has part: feature:527360-527429:-1:exon
so has part: feature:525721-526533:-1:exon
so has part: feature:523868-524067:-1:exon

position:523868:-1
position: 523868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533478-533830:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:530280-533003:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:530093-530196:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:527360-527429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:525721-526533:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:523868-524067:-1:exon

position:524067:-1
position: 524067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100260315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100260315
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100260315 isoform X3
translation: MKCRSVACIWSGAPPYHRITAAAVLTRPPSLYTGGSDGSIVWWNLSGTDSDPEIKPIAMLCGHAAPLADLGICFPIVDNSSNVKVKSIPADHGALISACTDGVLCTWSRGSGHCRRRRKMPPWVGSPSMIRALPTNPRYVCIACSFMDAVHLFDQHSVDLVEGGEASLDRESQYRKPPKCTVVIVDSYSLTIVQTVFHGNLSIGPLKFMAVILSPENCEMQSALMVDPYGKLQSVPILKDPTLGGESGAGLHKSSSHLDTTIWEDGLSEGGPVVSIATHGQFFVLVYRTCCIFRLLASGTAIGKISFVDNHLCFEDGSTHLHIVGGMFLEGNDASSMPRSEDPCDITEENFIVWNDRGSAIVYSVSYLDNLFNFQPLCEIPAVSHPHDARLSISFIQLNHYLFRIESVCFHIEEPLLWKPLVTIWSLYQQHDDNRKLCPQCKMVGRGGLFTDSVVGFASFHKSEGHGHDVGIEPTGRETELTSQKSTIPSLEKMNNICRDDEKYSFVRKEQVVSSSMVISENFHTPYAVVYGFYSGEIEVARFDTFFQLLESHGQSPCVEVDSHASKQYFLGHTGAVLCLAAHRMVGNSNGWNFNHVLVSGSMDCTIRVWDLDTSNLITVMHQHVASVRQIILCPPRTDRPWSDCFLSVGEDFCVALTSLETLRVERMFPGHPSYPAKVVWDGARGYIACLCRNYSGTSDAVDVLFIWDMKTGVRERVLRGTASHSMFDNFFKGINMNSISGSVLNGDTSASSLLLPIIEDASLLQSHFKHSVKGIALSNTITTNISEPSTSQAHVNEGSSMKLISTSSSVFQGYKHPVKCSCPFPGIATLSFDLASLMSHCLKHEFIGNGGDKQDNTHMREPGTETLKPHHMTADDGSDLNGTLNNTIEGHDWISSLERYLLQFSLSFLHLWDVDSELDKLLITDMKLERPQKFIVSPGFQGDRGSLTLTFPGLGASLELLKSSSEFCAMRSLTMVSLAQRIVSLSHSSSAGCSALAAFYTRHFAEKIPDIKPPSLQLLVSFWQDESEHVRMAARSLFHCAAARAIPPPLCSRKAIDHTKLMISTNSKRANEDGSSNIENAYRDGLNSDTPPETPGDSQVEECKILAWLESFEEQDWISCVGGTSQDAMTSHIIVAAALAIWYPSLVKQNLAMLTVHPLMKLVMAMNEKYSSTAAELLAEGMESTWKECIGSEIPRLVGDIFFQIECVSGTSGNSAAQNPAIPVTIRETLVGVLLPSLAMADIPGFLSVIESQIWSTASDSPVHLVSLMTLIRVVRGSPRNLIQSLDKICRWLTSFYKLWTLEIQSCAGLAFKVQ
SIO_010081: LOC100260315
subclass of: SO_0000673
so part of: LOC100260315
location: complement(join(523984..524067,525721..526533,527360..527429,530093..530196,530280..533003,533478..533633))
location: region:523984-533633:-1
so has part: feature:533478-533633:-1:exon
so has part: feature:530280-533003:-1:exon
so has part: feature:530093-530196:-1:exon
so has part: feature:527360-527429:-1:exon
so has part: feature:525721-526533:-1:exon
so has part: feature:523984-524067:-1:exon

XP_010658418.1
type: Protein
SIO_000068: ncbiprotein

position:523984:-1
position: 523984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533478-533633:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:530280-533003:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:530093-530196:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:527360-527429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:525721-526533:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:523984-524067:-1:exon

LOC100265531
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100265531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 537301..544880
location: region:537301-544880:1
so has part: feature:537301-544880:1:exon
subclass of: SO_0000010

100265531
type: Gene
SIO_000068: ncbigene

position:537301:1
position: 537301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544880:1
position: 544880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:537301-544880:1:exon

LOC100265531
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100265531
product: protein SGT1 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_019225987.1
SIO_010081: LOC100265531
subclass of: SO_0000673
so part of: LOC100265531
location: join(537301..537539,537778..537847,538922..539046,541603..541666,542400..542496,542700..542765,543296..543401,543700..543776,543967..544039,544801..544880)
location: region:537301-544880:1
so has part: feature:537301-537539:1:exon
so has part: feature:537778-537847:1:exon
so has part: feature:538922-539046:1:exon
so has part: feature:541603-541666:1:exon
so has part: feature:542400-542496:1:exon
so has part: feature:542700-542765:1:exon
so has part: feature:543296-543401:1:exon
so has part: feature:543700-543776:1:exon
so has part: feature:543967-544039:1:exon
so has part: feature:544801-544880:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:537301-537539:1:exon

position:537539:1
position: 537539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:537778-537847:1:exon

position:537778:1
position: 537778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537847:1
position: 537847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:538922-539046:1:exon

position:538922:1
position: 538922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539046:1
position: 539046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:541603-541666:1:exon

position:541603:1
position: 541603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541666:1
position: 541666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:542400-542496:1:exon

position:542400:1
position: 542400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542496:1
position: 542496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:542700-542765:1:exon

position:542700:1
position: 542700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542765:1
position: 542765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:543296-543401:1:exon

position:543296:1
position: 543296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543401:1
position: 543401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:543700-543776:1:exon

position:543700:1
position: 543700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543776:1
position: 543776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:543967-544039:1:exon

position:543967:1
position: 543967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544039:1
position: 544039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:544801-544880:1:exon

position:544801:1
position: 544801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100265531
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100265531
product: protein SGT1 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_019225990.1
SIO_010081: LOC100265531
subclass of: SO_0000673
so part of: LOC100265531
location: join(537301..537539,537778..537847,538922..539046,541603..541666,542400..542472,542700..542765,543296..543401,543700..543776,543967..544039,544801..544880)
location: region:537301-544880:1
so has part: feature:537301-537539:1:exon
so has part: feature:537778-537847:1:exon
so has part: feature:538922-539046:1:exon
so has part: feature:541603-541666:1:exon
so has part: feature:542400-542472:1:exon
so has part: feature:542700-542765:1:exon
so has part: feature:543296-543401:1:exon
so has part: feature:543700-543776:1:exon
so has part: feature:543967-544039:1:exon
so has part: feature:544801-544880:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:537301-537539:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:537778-537847:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:538922-539046:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541603-541666:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:542400-542472:1:exon

position:542472:1
position: 542472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:542700-542765:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:543296-543401:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:543700-543776:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:543967-544039:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:544801-544880:1:exon

LOC100265531
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100265531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SGT1 homolog isoform X1
translation: MAVELERKAGVAFIDEDYKLAVDLFSKALKIRPNNAELLASRAQANIMLHDYLEAVGDAIKAIQLDPSMAKAYLRKGIACFKLEEYQTAKVALEKGVRFAQNDPRFAKLIKECNDCIAVENASITVGRGASTALAKPKYRHEYYQKPEEVVVTIFAKGIPENNVVVHFAVQTLSVAIEVPGLTPYYLHLRLFGKIIPDNSRYAVMSTKVEIRLAKAEALNWPSLEISDKDQRPTNPSSKAKVIDWDKLQAQIEEEEKEEELKDDATRNADTQRTMNKKT
SIO_010081: LOC100265531
subclass of: SO_0000673
so part of: LOC100265531
location: join(537380..537539,537778..537847,538922..539046,541603..541666,542400..542496,542700..542765,543296..543401,543700..543776,543967..544039,544801..544802)
location: region:537380-544802:1
so has part: feature:537380-537539:1:exon
so has part: feature:537778-537847:1:exon
so has part: feature:538922-539046:1:exon
so has part: feature:541603-541666:1:exon
so has part: feature:542400-542496:1:exon
so has part: feature:542700-542765:1:exon
so has part: feature:543296-543401:1:exon
so has part: feature:543700-543776:1:exon
so has part: feature:543967-544039:1:exon
so has part: feature:544801-544802:1:exon

XP_019081532.1
type: Protein
SIO_000068: ncbiprotein

position:537380:1
position: 537380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544802:1
position: 544802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:537380-537539:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:537778-537847:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:538922-539046:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541603-541666:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:542400-542496:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:542700-542765:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:543296-543401:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:543700-543776:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:543967-544039:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:544801-544802:1:exon

LOC100265531
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100265531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SGT1 homolog A isoform X2
translation: MAVELERKAGVAFIDEDYKLAVDLFSKALKIRPNNAELLASRAQANIMLHDYLEAVGDAIKAIQLDPSMAKAYLRKGIACFKLEEYQTAKVALEKGVRFAQNDPRFAKLIKECNDCIAVENASITVGRGASTALAKPKYRHEYYQKPEEVVVTIFAKGIPENNVLSVAIEVPGLTPYYLHLRLFGKIIPDNSRYAVMSTKVEIRLAKAEALNWPSLEISDKDQRPTNPSSKAKVIDWDKLQAQIEEEEKEEELKDDATRNADTQRTMNKKT
SIO_010081: LOC100265531
subclass of: SO_0000673
so part of: LOC100265531
location: join(537380..537539,537778..537847,538922..539046,541603..541666,542400..542472,542700..542765,543296..543401,543700..543776,543967..544039,544801..544802)
location: region:537380-544802:1
so has part: feature:537380-537539:1:exon
so has part: feature:537778-537847:1:exon
so has part: feature:538922-539046:1:exon
so has part: feature:541603-541666:1:exon
so has part: feature:542400-542472:1:exon
so has part: feature:542700-542765:1:exon
so has part: feature:543296-543401:1:exon
so has part: feature:543700-543776:1:exon
so has part: feature:543967-544039:1:exon
so has part: feature:544801-544802:1:exon

XP_019081535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:537380-537539:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:537778-537847:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:538922-539046:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541603-541666:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:542400-542472:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:542700-542765:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:543296-543401:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:543700-543776:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:543967-544039:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:544801-544802:1:exon

LOC104881117
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC104881117
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(544665..545367)
location: region:544665-545367:-1
so has part: feature:544665-545367:-1:exon
subclass of: SO_0000011

104881117
type: Gene
SIO_000068: ncbigene

position:544665:-1
position: 544665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545367:-1
position: 545367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544665-545367:-1:exon

LOC104881117
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 29760
nc RNA class: lncRNA
gene: LOC104881117
product: uncharacterized LOC104881117
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_787130.2
SIO_010081: LOC104881117
subclass of: SO_0000673
so part of: LOC104881117
location: complement(join(544665..544682,544772..545099,545205..545367))
location: region:544665-545367:-1
so has part: feature:545205-545367:-1:exon
so has part: feature:544772-545099:-1:exon
so has part: feature:544665-544682:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:545205-545367:-1:exon

position:545205:-1
position: 545205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:544772-545099:-1:exon

position:544772:-1
position: 544772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545099:-1
position: 545099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:544665-544682:-1:exon

position:544682:-1
position: 544682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100243215
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100243215
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(557051..571108)
location: region:557051-571108:-1
so has part: feature:557051-571108:-1:exon
subclass of: SO_0000010

100243215
type: Gene
SIO_000068: ncbigene

position:557051:-1
position: 557051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:571108:-1
position: 571108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557051-571108:-1:exon

LOC100243215
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100243215
product: E4 SUMO-protein ligase PIAL1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_019216334.1
SIO_010081: LOC100243215
subclass of: SO_0000673
so part of: LOC100243215
location: complement(join(557051..558308,558627..559514,559588..559704,560412..560463,562435..562486,562665..562766,562860..562944,563066..563114,563201..563268,563693..563744,563865..563947,564100..564165,567267..567332,568787..568859,570237..571108))
location: region:557051-571108:-1
so has part: feature:570237-571108:-1:exon
so has part: feature:568787-568859:-1:exon
so has part: feature:567267-567332:-1:exon
so has part: feature:564100-564165:-1:exon
so has part: feature:563865-563947:-1:exon
so has part: feature:563693-563744:-1:exon
so has part: feature:563201-563268:-1:exon
so has part: feature:563066-563114:-1:exon
so has part: feature:562860-562944:-1:exon
so has part: feature:562665-562766:-1:exon
so has part: feature:562435-562486:-1:exon
so has part: feature:560412-560463:-1:exon
so has part: feature:559588-559704:-1:exon
so has part: feature:558627-559514:-1:exon
so has part: feature:557051-558308:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:570237-571108:-1:exon

position:570237:-1
position: 570237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:568787-568859:-1:exon

position:568787:-1
position: 568787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568859:-1
position: 568859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:567267-567332:-1:exon

position:567267:-1
position: 567267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567332:-1
position: 567332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:564100-564165:-1:exon

position:564100:-1
position: 564100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564165:-1
position: 564165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:563865-563947:-1:exon

position:563865:-1
position: 563865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563947:-1
position: 563947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:563693-563744:-1:exon

position:563693:-1
position: 563693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563744:-1
position: 563744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:563201-563268:-1:exon

position:563201:-1
position: 563201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563268:-1
position: 563268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:563066-563114:-1:exon

position:563066:-1
position: 563066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563114:-1
position: 563114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:562860-562944:-1:exon

position:562860:-1
position: 562860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562944:-1
position: 562944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:562665-562766:-1:exon

position:562665:-1
position: 562665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562766:-1
position: 562766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:562435-562486:-1:exon

position:562435:-1
position: 562435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562486:-1
position: 562486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:560412-560463:-1:exon

position:560412:-1
position: 560412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560463:-1
position: 560463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:559588-559704:-1:exon

position:559588:-1
position: 559588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559704:-1
position: 559704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:558627-559514:-1:exon

position:558627:-1
position: 558627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559514:-1
position: 559514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:557051-558308:-1:exon

position:558308:-1
position: 558308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100243215
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100243215
product: E4 SUMO-protein ligase PIAL1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 142 samples with support for all annotated introns
transcript id: XM_010660133.2
SIO_010081: LOC100243215
subclass of: SO_0000673
so part of: LOC100243215
location: complement(join(557051..558308,558627..559514,559588..559704,560412..560463,562435..562486,562665..562766,562860..562944,563066..563114,563201..563268,563525..563596,563693..563744,563865..563947,564100..564165,567267..567332,568787..568859,570237..571108))
location: region:557051-571108:-1
so has part: feature:570237-571108:-1:exon
so has part: feature:568787-568859:-1:exon
so has part: feature:567267-567332:-1:exon
so has part: feature:564100-564165:-1:exon
so has part: feature:563865-563947:-1:exon
so has part: feature:563693-563744:-1:exon
so has part: feature:563525-563596:-1:exon
so has part: feature:563201-563268:-1:exon
so has part: feature:563066-563114:-1:exon
so has part: feature:562860-562944:-1:exon
so has part: feature:562665-562766:-1:exon
so has part: feature:562435-562486:-1:exon
so has part: feature:560412-560463:-1:exon
so has part: feature:559588-559704:-1:exon
so has part: feature:558627-559514:-1:exon
so has part: feature:557051-558308:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:570237-571108:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:568787-568859:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:567267-567332:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:564100-564165:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:563865-563947:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:563693-563744:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:563525-563596:-1:exon

position:563525:-1
position: 563525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563596:-1
position: 563596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:563201-563268:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:563066-563114:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:562860-562944:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:562665-562766:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:562435-562486:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:560412-560463:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:559588-559704:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:558627-559514:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:557051-558308:-1:exon

LOC100243215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100243215
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E4 SUMO-protein ligase PIAL1 isoform X2
translation: MTGATISLPTSVSNIAGVETTSTSYSASLANSFRLNAVLERLAMHVRSGHRILDGQRSTEEFHNLCLSLARGIDYSLANGEVPARVQDLPLLLKQICQRRNDLFLLGGIMVLMVSVKNACKVGWFTEKDTEELLTLVNEIGSNFCNLGDNNTEPISFHPTISKIMTRFYPRMEMGQILASREVKRLFVAQTDNIETSSCIITPPQVNFLLNGKGVERRTNVFMDSGPQIPTNVTPMLKYGTNLLQAVGQFNGHYILAIAFMAVISSPDNPVLQDYVQPAVSMLHSDNEIVEGPSRISLNCPISRTRIKVPVKGHSCKHLQCFDFGNFVEINSRRPSWRCPHCNQYVCYTDIRIDQNMVKVLKEVGENVADVIISADGSWKAILESNDHVDQPRVGTLNSQQKGPDLQGSTSFSNASPNVWDLTEGDDEMNAFDACEIEDRKPFQSNIQGHSITTKQTMAPELNNATEVNQNAVSRVQDGFCSGILLSTYGSSTHSARSDAQFIGGTSQPSPANFLLPPVLTDAISPALNRGTEDIRGNTHLTTSTLHDQLPIPDSLQLQQAQFGHSIVSNEYGRFPTIPRHITRTPIAVQALPAQTQTSGPHHRSRTTLISMVPNGPNTVGSDMERPQQFSRSIFNPVQISDISASALQHHSMSQNWNQQVAGHPTTSQRPGPGAYRTSSGLPTEPQTLQQQQSPQARTHSNLLRSSAHHHSRSQVQQGGAQGRATHAVGTGISQNAQPMVAAQRAAQMTRMPLPVQNQTSRTGSAFPVNANGGRSTAGEQRGNIEGMVQAVSRPESLVDLASEQNWRPTGLMRGSLVGRAYNSALNQLVIQPTQPTQSTRPPTPITSPPPGFPPHLQALLTNIRTPLVPQAPNYPMTQPASTTGGSGILPERSLGLH
SIO_010081: LOC100243215
subclass of: SO_0000673
so part of: LOC100243215
location: complement(join(557577..558308,558627..559514,559588..559704,560412..560463,562435..562486,562665..562766,562860..562944,563066..563114,563201..563268,563693..563744,563865..563947,564100..564165,567267..567332,568787..568859,570237..570448))
location: region:557577-570448:-1
so has part: feature:570237-570448:-1:exon
so has part: feature:568787-568859:-1:exon
so has part: feature:567267-567332:-1:exon
so has part: feature:564100-564165:-1:exon
so has part: feature:563865-563947:-1:exon
so has part: feature:563693-563744:-1:exon
so has part: feature:563201-563268:-1:exon
so has part: feature:563066-563114:-1:exon
so has part: feature:562860-562944:-1:exon
so has part: feature:562665-562766:-1:exon
so has part: feature:562435-562486:-1:exon
so has part: feature:560412-560463:-1:exon
so has part: feature:559588-559704:-1:exon
so has part: feature:558627-559514:-1:exon
so has part: feature:557577-558308:-1:exon

XP_019071879.1
type: Protein
SIO_000068: ncbiprotein

position:557577:-1
position: 557577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:570448:-1
position: 570448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:570237-570448:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:568787-568859:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:567267-567332:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:564100-564165:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:563865-563947:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:563693-563744:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:563201-563268:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:563066-563114:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:562860-562944:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:562665-562766:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:562435-562486:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:560412-560463:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:559588-559704:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:558627-559514:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:557577-558308:-1:exon

LOC100243215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100243215
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E4 SUMO-protein ligase PIAL1 isoform X1
translation: MTGATISLPTSVSNIAGVETTSTSYSASLANSFRLNAVLERLAMHVRSGHRILDGQRSTEEFHNLCLSLARGIDYSLANGEVPARVQDLPLLLKQICQRRNDLFLLGGIMVLMVSVKNACKVGWFTEKDTEELLTLVNEIGSNFCNLGDNNTEPISFHPTISKIMTRFYPRMEMGQILASREVKPGYGTFLVDFHISKSTKFSSQEKIRLFVAQTDNIETSSCIITPPQVNFLLNGKGVERRTNVFMDSGPQIPTNVTPMLKYGTNLLQAVGQFNGHYILAIAFMAVISSPDNPVLQDYVQPAVSMLHSDNEIVEGPSRISLNCPISRTRIKVPVKGHSCKHLQCFDFGNFVEINSRRPSWRCPHCNQYVCYTDIRIDQNMVKVLKEVGENVADVIISADGSWKAILESNDHVDQPRVGTLNSQQKGPDLQGSTSFSNASPNVWDLTEGDDEMNAFDACEIEDRKPFQSNIQGHSITTKQTMAPELNNATEVNQNAVSRVQDGFCSGILLSTYGSSTHSARSDAQFIGGTSQPSPANFLLPPVLTDAISPALNRGTEDIRGNTHLTTSTLHDQLPIPDSLQLQQAQFGHSIVSNEYGRFPTIPRHITRTPIAVQALPAQTQTSGPHHRSRTTLISMVPNGPNTVGSDMERPQQFSRSIFNPVQISDISASALQHHSMSQNWNQQVAGHPTTSQRPGPGAYRTSSGLPTEPQTLQQQQSPQARTHSNLLRSSAHHHSRSQVQQGGAQGRATHAVGTGISQNAQPMVAAQRAAQMTRMPLPVQNQTSRTGSAFPVNANGGRSTAGEQRGNIEGMVQAVSRPESLVDLASEQNWRPTGLMRGSLVGRAYNSALNQLVIQPTQPTQSTRPPTPITSPPPGFPPHLQALLTNIRTPLVPQAPNYPMTQPASTTGGSGILPERSLGLH
SIO_010081: LOC100243215
subclass of: SO_0000673
so part of: LOC100243215
location: complement(join(557577..558308,558627..559514,559588..559704,560412..560463,562435..562486,562665..562766,562860..562944,563066..563114,563201..563268,563525..563596,563693..563744,563865..563947,564100..564165,567267..567332,568787..568859,570237..570448))
location: region:557577-570448:-1
so has part: feature:570237-570448:-1:exon
so has part: feature:568787-568859:-1:exon
so has part: feature:567267-567332:-1:exon
so has part: feature:564100-564165:-1:exon
so has part: feature:563865-563947:-1:exon
so has part: feature:563693-563744:-1:exon
so has part: feature:563525-563596:-1:exon
so has part: feature:563201-563268:-1:exon
so has part: feature:563066-563114:-1:exon
so has part: feature:562860-562944:-1:exon
so has part: feature:562665-562766:-1:exon
so has part: feature:562435-562486:-1:exon
so has part: feature:560412-560463:-1:exon
so has part: feature:559588-559704:-1:exon
so has part: feature:558627-559514:-1:exon
so has part: feature:557577-558308:-1:exon

XP_010658435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:570237-570448:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:568787-568859:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:567267-567332:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:564100-564165:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:563865-563947:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:563693-563744:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:563525-563596:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:563201-563268:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:563066-563114:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:562860-562944:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:562665-562766:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:562435-562486:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:560412-560463:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:559588-559704:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:558627-559514:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:557577-558308:-1:exon

LOC100256994
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100256994
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(571694..578926)
location: region:571694-578926:-1
so has part: feature:571694-578926:-1:exon
subclass of: SO_0000010

100256994
type: Gene
SIO_000068: ncbigene

position:571694:-1
position: 571694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578926:-1
position: 578926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:571694-578926:-1:exon

LOC100256994
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100256994
product: serine/threonine-protein phosphatase PP1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 249 samples with support for all annotated introns
transcript id: XM_002277780.3
SIO_010081: LOC100256994
subclass of: SO_0000673
so part of: LOC100256994
location: complement(join(571694..572072,572711..572920,574130..574689,578384..578926))
location: region:571694-578926:-1
so has part: feature:578384-578926:-1:exon
so has part: feature:574130-574689:-1:exon
so has part: feature:572711-572920:-1:exon
so has part: feature:571694-572072:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:578384-578926:-1:exon

position:578384:-1
position: 578384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:574130-574689:-1:exon

position:574130:-1
position: 574130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574689:-1
position: 574689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:572711-572920:-1:exon

position:572711:-1
position: 572711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572920:-1
position: 572920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:571694-572072:-1:exon

position:572072:-1
position: 572072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100256994
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100256994
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase PP1
translation: MDGELLDDIIRRLVDAKNGRTPRQVQLTEAEIRMLCVTSKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKIKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKTFTDCFNCLPVAALIDEKIICMHGGLSPELKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVTEFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTIFSAPNYCGEFDNAGAMMIVDDTLTCSFQILKSTDKKGKLGFGNMLRPGTPPHKGKG
SIO_010081: LOC100256994
subclass of: SO_0000673
so part of: LOC100256994
location: complement(join(572061..572072,572711..572920,574130..574689,578384..578561))
location: region:572061-578561:-1
so has part: feature:578384-578561:-1:exon
so has part: feature:574130-574689:-1:exon
so has part: feature:572711-572920:-1:exon
so has part: feature:572061-572072:-1:exon

XP_002277816.1
type: Protein
SIO_000068: ncbiprotein

position:572061:-1
position: 572061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578561:-1
position: 578561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578384-578561:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:574130-574689:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:572711-572920:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:572061-572072:-1:exon

LOC100248343
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100248343
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 584823..595660
location: region:584823-595660:1
so has part: feature:584823-595660:1:exon
subclass of: SO_0000010

100248343
type: Gene
SIO_000068: ncbigene

position:584823:1
position: 584823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595660:1
position: 595660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584823-595660:1:exon

LOC100248343
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100248343
product: uncharacterized LOC100248343
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 165 samples with support for all annotated introns
transcript id: XM_010660138.2
SIO_010081: LOC100248343
subclass of: SO_0000673
so part of: LOC100248343
location: join(584823..585335,586591..586926,592340..592495,593086..593426,593877..594390,594530..594562,594857..595660)
location: region:584823-595660:1
so has part: feature:584823-585335:1:exon
so has part: feature:586591-586926:1:exon
so has part: feature:592340-592495:1:exon
so has part: feature:593086-593426:1:exon
so has part: feature:593877-594390:1:exon
so has part: feature:594530-594562:1:exon
so has part: feature:594857-595660:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:584823-585335:1:exon

position:585335:1
position: 585335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:586591-586926:1:exon

position:586591:1
position: 586591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586926:1
position: 586926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:592340-592495:1:exon

position:592340:1
position: 592340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592495:1
position: 592495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:593086-593426:1:exon

position:593086:1
position: 593086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:593426:1
position: 593426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:593877-594390:1:exon

position:593877:1
position: 593877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594390:1
position: 594390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:594530-594562:1:exon

position:594530:1
position: 594530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594562:1
position: 594562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:594857-595660:1:exon

position:594857:1
position: 594857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100248343
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100248343
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100248343
translation: MDAVELPLPAPVAVPKLMGSEGFGRVGVSVKGVEARENDRVSILVGPSIERCSSLVGHKDATIAVNTSESVSWDKIPHIEICRRASQMACLQGEDAPEHLSSEGTNSSSLLIPGPEGSQLLRKAGKTPRSSGLPSGCFKRPRTAQTEDSTRLSGADDMKGISSYPTKGTFPEKSQVVRQKNNFNGKRGEKRNFKVPTRTKYDSFSLKAGLTSFSSAGGGNSILGIYGLKSDIHDVTKLVDEISVNRLLDGTYKCPSLGKDKGKKAVSTNENILHSVRKACSLLQLRRPVQSQQFSETDCSSNRKLSTCSSNSFSCVASNINGDKGDAYRMDLSSCYKDSCSKPETPFNMLDFSLHQPKDILERLALPPPKDLESLLLDAVKPAGSSKSTPDQRLGKPISHRANLPPFPWAHTFSGHCKTNSDAVKLSTSRSTCQGRWQRIGSTAGSLGDVTDCFKDLESFTYDQSLVPSQGLKLGVLENEVGTSASFPLHDWCPSSSTTCSKASHLPPESAGSLKNEGDGGHSPRLIEAAQTLFSLAAHSLRQHPNGIMKWPKKSLQKPMKARKTKSNERPEHISATKSVVVSDYASKNTEQITPSKKPKLCATEKKKDFGHSSARKGLINWSTTPRSIRSSPSKSVRDPTGDSNHHNASITKQSCMLPPPTRILDKAGNSQQKPKRPGPVEWSRAGDKLD
SIO_010081: LOC100248343
subclass of: SO_0000673
so part of: LOC100248343
location: join(585158..585335,586591..586926,592340..592495,593086..593426,593877..594390,594530..594562,594857..595374)
location: region:585158-595374:1
so has part: feature:585158-585335:1:exon
so has part: feature:586591-586926:1:exon
so has part: feature:592340-592495:1:exon
so has part: feature:593086-593426:1:exon
so has part: feature:593877-594390:1:exon
so has part: feature:594530-594562:1:exon
so has part: feature:594857-595374:1:exon

XP_010658440.1
type: Protein
SIO_000068: ncbiprotein

position:585158:1
position: 585158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595374:1
position: 595374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:585158-585335:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:586591-586926:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:592340-592495:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:593086-593426:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:593877-594390:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:594530-594562:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:594857-595374:1:exon

TRNAA-AGC
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: TRNAA-AGC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 596158..596230
location: region:596158-596230:1
so has part: feature:596158-596230:1:exon
subclass of: SO_0000663

109121896
type: Gene
SIO_000068: ncbigene

position:596158:1
position: 596158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596230:1
position: 596230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596158-596230:1:exon

TRNAA-AGC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 29760
gene: TRNAA-AGC
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA alanine (anticodon AGC); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:596191..596193,aa:Ala,seq:agc)
SIO_010081: TRNAA-AGC
subclass of: SO_0000673
so part of: TRNAA-AGC
location: 596158..596230
location: region:596158-596230:1
so has part: feature:596158-596230:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:596158-596230:1:exon

LOC100253460
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100253460
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(596396..598047)
location: region:596396-598047:-1
so has part: feature:596396-598047:-1:exon
subclass of: SO_0000010

100253460
type: Gene
SIO_000068: ncbigene

position:596396:-1
position: 596396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598047:-1
position: 598047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596396-598047:-1:exon

LOC100253460
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100253460
product: protein LURP-one-related 17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 127 samples with support for all annotated introns
transcript id: XM_002272723.3
SIO_010081: LOC100253460
subclass of: SO_0000673
so part of: LOC100253460
location: complement(join(596396..596916,597465..598047))
location: region:596396-598047:-1
so has part: feature:597465-598047:-1:exon
so has part: feature:596396-596916:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:597465-598047:-1:exon

position:597465:-1
position: 597465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:596396-596916:-1:exon

position:596916:-1
position: 596916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100253460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100253460
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein LURP-one-related 17
translation: MVFLKSRSVTVHEDHQPEEEYIAAAASTTTGGDCRSLTVWRKSLLFSCTGFTVIDSYGDLVYRVDNYIGQRPGEVTLMDASGKSVLTVRRRKNLRLVENWHVYEGEVGDTSRTKRPSSSKQPICSVKKHINILHANHNVLAYVFLGNSDKRYAYRIEGSYANRSCKVLDKSRRVVAEIKRKEAMNEGVSFGVEVFLLIVCPGFDSGFAMALVLLLDQMFS
SIO_010081: LOC100253460
subclass of: SO_0000673
so part of: LOC100253460
location: complement(join(596530..596916,597465..597740))
location: region:596530-597740:-1
so has part: feature:597465-597740:-1:exon
so has part: feature:596530-596916:-1:exon

XP_002272759.1
type: Protein
SIO_000068: ncbiprotein

position:596530:-1
position: 596530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597740:-1
position: 597740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597465-597740:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:596530-596916:-1:exon

LOC100262101
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100262101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 621435..631805
location: region:621435-631805:1
so has part: feature:621435-631805:1:exon
subclass of: SO_0000010

100262101
type: Gene
SIO_000068: ncbigene

position:621435:1
position: 621435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631805:1
position: 631805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621435-631805:1:exon

LOC100262101
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100262101
product: respiratory burst oxidase homolog protein A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 112 samples with support for all annotated introns
transcript id: XM_002277493.4
SIO_010081: LOC100262101
subclass of: SO_0000673
so part of: LOC100262101
location: join(621435..622486,622626..622785,622953..623001,623417..623530,625636..626058,628125..628508,628642..628737,629086..629201,629425..629592,629698..629854,630071..630268,630349..630477,630995..631073,631159..631805)
location: region:621435-631805:1
so has part: feature:621435-622486:1:exon
so has part: feature:622626-622785:1:exon
so has part: feature:622953-623001:1:exon
so has part: feature:623417-623530:1:exon
so has part: feature:625636-626058:1:exon
so has part: feature:628125-628508:1:exon
so has part: feature:628642-628737:1:exon
so has part: feature:629086-629201:1:exon
so has part: feature:629425-629592:1:exon
so has part: feature:629698-629854:1:exon
so has part: feature:630071-630268:1:exon
so has part: feature:630349-630477:1:exon
so has part: feature:630995-631073:1:exon
so has part: feature:631159-631805:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:621435-622486:1:exon

position:622486:1
position: 622486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:622626-622785:1:exon

position:622626:1
position: 622626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622785:1
position: 622785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:622953-623001:1:exon

position:622953:1
position: 622953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623001:1
position: 623001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:623417-623530:1:exon

position:623417:1
position: 623417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623530:1
position: 623530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:625636-626058:1:exon

position:625636:1
position: 625636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:626058:1
position: 626058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:628125-628508:1:exon

position:628125:1
position: 628125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:628508:1
position: 628508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:628642-628737:1:exon

position:628642:1
position: 628642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:628737:1
position: 628737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:629086-629201:1:exon

position:629086:1
position: 629086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:629201:1
position: 629201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:629425-629592:1:exon

position:629425:1
position: 629425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:629592:1
position: 629592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:629698-629854:1:exon

position:629698:1
position: 629698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:629854:1
position: 629854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:630071-630268:1:exon

position:630071:1
position: 630071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:630268:1
position: 630268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:630349-630477:1:exon

position:630349:1
position: 630349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:630477:1
position: 630477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:630995-631073:1:exon

position:630995:1
position: 630995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631073:1
position: 631073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:631159-631805:1:exon

position:631159:1
position: 631159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100262101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100262101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: respiratory burst oxidase homolog protein A
translation: MRGLPKHERRWASDTVPGKAMSAGSSPATESGSAEEFVEVTLDLQDDDTIVLRSVEPATVINVDQEGSATPASASGSRSPTSIRRSSSSRLRQFSQELKAEAVAKAKQFSQELKAELKRFSWSHGHGSRAMSSAVASVHSAGGPGSGFDTALAARALRRQRAQLDRTRSGAQKALRGLRFISAKTNSVDAWNEVQSNFDKLAKDGFLNRSDFAQCIGMKDSKEFALELFDALSRRRRLKMDKITRDELYEFWSQIADQSFDSRLQIFFDMVDKNEDGRIAEEEVKEIIMLSASANKLSRLKEQAEEYAALIMEELDPERLGYIELWQLETLLLQKDTYLNYSQALSYTSQALSQNLAGLRKRSSIQRMSTKLLYYLQENWRRIWVICLWVLIMAGLFMWKFFEYRQTKAFHVMGYCLLTAKGAAETLKFNMALILLPVCRNTITWLRSTKLGLFVPFDDNINFHKTIAGAIVVGVILHAGNHLACDFPRLEKATQINYNDYLIEFGSDKPTYADLVRGKEGVTGILMVLLMLIAFTLATRWFRRSLVKLPKPFDRITGFNAFWYSHHLFVIVYILLIIHGTYLYLVHKWYLKTTWMYLAVPVCLYAGERTLRLFRSGFYAVRLLKVAIYPGNVLTLQMSKPPQFRYKSGQYMFVQCPAVSPFEWHPFSITSAPGDDFLSIHIRQLGDWTQELKRVFSEACEAPIAGKSGLLRADESTKKSLPKLLIDGPYGAPAQDYKKYDVLLLVGLGIGATPFISILKDLLNNIVKMEEQDSVSDFSRISDQSAGTTDSPSLNRISPKRRKTLKTTNAYFYWVTREQGSFDWFKGVMNEVAELDQRGVIEMHNYLTSVYEEGDARSALITMVQALNHAKNGVDIVSGTRVRTHFARPNWKKVFSKTATKHANARIGVFYCGAPVLAKELSRLCYEFNQKGSTKFEFHKEHF
SIO_010081: LOC100262101
subclass of: SO_0000673
so part of: LOC100262101
location: join(621838..622486,622626..622785,622953..623001,623417..623530,625636..626058,628125..628508,628642..628737,629086..629201,629425..629592,629698..629854,630071..630268,630349..630477,630995..631073,631159..631268)
location: region:621838-631268:1
so has part: feature:621838-622486:1:exon
so has part: feature:622626-622785:1:exon
so has part: feature:622953-623001:1:exon
so has part: feature:623417-623530:1:exon
so has part: feature:625636-626058:1:exon
so has part: feature:628125-628508:1:exon
so has part: feature:628642-628737:1:exon
so has part: feature:629086-629201:1:exon
so has part: feature:629425-629592:1:exon
so has part: feature:629698-629854:1:exon
so has part: feature:630071-630268:1:exon
so has part: feature:630349-630477:1:exon
so has part: feature:630995-631073:1:exon
so has part: feature:631159-631268:1:exon

XP_002277529.1
type: Protein
SIO_000068: ncbiprotein

position:621838:1
position: 621838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631268:1
position: 631268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621838-622486:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622626-622785:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622953-623001:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:623417-623530:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:625636-626058:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:628125-628508:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:628642-628737:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:629086-629201:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:629425-629592:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:629698-629854:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:630071-630268:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:630349-630477:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:630995-631073:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:631159-631268:1:exon

LOC104881120
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC104881120
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 634453..635325
location: region:634453-635325:1
so has part: feature:634453-635325:1:exon
subclass of: SO_0000010

104881120
type: Gene
SIO_000068: ncbigene

position:634453:1
position: 634453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635325:1
position: 635325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:634453-635325:1:exon

LOC104881120
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104881120
product: late embryogenesis abundant protein At1g64065-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010660169.2
SIO_010081: LOC104881120
subclass of: SO_0000673
so part of: LOC104881120
location: 634453..635325
location: region:634453-635325:1
so has part: feature:634453-635325:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:634453-635325:1:exon

LOC104881120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104881120
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: late embryogenesis abundant protein At1g64065-like
translation: MKKEGGKNTKCIAYVVAFIVFQTIIILVFAPTLLKIKSPKLRFGKVDVESFSNSTSSFTMKLQAQVAVKNTNFGHFKYSNNTIPITYGGVTVGEVVVPKGRARARSTNRFMVAVELSYDQLSSNSTLGNDINSGLLPLVSRAKLPGKIHLMKVMKKKKTAEMYCTIKVNLMNRVVQDLKCK
SIO_010081: LOC104881120
subclass of: SO_0000673
so part of: LOC104881120
location: 634573..635118
location: region:634573-635118:1
so has part: feature:634573-635118:1:exon

XP_010658471.1
type: Protein
SIO_000068: ncbiprotein

position:634573:1
position: 634573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635118:1
position: 635118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:634573-635118:1:exon

LOC104881121
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC104881121
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 638219..638845
location: region:638219-638845:1
so has part: feature:638219-638845:1:exon
subclass of: SO_0000010

104881121
type: Gene
SIO_000068: ncbigene

position:638219:1
position: 638219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638845:1
position: 638845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:638219-638845:1:exon

LOC104881121
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC104881121
product: late embryogenesis abundant protein At1g64065-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_010660173.2
SIO_010081: LOC104881121
subclass of: SO_0000673
so part of: LOC104881121
location: 638219..638845
location: region:638219-638845:1
so has part: feature:638219-638845:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:638219-638845:1:exon

LOC104881121
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC104881121
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: late embryogenesis abundant protein At1g64065-like
translation: MAEKSLQVYPLAPANGNPRSDEESAYLHSKELKKKKRLKCFAYIVLFAVFQTLVILTFALIVMKIKTPKVRFGTETVQASNLVIGTAASGFNMSLAAKLTVENTNFGHYKFDQTTGTITYEGVKVGEFMIPKARARARSTKKIDIVADVNSNTLNSDHGTGFLTLNSQAKLTGKVILMKVMKKKRSAEMSCSLVIDVNRKVVSSVMCK
SIO_010081: LOC104881121
subclass of: SO_0000673
so part of: LOC104881121
location: 638219..638845
location: region:638219-638845:1
so has part: feature:638219-638845:1:exon

XP_010658475.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:638219-638845:1:exon

LOC100241699
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100241699
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 641056..642014
location: region:641056-642014:1
so has part: feature:641056-642014:1:exon
subclass of: SO_0000010

100241699
type: Gene
SIO_000068: ncbigene

position:641056:1
position: 641056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:642014:1
position: 642014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641056-642014:1:exon

LOC100241699
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100241699
product: late embryogenesis abundant protein At1g64065-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_002272606.3
SIO_010081: LOC100241699
subclass of: SO_0000673
so part of: LOC100241699
location: 641056..642014
location: region:641056-642014:1
so has part: feature:641056-642014:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:641056-642014:1:exon

LOC100241699
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100241699
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: late embryogenesis abundant protein At1g64065-like
translation: MPEDNQFQPLAPARLHGKSDEEFGVFKPRASKPPRRSSKCPVYVLAGLVTLAAIALVFALAVLRVEAPDVELKSVAVKNLTHGTSPSPSFNVTLTAEVSVQNKNFGAFNFENGTATVLYEGMVVGDEEFSKAHVESRKTKRMNVTLDVRSDRLWNDKNLSSDISSGSVNLTTYAQVTGKVRVMKVVRRRTTARMNCSMTLNLTSSSIQDLVCR
SIO_010081: LOC100241699
subclass of: SO_0000673
so part of: LOC100241699
location: 641176..641817
location: region:641176-641817:1
so has part: feature:641176-641817:1:exon

XP_002272642.1
type: Protein
SIO_000068: ncbiprotein

position:641176:1
position: 641176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641817:1
position: 641817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641176-641817:1:exon

LOC100246818
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100246818
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 647468..650423
location: region:647468-650423:1
so has part: feature:647468-650423:1:exon
subclass of: SO_0000010

100246818
type: Gene
SIO_000068: ncbigene

position:647468:1
position: 647468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650423:1
position: 650423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:647468-650423:1:exon

LOC100246818
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100246818
product: late embryogenesis abundant protein At1g64065-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010660184.2
SIO_010081: LOC100246818
subclass of: SO_0000673
so part of: LOC100246818
location: join(647468..648052,648785..649016,650207..650423)
location: region:647468-650423:1
so has part: feature:647468-648052:1:exon
so has part: feature:648785-649016:1:exon
so has part: feature:650207-650423:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:647468-648052:1:exon

position:648052:1
position: 648052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:648785-649016:1:exon

position:648785:1
position: 648785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649016:1
position: 649016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:650207-650423:1:exon

position:650207:1
position: 650207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100246818
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100246818
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: late embryogenesis abundant protein At1g64065-like
translation: MAEKDQSKPLAPAGYNLRSDEEEAMSRELKKLPPRKYIKCCGCITALILIQAVILLVLAFTIFRVKDPVIKMNGMRIGPLELEDSTNLTLVADVSVKNPNVASFIFSNATTSITYNGTVIGQARTPPGKAKARRTLRMNVTVEIIPEKIMAKIMAVTTLLSSRAINISSYTRISGRVKIIKIIKKNVVVKLNCTMMVNLTSREIQGQSCKRHLWI
SIO_010081: LOC100246818
subclass of: SO_0000673
so part of: LOC100246818
location: join(647600..648052,648785..648979)
location: region:647600-648979:1
so has part: feature:647600-648052:1:exon
so has part: feature:648785-648979:1:exon

XP_010658486.1
type: Protein
SIO_000068: ncbiprotein

position:647600:1
position: 647600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648979:1
position: 648979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:647600-648052:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:648785-648979:1:exon

LOC100251951
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100251951
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 659465..661544
location: region:659465-661544:1
so has part: feature:659465-661544:1:exon
subclass of: SO_0000010

100251951
type: Gene
SIO_000068: ncbigene

position:659465:1
position: 659465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:661544:1
position: 661544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:659465-661544:1:exon

LOC100251951
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100251951
product: probable membrane-associated kinase regulator 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 191 samples with support for all annotated introns
transcript id: XM_010660192.2
SIO_010081: LOC100251951
subclass of: SO_0000673
so part of: LOC100251951
location: join(659465..661075,661172..661544)
location: region:659465-661544:1
so has part: feature:659465-661075:1:exon
so has part: feature:661172-661544:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:659465-661075:1:exon

position:661075:1
position: 661075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:661172-661544:1:exon

position:661172:1
position: 661172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100251951
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100251951
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable membrane-associated kinase regulator 2
translation: MEAFSLLKYWRGGGGGGGGGGVADAVSVRASGANVRAGAAGTTTIVTAVSNQVVETDDEEDDDGPFFDLEFAVPDEEEEGEGEGEGEEGVEKSRGNVEEGEEEEDDDVESTGTEGEREFKFTLSSSGSSGDRTDPNLSLSPSDDLFFKGRLVPIEPSSLVFNSSEPNSKGNQFPVSLLKSATKFRVFMLGLKKSKSSTVEKTESNGSASATPKQDKQESQGQPQPQPQSQSQPQQQKQQESKFFTVKFKVEEVPIMSLFTRDNSSRSSTGTTKAQKQNSDETASDEKRFSKDVMQKYLKMVKPLYVRVSRRYGEKLRFSGQLSLGSGAKPGPATAPAANQKTSPTKSKTEPDQDVTETPAINAKSQKQGNIPAGLRVVCKHLGKSRSASSAVAAVPSAPCQSRRRDDSLLQQQDGIQSAILHCKRSFNASRDLDSSLLSRSVSDPSHEKSLDISRNSSEQLKDVSL
SIO_010081: LOC100251951
subclass of: SO_0000673
so part of: LOC100251951
location: join(659782..661075,661172..661278)
location: region:659782-661278:1
so has part: feature:659782-661075:1:exon
so has part: feature:661172-661278:1:exon

XP_010658494.1
type: Protein
SIO_000068: ncbiprotein

position:659782:1
position: 659782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:661278:1
position: 661278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:659782-661075:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:661172-661278:1:exon

LOC100257079
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100257079
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(661390..664720)
location: region:661390-664720:-1
so has part: feature:661390-664720:-1:exon
subclass of: SO_0000010

100257079
type: Gene
SIO_000068: ncbigene

position:661390:-1
position: 661390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664720:-1
position: 664720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:661390-664720:-1:exon

LOC100257079
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100257079
product: endoglucanase B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_002272498.3
SIO_010081: LOC100257079
subclass of: SO_0000673
so part of: LOC100257079
location: complement(join(661390..662518,662602..663202,664095..664720))
location: region:661390-664720:-1
so has part: feature:664095-664720:-1:exon
so has part: feature:662602-663202:-1:exon
so has part: feature:661390-662518:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:664095-664720:-1:exon

position:664095:-1
position: 664095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:662602-663202:-1:exon

position:662602:-1
position: 662602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663202:-1
position: 663202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:661390-662518:-1:exon

position:662518:-1
position: 662518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100257079
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100257079
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100257079
translation: MKEKRSIATILFISLLLFASDSHSLPLSTRGRWVVDDASGQRVKLACVNWISHLQAMVVEGLHKRPLREIAGGITAMGFNCVRLTWATYMFTRPSYGNRSVAESLGELGLSEAKEGVARNNPELLNLSLVEAYEAVVDELGRHGVMVVLDNHVSKPKWCCAEDDGNGFFGDKYFHPKEWLQGLTKVAHRFKDKSQVVAMSMRNELRGPNQTEHIWYKQIRKGGRTIHSINPNLLVIVSGLEFDTDLSFLKQKPLKLKLPNKVVFEAHWYSFSSITGGVEWTEQPLNQICHNRTEWFESGAAFVGTGSNPAPFFLSEFGIDLRGVNPRDNRFFGCFLAFVAQRDLDWALWTLQGSYYYRDGVVGQEETYGVLDYNWDKPRNPKFLKRIRILQDILQDPNSNVPKYHLIFHPRSGRCVSVKGEGQDQIHGRNCKKGSRWSHDGNGGAIRLMGSGLCLKAVGDGLPAKLSTDCSSPQARWKLISKSKLHIAAMDEQGKPLCLDGKNSNSSSILTRTCICALQDGDGSDLDCLTNPQRQWFKFVPSNLP
SIO_010081: LOC100257079
subclass of: SO_0000673
so part of: LOC100257079
location: complement(join(662067..662518,662602..663202,664095..664679))
location: region:662067-664679:-1
so has part: feature:664095-664679:-1:exon
so has part: feature:662602-663202:-1:exon
so has part: feature:662067-662518:-1:exon

XP_002272534.1
type: Protein
SIO_000068: ncbiprotein

position:662067:-1
position: 662067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664679:-1
position: 664679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664095-664679:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:662602-663202:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:662067-662518:-1:exon

LOC100262188
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100262188
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(666543..669067)
location: region:666543-669067:-1
so has part: feature:666543-669067:-1:exon
subclass of: SO_0000010

100262188
type: Gene
SIO_000068: ncbigene

position:666543:-1
position: 666543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:669067:-1
position: 669067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:666543-669067:-1:exon

LOC100262188
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100262188
product: endoglucanase/exoglucanase B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_002272455.2
SIO_010081: LOC100262188
subclass of: SO_0000673
so part of: LOC100262188
location: complement(join(666543..667104,667304..667895,668432..669067))
location: region:666543-669067:-1
so has part: feature:668432-669067:-1:exon
so has part: feature:667304-667895:-1:exon
so has part: feature:666543-667104:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:668432-669067:-1:exon

position:668432:-1
position: 668432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:667304-667895:-1:exon

position:667304:-1
position: 667304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667895:-1
position: 667895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:666543-667104:-1:exon

position:667104:-1
position: 667104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100262188
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100262188
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100262188
translation: MEMIRGTTLKTFLLISLSVVATLSVCESLPLSTKGRWIVDDVTGRRVKLKCVNWISHTESMITEGLHSQPIGDIADKISEMGFNCVRLTYPTFLWTRVDYYNKTVAESLDSLNATEAKAMIAVQNPRFLSLPLRESYERVVGELGRRGLMLILDNHVSKPMWCCEREDGNGFFGDKFFDPEEWIEGLSQVANRFKDESHVIGMSMRNELRGQRSNQKDWYKYMREGAKAIHSINPNLLVVVSGLNFDNDLSFLKKKPFRLTLNNKVVFEAHWYSFDATEQWNDKPPEQECKDRAREFYRDAGFLTEGDNPAPLFISEFGMDLRMGNVVDNRYFNCYLPTVAAKDLDWALWTLQASYYYRQGSLFLEEVYSVLDFNWEKPRNPQFLEKLTILQEMLQDPNSEASPYYVIVHAKSGLCVNVDGEKKVHGSGCRHRTKWTHSGDGWPIELMGSNLCLKAVGDGRPVKVSTDCRSQQSRWRRVSKEKLHLAVRDEHDHTESLCLDASSSDPSSIVTRKCACKEGDLNCHHEEQSNWFQLVPSNIP
SIO_010081: LOC100262188
subclass of: SO_0000673
so part of: LOC100262188
location: complement(join(666668..667104,667304..667895,668432..669028))
location: region:666668-669028:-1
so has part: feature:668432-669028:-1:exon
so has part: feature:667304-667895:-1:exon
so has part: feature:666668-667104:-1:exon

XP_002272491.1
type: Protein
SIO_000068: ncbiprotein

position:666668:-1
position: 666668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:669028:-1
position: 669028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:668432-669028:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:667304-667895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:666668-667104:-1:exon

LOC100267356
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100267356
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(670246..672781)
location: region:670246-672781:-1
so has part: feature:670246-672781:-1:exon
subclass of: SO_0000010

100267356
type: Gene
SIO_000068: ncbigene

position:670246:-1
position: 670246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:672781:-1
position: 672781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:670246-672781:-1:exon

LOC100267356
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100267356
product: uncharacterized LOC100267356, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_019225937.1
SIO_010081: LOC100267356
subclass of: SO_0000673
so part of: LOC100267356
location: complement(join(670246..670802,671310..671901,671973..672781))
location: region:670246-672781:-1
so has part: feature:671973-672781:-1:exon
so has part: feature:671310-671901:-1:exon
so has part: feature:670246-670802:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:671973-672781:-1:exon

position:671973:-1
position: 671973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:671310-671901:-1:exon

position:671310:-1
position: 671310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:671901:-1
position: 671901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:670246-670802:-1:exon

position:670802:-1
position: 670802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100267356
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100267356
product: uncharacterized LOC100267356, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_002272418.3
SIO_010081: LOC100267356
subclass of: SO_0000673
so part of: LOC100267356
location: complement(join(670257..670802,671310..671901,671976..672779))
location: region:670257-672779:-1
so has part: feature:671976-672779:-1:exon
so has part: feature:671310-671901:-1:exon
so has part: feature:670257-670802:-1:exon

position:670257:-1
position: 670257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:672779:-1
position: 672779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:671976-672779:-1:exon

position:671976:-1
position: 671976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:671310-671901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:670257-670802:-1:exon

LOC100267356
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100267356
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100267356 isoform X2
translation: MLMTGHLPFGEIAVSQKLKWKSAVNMPALYPNQRRLYRLYLCWPFAKCGRIFKWSKASYKFAEMKGKNNLQTILLISLAMSATLCNSLPLSTRGRWIVDNAAGGRVKMACVNWVSHLEPLVTEGIHAQPVERIAETVKAMGFNCIRLTYATFMWTRADYNNRTVAQSLDSFNLTQAKEGIARNNPKLLNLQIIDAYEAVVNELGAHGLMLVLDNHVSKPLWCCAREDGNGFFGDMYFDPKEWIKGLTDVSTRFKNNPQVVALSMRNEMRGARSNVPDWYRYMRKGAKAIHKANPKVLVIVSGLNFDKDLSFLGRKSFGFTLNNKVVFEAHWYTFDFTQQWQQLPPNRACRQRADEFQRDAAFLTTGDKAAPLFISEYGINLQETSQVDSRYFTCFLPTVAEKDLDWALWTLQASYHYRQGHAGGGESYSVLDYSWSKPRYPQFLERMVILQNLLQDPNSNVSPYYLLVHAQSGFCVNVKHNDVVSVSSCRKNSRNSRWNHEGDRSPIKKLGRKHCLKAVGDGVPLTLSDDCSSPRATWQLVSDSMLQIAAMDEQGNPLCLDATPSSNSTPILTRACACLNNEAGCDPLSQWFKLVPSNIA
SIO_010081: LOC100267356
subclass of: SO_0000673
so part of: LOC100267356
location: complement(join(670366..670802,671310..671901,671976..672749))
location: region:670366-672749:-1
so has part: feature:671976-672749:-1:exon
so has part: feature:671310-671901:-1:exon
so has part: feature:670366-670802:-1:exon

XP_002272454.3
type: Protein
SIO_000068: ncbiprotein

position:670366:-1
position: 670366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:672749:-1
position: 672749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:671976-672749:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671310-671901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:670366-670802:-1:exon

LOC100267356
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100267356
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100267356 isoform X1
translation: MLMTGHLPFGEIAVSQKLKWKSAVNMPALYPNQRRLYRLYLCWPFAKCGRIFKWSKASYKFAEMKGKNNLQTILLISLAMSATLCNSLPLSTRGRWIVDNAAGGRVKMACVNWVSHLEPLVTEGIHAQPVERIAETVKAMGFNCIRLTYATFMWTRADYNNRTVAQSLDSFNLTQAKEGIARNNPKLLNLQIIDAYEAVVNELGAHGLMLVLDNHVSKPLWCCAREDGNGFFGDMYFDPKEWIKGLTDVSTRFKNNPQVVVALSMRNEMRGARSNVPDWYRYMRKGAKAIHKANPKVLVIVSGLNFDKDLSFLGRKSFGFTLNNKVVFEAHWYTFDFTQQWQQLPPNRACRQRADEFQRDAAFLTTGDKAAPLFISEYGINLQETSQVDSRYFTCFLPTVAEKDLDWALWTLQASYHYRQGHAGGGESYSVLDYSWSKPRYPQFLERMVILQNLLQDPNSNVSPYYLLVHAQSGFCVNVKHNDVVSVSSCRKNSRNSRWNHEGDRSPIKKLGRKHCLKAVGDGVPLTLSDDCSSPRATWQLVSDSMLQIAAMDEQGNPLCLDATPSSNSTPILTRACACLNNEAGCDPLSQWFKLVPSNIA
SIO_010081: LOC100267356
subclass of: SO_0000673
so part of: LOC100267356
location: complement(join(670366..670802,671310..671901,671973..672749))
location: region:670366-672749:-1
so has part: feature:671973-672749:-1:exon
so has part: feature:671310-671901:-1:exon
so has part: feature:670366-670802:-1:exon

XP_019081482.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:671973-672749:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671310-671901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:670366-670802:-1:exon

LOC100245045
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100245045
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 673705..680007
location: region:673705-680007:1
so has part: feature:673705-680007:1:exon
subclass of: SO_0000010

100245045
type: Gene
SIO_000068: ncbigene

position:673705:1
position: 673705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:680007:1
position: 680007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:673705-680007:1:exon

LOC100245045
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100245045
product: uncharacterized LOC100245045, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_019226005.1
SIO_010081: LOC100245045
subclass of: SO_0000673
so part of: LOC100245045
location: join(673705..673757,678066..678705,678777..679368,679462..680007)
location: region:673705-680007:1
so has part: feature:673705-673757:1:exon
so has part: feature:678066-678705:1:exon
so has part: feature:678777-679368:1:exon
so has part: feature:679462-680007:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:673705-673757:1:exon

position:673757:1
position: 673757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:678066-678705:1:exon

position:678066:1
position: 678066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678705:1
position: 678705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:678777-679368:1:exon

position:678777:1
position: 678777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:679368:1
position: 679368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:679462-680007:1:exon

position:679462:1
position: 679462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100245045
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100245045
product: uncharacterized LOC100245045, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_002272386.4
SIO_010081: LOC100245045
subclass of: SO_0000673
so part of: LOC100245045
location: join(677914..678705,678777..679368,679462..680007)
location: region:677914-680007:1
so has part: feature:677914-678705:1:exon
so has part: feature:678777-679368:1:exon
so has part: feature:679462-680007:1:exon

position:677914:1
position: 677914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:677914-678705:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:678777-679368:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:679462-680007:1:exon

LOC100245045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100245045
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100245045
translation: MKTLQIILLIFLSLFGAFCYSLPLSTRGRWIVDSETGHRVKLTCLNWVAHTETMVTEGLHTQPIKDIAAKVTSMGFNCIRLTYATFMWTRSDYSNKTVAQSLDSFNLTQAREGIARNNPQLLNLSLQEAYEAVVDELGANGLMLVLDNHVSKPMWCCAREDGNGFFGDMFFDPKEWIEGLTQVAKRFKGKPQVVAMSMRNEIRGPRQNLPDWYKNMREGAKAIHSTNPDVLVLVSGLNFDKDLSFLSTTPFGLTLDKKVVYEAHWYSFDFTQQWQTQPLNRVCRQRADEFQREAAFLITGDNAAPLIISEFGVDLRGVNQADNRYFNCLLPTVAEKDLDWALWTLQASYYYREGKAGPEEVYSVLDYNWDKPRDPKYLERLTILQQTIQDPNSTTLSYYLIVHTESGFCVNVEGEDNVHGSSCRERSKWSHGGDGWPIRLVGGELCLKAVGDGVPVTLSTDCKSPRATWKLVSDSRLHVAAMDEQGNSLCLEATSSNYSSILTRRCACVKNEANCDPQSQWFKLVPSNLS
SIO_010081: LOC100245045
subclass of: SO_0000673
so part of: LOC100245045
location: join(678130..678705,678777..679368,679462..679886)
location: region:678130-679886:1
so has part: feature:678130-678705:1:exon
so has part: feature:678777-679368:1:exon
so has part: feature:679462-679886:1:exon

XP_019081550.1
type: Protein
SIO_000068: ncbiprotein

position:678130:1
position: 678130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:679886:1
position: 679886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:678130-678705:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:678777-679368:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:679462-679886:1:exon

LOC100245045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100245045
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100245045
translation: MKTLQIILLIFLSLFGAFCYSLPLSTRGRWIVDSETGHRVKLTCLNWVAHTETMVTEGLHTQPIKDIAAKVTSMGFNCIRLTYATFMWTRSDYSNKTVAQSLDSFNLTQAREGIARNNPQLLNLSLQEAYEAVVDELGANGLMLVLDNHVSKPMWCCAREDGNGFFGDMFFDPKEWIEGLTQVAKRFKGKPQVVAMSMRNEIRGPRQNLPDWYKNMREGAKAIHSTNPDVLVLVSGLNFDKDLSFLSTTPFGLTLDKKVVYEAHWYSFDFTQQWQTQPLNRVCRQRADEFQREAAFLITGDNAAPLIISEFGVDLRGVNQADNRYFNCLLPTVAEKDLDWALWTLQASYYYREGKAGPEEVYSVLDYNWDKPRDPKYLERLTILQQTIQDPNSTTLSYYLIVHTESGFCVNVEGEDNVHGSSCRERSKWSHGGDGWPIRLVGGELCLKAVGDGVPVTLSTDCKSPRATWKLVSDSRLHVAAMDEQGNSLCLEATSSNYSSILTRRCACVKNEANCDPQSQWFKLVPSNLS
SIO_010081: LOC100245045
subclass of: SO_0000673
so part of: LOC100245045
location: join(678130..678705,678777..679368,679462..679886)
location: region:678130-679886:1
so has part: feature:678130-678705:1:exon
so has part: feature:678777-679368:1:exon
so has part: feature:679462-679886:1:exon

XP_002272422.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:678130-678705:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:678777-679368:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:679462-679886:1:exon

LOC100250178
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100250178
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(681213..683191)
location: region:681213-683191:-1
so has part: feature:681213-683191:-1:exon
subclass of: SO_0000010

100250178
type: Gene
SIO_000068: ncbigene

position:681213:-1
position: 681213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683191:-1
position: 683191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:681213-683191:-1:exon

LOC100250178
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100250178
product: uncharacterized LOC100250178
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_002272350.3
SIO_010081: LOC100250178
subclass of: SO_0000673
so part of: LOC100250178
location: complement(join(681213..681748,681824..682415,682492..683191))
location: region:681213-683191:-1
so has part: feature:682492-683191:-1:exon
so has part: feature:681824-682415:-1:exon
so has part: feature:681213-681748:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:682492-683191:-1:exon

position:682492:-1
position: 682492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:681824-682415:-1:exon

position:681824:-1
position: 681824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682415:-1
position: 682415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:681213-681748:-1:exon

position:681748:-1
position: 681748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100250178
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100250178
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100250178
translation: MFAKMGMKTLHVILLIFLSLFGAFCYSLPLSTRGRWIVDSETGSRVKLTCLNWAAHIDTMVTEGLHTQPIKDIVAKVTLMGFNCIRLTYATFMWTRPDYGNKTVAQSLDSMNLTQAREGIARNNPQLLNLSLQDAYEAVVDAIGANGLMLVLDNHVSKPMWCCASEDGNGFFGDMFFDPKEWIEGLTQVASRFKGKPQVVAMSMRNELRGPRQNLPDWYTNMTEGAKAIHSTNPDVLVLVSGLNFDLDLSFLNTTPFGLTLDNKVVYEAHWYSFDFTQQWQTQPLNRVCGQCADEFQREAAFLITGDNAAPLILSEFGVDVRGVNQDDNRYFNCLLPTVADKDLDWALWTLQGSYYYREGKAGPEEVYSVLDYNWDKPRDPKYLERLTILQQTIQDPNSIALSYYVLVHPESGFCVNVEGQDNVHGSSCRERSKWSHSGDGSPIQLVGSELCLKAVGDGVPVALSTDCKSPWATWKLVSDSMLHIAAMDEQGNSLCLESTSSNYSSILTRSCACLNNETNCDPQSQWFRLVPSNLS
SIO_010081: LOC100250178
subclass of: SO_0000673
so part of: LOC100250178
location: complement(join(681324..681748,681824..682415,682492..683085))
location: region:681324-683085:-1
so has part: feature:682492-683085:-1:exon
so has part: feature:681824-682415:-1:exon
so has part: feature:681324-681748:-1:exon

XP_002272386.2
type: Protein
SIO_000068: ncbiprotein

position:681324:-1
position: 681324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683085:-1
position: 683085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:682492-683085:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:681824-682415:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:681324-681748:-1:exon

LOC100255348
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100255348
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(684959..>688043)
location: region:684959-688043:-1
so has part: feature:684959-688043:-1:exon
subclass of: SO_0000010

100255348
type: Gene
SIO_000068: ncbigene

position:684959:-1
position: 684959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688043:-1
position: 688043
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:684959-688043:-1:exon

LOC100255348
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100255348
product: uncharacterized LOC100255348
inference: similar to RNA sequence (same species):INSD:GAKH01021534.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 1396 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 248 samples with support for all annotated introns
transcript id: XM_002272311.3
SIO_010081: LOC100255348
subclass of: SO_0000673
so part of: LOC100255348
location: complement(join(684959..685575,687272..687401,687606..>688043))
location: region:684959-688043:-1
so has part: feature:687606-688043:-1:exon
so has part: feature:687272-687401:-1:exon
so has part: feature:684959-685575:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:687606-688043:-1:exon

position:687606:-1
position: 687606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:687272-687401:-1:exon

position:687272:-1
position: 687272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687401:-1
position: 687401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:684959-685575:-1:exon

position:685575:-1
position: 685575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100255348
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100255348
inference: similar to RNA sequence (same species):INSD:GAKH01021534.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 351 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100255348
translation: MVFGMNRLHWSPLLSPHPRQHFHLLCLFCLNSMVSYLTIVLCALQSLSMAARNALLKYLRVEARRLPQNPNIPFQLSFNLIRRHFSEEIRGTFLDKSEVTDRVISVVKNFQKVDPSKSFCQMLIHRHRQILTNALHLRHFSQSAAAAVLQDPLEPPPLTYLEGFPRPDPKFAEIIRAIPRTISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVKTNQIRKLVNHLGRSFFLSRLFDLEVGPHFESNEVIEKVRVLPRKLHLHAGTDAVLNVTFIRAPSHALLKVDVPLVFRGEDVSPGLKKGAYLNTIKRTVKYLCPADIIPPYIDVDLSELDAGQKIVMGDLKVHPALKLLRSKDEPVCKIMGTRVSDQRKSK
SIO_010081: LOC100255348
subclass of: SO_0000673
so part of: LOC100255348
location: complement(join(685355..685575,687272..687401,687606..>688043))
location: region:685355-688043:-1
so has part: feature:687606-688043:-1:exon
so has part: feature:687272-687401:-1:exon
so has part: feature:685355-685575:-1:exon

XP_002272347.2
type: Protein
SIO_000068: ncbiprotein

position:685355:-1
position: 685355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:687606-688043:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:687272-687401:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:685355-685575:-1:exon

LOC104881131
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC104881131
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 691292..692794
location: region:691292-692794:1
so has part: feature:691292-692794:1:exon
subclass of: SO_0000011

104881131
type: Gene
SIO_000068: ncbigene

position:691292:1
position: 691292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:692794:1
position: 692794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:691292-692794:1:exon

LOC104881131
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 29760
nc RNA class: lncRNA
gene: LOC104881131
product: uncharacterized LOC104881131
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XR_787153.2
SIO_010081: LOC104881131
subclass of: SO_0000673
so part of: LOC104881131
location: join(691292..691497,692237..692392,692755..692794)
location: region:691292-692794:1
so has part: feature:691292-691497:1:exon
so has part: feature:692237-692392:1:exon
so has part: feature:692755-692794:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:691292-691497:1:exon

position:691497:1
position: 691497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:692237-692392:1:exon

position:692237:1
position: 692237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:692392:1
position: 692392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:692755-692794:1:exon

position:692755:1
position: 692755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100267262
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100267262
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 705775..708409
location: region:705775-708409:1
so has part: feature:705775-708409:1:exon
subclass of: SO_0000010

100267262
type: Gene
SIO_000068: ncbigene

position:705775:1
position: 705775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:708409:1
position: 708409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:705775-708409:1:exon

LOC100267262
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100267262
product: reticulon-like protein B2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 113 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 255 samples with support for all annotated introns
transcript id: XM_010660213.2
SIO_010081: LOC100267262
subclass of: SO_0000673
so part of: LOC100267262
location: join(705775..706217,707029..707209,707288..707429,707777..707846,707948..708409)
location: region:705775-708409:1
so has part: feature:705775-706217:1:exon
so has part: feature:707029-707209:1:exon
so has part: feature:707288-707429:1:exon
so has part: feature:707777-707846:1:exon
so has part: feature:707948-708409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:705775-706217:1:exon

position:706217:1
position: 706217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:707029-707209:1:exon

position:707029:1
position: 707029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:707209:1
position: 707209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:707288-707429:1:exon

position:707288:1
position: 707288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:707429:1
position: 707429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:707777-707846:1:exon

position:707777:1
position: 707777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:707846:1
position: 707846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:707948-708409:1:exon

position:707948:1
position: 707948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100267262
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100267262
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reticulon-like protein B2
translation: MADHEDSTPSPVESMMEKISEKIHGHDSSSSDSDNEKSSPSAFKAKVYRIFGREKPVHKVLGGGKPADVVLWRNKKISAGVLGGATAVWILFELLEYHLLTLVCHCSILALAILFLWSNATTFINKAPPHIPEVHIPEDPVLQFASALRIEINRGFTLLRNVASGKDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVLYEKYEDPVDSFAEKAMVEIKRQYAVFDAKVLSRIPRGPLKDKKIA
SIO_010081: LOC100267262
subclass of: SO_0000673
so part of: LOC100267262
location: join(706022..706217,707029..707209,707288..707429,707777..707846,707948..708117)
location: region:706022-708117:1
so has part: feature:706022-706217:1:exon
so has part: feature:707029-707209:1:exon
so has part: feature:707288-707429:1:exon
so has part: feature:707777-707846:1:exon
so has part: feature:707948-708117:1:exon

XP_010658515.1
type: Protein
SIO_000068: ncbiprotein

position:706022:1
position: 706022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:708117:1
position: 708117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:706022-706217:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:707029-707209:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:707288-707429:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:707777-707846:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:707948-708117:1:exon

LOC100244958
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100244958
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(709307..719836)
location: region:709307-719836:-1
so has part: feature:709307-719836:-1:exon
subclass of: SO_0000010

100244958
type: Gene
SIO_000068: ncbigene

position:709307:-1
position: 709307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719836:-1
position: 719836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:709307-719836:-1:exon

LOC100244958
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100244958
product: calmodulin-interacting protein 111, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_010660224.2
SIO_010081: LOC100244958
subclass of: SO_0000673
so part of: LOC100244958
location: complement(join(709307..709876,709973..710098,710207..710275,710357..710495,710739..711307,712187..712327,712457..712544,712622..713118,713290..713354,714079..714176,714279..714345,715260..715353,715683..715718,715788..715876,715982..716103,718994..719834))
location: region:709307-719834:-1
so has part: feature:718994-719834:-1:exon
so has part: feature:715982-716103:-1:exon
so has part: feature:715788-715876:-1:exon
so has part: feature:715683-715718:-1:exon
so has part: feature:715260-715353:-1:exon
so has part: feature:714279-714345:-1:exon
so has part: feature:714079-714176:-1:exon
so has part: feature:713290-713354:-1:exon
so has part: feature:712622-713118:-1:exon
so has part: feature:712457-712544:-1:exon
so has part: feature:712187-712327:-1:exon
so has part: feature:710739-711307:-1:exon
so has part: feature:710357-710495:-1:exon
so has part: feature:710207-710275:-1:exon
so has part: feature:709973-710098:-1:exon
so has part: feature:709307-709876:-1:exon

position:719834:-1
position: 719834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:718994-719834:-1:exon

position:718994:-1
position: 718994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:715982-716103:-1:exon

position:715982:-1
position: 715982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:716103:-1
position: 716103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:715788-715876:-1:exon

position:715788:-1
position: 715788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715876:-1
position: 715876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:715683-715718:-1:exon

position:715683:-1
position: 715683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715718:-1
position: 715718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:715260-715353:-1:exon

position:715260:-1
position: 715260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715353:-1
position: 715353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:714279-714345:-1:exon

position:714279:-1
position: 714279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:714345:-1
position: 714345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:714079-714176:-1:exon

position:714079:-1
position: 714079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:714176:-1
position: 714176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:713290-713354:-1:exon

position:713290:-1
position: 713290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713354:-1
position: 713354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:712622-713118:-1:exon

position:712622:-1
position: 712622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713118:-1
position: 713118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:712457-712544:-1:exon

position:712457:-1
position: 712457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712544:-1
position: 712544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:712187-712327:-1:exon

position:712187:-1
position: 712187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712327:-1
position: 712327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:710739-711307:-1:exon

position:710739:-1
position: 710739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711307:-1
position: 711307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:710357-710495:-1:exon

position:710357:-1
position: 710357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710495:-1
position: 710495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:710207-710275:-1:exon

position:710207:-1
position: 710207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710275:-1
position: 710275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:709973-710098:-1:exon

position:709973:-1
position: 709973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710098:-1
position: 710098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:709307-709876:-1:exon

position:709876:-1
position: 709876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100244958
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100244958
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmodulin-interacting protein 111 isoform X1
translation: MEQKHILLSALSVGVGVGVGLGLASGQTVSRWTGSGSGSSDALTAEKMEQELLRQVVEGRESKVTFDEFPYYLSEQTRVLLTSAAYVHLKQAEFSKYTRNLSPASRAILLSGPAELYQQMLAKALAHYFEAKLLLLDVTDFSLKIQNKYGSASKESSMKRSISTTTLERVSSLLGSLSLIPQMEESKALSKSSVGGTLRRQSSGMDIASRGRDCSCNPPKIRRNASASANMNNMASQFAPYPAPLKRTSSWSFDEKLLIQSLYKVLVSVSKTSPLVLYIRDVEKLLSRSQRIYNLFQKMLNKLSGSILILGSQIIDPDDDYGDVDQRLTALFPYNIEIRPPEDENHFVSWKTQLEEDMKMIQLQDNKNHIIEVLAANDLDCRDLDSICLEDTMVLSNYIEEIVVSAVSYHLMNNKDHEYKNGKLVISSKSLAHGLSLFQEGKSGSKDTSKLEAHAEPSKEAGGEEGAGVKPAAKAESTAPENKNEAGSLIVAVKEGDNPIPASKAPEVPPDNEFEKRIRPEVIPASEIGVTFADIGAMDEIKESLQELVMLPLRRPDLFEGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENREMIMKTLLSKEKVAEGLDFKELATMTEGYSGSDLKNLCTTAAYRPVRELIQQERLKDLEKKRRAEQRLSPDDDDVFEDTEERVITLRPLNMEDFRHAKNQVAASFAAEGSIMSELKQWNDSYGEGGSRKKQQLSYFL
SIO_010081: LOC100244958
subclass of: SO_0000673
so part of: LOC100244958
location: complement(join(709763..709876,709973..710098,710207..710275,710357..710495,710739..711307,712187..712327,712457..712544,712622..713118,713290..713354,714079..714176,714279..714345,715260..715353,715683..715718,715788..715876,715982..716103,718994..719214))
location: region:709763-719214:-1
so has part: feature:718994-719214:-1:exon
so has part: feature:715982-716103:-1:exon
so has part: feature:715788-715876:-1:exon
so has part: feature:715683-715718:-1:exon
so has part: feature:715260-715353:-1:exon
so has part: feature:714279-714345:-1:exon
so has part: feature:714079-714176:-1:exon
so has part: feature:713290-713354:-1:exon
so has part: feature:712622-713118:-1:exon
so has part: feature:712457-712544:-1:exon
so has part: feature:712187-712327:-1:exon
so has part: feature:710739-711307:-1:exon
so has part: feature:710357-710495:-1:exon
so has part: feature:710207-710275:-1:exon
so has part: feature:709973-710098:-1:exon
so has part: feature:709763-709876:-1:exon

XP_010658526.1
type: Protein
SIO_000068: ncbiprotein

position:709763:-1
position: 709763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719214:-1
position: 719214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:718994-719214:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:715982-716103:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:715788-715876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:715683-715718:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:715260-715353:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:714279-714345:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:714079-714176:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:713290-713354:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:712622-713118:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:712457-712544:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:712187-712327:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:710739-711307:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:710357-710495:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:710207-710275:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:709973-710098:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:709763-709876:-1:exon

LOC100244958
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100244958
product: calmodulin-interacting protein 111, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_010660229.2
SIO_010081: LOC100244958
subclass of: SO_0000673
so part of: LOC100244958
location: complement(join(709977..710095,710203..710275,710357..710495,710739..711307,712187..712327,712457..712544,712622..713118,713290..713354,714079..714176,714279..714345,715260..715353,715683..715718,715788..715876,715982..716103,718994..719836))
location: region:709977-719836:-1
so has part: feature:718994-719836:-1:exon
so has part: feature:715982-716103:-1:exon
so has part: feature:715788-715876:-1:exon
so has part: feature:715683-715718:-1:exon
so has part: feature:715260-715353:-1:exon
so has part: feature:714279-714345:-1:exon
so has part: feature:714079-714176:-1:exon
so has part: feature:713290-713354:-1:exon
so has part: feature:712622-713118:-1:exon
so has part: feature:712457-712544:-1:exon
so has part: feature:712187-712327:-1:exon
so has part: feature:710739-711307:-1:exon
so has part: feature:710357-710495:-1:exon
so has part: feature:710203-710275:-1:exon
so has part: feature:709977-710095:-1:exon

position:709977:-1
position: 709977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:718994-719836:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:715982-716103:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:715788-715876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:715683-715718:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:715260-715353:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:714279-714345:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:714079-714176:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:713290-713354:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:712622-713118:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:712457-712544:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:712187-712327:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:710739-711307:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:710357-710495:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:710203-710275:-1:exon

position:710203:-1
position: 710203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:709977-710095:-1:exon

position:710095:-1
position: 710095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100244958
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100244958
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmodulin-interacting protein 111 isoform X2
translation: MEQKHILLSALSVGVGVGVGLGLASGQTVSRWTGSGSGSSDALTAEKMEQELLRQVVEGRESKVTFDEFPYYLSEQTRVLLTSAAYVHLKQAEFSKYTRNLSPASRAILLSGPAELYQQMLAKALAHYFEAKLLLLDVTDFSLKIQNKYGSASKESSMKRSISTTTLERVSSLLGSLSLIPQMEESKALSKSSVGGTLRRQSSGMDIASRGRDCSCNPPKIRRNASASANMNNMASQFAPYPAPLKRTSSWSFDEKLLIQSLYKVLVSVSKTSPLVLYIRDVEKLLSRSQRIYNLFQKMLNKLSGSILILGSQIIDPDDDYGDVDQRLTALFPYNIEIRPPEDENHFVSWKTQLEEDMKMIQLQDNKNHIIEVLAANDLDCRDLDSICLEDTMVLSNYIEEIVVSAVSYHLMNNKDHEYKNGKLVISSKSLAHGLSLFQEGKSGSKDTSKLEAHAEPSKEAGGEEGAGVKPAAKAESTAPENKNEAGSLIVAVKEGDNPIPASKAPEVPPDNEFEKRIRPEVIPASEIGVTFADIGAMDEIKESLQELVMLPLRRPDLFEGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENREMIMKTLLSKEKVAEGLDFKELATMTEGYSGSDLKNLCTTAAYRPVRELIQQERLKDLVKKTES
SIO_010081: LOC100244958
subclass of: SO_0000673
so part of: LOC100244958
location: complement(join(710079..710095,710203..710275,710357..710495,710739..711307,712187..712327,712457..712544,712622..713118,713290..713354,714079..714176,714279..714345,715260..715353,715683..715718,715788..715876,715982..716103,718994..719214))
location: region:710079-719214:-1
so has part: feature:718994-719214:-1:exon
so has part: feature:715982-716103:-1:exon
so has part: feature:715788-715876:-1:exon
so has part: feature:715683-715718:-1:exon
so has part: feature:715260-715353:-1:exon
so has part: feature:714279-714345:-1:exon
so has part: feature:714079-714176:-1:exon
so has part: feature:713290-713354:-1:exon
so has part: feature:712622-713118:-1:exon
so has part: feature:712457-712544:-1:exon
so has part: feature:712187-712327:-1:exon
so has part: feature:710739-711307:-1:exon
so has part: feature:710357-710495:-1:exon
so has part: feature:710203-710275:-1:exon
so has part: feature:710079-710095:-1:exon

XP_010658531.1
type: Protein
SIO_000068: ncbiprotein

position:710079:-1
position: 710079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:718994-719214:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:715982-716103:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:715788-715876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:715683-715718:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:715260-715353:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:714279-714345:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:714079-714176:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:713290-713354:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:712622-713118:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:712457-712544:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:712187-712327:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:710739-711307:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:710357-710495:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:710203-710275:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:710079-710095:-1:exon

TRNAL-CAA
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: TRNAL-CAA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 721662..721745
location: region:721662-721745:1
so has part: feature:721662-721745:1:exon
subclass of: SO_0000663

109121917
type: Gene
SIO_000068: ncbigene

position:721662:1
position: 721662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:721745:1
position: 721745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:721662-721745:1:exon

TRNAL-CAA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 29760
gene: TRNAL-CAA
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon CAA); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:721696..721698,aa:Leu,seq:caa)
SIO_010081: TRNAL-CAA
subclass of: SO_0000673
so part of: TRNAL-CAA
location: 721662..721745
location: region:721662-721745:1
so has part: feature:721662-721745:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:721662-721745:1:exon

LOC100250094
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100250094
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(722221..726981)
location: region:722221-726981:-1
so has part: feature:722221-726981:-1:exon
subclass of: SO_0000010

100250094
type: Gene
SIO_000068: ncbigene

position:722221:-1
position: 722221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:726981:-1
position: 726981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:722221-726981:-1:exon

LOC100250094
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100250094
product: uncharacterized LOC100250094
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 22 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 246 samples with support for all annotated introns
transcript id: XM_002276893.3
SIO_010081: LOC100250094
subclass of: SO_0000673
so part of: LOC100250094
location: complement(join(722221..722970,724386..724457,725606..725758,726516..726981))
location: region:722221-726981:-1
so has part: feature:726516-726981:-1:exon
so has part: feature:725606-725758:-1:exon
so has part: feature:724386-724457:-1:exon
so has part: feature:722221-722970:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:726516-726981:-1:exon

position:726516:-1
position: 726516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:725606-725758:-1:exon

position:725606:-1
position: 725606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:725758:-1
position: 725758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:724386-724457:-1:exon

position:724386:-1
position: 724386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:724457:-1
position: 724457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:722221-722970:-1:exon

position:722970:-1
position: 722970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100250094
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100250094
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100250094
translation: MWSSCSHALSRCPSLPPTISRLRLPNRPGTLYPLSSGFRISESHSKFPKSKWKISCFRHEDSSSETPKSESIDDILSGELVKPEFNKPSTVQKDWASSFREAADVILRVIGKPWVVPWTSETILQVMLLWIVSFWFVGSWMIPFTAHVVGFSKESLTYRGQALYSLLTDVAEGLAGIAILHRCLSRFSPLPSDWFRFSLRGNWLADVAIGCLMFPLVNRLSQFNLDLLPLLPSTPVTLSSVEQSIMARDPVAMGLYALVVSVCAPVWEEIVFRGFLLPSLTKYMPVWCSILVSSVAFALAHFNVQRMLPLIFLGVVMGVIFARSRNLLPSMLLHSLWNGFVFLDLMK
SIO_010081: LOC100250094
subclass of: SO_0000673
so part of: LOC100250094
location: complement(join(722302..722970,724386..724457,725606..725758,726516..726665))
location: region:722302-726665:-1
so has part: feature:726516-726665:-1:exon
so has part: feature:725606-725758:-1:exon
so has part: feature:724386-724457:-1:exon
so has part: feature:722302-722970:-1:exon

XP_002276929.1
type: Protein
SIO_000068: ncbiprotein

position:722302:-1
position: 722302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:726665:-1
position: 726665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:726516-726665:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:725606-725758:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:724386-724457:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:722302-722970:-1:exon

LOC100260429
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100260429
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(727414..732540)
location: region:727414-732540:-1
so has part: feature:727414-732540:-1:exon
subclass of: SO_0000010

100260429
type: Gene
SIO_000068: ncbigene

position:727414:-1
position: 727414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:732540:-1
position: 732540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:727414-732540:-1:exon

LOC100260429
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100260429
product: potassium transporter 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_010660241.2
SIO_010081: LOC100260429
subclass of: SO_0000673
so part of: LOC100260429
location: complement(join(727414..728628,728729..728983,729313..729427,729506..729558,729645..729905,730722..730772,730873..731121,731223..731466,732466..732540))
location: region:727414-732540:-1
so has part: feature:732466-732540:-1:exon
so has part: feature:731223-731466:-1:exon
so has part: feature:730873-731121:-1:exon
so has part: feature:730722-730772:-1:exon
so has part: feature:729645-729905:-1:exon
so has part: feature:729506-729558:-1:exon
so has part: feature:729313-729427:-1:exon
so has part: feature:728729-728983:-1:exon
so has part: feature:727414-728628:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:732466-732540:-1:exon

position:732466:-1
position: 732466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:731223-731466:-1:exon

position:731223:-1
position: 731223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:731466:-1
position: 731466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:730873-731121:-1:exon

position:730873:-1
position: 730873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:731121:-1
position: 731121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:730722-730772:-1:exon

position:730722:-1
position: 730722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:730772:-1
position: 730772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:729645-729905:-1:exon

position:729645:-1
position: 729645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:729905:-1
position: 729905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:729506-729558:-1:exon

position:729506:-1
position: 729506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:729558:-1
position: 729558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:729313-729427:-1:exon

position:729313:-1
position: 729313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:729427:-1
position: 729427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:728729-728983:-1:exon

position:728729:-1
position: 728729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728983:-1
position: 728983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:727414-728628:-1:exon

position:728628:-1
position: 728628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100260429
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100260429
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium transporter 3
translation: MAQIRNQHKRVLLLAYQSLGIVFGSLSTSPLYVYKITFSGWLQHYQTEDAVFGACSLIFWTFMLLPLFKYVVIMLSVDDNGEGGTFALYSLLCRHAKLCLLPNHQAADEDLSTYFSPRYSNRNIPPSVFKRYVEKHKNTRTGLLLVVLFGASMVIAIGVITPSITVLSSIEGLKVRVKNADDRMVVAITCFVLVCLIVRQHHGTHRVGITFAPIVLLWLLSVALLGIYNITKWNPRIYQALSPYYIYKFFRNTGKDGWISLGGIFLCITGTEAMFADLGQFTATSMRVAFFVVIYPCLMLQYTGQAAFLSKNFSAVDISFYASVPEPLFWPVFVLAISTGIVASQAAISETFSIVQQCQALGCFPRVKIVHTSRWIHGKIYIPEINWILMILILTVTLGFGDTTLMGNAYGIAYMSVTLVTTLLMTLAITLVWHKTLVLALSFLLLFGSMEIIFLSSSYMRIHRGGWLPIMLSSVFLAVMYVWHYGSRRKYLSDQQNRIPMKRILSLGPSLGIIRTPGIGVIYTELATGVPATFSHFLTNLPSFYQVIVFVCIKTIHVPYISHKERYLIGRIGPKAYQMYRCIIRYGYKDVHKSNEDFEYNLVMSIAEFIQLESEGSRTPDGSVDGRLAVVRTSEKTGMRMVMSESANLGESYGSGSSSWTGSAALSSSKSATLRRLQALYEQEVPAHLSRRRHVRYQLLDKNYKHPHVKEELLELVEAKHAEVAYVIGHSYIKARRNSSFLKKLAVDVAYSFLRRNCRSPGVALHIPHISLIMAGMNYYV
SIO_010081: LOC100260429
subclass of: SO_0000673
so part of: LOC100260429
location: complement(join(727514..728628,728729..728983,729313..729427,729506..729558,729645..729905,730722..730772,730873..731121,731223..731466,732466..732468))
location: region:727514-732468:-1
so has part: feature:732466-732468:-1:exon
so has part: feature:731223-731466:-1:exon
so has part: feature:730873-731121:-1:exon
so has part: feature:730722-730772:-1:exon
so has part: feature:729645-729905:-1:exon
so has part: feature:729506-729558:-1:exon
so has part: feature:729313-729427:-1:exon
so has part: feature:728729-728983:-1:exon
so has part: feature:727514-728628:-1:exon

XP_010658543.1
type: Protein
SIO_000068: ncbiprotein

position:727514:-1
position: 727514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:732468:-1
position: 732468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:732466-732468:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:731223-731466:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:730873-731121:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:730722-730772:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:729645-729905:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:729506-729558:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:729313-729427:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:728729-728983:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:727514-728628:-1:exon

TRNAG-UCC
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: TRNAG-UCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 729139..729210
location: region:729139-729210:1
so has part: feature:729139-729210:1:exon
subclass of: SO_0000663

109121929
type: Gene
SIO_000068: ncbigene

position:729139:1
position: 729139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:729210:1
position: 729210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:729139-729210:1:exon

TRNAG-UCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 29760
gene: TRNAG-UCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon UCC); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:729172..729174,aa:Gly,seq:tcc)
SIO_010081: TRNAG-UCC
subclass of: SO_0000673
so part of: TRNAG-UCC
location: 729139..729210
location: region:729139-729210:1
so has part: feature:729139-729210:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:729139-729210:1:exon

LOC100265650
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100265650
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(734362..743568)
location: region:734362-743568:-1
so has part: feature:734362-743568:-1:exon
subclass of: SO_0000010

100265650
type: Gene
SIO_000068: ncbigene

position:734362:-1
position: 734362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743568:-1
position: 743568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:734362-743568:-1:exon

LOC100265650
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100265650
product: calcium-dependent protein kinase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 154 samples with support for all annotated introns
transcript id: XM_019216355.1
SIO_010081: LOC100265650
subclass of: SO_0000673
so part of: LOC100265650
location: complement(join(734362..734610,734835..734936,737285..737384,737527..737654,737820..737987,738100..738212,739047..739199,739678..739821,742800..743496))
location: region:734362-743496:-1
so has part: feature:742800-743496:-1:exon
so has part: feature:739678-739821:-1:exon
so has part: feature:739047-739199:-1:exon
so has part: feature:738100-738212:-1:exon
so has part: feature:737820-737987:-1:exon
so has part: feature:737527-737654:-1:exon
so has part: feature:737285-737384:-1:exon
so has part: feature:734835-734936:-1:exon
so has part: feature:734362-734610:-1:exon

position:743496:-1
position: 743496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:742800-743496:-1:exon

position:742800:-1
position: 742800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:739678-739821:-1:exon

position:739678:-1
position: 739678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739821:-1
position: 739821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:739047-739199:-1:exon

position:739047:-1
position: 739047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739199:-1
position: 739199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:738100-738212:-1:exon

position:738100:-1
position: 738100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:738212:-1
position: 738212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:737820-737987:-1:exon

position:737820:-1
position: 737820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:737987:-1
position: 737987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:737527-737654:-1:exon

position:737527:-1
position: 737527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:737654:-1
position: 737654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:737285-737384:-1:exon

position:737285:-1
position: 737285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:737384:-1
position: 737384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:734835-734936:-1:exon

position:734835:-1
position: 734835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:734936:-1
position: 734936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:734362-734610:-1:exon

position:734610:-1
position: 734610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100265650
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100265650
product: calcium-dependent protein kinase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 212 samples with support for all annotated introns
transcript id: XM_010660258.2
SIO_010081: LOC100265650
subclass of: SO_0000673
so part of: LOC100265650
location: complement(join(734362..734652,734835..734936,737285..737384,737527..737654,737820..737987,738100..738212,739047..739199,739678..739821,742800..743496))
location: region:734362-743496:-1
so has part: feature:742800-743496:-1:exon
so has part: feature:739678-739821:-1:exon
so has part: feature:739047-739199:-1:exon
so has part: feature:738100-738212:-1:exon
so has part: feature:737820-737987:-1:exon
so has part: feature:737527-737654:-1:exon
so has part: feature:737285-737384:-1:exon
so has part: feature:734835-734936:-1:exon
so has part: feature:734362-734652:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:742800-743496:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:739678-739821:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:739047-739199:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:738100-738212:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:737820-737987:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:737527-737654:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:737285-737384:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:734835-734936:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:734362-734652:-1:exon

position:734652:-1
position: 734652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100265650
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100265650
product: calcium-dependent protein kinase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 227 samples with support for all annotated introns
transcript id: XM_002272234.4
SIO_010081: LOC100265650
subclass of: SO_0000673
so part of: LOC100265650
location: complement(join(734390..734936,737285..737384,737527..737654,737820..737987,738100..738212,739047..739199,739678..739821,742800..743568))
location: region:734390-743568:-1
so has part: feature:742800-743568:-1:exon
so has part: feature:739678-739821:-1:exon
so has part: feature:739047-739199:-1:exon
so has part: feature:738100-738212:-1:exon
so has part: feature:737820-737987:-1:exon
so has part: feature:737527-737654:-1:exon
so has part: feature:737285-737384:-1:exon
so has part: feature:734390-734936:-1:exon

position:734390:-1
position: 734390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:742800-743568:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:739678-739821:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:739047-739199:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:738100-738212:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:737820-737987:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:737527-737654:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:737285-737384:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:734390-734936:-1:exon

LOC100265650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100265650
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-dependent protein kinase 1
translation: MGNCNGLPSGDTQFQINAGRDGGVRPSSHAHSSNGLNVRPPSPSPPPPPRTAAPVVHRPLAGNGRVLGRPMEDVRQTYIFGRELGRGQFGVTYLVTHKETKEQFACKSIATRKLVNRDDIEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLVMELCAGGELFDRIIAKGHYSERAAAALCRQIVTVVHNCHTMGVMHRDLKPENFLFLSTAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRSYGAEADIWSAGVILFILLSGVPPFWGENEQSIFDTILRGHIDFSSDPWPSISNSAKDLVKKMLRADPKERLTAIDVLNHPWMKEDGASDKPIDIAVLTRVKQFRAMNKLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTITYEELKNGLPKLGTKLSESEVRQLMEAADVDGNGTIDYIEFISATMHMNRMEREDHLYRAFEYFDKDKSGYITMEELEHALKRYNMGDEKTIKEIIAEVDTDHDGRINYEEFAAMMRKGNPDLITNRRRK
SIO_010081: LOC100265650
subclass of: SO_0000673
so part of: LOC100265650
location: complement(join(734853..734936,737285..737384,737527..737654,737820..737987,738100..738212,739047..739199,739678..739821,742800..743496))
location: region:734853-743496:-1
so has part: feature:742800-743496:-1:exon
so has part: feature:739678-739821:-1:exon
so has part: feature:739047-739199:-1:exon
so has part: feature:738100-738212:-1:exon
so has part: feature:737820-737987:-1:exon
so has part: feature:737527-737654:-1:exon
so has part: feature:737285-737384:-1:exon
so has part: feature:734853-734936:-1:exon

XP_019071900.1
type: Protein
SIO_000068: ncbiprotein

position:734853:-1
position: 734853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:742800-743496:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:739678-739821:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:739047-739199:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:738100-738212:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:737820-737987:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:737527-737654:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:737285-737384:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:734853-734936:-1:exon

LOC100265650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100265650
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-dependent protein kinase 1
translation: MGNCNGLPSGDTQFQINAGRDGGVRPSSHAHSSNGLNVRPPSPSPPPPPRTAAPVVHRPLAGNGRVLGRPMEDVRQTYIFGRELGRGQFGVTYLVTHKETKEQFACKSIATRKLVNRDDIEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLVMELCAGGELFDRIIAKGHYSERAAAALCRQIVTVVHNCHTMGVMHRDLKPENFLFLSTAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRSYGAEADIWSAGVILFILLSGVPPFWGENEQSIFDTILRGHIDFSSDPWPSISNSAKDLVKKMLRADPKERLTAIDVLNHPWMKEDGASDKPIDIAVLTRVKQFRAMNKLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTITYEELKNGLPKLGTKLSESEVRQLMEAADVDGNGTIDYIEFISATMHMNRMEREDHLYRAFEYFDKDKSGYITMEELEHALKRYNMGDEKTIKEIIAEVDTDHDGRINYEEFAAMMRKGNPDLITNRRRK
SIO_010081: LOC100265650
subclass of: SO_0000673
so part of: LOC100265650
location: complement(join(734853..734936,737285..737384,737527..737654,737820..737987,738100..738212,739047..739199,739678..739821,742800..743496))
location: region:734853-743496:-1
so has part: feature:742800-743496:-1:exon
so has part: feature:739678-739821:-1:exon
so has part: feature:739047-739199:-1:exon
so has part: feature:738100-738212:-1:exon
so has part: feature:737820-737987:-1:exon
so has part: feature:737527-737654:-1:exon
so has part: feature:737285-737384:-1:exon
so has part: feature:734853-734936:-1:exon

XP_002272270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:742800-743496:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:739678-739821:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:739047-739199:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:738100-738212:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:737820-737987:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:737527-737654:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:737285-737384:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:734853-734936:-1:exon

LOC100265650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100265650
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-dependent protein kinase 1
translation: MGNCNGLPSGDTQFQINAGRDGGVRPSSHAHSSNGLNVRPPSPSPPPPPRTAAPVVHRPLAGNGRVLGRPMEDVRQTYIFGRELGRGQFGVTYLVTHKETKEQFACKSIATRKLVNRDDIEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLVMELCAGGELFDRIIAKGHYSERAAAALCRQIVTVVHNCHTMGVMHRDLKPENFLFLSTAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRSYGAEADIWSAGVILFILLSGVPPFWGENEQSIFDTILRGHIDFSSDPWPSISNSAKDLVKKMLRADPKERLTAIDVLNHPWMKEDGASDKPIDIAVLTRVKQFRAMNKLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTITYEELKNGLPKLGTKLSESEVRQLMEAADVDGNGTIDYIEFISATMHMNRMEREDHLYRAFEYFDKDKSGYITMEELEHALKRYNMGDEKTIKEIIAEVDTDHDGRINYEEFAAMMRKGNPDLITNRRRK
SIO_010081: LOC100265650
subclass of: SO_0000673
so part of: LOC100265650
location: complement(join(734853..734936,737285..737384,737527..737654,737820..737987,738100..738212,739047..739199,739678..739821,742800..743496))
location: region:734853-743496:-1
so has part: feature:742800-743496:-1:exon
so has part: feature:739678-739821:-1:exon
so has part: feature:739047-739199:-1:exon
so has part: feature:738100-738212:-1:exon
so has part: feature:737820-737987:-1:exon
so has part: feature:737527-737654:-1:exon
so has part: feature:737285-737384:-1:exon
so has part: feature:734853-734936:-1:exon

XP_010658560.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:742800-743496:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:739678-739821:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:739047-739199:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:738100-738212:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:737820-737987:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:737527-737654:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:737285-737384:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:734853-734936:-1:exon

LOC100243329
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100243329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 752972..756374
location: region:752972-756374:1
so has part: feature:752972-756374:1:exon
subclass of: SO_0000010

100243329
type: Gene
SIO_000068: ncbigene

position:752972:1
position: 752972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:756374:1
position: 756374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:752972-756374:1:exon

LOC100243329
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100243329
product: aluminum-activated malate transporter 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 109 samples with support for all annotated introns
transcript id: XM_002272193.3
SIO_010081: LOC100243329
subclass of: SO_0000673
so part of: LOC100243329
location: join(752972..753544,753727..753867,753975..754244,754330..754469,754573..754719,755556..756374)
location: region:752972-756374:1
so has part: feature:752972-753544:1:exon
so has part: feature:753727-753867:1:exon
so has part: feature:753975-754244:1:exon
so has part: feature:754330-754469:1:exon
so has part: feature:754573-754719:1:exon
so has part: feature:755556-756374:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:752972-753544:1:exon

position:753544:1
position: 753544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:753727-753867:1:exon

position:753727:1
position: 753727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753867:1
position: 753867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:753975-754244:1:exon

position:753975:1
position: 753975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754244:1
position: 754244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:754330-754469:1:exon

position:754330:1
position: 754330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754469:1
position: 754469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:754573-754719:1:exon

position:754573:1
position: 754573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754719:1
position: 754719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:755556-756374:1:exon

position:755556:1
position: 755556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100243329
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100243329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aluminum-activated malate transporter 9
translation: MNGKKGSYEINIPSTTKAKQPESRKKSGGGGGGGGFSFKGWMWSVWEFGKEDSNRVKFSLKVGLAVLLVSLLILFRAPYDVFGTNIIWSILTVAIMFEYTVGATFNRGFNRALGSVLAGIFAIAIAQLALSAGRVAEPFIIGVSIFLIGAITSFMKLWPSLVQYEYGFRVILFTYCLIIVSGYRMGNPFRTAMDRLYSIALGGIVAVLVNVLVFPIWAGEQLHKELVKSFDSVADSLEECVRKYLEDDGSDHPEFSKTVMDEFPDEPAYRTCRKTLNSSAKLESLANSAKWEPPHGKFRHFFYPWSEYVKVGAVLRYCAYEVMALHGVLHSEIQAPYNLRLTFQSEIKEATSQAAELVRCLGKDVSSMKQSIKTSLLKKVHSSTERLQYAIDLHSYLLTCHSDPPDTSSKPLSKLLSHAVSYDLSDQLNDPNPQTQDTPSGTLPLPLVTAESYHEMMRKQMRRLHSWPSREVDAFEEDGGLCMDTLPRMRALESTAALSLATFTSLLIEFVARLDHLVEAVDQLAVMAKFNHESL
SIO_010081: LOC100243329
subclass of: SO_0000673
so part of: LOC100243329
location: join(753241..753544,753727..753867,753975..754244,754330..754469,754573..754719,755556..756161)
location: region:753241-756161:1
so has part: feature:753241-753544:1:exon
so has part: feature:753727-753867:1:exon
so has part: feature:753975-754244:1:exon
so has part: feature:754330-754469:1:exon
so has part: feature:754573-754719:1:exon
so has part: feature:755556-756161:1:exon

XP_002272229.1
type: Protein
SIO_000068: ncbiprotein

position:753241:1
position: 753241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:756161:1
position: 756161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:753241-753544:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:753727-753867:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:753975-754244:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:754330-754469:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:754573-754719:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:755556-756161:1:exon

LOC100255255
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100255255
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(757936..762968)
location: region:757936-762968:-1
so has part: feature:757936-762968:-1:exon
subclass of: SO_0000010

100255255
type: Gene
SIO_000068: ncbigene

position:757936:-1
position: 757936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:762968:-1
position: 762968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:757936-762968:-1:exon

LOC100255255
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100255255
product: uncharacterized LOC100255255, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 128 samples with support for all annotated introns
transcript id: XM_010660279.1
SIO_010081: LOC100255255
subclass of: SO_0000673
so part of: LOC100255255
location: complement(join(757936..760591,762805..762968))
location: region:757936-762968:-1
so has part: feature:762805-762968:-1:exon
so has part: feature:757936-760591:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:762805-762968:-1:exon

position:762805:-1
position: 762805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:757936-760591:-1:exon

position:760591:-1
position: 760591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100255255
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100255255
product: uncharacterized LOC100255255, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 250 samples with support for all annotated introns
transcript id: XM_002276566.3
SIO_010081: LOC100255255
subclass of: SO_0000673
so part of: LOC100255255
location: complement(join(757936..760591,761498..761573,762805..762968))
location: region:757936-762968:-1
so has part: feature:762805-762968:-1:exon
so has part: feature:761498-761573:-1:exon
so has part: feature:757936-760591:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:762805-762968:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:761498-761573:-1:exon

position:761498:-1
position: 761498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761573:-1
position: 761573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:757936-760591:-1:exon

LOC100255255
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100255255
product: uncharacterized LOC100255255, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 102 samples with support for all annotated introns
transcript id: XM_019216358.1
SIO_010081: LOC100255255
subclass of: SO_0000673
so part of: LOC100255255
location: complement(join(757936..760591,761498..761573,762353..762738))
location: region:757936-762738:-1
so has part: feature:762353-762738:-1:exon
so has part: feature:761498-761573:-1:exon
so has part: feature:757936-760591:-1:exon

position:762738:-1
position: 762738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:762353-762738:-1:exon

position:762353:-1
position: 762353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:761498-761573:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:757936-760591:-1:exon

LOC100255255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100255255
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100255255
translation: MYSRFQNLGFAANHSSNAFKNLGNSMQVGGARANYCMDTILRLDSPSSSIPDLTASKGVKRKWSLIDGTRGQQVGSSLSLGLGRSSSSSDSKGSSATACTTMSSAKENEEESSMDLELDFTLHLGNEKTPSTKKYAGSSLKALELQTDIDLELSLSTGPAESDITSIHASSTLLHAMDMPLGVARAAHLDEGSTSSPWKPGTSLSSSLHAPLIKKTSLFSHQIPQRMDPTSPVPDLSSSIITTPKSSVTCTSGITQQQPQRSTSSKTCQFKGCGKGARGASGLCIAHGGGRRCQKTGCHKGAEGRTVYCKAHGGGRRCEFLGCTKSAEGRTDYCIAHGGGRRCSHEGCTRAARGKSGLCIRHGGGKRCQKENCTKSAEGLSGLCISHGGGRRCQFPACTKGAQGSTMYCKAHGGGKRCTVPGCTKGAEGSTPFCKGHGGGKRCSFQGGGICPKSVHGGTNFCVAHGGGKRCAVPECTKSARGRTDYCVRHGGGKRCKSEGCGKSAQGSTDFCKAHGGGKRCSWGQVGSQFGSQDGPCSSFARGKTGLCASHNALVQDKRVHGGATLAHTVQIPSPSKPEKMKDVVATEDMNVDIMKMMGSSIVNPAGWTGLELKQVGLPQPHLPAREVRPSPVPVLAPEGRVHGGSLMAMLAGSPGLSPSDSKTLISGGPSEPRKPYMMPQSWM
SIO_010081: LOC100255255
subclass of: SO_0000673
so part of: LOC100255255
location: complement(758266..760320)
location: region:758266-760320:-1
so has part: feature:758266-760320:-1:exon

XP_019071903.1
type: Protein
SIO_000068: ncbiprotein

position:758266:-1
position: 758266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:760320:-1
position: 760320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:758266-760320:-1:exon

LOC100255255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100255255
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100255255
translation: MYSRFQNLGFAANHSSNAFKNLGNSMQVGGARANYCMDTILRLDSPSSSIPDLTASKGVKRKWSLIDGTRGQQVGSSLSLGLGRSSSSSDSKGSSATACTTMSSAKENEEESSMDLELDFTLHLGNEKTPSTKKYAGSSLKALELQTDIDLELSLSTGPAESDITSIHASSTLLHAMDMPLGVARAAHLDEGSTSSPWKPGTSLSSSLHAPLIKKTSLFSHQIPQRMDPTSPVPDLSSSIITTPKSSVTCTSGITQQQPQRSTSSKTCQFKGCGKGARGASGLCIAHGGGRRCQKTGCHKGAEGRTVYCKAHGGGRRCEFLGCTKSAEGRTDYCIAHGGGRRCSHEGCTRAARGKSGLCIRHGGGKRCQKENCTKSAEGLSGLCISHGGGRRCQFPACTKGAQGSTMYCKAHGGGKRCTVPGCTKGAEGSTPFCKGHGGGKRCSFQGGGICPKSVHGGTNFCVAHGGGKRCAVPECTKSARGRTDYCVRHGGGKRCKSEGCGKSAQGSTDFCKAHGGGKRCSWGQVGSQFGSQDGPCSSFARGKTGLCASHNALVQDKRVHGGATLAHTVQIPSPSKPEKMKDVVATEDMNVDIMKMMGSSIVNPAGWTGLELKQVGLPQPHLPAREVRPSPVPVLAPEGRVHGGSLMAMLAGSPGLSPSDSKTLISGGPSEPRKPYMMPQSWM
SIO_010081: LOC100255255
subclass of: SO_0000673
so part of: LOC100255255
location: complement(758266..760320)
location: region:758266-760320:-1
so has part: feature:758266-760320:-1:exon

XP_002276602.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:758266-760320:-1:exon

LOC100255255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100255255
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC100255255
translation: MYSRFQNLGFAANHSSNAFKNLGNSMQVGGARANYCMDTILRLDSPSSSIPDLTASKGVKRKWSLIDGTRGQQVGSSLSLGLGRSSSSSDSKGSSATACTTMSSAKENEEESSMDLELDFTLHLGNEKTPSTKKYAGSSLKALELQTDIDLELSLSTGPAESDITSIHASSTLLHAMDMPLGVARAAHLDEGSTSSPWKPGTSLSSSLHAPLIKKTSLFSHQIPQRMDPTSPVPDLSSSIITTPKSSVTCTSGITQQQPQRSTSSKTCQFKGCGKGARGASGLCIAHGGGRRCQKTGCHKGAEGRTVYCKAHGGGRRCEFLGCTKSAEGRTDYCIAHGGGRRCSHEGCTRAARGKSGLCIRHGGGKRCQKENCTKSAEGLSGLCISHGGGRRCQFPACTKGAQGSTMYCKAHGGGKRCTVPGCTKGAEGSTPFCKGHGGGKRCSFQGGGICPKSVHGGTNFCVAHGGGKRCAVPECTKSARGRTDYCVRHGGGKRCKSEGCGKSAQGSTDFCKAHGGGKRCSWGQVGSQFGSQDGPCSSFARGKTGLCASHNALVQDKRVHGGATLAHTVQIPSPSKPEKMKDVVATEDMNVDIMKMMGSSIVNPAGWTGLELKQVGLPQPHLPAREVRPSPVPVLAPEGRVHGGSLMAMLAGSPGLSPSDSKTLISGGPSEPRKPYMMPQSWM
SIO_010081: LOC100255255
subclass of: SO_0000673
so part of: LOC100255255
location: complement(758266..760320)
location: region:758266-760320:-1
so has part: feature:758266-760320:-1:exon

XP_010658581.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:758266-760320:-1:exon

LOC100248452
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100248452
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(765023..773274)
location: region:765023-773274:-1
so has part: feature:765023-773274:-1:exon
subclass of: SO_0000010

100248452
type: Gene
SIO_000068: ncbigene

position:765023:-1
position: 765023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:773274:-1
position: 773274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:765023-773274:-1:exon

LOC100248452
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100248452
product: GDT1-like protein 1, chloroplastic, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
transcript id: XM_002272155.4
SIO_010081: LOC100248452
subclass of: SO_0000673
so part of: LOC100248452
location: complement(join(765023..765433,765802..765864,766894..766941,767241..767311,767469..767598,768274..768348,768518..768569,769071..769139,769547..769608,770215..770268,771031..771327,772731..772815,773012..773274))
location: region:765023-773274:-1
so has part: feature:773012-773274:-1:exon
so has part: feature:772731-772815:-1:exon
so has part: feature:771031-771327:-1:exon
so has part: feature:770215-770268:-1:exon
so has part: feature:769547-769608:-1:exon
so has part: feature:769071-769139:-1:exon
so has part: feature:768518-768569:-1:exon
so has part: feature:768274-768348:-1:exon
so has part: feature:767469-767598:-1:exon
so has part: feature:767241-767311:-1:exon
so has part: feature:766894-766941:-1:exon
so has part: feature:765802-765864:-1:exon
so has part: feature:765023-765433:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:773012-773274:-1:exon

position:773012:-1
position: 773012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:772731-772815:-1:exon

position:772731:-1
position: 772731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:772815:-1
position: 772815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:771031-771327:-1:exon

position:771031:-1
position: 771031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:771327:-1
position: 771327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:770215-770268:-1:exon

position:770215:-1
position: 770215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770268:-1
position: 770268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:769547-769608:-1:exon

position:769547:-1
position: 769547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:769608:-1
position: 769608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:769071-769139:-1:exon

position:769071:-1
position: 769071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:769139:-1
position: 769139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:768518-768569:-1:exon

position:768518:-1
position: 768518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:768569:-1
position: 768569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:768274-768348:-1:exon

position:768274:-1
position: 768274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:768348:-1
position: 768348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:767469-767598:-1:exon

position:767469:-1
position: 767469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:767598:-1
position: 767598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:767241-767311:-1:exon

position:767241:-1
position: 767241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:767311:-1
position: 767311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:766894-766941:-1:exon

position:766894:-1
position: 766894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:766941:-1
position: 766941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:765802-765864:-1:exon

position:765802:-1
position: 765802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:765864:-1
position: 765864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:765023-765433:-1:exon

position:765433:-1
position: 765433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100248452
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100248452
product: GDT1-like protein 1, chloroplastic, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transcript id: XM_010660285.2
SIO_010081: LOC100248452
subclass of: SO_0000673
so part of: LOC100248452
location: complement(join(765023..765479,765802..765864,766894..766941,767241..767311,767469..767598,768274..768348,768518..768569,769071..769139,769547..769608,770215..770268,771031..771327,772731..772815,773012..773274))
location: region:765023-773274:-1
so has part: feature:773012-773274:-1:exon
so has part: feature:772731-772815:-1:exon
so has part: feature:771031-771327:-1:exon
so has part: feature:770215-770268:-1:exon
so has part: feature:769547-769608:-1:exon
so has part: feature:769071-769139:-1:exon
so has part: feature:768518-768569:-1:exon
so has part: feature:768274-768348:-1:exon
so has part: feature:767469-767598:-1:exon
so has part: feature:767241-767311:-1:exon
so has part: feature:766894-766941:-1:exon
so has part: feature:765802-765864:-1:exon
so has part: feature:765023-765479:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:773012-773274:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:772731-772815:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:771031-771327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:770215-770268:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:769547-769608:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:769071-769139:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:768518-768569:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:768274-768348:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:767469-767598:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:767241-767311:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:766894-766941:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:765802-765864:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:765023-765479:-1:exon

position:765479:-1
position: 765479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100248452
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100248452
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GDT1-like protein 1, chloroplastic isoform X1
translation: MRTITLSESVLRTHSLHSPCPKPPKFFSSYLFSLNSRVKEHNSKLSHQYPRLVFSRFSRRWGENTCGKLFGQFLEKDWENSDGIELRYCWNGKASKQLLHNVDDFGFSDKSPAKINYKRENHTTRSIPVLDTSMGGLLKFMLVFGFLTLQDSQQAVAGSDFASGLQLNSYLGDLGDISTGFVSAFLLIFFSELGDKTFFIAALLAARNSGAVVFIGTFGALATMTIISVVLGRTFHYVDEILPFRFGETDLPIDDIAAVCLLVYFGVSTLLEANSSNGLKAEEEQKEAEIAVSEFSGNGAGILSSASTVISTFLLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLLGTFLSEKVIAYIGGVLFLIFAAVTLIEICIKSGTKSQTSPTDLIPVLDSHVIENLPSI
SIO_010081: LOC100248452
subclass of: SO_0000673
so part of: LOC100248452
location: complement(join(765341..765433,765802..765864,766894..766941,767241..767311,767469..767598,768274..768348,768518..768569,769071..769139,769547..769608,770215..770268,771031..771327,772731..772815,773012..773178))
location: region:765341-773178:-1
so has part: feature:773012-773178:-1:exon
so has part: feature:772731-772815:-1:exon
so has part: feature:771031-771327:-1:exon
so has part: feature:770215-770268:-1:exon
so has part: feature:769547-769608:-1:exon
so has part: feature:769071-769139:-1:exon
so has part: feature:768518-768569:-1:exon
so has part: feature:768274-768348:-1:exon
so has part: feature:767469-767598:-1:exon
so has part: feature:767241-767311:-1:exon
so has part: feature:766894-766941:-1:exon
so has part: feature:765802-765864:-1:exon
so has part: feature:765341-765433:-1:exon

XP_002272191.2
type: Protein
SIO_000068: ncbiprotein

position:765341:-1
position: 765341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:773178:-1
position: 773178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:773012-773178:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:772731-772815:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:771031-771327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:770215-770268:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:769547-769608:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:769071-769139:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:768518-768569:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:768274-768348:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:767469-767598:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:767241-767311:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:766894-766941:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:765802-765864:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:765341-765433:-1:exon

LOC100248452
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100248452
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GDT1-like protein 1, chloroplastic isoform X2
translation: MRTITLSESVLRTHSLHSPCPKPPKFFSSYLFSLNSRVKEHNSKLSHQYPRLVFSRFSRRWGENTCGKLFGQFLEKDWENSDGIELRYCWNGKASKQLLHNVDDFGFSDKSPAKINYKRENHTTRSIPVLDTSMGGLLKFMLVFGFLTLQDSQQAVAGSDFASGLQLNSYLGDLGDISTGFVSAFLLIFFSELGDKTFFIAALLAARNSGAVVFIGTFGALATMTIISVVLGRTFHYVDEILPFRFGETDLPIDDIAAVCLLVYFGVSTLLEANSSNGLKAEEEQKEAEIAVSEFSGNGAGILSSASTVISTFLLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLLGTFLSEKVIAYIGGVLFLIFAAVTLIEIIIRLRLFSASIFLSAVYQKWYQESNFSY
SIO_010081: LOC100248452
subclass of: SO_0000673
so part of: LOC100248452
location: complement(join(765393..765479,765802..765864,766894..766941,767241..767311,767469..767598,768274..768348,768518..768569,769071..769139,769547..769608,770215..770268,771031..771327,772731..772815,773012..773178))
location: region:765393-773178:-1
so has part: feature:773012-773178:-1:exon
so has part: feature:772731-772815:-1:exon
so has part: feature:771031-771327:-1:exon
so has part: feature:770215-770268:-1:exon
so has part: feature:769547-769608:-1:exon
so has part: feature:769071-769139:-1:exon
so has part: feature:768518-768569:-1:exon
so has part: feature:768274-768348:-1:exon
so has part: feature:767469-767598:-1:exon
so has part: feature:767241-767311:-1:exon
so has part: feature:766894-766941:-1:exon
so has part: feature:765802-765864:-1:exon
so has part: feature:765393-765479:-1:exon

XP_010658587.1
type: Protein
SIO_000068: ncbiprotein

position:765393:-1
position: 765393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:773012-773178:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:772731-772815:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:771031-771327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:770215-770268:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:769547-769608:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:769071-769139:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:768518-768569:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:768274-768348:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:767469-767598:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:767241-767311:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:766894-766941:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:765802-765864:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:765393-765479:-1:exon

LOC100248452
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100248452
product: GDT1-like protein 1, chloroplastic, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_019216364.1
SIO_010081: LOC100248452
subclass of: SO_0000673
so part of: LOC100248452
location: complement(join(766681..766792,766894..766941,767241..767311,767469..767598,768274..768348,768518..768569,769071..769139,769547..769608,770215..770268,771031..771327,772731..772815,773012..773274))
location: region:766681-773274:-1
so has part: feature:773012-773274:-1:exon
so has part: feature:772731-772815:-1:exon
so has part: feature:771031-771327:-1:exon
so has part: feature:770215-770268:-1:exon
so has part: feature:769547-769608:-1:exon
so has part: feature:769071-769139:-1:exon
so has part: feature:768518-768569:-1:exon
so has part: feature:768274-768348:-1:exon
so has part: feature:767469-767598:-1:exon
so has part: feature:767241-767311:-1:exon
so has part: feature:766894-766941:-1:exon
so has part: feature:766681-766792:-1:exon

position:766681:-1
position: 766681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:773012-773274:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:772731-772815:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:771031-771327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:770215-770268:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:769547-769608:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:769071-769139:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:768518-768569:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:768274-768348:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:767469-767598:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:767241-767311:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:766894-766941:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:766681-766792:-1:exon

position:766792:-1
position: 766792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100248452
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100248452
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GDT1-like protein 1, chloroplastic isoform X3
translation: MRTITLSESVLRTHSLHSPCPKPPKFFSSYLFSLNSRVKEHNSKLSHQYPRLVFSRFSRRWGENTCGKLFGQFLEKDWENSDGIELRYCWNGKASKQLLHNVDDFGFSDKSPAKINYKRENHTTRSIPVLDTSMGGLLKFMLVFGFLTLQDSQQAVAGSDFASGLQLNSYLGDLGDISTGFVSAFLLIFFSELGDKTFFIAALLAARNSGAVVFIGTFGALATMTIISVVLGRTFHYVDEILPFRFGETDLPIDDIAAVCLLVYFGVSTLLEANSSNGLKAEEEQKEAEIAVSEFSGNGAGILSSASTVISTFLLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLLGTFLSEKYTSQAGRKEKVGLPDSAASMENHFYHFHNKCNLI
SIO_010081: LOC100248452
subclass of: SO_0000673
so part of: LOC100248452
location: complement(join(766688..766792,766894..766941,767241..767311,767469..767598,768274..768348,768518..768569,769071..769139,769547..769608,770215..770268,771031..771327,772731..772815,773012..773178))
location: region:766688-773178:-1
so has part: feature:773012-773178:-1:exon
so has part: feature:772731-772815:-1:exon
so has part: feature:771031-771327:-1:exon
so has part: feature:770215-770268:-1:exon
so has part: feature:769547-769608:-1:exon
so has part: feature:769071-769139:-1:exon
so has part: feature:768518-768569:-1:exon
so has part: feature:768274-768348:-1:exon
so has part: feature:767469-767598:-1:exon
so has part: feature:767241-767311:-1:exon
so has part: feature:766894-766941:-1:exon
so has part: feature:766688-766792:-1:exon

XP_019071909.1
type: Protein
SIO_000068: ncbiprotein

position:766688:-1
position: 766688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:773012-773178:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:772731-772815:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:771031-771327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:770215-770268:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:769547-769608:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:769071-769139:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:768518-768569:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:768274-768348:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:767469-767598:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:767241-767311:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:766894-766941:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:766688-766792:-1:exon

LOC100253560
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100253560
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(774980..775834)
location: region:774980-775834:-1
so has part: feature:774980-775834:-1:exon
subclass of: SO_0000010

100253560
type: Gene
SIO_000068: ncbigene

position:774980:-1
position: 774980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775834:-1
position: 775834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:774980-775834:-1:exon

LOC100253560
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100253560
product: disease resistance response protein 206
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_002272108.3
SIO_010081: LOC100253560
subclass of: SO_0000673
so part of: LOC100253560
location: complement(774980..775834)
location: region:774980-775834:-1
so has part: feature:774980-775834:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:774980-775834:-1:exon

LOC100253560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100253560
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disease resistance response protein 206
translation: MGAHTKVSSALLLLLLLLLISISTSTATPSLGIKHRRPCKRLVFYFHDIIYNGQNSHNATAAIVGAPAWANTTILAGKNHFGDLVVFDDPITLDNNLHSTPVGRAQGFYIYDKKDIFTAWIGFSFVFNSTYHKGSINFAGADPLMNKTRDISVIGGTGDFFMARGIATLMTDAFEGEVYFRLRVDVKLYECW
SIO_010081: LOC100253560
subclass of: SO_0000673
so part of: LOC100253560
location: complement(775165..775743)
location: region:775165-775743:-1
so has part: feature:775165-775743:-1:exon

XP_002272144.1
type: Protein
SIO_000068: ncbiprotein

position:775165:-1
position: 775165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775743:-1
position: 775743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:775165-775743:-1:exon

LOC100260335
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100260335
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(777295..778391)
location: region:777295-778391:-1
so has part: feature:777295-778391:-1:exon
subclass of: SO_0000010

100260335
type: Gene
SIO_000068: ncbigene

position:777295:-1
position: 777295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778391:-1
position: 778391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:777295-778391:-1:exon

LOC100260335
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100260335
product: disease resistance response protein 206
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_002276441.3
SIO_010081: LOC100260335
subclass of: SO_0000673
so part of: LOC100260335
location: complement(777295..778391)
location: region:777295-778391:-1
so has part: feature:777295-778391:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:777295-778391:-1:exon

LOC100260335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100260335
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disease resistance response protein 206
translation: MRAQNLISALFLIFIVFGSSAMGKGPVRGRRPCRSLVFYFHDIIYNGKNSKNATAAIVGAPAWGNKTILGGKNHFGDLVVFDDPITLDNNLHSTPVGRAQGFYIYDKKDVFTAWLGFSFVFNSTEHKGSINFAGADPLMNKTRDISVVGGTGDFFMARGIATLTTDAFEGEVYFRLCVDIKLYECW
SIO_010081: LOC100260335
subclass of: SO_0000673
so part of: LOC100260335
location: complement(777751..778311)
location: region:777751-778311:-1
so has part: feature:777751-778311:-1:exon

XP_002276477.1
type: Protein
SIO_000068: ncbiprotein

position:777751:-1
position: 777751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778311:-1
position: 778311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:777751-778311:-1:exon

LOC100265552
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100265552
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(780810..781585)
location: region:780810-781585:-1
so has part: feature:780810-781585:-1:exon
subclass of: SO_0000010

100265552
type: Gene
SIO_000068: ncbigene

position:780810:-1
position: 780810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:781585:-1
position: 781585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:780810-781585:-1:exon

LOC100265552
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100265552
product: disease resistance response protein 206
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_002276412.4
SIO_010081: LOC100265552
subclass of: SO_0000673
so part of: LOC100265552
location: complement(780810..781585)
location: region:780810-781585:-1
so has part: feature:780810-781585:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:780810-781585:-1:exon

LOC100265552
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100265552
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disease resistance response protein 206
translation: MGARSLVVLLFLMFILSFSSAYQGKKKQYKPCKQMVLYFHDVLYNGQNAANATSAIVGAPQWGNLTILADKFHFGDVVVFDDPITLDNNFHSKPVGRAQGMYIYDTKNTFTAWLGFTFVLNSTDFQGTLNFMGADPIIVKTRDITVVSGTGDFFMHRGIATIMTDAFEGEVYFRLRVDIKLYECW
SIO_010081: LOC100265552
subclass of: SO_0000673
so part of: LOC100265552
location: complement(780924..781481)
location: region:780924-781481:-1
so has part: feature:780924-781481:-1:exon

XP_002276448.1
type: Protein
SIO_000068: ncbiprotein

position:780924:-1
position: 780924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:781481:-1
position: 781481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:780924-781481:-1:exon

LOC100243235
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100243235
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(785036..785795)
location: region:785036-785795:-1
so has part: feature:785036-785795:-1:exon
subclass of: SO_0000010

100243235
type: Gene
SIO_000068: ncbigene

position:785036:-1
position: 785036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:785795:-1
position: 785795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:785036-785795:-1:exon

LOC100243235
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100243235
product: disease resistance response protein 206
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_002276394.4
SIO_010081: LOC100243235
subclass of: SO_0000673
so part of: LOC100243235
location: complement(785036..785795)
location: region:785036-785795:-1
so has part: feature:785036-785795:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:785036-785795:-1:exon

LOC100243235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC100243235
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disease resistance response protein 206
translation: MGARSLVVLLFLMLILSFSSAYQGKKKQYKPCKQMVLYFHDVLYNGQNAANATSAIVGAPQWGNLTILADKFHFGNVVVFDDPITLDNNFHSKPVGRAQGMYIYDTKNTFTSWLGFTFVLNSTDFQGTLNFMGADPIMVKTRDITVVSGTGDFFMHRGIATIMTDAFEGDVYFRLRVDIKLYECW
SIO_010081: LOC100243235
subclass of: SO_0000673
so part of: LOC100243235
location: complement(785156..785713)
location: region:785156-785713:-1
so has part: feature:785156-785713:-1:exon

XP_002276430.1
type: Protein
SIO_000068: ncbiprotein

position:785156:-1
position: 785156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:785713:-1
position: 785713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:785156-785713:-1:exon

LOC109124358
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC109124358
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 789654..790708
location: region:789654-790708:1
so has part: feature:789654-790708:1:exon
subclass of: SO_0000010

109124358
type: Gene
SIO_000068: ncbigene

position:789654:1
position: 789654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790708:1
position: 790708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:789654-790708:1:exon

LOC109124358
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC109124358
product: uncharacterized LOC109124358
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_019226624.1
SIO_010081: LOC109124358
subclass of: SO_0000673
so part of: LOC109124358
location: join(789654..789736,789845..790708)
location: region:789654-790708:1
so has part: feature:789654-789736:1:exon
so has part: feature:789845-790708:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:789654-789736:1:exon

position:789736:1
position: 789736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:789845-790708:1:exon

position:789845:1
position: 789845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109124358
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 29760
gene: LOC109124358
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109124358
translation: MELYVHGRLRPLILHFFHSVYTYHLSSRPSFQIFLSPITFSLSVLSPYPYHARFPLTPTPAMGSTTMLLALFFLSLLTIVPKVQAAFTRDSATRSATRSVLISCVSPSSSSRALRSRAGSPRRRHVVRHALLRPGEQPRQSSPTAATSLGAAGSKSSIGGRLPGGRRRCGEDEGLVFGLGLRLGPVLSLVLGLDYEGFGLGFEFGAQAQAYAEDGAFDLSPFLLLP
SIO_010081: LOC109124358
subclass of: SO_0000673
so part of: LOC109124358
location: 789999..790679
location: region:789999-790679:1
so has part: feature:789999-790679:1:exon

XP_019082169.1
type: Protein
SIO_000068: ncbiprotein

position:789999:1
position: 789999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790679:1
position: 790679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:789999-790679:1:exon

LOC100263862
type: Gene
subclass of: SO_0000704
RO_0002162: 29760
gene: LOC100263862
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(798322..804812)
location: region:798322-804812:-1
so has part: feature:798322-804812:-1:exon
subclass of: SO_0000010

100263862
type: Gene
SIO_000068: ncbigene

position:798322:-1
position: 798322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:804812:-1
position: 804812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:798322-804812:-1:exon

LOC100263862
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 29760
gene: LOC100263862
product: cation/H(+) antiporter 18, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 95 samples with support for all annotated introns
transcript id: XM_002272044.3
SIO_010081: LOC100263862
subclass of: SO_0000673
so part of: LOC100263862
location: complement(join(798322..799944,800055..801056,802086..802333,804574..804812))
location: region:798322-804812:-1
so has part: feature:804574-804812:-1:exon
so has part: feature:802086-802333:-1:exon
so has part: feature:800055-801056:-1:exon
so has part: feature:798322-799944:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:804574-804812:-1:exon

position:804574:-1
position: 804574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:802086-802333:-1:exon

position:802086:-1
position: 802086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802333:-1
position: 802333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:800055-801056:-1:exon

position:800055:-1
position: 800055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:801056:-1
position: 801056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:798322-799944:-1:exon