Chiroxiphia lanceolata isolate bChiLan1 chromosome W, bChiLan1.pri, whole genome shotgun sequence.
type: Entry
definition: Chiroxiphia lanceolata isolate bChiLan1 chromosome W, bChiLan1.pri, whole genome shotgun sequence.
sequence version: NC_045670.1
sequence date: 2020-02-29
sequence: sequence
division: CON
label: NC_045670.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA603801
dblink: SAMN12620979
keyword: WGS
keyword: RefSeq
source: Chiroxiphia lanceolata (lance-tailed manakin)
organism: Chiroxiphia lanceolata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Pipridae; Chiroxiphia.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020567.1.\nAssembly name: bChiLan1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/01/03. The original whole-genome shotgun project has the\naccession WNMC00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 08-OCT-2019\nAssembly Method :: FALCON v. DNANexus 1.9.0; FALCON-Unzip v.\n DNANexus 1.0.6; purge_haplotigs v.\n v1.0.3+ 1.Nov.2018; scaff10x v. 4.1.0;\n Bionano Solve DLS v. 3.2.1; Salsa HiC v.\n 2.2; Arrow smrtanalysis Pacbio polishing\n & gap filling v. 6.0.0.47841; longranger\n align v. 2.2.2; freebayes Illumina\n polishing v. 1.3.1; gEVAL manual curation\n v. 2019-10-08; VGP assembly pipeline v.\n 1.5\nAssembly Name :: bChiLan1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 67.75x\nSequencing Technology :: PacBio Sequel I CLR; llumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Chiroxiphia lanceolata Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 16093816
topology: linear
so has quality: SO_0000987
location: 1..16093816
location: region:1-16093816:1
RO_0002162: 296741

NC_045670
type: RefSeq
SIO_000068: refseq

PRJNA603801
type: BioProject
SIO_000068: bioproject

SAMN12620979
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16093816:1
position: 16093816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16093816:1:source
so part of: sequence
organism: Chiroxiphia lanceolata
mol type: genomic DNA
isolate: bChiLan1
chromosome: W
sex: female
tissue type: isolated red blood cells
dev stage: adult
country: Panama: Isla Boca Btava
lat lon: 8.2166658 N 82.2666656 W
collection date: 14-Apr-2017
collected by: Emily DuVal

296741
type: Taxonomy
SIO_000068: taxonomy

LOC116779960
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779960
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(32632..64963)
location: region:32632-64963:-1
so has part: feature:32632-64963:-1:exon
subclass of: SO_0000010

116779960
type: Gene
SIO_000068: ncbigene

position:32632:-1
position: 32632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64963:-1
position: 64963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32632-64963:-1:exon

LOC116779960
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779960
product: E3 ubiquitin-protein ligase KCMF1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 22% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674473.1
SIO_010081: LOC116779960
subclass of: SO_0000673
so part of: LOC116779960
location: complement(join(32632..32881,34245..34524,40996..41170,44092..44193,50362..50501,62643..62810,64921..64963))
location: region:32632-64963:-1
so has part: feature:64921-64963:-1:exon
so has part: feature:62643-62810:-1:exon
so has part: feature:50362-50501:-1:exon
so has part: feature:44092-44193:-1:exon
so has part: feature:40996-41170:-1:exon
so has part: feature:34245-34524:-1:exon
so has part: feature:32632-32881:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64921-64963:-1:exon

position:64921:-1
position: 64921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:62643-62810:-1:exon

position:62643:-1
position: 62643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62810:-1
position: 62810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:50362-50501:-1:exon

position:50362:-1
position: 50362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50501:-1
position: 50501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:44092-44193:-1:exon

position:44092:-1
position: 44092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44193:-1
position: 44193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:40996-41170:-1:exon

position:40996:-1
position: 40996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41170:-1
position: 41170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:34245-34524:-1:exon

position:34245:-1
position: 34245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34524:-1
position: 34524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:32632-32881:-1:exon

position:32881:-1
position: 32881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116779960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779960
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase KCMF1-like
translation: MVEAESVFNLIYQNSVSCDACLKGNFRGRRYKCLICYDYDLCATCYESGATTTRHTTDHPMQCILTRVDFDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVASEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEHRAPRDLDESSGVRHVRRMFHPGRGLGGPRARRSNMHFTSSSSGGLSSSQSSYSPSNRETMDPIAELLSQLSGVRRSAGQLNSSGPSASQLQQLQMQLQLERQHAQAARQQLETARNATRRTNTSSIPTTLTQSIAATNTSNTENNHQTIQNSQFLLMRLNDPKMSEAERQSKESEQADRSLFVQELLLSTLMQEESSSSDEDERGEIADFGAMGCVDIMPLDVALENLNLKENKGNEPPL
SIO_010081: LOC116779960
subclass of: SO_0000673
so part of: LOC116779960
location: complement(join(32632..32881,34245..34524,40996..41170,44092..44193,50362..50501,62643..62810,64921..64963))
location: region:32632-64963:-1
so has part: feature:64921-64963:-1:exon
so has part: feature:62643-62810:-1:exon
so has part: feature:50362-50501:-1:exon
so has part: feature:44092-44193:-1:exon
so has part: feature:40996-41170:-1:exon
so has part: feature:34245-34524:-1:exon
so has part: feature:32632-32881:-1:exon

XP_032530364.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64921-64963:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:62643-62810:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:50362-50501:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:44092-44193:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:40996-41170:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:34245-34524:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:32632-32881:-1:exon

LOC116780082
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780082
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(39367..40007)
location: region:39367-40007:-1
so has part: feature:39367-40007:-1:exon

116780082
type: Gene
SIO_000068: ncbigene

position:39367:-1
position: 39367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40007:-1
position: 40007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39367-40007:-1:exon

LOC116780082
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116780082
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 49% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116780082
subclass of: SO_0000673
so part of: LOC116780082
location: complement(39367..40007)
location: region:39367-40007:-1
so has part: feature:39367-40007:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39367-40007:-1:exon

LOC116779962
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779962
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 158641..161649
location: region:158641-161649:1
so has part: feature:158641-161649:1:exon

116779962
type: Gene
SIO_000068: ncbigene

position:158641:1
position: 158641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161649:1
position: 161649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158641-161649:1:exon

LOC116779962
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779962
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC116779962
subclass of: SO_0000673
so part of: LOC116779962
location: 158641..158995
location: region:158641-158995:1
so has part: feature:158641-158995:1:exon

position:158995:1
position: 158995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158641-158995:1:exon

LOC116779962
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779962
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC116779962
subclass of: SO_0000673
so part of: LOC116779962
location: 159862..160045
location: region:159862-160045:1
so has part: feature:159862-160045:1:exon

position:159862:1
position: 159862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160045:1
position: 160045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159862-160045:1:exon

LOC116779962
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779962
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC116779962
subclass of: SO_0000673
so part of: LOC116779962
location: 161575..161649
location: region:161575-161649:1
so has part: feature:161575-161649:1:exon

position:161575:1
position: 161575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161575-161649:1:exon

LOC116780084
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780084
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(243605..272861)
location: region:243605-272861:-1
so has part: feature:243605-272861:-1:exon
subclass of: SO_0000010

116780084
type: Gene
SIO_000068: ncbigene

position:243605:-1
position: 243605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272861:-1
position: 272861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243605-272861:-1:exon

LOC116780084
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116780084
product: transitional endoplasmic reticulum ATPase-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 25 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674567.1
SIO_010081: LOC116780084
subclass of: SO_0000673
so part of: LOC116780084
location: complement(join(243605..243710,244128..244282,244624..244779,246198..246506,247815..248027,255883..256005,256116..256279,256792..256904,257922..258057,258308..258441,260537..260639,261075..261206,262945..263075,264602..264744,267448..267620,269487..269598,272826..272861))
location: region:243605-272861:-1
so has part: feature:272826-272861:-1:exon
so has part: feature:269487-269598:-1:exon
so has part: feature:267448-267620:-1:exon
so has part: feature:264602-264744:-1:exon
so has part: feature:262945-263075:-1:exon
so has part: feature:261075-261206:-1:exon
so has part: feature:260537-260639:-1:exon
so has part: feature:258308-258441:-1:exon
so has part: feature:257922-258057:-1:exon
so has part: feature:256792-256904:-1:exon
so has part: feature:256116-256279:-1:exon
so has part: feature:255883-256005:-1:exon
so has part: feature:247815-248027:-1:exon
so has part: feature:246198-246506:-1:exon
so has part: feature:244624-244779:-1:exon
so has part: feature:244128-244282:-1:exon
so has part: feature:243605-243710:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:272826-272861:-1:exon

position:272826:-1
position: 272826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:269487-269598:-1:exon

position:269487:-1
position: 269487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269598:-1
position: 269598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:267448-267620:-1:exon

position:267448:-1
position: 267448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267620:-1
position: 267620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:264602-264744:-1:exon

position:264602:-1
position: 264602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264744:-1
position: 264744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:262945-263075:-1:exon

position:262945:-1
position: 262945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263075:-1
position: 263075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:261075-261206:-1:exon

position:261075:-1
position: 261075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261206:-1
position: 261206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:260537-260639:-1:exon

position:260537:-1
position: 260537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260639:-1
position: 260639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:258308-258441:-1:exon

position:258308:-1
position: 258308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258441:-1
position: 258441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:257922-258057:-1:exon

position:257922:-1
position: 257922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258057:-1
position: 258057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:256792-256904:-1:exon

position:256792:-1
position: 256792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256904:-1
position: 256904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:256116-256279:-1:exon

position:256116:-1
position: 256116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256279:-1
position: 256279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:255883-256005:-1:exon

position:255883:-1
position: 255883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256005:-1
position: 256005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:247815-248027:-1:exon

position:247815:-1
position: 247815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248027:-1
position: 248027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:246198-246506:-1:exon

position:246198:-1
position: 246198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246506:-1
position: 246506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:244624-244779:-1:exon

position:244624:-1
position: 244624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244779:-1
position: 244779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:244128-244282:-1:exon

position:244128:-1
position: 244128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244282:-1
position: 244282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:243605-243710:-1:exon

position:243710:-1
position: 243710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116780084
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116780084
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: transitional endoplasmic reticulum ATPase-like
translation: MASGSDSKADDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAAXCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGGAGPNQGTGGGSGGNVYSEDNDDDLYG
SIO_010081: LOC116780084
subclass of: SO_0000673
so part of: LOC116780084
location: complement(join(243605..243710,244128..244282,244624..244779,246198..246506,247815..248027,255883..256005,256116..256279,256792..256904,257922..258057,258308..258441,260537..260639,261075..261206,262945..263075,264602..264744,267448..267620,269487..269598,272826..272842))
location: region:243605-272842:-1
so has part: feature:272826-272842:-1:exon
so has part: feature:269487-269598:-1:exon
so has part: feature:267448-267620:-1:exon
so has part: feature:264602-264744:-1:exon
so has part: feature:262945-263075:-1:exon
so has part: feature:261075-261206:-1:exon
so has part: feature:260537-260639:-1:exon
so has part: feature:258308-258441:-1:exon
so has part: feature:257922-258057:-1:exon
so has part: feature:256792-256904:-1:exon
so has part: feature:256116-256279:-1:exon
so has part: feature:255883-256005:-1:exon
so has part: feature:247815-248027:-1:exon
so has part: feature:246198-246506:-1:exon
so has part: feature:244624-244779:-1:exon
so has part: feature:244128-244282:-1:exon
so has part: feature:243605-243710:-1:exon

XP_032530458.1
type: Protein
SIO_000068: ncbiprotein

position:272842:-1
position: 272842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272826-272842:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:269487-269598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:267448-267620:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:264602-264744:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:262945-263075:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:261075-261206:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:260537-260639:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:258308-258441:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:257922-258057:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:256792-256904:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:256116-256279:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:255883-256005:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:247815-248027:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:246198-246506:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:244624-244779:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:244128-244282:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:243605-243710:-1:exon

TRNAE-CUC
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: TRNAE-CUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(517007..517078)
location: region:517007-517078:-1
so has part: feature:517007-517078:-1:exon
subclass of: SO_0000663

116780099
type: Gene
SIO_000068: ncbigene

position:517007:-1
position: 517007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517078:-1
position: 517078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517007-517078:-1:exon

TRNAE-CUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 296741
gene: TRNAE-CUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(517043..517045),aa:Glu,seq:ctc)
SIO_010081: TRNAE-CUC
subclass of: SO_0000673
so part of: TRNAE-CUC
location: complement(517007..517078)
location: region:517007-517078:-1
so has part: feature:517007-517078:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:517007-517078:-1:exon

LOC116780088
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780088
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 621269..750273
location: region:621269-750273:1
so has part: feature:621269-750273:1:exon
subclass of: SO_0000010

116780088
type: Gene
SIO_000068: ncbigene

position:621269:1
position: 621269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:750273:1
position: 750273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621269-750273:1:exon

LOC116780088
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116780088
product: ceramide transfer protein-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 45% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674571.1
SIO_010081: LOC116780088
subclass of: SO_0000673
so part of: LOC116780088
location: join(621269..621379,623758..623892,662476..662592,701544..701651,702440..702578,704103..704186,711883..712040,732516..732608,735184..735270,736245..736337,736889..736963,741987..742082,746570..746702,746816..746886,748142..748270,748723..748852,750146..750273)
location: region:621269-750273:1
so has part: feature:621269-621379:1:exon
so has part: feature:623758-623892:1:exon
so has part: feature:662476-662592:1:exon
so has part: feature:701544-701651:1:exon
so has part: feature:702440-702578:1:exon
so has part: feature:704103-704186:1:exon
so has part: feature:711883-712040:1:exon
so has part: feature:732516-732608:1:exon
so has part: feature:735184-735270:1:exon
so has part: feature:736245-736337:1:exon
so has part: feature:736889-736963:1:exon
so has part: feature:741987-742082:1:exon
so has part: feature:746570-746702:1:exon
so has part: feature:746816-746886:1:exon
so has part: feature:748142-748270:1:exon
so has part: feature:748723-748852:1:exon
so has part: feature:750146-750273:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:621269-621379:1:exon

position:621379:1
position: 621379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:623758-623892:1:exon

position:623758:1
position: 623758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623892:1
position: 623892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:662476-662592:1:exon

position:662476:1
position: 662476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:662592:1
position: 662592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:701544-701651:1:exon

position:701544:1
position: 701544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:701651:1
position: 701651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:702440-702578:1:exon

position:702440:1
position: 702440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:702578:1
position: 702578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:704103-704186:1:exon

position:704103:1
position: 704103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:704186:1
position: 704186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:711883-712040:1:exon

position:711883:1
position: 711883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:712040:1
position: 712040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:732516-732608:1:exon

position:732516:1
position: 732516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732608:1
position: 732608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:735184-735270:1:exon

position:735184:1
position: 735184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:735270:1
position: 735270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:736245-736337:1:exon

position:736245:1
position: 736245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:736337:1
position: 736337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:736889-736963:1:exon

position:736889:1
position: 736889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:736963:1
position: 736963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:741987-742082:1:exon

position:741987:1
position: 741987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:742082:1
position: 742082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:746570-746702:1:exon

position:746570:1
position: 746570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746702:1
position: 746702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:746816-746886:1:exon

position:746816:1
position: 746816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746886:1
position: 746886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:748142-748270:1:exon

position:748142:1
position: 748142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:748270:1
position: 748270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:748723-748852:1:exon

position:748723:1
position: 748723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:748852:1
position: 748852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:750146-750273:1:exon

position:750146:1
position: 750146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116780088
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116780088
product: ceramide transfer protein-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 45% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674570.1
SIO_010081: LOC116780088
subclass of: SO_0000673
so part of: LOC116780088
location: join(621284..621379,623758..623892,662476..662592,701544..701651,702440..702578,704103..704186,711883..712040,732516..732608,735184..735270,736245..736337,741987..742082,746570..746702,746816..746886,748142..748270,748723..748852,750146..750273)
location: region:621284-750273:1
so has part: feature:621284-621379:1:exon
so has part: feature:623758-623892:1:exon
so has part: feature:662476-662592:1:exon
so has part: feature:701544-701651:1:exon
so has part: feature:702440-702578:1:exon
so has part: feature:704103-704186:1:exon
so has part: feature:711883-712040:1:exon
so has part: feature:732516-732608:1:exon
so has part: feature:735184-735270:1:exon
so has part: feature:736245-736337:1:exon
so has part: feature:741987-742082:1:exon
so has part: feature:746570-746702:1:exon
so has part: feature:746816-746886:1:exon
so has part: feature:748142-748270:1:exon
so has part: feature:748723-748852:1:exon
so has part: feature:750146-750273:1:exon

position:621284:1
position: 621284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621284-621379:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623758-623892:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:662476-662592:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:701544-701651:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:702440-702578:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:704103-704186:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:711883-712040:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:732516-732608:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:735184-735270:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:736245-736337:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:741987-742082:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:746570-746702:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:746816-746886:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:748142-748270:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:748723-748852:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:750146-750273:1:exon

LOC116780088
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116780088
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide transfer protein-like isoform X2
translation: MSDNQSWNSSGSEEDPETEPGLPVELCGVLSKWTNYIHGWQDRWVVLKSNTLSYYKSEDETEYGCRGSICLSKAVITPHDFDECRFDISVNDSVWYLRAQDPTHRQQWVDAIEQHKTESGYASESSLRRHGSMVSLVSGASGYSATSTSSFKKGHSLHEKLAEMETFRDILCRQVDTLQKYFDACADAVSKDELQRDKVVEDDEDDFPVMRSDGDFSYNSNSSKEKLFPHVTPKGINGIDFKGEAITFKATTAGILATLSHCIELMVKREENWQKRLDKEIEKRRRIEEAYKTAVTELKKKSHFGGPDYEEGPNSLINEEEFFDAVEAALDRQDKMEEQSQSEKVRLYWPISLPSGDAYSAVGTHRFVQKPYSRSSSMSSIDLVSAFDVHRFSTQVEEMVQNHMTYSLQDVGGDANWQLVVEEGEMKVYRREVEENGIVLDPLKATHAVKGVTGHEVCHYFWNVDVRNDWETTIENFHVVENLADNAIIVYQMHKRVWPASQRDVLYLSAIRKIPAFSENDPETWIVCNFSVEHDNAPLNNRCVRAKINIAMICQTLVSPPEGNKEINRDNILCKITYVANVNPGGWAPASVLRAVAKREYPKFLKRFTSYVQEKTAGKPILF
SIO_010081: LOC116780088
subclass of: SO_0000673
so part of: LOC116780088
location: join(621284..621379,623758..623892,662476..662592,701544..701651,702440..702578,704103..704186,711883..712040,732516..732608,735184..735270,736245..736337,736889..736963,741987..742082,746570..746702,746816..746886,748142..748270,748723..748852,750146..750273)
location: region:621284-750273:1
so has part: feature:621284-621379:1:exon
so has part: feature:623758-623892:1:exon
so has part: feature:662476-662592:1:exon
so has part: feature:701544-701651:1:exon
so has part: feature:702440-702578:1:exon
so has part: feature:704103-704186:1:exon
so has part: feature:711883-712040:1:exon
so has part: feature:732516-732608:1:exon
so has part: feature:735184-735270:1:exon
so has part: feature:736245-736337:1:exon
so has part: feature:736889-736963:1:exon
so has part: feature:741987-742082:1:exon
so has part: feature:746570-746702:1:exon
so has part: feature:746816-746886:1:exon
so has part: feature:748142-748270:1:exon
so has part: feature:748723-748852:1:exon
so has part: feature:750146-750273:1:exon

XP_032530462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:621284-621379:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623758-623892:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:662476-662592:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:701544-701651:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:702440-702578:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:704103-704186:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:711883-712040:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:732516-732608:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:735184-735270:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:736245-736337:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:736889-736963:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:741987-742082:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:746570-746702:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:746816-746886:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:748142-748270:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:748723-748852:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:750146-750273:1:exon

LOC116780088
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116780088
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide transfer protein-like isoform X1
translation: MSDNQSWNSSGSEEDPETEPGLPVELCGVLSKWTNYIHGWQDRWVVLKSNTLSYYKSEDETEYGCRGSICLSKAVITPHDFDECRFDISVNDSVWYLRAQDPTHRQQWVDAIEQHKTESGYASESSLRRHGSMVSLVSGASGYSATSTSSFKKGHSLHEKLAEMETFRDILCRQVDTLQKYFDACADAVSKDELQRDKVVEDDEDDFPVMRSDGDFSYNSNSSKEKLFPHVTPKGINGIDFKGEAITFKATTAGILATLSHCIELMVKREENWQKRLDKEIEKRRRIEEAYKTAVTELKKKSHFGGPDYEEGPNSLINEEEFFDAVEAALDRQDKMEEQSQSEKVRLYWPISLPSGDAYSAVGTHRFVQKVEEMVQNHMTYSLQDVGGDANWQLVVEEGEMKVYRREVEENGIVLDPLKATHAVKGVTGHEVCHYFWNVDVRNDWETTIENFHVVENLADNAIIVYQMHKRVWPASQRDVLYLSAIRKIPAFSENDPETWIVCNFSVEHDNAPLNNRCVRAKINIAMICQTLVSPPEGNKEINRDNILCKITYVANVNPGGWAPASVLRAVAKREYPKFLKRFTSYVQEKTAGKPILF
SIO_010081: LOC116780088
subclass of: SO_0000673
so part of: LOC116780088
location: join(621284..621379,623758..623892,662476..662592,701544..701651,702440..702578,704103..704186,711883..712040,732516..732608,735184..735270,736245..736337,741987..742082,746570..746702,746816..746886,748142..748270,748723..748852,750146..750273)
location: region:621284-750273:1
so has part: feature:621284-621379:1:exon
so has part: feature:623758-623892:1:exon
so has part: feature:662476-662592:1:exon
so has part: feature:701544-701651:1:exon
so has part: feature:702440-702578:1:exon
so has part: feature:704103-704186:1:exon
so has part: feature:711883-712040:1:exon
so has part: feature:732516-732608:1:exon
so has part: feature:735184-735270:1:exon
so has part: feature:736245-736337:1:exon
so has part: feature:741987-742082:1:exon
so has part: feature:746570-746702:1:exon
so has part: feature:746816-746886:1:exon
so has part: feature:748142-748270:1:exon
so has part: feature:748723-748852:1:exon
so has part: feature:750146-750273:1:exon

XP_032530461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:621284-621379:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623758-623892:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:662476-662592:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:701544-701651:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:702440-702578:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:704103-704186:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:711883-712040:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:732516-732608:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:735184-735270:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:736245-736337:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:741987-742082:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:746570-746702:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:746816-746886:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:748142-748270:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:748723-748852:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:750146-750273:1:exon

LOC116780092
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780092
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(797806..805533)
location: region:797806-805533:-1
so has part: feature:797806-805533:-1:exon
subclass of: SO_0000011

116780092
type: Gene
SIO_000068: ncbigene

position:797806:-1
position: 797806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:805533:-1
position: 805533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:797806-805533:-1:exon

LOC116780092
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780092
product: uncharacterized LOC116780092
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004354324.1
SIO_010081: LOC116780092
subclass of: SO_0000673
so part of: LOC116780092
location: complement(join(797806..797816,802659..802661,805443..805533))
location: region:797806-805533:-1
so has part: feature:805443-805533:-1:exon
so has part: feature:802659-802661:-1:exon
so has part: feature:797806-797816:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:805443-805533:-1:exon

position:805443:-1
position: 805443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:802659-802661:-1:exon

position:802659:-1
position: 802659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802661:-1
position: 802661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:797806-797816:-1:exon

position:797816:-1
position: 797816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116780091
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780091
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1042166..1064044)
location: region:1042166-1064044:-1
so has part: feature:1042166-1064044:-1:exon
subclass of: SO_0000011

116780091
type: Gene
SIO_000068: ncbigene

position:1042166:-1
position: 1042166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1064044:-1
position: 1064044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1042166-1064044:-1:exon

LOC116780091
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780091
product: uncharacterized LOC116780091
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004354323.1
SIO_010081: LOC116780091
subclass of: SO_0000673
so part of: LOC116780091
location: complement(join(1042166..1042177,1051852..1051863,1063926..1064044))
location: region:1042166-1064044:-1
so has part: feature:1063926-1064044:-1:exon
so has part: feature:1051852-1051863:-1:exon
so has part: feature:1042166-1042177:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1063926-1064044:-1:exon

position:1063926:-1
position: 1063926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1051852-1051863:-1:exon

position:1051852:-1
position: 1051852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1051863:-1
position: 1051863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1042166-1042177:-1:exon

position:1042177:-1
position: 1042177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116779963
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779963
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1074804..1078325)
location: region:1074804-1078325:-1
so has part: feature:1074804-1078325:-1:exon

116779963
type: Gene
SIO_000068: ncbigene

position:1074804:-1
position: 1074804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1078325:-1
position: 1078325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1074804-1078325:-1:exon

LOC116779963
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779963
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 23% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116779963
subclass of: SO_0000673
so part of: LOC116779963
location: complement(1074804..1075074)
location: region:1074804-1075074:-1
so has part: feature:1074804-1075074:-1:exon

position:1075074:-1
position: 1075074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1074804-1075074:-1:exon

LOC116779963
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779963
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 23% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116779963
subclass of: SO_0000673
so part of: LOC116779963
location: complement(1076013..1076091)
location: region:1076013-1076091:-1
so has part: feature:1076013-1076091:-1:exon

position:1076013:-1
position: 1076013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1076091:-1
position: 1076091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1076013-1076091:-1:exon

LOC116779963
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779963
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 23% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116779963
subclass of: SO_0000673
so part of: LOC116779963
location: complement(1076336..1078325)
location: region:1076336-1078325:-1
so has part: feature:1076336-1078325:-1:exon

position:1076336:-1
position: 1076336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1076336-1078325:-1:exon

LOC116780085
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780085
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1113626..1316445)
location: region:1113626-1316445:-1
so has part: feature:1113626-1316445:-1:exon
subclass of: SO_0000010

116780085
type: Gene
SIO_000068: ncbigene

position:1113626:-1
position: 1113626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1316445:-1
position: 1316445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1113626-1316445:-1:exon

LOC116780085
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116780085
product: E3 ubiquitin-protein ligase UHRF2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674568.1
SIO_010081: LOC116780085
subclass of: SO_0000673
so part of: LOC116780085
location: complement(join(1113626..1113772,1115391..1115489,1118473..1118633,1119010..1119133,1119956..1120093,1138965..1139127,1142520..1142626,1168866..1168970,1172364..1172471,1172810..1172933,1175936..1176122,1186764..1186873,1192586..1192804,1246947..1247209,1274170..1274412,1316293..1316445))
location: region:1113626-1316445:-1
so has part: feature:1316293-1316445:-1:exon
so has part: feature:1274170-1274412:-1:exon
so has part: feature:1246947-1247209:-1:exon
so has part: feature:1192586-1192804:-1:exon
so has part: feature:1186764-1186873:-1:exon
so has part: feature:1175936-1176122:-1:exon
so has part: feature:1172810-1172933:-1:exon
so has part: feature:1172364-1172471:-1:exon
so has part: feature:1168866-1168970:-1:exon
so has part: feature:1142520-1142626:-1:exon
so has part: feature:1138965-1139127:-1:exon
so has part: feature:1119956-1120093:-1:exon
so has part: feature:1119010-1119133:-1:exon
so has part: feature:1118473-1118633:-1:exon
so has part: feature:1115391-1115489:-1:exon
so has part: feature:1113626-1113772:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1316293-1316445:-1:exon

position:1316293:-1
position: 1316293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1274170-1274412:-1:exon

position:1274170:-1
position: 1274170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1274412:-1
position: 1274412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1246947-1247209:-1:exon

position:1246947:-1
position: 1246947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1247209:-1
position: 1247209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1192586-1192804:-1:exon

position:1192586:-1
position: 1192586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1192804:-1
position: 1192804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1186764-1186873:-1:exon

position:1186764:-1
position: 1186764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1186873:-1
position: 1186873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1175936-1176122:-1:exon

position:1175936:-1
position: 1175936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1176122:-1
position: 1176122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1172810-1172933:-1:exon

position:1172810:-1
position: 1172810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1172933:-1
position: 1172933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1172364-1172471:-1:exon

position:1172364:-1
position: 1172364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1172471:-1
position: 1172471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1168866-1168970:-1:exon

position:1168866:-1
position: 1168866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1168970:-1
position: 1168970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1142520-1142626:-1:exon

position:1142520:-1
position: 1142520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1142626:-1
position: 1142626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1138965-1139127:-1:exon

position:1138965:-1
position: 1138965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1139127:-1
position: 1139127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1119956-1120093:-1:exon

position:1119956:-1
position: 1119956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1120093:-1
position: 1120093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1119010-1119133:-1:exon

position:1119010:-1
position: 1119010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1119133:-1
position: 1119133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1118473-1118633:-1:exon

position:1118473:-1
position: 1118473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1118633:-1
position: 1118633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1115391-1115489:-1:exon

position:1115391:-1
position: 1115391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1115489:-1
position: 1115489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1113626-1113772:-1:exon

position:1113772:-1
position: 1113772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116780085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116780085
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase UHRF2-like
translation: MWIQVRTIDGTETHIIDDLSRLTKIECLREKIQKTFCVSPDRQRLFYRGKQLEDGHTLFDYDVGLNDIVQLLIRSESEAPTTSVTNQGGKVNPCAVSNCQNKVKREASNRSPNQPSTSTHLFLIDPGIGLYKINELVDARDVSIGAWFEAHIEYVTRATKGHKNGKAQVKSGDSYKRTNGNISQDHSSENANYLDSRPSTSYSDCMNTDEEAVYHIKYDEYPENGIVEMDTKNLRPRARTILKWSELKVGDVVMVNYNVEAPEERGFWFDAEITSLREISRTNKEVHAKILLGGPEDAINDCRIIFIEEVYKIEKPGAYPLTFGDGDFKRKSGPECKHCRADPDKECHFCSCYLCGGKQDAHMQLLCDECNMAYHIYCLNPPLSTIPEDEDWYCPSCKNDSNEVVKAGEKLKQSKKKAKMPSASTESQRDWGKGMACVGRTKECTIVPSNHYGPIPGVPVGTTWKFRVQVSEAGVHRPHVGGIHGRSNDGAYSLVLAGGFEDEVDRGDEFTYTGSGGRDLSGNKRIGEHSFDQTLTHMNRALALNCDAPLDDKNGAESKNWRAGKPVRVVRSSKGRRISKYAPEEGNRYDGIYKVVKYWPEIGKCGFLVWRYLLRRDDIEPAPWTSEGMERSKKLGLNIQYPEGYLEAMASKEKKNKVKKQSGKQEPTSQSNGNQKRTIDDGIEETKNTSKAMRMGDGGKGEAFQLTQQQQWLIKEDSMNQKLWDEVLASLKEGPNFLKKLEQSFMCVCCQELVYQPVTTECLHNVCKSCLQRSFRAEVFTCPACRYDLGKSYAMVPNKILQTLLDQFFPGYSKGR
SIO_010081: LOC116780085
subclass of: SO_0000673
so part of: LOC116780085
location: complement(join(1113626..1113772,1115391..1115489,1118473..1118633,1119010..1119133,1119956..1120093,1138965..1139127,1142520..1142626,1168866..1168970,1172364..1172471,1172810..1172933,1175936..1176122,1186764..1186873,1192586..1192804,1246947..1247209,1274170..1274412,1316293..1316445))
location: region:1113626-1316445:-1
so has part: feature:1316293-1316445:-1:exon
so has part: feature:1274170-1274412:-1:exon
so has part: feature:1246947-1247209:-1:exon
so has part: feature:1192586-1192804:-1:exon
so has part: feature:1186764-1186873:-1:exon
so has part: feature:1175936-1176122:-1:exon
so has part: feature:1172810-1172933:-1:exon
so has part: feature:1172364-1172471:-1:exon
so has part: feature:1168866-1168970:-1:exon
so has part: feature:1142520-1142626:-1:exon
so has part: feature:1138965-1139127:-1:exon
so has part: feature:1119956-1120093:-1:exon
so has part: feature:1119010-1119133:-1:exon
so has part: feature:1118473-1118633:-1:exon
so has part: feature:1115391-1115489:-1:exon
so has part: feature:1113626-1113772:-1:exon

XP_032530459.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1316293-1316445:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274170-1274412:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1246947-1247209:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1192586-1192804:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1186764-1186873:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1175936-1176122:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1172810-1172933:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1172364-1172471:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1168866-1168970:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1142520-1142626:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1138965-1139127:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1119956-1120093:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1119010-1119133:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1118473-1118633:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1115391-1115489:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1113626-1113772:-1:exon

LOC116780090
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780090
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1333354..1347796)
location: region:1333354-1347796:-1
so has part: feature:1333354-1347796:-1:exon
subclass of: SO_0000010

116780090
type: Gene
SIO_000068: ncbigene

position:1333354:-1
position: 1333354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1347796:-1
position: 1347796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1333354-1347796:-1:exon

LOC116780090
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116780090
product: syncytin-A-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032674575.1
SIO_010081: LOC116780090
subclass of: SO_0000673
so part of: LOC116780090
location: complement(join(1333354..1334875,1347614..1347796))
location: region:1333354-1347796:-1
so has part: feature:1347614-1347796:-1:exon
so has part: feature:1333354-1334875:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1347614-1347796:-1:exon

position:1347614:-1
position: 1347614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1333354-1334875:-1:exon

position:1334875:-1
position: 1334875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116780090
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116780090
product: syncytin-A-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032674574.1
SIO_010081: LOC116780090
subclass of: SO_0000673
so part of: LOC116780090
location: complement(join(1333354..1334889,1347614..1347796))
location: region:1333354-1347796:-1
so has part: feature:1347614-1347796:-1:exon
so has part: feature:1333354-1334889:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1347614-1347796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1333354-1334889:-1:exon

position:1334889:-1
position: 1334889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116780090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116780090
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syncytin-A-like
translation: MMKMWNRLLVLCILFVQPVTMNRVWDQKLHVALVQNVSKILRKTECWICTQVPAIDDENSEWPLIGILLNETNFGKSMMNFPGTWKPVTEAYYPVALSNVISNQDVVPCMIINATGEIILPPHCDKNNSKEEINPEIVAGMAQFPLRLIPPQGSGWYWICEKEAWKVLPLDKDRACALGAVIPNITILDPIDEQEWKKPYPKRAKRTSNPLIERPTIFHSIVRALVPSLGVSELEKAIVNISAVMENIQDHTLDAIETLKEQFQSLSRVVIQNRMALNFLLASQGGVCKVINTSCCSYIDQTGRINNDLVAIRNQTKILHQISLDDVSLGLGDVLHKLTSWLPNWTWMRQLFILVLYILSVSVIAHCMHRCYSCCRCR
SIO_010081: LOC116780090
subclass of: SO_0000673
so part of: LOC116780090
location: complement(1333483..1334619)
location: region:1333483-1334619:-1
so has part: feature:1333483-1334619:-1:exon

XP_032530465.1
type: Protein
SIO_000068: ncbiprotein

position:1333483:-1
position: 1333483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1334619:-1
position: 1334619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1333483-1334619:-1:exon

LOC116780090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116780090
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syncytin-A-like
translation: MMKMWNRLLVLCILFVQPVTMNRVWDQKLHVALVQNVSKILRKTECWICTQVPAIDDENSEWPLIGILLNETNFGKSMMNFPGTWKPVTEAYYPVALSNVISNQDVVPCMIINATGEIILPPHCDKNNSKEEINPEIVAGMAQFPLRLIPPQGSGWYWICEKEAWKVLPLDKDRACALGAVIPNITILDPIDEQEWKKPYPKRAKRTSNPLIERPTIFHSIVRALVPSLGVSELEKAIVNISAVMENIQDHTLDAIETLKEQFQSLSRVVIQNRMALNFLLASQGGVCKVINTSCCSYIDQTGRINNDLVAIRNQTKILHQISLDDVSLGLGDVLHKLTSWLPNWTWMRQLFILVLYILSVSVIAHCMHRCYSCCRCR
SIO_010081: LOC116780090
subclass of: SO_0000673
so part of: LOC116780090
location: complement(1333483..1334619)
location: region:1333483-1334619:-1
so has part: feature:1333483-1334619:-1:exon

XP_032530466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1333483-1334619:-1:exon

LOC116780089
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780089
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1344181..1345710
location: region:1344181-1345710:1
so has part: feature:1344181-1345710:1:exon
subclass of: SO_0000010

116780089
type: Gene
SIO_000068: ncbigene

position:1344181:1
position: 1344181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1345710:1
position: 1345710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1344181-1345710:1:exon

LOC116780089
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116780089
product: uncharacterized LOC116780089
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032674573.1
SIO_010081: LOC116780089
subclass of: SO_0000673
so part of: LOC116780089
location: join(1344181..1345390,1345624..1345710)
location: region:1344181-1345710:1
so has part: feature:1344181-1345390:1:exon
so has part: feature:1345624-1345710:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1344181-1345390:1:exon

position:1345390:1
position: 1345390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1345624-1345710:1:exon

position:1345624:1
position: 1345624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116780089
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116780089
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116780089
translation: MWQRGPEGPTRPIGFHSRSLKDAEKRYSAWEKGLFVVCLALQEAEKTIRHQSIILRGPFKVLKPVISGTPPPAGVAQRETVRRWYAQIDHYYHSRQITEGAPKILQIQEQSCKLPDSNPPPSCIKPAPTFEPHLKNVWFTDASARREGKVWKYRAVALHVDSGNRVVTEGEGSAQVGELVAVWSVFTREADTEGDTYIYTDSYAVFKGCTEWLPFWEQNQWEVNQVSVWQQEKWKEILNIARQKTFLVGWVAAHQTDNNPAHLLNNQVDSLTRLAKITIEGEGQNWERLLEWLHVKRDHSGNRDLFKEAISRGWPVTRELCNTVISACSLCRTRLKDHDPLKDPPLHLRDNKGLWDTWQVDYIGPFRISYGKQYILVGDQWAPKASHKTS
SIO_010081: LOC116780089
subclass of: SO_0000673
so part of: LOC116780089
location: join(1344256..1345390,1345624..1345661)
location: region:1344256-1345661:1
so has part: feature:1344256-1345390:1:exon
so has part: feature:1345624-1345661:1:exon

XP_032530464.1
type: Protein
SIO_000068: ncbiprotein

position:1344256:1
position: 1344256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1345661:1
position: 1345661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1344256-1345390:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1345624-1345661:1:exon

LOC116779965
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779965
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1487961..1492399)
location: region:1487961-1492399:-1
so has part: feature:1487961-1492399:-1:exon

116779965
type: Gene
SIO_000068: ncbigene

position:1487961:-1
position: 1487961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1492399:-1
position: 1492399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1487961-1492399:-1:exon

LOC116779965
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779965
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116779965
subclass of: SO_0000673
so part of: LOC116779965
location: complement(1487961..1487980)
location: region:1487961-1487980:-1
so has part: feature:1487961-1487980:-1:exon

position:1487980:-1
position: 1487980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1487961-1487980:-1:exon

LOC116779965
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779965
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116779965
subclass of: SO_0000673
so part of: LOC116779965
location: complement(1489038..1489191)
location: region:1489038-1489191:-1
so has part: feature:1489038-1489191:-1:exon

position:1489038:-1
position: 1489038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1489191:-1
position: 1489191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1489038-1489191:-1:exon

LOC116779965
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779965
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116779965
subclass of: SO_0000673
so part of: LOC116779965
location: complement(1490622..1490769)
location: region:1490622-1490769:-1
so has part: feature:1490622-1490769:-1:exon

position:1490622:-1
position: 1490622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1490769:-1
position: 1490769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1490622-1490769:-1:exon

LOC116779965
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779965
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116779965
subclass of: SO_0000673
so part of: LOC116779965
location: complement(1490868..1492399)
location: region:1490868-1492399:-1
so has part: feature:1490868-1492399:-1:exon

position:1490868:-1
position: 1490868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1490868-1492399:-1:exon

LOC116780087
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780087
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1594001..1696122
location: region:1594001-1696122:1
so has part: feature:1594001-1696122:1:exon
subclass of: SO_0000010

116780087
type: Gene
SIO_000068: ncbigene

position:1594001:1
position: 1594001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1696122:1
position: 1696122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1594001-1696122:1:exon

LOC116780087
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116780087
product: transcription factor RFX3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
transcript id: XM_032674569.1
SIO_010081: LOC116780087
subclass of: SO_0000673
so part of: LOC116780087
location: join(1594001..1594117,1603013..1603110,1628962..1629217,1646539..1646613,1652811..1652992,1653755..1653874,1665292..1665413,1668827..1668939,1669744..1669859,1670347..1670501,1686875..1686972,1687268..1687417,1691980..1692188,1693190..1693343,1695388..1695430,1695881..1696122)
location: region:1594001-1696122:1
so has part: feature:1594001-1594117:1:exon
so has part: feature:1603013-1603110:1:exon
so has part: feature:1628962-1629217:1:exon
so has part: feature:1646539-1646613:1:exon
so has part: feature:1652811-1652992:1:exon
so has part: feature:1653755-1653874:1:exon
so has part: feature:1665292-1665413:1:exon
so has part: feature:1668827-1668939:1:exon
so has part: feature:1669744-1669859:1:exon
so has part: feature:1670347-1670501:1:exon
so has part: feature:1686875-1686972:1:exon
so has part: feature:1687268-1687417:1:exon
so has part: feature:1691980-1692188:1:exon
so has part: feature:1693190-1693343:1:exon
so has part: feature:1695388-1695430:1:exon
so has part: feature:1695881-1696122:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1594001-1594117:1:exon

position:1594117:1
position: 1594117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1603013-1603110:1:exon

position:1603013:1
position: 1603013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1603110:1
position: 1603110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1628962-1629217:1:exon

position:1628962:1
position: 1628962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1629217:1
position: 1629217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1646539-1646613:1:exon

position:1646539:1
position: 1646539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1646613:1
position: 1646613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1652811-1652992:1:exon

position:1652811:1
position: 1652811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1652992:1
position: 1652992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1653755-1653874:1:exon

position:1653755:1
position: 1653755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1653874:1
position: 1653874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1665292-1665413:1:exon

position:1665292:1
position: 1665292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1665413:1
position: 1665413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1668827-1668939:1:exon

position:1668827:1
position: 1668827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1668939:1
position: 1668939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1669744-1669859:1:exon

position:1669744:1
position: 1669744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1669859:1
position: 1669859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1670347-1670501:1:exon

position:1670347:1
position: 1670347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1670501:1
position: 1670501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1686875-1686972:1:exon

position:1686875:1
position: 1686875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1686972:1
position: 1686972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1687268-1687417:1:exon

position:1687268:1
position: 1687268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1687417:1
position: 1687417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1691980-1692188:1:exon

position:1691980:1
position: 1691980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1692188:1
position: 1692188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1693190-1693343:1:exon

position:1693190:1
position: 1693190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1693343:1
position: 1693343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1695388-1695430:1:exon

position:1695388:1
position: 1695388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1695430:1
position: 1695430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1695881-1696122:1:exon

position:1695881:1
position: 1695881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116780087
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116780087
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor RFX3-like
translation: MQTSETGSDTGSTVTLQASVAGQAAVPTQVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYVEGSDTVYTNGTIRTTYPYTETQMYSQNTGGNYFDTQGSSAQATTVVSSHSMVGTGGIQMGVAGGQLISSSGGTYLIGNSMENSGHSVTHTTRSSPATIEMAIETLQKSDGLSTHRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRRLGTRGNSKYHYYGIRVKPDSPLNQLQEDMQYMAMRQQPMQQKQRYKPVQKVDGVADGFTGSGQQTGTSAEQTIIAQSQHHQQFLDASRVLPEFGELEISSLPDGTTLEDIKSLQSLYREHCEAIVDVIVNLQFSLIEKLWQTFWRFSPSAPADDTVIIELSNLSEIENRLPKGKLIVLCKNESILKWMGNCDHVMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSSAMINIPQRMIQTKIASVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGRPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIAVMGEFGDLNAISPGNMDKDEGSEVESEIEEEMDENGEPQAKREKTDLNQAFQAGCMQQPVLESGVEQSLLNPLHNEHIVTNTQTIRQCSATGNTYTAV
SIO_010081: LOC116780087
subclass of: SO_0000673
so part of: LOC116780087
location: join(1594001..1594117,1603013..1603110,1628962..1629217,1646539..1646613,1652811..1652992,1653755..1653874,1665292..1665413,1668827..1668939,1669744..1669859,1670347..1670501,1686875..1686972,1687268..1687417,1691980..1692188,1693190..1693343,1695388..1695430,1695881..1696122)
location: region:1594001-1696122:1
so has part: feature:1594001-1594117:1:exon
so has part: feature:1603013-1603110:1:exon
so has part: feature:1628962-1629217:1:exon
so has part: feature:1646539-1646613:1:exon
so has part: feature:1652811-1652992:1:exon
so has part: feature:1653755-1653874:1:exon
so has part: feature:1665292-1665413:1:exon
so has part: feature:1668827-1668939:1:exon
so has part: feature:1669744-1669859:1:exon
so has part: feature:1670347-1670501:1:exon
so has part: feature:1686875-1686972:1:exon
so has part: feature:1687268-1687417:1:exon
so has part: feature:1691980-1692188:1:exon
so has part: feature:1693190-1693343:1:exon
so has part: feature:1695388-1695430:1:exon
so has part: feature:1695881-1696122:1:exon

XP_032530460.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1594001-1594117:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1603013-1603110:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1628962-1629217:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1646539-1646613:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1652811-1652992:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1653755-1653874:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1665292-1665413:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1668827-1668939:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1669744-1669859:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1670347-1670501:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1686875-1686972:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1687268-1687417:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1691980-1692188:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1693190-1693343:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1695388-1695430:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1695881-1696122:1:exon

LOC116780083
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780083
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1772434..1923834
location: region:1772434-1923834:1
so has part: feature:1772434-1923834:1:exon
subclass of: SO_0000010

116780083
type: Gene
SIO_000068: ncbigene

position:1772434:1
position: 1772434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1923834:1
position: 1923834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1772434-1923834:1:exon

LOC116780083
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116780083
product: protein patched homolog 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
transcript id: XM_032674566.1
SIO_010081: LOC116780083
subclass of: SO_0000673
so part of: LOC116780083
location: join(1772434..1772625,1774211..1774403,1844521..1844710,1845975..1846044,1846159..1846250,1847325..1847523,1848114..1848235,1849653..1849800,1851695..1851826,1852465..1852620,1853144..1853242,1854125..1854250,1868310..1868428,1870245..1870644,1871050..1871365,1885954..1886096,1888212..1888395,1889358..1889638,1891205..1891342,1911631..1911773,1914626..1914725,1922150..1922395,1923307..1923834)
location: region:1772434-1923834:1
so has part: feature:1772434-1772625:1:exon
so has part: feature:1774211-1774403:1:exon
so has part: feature:1844521-1844710:1:exon
so has part: feature:1845975-1846044:1:exon
so has part: feature:1846159-1846250:1:exon
so has part: feature:1847325-1847523:1:exon
so has part: feature:1848114-1848235:1:exon
so has part: feature:1849653-1849800:1:exon
so has part: feature:1851695-1851826:1:exon
so has part: feature:1852465-1852620:1:exon
so has part: feature:1853144-1853242:1:exon
so has part: feature:1854125-1854250:1:exon
so has part: feature:1868310-1868428:1:exon
so has part: feature:1870245-1870644:1:exon
so has part: feature:1871050-1871365:1:exon
so has part: feature:1885954-1886096:1:exon
so has part: feature:1888212-1888395:1:exon
so has part: feature:1889358-1889638:1:exon
so has part: feature:1891205-1891342:1:exon
so has part: feature:1911631-1911773:1:exon
so has part: feature:1914626-1914725:1:exon
so has part: feature:1922150-1922395:1:exon
so has part: feature:1923307-1923834:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1772434-1772625:1:exon

position:1772625:1
position: 1772625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1774211-1774403:1:exon

position:1774211:1
position: 1774211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1774403:1
position: 1774403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1844521-1844710:1:exon

position:1844521:1
position: 1844521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1844710:1
position: 1844710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1845975-1846044:1:exon

position:1845975:1
position: 1845975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1846044:1
position: 1846044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1846159-1846250:1:exon

position:1846159:1
position: 1846159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1846250:1
position: 1846250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1847325-1847523:1:exon

position:1847325:1
position: 1847325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1847523:1
position: 1847523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1848114-1848235:1:exon

position:1848114:1
position: 1848114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1848235:1
position: 1848235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1849653-1849800:1:exon

position:1849653:1
position: 1849653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1849800:1
position: 1849800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1851695-1851826:1:exon

position:1851695:1
position: 1851695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1851826:1
position: 1851826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1852465-1852620:1:exon

position:1852465:1
position: 1852465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1852620:1
position: 1852620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1853144-1853242:1:exon

position:1853144:1
position: 1853144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1853242:1
position: 1853242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1854125-1854250:1:exon

position:1854125:1
position: 1854125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1854250:1
position: 1854250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1868310-1868428:1:exon

position:1868310:1
position: 1868310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1868428:1
position: 1868428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1870245-1870644:1:exon

position:1870245:1
position: 1870245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1870644:1
position: 1870644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1871050-1871365:1:exon

position:1871050:1
position: 1871050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1871365:1
position: 1871365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1885954-1886096:1:exon

position:1885954:1
position: 1885954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1886096:1
position: 1886096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1888212-1888395:1:exon

position:1888212:1
position: 1888212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1888395:1
position: 1888395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1889358-1889638:1:exon

position:1889358:1
position: 1889358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1889638:1
position: 1889638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1891205-1891342:1:exon

position:1891205:1
position: 1891205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1891342:1
position: 1891342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1911631-1911773:1:exon

position:1911631:1
position: 1911631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1911773:1
position: 1911773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1914626-1914725:1:exon

position:1914626:1
position: 1914626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1914725:1
position: 1914725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1922150-1922395:1:exon

position:1922150:1
position: 1922150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1922395:1
position: 1922395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1923307-1923834:1:exon

position:1923307:1
position: 1923307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116780083
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116780083
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein patched homolog 1-like
translation: MFNPQLMIQTPHEDGANILTIEALRQHLDSALQASRVDVYMYNRKWKLEHLCYKSGELITEAGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTAYLLGKPPFQWINFDPLEFLEKLKKINYQVESWEEMLKKAEVGHGYMDRPCLNPADPDCPITAPNKNSTKPLDVALVLSGGCYGLSRKYMHWQEELIIGGTVKNSSGKLVSAQALQTMFQLMTPKQMYEHFKGYEYVSHINWSEDKAAAILEAWQRMYVEVVHQSVAQNSTQKVLSFTTTTLDDILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCAKSQGAVGLAGIFLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDIFLLVHAFSETGQNKRIPFEDRTGECLKRTGAGVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFVMVLLIFPAILSMDLYRREDRRLDIFCCFTSPCATRVIQIEPQAYVENRDNTCYSRPPYSSQSFVHETQITMQSTVQLHTEYDPHAQVYYTTAEPCSAISVQPVTVTQDNISCQSPESTNSTRDLLSQFSDSSMHCLEPPCTKWTLSSFSEKHYAPFLLKPKAKIVVIFLFLGLLGLSLYGTTQARDGLNLTDIVPQETQDYDFIAAQFKYFSFYNIYIVTQKADYPSPHVQHLLYELHKSFSNVTYILLEEDKQLPKMWLHYFRDWLQGLQRAFDSDWEAGKITYNNYKNGSDDAVLAYKLLVQTGNRAKPIDISQLTKQRLVDADGIINPNAFYIYLTAWVNNDPVAYAASQANIRPPHPEWVHDKADYMPETRLRIPAAEPIEYAQFPFYLNGLHETSDFVEAIKKVRAICNNYAGLGIASYPNGYPFLFWEQYIGLRHWLLLSITVVLACTFLVCALFLLNPWTSGIIVVVLALMTVELFGMMGLIGIKLSAVSVVILVASVGIGVEFTVHIALAFLTAVGDKNRRVVLALEHMFAPVLDGAVSTLFGVLMLAGSEFDFIVRYFFAVLTILTILGVLNGLVLLPVLLSLFGPYPEVSPASRRNKLPTSSSEPLPSIVRFALPLGHINNGSDSSDSESSSQNASISEEHQYEAIQGSGAPVHQVIVEATENPVFARSTVVQSETRYQSSPRIQLNPVSGIQHSQHQGRQPKWETREGMQSPPHCHCRDTFEISAEQLSGPSNRGCSSHKTCSYNMRNPVFVAMSGSEPTYCQSITTVTASASVTVAVHSVTHNHNSWGGSFPSYEGYYEAGHRPFEDPHVPFDMWYERRNSKVQAIELQDVECEERIPDNNSE
SIO_010081: LOC116780083
subclass of: SO_0000673
so part of: LOC116780083
location: join(1844580..1844710,1845975..1846044,1846159..1846250,1847325..1847523,1848114..1848235,1849653..1849800,1851695..1851826,1852465..1852620,1853144..1853242,1854125..1854250,1868310..1868428,1870245..1870644,1871050..1871365,1885954..1886096,1888212..1888395,1889358..1889638,1891205..1891342,1911631..1911773,1914626..1914725,1922150..1922395,1923307..1923834)
location: region:1844580-1923834:1
so has part: feature:1844580-1844710:1:exon
so has part: feature:1845975-1846044:1:exon
so has part: feature:1846159-1846250:1:exon
so has part: feature:1847325-1847523:1:exon
so has part: feature:1848114-1848235:1:exon
so has part: feature:1849653-1849800:1:exon
so has part: feature:1851695-1851826:1:exon
so has part: feature:1852465-1852620:1:exon
so has part: feature:1853144-1853242:1:exon
so has part: feature:1854125-1854250:1:exon
so has part: feature:1868310-1868428:1:exon
so has part: feature:1870245-1870644:1:exon
so has part: feature:1871050-1871365:1:exon
so has part: feature:1885954-1886096:1:exon
so has part: feature:1888212-1888395:1:exon
so has part: feature:1889358-1889638:1:exon
so has part: feature:1891205-1891342:1:exon
so has part: feature:1911631-1911773:1:exon
so has part: feature:1914626-1914725:1:exon
so has part: feature:1922150-1922395:1:exon
so has part: feature:1923307-1923834:1:exon

XP_032530457.1
type: Protein
SIO_000068: ncbiprotein

position:1844580:1
position: 1844580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1844580-1844710:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1845975-1846044:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1846159-1846250:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1847325-1847523:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1848114-1848235:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1849653-1849800:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1851695-1851826:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1852465-1852620:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1853144-1853242:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1854125-1854250:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1868310-1868428:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1870245-1870644:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1871050-1871365:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1885954-1886096:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1888212-1888395:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1889358-1889638:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1891205-1891342:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1911631-1911773:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1914626-1914725:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1922150-1922395:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1923307-1923834:1:exon

LOC116779966
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779966
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2094119..2104114
location: region:2094119-2104114:1
so has part: feature:2094119-2104114:1:exon
subclass of: SO_0000010

116779966
type: Gene
SIO_000068: ncbigene

position:2094119:1
position: 2094119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2104114:1
position: 2104114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2094119-2104114:1:exon

LOC116779966
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779966
product: uncharacterized LOC116779966
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 32% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674474.1
SIO_010081: LOC116779966
subclass of: SO_0000673
so part of: LOC116779966
location: join(2094119..2094161,2094823..2097116,2103908..2104114)
location: region:2094119-2104114:1
so has part: feature:2094119-2094161:1:exon
so has part: feature:2094823-2097116:1:exon
so has part: feature:2103908-2104114:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2094119-2094161:1:exon

position:2094161:1
position: 2094161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2094823-2097116:1:exon

position:2094823:1
position: 2094823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2097116:1
position: 2097116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2103908-2104114:1:exon

position:2103908:1
position: 2103908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116779966
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779966
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:2095653..2095655,aa:OTHER)
product: LOW QUALITY PROTEIN: uncharacterized protein LOC116779966
translation: MWDTKNTKLVKVILIVLEVEGEPTEFRIDTGASFSAMNKLMGPLSDSTAWVVGVSGQIEEKTFLRPLDIKFRGKELDHQFLYMPNSPECLLGRDLLSALQAKIIFEKGRVKIEIPEENLAKIFVVKEVEKEEIPQEIEQAVVPWVWETGVPGKSKAATPVRIELKEGTQPVRVRQYPISLEARKGIAPMISQFLILGILKECESEFNTPIFPVRKPNGKYRLVQDLRAVNLITKDIHPVVANPYTLLTSVSERFQWFTVIDLKDAFFCIPLAPESWKIFAFEWENPETGRKXQLTWTRLPQGFKCSPTIFGNQLAKELEEWKTTQVKESPFSYIILQYVDDIFLGATEQGLCRQLTIELLNMLGQAGYRVSKEKAQLVKQKVIYLGCEISQGVRRLGANRIQAICAIPVPRNNQELRSFLGMVGWCRLWIPSFGLTARPLYEAVKEPKLTWGTKQEKAFQELKRALQEAPALGLPDLTKEFQLYVCERQRTALGVLTQQLGSWKRPVGYFSKRLDAVSGGWPGCLRAVAATVILIQEARKLTLGKHMVVYVPHMVITFLEQKGGHWLSSSRMLQYQALLREQDDVELKITNHLNPAEFLRSTEEEGVLEHDCVETIEQVYASRKDLKDEPLTDPDWELYTDGSSFVENGTRYAGYAVVTLQQVIEANALPPGTSAQKAEIWALVRALILSQGRRVNIWTDSKYAFGVVHVHGALWKERGLLTSQGTSIKHREEILQLLEAIHKPSAVAIMHVRGHQTDPGREFQGNRQADQAAKQAAREIPSYGEIVQKGSRAELKGAGAGPEITERGRGQPSGPGKMNAVLASRQCISRTIGDDGCGVKVLLMDRE
SIO_010081: LOC116779966
subclass of: SO_0000673
so part of: LOC116779966
location: join(2094119..2094161,2094823..2097116,2103908..2104114)
location: region:2094119-2104114:1
so has part: feature:2094119-2094161:1:exon
so has part: feature:2094823-2097116:1:exon
so has part: feature:2103908-2104114:1:exon

XP_032530365.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2094119-2094161:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2094823-2097116:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2103908-2104114:1:exon

LOC116779967
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779967
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2264808..2271292
location: region:2264808-2271292:1
so has part: feature:2264808-2271292:1:exon
subclass of: SO_0000010

116779967
type: Gene
SIO_000068: ncbigene

position:2264808:1
position: 2264808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2271292:1
position: 2271292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2264808-2271292:1:exon

LOC116779967
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779967
product: uncharacterized LOC116779967
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 7% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674475.1
SIO_010081: LOC116779967
subclass of: SO_0000673
so part of: LOC116779967
location: join(2264808..2265140,2267502..2268068,2268561..2268821,2271227..2271292)
location: region:2264808-2271292:1
so has part: feature:2264808-2265140:1:exon
so has part: feature:2267502-2268068:1:exon
so has part: feature:2268561-2268821:1:exon
so has part: feature:2271227-2271292:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2264808-2265140:1:exon

position:2265140:1
position: 2265140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2267502-2268068:1:exon

position:2267502:1
position: 2267502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2268068:1
position: 2268068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2268561-2268821:1:exon

position:2268561:1
position: 2268561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2268821:1
position: 2268821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2271227-2271292:1:exon

position:2271227:1
position: 2271227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116779967
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779967
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116779967
translation: MPRPRDEKESNLLESGRDEKESTPQESKRDEKESSLPELGRKRTESSLQKSERDREESNSQKPGRDEKEKDKKDKDEIDTENLEDDPEEGTSHSYYTRVAERKVKDKEGGKTYRLVQDLRTVNEITKTLHPVVANPYTLLTKLKDSLIWFTVLDLKDEFFCLTLATESQKIFAFEWESVNKGRKTQLTWTVLPQVYKSSLTLFGNQLAKELEQWEWPQGDGTLLQYVDDLLITTETEEECVKWTISLLNFLGLNGYRVSQQKVQLVQEKVVYLGYEISRGQRSLGTTRKEVICQMPRPETYQAVLAESDDVTIQVTNIVNPTSFLEGRVPAEPIENDCLETIEAVYSSCPDLKEEPFKDTDNCFSDGSSFMKQGVRVVSYAVTTTEQDTFSTRLQNPSEDGTPLGALG
SIO_010081: LOC116779967
subclass of: SO_0000673
so part of: LOC116779967
location: join(2264808..2265140,2267502..2268068,2268561..2268821,2271227..2271292)
location: region:2264808-2271292:1
so has part: feature:2264808-2265140:1:exon
so has part: feature:2267502-2268068:1:exon
so has part: feature:2268561-2268821:1:exon
so has part: feature:2271227-2271292:1:exon

XP_032530366.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2264808-2265140:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2267502-2268068:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2268561-2268821:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2271227-2271292:1:exon

LOC116779968
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779968
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2290935..2360712
location: region:2290935-2360712:1
so has part: feature:2290935-2360712:1:exon
subclass of: SO_0000010

116779968
type: Gene
SIO_000068: ncbigene

position:2290935:1
position: 2290935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2360712:1
position: 2360712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2290935-2360712:1:exon

LOC116779968
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779968
product: splicing regulatory glutamine/lysine-rich protein 1-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 39% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674476.1
SIO_010081: LOC116779968
subclass of: SO_0000673
so part of: LOC116779968
location: join(2290935..2291095,2301087..2301220,2308718..2308833,2312012..2312176,2313140..2313318,2313846..2313976,2315325..2315439,2341065..2341184,2343862..2344107,2344259..2344354,2358303..2358397,2359102..2359254,2360560..2360712)
location: region:2290935-2360712:1
so has part: feature:2290935-2291095:1:exon
so has part: feature:2301087-2301220:1:exon
so has part: feature:2308718-2308833:1:exon
so has part: feature:2312012-2312176:1:exon
so has part: feature:2313140-2313318:1:exon
so has part: feature:2313846-2313976:1:exon
so has part: feature:2315325-2315439:1:exon
so has part: feature:2341065-2341184:1:exon
so has part: feature:2343862-2344107:1:exon
so has part: feature:2344259-2344354:1:exon
so has part: feature:2358303-2358397:1:exon
so has part: feature:2359102-2359254:1:exon
so has part: feature:2360560-2360712:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2290935-2291095:1:exon

position:2291095:1
position: 2291095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2301087-2301220:1:exon

position:2301087:1
position: 2301087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2301220:1
position: 2301220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2308718-2308833:1:exon

position:2308718:1
position: 2308718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2308833:1
position: 2308833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2312012-2312176:1:exon

position:2312012:1
position: 2312012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2312176:1
position: 2312176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2313140-2313318:1:exon

position:2313140:1
position: 2313140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2313318:1
position: 2313318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2313846-2313976:1:exon

position:2313846:1
position: 2313846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2313976:1
position: 2313976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2315325-2315439:1:exon

position:2315325:1
position: 2315325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2315439:1
position: 2315439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2341065-2341184:1:exon

position:2341065:1
position: 2341065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2341184:1
position: 2341184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2343862-2344107:1:exon

position:2343862:1
position: 2343862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2344107:1
position: 2344107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2344259-2344354:1:exon

position:2344259:1
position: 2344259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2344354:1
position: 2344354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2358303-2358397:1:exon

position:2358303:1
position: 2358303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2358397:1
position: 2358397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2359102-2359254:1:exon

position:2359102:1
position: 2359102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2359254:1
position: 2359254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2360560-2360712:1:exon

position:2360560:1
position: 2360560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116779968
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779968
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:2344054..2344056,aa:OTHER)
product: LOW QUALITY PROTEIN: splicing regulatory glutamine/lysine-rich protein 1-like
translation: MMSSGGIGVPLGFPLGPTSVIQVTNVSSAVTSEQMRTLFGFLGNIEELRLYPPDNAPLTFSSKVCYIKFREASSVGVAQHLTNTVFIDRALIVVPCAEGKIPDEAKALSLLAPAPTMANLMPGAGLLPIPTPTPLTTLGVSLGTLGAIPAATLDPNITTLGEIPQPPIMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESRKSSETKGGRSRSHSRSESRSSSKSRSRRKRSHSKHRSRSGNRSLSRHKDRRRSRSPLKKRSRSRERWKSRSRSYSRKGERTETREERNWDMRQKGKERDKERNRDKDKRRTGERERAHKDRERVRDKXRDRDKDRDRDRVXERQDRDRDKGRKGQDMEKIEEKNRDMIKRRKRRDPTPPKNYSSHQISRSSSRERRKRKSRSLSKSPKTTKKKSSQTPSPTSKYFLKRNKKEKKREKEKXNERREREYSTSKKKISKEKEGKEKSDKSTTTLKDKDHTEEDLNSETDKEVDNSDTERTDEIKLQQNGNCQPNDENLSVKMEEF
SIO_010081: LOC116779968
subclass of: SO_0000673
so part of: LOC116779968
location: join(2290935..2291095,2301087..2301220,2308718..2308833,2312012..2312176,2313140..2313318,2313846..2313976,2315325..2315439,2341065..2341184,2343862..2344107,2344259..2344354,2358303..2358397,2359102..2359254,2360560..2360712)
location: region:2290935-2360712:1
so has part: feature:2290935-2291095:1:exon
so has part: feature:2301087-2301220:1:exon
so has part: feature:2308718-2308833:1:exon
so has part: feature:2312012-2312176:1:exon
so has part: feature:2313140-2313318:1:exon
so has part: feature:2313846-2313976:1:exon
so has part: feature:2315325-2315439:1:exon
so has part: feature:2341065-2341184:1:exon
so has part: feature:2343862-2344107:1:exon
so has part: feature:2344259-2344354:1:exon
so has part: feature:2358303-2358397:1:exon
so has part: feature:2359102-2359254:1:exon
so has part: feature:2360560-2360712:1:exon

XP_032530367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2290935-2291095:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2301087-2301220:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2308718-2308833:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2312012-2312176:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2313140-2313318:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2313846-2313976:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2315325-2315439:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2341065-2341184:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2343862-2344107:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2344259-2344354:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2358303-2358397:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2359102-2359254:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2360560-2360712:1:exon

LOC116779999
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779999
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2553572..2641745)
location: region:2553572-2641745:-1
so has part: feature:2553572-2641745:-1:exon
subclass of: SO_0000010

116779999
type: Gene
SIO_000068: ncbigene

position:2553572:-1
position: 2553572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2641745:-1
position: 2641745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2553572-2641745:-1:exon

LOC116779999
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779999
product: geranylgeranyl transferase type-1 subunit beta-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 25% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674518.1
SIO_010081: LOC116779999
subclass of: SO_0000673
so part of: LOC116779999
location: complement(join(2553572..2553753,2560930..2561038,2561308..2561492,2577450..2577495,2578178..2578310,2580699..2580850,2619991..2620058,2641627..2641745))
location: region:2553572-2641745:-1
so has part: feature:2641627-2641745:-1:exon
so has part: feature:2619991-2620058:-1:exon
so has part: feature:2580699-2580850:-1:exon
so has part: feature:2578178-2578310:-1:exon
so has part: feature:2577450-2577495:-1:exon
so has part: feature:2561308-2561492:-1:exon
so has part: feature:2560930-2561038:-1:exon
so has part: feature:2553572-2553753:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2641627-2641745:-1:exon

position:2641627:-1
position: 2641627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2619991-2620058:-1:exon

position:2619991:-1
position: 2619991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2620058:-1
position: 2620058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2580699-2580850:-1:exon

position:2580699:-1
position: 2580699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2580850:-1
position: 2580850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2578178-2578310:-1:exon

position:2578178:-1
position: 2578178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2578310:-1
position: 2578310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2577450-2577495:-1:exon

position:2577450:-1
position: 2577450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2577495:-1
position: 2577495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2561308-2561492:-1:exon

position:2561308:-1
position: 2561308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2561492:-1
position: 2561492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2560930-2561038:-1:exon

position:2560930:-1
position: 2560930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2561038:-1
position: 2561038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2553572-2553753:-1:exon

position:2553753:-1
position: 2553753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116779999
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779999
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: geranylgeranyl transferase type-1 subunit beta-like
translation: MLDSLDVVNKDDIIEWIYSLQVLPTEDNSNLNRCGFRGSSYLGMPFNPSKGPGMFHPYDSGHIAMTYTGLSCLVILGDDLSRVNKDALLAGLRALQLEDGSFCAVLEGSENDMRFVYCASCICYMLDNWSGMDTKKAVDYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVFSEKELNRIRRWCIMRQQNGYHGRPNKPVDTCYSFWVGATLKLLNIFQYTNFERNRNYILSTQDHLVGGFAKWPDSHPDALHAYFGICGLSLIGETGICKVHPALNISTRTSDHLHHLHQIWKTRTLKEYSGDTHIST
SIO_010081: LOC116779999
subclass of: SO_0000673
so part of: LOC116779999
location: complement(join(2553572..2553753,2560930..2561038,2561308..2561492,2577450..2577495,2578178..2578310,2580699..2580850,2619991..2620058,2641627..2641708))
location: region:2553572-2641708:-1
so has part: feature:2641627-2641708:-1:exon
so has part: feature:2619991-2620058:-1:exon
so has part: feature:2580699-2580850:-1:exon
so has part: feature:2578178-2578310:-1:exon
so has part: feature:2577450-2577495:-1:exon
so has part: feature:2561308-2561492:-1:exon
so has part: feature:2560930-2561038:-1:exon
so has part: feature:2553572-2553753:-1:exon

XP_032530409.1
type: Protein
SIO_000068: ncbiprotein

position:2641708:-1
position: 2641708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2641627-2641708:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2619991-2620058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2580699-2580850:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2578178-2578310:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2577450-2577495:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2561308-2561492:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2560930-2561038:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2553572-2553753:-1:exon

LOC116779969
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779969
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2646688..2648125
location: region:2646688-2648125:1
so has part: feature:2646688-2648125:1:exon
subclass of: SO_0000010

116779969
type: Gene
SIO_000068: ncbigene

position:2646688:1
position: 2646688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2648125:1
position: 2648125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2646688-2648125:1:exon

LOC116779969
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779969
product: sentrin-specific protease 5-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674477.1
SIO_010081: LOC116779969
subclass of: SO_0000673
so part of: LOC116779969
location: join(2646688..2646814,2647246..2648125)
location: region:2646688-2648125:1
so has part: feature:2646688-2646814:1:exon
so has part: feature:2647246-2648125:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2646688-2646814:1:exon

position:2646814:1
position: 2646814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2647246-2648125:1:exon

position:2647246:1
position: 2647246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116779969
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779969
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: sentrin-specific protease 5-like
translation: MINTVIKQEPVLDNYTQNMMPHHANLSCTTTTLDLTDSTITFNEFIKKYGSLIPLCEKDVLKRLKEVFNEDLSQRKPFITREIMKYQEKHPKPSTYNFQVSYNKHILDMDDLTTLEGQNWLNDQIINMYGELIMDAVPEKVHFFNSFFHRQFVTKGYNGVKRWTKKVDLFKKTLFLIPIHLEVHWSLIVVNVTSQIISFYDSQGIHFQFCVENIQWYLLTFSQEKNHPEFLQGWQTAVTKCIPQQKNDSDCGVFVLQYCKCLTLDQPFQLSQEDMPQVRKRIYRELCEH
SIO_010081: LOC116779969
subclass of: SO_0000673
so part of: LOC116779969
location: join(2646688..2646814,2647246..2647989)
location: region:2646688-2647989:1
so has part: feature:2646688-2646814:1:exon
so has part: feature:2647246-2647989:1:exon

XP_032530368.1
type: Protein
SIO_000068: ncbiprotein

position:2647989:1
position: 2647989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2646688-2646814:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2647246-2647989:1:exon

LOC116780009
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780009
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2933324..3826435
location: region:2933324-3826435:1
so has part: feature:2933324-3826435:1:exon
subclass of: SO_0000011

116780009
type: Gene
SIO_000068: ncbigene

position:2933324:1
position: 2933324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3826435:1
position: 3826435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2933324-3826435:1:exon

LOC116780009
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780009
product: uncharacterized LOC116780009
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004354282.1
SIO_010081: LOC116780009
subclass of: SO_0000673
so part of: LOC116780009
location: join(2933324..2933377,3543704..3543716,3826355..3826435)
location: region:2933324-3826435:1
so has part: feature:2933324-2933377:1:exon
so has part: feature:3543704-3543716:1:exon
so has part: feature:3826355-3826435:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2933324-2933377:1:exon

position:2933377:1
position: 2933377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3543704-3543716:1:exon

position:3543704:1
position: 3543704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3543716:1
position: 3543716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3826355-3826435:1:exon

position:3826355:1
position: 3826355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRNAD-AUC
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: TRNAD-AUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(3200444..3200515)
location: region:3200444-3200515:-1
so has part: feature:3200444-3200515:-1:exon
subclass of: SO_0000663

116780100
type: Gene
SIO_000068: ncbigene

position:3200444:-1
position: 3200444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3200515:-1
position: 3200515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3200444-3200515:-1:exon

TRNAD-AUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 296741
gene: TRNAD-AUC
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA aspartic acid (anticodon AUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(3200480..3200482),aa:Asp, seq:atc)
SIO_010081: TRNAD-AUC
subclass of: SO_0000673
so part of: TRNAD-AUC
location: complement(3200444..3200515)
location: region:3200444-3200515:-1
so has part: feature:3200444-3200515:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3200444-3200515:-1:exon

LOC116779995
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779995
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3228314..3247030)
location: region:3228314-3247030:-1
so has part: feature:3228314-3247030:-1:exon
subclass of: SO_0000010

116779995
type: Gene
SIO_000068: ncbigene

position:3228314:-1
position: 3228314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3247030:-1
position: 3247030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3228314-3247030:-1:exon

LOC116779995
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779995
product: tropomyosin beta chain-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 28% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674506.1
SIO_010081: LOC116779995
subclass of: SO_0000673
so part of: LOC116779995
location: complement(join(3228314..3228396,3231423..3231492,3232771..3232833,3232963..3233038,3233769..3233839,3233976..3234093,3235135..3235268,3246033..3246158,3246917..3247030))
location: region:3228314-3247030:-1
so has part: feature:3246917-3247030:-1:exon
so has part: feature:3246033-3246158:-1:exon
so has part: feature:3235135-3235268:-1:exon
so has part: feature:3233976-3234093:-1:exon
so has part: feature:3233769-3233839:-1:exon
so has part: feature:3232963-3233038:-1:exon
so has part: feature:3232771-3232833:-1:exon
so has part: feature:3231423-3231492:-1:exon
so has part: feature:3228314-3228396:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3246917-3247030:-1:exon

position:3246917:-1
position: 3246917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3246033-3246158:-1:exon

position:3246033:-1
position: 3246033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3246158:-1
position: 3246158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3235135-3235268:-1:exon

position:3235135:-1
position: 3235135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3235268:-1
position: 3235268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3233976-3234093:-1:exon

position:3233976:-1
position: 3233976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3234093:-1
position: 3234093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3233769-3233839:-1:exon

position:3233769:-1
position: 3233769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3233839:-1
position: 3233839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3232963-3233038:-1:exon

position:3232963:-1
position: 3232963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3233038:-1
position: 3233038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3232771-3232833:-1:exon

position:3232771:-1
position: 3232771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3232833:-1
position: 3232833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3231423-3231492:-1:exon

position:3231423:-1
position: 3231423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3231492:-1
position: 3231492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3228314-3228396:-1:exon

position:3228396:-1
position: 3228396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116779995
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779995
product: tropomyosin beta chain-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 41% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674505.1
SIO_010081: LOC116779995
subclass of: SO_0000673
so part of: LOC116779995
location: complement(join(3228314..3228396,3231423..3231492,3232771..3232833,3233465..3233540,3233769..3233839,3233976..3234093,3235135..3235268,3246033..3246158,3246917..3247030))
location: region:3228314-3247030:-1
so has part: feature:3246917-3247030:-1:exon
so has part: feature:3246033-3246158:-1:exon
so has part: feature:3235135-3235268:-1:exon
so has part: feature:3233976-3234093:-1:exon
so has part: feature:3233769-3233839:-1:exon
so has part: feature:3233465-3233540:-1:exon
so has part: feature:3232771-3232833:-1:exon
so has part: feature:3231423-3231492:-1:exon
so has part: feature:3228314-3228396:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3246917-3247030:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3246033-3246158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3235135-3235268:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3233976-3234093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3233769-3233839:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3233465-3233540:-1:exon

position:3233465:-1
position: 3233465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3233540:-1
position: 3233540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3232771-3232833:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3231423-3231492:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3228314-3228396:-1:exon

LOC116779995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779995
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin beta chain-like isoform X4
translation: MEAIKKKMQMLKLDKENAIDRSEQAEADKKQAEDRCKQLEEEQQGLQKKLKGTEEEVEKYSESVKEAQEKLEQAEKKATDAEAEVASLNRRIQLVEEELDRAQERLTTALQKLEEAEKAADESERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEEADHKYEEVARKLVVLEGELERSEERAEVAESKCGDLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLLGEKLKEAETRAEFAERSVAKLEKTIDDLEESLASAKEENVGIQQVLDQTLVELNNL
SIO_010081: LOC116779995
subclass of: SO_0000673
so part of: LOC116779995
location: complement(join(3228314..3228396,3231423..3231492,3232771..3232833,3232963..3233038,3233769..3233839,3233976..3234093,3235135..3235268,3246033..3246158,3246917..3247030))
location: region:3228314-3247030:-1
so has part: feature:3246917-3247030:-1:exon
so has part: feature:3246033-3246158:-1:exon
so has part: feature:3235135-3235268:-1:exon
so has part: feature:3233976-3234093:-1:exon
so has part: feature:3233769-3233839:-1:exon
so has part: feature:3232963-3233038:-1:exon
so has part: feature:3232771-3232833:-1:exon
so has part: feature:3231423-3231492:-1:exon
so has part: feature:3228314-3228396:-1:exon

XP_032530397.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3246917-3247030:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3246033-3246158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3235135-3235268:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3233976-3234093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3233769-3233839:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3232963-3233038:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3232771-3232833:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3231423-3231492:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3228314-3228396:-1:exon

LOC116779995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779995
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin beta chain-like isoform X3
translation: MEAIKKKMQMLKLDKENAIDRSEQAEADKKQAEDRCKQLEEEQQGLQKKLKGTEEEVEKYSESVKEAQEKLEQAEKKATDAEAEVASLNRRIQLVEEELDRAQERLTTALQKLEEAEKAADESERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEEADHKYEEVARKLVVLEGELERSEERAEVAESRVRQLEEELRTMDQTLKSLIASEEEYSTKEDKYEEEIKLLGEKLKEAETRAEFAERSVAKLEKTIDDLEESLASAKEENVGIQQVLDQTLVELNNL
SIO_010081: LOC116779995
subclass of: SO_0000673
so part of: LOC116779995
location: complement(join(3228314..3228396,3231423..3231492,3232771..3232833,3233465..3233540,3233769..3233839,3233976..3234093,3235135..3235268,3246033..3246158,3246917..3247030))
location: region:3228314-3247030:-1
so has part: feature:3246917-3247030:-1:exon
so has part: feature:3246033-3246158:-1:exon
so has part: feature:3235135-3235268:-1:exon
so has part: feature:3233976-3234093:-1:exon
so has part: feature:3233769-3233839:-1:exon
so has part: feature:3233465-3233540:-1:exon
so has part: feature:3232771-3232833:-1:exon
so has part: feature:3231423-3231492:-1:exon
so has part: feature:3228314-3228396:-1:exon

XP_032530396.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3246917-3247030:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3246033-3246158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3235135-3235268:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3233976-3234093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3233769-3233839:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3233465-3233540:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3232771-3232833:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3231423-3231492:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3228314-3228396:-1:exon

LOC116779995
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779995
product: tropomyosin beta chain-like, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 21% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674512.1
SIO_010081: LOC116779995
subclass of: SO_0000673
so part of: LOC116779995
location: complement(join(3228314..3228396,3231423..3231492,3232771..3232833,3232963..3233038,3233769..3233839,3233976..3234093,3235135..3235268,3242189..3242320))
location: region:3228314-3242320:-1
so has part: feature:3242189-3242320:-1:exon
so has part: feature:3235135-3235268:-1:exon
so has part: feature:3233976-3234093:-1:exon
so has part: feature:3233769-3233839:-1:exon
so has part: feature:3232963-3233038:-1:exon
so has part: feature:3232771-3232833:-1:exon
so has part: feature:3231423-3231492:-1:exon
so has part: feature:3228314-3228396:-1:exon

position:3242320:-1
position: 3242320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3242189-3242320:-1:exon

position:3242189:-1
position: 3242189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3235135-3235268:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3233976-3234093:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3233769-3233839:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3232963-3233038:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3232771-3232833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3231423-3231492:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3228314-3228396:-1:exon

LOC116779995
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779995
product: tropomyosin beta chain-like, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 23% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674514.1
SIO_010081: LOC116779995
subclass of: SO_0000673
so part of: LOC116779995
location: complement(join(3228314..3228396,3231423..3231492,3233465..3233540,3233769..3233839,3233976..3234093,3235135..3235268,3242189..3242320))
location: region:3228314-3242320:-1
so has part: feature:3242189-3242320:-1:exon
so has part: feature:3235135-3235268:-1:exon
so has part: feature:3233976-3234093:-1:exon
so has part: feature:3233769-3233839:-1:exon
so has part: feature:3233465-3233540:-1:exon
so has part: feature:3231423-3231492:-1:exon
so has part: feature:3228314-3228396:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3242189-3242320:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3235135-3235268:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3233976-3234093:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3233769-3233839:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3233465-3233540:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3231423-3231492:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3228314-3228396:-1:exon

LOC116779995
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779995
product: tropomyosin beta chain-like, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674511.1
SIO_010081: LOC116779995
subclass of: SO_0000673
so part of: LOC116779995
location: complement(join(3228314..3228396,3231423..3231492,3232771..3232833,3233465..3233540,3233769..3233839,3233976..3234093,3235135..3235268,3242189..3242320))
location: region:3228314-3242320:-1
so has part: feature:3242189-3242320:-1:exon
so has part: feature:3235135-3235268:-1:exon
so has part: feature:3233976-3234093:-1:exon
so has part: feature:3233769-3233839:-1:exon
so has part: feature:3233465-3233540:-1:exon
so has part: feature:3232771-3232833:-1:exon
so has part: feature:3231423-3231492:-1:exon
so has part: feature:3228314-3228396:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3242189-3242320:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3235135-3235268:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3233976-3234093:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3233769-3233839:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3233465-3233540:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3232771-3232833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3231423-3231492:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3228314-3228396:-1:exon

LOC116779995
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779995
product: tropomyosin beta chain-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674509.1
SIO_010081: LOC116779995
subclass of: SO_0000673
so part of: LOC116779995
location: complement(join(3228314..3228383,3231407..3231492,3232771..3232833,3233465..3233540,3233769..3233839,3233976..3234093,3235135..3235268,3242189..3242320))
location: region:3228314-3242320:-1
so has part: feature:3242189-3242320:-1:exon
so has part: feature:3235135-3235268:-1:exon
so has part: feature:3233976-3234093:-1:exon
so has part: feature:3233769-3233839:-1:exon
so has part: feature:3233465-3233540:-1:exon
so has part: feature:3232771-3232833:-1:exon
so has part: feature:3231407-3231492:-1:exon
so has part: feature:3228314-3228383:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3242189-3242320:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3235135-3235268:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3233976-3234093:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3233769-3233839:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3233465-3233540:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3232771-3232833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3231407-3231492:-1:exon

position:3231407:-1
position: 3231407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3228314-3228383:-1:exon

position:3228383:-1
position: 3228383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116779995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779995
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-4 chain-like isoform X10
translation: MAGISSIDAVKKKIQSLQQVVDEAEERAEHLQREADAERQAREGAEAEVASLNRRIQLVEEELDRAQERLTTALQKLEEAEKAADESERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEEADHKYEEVARKLVVLEGELERSEERAEVAESKCGDLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLLGEKLKEAETRAEFAERSVAKLEKTIDDLEESLASAKEENVGIQQVLDQTLVELNNL
SIO_010081: LOC116779995
subclass of: SO_0000673
so part of: LOC116779995
location: complement(join(3228314..3228396,3231423..3231492,3232771..3232833,3232963..3233038,3233769..3233839,3233976..3234093,3235135..3235268,3242189..3242320))
location: region:3228314-3242320:-1
so has part: feature:3242189-3242320:-1:exon
so has part: feature:3235135-3235268:-1:exon
so has part: feature:3233976-3234093:-1:exon
so has part: feature:3233769-3233839:-1:exon
so has part: feature:3232963-3233038:-1:exon
so has part: feature:3232771-3232833:-1:exon
so has part: feature:3231423-3231492:-1:exon
so has part: feature:3228314-3228396:-1:exon

XP_032530403.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3242189-3242320:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3235135-3235268:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3233976-3234093:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3233769-3233839:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3232963-3233038:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3232771-3232833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3231423-3231492:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3228314-3228396:-1:exon

LOC116779995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779995
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-4 chain-like isoform X11
translation: MAGISSIDAVKKKIQSLQQVVDEAEERAEHLQREADAERQAREGAEAEVASLNRRIQLVEEELDRAQERLTTALQKLEEAEKAADESERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEEADHKYEEVARKLVVLEGELERSEERAEVAESRVRQLEEELRTMDQTLKSLIASEEEAETRAEFAERSVAKLEKTIDDLEESLASAKEENVGIQQVLDQTLVELNNL
SIO_010081: LOC116779995
subclass of: SO_0000673
so part of: LOC116779995
location: complement(join(3228314..3228396,3231423..3231492,3233465..3233540,3233769..3233839,3233976..3234093,3235135..3235268,3242189..3242320))
location: region:3228314-3242320:-1
so has part: feature:3242189-3242320:-1:exon
so has part: feature:3235135-3235268:-1:exon
so has part: feature:3233976-3234093:-1:exon
so has part: feature:3233769-3233839:-1:exon
so has part: feature:3233465-3233540:-1:exon
so has part: feature:3231423-3231492:-1:exon
so has part: feature:3228314-3228396:-1:exon

XP_032530405.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3242189-3242320:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3235135-3235268:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3233976-3234093:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3233769-3233839:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3233465-3233540:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3231423-3231492:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3228314-3228396:-1:exon

LOC116779995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779995
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-4 chain-like isoform X9
translation: MAGISSIDAVKKKIQSLQQVVDEAEERAEHLQREADAERQAREGAEAEVASLNRRIQLVEEELDRAQERLTTALQKLEEAEKAADESERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEEADHKYEEVARKLVVLEGELERSEERAEVAESRVRQLEEELRTMDQTLKSLIASEEEYSTKEDKYEEEIKLLGEKLKEAETRAEFAERSVAKLEKTIDDLEESLASAKEENVGIQQVLDQTLVELNNL
SIO_010081: LOC116779995
subclass of: SO_0000673
so part of: LOC116779995
location: complement(join(3228314..3228396,3231423..3231492,3232771..3232833,3233465..3233540,3233769..3233839,3233976..3234093,3235135..3235268,3242189..3242320))
location: region:3228314-3242320:-1
so has part: feature:3242189-3242320:-1:exon
so has part: feature:3235135-3235268:-1:exon
so has part: feature:3233976-3234093:-1:exon
so has part: feature:3233769-3233839:-1:exon
so has part: feature:3233465-3233540:-1:exon
so has part: feature:3232771-3232833:-1:exon
so has part: feature:3231423-3231492:-1:exon
so has part: feature:3228314-3228396:-1:exon

XP_032530402.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3242189-3242320:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3235135-3235268:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3233976-3234093:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3233769-3233839:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3233465-3233540:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3232771-3232833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3231423-3231492:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3228314-3228396:-1:exon

LOC116779995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779995
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain-like isoform X7
translation: MAGISSIDAVKKKIQSLQQVVDEAEERAEHLQREADAERQAREGAEAEVASLNRRIQLVEEELDRAQERLTTALQKLEEAEKAADESERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEEADHKYEEVARKLVVLEGELERSEERAEVAESRVRQLEEELRTMDQTLKSLIASEEEYSTKEDKYEEEIKLLGEKLKEAETRAEFAERSVAKLEKTIDDLEGKMSSLAKEENVGIQQVLDQTLVELNNL
SIO_010081: LOC116779995
subclass of: SO_0000673
so part of: LOC116779995
location: complement(join(3228314..3228383,3231407..3231492,3232771..3232833,3233465..3233540,3233769..3233839,3233976..3234093,3235135..3235268,3242189..3242320))
location: region:3228314-3242320:-1
so has part: feature:3242189-3242320:-1:exon
so has part: feature:3235135-3235268:-1:exon
so has part: feature:3233976-3234093:-1:exon
so has part: feature:3233769-3233839:-1:exon
so has part: feature:3233465-3233540:-1:exon
so has part: feature:3232771-3232833:-1:exon
so has part: feature:3231407-3231492:-1:exon
so has part: feature:3228314-3228383:-1:exon

XP_032530400.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3242189-3242320:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3235135-3235268:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3233976-3234093:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3233769-3233839:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3233465-3233540:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3232771-3232833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3231407-3231492:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3228314-3228383:-1:exon

LOC116779995
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779995
product: tropomyosin beta chain-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 28% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674507.1
SIO_010081: LOC116779995
subclass of: SO_0000673
so part of: LOC116779995
location: complement(join(3229593..3229672,3231423..3231492,3232771..3232833,3232963..3233038,3233769..3233839,3233976..3234093,3235135..3235268,3246033..3246158,3246917..3247030))
location: region:3229593-3247030:-1
so has part: feature:3246917-3247030:-1:exon
so has part: feature:3246033-3246158:-1:exon
so has part: feature:3235135-3235268:-1:exon
so has part: feature:3233976-3234093:-1:exon
so has part: feature:3233769-3233839:-1:exon
so has part: feature:3232963-3233038:-1:exon
so has part: feature:3232771-3232833:-1:exon
so has part: feature:3231423-3231492:-1:exon
so has part: feature:3229593-3229672:-1:exon

position:3229593:-1
position: 3229593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3246917-3247030:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3246033-3246158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3235135-3235268:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3233976-3234093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3233769-3233839:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3232963-3233038:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3232771-3232833:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3231423-3231492:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3229593-3229672:-1:exon

position:3229672:-1
position: 3229672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116779995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779995
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin beta chain-like isoform X5
translation: MEAIKKKMQMLKLDKENAIDRSEQAEADKKQAEDRCKQLEEEQQGLQKKLKGTEEEVEKYSESVKEAQEKLEQAEKKATDAEAEVASLNRRIQLVEEELDRAQERLTTALQKLEEAEKAADESERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEEADHKYEEVARKLVVLEGELERSEERAEVAESKCGDLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLLGEKLKEAETRAEFAERSVAKLEKTIDDLEEHSQQEAKKNHILANKLQVILTKLNN
SIO_010081: LOC116779995
subclass of: SO_0000673
so part of: LOC116779995
location: complement(join(3229593..3229672,3231423..3231492,3232771..3232833,3232963..3233038,3233769..3233839,3233976..3234093,3235135..3235268,3246033..3246158,3246917..3247030))
location: region:3229593-3247030:-1
so has part: feature:3246917-3247030:-1:exon
so has part: feature:3246033-3246158:-1:exon
so has part: feature:3235135-3235268:-1:exon
so has part: feature:3233976-3234093:-1:exon
so has part: feature:3233769-3233839:-1:exon
so has part: feature:3232963-3233038:-1:exon
so has part: feature:3232771-3232833:-1:exon
so has part: feature:3231423-3231492:-1:exon
so has part: feature:3229593-3229672:-1:exon

XP_032530398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3246917-3247030:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3246033-3246158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3235135-3235268:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3233976-3234093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3233769-3233839:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3232963-3233038:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3232771-3232833:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3231423-3231492:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3229593-3229672:-1:exon

LOC116779995
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779995
product: tropomyosin beta chain-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 44% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674504.1
SIO_010081: LOC116779995
subclass of: SO_0000673
so part of: LOC116779995
location: complement(join(3230973..3231082,3231423..3231492,3232771..3232833,3232963..3233038,3233769..3233839,3233976..3234093,3235135..3235268,3246033..3246158,3246917..3247030))
location: region:3230973-3247030:-1
so has part: feature:3246917-3247030:-1:exon
so has part: feature:3246033-3246158:-1:exon
so has part: feature:3235135-3235268:-1:exon
so has part: feature:3233976-3234093:-1:exon
so has part: feature:3233769-3233839:-1:exon
so has part: feature:3232963-3233038:-1:exon
so has part: feature:3232771-3232833:-1:exon
so has part: feature:3231423-3231492:-1:exon
so has part: feature:3230973-3231082:-1:exon

position:3230973:-1
position: 3230973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3246917-3247030:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3246033-3246158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3235135-3235268:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3233976-3234093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3233769-3233839:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3232963-3233038:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3232771-3232833:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3231423-3231492:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3230973-3231082:-1:exon

position:3231082:-1
position: 3231082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116779995
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779995
product: tropomyosin beta chain-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 57% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674503.1
SIO_010081: LOC116779995
subclass of: SO_0000673
so part of: LOC116779995
location: complement(join(3230973..3231082,3231423..3231492,3232771..3232833,3233465..3233540,3233769..3233839,3233976..3234093,3235135..3235268,3246033..3246158,3246917..3247030))
location: region:3230973-3247030:-1
so has part: feature:3246917-3247030:-1:exon
so has part: feature:3246033-3246158:-1:exon
so has part: feature:3235135-3235268:-1:exon
so has part: feature:3233976-3234093:-1:exon
so has part: feature:3233769-3233839:-1:exon
so has part: feature:3233465-3233540:-1:exon
so has part: feature:3232771-3232833:-1:exon
so has part: feature:3231423-3231492:-1:exon
so has part: feature:3230973-3231082:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3246917-3247030:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3246033-3246158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3235135-3235268:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3233976-3234093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3233769-3233839:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3233465-3233540:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3232771-3232833:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3231423-3231492:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3230973-3231082:-1:exon

LOC116779995
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779995
product: tropomyosin beta chain-like, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 40% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674510.1
SIO_010081: LOC116779995
subclass of: SO_0000673
so part of: LOC116779995
location: complement(join(3230973..3231082,3231423..3231492,3232771..3232833,3232963..3233038,3233769..3233839,3233976..3234093,3235135..3235268,3242189..3242320))
location: region:3230973-3242320:-1
so has part: feature:3242189-3242320:-1:exon
so has part: feature:3235135-3235268:-1:exon
so has part: feature:3233976-3234093:-1:exon
so has part: feature:3233769-3233839:-1:exon
so has part: feature:3232963-3233038:-1:exon
so has part: feature:3232771-3232833:-1:exon
so has part: feature:3231423-3231492:-1:exon
so has part: feature:3230973-3231082:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3242189-3242320:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3235135-3235268:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3233976-3234093:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3233769-3233839:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3232963-3233038:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3232771-3232833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3231423-3231492:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3230973-3231082:-1:exon

LOC116779995
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779995
product: tropomyosin beta chain-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 54% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674508.1
SIO_010081: LOC116779995
subclass of: SO_0000673
so part of: LOC116779995
location: complement(join(3230973..3231082,3231423..3231492,3232771..3232833,3233465..3233540,3233769..3233839,3233976..3234093,3235135..3235268,3242189..3242320))
location: region:3230973-3242320:-1
so has part: feature:3242189-3242320:-1:exon
so has part: feature:3235135-3235268:-1:exon
so has part: feature:3233976-3234093:-1:exon
so has part: feature:3233769-3233839:-1:exon
so has part: feature:3233465-3233540:-1:exon
so has part: feature:3232771-3232833:-1:exon
so has part: feature:3231423-3231492:-1:exon
so has part: feature:3230973-3231082:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3242189-3242320:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3235135-3235268:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3233976-3234093:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3233769-3233839:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3233465-3233540:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3232771-3232833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3231423-3231492:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3230973-3231082:-1:exon

LOC116779995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779995
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin beta chain-like isoform X2
translation: MEAIKKKMQMLKLDKENAIDRSEQAEADKKQAEDRCKQLEEEQQGLQKKLKGTEEEVEKYSESVKEAQEKLEQAEKKATDAEAEVASLNRRIQLVEEELDRAQERLTTALQKLEEAEKAADESERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEEADHKYEEVARKLVVLEGELERSEERAEVAESKCGDLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLLGEKLKEAETRAEFAERSVAKLEKTIDDLEDEVYAQKMKYKAISEELDNALNDITSL
SIO_010081: LOC116779995
subclass of: SO_0000673
so part of: LOC116779995
location: complement(join(3231000..3231082,3231423..3231492,3232771..3232833,3232963..3233038,3233769..3233839,3233976..3234093,3235135..3235268,3246033..3246158,3246917..3247030))
location: region:3231000-3247030:-1
so has part: feature:3246917-3247030:-1:exon
so has part: feature:3246033-3246158:-1:exon
so has part: feature:3235135-3235268:-1:exon
so has part: feature:3233976-3234093:-1:exon
so has part: feature:3233769-3233839:-1:exon
so has part: feature:3232963-3233038:-1:exon
so has part: feature:3232771-3232833:-1:exon
so has part: feature:3231423-3231492:-1:exon
so has part: feature:3231000-3231082:-1:exon

XP_032530395.1
type: Protein
SIO_000068: ncbiprotein

position:3231000:-1
position: 3231000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3246917-3247030:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3246033-3246158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3235135-3235268:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3233976-3234093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3233769-3233839:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3232963-3233038:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3232771-3232833:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3231423-3231492:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3231000-3231082:-1:exon

LOC116779995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779995
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin beta chain-like isoform X1
translation: MEAIKKKMQMLKLDKENAIDRSEQAEADKKQAEDRCKQLEEEQQGLQKKLKGTEEEVEKYSESVKEAQEKLEQAEKKATDAEAEVASLNRRIQLVEEELDRAQERLTTALQKLEEAEKAADESERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEEADHKYEEVARKLVVLEGELERSEERAEVAESRVRQLEEELRTMDQTLKSLIASEEEYSTKEDKYEEEIKLLGEKLKEAETRAEFAERSVAKLEKTIDDLEDEVYAQKMKYKAISEELDNALNDITSL
SIO_010081: LOC116779995
subclass of: SO_0000673
so part of: LOC116779995
location: complement(join(3231000..3231082,3231423..3231492,3232771..3232833,3233465..3233540,3233769..3233839,3233976..3234093,3235135..3235268,3246033..3246158,3246917..3247030))
location: region:3231000-3247030:-1
so has part: feature:3246917-3247030:-1:exon
so has part: feature:3246033-3246158:-1:exon
so has part: feature:3235135-3235268:-1:exon
so has part: feature:3233976-3234093:-1:exon
so has part: feature:3233769-3233839:-1:exon
so has part: feature:3233465-3233540:-1:exon
so has part: feature:3232771-3232833:-1:exon
so has part: feature:3231423-3231492:-1:exon
so has part: feature:3231000-3231082:-1:exon

XP_032530394.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3246917-3247030:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3246033-3246158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3235135-3235268:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3233976-3234093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3233769-3233839:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3233465-3233540:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3232771-3232833:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3231423-3231492:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3231000-3231082:-1:exon

LOC116779995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779995
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin beta chain-like isoform X8
translation: MAGISSIDAVKKKIQSLQQVVDEAEERAEHLQREADAERQAREGAEAEVASLNRRIQLVEEELDRAQERLTTALQKLEEAEKAADESERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEEADHKYEEVARKLVVLEGELERSEERAEVAESKCGDLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLLGEKLKEAETRAEFAERSVAKLEKTIDDLEDEVYAQKMKYKAISEELDNALNDITSL
SIO_010081: LOC116779995
subclass of: SO_0000673
so part of: LOC116779995
location: complement(join(3231000..3231082,3231423..3231492,3232771..3232833,3232963..3233038,3233769..3233839,3233976..3234093,3235135..3235268,3242189..3242320))
location: region:3231000-3242320:-1
so has part: feature:3242189-3242320:-1:exon
so has part: feature:3235135-3235268:-1:exon
so has part: feature:3233976-3234093:-1:exon
so has part: feature:3233769-3233839:-1:exon
so has part: feature:3232963-3233038:-1:exon
so has part: feature:3232771-3232833:-1:exon
so has part: feature:3231423-3231492:-1:exon
so has part: feature:3231000-3231082:-1:exon

XP_032530401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3242189-3242320:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3235135-3235268:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3233976-3234093:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3233769-3233839:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3232963-3233038:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3232771-3232833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3231423-3231492:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3231000-3231082:-1:exon

LOC116779995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779995
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain-like isoform X6
translation: MAGISSIDAVKKKIQSLQQVVDEAEERAEHLQREADAERQAREGAEAEVASLNRRIQLVEEELDRAQERLTTALQKLEEAEKAADESERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEEADHKYEEVARKLVVLEGELERSEERAEVAESRVRQLEEELRTMDQTLKSLIASEEEYSTKEDKYEEEIKLLGEKLKEAETRAEFAERSVAKLEKTIDDLEDEVYAQKMKYKAISEELDNALNDITSL
SIO_010081: LOC116779995
subclass of: SO_0000673
so part of: LOC116779995
location: complement(join(3231000..3231082,3231423..3231492,3232771..3232833,3233465..3233540,3233769..3233839,3233976..3234093,3235135..3235268,3242189..3242320))
location: region:3231000-3242320:-1
so has part: feature:3242189-3242320:-1:exon
so has part: feature:3235135-3235268:-1:exon
so has part: feature:3233976-3234093:-1:exon
so has part: feature:3233769-3233839:-1:exon
so has part: feature:3233465-3233540:-1:exon
so has part: feature:3232771-3232833:-1:exon
so has part: feature:3231423-3231492:-1:exon
so has part: feature:3231000-3231082:-1:exon

XP_032530399.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3242189-3242320:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3235135-3235268:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3233976-3234093:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3233769-3233839:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3233465-3233540:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3232771-3232833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3231423-3231492:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3231000-3231082:-1:exon

LOC116780007
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780007
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3258934..3273337
location: region:3258934-3273337:1
so has part: feature:3258934-3273337:1:exon
subclass of: SO_0000011

116780007
type: Gene
SIO_000068: ncbigene

position:3258934:1
position: 3258934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3273337:1
position: 3273337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3258934-3273337:1:exon

LOC116780007
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780007
product: uncharacterized LOC116780007
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004354280.1
SIO_010081: LOC116780007
subclass of: SO_0000673
so part of: LOC116780007
location: join(3258934..3259111,3259747..3259748,3273328..3273337)
location: region:3258934-3273337:1
so has part: feature:3258934-3259111:1:exon
so has part: feature:3259747-3259748:1:exon
so has part: feature:3273328-3273337:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3258934-3259111:1:exon

position:3259111:1
position: 3259111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3259747-3259748:1:exon

position:3259747:1
position: 3259747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3259748:1
position: 3259748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3273328-3273337:1:exon

position:3273328:1
position: 3273328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRNAE-UUC
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: TRNAE-UUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(3330498..3330569)
location: region:3330498-3330569:-1
so has part: feature:3330498-3330569:-1:exon
subclass of: SO_0000663

116780101
type: Gene
SIO_000068: ncbigene

position:3330498:-1
position: 3330498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3330569:-1
position: 3330569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3330498-3330569:-1:exon

TRNAE-UUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 296741
gene: TRNAE-UUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon UUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(3330534..3330536),aa:Glu, seq:ttc)
SIO_010081: TRNAE-UUC
subclass of: SO_0000673
so part of: TRNAE-UUC
location: complement(3330498..3330569)
location: region:3330498-3330569:-1
so has part: feature:3330498-3330569:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3330498-3330569:-1:exon

LOC116780015
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780015
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3348840..3364525)
location: region:3348840-3364525:-1
so has part: feature:3348840-3364525:-1:exon
subclass of: SO_0000011

116780015
type: Gene
SIO_000068: ncbigene

position:3348840:-1
position: 3348840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3364525:-1
position: 3364525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3348840-3364525:-1:exon

LOC116780015
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780015
product: uncharacterized LOC116780015
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004354287.1
SIO_010081: LOC116780015
subclass of: SO_0000673
so part of: LOC116780015
location: complement(join(3348840..3348916,3350465..3350469,3364515..3364525))
location: region:3348840-3364525:-1
so has part: feature:3364515-3364525:-1:exon
so has part: feature:3350465-3350469:-1:exon
so has part: feature:3348840-3348916:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3364515-3364525:-1:exon

position:3364515:-1
position: 3364515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3350465-3350469:-1:exon

position:3350465:-1
position: 3350465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3350469:-1
position: 3350469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3348840-3348916:-1:exon

position:3348916:-1
position: 3348916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116779989
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779989
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3427034..3625191)
location: region:3427034-3625191:-1
so has part: feature:3427034-3625191:-1:exon
subclass of: SO_0000010

116779989
type: Gene
SIO_000068: ncbigene

position:3427034:-1
position: 3427034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3625191:-1
position: 3625191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3427034-3625191:-1:exon

LOC116779989
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779989
product: zinc finger SWIM domain-containing protein 6-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 27% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674493.1
SIO_010081: LOC116779989
subclass of: SO_0000673
so part of: LOC116779989
location: complement(join(3427034..3427896,3434439..3434520,3470509..3470672,3471169..3471326,3475895..3476030,3479219..3479479,3481620..3481766,3488094..3488255,3508230..3508380,3508907..3509055,3518276..3518632,3624663..3625191))
location: region:3427034-3625191:-1
so has part: feature:3624663-3625191:-1:exon
so has part: feature:3518276-3518632:-1:exon
so has part: feature:3508907-3509055:-1:exon
so has part: feature:3508230-3508380:-1:exon
so has part: feature:3488094-3488255:-1:exon
so has part: feature:3481620-3481766:-1:exon
so has part: feature:3479219-3479479:-1:exon
so has part: feature:3475895-3476030:-1:exon
so has part: feature:3471169-3471326:-1:exon
so has part: feature:3470509-3470672:-1:exon
so has part: feature:3434439-3434520:-1:exon
so has part: feature:3427034-3427896:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3624663-3625191:-1:exon

position:3624663:-1
position: 3624663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3518276-3518632:-1:exon

position:3518276:-1
position: 3518276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3518632:-1
position: 3518632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3508907-3509055:-1:exon

position:3508907:-1
position: 3508907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3509055:-1
position: 3509055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3508230-3508380:-1:exon

position:3508230:-1
position: 3508230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3508380:-1
position: 3508380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3488094-3488255:-1:exon

position:3488094:-1
position: 3488094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3488255:-1
position: 3488255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3481620-3481766:-1:exon

position:3481620:-1
position: 3481620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3481766:-1
position: 3481766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3479219-3479479:-1:exon

position:3479219:-1
position: 3479219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3479479:-1
position: 3479479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3475895-3476030:-1:exon

position:3475895:-1
position: 3475895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3476030:-1
position: 3476030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3471169-3471326:-1:exon

position:3471169:-1
position: 3471169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3471326:-1
position: 3471326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3470509-3470672:-1:exon

position:3470509:-1
position: 3470509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3470672:-1
position: 3470672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3434439-3434520:-1:exon

position:3434439:-1
position: 3434439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3434520:-1
position: 3434520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3427034-3427896:-1:exon

position:3427896:-1
position: 3427896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116779989
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779989
product: zinc finger SWIM domain-containing protein 6-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674492.1
SIO_010081: LOC116779989
subclass of: SO_0000673
so part of: LOC116779989
location: complement(join(3427034..3427896,3434439..3434520,3470509..3470672,3471169..3471326,3475895..3476030,3479219..3479479,3481620..3481766,3485939..3486085,3486363..3486539,3488076..3488255,3508230..3508380,3508907..3509055,3518276..3518632,3624663..3625191))
location: region:3427034-3625191:-1
so has part: feature:3624663-3625191:-1:exon
so has part: feature:3518276-3518632:-1:exon
so has part: feature:3508907-3509055:-1:exon
so has part: feature:3508230-3508380:-1:exon
so has part: feature:3488076-3488255:-1:exon
so has part: feature:3486363-3486539:-1:exon
so has part: feature:3485939-3486085:-1:exon
so has part: feature:3481620-3481766:-1:exon
so has part: feature:3479219-3479479:-1:exon
so has part: feature:3475895-3476030:-1:exon
so has part: feature:3471169-3471326:-1:exon
so has part: feature:3470509-3470672:-1:exon
so has part: feature:3434439-3434520:-1:exon
so has part: feature:3427034-3427896:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3624663-3625191:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3518276-3518632:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3508907-3509055:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3508230-3508380:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3488076-3488255:-1:exon

position:3488076:-1
position: 3488076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3486363-3486539:-1:exon

position:3486363:-1
position: 3486363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3486539:-1
position: 3486539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3485939-3486085:-1:exon

position:3485939:-1
position: 3485939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3486085:-1
position: 3486085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3481620-3481766:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3479219-3479479:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3475895-3476030:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3471169-3471326:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3470509-3470672:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3434439-3434520:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3427034-3427896:-1:exon

LOC116779989
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779989
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger SWIM domain-containing protein 6-like isoform X2
translation: MAERGQLPFPSKRLCCRPGYGLACRLGQRVGGTELGSGALCAGPSSAAATVAAAAAALGLLPLGKTQSPESLLDIAARKVAEKWPFQQVEERFERIPEPVQRRIVYWSFPRSEREICMYSSFNTGAEDLATAPGGAVAGTAPGGGADTAAVDENRLPFRRGIALLDGGCVDNVLQVGFHLSGTVTDPAMQSEPETLCNVAISFDRCKITSVTCSCGNKDIFYCAHVVALSLYRIRKPDQVKLHLPISETLFQMNRDQLQKFVQYLITVHHTEVLPTAQKLADEILSQNSEINQVHGAPDPTAGASIDDENCWHLDEEQVQEQVKLFLSQGGYHGSGKQLNLLFAKVREMLKMRDSNGARMLTLITEQFMADPRLSLWTQQGTAMTDKYRQLWDELGALWMCIVLNPHCKLEQKVSWLKQLKKWNGVDVCPCEDGNHGNELPNLTNALPQELLHKGVTSITNLEGWVGHPLDPIGTLFSSLIEACRVDDENFHGFSDFTENMGQCKSLEYQHLPAHKFLEEGESYLTLAVEVALIGLGQQRIMPDGLYAQEKVCRNEEQLISKLQEIELDDTLVKIFRKQAVFLLEAGPYSGLGEIIHRESVPMHTFAKYLFTSLLPHDAELAYKTALRAMRLRVLESTTPLGDMSRPHHIVSVVPNRYPRWFTLSHIESQQCELASTMLTAAKGDVQRLETVLESIQKNIHSSSHIFKLAQDAFKIATLMDNLPDITLLKVSLELGLQVMRMTLSTLNWRRREMVRWLVTCATEIGVYALDSIMQNWFTLFTPTEATSIVATTVMSNSTIVRLHLDCHQQEKLAGSARTLALQCAMKDPQNCALSALTLCEKDHIAFETAYQIVLDAATTSMSYSQLFTIARYMEHRGYPMRAYKLATLAMTHLNLSYNQDTHPAINDVLWACVLSHSLGKNELAVIIPLVVKSVKCATVLSDILRRCTLTTPGMVGLHGRRNSGKLMSLDKAPLRQLLDATIGAYINTTHSRLTHISPRHYSEFIEFLSKARETFLMAHDGHMQFSQFIDNLKQIYKGKKKLMMLVRERFG
SIO_010081: LOC116779989
subclass of: SO_0000673
so part of: LOC116779989
location: complement(join(3427034..3427896,3434439..3434520,3470509..3470672,3471169..3471326,3475895..3476030,3479219..3479479,3481620..3481766,3488094..3488255,3508230..3508380,3508907..3509055,3518276..3518632,3624663..3625191))
location: region:3427034-3625191:-1
so has part: feature:3624663-3625191:-1:exon
so has part: feature:3518276-3518632:-1:exon
so has part: feature:3508907-3509055:-1:exon
so has part: feature:3508230-3508380:-1:exon
so has part: feature:3488094-3488255:-1:exon
so has part: feature:3481620-3481766:-1:exon
so has part: feature:3479219-3479479:-1:exon
so has part: feature:3475895-3476030:-1:exon
so has part: feature:3471169-3471326:-1:exon
so has part: feature:3470509-3470672:-1:exon
so has part: feature:3434439-3434520:-1:exon
so has part: feature:3427034-3427896:-1:exon

XP_032530384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3624663-3625191:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3518276-3518632:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3508907-3509055:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3508230-3508380:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3488094-3488255:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3481620-3481766:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3479219-3479479:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3475895-3476030:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3471169-3471326:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3470509-3470672:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3434439-3434520:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3427034-3427896:-1:exon

LOC116779989
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779989
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger SWIM domain-containing protein 6-like isoform X1
translation: MAERGQLPFPSKRLCCRPGYGLACRLGQRVGGTELGSGALCAGPSSAAATVAAAAAALGLLPLGKTQSPESLLDIAARKVAEKWPFQQVEERFERIPEPVQRRIVYWSFPRSEREICMYSSFNTGAEDLATAPGGAVAGTAPGGGADTAAVDENRLPFRRGIALLDGGCVDNVLQVGFHLSGTVTDPAMQSEPETLCNVAISFDRCKITSVTCSCGNKDIFYCAHVVALSLYRIRKPDQVKLHLPISETLFQMNRDQLQKFVQYLITVHHTEVLPTAQKLADEILSQNSEINQVHGAPDPTAGASIDDENCWHLDEEQVQEQVKLFLSQGGYHGSGKQLNLLFAKVREMLKMRDSNGARMLTLITEQFMADPRLSLWTQQGTAMTDKYRQLWDELGALWMCIVLNPHCKLEQKVSWLKQLKKWNGVDVCPCEDGNHGNELPNLTNALPQGANANQDSSNRPHRTVFTRAIEACDLHWQDSHLQHIISSDLYTNYCYHDNTENSLYDSQGWPLWHEHVPTACARVDALRSHGYPREALRLAIAIVNTLRRQQQKQLEMFQVQKKELLHKGVTSITNLEGWVGHPLDPIGTLFSSLIEACRVDDENFHGFSDFTENMGQCKSLEYQHLPAHKFLEEGESYLTLAVEVALIGLGQQRIMPDGLYAQEKVCRNEEQLISKLQEIELDDTLVKIFRKQAVFLLEAGPYSGLGEIIHRESVPMHTFAKYLFTSLLPHDAELAYKTALRAMRLRVLESTTPLGDMSRPHHIVSVVPNRYPRWFTLSHIESQQCELASTMLTAAKGDVQRLETVLESIQKNIHSSSHIFKLAQDAFKIATLMDNLPDITLLKVSLELGLQVMRMTLSTLNWRRREMVRWLVTCATEIGVYALDSIMQNWFTLFTPTEATSIVATTVMSNSTIVRLHLDCHQQEKLAGSARTLALQCAMKDPQNCALSALTLCEKDHIAFETAYQIVLDAATTSMSYSQLFTIARYMEHRGYPMRAYKLATLAMTHLNLSYNQDTHPAINDVLWACVLSHSLGKNELAVIIPLVVKSVKCATVLSDILRRCTLTTPGMVGLHGRRNSGKLMSLDKAPLRQLLDATIGAYINTTHSRLTHISPRHYSEFIEFLSKARETFLMAHDGHMQFSQFIDNLKQIYKGKKKLMMLVRERFG
SIO_010081: LOC116779989
subclass of: SO_0000673
so part of: LOC116779989
location: complement(join(3427034..3427896,3434439..3434520,3470509..3470672,3471169..3471326,3475895..3476030,3479219..3479479,3481620..3481766,3485939..3486085,3486363..3486539,3488076..3488255,3508230..3508380,3508907..3509055,3518276..3518632,3624663..3625191))
location: region:3427034-3625191:-1
so has part: feature:3624663-3625191:-1:exon
so has part: feature:3518276-3518632:-1:exon
so has part: feature:3508907-3509055:-1:exon
so has part: feature:3508230-3508380:-1:exon
so has part: feature:3488076-3488255:-1:exon
so has part: feature:3486363-3486539:-1:exon
so has part: feature:3485939-3486085:-1:exon
so has part: feature:3481620-3481766:-1:exon
so has part: feature:3479219-3479479:-1:exon
so has part: feature:3475895-3476030:-1:exon
so has part: feature:3471169-3471326:-1:exon
so has part: feature:3470509-3470672:-1:exon
so has part: feature:3434439-3434520:-1:exon
so has part: feature:3427034-3427896:-1:exon

XP_032530383.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3624663-3625191:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3518276-3518632:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3508907-3509055:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3508230-3508380:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3488076-3488255:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3486363-3486539:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3485939-3486085:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3481620-3481766:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3479219-3479479:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3475895-3476030:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3471169-3471326:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3470509-3470672:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3434439-3434520:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3427034-3427896:-1:exon

LOC116780010
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780010
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3767613..3769546
location: region:3767613-3769546:1
so has part: feature:3767613-3769546:1:exon
subclass of: SO_0000011

116780010
type: Gene
SIO_000068: ncbigene

position:3767613:1
position: 3767613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3769546:1
position: 3769546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3767613-3769546:1:exon

LOC116780010
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780010
product: uncharacterized LOC116780010
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004354283.1
SIO_010081: LOC116780010
subclass of: SO_0000673
so part of: LOC116780010
location: join(3767613..3767632,3769328..3769396,3769534..3769546)
location: region:3767613-3769546:1
so has part: feature:3767613-3767632:1:exon
so has part: feature:3769328-3769396:1:exon
so has part: feature:3769534-3769546:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3767613-3767632:1:exon

position:3767632:1
position: 3767632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3769328-3769396:1:exon

position:3769328:1
position: 3769328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3769396:1
position: 3769396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3769534-3769546:1:exon

position:3769534:1
position: 3769534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116780008
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780008
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3847081..3856093
location: region:3847081-3856093:1
so has part: feature:3847081-3856093:1:exon
subclass of: SO_0000011

116780008
type: Gene
SIO_000068: ncbigene

position:3847081:1
position: 3847081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3856093:1
position: 3856093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3847081-3856093:1:exon

LOC116780008
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780008
product: uncharacterized LOC116780008
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004354281.1
SIO_010081: LOC116780008
subclass of: SO_0000673
so part of: LOC116780008
location: join(3847081..3847173,3852731..3852735,3856082..3856093)
location: region:3847081-3856093:1
so has part: feature:3847081-3847173:1:exon
so has part: feature:3852731-3852735:1:exon
so has part: feature:3856082-3856093:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3847081-3847173:1:exon

position:3847173:1
position: 3847173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3852731-3852735:1:exon

position:3852731:1
position: 3852731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3852735:1
position: 3852735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3856082-3856093:1:exon

position:3856082:1
position: 3856082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116780012
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780012
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3959521..3970998)
location: region:3959521-3970998:-1
so has part: feature:3959521-3970998:-1:exon
subclass of: SO_0000011

116780012
type: Gene
SIO_000068: ncbigene

position:3959521:-1
position: 3959521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3970998:-1
position: 3970998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3959521-3970998:-1:exon

LOC116780012
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780012
product: uncharacterized LOC116780012
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004354285.1
SIO_010081: LOC116780012
subclass of: SO_0000673
so part of: LOC116780012
location: complement(join(3959521..3959587,3966631..3966633,3970968..3970998))
location: region:3959521-3970998:-1
so has part: feature:3970968-3970998:-1:exon
so has part: feature:3966631-3966633:-1:exon
so has part: feature:3959521-3959587:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3970968-3970998:-1:exon

position:3970968:-1
position: 3970968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3966631-3966633:-1:exon

position:3966631:-1
position: 3966631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3966633:-1
position: 3966633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3959521-3959587:-1:exon

position:3959587:-1
position: 3959587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116780096
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780096
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3980520..3980599
location: region:3980520-3980599:1
so has part: feature:3980520-3980599:1:exon
subclass of: SO_0000578

116780096
type: Gene
SIO_000068: ncbigene

position:3980520:1
position: 3980520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3980599:1
position: 3980599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3980520-3980599:1:exon

LOC116780096
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: snoRNA
gene: LOC116780096
product: small nucleolar RNA SNORD45
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00279
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004354328.1
SIO_010081: LOC116780096
subclass of: SO_0000673
so part of: LOC116780096
location: 3980520..3980599
location: region:3980520-3980599:1
so has part: feature:3980520-3980599:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3980520-3980599:1:exon

LOC116779970
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779970
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4130964..4418709)
location: region:4130964-4418709:-1
so has part: feature:4130964-4418709:-1:exon

116779970
type: Gene
SIO_000068: ncbigene

position:4130964:-1
position: 4130964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4418709:-1
position: 4418709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4130964-4418709:-1:exon

LOC116779970
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779970
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116779970
subclass of: SO_0000673
so part of: LOC116779970
location: complement(4130964..4131809)
location: region:4130964-4131809:-1
so has part: feature:4130964-4131809:-1:exon

position:4131809:-1
position: 4131809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4130964-4131809:-1:exon

LOC116779970
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779970
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116779970
subclass of: SO_0000673
so part of: LOC116779970
location: complement(4164514..4164753)
location: region:4164514-4164753:-1
so has part: feature:4164514-4164753:-1:exon

position:4164514:-1
position: 4164514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4164753:-1
position: 4164753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4164514-4164753:-1:exon

LOC116779970
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779970
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116779970
subclass of: SO_0000673
so part of: LOC116779970
location: complement(4166107..4166511)
location: region:4166107-4166511:-1
so has part: feature:4166107-4166511:-1:exon

position:4166107:-1
position: 4166107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4166511:-1
position: 4166511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4166107-4166511:-1:exon

LOC116779970
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779970
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116779970
subclass of: SO_0000673
so part of: LOC116779970
location: complement(4175628..4175703)
location: region:4175628-4175703:-1
so has part: feature:4175628-4175703:-1:exon

position:4175628:-1
position: 4175628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4175703:-1
position: 4175703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4175628-4175703:-1:exon

LOC116779970
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779970
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116779970
subclass of: SO_0000673
so part of: LOC116779970
location: complement(4175927..4176060)
location: region:4175927-4176060:-1
so has part: feature:4175927-4176060:-1:exon

position:4175927:-1
position: 4175927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4176060:-1
position: 4176060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4175927-4176060:-1:exon

LOC116779970
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779970
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116779970
subclass of: SO_0000673
so part of: LOC116779970
location: complement(4176311..4176416)
location: region:4176311-4176416:-1
so has part: feature:4176311-4176416:-1:exon

position:4176311:-1
position: 4176311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4176416:-1
position: 4176416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4176311-4176416:-1:exon

LOC116779970
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779970
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116779970
subclass of: SO_0000673
so part of: LOC116779970
location: complement(4184783..4184996)
location: region:4184783-4184996:-1
so has part: feature:4184783-4184996:-1:exon

position:4184783:-1
position: 4184783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4184996:-1
position: 4184996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4184783-4184996:-1:exon

LOC116780078
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780078
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4229765..4286824
location: region:4229765-4286824:1
so has part: feature:4229765-4286824:1:exon
subclass of: SO_0000010

116780078
type: Gene
SIO_000068: ncbigene

position:4229765:1
position: 4229765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4286824:1
position: 4286824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4229765-4286824:1:exon

LOC116780078
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116780078
product: zinc finger protein 239-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 68% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674565.1
SIO_010081: LOC116780078
subclass of: SO_0000673
so part of: LOC116780078
location: join(4229765..4229861,4232584..4232636,4232751..4233250,4285935..4286207,4286334..4286824)
location: region:4229765-4286824:1
so has part: feature:4229765-4229861:1:exon
so has part: feature:4232584-4232636:1:exon
so has part: feature:4232751-4233250:1:exon
so has part: feature:4285935-4286207:1:exon
so has part: feature:4286334-4286824:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4229765-4229861:1:exon

position:4229861:1
position: 4229861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4232584-4232636:1:exon

position:4232584:1
position: 4232584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4232636:1
position: 4232636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4232751-4233250:1:exon

position:4232751:1
position: 4232751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4233250:1
position: 4233250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4285935-4286207:1:exon

position:4285935:1
position: 4285935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4286207:1
position: 4286207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4286334-4286824:1:exon

position:4286334:1
position: 4286334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116780078
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116780078
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 239-like
translation: MAARSTFVCETWWGMRRERDSGDPLGGYGERGCTELRTESTEDKSPQENLERPSLWQEDRRSLKGSPNLVVPDQPPNREKPFKCLECGKSFSQSTDLIRHQQIHTGERTYTCGECGKSFRSNSNLIQHQSIHTGEQPYKCIECGKTFRTRSRLLMHEQTHTGERPFRCTNCGKSFKQNYTLVTHRGIHTGERPYKCGECGKSFTQSSNLTSHQRTHCREKPFRCLECGKNFRKSSHLLTHQHTHTGVLPYMCGECGKSFSQSSTLCKHQHIHTGECPYTCGECGKSFRDNSTLRTGERPYKCLDCGKSFTQSGALTRHQQTHQ
SIO_010081: LOC116780078
subclass of: SO_0000673
so part of: LOC116780078
location: join(4229765..4229861,4232584..4232636,4232751..4233250,4285935..4286207,4286334..4286382)
location: region:4229765-4286382:1
so has part: feature:4229765-4229861:1:exon
so has part: feature:4232584-4232636:1:exon
so has part: feature:4232751-4233250:1:exon
so has part: feature:4285935-4286207:1:exon
so has part: feature:4286334-4286382:1:exon

XP_032530456.1
type: Protein
SIO_000068: ncbiprotein

position:4286382:1
position: 4286382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4229765-4229861:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4232584-4232636:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4232751-4233250:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4285935-4286207:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4286334-4286382:1:exon

LOC116779993
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779993
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4246549..4252116
location: region:4246549-4252116:1
so has part: feature:4246549-4252116:1:exon
subclass of: SO_0000010

116779993
type: Gene
SIO_000068: ncbigene

position:4246549:1
position: 4246549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4252116:1
position: 4252116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4246549-4252116:1:exon

LOC116779993
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779993
product: syncytin-A-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032674499.1
SIO_010081: LOC116779993
subclass of: SO_0000673
so part of: LOC116779993
location: join(4246549..4246818,4250581..4252116)
location: region:4246549-4252116:1
so has part: feature:4246549-4246818:1:exon
so has part: feature:4250581-4252116:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4246549-4246818:1:exon

position:4246818:1
position: 4246818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4250581-4252116:1:exon

position:4250581:1
position: 4250581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116779993
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779993
product: syncytin-A-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032674500.1
SIO_010081: LOC116779993
subclass of: SO_0000673
so part of: LOC116779993
location: join(4246549..4246818,4250595..4252116)
location: region:4246549-4252116:1
so has part: feature:4246549-4246818:1:exon
so has part: feature:4250595-4252116:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4246549-4246818:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4250595-4252116:1:exon

position:4250595:1
position: 4250595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116779993
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779993
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syncytin-A-like
translation: MMMMWNRLLVLCILFVQPVTMNRVWDQKLHVALVQNVSKILRKTECWICTQVPAIDDENSEWPLIGILLNETNFGKSMMNFPGTWKPVTEAYYPVALSNVISNQDVVPCMIINATGEIILPPHCDKNNSKEEINPEIVAGMAQFPLRLIPPQGSGWYWICEKEAWKVLPLDKDRACALGAVIPNITILDPIDEQEWKKPYPKRAKRTSNPLIERPTIFHSIVRALVPSLGVSELEKAIVNISAVMENIQDHTLDAIETLKEQFQSLSRVVIQNRMALNFLLASQGGVCKVINTSCCSYIDQTGRINNDLAAIRNQTKILHQISLDDVSLGLGDVLHKLTSWLPNWTWMRQLFILVLYILSVSVIAHCMHRCYSCCRCR
SIO_010081: LOC116779993
subclass of: SO_0000673
so part of: LOC116779993
location: 4250851..4251987
location: region:4250851-4251987:1
so has part: feature:4250851-4251987:1:exon

XP_032530390.1
type: Protein
SIO_000068: ncbiprotein

position:4250851:1
position: 4250851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4251987:1
position: 4251987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4250851-4251987:1:exon

LOC116779993
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779993
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syncytin-A-like
translation: MMMMWNRLLVLCILFVQPVTMNRVWDQKLHVALVQNVSKILRKTECWICTQVPAIDDENSEWPLIGILLNETNFGKSMMNFPGTWKPVTEAYYPVALSNVISNQDVVPCMIINATGEIILPPHCDKNNSKEEINPEIVAGMAQFPLRLIPPQGSGWYWICEKEAWKVLPLDKDRACALGAVIPNITILDPIDEQEWKKPYPKRAKRTSNPLIERPTIFHSIVRALVPSLGVSELEKAIVNISAVMENIQDHTLDAIETLKEQFQSLSRVVIQNRMALNFLLASQGGVCKVINTSCCSYIDQTGRINNDLAAIRNQTKILHQISLDDVSLGLGDVLHKLTSWLPNWTWMRQLFILVLYILSVSVIAHCMHRCYSCCRCR
SIO_010081: LOC116779993
subclass of: SO_0000673
so part of: LOC116779993
location: 4250851..4251987
location: region:4250851-4251987:1
so has part: feature:4250851-4251987:1:exon

XP_032530391.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4250851-4251987:1:exon

LOC116779958
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779958
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4399314..4401193
location: region:4399314-4401193:1
so has part: feature:4399314-4401193:1:exon

116779958
type: Gene
SIO_000068: ncbigene

position:4399314:1
position: 4399314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4401193:1
position: 4401193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4399314-4401193:1:exon

LOC116779958
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779958
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 42% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116779958
subclass of: SO_0000673
so part of: LOC116779958
location: 4399314..4399463
location: region:4399314-4399463:1
so has part: feature:4399314-4399463:1:exon

position:4399463:1
position: 4399463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4399314-4399463:1:exon

LOC116779958
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779958
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 42% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116779958
subclass of: SO_0000673
so part of: LOC116779958
location: 4400364..4401193
location: region:4400364-4401193:1
so has part: feature:4400364-4401193:1:exon

position:4400364:1
position: 4400364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4400364-4401193:1:exon

LOC116779970
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779970
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116779970
subclass of: SO_0000673
so part of: LOC116779970
location: complement(4417758..4418709)
location: region:4417758-4418709:-1
so has part: feature:4417758-4418709:-1:exon

position:4417758:-1
position: 4417758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4417758-4418709:-1:exon

LOC116780002
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780002
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4429212..4436361)
location: region:4429212-4436361:-1
so has part: feature:4429212-4436361:-1:exon
subclass of: SO_0000011

116780002
type: Gene
SIO_000068: ncbigene

position:4429212:-1
position: 4429212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4436361:-1
position: 4436361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4429212-4436361:-1:exon

LOC116780002
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780002
product: uncharacterized LOC116780002
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004354275.1
SIO_010081: LOC116780002
subclass of: SO_0000673
so part of: LOC116780002
location: complement(join(4429212..4429348,4433070..4433249,4436323..4436361))
location: region:4429212-4436361:-1
so has part: feature:4436323-4436361:-1:exon
so has part: feature:4433070-4433249:-1:exon
so has part: feature:4429212-4429348:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4436323-4436361:-1:exon

position:4436323:-1
position: 4436323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4433070-4433249:-1:exon

position:4433070:-1
position: 4433070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4433249:-1
position: 4433249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4429212-4429348:-1:exon

position:4429348:-1
position: 4429348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116779971
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779971
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4441977..4447540)
location: region:4441977-4447540:-1
so has part: feature:4441977-4447540:-1:exon

116779971
type: Gene
SIO_000068: ncbigene

position:4441977:-1
position: 4441977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4447540:-1
position: 4447540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4441977-4447540:-1:exon

LOC116779971
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779971
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 51% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116779971
subclass of: SO_0000673
so part of: LOC116779971
location: complement(4441977..4442985)
location: region:4441977-4442985:-1
so has part: feature:4441977-4442985:-1:exon

position:4442985:-1
position: 4442985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4441977-4442985:-1:exon

LOC116779971
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779971
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 51% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116779971
subclass of: SO_0000673
so part of: LOC116779971
location: complement(4443161..4443213)
location: region:4443161-4443213:-1
so has part: feature:4443161-4443213:-1:exon

position:4443161:-1
position: 4443161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4443213:-1
position: 4443213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4443161-4443213:-1:exon

LOC116779971
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779971
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 51% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116779971
subclass of: SO_0000673
so part of: LOC116779971
location: complement(4443822..4444004)
location: region:4443822-4444004:-1
so has part: feature:4443822-4444004:-1:exon

position:4443822:-1
position: 4443822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4444004:-1
position: 4444004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4443822-4444004:-1:exon

LOC116779971
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779971
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 51% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116779971
subclass of: SO_0000673
so part of: LOC116779971
location: complement(4445054..4445128)
location: region:4445054-4445128:-1
so has part: feature:4445054-4445128:-1:exon

position:4445054:-1
position: 4445054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4445128:-1
position: 4445128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4445054-4445128:-1:exon

LOC116779971
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779971
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 51% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116779971
subclass of: SO_0000673
so part of: LOC116779971
location: complement(4447524..4447540)
location: region:4447524-4447540:-1
so has part: feature:4447524-4447540:-1:exon

position:4447524:-1
position: 4447524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4447524-4447540:-1:exon

LOC116779994
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779994
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4478595..4499870)
location: region:4478595-4499870:-1
so has part: feature:4478595-4499870:-1:exon
subclass of: SO_0000010

116779994
type: Gene
SIO_000068: ncbigene

position:4478595:-1
position: 4478595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4499870:-1
position: 4499870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4478595-4499870:-1:exon

LOC116779994
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779994
product: cyclin-dependent kinase 7-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674501.1
SIO_010081: LOC116779994
subclass of: SO_0000673
so part of: LOC116779994
location: complement(join(4478595..4478649,4483998..4484145,4486994..4487143,4488822..4488908,4489804..4489903,4490953..4491071,4492179..4492289,4499826..4499870))
location: region:4478595-4499870:-1
so has part: feature:4499826-4499870:-1:exon
so has part: feature:4492179-4492289:-1:exon
so has part: feature:4490953-4491071:-1:exon
so has part: feature:4489804-4489903:-1:exon
so has part: feature:4488822-4488908:-1:exon
so has part: feature:4486994-4487143:-1:exon
so has part: feature:4483998-4484145:-1:exon
so has part: feature:4478595-4478649:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4499826-4499870:-1:exon

position:4499826:-1
position: 4499826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4492179-4492289:-1:exon

position:4492179:-1
position: 4492179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4492289:-1
position: 4492289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4490953-4491071:-1:exon

position:4490953:-1
position: 4490953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4491071:-1
position: 4491071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4489804-4489903:-1:exon

position:4489804:-1
position: 4489804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4489903:-1
position: 4489903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4488822-4488908:-1:exon

position:4488822:-1
position: 4488822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4488908:-1
position: 4488908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4486994-4487143:-1:exon

position:4486994:-1
position: 4486994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4487143:-1
position: 4487143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4483998-4484145:-1:exon

position:4483998:-1
position: 4483998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4484145:-1
position: 4484145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4478595-4478649:-1:exon

position:4478649:-1
position: 4478649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116779994
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779994
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinase 7-like
translation: METDLEVIIKDTSIVLTQSHIKAYMLMTLQGLEYLHHHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNKVYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGAPTEEQWPGMTSLPDYVTFKSFPGMPLQHIFNAAGDDLLNLLQGLFTFNPCTRVTVTQALKQKYFSNQPGPTPGNQLPRPNGPAEAVKEQQNALLNLKRKKPEGIDQGLRKKLMF
SIO_010081: LOC116779994
subclass of: SO_0000673
so part of: LOC116779994
location: complement(join(4478624..4478649,4483998..4484145,4486994..4487143,4488822..4488908,4489804..4489903,4490953..4491071,4492179..4492289,4499826..4499843))
location: region:4478624-4499843:-1
so has part: feature:4499826-4499843:-1:exon
so has part: feature:4492179-4492289:-1:exon
so has part: feature:4490953-4491071:-1:exon
so has part: feature:4489804-4489903:-1:exon
so has part: feature:4488822-4488908:-1:exon
so has part: feature:4486994-4487143:-1:exon
so has part: feature:4483998-4484145:-1:exon
so has part: feature:4478624-4478649:-1:exon

XP_032530392.1
type: Protein
SIO_000068: ncbiprotein

position:4478624:-1
position: 4478624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4499843:-1
position: 4499843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4499826-4499843:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4492179-4492289:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4490953-4491071:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4489804-4489903:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4488822-4488908:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4486994-4487143:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4483998-4484145:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4478624-4478649:-1:exon

LOC116780001
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780001
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4503464..4517431)
location: region:4503464-4517431:-1
so has part: feature:4503464-4517431:-1:exon
subclass of: SO_0000011

116780001
type: Gene
SIO_000068: ncbigene

position:4503464:-1
position: 4503464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4517431:-1
position: 4517431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4503464-4517431:-1:exon

LOC116780001
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780001
product: uncharacterized LOC116780001
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004354274.1
SIO_010081: LOC116780001
subclass of: SO_0000673
so part of: LOC116780001
location: complement(join(4503464..4503583,4504091..4504124,4517132..4517191,4517338..4517431))
location: region:4503464-4517431:-1
so has part: feature:4517338-4517431:-1:exon
so has part: feature:4517132-4517191:-1:exon
so has part: feature:4504091-4504124:-1:exon
so has part: feature:4503464-4503583:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4517338-4517431:-1:exon

position:4517338:-1
position: 4517338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4517132-4517191:-1:exon

position:4517132:-1
position: 4517132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4517191:-1
position: 4517191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4504091-4504124:-1:exon

position:4504091:-1
position: 4504091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4504124:-1
position: 4504124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4503464-4503583:-1:exon

position:4503583:-1
position: 4503583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116780003
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780003
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4507127..4509603
location: region:4507127-4509603:1
so has part: feature:4507127-4509603:1:exon
subclass of: SO_0000011

116780003
type: Gene
SIO_000068: ncbigene

position:4507127:1
position: 4507127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4509603:1
position: 4509603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4507127-4509603:1:exon

LOC116780003
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780003
product: uncharacterized LOC116780003
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004354276.1
SIO_010081: LOC116780003
subclass of: SO_0000673
so part of: LOC116780003
location: join(4507127..4507225,4508334..4508452,4509502..4509603)
location: region:4507127-4509603:1
so has part: feature:4507127-4507225:1:exon
so has part: feature:4508334-4508452:1:exon
so has part: feature:4509502-4509603:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4507127-4507225:1:exon

position:4507225:1
position: 4507225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4508334-4508452:1:exon

position:4508334:1
position: 4508334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4508452:1
position: 4508452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4509502-4509603:1:exon

position:4509502:1
position: 4509502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116780011
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780011
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4510511..4515281
location: region:4510511-4515281:1
so has part: feature:4510511-4515281:1:exon
subclass of: SO_0000011

116780011
type: Gene
SIO_000068: ncbigene

position:4510511:1
position: 4510511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4515281:1
position: 4515281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4510511-4515281:1:exon

LOC116780011
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780011
product: uncharacterized LOC116780011
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004354284.1
SIO_010081: LOC116780011
subclass of: SO_0000673
so part of: LOC116780011
location: join(4510511..4510583,4512262..4512411,4515261..4515281)
location: region:4510511-4515281:1
so has part: feature:4510511-4510583:1:exon
so has part: feature:4512262-4512411:1:exon
so has part: feature:4515261-4515281:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4510511-4510583:1:exon

position:4510583:1
position: 4510583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4512262-4512411:1:exon

position:4512262:1
position: 4512262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4512411:1
position: 4512411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4515261-4515281:1:exon

position:4515261:1
position: 4515261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116780005
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780005
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4519576..4537671)
location: region:4519576-4537671:-1
so has part: feature:4519576-4537671:-1:exon
subclass of: SO_0000011

116780005
type: Gene
SIO_000068: ncbigene

position:4519576:-1
position: 4519576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4537671:-1
position: 4537671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4519576-4537671:-1:exon

LOC116780005
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780005
product: uncharacterized LOC116780005
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004354278.1
SIO_010081: LOC116780005
subclass of: SO_0000673
so part of: LOC116780005
location: complement(join(4519576..4519673,4522319..4522321,4537662..4537671))
location: region:4519576-4537671:-1
so has part: feature:4537662-4537671:-1:exon
so has part: feature:4522319-4522321:-1:exon
so has part: feature:4519576-4519673:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4537662-4537671:-1:exon

position:4537662:-1
position: 4537662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4522319-4522321:-1:exon

position:4522319:-1
position: 4522319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4522321:-1
position: 4522321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4519576-4519673:-1:exon

position:4519673:-1
position: 4519673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116780014
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780014
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4613458..4614365
location: region:4613458-4614365:1
so has part: feature:4613458-4614365:1:exon
subclass of: SO_0000011

116780014
type: Gene
SIO_000068: ncbigene

position:4613458:1
position: 4613458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4614365:1
position: 4614365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4613458-4614365:1:exon

LOC116780014
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780014
product: uncharacterized LOC116780014
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004354286.1
SIO_010081: LOC116780014
subclass of: SO_0000673
so part of: LOC116780014
location: join(4613458..4613535,4614246..4614250,4614352..4614365)
location: region:4613458-4614365:1
so has part: feature:4613458-4613535:1:exon
so has part: feature:4614246-4614250:1:exon
so has part: feature:4614352-4614365:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4613458-4613535:1:exon

position:4613535:1
position: 4613535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4614246-4614250:1:exon

position:4614246:1
position: 4614246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4614250:1
position: 4614250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4614352-4614365:1:exon

position:4614352:1
position: 4614352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116780006
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780006
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4728272..4748919
location: region:4728272-4748919:1
so has part: feature:4728272-4748919:1:exon
subclass of: SO_0000011

116780006
type: Gene
SIO_000068: ncbigene

position:4728272:1
position: 4728272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4748919:1
position: 4748919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4728272-4748919:1:exon

LOC116780006
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780006
product: uncharacterized LOC116780006
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004354279.1
SIO_010081: LOC116780006
subclass of: SO_0000673
so part of: LOC116780006
location: join(4728272..4728349,4729739..4729740,4744623..4744631,4748910..4748919)
location: region:4728272-4748919:1
so has part: feature:4728272-4728349:1:exon
so has part: feature:4729739-4729740:1:exon
so has part: feature:4744623-4744631:1:exon
so has part: feature:4748910-4748919:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4728272-4728349:1:exon

position:4728349:1
position: 4728349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4729739-4729740:1:exon

position:4729739:1
position: 4729739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4729740:1
position: 4729740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4744623-4744631:1:exon

position:4744623:1
position: 4744623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4744631:1
position: 4744631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4748910-4748919:1:exon

position:4748910:1
position: 4748910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116779992
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779992
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4959662..4975448
location: region:4959662-4975448:1
so has part: feature:4959662-4975448:1:exon
subclass of: SO_0000010

116779992
type: Gene
SIO_000068: ncbigene

position:4959662:1
position: 4959662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4975448:1
position: 4975448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4959662-4975448:1:exon

LOC116779992
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779992
product: mothers against decapentaplegic homolog 4-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 long SRA read, 16 Proteins, and 33% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674497.1
SIO_010081: LOC116779992
subclass of: SO_0000673
so part of: LOC116779992
location: join(4959662..4960027,4960920..4961094,4961516..4961545,4964189..4964404,4966161..4966280,4966413..4966523,4968285..4968335,4971474..4971657,4972561..4972729,4973892..4974030,4975237..4975448)
location: region:4959662-4975448:1
so has part: feature:4959662-4960027:1:exon
so has part: feature:4960920-4961094:1:exon
so has part: feature:4961516-4961545:1:exon
so has part: feature:4964189-4964404:1:exon
so has part: feature:4966161-4966280:1:exon
so has part: feature:4966413-4966523:1:exon
so has part: feature:4968285-4968335:1:exon
so has part: feature:4971474-4971657:1:exon
so has part: feature:4972561-4972729:1:exon
so has part: feature:4973892-4974030:1:exon
so has part: feature:4975237-4975448:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4959662-4960027:1:exon

position:4960027:1
position: 4960027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4960920-4961094:1:exon

position:4960920:1
position: 4960920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4961094:1
position: 4961094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4961516-4961545:1:exon

position:4961516:1
position: 4961516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4961545:1
position: 4961545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4964189-4964404:1:exon

position:4964189:1
position: 4964189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4964404:1
position: 4964404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4966161-4966280:1:exon

position:4966161:1
position: 4966161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4966280:1
position: 4966280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4966413-4966523:1:exon

position:4966413:1
position: 4966413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4966523:1
position: 4966523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4968285-4968335:1:exon

position:4968285:1
position: 4968285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4968335:1
position: 4968335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4971474-4971657:1:exon

position:4971474:1
position: 4971474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4971657:1
position: 4971657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4972561-4972729:1:exon

position:4972561:1
position: 4972561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4972729:1
position: 4972729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4973892-4974030:1:exon

position:4973892:1
position: 4973892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4974030:1
position: 4974030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4975237-4975448:1:exon

position:4975237:1
position: 4975237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116779992
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779992
product: mothers against decapentaplegic homolog 4-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 long SRA read, 4 Proteins, and 31% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674498.1
SIO_010081: LOC116779992
subclass of: SO_0000673
so part of: LOC116779992
location: join(4959662..4960027,4960920..4961094,4961516..4961545,4964189..4964404,4966413..4966523,4968285..4968335,4971474..4971657,4972561..4972729,4973892..4974030,4975237..4975448)
location: region:4959662-4975448:1
so has part: feature:4959662-4960027:1:exon
so has part: feature:4960920-4961094:1:exon
so has part: feature:4961516-4961545:1:exon
so has part: feature:4964189-4964404:1:exon
so has part: feature:4966413-4966523:1:exon
so has part: feature:4968285-4968335:1:exon
so has part: feature:4971474-4971657:1:exon
so has part: feature:4972561-4972729:1:exon
so has part: feature:4973892-4974030:1:exon
so has part: feature:4975237-4975448:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4959662-4960027:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4960920-4961094:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4961516-4961545:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4964189-4964404:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4966413-4966523:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4968285-4968335:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4971474-4971657:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4972561-4972729:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4973892-4974030:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4975237-4975448:1:exon

LOC116779992
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779992
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mothers against decapentaplegic homolog 4-like isoform X1
translation: MDNMSITNTPTSNDACLSIVHSLMCHRQGGESETFAKRAIESLVKKLKEKKDELDSLITAITTNGAHPSKCVTIQRTLDGRLQVAGRKGFPHVIYARLWRWPDLHKNELKHVKYCQYAFDLKCDSVCVNPYHYERVVSPGIDLSGLTLQSSAPSNMLVKDEYVHDYEGQPSLSSAEGHSVQTIQHPPSNRASTEPYSTPAMLVPTEASTTSTTNFPNIPVASTSQPTSILTGSHSDGLLQIASGPQPGTQQNGFTAQTATYHHNSTTTWTGSRTAAYTPTIPHHQNGHLQHHPPMHPGHYWPVHNELAFQPPISNHPAPDYWCSIAYFEMDVQVGETFKVPSSCPIVTVDGYVDPSGGDRFCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVWVRCLSDHAVFVQSYYLDREAGRAPGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAAAAAQAAAVAGNIPGPGSVGGIAPAISLSAAAGIGVDDLRRLCILRMSFVKGWGPDYPRQSIKETPCWIEIHLHRALQLLDEVLHTMPIADPQPLD
SIO_010081: LOC116779992
subclass of: SO_0000673
so part of: LOC116779992
location: join(4959779..4960027,4960920..4961094,4961516..4961545,4964189..4964404,4966161..4966280,4966413..4966523,4968285..4968335,4971474..4971657,4972561..4972729,4973892..4974030,4975237..4975448)
location: region:4959779-4975448:1
so has part: feature:4959779-4960027:1:exon
so has part: feature:4960920-4961094:1:exon
so has part: feature:4961516-4961545:1:exon
so has part: feature:4964189-4964404:1:exon
so has part: feature:4966161-4966280:1:exon
so has part: feature:4966413-4966523:1:exon
so has part: feature:4968285-4968335:1:exon
so has part: feature:4971474-4971657:1:exon
so has part: feature:4972561-4972729:1:exon
so has part: feature:4973892-4974030:1:exon
so has part: feature:4975237-4975448:1:exon

XP_032530388.1
type: Protein
SIO_000068: ncbiprotein

position:4959779:1
position: 4959779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4959779-4960027:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4960920-4961094:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4961516-4961545:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4964189-4964404:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4966161-4966280:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4966413-4966523:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4968285-4968335:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4971474-4971657:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4972561-4972729:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4973892-4974030:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4975237-4975448:1:exon

LOC116779992
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779992
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mothers against decapentaplegic homolog 4-like isoform X2
translation: MDNMSITNTPTSNDACLSIVHSLMCHRQGGESETFAKRAIESLVKKLKEKKDELDSLITAITTNGAHPSKCVTIQRTLDGRLQVAGRKGFPHVIYARLWRWPDLHKNELKHVKYCQYAFDLKCDSVCVNPYHYERVVSPGIDLSGLTLQSSAPSNMLVKDEYVHDYEGQPSLSSAEGHSVQTIQHPPSNRASTEPYSTPAMLVPTEASTTSTTNFPNIPVASTNSTTTWTGSRTAAYTPTIPHHQNGHLQHHPPMHPGHYWPVHNELAFQPPISNHPAPDYWCSIAYFEMDVQVGETFKVPSSCPIVTVDGYVDPSGGDRFCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVWVRCLSDHAVFVQSYYLDREAGRAPGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAAAAAQAAAVAGNIPGPGSVGGIAPAISLSAAAGIGVDDLRRLCILRMSFVKGWGPDYPRQSIKETPCWIEIHLHRALQLLDEVLHTMPIADPQPLD
SIO_010081: LOC116779992
subclass of: SO_0000673
so part of: LOC116779992
location: join(4959779..4960027,4960920..4961094,4961516..4961545,4964189..4964404,4966413..4966523,4968285..4968335,4971474..4971657,4972561..4972729,4973892..4974030,4975237..4975448)
location: region:4959779-4975448:1
so has part: feature:4959779-4960027:1:exon
so has part: feature:4960920-4961094:1:exon
so has part: feature:4961516-4961545:1:exon
so has part: feature:4964189-4964404:1:exon
so has part: feature:4966413-4966523:1:exon
so has part: feature:4968285-4968335:1:exon
so has part: feature:4971474-4971657:1:exon
so has part: feature:4972561-4972729:1:exon
so has part: feature:4973892-4974030:1:exon
so has part: feature:4975237-4975448:1:exon

XP_032530389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4959779-4960027:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4960920-4961094:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4961516-4961545:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4964189-4964404:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4966413-4966523:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4968285-4968335:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4971474-4971657:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4972561-4972729:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4973892-4974030:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4975237-4975448:1:exon

MEX3C
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: MEX3C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4985202..5002885)
location: region:4985202-5002885:-1
so has part: feature:4985202-5002885:-1:exon
subclass of: SO_0000010

116779973
type: Gene
SIO_000068: ncbigene

position:4985202:-1
position: 4985202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5002885:-1
position: 5002885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4985202-5002885:-1:exon

MEX3C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: MEX3C
product: mex-3 RNA binding family member C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 7% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032674478.1
SIO_010081: MEX3C
subclass of: SO_0000673
so part of: MEX3C
location: complement(join(4985202..4986427,5002300..5002885))
location: region:4985202-5002885:-1
so has part: feature:5002300-5002885:-1:exon
so has part: feature:4985202-4986427:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5002300-5002885:-1:exon

position:5002300:-1
position: 5002300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4985202-4986427:-1:exon

position:4986427:-1
position: 4986427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MEX3C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: MEX3C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding E3 ubiquitin-protein ligase MEX3C
translation: MPSSSAAAASRAAEPAEPPRLPPPSLSLLQQRLSGLGVRDHGLPARGSGVGGVAQWRADLAPPPDLPGEPRPGGAGEAAAGDEGDLELEEDEDDEDHLAALLLLSSSSSSSQSLPLLPALGSVLLSPAFDAQEALVGPHDPQGTMAAMMSHAYDGGGAVGLSGEQTALLRRKSVNTTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEESIFVVTGRKEDVAMAKREILSAAEHFSMIRASRNKNGPALGGLPCTPNLPGQMTVQVRVPYHVVGLVVGPKGATIKRIQQQTHTYIVTPSRDMEPVFEVTGMPENVDRAREEIEMHIAMRTGSYIKLNEKSDFHYNGTDVRFEGGTLRSAWLVSNPAPPSHTRMISNYMNDSSSSLGSGSTDSYFGSNRLTDFSPTSPFSTGNFWFGETLPSVSTEDLAVDSPVYDSLPMPSQTIWTPFEPVNPLCGFGSDSVSNAKPQRQGSQPSTPCLSPTFPESLDHPLARRVWSDPPSAGHQAGLPIYISAFSNGTNSYSSSNGGSTSSSPPELRQKHDCVICFESEVIAALVPCGHNLFCLECANKICEKETPLCPVCQAAVTQSIQIHS
SIO_010081: MEX3C
subclass of: SO_0000673
so part of: MEX3C
location: complement(join(4985202..4986427,5002300..5002885))
location: region:4985202-5002885:-1
so has part: feature:5002300-5002885:-1:exon
so has part: feature:4985202-4986427:-1:exon

XP_032530369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5002300-5002885:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4985202-4986427:-1:exon

LOC116779974
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779974
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5029301..5066372
location: region:5029301-5066372:1
so has part: feature:5029301-5066372:1:exon

116779974
type: Gene
SIO_000068: ncbigene

position:5029301:1
position: 5029301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5066372:1
position: 5066372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5029301-5066372:1:exon

LOC116779974
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779974
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
pseudo: true
SIO_010081: LOC116779974
subclass of: SO_0000673
so part of: LOC116779974
location: 5029301..5029444
location: region:5029301-5029444:1
so has part: feature:5029301-5029444:1:exon

position:5029444:1
position: 5029444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5029301-5029444:1:exon

LOC116779974
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779974
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
pseudo: true
SIO_010081: LOC116779974
subclass of: SO_0000673
so part of: LOC116779974
location: 5031254..5031318
location: region:5031254-5031318:1
so has part: feature:5031254-5031318:1:exon

position:5031254:1
position: 5031254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5031318:1
position: 5031318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5031254-5031318:1:exon

LOC116779974
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779974
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
pseudo: true
SIO_010081: LOC116779974
subclass of: SO_0000673
so part of: LOC116779974
location: 5031474..5031700
location: region:5031474-5031700:1
so has part: feature:5031474-5031700:1:exon

position:5031474:1
position: 5031474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5031700:1
position: 5031700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5031474-5031700:1:exon

LOC116779974
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779974
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
pseudo: true
SIO_010081: LOC116779974
subclass of: SO_0000673
so part of: LOC116779974
location: 5034031..5035501
location: region:5034031-5035501:1
so has part: feature:5034031-5035501:1:exon

position:5034031:1
position: 5034031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5035501:1
position: 5035501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5034031-5035501:1:exon

LOC116779974
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779974
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
pseudo: true
SIO_010081: LOC116779974
subclass of: SO_0000673
so part of: LOC116779974
location: 5044086..5044852
location: region:5044086-5044852:1
so has part: feature:5044086-5044852:1:exon

position:5044086:1
position: 5044086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5044852:1
position: 5044852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5044086-5044852:1:exon

LOC116779974
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779974
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
pseudo: true
SIO_010081: LOC116779974
subclass of: SO_0000673
so part of: LOC116779974
location: 5065428..5066372
location: region:5065428-5066372:1
so has part: feature:5065428-5066372:1:exon

position:5065428:1
position: 5065428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5065428-5066372:1:exon

LOC116779975
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779975
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5238012..5251840)
location: region:5238012-5251840:-1
so has part: feature:5238012-5251840:-1:exon
subclass of: SO_0000010

116779975
type: Gene
SIO_000068: ncbigene

position:5238012:-1
position: 5238012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5251840:-1
position: 5251840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5238012-5251840:-1:exon

LOC116779975
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779975
product: sentrin-specific protease 5-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 51% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032674479.1
SIO_010081: LOC116779975
subclass of: SO_0000673
so part of: LOC116779975
location: complement(join(5238012..5238030,5251182..5251840))
location: region:5238012-5251840:-1
so has part: feature:5251182-5251840:-1:exon
so has part: feature:5238012-5238030:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5251182-5251840:-1:exon

position:5251182:-1
position: 5251182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5238012-5238030:-1:exon

position:5238030:-1
position: 5238030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116779975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779975
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: sentrin-specific protease 5-like
translation: MWLCEFLDEIMKECGSLIPLCKKDVLERLKEVFNEDFSHRKPFITKEIIMYWEKHPKLSTCNFRIFYNKHMLDMDYLATLEGQNWLNDQIINMYGELVMDAVPEKVNFFNSFFYTQLITKGYNGVKQWTKKVDLFKKTXLLIPIHLAVHWSLIAVNVPSXISFYDSQGIHFQFCVENIQQYLLTEAKEKNHPEFLQGWQTAVTKCIPQQKNDSDCGVFVLQALSGQ
SIO_010081: LOC116779975
subclass of: SO_0000673
so part of: LOC116779975
location: complement(join(5238012..5238030,5251182..5251840))
location: region:5238012-5251840:-1
so has part: feature:5251182-5251840:-1:exon
so has part: feature:5238012-5238030:-1:exon

XP_032530370.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5251182-5251840:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5238012-5238030:-1:exon

LOC116779976
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779976
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5252132..5264246)
location: region:5252132-5264246:-1
so has part: feature:5252132-5264246:-1:exon

116779976
type: Gene
SIO_000068: ncbigene

position:5252132:-1
position: 5252132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5264246:-1
position: 5264246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5252132-5264246:-1:exon

LOC116779976
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779976
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
pseudo: true
SIO_010081: LOC116779976
subclass of: SO_0000673
so part of: LOC116779976
location: complement(5252132..5252407)
location: region:5252132-5252407:-1
so has part: feature:5252132-5252407:-1:exon

position:5252407:-1
position: 5252407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5252132-5252407:-1:exon

LOC116779976
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779976
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
pseudo: true
SIO_010081: LOC116779976
subclass of: SO_0000673
so part of: LOC116779976
location: complement(5252964..5253435)
location: region:5252964-5253435:-1
so has part: feature:5252964-5253435:-1:exon

position:5252964:-1
position: 5252964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5253435:-1
position: 5253435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5252964-5253435:-1:exon

LOC116779976
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779976
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
pseudo: true
SIO_010081: LOC116779976
subclass of: SO_0000673
so part of: LOC116779976
location: complement(5264010..5264246)
location: region:5264010-5264246:-1
so has part: feature:5264010-5264246:-1:exon

position:5264010:-1
position: 5264010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5264010-5264246:-1:exon

LOC116779996
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779996
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5272176..5276413
location: region:5272176-5276413:1
so has part: feature:5272176-5276413:1:exon
subclass of: SO_0000010

116779996
type: Gene
SIO_000068: ncbigene

position:5272176:1
position: 5272176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5276413:1
position: 5276413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5272176-5276413:1:exon

LOC116779996
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779996
product: transmembrane emp24 domain-containing protein 7-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 23 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674515.1
SIO_010081: LOC116779996
subclass of: SO_0000673
so part of: LOC116779996
location: join(5272176..5272343,5273478..5273723,5276177..5276413)
location: region:5272176-5276413:1
so has part: feature:5272176-5272343:1:exon
so has part: feature:5273478-5273723:1:exon
so has part: feature:5276177-5276413:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5272176-5272343:1:exon

position:5272343:1
position: 5272343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5273478-5273723:1:exon

position:5273478:1
position: 5273478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5273723:1
position: 5273723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5276177-5276413:1:exon

position:5276177:1
position: 5276177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116779996
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779996
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane emp24 domain-containing protein 7-like
translation: MLLRGSGTAGPWGWLTLLLVACAAWASEITFELPDNAIQCFYEEIVQGTKCTLEFQVITGGHYDVDCRLEGPDGAVLYKEMKKQYDSFTFTASRNGTYKFCFSNEFSTFTHKTVYFDFQVGEDAPLFPSENRATALTQMESACVSIHEALKSVIDYQTHFRLREAQGRSRAEDLNTRVAYWSIGEAIILLVVSIGQVFLLKNFFSDKRTTTTRVAS
SIO_010081: LOC116779996
subclass of: SO_0000673
so part of: LOC116779996
location: join(5272176..5272343,5273478..5273723,5276177..5276413)
location: region:5272176-5276413:1
so has part: feature:5272176-5272343:1:exon
so has part: feature:5273478-5273723:1:exon
so has part: feature:5276177-5276413:1:exon

XP_032530406.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5272176-5272343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5273478-5273723:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5276177-5276413:1:exon

LOC116779977
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779977
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5291602..5293104)
location: region:5291602-5293104:-1
so has part: feature:5291602-5293104:-1:exon
subclass of: SO_0000010

116779977
type: Gene
SIO_000068: ncbigene

position:5291602:-1
position: 5291602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5293104:-1
position: 5293104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5291602-5293104:-1:exon

LOC116779977
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779977
product: uncharacterized LOC116779977
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674480.1
SIO_010081: LOC116779977
subclass of: SO_0000673
so part of: LOC116779977
location: complement(5291602..5293104)
location: region:5291602-5293104:-1
so has part: feature:5291602-5293104:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5291602-5293104:-1:exon

LOC116779977
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779977
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116779977
translation: MTPQVELYGDYSLLIVILGLELVFVGAVLGVFLRAVQKQKSAIQKSVSEVIKSFQESMRTLQDQLEKEAIQKSTGEVIRSLQESMKALQEQLGKERLQLTAERQALQREREINSLLRSALQDEEEQNERLKKILEMKNCELRDINSKYLKPVDVNKSLYPSGELEELKQSYPEDEVIHMRPLIKTETTGQGADRQTTTRITPYTGEALAKIQEKYSRKASESETEYVWRVSLTGGDRILLSEDEARGFWGPGVFLTTNDNRAPWPLTQRAAYWAGGLDPIERGDPHTIKTPTIGHIVESVQKAACLQLIHTRLLDSQRHSPMELEADPQRFPALIRGLPDALKTHAKQLQERIMTTPRPRRRGAPLGMTWLEVAQELVTTGRQLGVSDTSSVKQKTDIRRVGEIRKPPLPGSRQQNATPGERTRYSLWVEGIEKGIPREVMDKLPTANLEHLIKQWDKIKKHESPPGGNPPQESNTMVPSAPPEINLTNPELGNGTHRSQ
SIO_010081: LOC116779977
subclass of: SO_0000673
so part of: LOC116779977
location: complement(5291602..5293104)
location: region:5291602-5293104:-1
so has part: feature:5291602-5293104:-1:exon

XP_032530371.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5291602-5293104:-1:exon

LOC116779990
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779990
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5364304..5459518)
location: region:5364304-5459518:-1
so has part: feature:5364304-5459518:-1:exon
subclass of: SO_0000010

116779990
type: Gene
SIO_000068: ncbigene

position:5364304:-1
position: 5364304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5459518:-1
position: 5459518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5364304-5459518:-1:exon

LOC116779990
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779990
product: ras GTPase-activating protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 23% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674495.1
SIO_010081: LOC116779990
subclass of: SO_0000673
so part of: LOC116779990
location: complement(join(5364304..5364387,5366074..5366208,5367527..5367604,5370318..5370406,5382815..5382882,5385734..5385820,5395092..5395207,5395939..5396081,5396255..5396414,5396567..5396739,5400430..5400506,5400791..5400948,5403426..5403503,5405641..5405728,5408022..5408178,5410134..5410254,5412601..5412679,5421018..5421168,5422026..5422078,5425497..5425528,5426553..5426670,5430370..5430440,5431285..5431420,5433865..5434014,5459076..5459518))
location: region:5364304-5459518:-1
so has part: feature:5459076-5459518:-1:exon
so has part: feature:5433865-5434014:-1:exon
so has part: feature:5431285-5431420:-1:exon
so has part: feature:5430370-5430440:-1:exon
so has part: feature:5426553-5426670:-1:exon
so has part: feature:5425497-5425528:-1:exon
so has part: feature:5422026-5422078:-1:exon
so has part: feature:5421018-5421168:-1:exon
so has part: feature:5412601-5412679:-1:exon
so has part: feature:5410134-5410254:-1:exon
so has part: feature:5408022-5408178:-1:exon
so has part: feature:5405641-5405728:-1:exon
so has part: feature:5403426-5403503:-1:exon
so has part: feature:5400791-5400948:-1:exon
so has part: feature:5400430-5400506:-1:exon
so has part: feature:5396567-5396739:-1:exon
so has part: feature:5396255-5396414:-1:exon
so has part: feature:5395939-5396081:-1:exon
so has part: feature:5395092-5395207:-1:exon
so has part: feature:5385734-5385820:-1:exon
so has part: feature:5382815-5382882:-1:exon
so has part: feature:5370318-5370406:-1:exon
so has part: feature:5367527-5367604:-1:exon
so has part: feature:5366074-5366208:-1:exon
so has part: feature:5364304-5364387:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5459076-5459518:-1:exon

position:5459076:-1
position: 5459076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5433865-5434014:-1:exon

position:5433865:-1
position: 5433865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5434014:-1
position: 5434014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5431285-5431420:-1:exon

position:5431285:-1
position: 5431285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5431420:-1
position: 5431420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5430370-5430440:-1:exon

position:5430370:-1
position: 5430370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5430440:-1
position: 5430440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5426553-5426670:-1:exon

position:5426553:-1
position: 5426553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5426670:-1
position: 5426670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5425497-5425528:-1:exon

position:5425497:-1
position: 5425497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5425528:-1
position: 5425528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5422026-5422078:-1:exon

position:5422026:-1
position: 5422026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5422078:-1
position: 5422078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5421018-5421168:-1:exon

position:5421018:-1
position: 5421018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5421168:-1
position: 5421168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5412601-5412679:-1:exon

position:5412601:-1
position: 5412601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5412679:-1
position: 5412679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5410134-5410254:-1:exon

position:5410134:-1
position: 5410134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5410254:-1
position: 5410254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5408022-5408178:-1:exon

position:5408022:-1
position: 5408022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5408178:-1
position: 5408178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5405641-5405728:-1:exon

position:5405641:-1
position: 5405641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5405728:-1
position: 5405728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5403426-5403503:-1:exon

position:5403426:-1
position: 5403426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5403503:-1
position: 5403503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5400791-5400948:-1:exon

position:5400791:-1
position: 5400791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5400948:-1
position: 5400948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5400430-5400506:-1:exon

position:5400430:-1
position: 5400430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5400506:-1
position: 5400506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5396567-5396739:-1:exon

position:5396567:-1
position: 5396567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5396739:-1
position: 5396739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5396255-5396414:-1:exon

position:5396255:-1
position: 5396255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5396414:-1
position: 5396414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5395939-5396081:-1:exon

position:5395939:-1
position: 5395939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5396081:-1
position: 5396081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5395092-5395207:-1:exon

position:5395092:-1
position: 5395092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5395207:-1
position: 5395207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5385734-5385820:-1:exon

position:5385734:-1
position: 5385734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5385820:-1
position: 5385820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:5382815-5382882:-1:exon

position:5382815:-1
position: 5382815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5382882:-1
position: 5382882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:5370318-5370406:-1:exon

position:5370318:-1
position: 5370318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5370406:-1
position: 5370406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:5367527-5367604:-1:exon

position:5367527:-1
position: 5367527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5367604:-1
position: 5367604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:5366074-5366208:-1:exon

position:5366074:-1
position: 5366074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5366208:-1
position: 5366208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:5364304-5364387:-1:exon

position:5364387:-1
position: 5364387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116779990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779990
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras GTPase-activating protein 1-like
translation: MMAAEAEEGGSVTSAGLVGAVGGVESEHYPTLCQGKDLGSQGPFLLRSGGDSPGAGGPALCSALGLLALGSGPAPLVSRGAVSATVQGPEVSGGMLLPPKPSTVASPSPPPPSLVVGLGTMDEGDSLDGPEYEEEEVAIPLNAPPTNQWYHGKLDRAIAEERLWQAGKPGSYLIRESDWRPGSFVLSFLSKTSVNHFRIIAMCGDYYIGGRRFASLSDLIGYYSHVSCLLKGEKLFFPVAPPEPVEDRRRVRAILPYTKVPETDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVGREEDPHEGKIWFHGKISKQEAYNLLMTVGQMCSFLVRPSDNTPGDYSLYFRTSENIQRFKICPTSSNRFMMGGRYYNSIAEIIEHYRKEQIVEGYYLKDPVPMQHQEEVLNDTVDGKEIYNTIRHKTKDAFYKNIVKKGYLLKKSKGKRWKNLYFILEGNDAQLIYFESEKRATKPKGLIDLSVCSVYGVHDSLFGRPNCFQIVVQHFSEEHYIFYFAGETPEQIQDWMKALQMFCSLRKNSPGMSNKRLRQVSSLILHVEEAHTLPVKHFTNPYCNIYLNSVQVAKTHIREGQNPVWSEEFVFDDLSSDINRFEISLSNKTKKSKDPDILFMRCQLSRLQKGHATDEWFQLSSHIPLKGIEPGSLRVRVRYSMEKIMPEEEYSEFKELILQKEMHVVYALSHVCGQDRTLLAGILLKIFLHEKLESLLLRTLNDREISMEDEATTLFRATTLASTLMEQYMKATATRFVHHALKDSILKIMESKQSCELNPSKLEKNEDVNTNLAHLLSILSELVEKIFMAAEILPPTLRYIYGCLQKSVQNKWPANTTMRTRVVSGFVFLRLICPAILNPRMFNIISDSPSPTAARTLTLVAKSVQNLANLVEFGAKEPYMEGVNPFIKSNKHRMIMFLDELGNVPELPDTTENSRTDLSRYLAALHEMCVAHSDELRILSNERGVMQHVLKKLLAITELLQQKQHQYSLSNNIR
SIO_010081: LOC116779990
subclass of: SO_0000673
so part of: LOC116779990
location: complement(join(5364304..5364387,5366074..5366208,5367527..5367604,5370318..5370406,5382815..5382882,5385734..5385820,5395092..5395207,5395939..5396081,5396255..5396414,5396567..5396739,5400430..5400506,5400791..5400948,5403426..5403503,5405641..5405728,5408022..5408178,5410134..5410254,5412601..5412679,5421018..5421168,5422026..5422078,5425497..5425528,5426553..5426670,5430370..5430440,5431285..5431420,5433865..5434014,5459076..5459518))
location: region:5364304-5459518:-1
so has part: feature:5459076-5459518:-1:exon
so has part: feature:5433865-5434014:-1:exon
so has part: feature:5431285-5431420:-1:exon
so has part: feature:5430370-5430440:-1:exon
so has part: feature:5426553-5426670:-1:exon
so has part: feature:5425497-5425528:-1:exon
so has part: feature:5422026-5422078:-1:exon
so has part: feature:5421018-5421168:-1:exon
so has part: feature:5412601-5412679:-1:exon
so has part: feature:5410134-5410254:-1:exon
so has part: feature:5408022-5408178:-1:exon
so has part: feature:5405641-5405728:-1:exon
so has part: feature:5403426-5403503:-1:exon
so has part: feature:5400791-5400948:-1:exon
so has part: feature:5400430-5400506:-1:exon
so has part: feature:5396567-5396739:-1:exon
so has part: feature:5396255-5396414:-1:exon
so has part: feature:5395939-5396081:-1:exon
so has part: feature:5395092-5395207:-1:exon
so has part: feature:5385734-5385820:-1:exon
so has part: feature:5382815-5382882:-1:exon
so has part: feature:5370318-5370406:-1:exon
so has part: feature:5367527-5367604:-1:exon
so has part: feature:5366074-5366208:-1:exon
so has part: feature:5364304-5364387:-1:exon

XP_032530386.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5459076-5459518:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5433865-5434014:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5431285-5431420:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5430370-5430440:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5426553-5426670:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5425497-5425528:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5422026-5422078:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5421018-5421168:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5412601-5412679:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5410134-5410254:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5408022-5408178:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5405641-5405728:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5403426-5403503:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5400791-5400948:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5400430-5400506:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5396567-5396739:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5396255-5396414:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5395939-5396081:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5395092-5395207:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5385734-5385820:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5382815-5382882:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5370318-5370406:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5367527-5367604:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5366074-5366208:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5364304-5364387:-1:exon

LOC116779991
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779991
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5569863..5661688
location: region:5569863-5661688:1
so has part: feature:5569863-5661688:1:exon
subclass of: SO_0000010

116779991
type: Gene
SIO_000068: ncbigene

position:5569863:1
position: 5569863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5661688:1
position: 5661688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5569863-5661688:1:exon

LOC116779991
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779991
product: transportin-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674496.1
SIO_010081: LOC116779991
subclass of: SO_0000673
so part of: LOC116779991
location: join(5569863..5569985,5573481..5573556,5591955..5592104,5612438..5612544,5613077..5613210,5615936..5616017,5616711..5616833,5622402..5622520,5626480..5626540,5627202..5627373,5629562..5629714,5630849..5631074,5631994..5632165,5632552..5632638,5633416..5633523,5633734..5633892,5633988..5634075,5634980..5635078,5635292..5635387,5638185..5638260,5639129..5639228,5640683..5640757,5650251..5650393,5661642..5661688)
location: region:5569863-5661688:1
so has part: feature:5569863-5569985:1:exon
so has part: feature:5573481-5573556:1:exon
so has part: feature:5591955-5592104:1:exon
so has part: feature:5612438-5612544:1:exon
so has part: feature:5613077-5613210:1:exon
so has part: feature:5615936-5616017:1:exon
so has part: feature:5616711-5616833:1:exon
so has part: feature:5622402-5622520:1:exon
so has part: feature:5626480-5626540:1:exon
so has part: feature:5627202-5627373:1:exon
so has part: feature:5629562-5629714:1:exon
so has part: feature:5630849-5631074:1:exon
so has part: feature:5631994-5632165:1:exon
so has part: feature:5632552-5632638:1:exon
so has part: feature:5633416-5633523:1:exon
so has part: feature:5633734-5633892:1:exon
so has part: feature:5633988-5634075:1:exon
so has part: feature:5634980-5635078:1:exon
so has part: feature:5635292-5635387:1:exon
so has part: feature:5638185-5638260:1:exon
so has part: feature:5639129-5639228:1:exon
so has part: feature:5640683-5640757:1:exon
so has part: feature:5650251-5650393:1:exon
so has part: feature:5661642-5661688:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5569863-5569985:1:exon

position:5569985:1
position: 5569985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5573481-5573556:1:exon

position:5573481:1
position: 5573481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5573556:1
position: 5573556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5591955-5592104:1:exon

position:5591955:1
position: 5591955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5592104:1
position: 5592104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5612438-5612544:1:exon

position:5612438:1
position: 5612438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5612544:1
position: 5612544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5613077-5613210:1:exon

position:5613077:1
position: 5613077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5613210:1
position: 5613210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5615936-5616017:1:exon

position:5615936:1
position: 5615936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5616017:1
position: 5616017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5616711-5616833:1:exon

position:5616711:1
position: 5616711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5616833:1
position: 5616833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5622402-5622520:1:exon

position:5622402:1
position: 5622402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5622520:1
position: 5622520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5626480-5626540:1:exon

position:5626480:1
position: 5626480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5626540:1
position: 5626540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5627202-5627373:1:exon

position:5627202:1
position: 5627202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5627373:1
position: 5627373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5629562-5629714:1:exon

position:5629562:1
position: 5629562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5629714:1
position: 5629714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5630849-5631074:1:exon

position:5630849:1
position: 5630849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5631074:1
position: 5631074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5631994-5632165:1:exon

position:5631994:1
position: 5631994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5632165:1
position: 5632165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5632552-5632638:1:exon

position:5632552:1
position: 5632552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5632638:1
position: 5632638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5633416-5633523:1:exon

position:5633416:1
position: 5633416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5633523:1
position: 5633523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5633734-5633892:1:exon

position:5633734:1
position: 5633734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5633892:1
position: 5633892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5633988-5634075:1:exon

position:5633988:1
position: 5633988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5634075:1
position: 5634075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5634980-5635078:1:exon

position:5634980:1
position: 5634980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5635078:1
position: 5635078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5635292-5635387:1:exon

position:5635292:1
position: 5635292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5635387:1
position: 5635387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5638185-5638260:1:exon

position:5638185:1
position: 5638185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5638260:1
position: 5638260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:5639129-5639228:1:exon

position:5639129:1
position: 5639129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5639228:1
position: 5639228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:5640683-5640757:1:exon

position:5640683:1
position: 5640683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5640757:1
position: 5640757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:5650251-5650393:1:exon

position:5650251:1
position: 5650251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5650393:1
position: 5650393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:5661642-5661688:1:exon

position:5661642:1
position: 5661642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116779991
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779991
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transportin-1-like
translation: MEHEWKPDEQGLLQILQLLKESQSPDTTTQRAVQQKLEQLNQYPDFNNYLIFVLTKLKSEDEPTRSLSGLILKNNVKAHFHNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASKGELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDALDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEPEVRKNVCRALVMLLEVRMDRLLPHMISIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLCRHLTKLIPVLVNGMKYSEIDIILLKGDVEEDEAIPDSEQDIRPRFHRSRTVAQQHEEDRIEDDDDDDDNDLDDDDTLSDWNLRKCSAAALDVLANVFRDELLPHILPLLKELLFHPEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSNKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLHNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVACSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIPVVLHQLVEIINRPNTPKTLLENTAITIGRLGFVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVVQDFIFFCDAVASWINPKDDLRDMFCKILHGFKNQVGDDNWRRFSDQFPLPLKERLAAYYGV
SIO_010081: LOC116779991
subclass of: SO_0000673
so part of: LOC116779991
location: join(5569881..5569985,5573481..5573556,5591955..5592104,5612438..5612544,5613077..5613210,5615936..5616017,5616711..5616833,5622402..5622520,5626480..5626540,5627202..5627373,5629562..5629714,5630849..5631074,5631994..5632165,5632552..5632638,5633416..5633523,5633734..5633892,5633988..5634075,5634980..5635078,5635292..5635387,5638185..5638260,5639129..5639228,5640683..5640757,5650251..5650358)
location: region:5569881-5650358:1
so has part: feature:5569881-5569985:1:exon
so has part: feature:5573481-5573556:1:exon
so has part: feature:5591955-5592104:1:exon
so has part: feature:5612438-5612544:1:exon
so has part: feature:5613077-5613210:1:exon
so has part: feature:5615936-5616017:1:exon
so has part: feature:5616711-5616833:1:exon
so has part: feature:5622402-5622520:1:exon
so has part: feature:5626480-5626540:1:exon
so has part: feature:5627202-5627373:1:exon
so has part: feature:5629562-5629714:1:exon
so has part: feature:5630849-5631074:1:exon
so has part: feature:5631994-5632165:1:exon
so has part: feature:5632552-5632638:1:exon
so has part: feature:5633416-5633523:1:exon
so has part: feature:5633734-5633892:1:exon
so has part: feature:5633988-5634075:1:exon
so has part: feature:5634980-5635078:1:exon
so has part: feature:5635292-5635387:1:exon
so has part: feature:5638185-5638260:1:exon
so has part: feature:5639129-5639228:1:exon
so has part: feature:5640683-5640757:1:exon
so has part: feature:5650251-5650358:1:exon

XP_032530387.1
type: Protein
SIO_000068: ncbiprotein

position:5569881:1
position: 5569881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5650358:1
position: 5650358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5569881-5569985:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5573481-5573556:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5591955-5592104:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5612438-5612544:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5613077-5613210:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5615936-5616017:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5616711-5616833:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5622402-5622520:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5626480-5626540:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5627202-5627373:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5629562-5629714:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5630849-5631074:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5631994-5632165:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5632552-5632638:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5633416-5633523:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5633734-5633892:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5633988-5634075:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5634980-5635078:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5635292-5635387:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5638185-5638260:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5639129-5639228:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5640683-5640757:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5650251-5650358:1:exon

LOC116779979
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779979
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5671204..5885472
location: region:5671204-5885472:1
so has part: feature:5671204-5885472:1:exon
subclass of: SO_0000010

116779979
type: Gene
SIO_000068: ncbigene

position:5671204:1
position: 5671204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5885472:1
position: 5885472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5671204-5885472:1:exon

LOC116779979
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779979
product: F-BAR domain only protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 3% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674481.1
SIO_010081: LOC116779979
subclass of: SO_0000673
so part of: LOC116779979
location: join(5671204..5671236,5681039..5681130,5696734..5696808,5702390..5702531,5702622..5702774,5713906..5714010,5736608..5736706,5738094..5738190,5802621..5802665,5804917..5804989,5834969..5834993,5846759..5846813,5852209..5852387,5852964..5852978,5853380..5853404,5854226..5854268,5854904..5854998,5860212..5860315,5864767..5864896,5867467..5867578,5871161..5871316,5873412..5873544,5875460..5875659,5883384..5883448,5885049..5885213,5885450..5885472)
location: region:5671204-5885472:1
so has part: feature:5671204-5671236:1:exon
so has part: feature:5681039-5681130:1:exon
so has part: feature:5696734-5696808:1:exon
so has part: feature:5702390-5702531:1:exon
so has part: feature:5702622-5702774:1:exon
so has part: feature:5713906-5714010:1:exon
so has part: feature:5736608-5736706:1:exon
so has part: feature:5738094-5738190:1:exon
so has part: feature:5802621-5802665:1:exon
so has part: feature:5804917-5804989:1:exon
so has part: feature:5834969-5834993:1:exon
so has part: feature:5846759-5846813:1:exon
so has part: feature:5852209-5852387:1:exon
so has part: feature:5852964-5852978:1:exon
so has part: feature:5853380-5853404:1:exon
so has part: feature:5854226-5854268:1:exon
so has part: feature:5854904-5854998:1:exon
so has part: feature:5860212-5860315:1:exon
so has part: feature:5864767-5864896:1:exon
so has part: feature:5867467-5867578:1:exon
so has part: feature:5871161-5871316:1:exon
so has part: feature:5873412-5873544:1:exon
so has part: feature:5875460-5875659:1:exon
so has part: feature:5883384-5883448:1:exon
so has part: feature:5885049-5885213:1:exon
so has part: feature:5885450-5885472:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5671204-5671236:1:exon

position:5671236:1
position: 5671236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5681039-5681130:1:exon

position:5681039:1
position: 5681039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5681130:1
position: 5681130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5696734-5696808:1:exon

position:5696734:1
position: 5696734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5696808:1
position: 5696808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5702390-5702531:1:exon

position:5702390:1
position: 5702390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5702531:1
position: 5702531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5702622-5702774:1:exon

position:5702622:1
position: 5702622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5702774:1
position: 5702774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5713906-5714010:1:exon

position:5713906:1
position: 5713906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5714010:1
position: 5714010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5736608-5736706:1:exon

position:5736608:1
position: 5736608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5736706:1
position: 5736706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5738094-5738190:1:exon

position:5738094:1
position: 5738094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5738190:1
position: 5738190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5802621-5802665:1:exon

position:5802621:1
position: 5802621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5802665:1
position: 5802665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5804917-5804989:1:exon

position:5804917:1
position: 5804917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5804989:1
position: 5804989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5834969-5834993:1:exon

position:5834969:1
position: 5834969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5834993:1
position: 5834993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5846759-5846813:1:exon

position:5846759:1
position: 5846759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5846813:1
position: 5846813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5852209-5852387:1:exon

position:5852209:1
position: 5852209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5852387:1
position: 5852387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5852964-5852978:1:exon

position:5852964:1
position: 5852964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5852978:1
position: 5852978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5853380-5853404:1:exon

position:5853380:1
position: 5853380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5853404:1
position: 5853404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5854226-5854268:1:exon

position:5854226:1
position: 5854226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5854268:1
position: 5854268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5854904-5854998:1:exon

position:5854904:1
position: 5854904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5854998:1
position: 5854998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5860212-5860315:1:exon

position:5860212:1
position: 5860212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5860315:1
position: 5860315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5864767-5864896:1:exon

position:5864767:1
position: 5864767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5864896:1
position: 5864896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5867467-5867578:1:exon

position:5867467:1
position: 5867467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5867578:1
position: 5867578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:5871161-5871316:1:exon

position:5871161:1
position: 5871161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5871316:1
position: 5871316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:5873412-5873544:1:exon

position:5873412:1
position: 5873412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5873544:1
position: 5873544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:5875460-5875659:1:exon

position:5875460:1
position: 5875460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5875659:1
position: 5875659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:5883384-5883448:1:exon

position:5883384:1
position: 5883384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5883448:1
position: 5883448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:5885049-5885213:1:exon

position:5885049:1
position: 5885049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5885213:1
position: 5885213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:5885450-5885472:1:exon

position:5885450:1
position: 5885450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116779979
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779979
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-BAR domain only protein 2-like
translation: MAYFAESFWGERNNGFDVLYHNMKHGHLSTKDLAEFIRERAAIEEAYSRSMTKLAKSASNYTQLGTFAPVWDVFKTSTEKLASCHLDLMRRLQELIKEVHKYGDEQIKTYKKTKEDVSGTLEAVQNIQSITQALQKSKENYNAKCVEQERLKKEGATQREVDKAAVKLKKATDTYKLYVEKYAAVKSAFEQKMTETAQKFQDIEETHLLHMKEIIESLSNTIKEIHLQIGEVYEEFIDNMTNTTVKSLIQKFAESKGTGKERPGPIEFEECNTSNAVEGIKPRKRKPFGFSGIMKKEKDIESMMCPDTDSVNIPDIDDEGYSIKPEASQDTKKNHFYSSSDSDSEDDEPRRFHVEIKPVQTNDNSQYTMPSLDELKVSIGNIALSPAISQKQSSAQTNQNASSEELTKSKLSTPANEKGNSDLLAWNPLLSSSLESSSSGLMVSSSSSARPTNRLSVGTIVPAPRPTSSPKLSTGKFSGINEIPRPFNPPLTSNSSPLPAAPLAHAESSSSISSSVSLSTANTPTVGVSRGPNPVRLGNQDTVPVAVALTESVNAYFKGADPTKCIVKITGDMTLSFPSGIIKVFTSNPSPAALCFRVKNTSKLDQILPNAQLVYSDQSQSDSSSKDFWVNMQAITVYLKKLSEHNPSASYYNVDVLKYQVSSNGIQSTPLNLATYWKCSASTTDVRVDYKYNPESMNVPSMLSNVQVVVPVDGGVTNMQSLPPAKWNADQVKVYWKISSISEKSENGGSGSLRAKFELSEGPSKPATLAVQFISEGSTLSGIDVELVSTGYRLSLLKKRFATGWYMADC
SIO_010081: LOC116779979
subclass of: SO_0000673
so part of: LOC116779979
location: join(5671210..5671236,5681039..5681130,5696734..5696808,5702390..5702531,5702622..5702774,5713906..5714010,5736608..5736706,5738094..5738190,5802621..5802665,5804917..5804989,5834969..5834993,5846759..5846813,5852209..5852387,5852964..5852978,5853380..5853404,5854226..5854268,5854904..5854998,5860212..5860315,5864767..5864896,5867467..5867578,5871161..5871316,5873412..5873544,5875460..5875659,5883384..5883448,5885049..5885213,5885450..5885472)
location: region:5671210-5885472:1
so has part: feature:5671210-5671236:1:exon
so has part: feature:5681039-5681130:1:exon
so has part: feature:5696734-5696808:1:exon
so has part: feature:5702390-5702531:1:exon
so has part: feature:5702622-5702774:1:exon
so has part: feature:5713906-5714010:1:exon
so has part: feature:5736608-5736706:1:exon
so has part: feature:5738094-5738190:1:exon
so has part: feature:5802621-5802665:1:exon
so has part: feature:5804917-5804989:1:exon
so has part: feature:5834969-5834993:1:exon
so has part: feature:5846759-5846813:1:exon
so has part: feature:5852209-5852387:1:exon
so has part: feature:5852964-5852978:1:exon
so has part: feature:5853380-5853404:1:exon
so has part: feature:5854226-5854268:1:exon
so has part: feature:5854904-5854998:1:exon
so has part: feature:5860212-5860315:1:exon
so has part: feature:5864767-5864896:1:exon
so has part: feature:5867467-5867578:1:exon
so has part: feature:5871161-5871316:1:exon
so has part: feature:5873412-5873544:1:exon
so has part: feature:5875460-5875659:1:exon
so has part: feature:5883384-5883448:1:exon
so has part: feature:5885049-5885213:1:exon
so has part: feature:5885450-5885472:1:exon

XP_032530372.1
type: Protein
SIO_000068: ncbiprotein

position:5671210:1
position: 5671210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5671210-5671236:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5681039-5681130:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5696734-5696808:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5702390-5702531:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5702622-5702774:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5713906-5714010:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5736608-5736706:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5738094-5738190:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5802621-5802665:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5804917-5804989:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5834969-5834993:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5846759-5846813:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5852209-5852387:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5852964-5852978:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5853380-5853404:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5854226-5854268:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5854904-5854998:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5860212-5860315:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5864767-5864896:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5867467-5867578:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5871161-5871316:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5873412-5873544:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5875460-5875659:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5883384-5883448:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5885049-5885213:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5885450-5885472:1:exon

LOC116779980
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779980
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6113166..6116995)
location: region:6113166-6116995:-1
so has part: feature:6113166-6116995:-1:exon
subclass of: SO_0000010

116779980
type: Gene
SIO_000068: ncbigene

position:6113166:-1
position: 6113166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6116995:-1
position: 6116995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6113166-6116995:-1:exon

LOC116779980
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779980
product: uncharacterized LOC116779980
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 45% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674482.1
SIO_010081: LOC116779980
subclass of: SO_0000673
so part of: LOC116779980
location: complement(join(6113166..6113306,6114375..6114902,6116885..6116995))
location: region:6113166-6116995:-1
so has part: feature:6116885-6116995:-1:exon
so has part: feature:6114375-6114902:-1:exon
so has part: feature:6113166-6113306:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6116885-6116995:-1:exon

position:6116885:-1
position: 6116885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6114375-6114902:-1:exon

position:6114375:-1
position: 6114375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6114902:-1
position: 6114902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6113166-6113306:-1:exon

position:6113306:-1
position: 6113306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116779980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779980
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116779980
translation: MGPVAIEDGVVVIEEGEEWVEDLTNNRDSEINVGEDVEEGVLEHDCVETIEQVYASRKDLKDEPLTDPDWELYTDGSSFVENGTRYAGYAVVTLQQVIEANALPPGTSAQKAEIWALVRALILSQGRRVNIWTDSKYAFGVVHVHGALWKERGLLTSQGTSIKHREEILQLLEAIHKPSAVAIMHVRGHQTDPGREFQGNRQADQAAKQAAREVIMTTYTAVKVEGIDNWIHYTRIKKVPVSWSVEPLSPTRMVFRANH
SIO_010081: LOC116779980
subclass of: SO_0000673
so part of: LOC116779980
location: complement(join(6113166..6113306,6114375..6114902,6116885..6116995))
location: region:6113166-6116995:-1
so has part: feature:6116885-6116995:-1:exon
so has part: feature:6114375-6114902:-1:exon
so has part: feature:6113166-6113306:-1:exon

XP_032530373.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6116885-6116995:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6114375-6114902:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6113166-6113306:-1:exon

LOC116780000
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780000
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6121988..6122333
location: region:6121988-6122333:1
so has part: feature:6121988-6122333:1:exon
subclass of: SO_0000011

116780000
type: Gene
SIO_000068: ncbigene

position:6121988:1
position: 6121988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6122333:1
position: 6122333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6121988-6122333:1:exon

LOC116780000
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780000
product: uncharacterized LOC116780000
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_004354273.1
SIO_010081: LOC116780000
subclass of: SO_0000673
so part of: LOC116780000
location: join(6121988..6122042,6122257..6122333)
location: region:6121988-6122333:1
so has part: feature:6121988-6122042:1:exon
so has part: feature:6122257-6122333:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6121988-6122042:1:exon

position:6122042:1
position: 6122042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6122257-6122333:1:exon

position:6122257:1
position: 6122257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116779998
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779998
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6205470..6237504)
location: region:6205470-6237504:-1
so has part: feature:6205470-6237504:-1:exon
subclass of: SO_0000010

116779998
type: Gene
SIO_000068: ncbigene

position:6205470:-1
position: 6205470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6237504:-1
position: 6237504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6205470-6237504:-1:exon

LOC116779998
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779998
product: transcription factor BTF3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 21 Proteins, and 26% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674517.1
SIO_010081: LOC116779998
subclass of: SO_0000673
so part of: LOC116779998
location: complement(join(6205470..6205734,6207122..6207181,6229704..6229905,6230125..6230238,6237436..6237504))
location: region:6205470-6237504:-1
so has part: feature:6237436-6237504:-1:exon
so has part: feature:6230125-6230238:-1:exon
so has part: feature:6229704-6229905:-1:exon
so has part: feature:6207122-6207181:-1:exon
so has part: feature:6205470-6205734:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6237436-6237504:-1:exon

position:6237436:-1
position: 6237436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6230125-6230238:-1:exon

position:6230125:-1
position: 6230125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6230238:-1
position: 6230238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6229704-6229905:-1:exon

position:6229704:-1
position: 6229704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6229905:-1
position: 6229905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6207122-6207181:-1:exon

position:6207122:-1
position: 6207122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6207181:-1
position: 6207181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6205470-6205734:-1:exon

position:6205734:-1
position: 6205734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116779998
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779998
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor BTF3-like
translation: MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGAVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPNILNQLGADSLTSLRRLAEALPKQSVDGKAPLATGGGDDDDEVPDLVENFDEVSKNEAN
SIO_010081: LOC116779998
subclass of: SO_0000673
so part of: LOC116779998
location: complement(join(6205688..6205734,6207122..6207181,6229704..6229905,6230125..6230238,6237436..6237504))
location: region:6205688-6237504:-1
so has part: feature:6237436-6237504:-1:exon
so has part: feature:6230125-6230238:-1:exon
so has part: feature:6229704-6229905:-1:exon
so has part: feature:6207122-6207181:-1:exon
so has part: feature:6205688-6205734:-1:exon

XP_032530408.1
type: Protein
SIO_000068: ncbiprotein

position:6205688:-1
position: 6205688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6237436-6237504:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6230125-6230238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6229704-6229905:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6207122-6207181:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6205688-6205734:-1:exon

LOC116780004
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780004
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6281697..6297485
location: region:6281697-6297485:1
so has part: feature:6281697-6297485:1:exon
subclass of: SO_0000011

116780004
type: Gene
SIO_000068: ncbigene

position:6281697:1
position: 6281697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6297485:1
position: 6297485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6281697-6297485:1:exon

LOC116780004
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780004
product: uncharacterized LOC116780004
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004354277.1
SIO_010081: LOC116780004
subclass of: SO_0000673
so part of: LOC116780004
location: join(6281697..6281707,6286253..6286257,6297324..6297485)
location: region:6281697-6297485:1
so has part: feature:6281697-6281707:1:exon
so has part: feature:6286253-6286257:1:exon
so has part: feature:6297324-6297485:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6281697-6281707:1:exon

position:6281707:1
position: 6281707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6286253-6286257:1:exon

position:6286253:1
position: 6286253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6286257:1
position: 6286257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6297324-6297485:1:exon

position:6297324:1
position: 6297324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116779997
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779997
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6418854..6435519
location: region:6418854-6435519:1
so has part: feature:6418854-6435519:1:exon
subclass of: SO_0000010

116779997
type: Gene
SIO_000068: ncbigene

position:6418854:1
position: 6418854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6435519:1
position: 6435519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6418854-6435519:1:exon

LOC116779997
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779997
product: AN1-type zinc finger protein 5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674516.1
SIO_010081: LOC116779997
subclass of: SO_0000673
so part of: LOC116779997
location: join(6418854..6419004,6419409..6419520,6420339..6420436,6434926..6435051,6435353..6435519)
location: region:6418854-6435519:1
so has part: feature:6418854-6419004:1:exon
so has part: feature:6419409-6419520:1:exon
so has part: feature:6420339-6420436:1:exon
so has part: feature:6434926-6435051:1:exon
so has part: feature:6435353-6435519:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6418854-6419004:1:exon

position:6419004:1
position: 6419004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6419409-6419520:1:exon

position:6419409:1
position: 6419409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6419520:1
position: 6419520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6420339-6420436:1:exon

position:6420339:1
position: 6420339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6420436:1
position: 6420436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6434926-6435051:1:exon

position:6434926:1
position: 6434926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6435051:1
position: 6435051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6435353-6435519:1:exon

position:6435353:1
position: 6435353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116779997
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779997
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AN1-type zinc finger protein 5-like
translation: MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSDRISPMGAASGSNSPTSDSASVQRADGSLSQCEGTASSTSGKSRNVLVAALPVMQQMTEMSISREEKVSPKTEIEPVVTQPSPSVSQPSTSQSEEKASELPKPKRNRCFTCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKTEAAAKIRKENPVVVAEKIQRI
SIO_010081: LOC116779997
subclass of: SO_0000673
so part of: LOC116779997
location: join(6418854..6419004,6419409..6419520,6420339..6420436,6434926..6435051,6435353..6435501)
location: region:6418854-6435501:1
so has part: feature:6418854-6419004:1:exon
so has part: feature:6419409-6419520:1:exon
so has part: feature:6420339-6420436:1:exon
so has part: feature:6434926-6435051:1:exon
so has part: feature:6435353-6435501:1:exon

XP_032530407.1
type: Protein
SIO_000068: ncbiprotein

position:6435501:1
position: 6435501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6418854-6419004:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6419409-6419520:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6420339-6420436:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6434926-6435051:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6435353-6435501:1:exon

LOC116780077
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780077
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6738348..6766058)
location: region:6738348-6766058:-1
so has part: feature:6738348-6766058:-1:exon
subclass of: SO_0000011

116780077
type: Gene
SIO_000068: ncbigene

position:6738348:-1
position: 6738348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6766058:-1
position: 6766058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6738348-6766058:-1:exon

LOC116780077
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780077
product: uncharacterized LOC116780077
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004354319.1
SIO_010081: LOC116780077
subclass of: SO_0000673
so part of: LOC116780077
location: complement(join(6738348..6738360,6743399..6743403,6765971..6766058))
location: region:6738348-6766058:-1
so has part: feature:6765971-6766058:-1:exon
so has part: feature:6743399-6743403:-1:exon
so has part: feature:6738348-6738360:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6765971-6766058:-1:exon

position:6765971:-1
position: 6765971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6743399-6743403:-1:exon

position:6743399:-1
position: 6743399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6743403:-1
position: 6743403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6738348-6738360:-1:exon

position:6738360:-1
position: 6738360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116780025
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780025
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6877941..6886469
location: region:6877941-6886469:1
so has part: feature:6877941-6886469:1:exon
subclass of: SO_0000011

116780025
type: Gene
SIO_000068: ncbigene

position:6877941:1
position: 6877941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6886469:1
position: 6886469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6877941-6886469:1:exon

LOC116780025
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780025
product: uncharacterized LOC116780025
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004354290.1
SIO_010081: LOC116780025
subclass of: SO_0000673
so part of: LOC116780025
location: join(6877941..6878024,6886258..6886262,6886459..6886469)
location: region:6877941-6886469:1
so has part: feature:6877941-6878024:1:exon
so has part: feature:6886258-6886262:1:exon
so has part: feature:6886459-6886469:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6877941-6878024:1:exon

position:6878024:1
position: 6878024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6886258-6886262:1:exon

position:6886258:1
position: 6886258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6886262:1
position: 6886262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6886459-6886469:1:exon

position:6886459:1
position: 6886459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116779982
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779982
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6940366..7012075
location: region:6940366-7012075:1
so has part: feature:6940366-7012075:1:exon
subclass of: SO_0000010

116779982
type: Gene
SIO_000068: ncbigene

position:6940366:1
position: 6940366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7012075:1
position: 7012075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6940366-7012075:1:exon

LOC116779982
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779982
product: chromodomain-helicase-DNA-binding protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 24 Proteins, and 6% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674483.1
SIO_010081: LOC116779982
subclass of: SO_0000673
so part of: LOC116779982
location: join(6940366..6940425,6960103..6960320,6967495..6967678,6969885..6969986,6970643..6970710,6972940..6973089,6973215..6973468,6977659..6977884,6978781..6978881,6979137..6979315,6979862..6979989,6980074..6980290,6980927..6981016,6981876..6982066,6983278..6983466,6983638..6983800,6985461..6985613,6985771..6985842,6990168..6990317,6990991..6991139,6991412..6991508,6991590..6991685,6993771..6993947,6994156..6994316,6995831..6995872,6996288..6996418,6996855..6996993,6997683..6997833,7000279..7000401,7000754..7000885,7002273..7002530,7002968..7003108,7006459..7006637,7010024..7010120,7010326..7010380,7011348..7011555,7011730..7012075)
location: region:6940366-7012075:1
so has part: feature:6940366-6940425:1:exon
so has part: feature:6960103-6960320:1:exon
so has part: feature:6967495-6967678:1:exon
so has part: feature:6969885-6969986:1:exon
so has part: feature:6970643-6970710:1:exon
so has part: feature:6972940-6973089:1:exon
so has part: feature:6973215-6973468:1:exon
so has part: feature:6977659-6977884:1:exon
so has part: feature:6978781-6978881:1:exon
so has part: feature:6979137-6979315:1:exon
so has part: feature:6979862-6979989:1:exon
so has part: feature:6980074-6980290:1:exon
so has part: feature:6980927-6981016:1:exon
so has part: feature:6981876-6982066:1:exon
so has part: feature:6983278-6983466:1:exon
so has part: feature:6983638-6983800:1:exon
so has part: feature:6985461-6985613:1:exon
so has part: feature:6985771-6985842:1:exon
so has part: feature:6990168-6990317:1:exon
so has part: feature:6990991-6991139:1:exon
so has part: feature:6991412-6991508:1:exon
so has part: feature:6991590-6991685:1:exon
so has part: feature:6993771-6993947:1:exon
so has part: feature:6994156-6994316:1:exon
so has part: feature:6995831-6995872:1:exon
so has part: feature:6996288-6996418:1:exon
so has part: feature:6996855-6996993:1:exon
so has part: feature:6997683-6997833:1:exon
so has part: feature:7000279-7000401:1:exon
so has part: feature:7000754-7000885:1:exon
so has part: feature:7002273-7002530:1:exon
so has part: feature:7002968-7003108:1:exon
so has part: feature:7006459-7006637:1:exon
so has part: feature:7010024-7010120:1:exon
so has part: feature:7010326-7010380:1:exon
so has part: feature:7011348-7011555:1:exon
so has part: feature:7011730-7012075:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6940366-6940425:1:exon

position:6940425:1
position: 6940425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6960103-6960320:1:exon

position:6960103:1
position: 6960103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6960320:1
position: 6960320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6967495-6967678:1:exon

position:6967495:1
position: 6967495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6967678:1
position: 6967678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6969885-6969986:1:exon

position:6969885:1
position: 6969885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6969986:1
position: 6969986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6970643-6970710:1:exon

position:6970643:1
position: 6970643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6970710:1
position: 6970710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6972940-6973089:1:exon

position:6972940:1
position: 6972940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6973089:1
position: 6973089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6973215-6973468:1:exon

position:6973215:1
position: 6973215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6973468:1
position: 6973468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6977659-6977884:1:exon

position:6977659:1
position: 6977659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6977884:1
position: 6977884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6978781-6978881:1:exon

position:6978781:1
position: 6978781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6978881:1
position: 6978881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6979137-6979315:1:exon

position:6979137:1
position: 6979137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6979315:1
position: 6979315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6979862-6979989:1:exon

position:6979862:1
position: 6979862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6979989:1
position: 6979989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6980074-6980290:1:exon

position:6980074:1
position: 6980074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6980290:1
position: 6980290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6980927-6981016:1:exon

position:6980927:1
position: 6980927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6981016:1
position: 6981016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6981876-6982066:1:exon

position:6981876:1
position: 6981876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6982066:1
position: 6982066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6983278-6983466:1:exon

position:6983278:1
position: 6983278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6983466:1
position: 6983466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6983638-6983800:1:exon

position:6983638:1
position: 6983638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6983800:1
position: 6983800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6985461-6985613:1:exon

position:6985461:1
position: 6985461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6985613:1
position: 6985613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6985771-6985842:1:exon

position:6985771:1
position: 6985771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6985842:1
position: 6985842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6990168-6990317:1:exon

position:6990168:1
position: 6990168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6990317:1
position: 6990317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:6990991-6991139:1:exon

position:6990991:1
position: 6990991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6991139:1
position: 6991139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:6991412-6991508:1:exon

position:6991412:1
position: 6991412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6991508:1
position: 6991508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:6991590-6991685:1:exon

position:6991590:1
position: 6991590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6991685:1
position: 6991685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:6993771-6993947:1:exon

position:6993771:1
position: 6993771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6993947:1
position: 6993947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:6994156-6994316:1:exon

position:6994156:1
position: 6994156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6994316:1
position: 6994316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:6995831-6995872:1:exon

position:6995831:1
position: 6995831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6995872:1
position: 6995872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:6996288-6996418:1:exon

position:6996288:1
position: 6996288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6996418:1
position: 6996418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:6996855-6996993:1:exon

position:6996855:1
position: 6996855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6996993:1
position: 6996993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:6997683-6997833:1:exon

position:6997683:1
position: 6997683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6997833:1
position: 6997833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:7000279-7000401:1:exon

position:7000279:1
position: 7000279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7000401:1
position: 7000401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:7000754-7000885:1:exon

position:7000754:1
position: 7000754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7000885:1
position: 7000885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:7002273-7002530:1:exon

position:7002273:1
position: 7002273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7002530:1
position: 7002530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:7002968-7003108:1:exon

position:7002968:1
position: 7002968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7003108:1
position: 7003108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:7006459-7006637:1:exon

position:7006459:1
position: 7006459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7006637:1
position: 7006637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:7010024-7010120:1:exon

position:7010024:1
position: 7010024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7010120:1
position: 7010120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:7010326-7010380:1:exon

position:7010326:1
position: 7010326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7010380:1
position: 7010380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:7011348-7011555:1:exon

position:7011348:1
position: 7011348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7011555:1
position: 7011555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:7011730-7012075:1:exon

position:7011730:1
position: 7011730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116779982
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779982
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 1-like
translation: MRVAPPPEGRFRGREVNSREVQEFTFVFIELQGDETRLFRDEPKGGKPELGMKSAAQLKCMYTNVCNMDNKQEELEAIMQQESYDVIAITETYQSDNDSGSASASGSGSSSGSSSDGSSSQSGSSDSESSSESDTSREKKQVQAKPPPKVDGSEFWKSSPSILAVQRSTVLKKQQQQKAPSSDSGSEEDSSNSEDSADDSSSEAKKKKHRDEDWQMSGSGSVSGTSSDSESDEDREKSSCEDSESDYEPKNKVKSRKPPNRIEPKSSKKIAGQKKRQLDSSDDDDYDKRVSRRQATVNVSYKEAEETKTDSDDLLEVCGEDVPQTEEDEFETIEKFMNSRIGRKGATGAATTIYAVEADGDPNTGFEKSKELGEMQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKRWLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALIAKKFQACIDEYFSRNQSKTTPFKDFKILKQRPRFVALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLGDITSRNTIRTHEWMHPQTKRLKFNILLTTYEILLKDKSFLGGLNWIFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEVFEEEHGKGREFGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNRQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPFNKEELSAILKFGAEELFKEPEGEEEEPQEMDIDEILKRAETRENEPGPLTVGDELLSQFKVANFSNMDEDDIELEPEQNLRNWEEIIPEVQRRQIEEEERQKELEKIYMLPRMRNCAKQISFNGSEGKRSRRRRYSGSDSDSVSERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDAIARDAELVDKSEMDLRRLGELVHNGCIKSLKDNSFGQERAGGRFGKVKGPTFRISGVQVNAKLVISHEEELAPLHKSIPADPEERKRYVIPCHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLTQKILPDDPDKKPQAKQLQTRADYLIKLLNKDLARKEVQRLTGAGNSKRKKTRSRNRTTKAAKIKEEIKSDSSSPPSENSDEDDEYNEDKIVSVKRPHKKIKAKEENEEKPESDIGIKKEAEEKRETREKENKRNLKREKKEKEDKKEFKNIKEKRENKVKESIQKEKEVKEEKVNEIKSENKEKNKKVSLLDIPVHITATSEPVPISDESEELDQKTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQHSDQNISNNVNTHVIRNPDVERLKENTNHDDSSRDSSSDRYLSQYHDHHKDRYQGDAYKKSDSRKRSYSGFSNGKDHRDWDHYKQDSRYYSDSKHRKLDDHRSRDHRSNLEGSLKDSRPHSDHRSHSDHRIHSDHRFTSEYSHHKSSRDYRYHSDWQMDHRASGSGPRSPLDQRSPYGSRSPFEHSSDHKSTPEHTWNSWKT
SIO_010081: LOC116779982
subclass of: SO_0000673
so part of: LOC116779982
location: join(6940366..6940425,6960103..6960320,6967495..6967678,6969885..6969986,6970643..6970710,6972940..6973089,6973215..6973468,6977659..6977884,6978781..6978881,6979137..6979315,6979862..6979989,6980074..6980290,6980927..6981016,6981876..6982066,6983278..6983466,6983638..6983800,6985461..6985613,6985771..6985842,6990168..6990317,6990991..6991139,6991412..6991508,6991590..6991685,6993771..6993947,6994156..6994316,6995831..6995872,6996288..6996418,6996855..6996993,6997683..6997833,7000279..7000401,7000754..7000885,7002273..7002530,7002968..7003108,7006459..7006637,7010024..7010120,7010326..7010380,7011348..7011555,7011730..7012075)
location: region:6940366-7012075:1
so has part: feature:6940366-6940425:1:exon
so has part: feature:6960103-6960320:1:exon
so has part: feature:6967495-6967678:1:exon
so has part: feature:6969885-6969986:1:exon
so has part: feature:6970643-6970710:1:exon
so has part: feature:6972940-6973089:1:exon
so has part: feature:6973215-6973468:1:exon
so has part: feature:6977659-6977884:1:exon
so has part: feature:6978781-6978881:1:exon
so has part: feature:6979137-6979315:1:exon
so has part: feature:6979862-6979989:1:exon
so has part: feature:6980074-6980290:1:exon
so has part: feature:6980927-6981016:1:exon
so has part: feature:6981876-6982066:1:exon
so has part: feature:6983278-6983466:1:exon
so has part: feature:6983638-6983800:1:exon
so has part: feature:6985461-6985613:1:exon
so has part: feature:6985771-6985842:1:exon
so has part: feature:6990168-6990317:1:exon
so has part: feature:6990991-6991139:1:exon
so has part: feature:6991412-6991508:1:exon
so has part: feature:6991590-6991685:1:exon
so has part: feature:6993771-6993947:1:exon
so has part: feature:6994156-6994316:1:exon
so has part: feature:6995831-6995872:1:exon
so has part: feature:6996288-6996418:1:exon
so has part: feature:6996855-6996993:1:exon
so has part: feature:6997683-6997833:1:exon
so has part: feature:7000279-7000401:1:exon
so has part: feature:7000754-7000885:1:exon
so has part: feature:7002273-7002530:1:exon
so has part: feature:7002968-7003108:1:exon
so has part: feature:7006459-7006637:1:exon
so has part: feature:7010024-7010120:1:exon
so has part: feature:7010326-7010380:1:exon
so has part: feature:7011348-7011555:1:exon
so has part: feature:7011730-7012075:1:exon

XP_032530374.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6940366-6940425:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6960103-6960320:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6967495-6967678:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6969885-6969986:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6970643-6970710:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6972940-6973089:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6973215-6973468:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6977659-6977884:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6978781-6978881:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6979137-6979315:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6979862-6979989:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6980074-6980290:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6980927-6981016:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6981876-6982066:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6983278-6983466:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6983638-6983800:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6985461-6985613:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6985771-6985842:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6990168-6990317:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6990991-6991139:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6991412-6991508:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6991590-6991685:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6993771-6993947:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6994156-6994316:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:6995831-6995872:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:6996288-6996418:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:6996855-6996993:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:6997683-6997833:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7000279-7000401:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7000754-7000885:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7002273-7002530:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:7002968-7003108:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:7006459-7006637:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:7010024-7010120:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:7010326-7010380:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:7011348-7011555:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:7011730-7012075:1:exon

LOC116780038
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780038
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7073276..7150557
location: region:7073276-7150557:1
so has part: feature:7073276-7150557:1:exon
subclass of: SO_0000010

116780038
type: Gene
SIO_000068: ncbigene

position:7073276:1
position: 7073276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7150557:1
position: 7150557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7073276-7150557:1:exon

LOC116780038
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116780038
product: secretory carrier-associated membrane protein 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674546.1
SIO_010081: LOC116780038
subclass of: SO_0000673
so part of: LOC116780038
location: join(7073276..7073332,7078003..7078080,7113574..7113672,7113938..7114049,7123569..7123697,7137536..7137695,7141170..7141271,7143741..7143858,7150399..7150557)
location: region:7073276-7150557:1
so has part: feature:7073276-7073332:1:exon
so has part: feature:7078003-7078080:1:exon
so has part: feature:7113574-7113672:1:exon
so has part: feature:7113938-7114049:1:exon
so has part: feature:7123569-7123697:1:exon
so has part: feature:7137536-7137695:1:exon
so has part: feature:7141170-7141271:1:exon
so has part: feature:7143741-7143858:1:exon
so has part: feature:7150399-7150557:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7073276-7073332:1:exon

position:7073332:1
position: 7073332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7078003-7078080:1:exon

position:7078003:1
position: 7078003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7078080:1
position: 7078080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7113574-7113672:1:exon

position:7113574:1
position: 7113574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7113672:1
position: 7113672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7113938-7114049:1:exon

position:7113938:1
position: 7113938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7114049:1
position: 7114049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7123569-7123697:1:exon

position:7123569:1
position: 7123569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7123697:1
position: 7123697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7137536-7137695:1:exon

position:7137536:1
position: 7137536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7137695:1
position: 7137695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7141170-7141271:1:exon

position:7141170:1
position: 7141170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7141271:1
position: 7141271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7143741-7143858:1:exon

position:7143741:1
position: 7143741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7143858:1
position: 7143858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7150399-7150557:1:exon

position:7150399:1
position: 7150399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116780038
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116780038
product: secretory carrier-associated membrane protein 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674547.1
SIO_010081: LOC116780038
subclass of: SO_0000673
so part of: LOC116780038
location: join(7073276..7073332,7113574..7113672,7113938..7114049,7123569..7123697,7137536..7137695,7141170..7141271,7143741..7143858,7150399..7150557)
location: region:7073276-7150557:1
so has part: feature:7073276-7073332:1:exon
so has part: feature:7113574-7113672:1:exon
so has part: feature:7113938-7114049:1:exon
so has part: feature:7123569-7123697:1:exon
so has part: feature:7137536-7137695:1:exon
so has part: feature:7141170-7141271:1:exon
so has part: feature:7143741-7143858:1:exon
so has part: feature:7150399-7150557:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7073276-7073332:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7113574-7113672:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7113938-7114049:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7123569-7123697:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7137536-7137695:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7141170-7141271:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7143741-7143858:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7150399-7150557:1:exon

LOC116780038
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116780038
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: secretory carrier-associated membrane protein 1-like isoform X1
translation: MSDFDSNPFADPDLNNPFKDPSVAQVTRNVPPGLDEYNPFSDSRTPPLGNVKMPNVPSTQPAIMKPTEEPPTYTQISKERALAQAELLKRQEELERKATELDRKEREMQSVNQQGGRKNNWPPLPQNFPVGPCFYQDFSVDIPVEFQKTVKIMYYLWMFHTVTLFLNIFGCLAWFYIDATRGVDFGLSILWFLLFTPCSFVCWYRPLYGAFRSDSSFRFFVFFFVYICQFAVHILQAAGFQRWGNCGWISSLTGLNKSIPVGIMMIIIASLFTASAVISLVMFKKVHGLYRTTGASFEKAQQEFATGVMSNKTVQTAAANAASTAATSGAQNVFKGN
SIO_010081: LOC116780038
subclass of: SO_0000673
so part of: LOC116780038
location: join(7073276..7073332,7078003..7078080,7113574..7113672,7113938..7114049,7123569..7123697,7137536..7137695,7141170..7141271,7143741..7143858,7150399..7150557)
location: region:7073276-7150557:1
so has part: feature:7073276-7073332:1:exon
so has part: feature:7078003-7078080:1:exon
so has part: feature:7113574-7113672:1:exon
so has part: feature:7113938-7114049:1:exon
so has part: feature:7123569-7123697:1:exon
so has part: feature:7137536-7137695:1:exon
so has part: feature:7141170-7141271:1:exon
so has part: feature:7143741-7143858:1:exon
so has part: feature:7150399-7150557:1:exon

XP_032530437.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7073276-7073332:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7078003-7078080:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7113574-7113672:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7113938-7114049:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7123569-7123697:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7137536-7137695:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7141170-7141271:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7143741-7143858:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7150399-7150557:1:exon

LOC116780038
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116780038
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: secretory carrier-associated membrane protein 1-like isoform X2
translation: MSDFDSNPFADPDLNNPFKPPLGNVKMPNVPSTQPAIMKPTEEPPTYTQISKERALAQAELLKRQEELERKATELDRKEREMQSVNQQGGRKNNWPPLPQNFPVGPCFYQDFSVDIPVEFQKTVKIMYYLWMFHTVTLFLNIFGCLAWFYIDATRGVDFGLSILWFLLFTPCSFVCWYRPLYGAFRSDSSFRFFVFFFVYICQFAVHILQAAGFQRWGNCGWISSLTGLNKSIPVGIMMIIIASLFTASAVISLVMFKKVHGLYRTTGASFEKAQQEFATGVMSNKTVQTAAANAASTAATSGAQNVFKGN
SIO_010081: LOC116780038
subclass of: SO_0000673
so part of: LOC116780038
location: join(7073276..7073332,7113574..7113672,7113938..7114049,7123569..7123697,7137536..7137695,7141170..7141271,7143741..7143858,7150399..7150557)
location: region:7073276-7150557:1
so has part: feature:7073276-7073332:1:exon
so has part: feature:7113574-7113672:1:exon
so has part: feature:7113938-7114049:1:exon
so has part: feature:7123569-7123697:1:exon
so has part: feature:7137536-7137695:1:exon
so has part: feature:7141170-7141271:1:exon
so has part: feature:7143741-7143858:1:exon
so has part: feature:7150399-7150557:1:exon

XP_032530438.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7073276-7073332:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7113574-7113672:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7113938-7114049:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7123569-7123697:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7137536-7137695:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7141170-7141271:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7143741-7143858:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7150399-7150557:1:exon

LOC116780067
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780067
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7114112..7119358
location: region:7114112-7119358:1
so has part: feature:7114112-7119358:1:exon
subclass of: SO_0000011

116780067
type: Gene
SIO_000068: ncbigene

position:7114112:1
position: 7114112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7119358:1
position: 7119358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7114112-7119358:1:exon

LOC116780067
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780067
product: uncharacterized LOC116780067
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004354310.1
SIO_010081: LOC116780067
subclass of: SO_0000673
so part of: LOC116780067
location: join(7114112..7114122,7115407..7115410,7119291..7119358)
location: region:7114112-7119358:1
so has part: feature:7114112-7114122:1:exon
so has part: feature:7115407-7115410:1:exon
so has part: feature:7119291-7119358:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7114112-7114122:1:exon

position:7114122:1
position: 7114122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7115407-7115410:1:exon

position:7115407:1
position: 7115407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7115410:1
position: 7115410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7119291-7119358:1:exon

position:7119291:1
position: 7119291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116779983
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779983
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7204545..7209119
location: region:7204545-7209119:1
so has part: feature:7204545-7209119:1:exon
subclass of: SO_0000010

116779983
type: Gene
SIO_000068: ncbigene

position:7204545:1
position: 7204545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7209119:1
position: 7209119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7204545-7209119:1:exon

LOC116779983
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779983
product: uncharacterized LOC116779983
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 34% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674486.1
SIO_010081: LOC116779983
subclass of: SO_0000673
so part of: LOC116779983
location: join(7204545..7205322,7205731..7207910,7208748..7209119)
location: region:7204545-7209119:1
so has part: feature:7204545-7205322:1:exon
so has part: feature:7205731-7207910:1:exon
so has part: feature:7208748-7209119:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7204545-7205322:1:exon

position:7205322:1
position: 7205322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7205731-7207910:1:exon

position:7205731:1
position: 7205731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7207910:1
position: 7207910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7208748-7209119:1:exon

position:7208748:1
position: 7208748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116779983
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779983
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:7207134..7207136,aa:OTHER)
product: LOW QUALITY PROTEIN: uncharacterized protein LOC116779983
translation: MAPLREAVGADRRKVMVKVPFSPNDLLIWKQSAGTYRENPERVARIIKMVIKTQNPDWNDLQVLLDTILDSTEKEMVFRVMVEKAKERIRTLPRAARGTVNDFVPREDPEWDPNVSGDYKKLRIYQELLVEGVRCGIPKTLNWSKLYSVRQDKGESPSAFLERLKETARKYTNLDVEDESGKLQLALIFMGQSQEDIRKKLQKLEGGETRDLEKLLEVAWKVYNNREKESTKRQQASLLALLQAPGGNNGASSHRGRGRGVSGQIEEKTFLRPLDIKFRGKELDHQFLYMPNSPECLLGRDLLSALQAKIIFEKGRVKIEIPEENLAKIFVVKEVEKEEIPQEIEQAVVPWVWETGVPGKSKAATPVRIELKEGAQPVRVRQYPISLEARKGIAPMISQFLVLGILKECESEFNTPIFPVRKPNGKYRLVQDLRAVNLITKDIHPVVANPYTLLTSVSERFQWFTVIDLKDAFFCIPLAPESWKIFAFEWENPETGRKRQLTWTRLPQGFKCSPTIFGNQLAKELEEWKTTQVKESPFSYIILQYVDDIFLGAAEQGLCRQLTIKLLNMLGQAGYRVSKEKAQLVKQKVIYLGCEISQGVRRLGANRIQAICAIPVPRNNQELRSFLGMVGWCRLWIPNFGLTARPLYEAVKEPKLTWGTKQEKAFQELKRALQEAPALGLPDLTKEFQLYVCERQRTALGVLTQRLGSWKRPVGYFSKQLDAVSGGXPGCLRAVAATVILIQEARKLTLGKHMVVYVPHMVIAVLEQKGGHWLSSSRMLQYQALLREQDDVELKITNHLNPAEFLRSTKEEGVLEHDCVETIEQVYASRKDLKDEPLTDPDWELYTDGSSFVENGTRYAGYAVVTLQEVIEANALPPGTSAQKAEIWALVRALILSQGRRVNIWTDSKYAFGVVHVHGALWKERGLLTSQGTSIKHREEILQLLEAIHKPSAVAIMHVRGHQTDPGREFQGNRQADQAAKQAAREPYHAATYQGDPHVVGDQAVFNYVLSLNKTLTTLRGALQWNRPLPLENPVHDISPGDQVYVKNWSVEPLKETWDGPRQVIMTTYTAVKVEGIDNWIHYTRIKKVPVSWSVEPLSPTRMVFRANH
SIO_010081: LOC116779983
subclass of: SO_0000673
so part of: LOC116779983
location: join(7204545..7205322,7205731..7207910,7208748..7209119)
location: region:7204545-7209119:1
so has part: feature:7204545-7205322:1:exon
so has part: feature:7205731-7207910:1:exon
so has part: feature:7208748-7209119:1:exon

XP_032530377.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7204545-7205322:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7205731-7207910:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7208748-7209119:1:exon

LOC116780056
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780056
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7270475..7281102)
location: region:7270475-7281102:-1
so has part: feature:7270475-7281102:-1:exon
subclass of: SO_0000011

116780056
type: Gene
SIO_000068: ncbigene

position:7270475:-1
position: 7270475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7281102:-1
position: 7281102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7270475-7281102:-1:exon

LOC116780056
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780056
product: uncharacterized LOC116780056
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004354299.1
SIO_010081: LOC116780056
subclass of: SO_0000673
so part of: LOC116780056
location: complement(join(7270475..7270579,7280260..7280263,7280913..7281102))
location: region:7270475-7281102:-1
so has part: feature:7280913-7281102:-1:exon
so has part: feature:7280260-7280263:-1:exon
so has part: feature:7270475-7270579:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7280913-7281102:-1:exon

position:7280913:-1
position: 7280913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7280260-7280263:-1:exon

position:7280260:-1
position: 7280260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7280263:-1
position: 7280263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7270475-7270579:-1:exon

position:7270579:-1
position: 7270579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116779984
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779984
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7354038..7357322
location: region:7354038-7357322:1
so has part: feature:7354038-7357322:1:exon
subclass of: SO_0000010

116779984
type: Gene
SIO_000068: ncbigene

position:7354038:1
position: 7354038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7357322:1
position: 7357322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7354038-7357322:1:exon

LOC116779984
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779984
product: protein NYNRIN-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674487.1
SIO_010081: LOC116779984
subclass of: SO_0000673
so part of: LOC116779984
location: 7354038..7357322
location: region:7354038-7357322:1
so has part: feature:7354038-7357322:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7354038-7357322:1:exon

LOC116779984
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779984
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NYNRIN-like
translation: MPNSPKPLLGRDLLEKLEAEIKFTKGGDIKVIIPDTKYVEAAAFFIQENHGEIPAEVENAVIPLVWASKYPGKSKQAEPVSIALRPGAVPVRQKQYPLKLESRKGLAPIIEKFLKFGLLVECESRFNTPILPVKKADGKSYRLVQDLRAINKITEDIYPVVANPYTLLTTLTEDLGWFTVLDLKDAFFCIPVHKDSQEIFAFEWENPETGRKTQLTWRVLPQGFKNSPTLFGNQLAKELEDWRRQQQEGVVLQYVDDILIAAKSRDQCIELTVSLLNFLGLSGYRVSREKAQIAKEIVIYLGLEIYRGHRRLSTDRKEAICRLPEPHTVREMQAFLGMVGWCRLWIANYGLLVKPLYEALKTAKEGVVTWTDETRDVFQQLKQSLMSAPALGLPDLTKPFELFTHEQLNVALGVLSQTLGSQRRAVAYFSKQLDSVSQGWPGCLRTVAATVILIEEARKLTLGQRITVYVPHAVQAVLEQKGGHWLSPSRMLKYQVVLLEQDDVTLKTTSIVNPAMFLSSTLTDSVPEHDCLQTIEETYSSRPDLKDVPLENADWELYTDGSSFMRDGKRFTGYAVTTRDEVIEAKALPADVSSQKAELIALTRALELSEGKKVNIWTDSKYAFSVVHAHGAIWKERGLLTAQGSGVKHADQIHALLQSIWKPEEVAIMHCRAHQKGKTIPELGNQFADQAAKGAAEKGILAIVPQKEVDLTKYTPKYDERDNQLIRSLKAEIKEGGWAVTPTGQVVVPPLLLREIAQQEHEATHWGTENLLKHLKKTVIGTNMTEAVQSIVGKCEICKRNNPDTSKRVVLGVTKVGDQPGDYWQIDFAELPPWGGYKYILVLVDTFSGWPEAYPCRTNTAREVVKALLNHIIPRFGVPLGMASDRGTHFIATVVKEVCRILGIVWDLHTPYRPQASGKVERMNGTLKMQISKICQETSMSWVQALPLALLRIRIQPRRRDNISPYEILYGRPYQAPHIPGDVHLRGRTDLRKYLIALGSTLQKLQKVIELSRPIGLDTPAHPFQPGDWVYVKWWNSDPLRAKWRGPYQVLLTSLTAVKVAGREPWFHYSRVKRASAPGTTSQPELDTDDDDVE
SIO_010081: LOC116779984
subclass of: SO_0000673
so part of: LOC116779984
location: 7354038..7357322
location: region:7354038-7357322:1
so has part: feature:7354038-7357322:1:exon

XP_032530378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7354038-7357322:1:exon

LOC116779985
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779985
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7442864..7445287)
location: region:7442864-7445287:-1
so has part: feature:7442864-7445287:-1:exon
subclass of: SO_0000010

116779985
type: Gene
SIO_000068: ncbigene

position:7442864:-1
position: 7442864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7445287:-1
position: 7445287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7442864-7445287:-1:exon

LOC116779985
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779985
product: uncharacterized LOC116779985
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 7% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674488.1
SIO_010081: LOC116779985
subclass of: SO_0000673
so part of: LOC116779985
location: complement(join(7442864..7443165,7443909..7444026,7444064..7445287))
location: region:7442864-7445287:-1
so has part: feature:7444064-7445287:-1:exon
so has part: feature:7443909-7444026:-1:exon
so has part: feature:7442864-7443165:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7444064-7445287:-1:exon

position:7444064:-1
position: 7444064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7443909-7444026:-1:exon

position:7443909:-1
position: 7443909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7444026:-1
position: 7444026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7442864-7443165:-1:exon

position:7443165:-1
position: 7443165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116779985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779985
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(7444922..7444924),aa:OTHER)
product: LOW QUALITY PROTEIN: uncharacterized protein LOC116779985
translation: MEHNVQALTNLLDEFGARPSPPEMEWAQDNWYNIQAIVYRISTLQTGARKGKGKPIVCSILGAVIITAINNKEQQQKAHMKVVNSLQDSVKSLQMQLEEREATVTVLQEEIRNERATARVLXEELYARLMREGKRELELESPKEIYPLSDLKPLRDQVEKLSVSLHPLIKTEYTYEGSDNDTPQITTKEVPYTVTELAKLKKECSRTPKETETEYVWRVSLTGGDQILLLEKEVEGFWGARVFLTTGDNCAPWSLTQRAAYWAGGLNPLERGDPLAIVGNVNQIVESVQKAACLQMMYDRELTPRCESPMMLPVDPERMIPLIRGLPEAMKPIGIQLKGQIESLTKGERTATTLEAALTPSRYCGENKIWTWVEVAQELINYGREYGPVPSITTDTKSIRHTECKSTPEDPLTLGDTGEKRNDLWIVGLQKGIPKSLMDGQPTDKLEKEQVTHAEEAPPYNQLPENEKRYAVFTDGSYYIGCWNGDPAADSRIHGRTTCGCAVRPGSRGNGSRGNGRHTVRGQGFNRVAPSTAGVGLGQTGVGQMVA
SIO_010081: LOC116779985
subclass of: SO_0000673
so part of: LOC116779985
location: complement(join(7442864..7443165,7443909..7444026,7444064..7445287))
location: region:7442864-7445287:-1
so has part: feature:7444064-7445287:-1:exon
so has part: feature:7443909-7444026:-1:exon
so has part: feature:7442864-7443165:-1:exon

XP_032530379.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7444064-7445287:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7443909-7444026:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7442864-7443165:-1:exon

LOC116780052
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780052
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7560382..7578560
location: region:7560382-7578560:1
so has part: feature:7560382-7578560:1:exon
subclass of: SO_0000011

116780052
type: Gene
SIO_000068: ncbigene

position:7560382:1
position: 7560382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7578560:1
position: 7578560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7560382-7578560:1:exon

LOC116780052
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780052
product: uncharacterized LOC116780052
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004354295.1
SIO_010081: LOC116780052
subclass of: SO_0000673
so part of: LOC116780052
location: join(7560382..7560507,7578465..7578469,7578550..7578560)
location: region:7560382-7578560:1
so has part: feature:7560382-7560507:1:exon
so has part: feature:7578465-7578469:1:exon
so has part: feature:7578550-7578560:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7560382-7560507:1:exon

position:7560507:1
position: 7560507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7578465-7578469:1:exon

position:7578465:1
position: 7578465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7578469:1
position: 7578469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7578550-7578560:1:exon

position:7578550:1
position: 7578550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116779986
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779986
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 7595344..7596388
location: region:7595344-7596388:1
so has part: feature:7595344-7596388:1:exon

116779986
type: Gene
SIO_000068: ncbigene

position:7595344:1
position: 7595344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7596388:1
position: 7596388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7595344-7596388:1:exon

LOC116779986
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779986
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 long SRA reads, 6 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116779986
subclass of: SO_0000673
so part of: LOC116779986
location: 7595344..7596388
location: region:7595344-7596388:1
so has part: feature:7595344-7596388:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7595344-7596388:1:exon

LOC116780037
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780037
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 7602899..7604041
location: region:7602899-7604041:1
so has part: feature:7602899-7604041:1:exon

116780037
type: Gene
SIO_000068: ncbigene

position:7602899:1
position: 7602899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7604041:1
position: 7604041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7602899-7604041:1:exon

LOC116780037
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 296741
gene: LOC116780037
product: NADH-ubiquinone oxidoreductase chain 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_004354292.1
SIO_010081: LOC116780037
so part of: LOC116780037
location: 7602899..7604041
location: region:7602899-7604041:1
so has part: feature:7602899-7604041:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7602899-7604041:1:exon

LOC116780059
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780059
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7606764..7633321)
location: region:7606764-7633321:-1
so has part: feature:7606764-7633321:-1:exon
subclass of: SO_0000011

116780059
type: Gene
SIO_000068: ncbigene

position:7606764:-1
position: 7606764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7633321:-1
position: 7633321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7606764-7633321:-1:exon

LOC116780059
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780059
product: uncharacterized LOC116780059
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004354302.1
SIO_010081: LOC116780059
subclass of: SO_0000673
so part of: LOC116780059
location: complement(join(7606764..7607064,7608768..7608770,7617058..7617077,7633157..7633161,7633309..7633321))
location: region:7606764-7633321:-1
so has part: feature:7633309-7633321:-1:exon
so has part: feature:7633157-7633161:-1:exon
so has part: feature:7617058-7617077:-1:exon
so has part: feature:7608768-7608770:-1:exon
so has part: feature:7606764-7607064:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7633309-7633321:-1:exon

position:7633309:-1
position: 7633309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7633157-7633161:-1:exon

position:7633157:-1
position: 7633157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7633161:-1
position: 7633161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7617058-7617077:-1:exon

position:7617058:-1
position: 7617058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7617077:-1
position: 7617077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7608768-7608770:-1:exon

position:7608768:-1
position: 7608768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7608770:-1
position: 7608770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7606764-7607064:-1:exon

position:7607064:-1
position: 7607064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116780058
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780058
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7782843..7795494)
location: region:7782843-7795494:-1
so has part: feature:7782843-7795494:-1:exon
subclass of: SO_0000011

116780058
type: Gene
SIO_000068: ncbigene

position:7782843:-1
position: 7782843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7795494:-1
position: 7795494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7782843-7795494:-1:exon

LOC116780058
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780058
product: uncharacterized LOC116780058
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004354301.1
SIO_010081: LOC116780058
subclass of: SO_0000673
so part of: LOC116780058
location: complement(join(7782843..7782978,7794710..7794718,7795483..7795494))
location: region:7782843-7795494:-1
so has part: feature:7795483-7795494:-1:exon
so has part: feature:7794710-7794718:-1:exon
so has part: feature:7782843-7782978:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7795483-7795494:-1:exon

position:7795483:-1
position: 7795483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7794710-7794718:-1:exon

position:7794710:-1
position: 7794710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7794718:-1
position: 7794718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7782843-7782978:-1:exon

position:7782978:-1
position: 7782978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116780073
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780073
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7925283..7936193)
location: region:7925283-7936193:-1
so has part: feature:7925283-7936193:-1:exon
subclass of: SO_0000011

116780073
type: Gene
SIO_000068: ncbigene

position:7925283:-1
position: 7925283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7936193:-1
position: 7936193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7925283-7936193:-1:exon

LOC116780073
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780073
product: uncharacterized LOC116780073
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004354315.1
SIO_010081: LOC116780073
subclass of: SO_0000673
so part of: LOC116780073
location: complement(join(7925283..7925373,7928182..7928186,7936182..7936193))
location: region:7925283-7936193:-1
so has part: feature:7936182-7936193:-1:exon
so has part: feature:7928182-7928186:-1:exon
so has part: feature:7925283-7925373:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7936182-7936193:-1:exon

position:7936182:-1
position: 7936182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7928182-7928186:-1:exon

position:7928182:-1
position: 7928182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7928186:-1
position: 7928186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7925283-7925373:-1:exon

position:7925373:-1
position: 7925373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116780030
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780030
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7943877..8037700)
location: region:7943877-8037700:-1
so has part: feature:7943877-8037700:-1:exon
subclass of: SO_0000010

116780030
type: Gene
SIO_000068: ncbigene

position:7943877:-1
position: 7943877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8037700:-1
position: 8037700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7943877-8037700:-1:exon

LOC116780030
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116780030
product: kinesin-like protein KIF2A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674533.1
SIO_010081: LOC116780030
subclass of: SO_0000673
so part of: LOC116780030
location: complement(join(7943877..7943962,7945780..7945915,7948098..7948199,7949776..7949926,7953022..7953089,7958019..7958129,7965571..7965775,7966450..7966592,7966895..7966986,7968499..7968562,7968710..7968800,7971982..7972144,7976148..7976202,7978794..7978889,7988151..7988251,7988881..7988946,7991059..7991113,7991555..7991674,7993665..7993759,8037637..8037700))
location: region:7943877-8037700:-1
so has part: feature:8037637-8037700:-1:exon
so has part: feature:7993665-7993759:-1:exon
so has part: feature:7991555-7991674:-1:exon
so has part: feature:7991059-7991113:-1:exon
so has part: feature:7988881-7988946:-1:exon
so has part: feature:7988151-7988251:-1:exon
so has part: feature:7978794-7978889:-1:exon
so has part: feature:7976148-7976202:-1:exon
so has part: feature:7971982-7972144:-1:exon
so has part: feature:7968710-7968800:-1:exon
so has part: feature:7968499-7968562:-1:exon
so has part: feature:7966895-7966986:-1:exon
so has part: feature:7966450-7966592:-1:exon
so has part: feature:7965571-7965775:-1:exon
so has part: feature:7958019-7958129:-1:exon
so has part: feature:7953022-7953089:-1:exon
so has part: feature:7949776-7949926:-1:exon
so has part: feature:7948098-7948199:-1:exon
so has part: feature:7945780-7945915:-1:exon
so has part: feature:7943877-7943962:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8037637-8037700:-1:exon

position:8037637:-1
position: 8037637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7993665-7993759:-1:exon

position:7993665:-1
position: 7993665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7993759:-1
position: 7993759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7991555-7991674:-1:exon

position:7991555:-1
position: 7991555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7991674:-1
position: 7991674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7991059-7991113:-1:exon

position:7991059:-1
position: 7991059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7991113:-1
position: 7991113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7988881-7988946:-1:exon

position:7988881:-1
position: 7988881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7988946:-1
position: 7988946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7988151-7988251:-1:exon

position:7988151:-1
position: 7988151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7988251:-1
position: 7988251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7978794-7978889:-1:exon

position:7978794:-1
position: 7978794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7978889:-1
position: 7978889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7976148-7976202:-1:exon

position:7976148:-1
position: 7976148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7976202:-1
position: 7976202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7971982-7972144:-1:exon

position:7971982:-1
position: 7971982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7972144:-1
position: 7972144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7968710-7968800:-1:exon

position:7968710:-1
position: 7968710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7968800:-1
position: 7968800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7968499-7968562:-1:exon

position:7968499:-1
position: 7968499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7968562:-1
position: 7968562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7966895-7966986:-1:exon

position:7966895:-1
position: 7966895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7966986:-1
position: 7966986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7966450-7966592:-1:exon

position:7966450:-1
position: 7966450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7966592:-1
position: 7966592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7965571-7965775:-1:exon

position:7965571:-1
position: 7965571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7965775:-1
position: 7965775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7958019-7958129:-1:exon

position:7958019:-1
position: 7958019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7958129:-1
position: 7958129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7953022-7953089:-1:exon

position:7953022:-1
position: 7953022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7953089:-1
position: 7953089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7949776-7949926:-1:exon

position:7949776:-1
position: 7949776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7949926:-1
position: 7949926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7948098-7948199:-1:exon

position:7948098:-1
position: 7948098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7948199:-1
position: 7948199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7945780-7945915:-1:exon

position:7945780:-1
position: 7945780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7945915:-1
position: 7945915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7943877-7943962:-1:exon

position:7943962:-1
position: 7943962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116780030
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116780030
product: kinesin-like protein KIF2A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 23% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674532.1
SIO_010081: LOC116780030
subclass of: SO_0000673
so part of: LOC116780030
location: complement(join(7943877..7943962,7945780..7945915,7948098..7948199,7949776..7949926,7953022..7953089,7958019..7958129,7965571..7965775,7966450..7966592,7966895..7966986,7968499..7968562,7968710..7968800,7971982..7972144,7976148..7976202,7978794..7978889,7988151..7988251,7988824..7988946,7991059..7991113,7991555..7991674,7993665..7993759,8037637..8037700))
location: region:7943877-8037700:-1
so has part: feature:8037637-8037700:-1:exon
so has part: feature:7993665-7993759:-1:exon
so has part: feature:7991555-7991674:-1:exon
so has part: feature:7991059-7991113:-1:exon
so has part: feature:7988824-7988946:-1:exon
so has part: feature:7988151-7988251:-1:exon
so has part: feature:7978794-7978889:-1:exon
so has part: feature:7976148-7976202:-1:exon
so has part: feature:7971982-7972144:-1:exon
so has part: feature:7968710-7968800:-1:exon
so has part: feature:7968499-7968562:-1:exon
so has part: feature:7966895-7966986:-1:exon
so has part: feature:7966450-7966592:-1:exon
so has part: feature:7965571-7965775:-1:exon
so has part: feature:7958019-7958129:-1:exon
so has part: feature:7953022-7953089:-1:exon
so has part: feature:7949776-7949926:-1:exon
so has part: feature:7948098-7948199:-1:exon
so has part: feature:7945780-7945915:-1:exon
so has part: feature:7943877-7943962:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8037637-8037700:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7993665-7993759:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7991555-7991674:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7991059-7991113:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7988824-7988946:-1:exon

position:7988824:-1
position: 7988824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7988151-7988251:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7978794-7978889:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7976148-7976202:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7971982-7972144:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7968710-7968800:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7968499-7968562:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7966895-7966986:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7966450-7966592:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7965571-7965775:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7958019-7958129:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7953022-7953089:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7949776-7949926:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7948098-7948199:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7945780-7945915:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7943877-7943962:-1:exon

LOC116780030
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116780030
product: kinesin-like protein KIF2A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 25% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674531.1
SIO_010081: LOC116780030
subclass of: SO_0000673
so part of: LOC116780030
location: complement(join(7943877..7943962,7945780..7945915,7948098..7948199,7949776..7949926,7951129..7951242,7953022..7953089,7958019..7958129,7965571..7965775,7966450..7966592,7966895..7966986,7968499..7968562,7968710..7968800,7971982..7972144,7976148..7976202,7978794..7978889,7988151..7988251,7988824..7988946,7991059..7991113,7991555..7991674,7993665..7993759,8037637..8037700))
location: region:7943877-8037700:-1
so has part: feature:8037637-8037700:-1:exon
so has part: feature:7993665-7993759:-1:exon
so has part: feature:7991555-7991674:-1:exon
so has part: feature:7991059-7991113:-1:exon
so has part: feature:7988824-7988946:-1:exon
so has part: feature:7988151-7988251:-1:exon
so has part: feature:7978794-7978889:-1:exon
so has part: feature:7976148-7976202:-1:exon
so has part: feature:7971982-7972144:-1:exon
so has part: feature:7968710-7968800:-1:exon
so has part: feature:7968499-7968562:-1:exon
so has part: feature:7966895-7966986:-1:exon
so has part: feature:7966450-7966592:-1:exon
so has part: feature:7965571-7965775:-1:exon
so has part: feature:7958019-7958129:-1:exon
so has part: feature:7953022-7953089:-1:exon
so has part: feature:7951129-7951242:-1:exon
so has part: feature:7949776-7949926:-1:exon
so has part: feature:7948098-7948199:-1:exon
so has part: feature:7945780-7945915:-1:exon
so has part: feature:7943877-7943962:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8037637-8037700:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7993665-7993759:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7991555-7991674:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7991059-7991113:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7988824-7988946:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7988151-7988251:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7978794-7978889:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7976148-7976202:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7971982-7972144:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7968710-7968800:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7968499-7968562:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7966895-7966986:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7966450-7966592:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7965571-7965775:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7958019-7958129:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7953022-7953089:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7951129-7951242:-1:exon

position:7951129:-1
position: 7951129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7951242:-1
position: 7951242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7949776-7949926:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7948098-7948199:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7945780-7945915:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7943877-7943962:-1:exon

LOC116780030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116780030
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein KIF2A isoform X3
translation: MATANFSKVQIGIYVEIKRSDGRIHQAMVTSLNEDNESVTVEWIENGDTKGKEIDLESIFSLNPYLAPDEDIEPSPETPPPPTPATKVNKIVKSRRTVAPIKNDTPARDNRVVGSARTRPTQLPEQSSSSQQNARRKSNCVKEVEKLQEKREKRRLQQQELREKRAQDVDATNPNYEIMCMIRDFRGSLDYRPLTTTDPIDEHKICVCVRKRPLNKKETLMKDLDVITIPNKDVVMVHEPKQKVDLTRYLENQTFRFDYAFDDTAPNEMVYRFTARPLVETIFERGMATCFAYGQTGSGKTHTMGGDFSGKKQDCSKGIYALAARDVFLMLKKPNYKKLELQVYATFFEIYSGKVFDLLNRKAKLRVLEDGKQQVQVVGLQEREVKCVEDVLKLIEIGNSCRTSGQTSANAHSSRSHAVFQIILRRKGKLHGKFSLIDLAGNERGADTSSADRQTRLEGAEINKSLLALKECIRALGRNKPHTPFRASKLTQVLRDSFIGENSRTCMIATISPGMASCENTLNTLRYANRVKELMVDPSASGDICPIIHHAPNQIDDLEAQWGVGSSPQRDDLKLLCEQNEEEVSPQLFTFHEAVSQMVEMEEQVLEDHRAIFQESIRWLEDEKALLEMTEEVDYDVDSYATQLEAILEQKIDILTELRDKVKSFRAALQEEEQASKQINPKRPRAL
SIO_010081: LOC116780030
subclass of: SO_0000673
so part of: LOC116780030
location: complement(join(7943877..7943962,7945780..7945915,7948098..7948199,7949776..7949926,7953022..7953089,7958019..7958129,7965571..7965775,7966450..7966592,7966895..7966986,7968499..7968562,7968710..7968800,7971982..7972144,7976148..7976202,7978794..7978889,7988151..7988251,7988881..7988946,7991059..7991113,7991555..7991674,7993665..7993759,8037637..8037700))
location: region:7943877-8037700:-1
so has part: feature:8037637-8037700:-1:exon
so has part: feature:7993665-7993759:-1:exon
so has part: feature:7991555-7991674:-1:exon
so has part: feature:7991059-7991113:-1:exon
so has part: feature:7988881-7988946:-1:exon
so has part: feature:7988151-7988251:-1:exon
so has part: feature:7978794-7978889:-1:exon
so has part: feature:7976148-7976202:-1:exon
so has part: feature:7971982-7972144:-1:exon
so has part: feature:7968710-7968800:-1:exon
so has part: feature:7968499-7968562:-1:exon
so has part: feature:7966895-7966986:-1:exon
so has part: feature:7966450-7966592:-1:exon
so has part: feature:7965571-7965775:-1:exon
so has part: feature:7958019-7958129:-1:exon
so has part: feature:7953022-7953089:-1:exon
so has part: feature:7949776-7949926:-1:exon
so has part: feature:7948098-7948199:-1:exon
so has part: feature:7945780-7945915:-1:exon
so has part: feature:7943877-7943962:-1:exon

XP_032530424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8037637-8037700:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7993665-7993759:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7991555-7991674:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7991059-7991113:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7988881-7988946:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7988151-7988251:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7978794-7978889:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7976148-7976202:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7971982-7972144:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7968710-7968800:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7968499-7968562:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7966895-7966986:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7966450-7966592:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7965571-7965775:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7958019-7958129:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7953022-7953089:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7949776-7949926:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7948098-7948199:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7945780-7945915:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7943877-7943962:-1:exon

LOC116780030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116780030
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein KIF2A isoform X2
translation: MATANFSKVQIGIYVEIKRSDGRIHQAMVTSLNEDNESVTVEWIENGDTKGKEIDLESIFSLNPYLAPDEDIEPSPETPPPPTPATKVNKIVKSRRTVAPIKNDTPARDNRVVGSARTRPTQLPEQSSSSQQNGSVSDISPVQAAKKEFGPPSRRKSNCVKEVEKLQEKREKRRLQQQELREKRAQDVDATNPNYEIMCMIRDFRGSLDYRPLTTTDPIDEHKICVCVRKRPLNKKETLMKDLDVITIPNKDVVMVHEPKQKVDLTRYLENQTFRFDYAFDDTAPNEMVYRFTARPLVETIFERGMATCFAYGQTGSGKTHTMGGDFSGKKQDCSKGIYALAARDVFLMLKKPNYKKLELQVYATFFEIYSGKVFDLLNRKAKLRVLEDGKQQVQVVGLQEREVKCVEDVLKLIEIGNSCRTSGQTSANAHSSRSHAVFQIILRRKGKLHGKFSLIDLAGNERGADTSSADRQTRLEGAEINKSLLALKECIRALGRNKPHTPFRASKLTQVLRDSFIGENSRTCMIATISPGMASCENTLNTLRYANRVKELMVDPSASGDICPIIHHAPNQIDDLEAQWGVGSSPQRDDLKLLCEQNEEEVSPQLFTFHEAVSQMVEMEEQVLEDHRAIFQESIRWLEDEKALLEMTEEVDYDVDSYATQLEAILEQKIDILTELRDKVKSFRAALQEEEQASKQINPKRPRAL
SIO_010081: LOC116780030
subclass of: SO_0000673
so part of: LOC116780030
location: complement(join(7943877..7943962,7945780..7945915,7948098..7948199,7949776..7949926,7953022..7953089,7958019..7958129,7965571..7965775,7966450..7966592,7966895..7966986,7968499..7968562,7968710..7968800,7971982..7972144,7976148..7976202,7978794..7978889,7988151..7988251,7988824..7988946,7991059..7991113,7991555..7991674,7993665..7993759,8037637..8037700))
location: region:7943877-8037700:-1
so has part: feature:8037637-8037700:-1:exon
so has part: feature:7993665-7993759:-1:exon
so has part: feature:7991555-7991674:-1:exon
so has part: feature:7991059-7991113:-1:exon
so has part: feature:7988824-7988946:-1:exon
so has part: feature:7988151-7988251:-1:exon
so has part: feature:7978794-7978889:-1:exon
so has part: feature:7976148-7976202:-1:exon
so has part: feature:7971982-7972144:-1:exon
so has part: feature:7968710-7968800:-1:exon
so has part: feature:7968499-7968562:-1:exon
so has part: feature:7966895-7966986:-1:exon
so has part: feature:7966450-7966592:-1:exon
so has part: feature:7965571-7965775:-1:exon
so has part: feature:7958019-7958129:-1:exon
so has part: feature:7953022-7953089:-1:exon
so has part: feature:7949776-7949926:-1:exon
so has part: feature:7948098-7948199:-1:exon
so has part: feature:7945780-7945915:-1:exon
so has part: feature:7943877-7943962:-1:exon

XP_032530423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8037637-8037700:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7993665-7993759:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7991555-7991674:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7991059-7991113:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7988824-7988946:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7988151-7988251:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7978794-7978889:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7976148-7976202:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7971982-7972144:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7968710-7968800:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7968499-7968562:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7966895-7966986:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7966450-7966592:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7965571-7965775:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7958019-7958129:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7953022-7953089:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7949776-7949926:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7948098-7948199:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7945780-7945915:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7943877-7943962:-1:exon

LOC116780030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116780030
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein KIF2A isoform X1
translation: MATANFSKVQIGIYVEIKRSDGRIHQAMVTSLNEDNESVTVEWIENGDTKGKEIDLESIFSLNPYLAPDEDIEPSPETPPPPTPATKVNKIVKSRRTVAPIKNDTPARDNRVVGSARTRPTQLPEQSSSSQQNGSVSDISPVQAAKKEFGPPSRRKSNCVKEVEKLQEKREKRRLQQQELREKRAQDVDATNPNYEIMCMIRDFRGSLDYRPLTTTDPIDEHKICVCVRKRPLNKKETLMKDLDVITIPNKDVVMVHEPKQKVDLTRYLENQTFRFDYAFDDTAPNEMVYRFTARPLVETIFERGMATCFAYGQTGSGKTHTMGGDFSGKKQDCSKGIYALAARDVFLMLKKPNYKKLELQVYATFFEIYSGKVFDLLNRKAKLRVLEDGKQQVQVVGLQEREVKCVEDVLKLIEIGNSCRTSGQTSANAHSSRSHAVFQIILRRKGKLHGKFSLIDLAGNERGADTSSADRQTRLEGAEINKSLLALKECIRALGRNKPHTPFRASKLTQVLRDSFIGENSRTCMIATISPGMASCENTLNTLRYANRVKEFGISPSDIPFSQGSGSRSDLSPSYEYDDFSPSITRVKELMVDPSASGDICPIIHHAPNQIDDLEAQWGVGSSPQRDDLKLLCEQNEEEVSPQLFTFHEAVSQMVEMEEQVLEDHRAIFQESIRWLEDEKALLEMTEEVDYDVDSYATQLEAILEQKIDILTELRDKVKSFRAALQEEEQASKQINPKRPRAL
SIO_010081: LOC116780030
subclass of: SO_0000673
so part of: LOC116780030
location: complement(join(7943877..7943962,7945780..7945915,7948098..7948199,7949776..7949926,7951129..7951242,7953022..7953089,7958019..7958129,7965571..7965775,7966450..7966592,7966895..7966986,7968499..7968562,7968710..7968800,7971982..7972144,7976148..7976202,7978794..7978889,7988151..7988251,7988824..7988946,7991059..7991113,7991555..7991674,7993665..7993759,8037637..8037700))
location: region:7943877-8037700:-1
so has part: feature:8037637-8037700:-1:exon
so has part: feature:7993665-7993759:-1:exon
so has part: feature:7991555-7991674:-1:exon
so has part: feature:7991059-7991113:-1:exon
so has part: feature:7988824-7988946:-1:exon
so has part: feature:7988151-7988251:-1:exon
so has part: feature:7978794-7978889:-1:exon
so has part: feature:7976148-7976202:-1:exon
so has part: feature:7971982-7972144:-1:exon
so has part: feature:7968710-7968800:-1:exon
so has part: feature:7968499-7968562:-1:exon
so has part: feature:7966895-7966986:-1:exon
so has part: feature:7966450-7966592:-1:exon
so has part: feature:7965571-7965775:-1:exon
so has part: feature:7958019-7958129:-1:exon
so has part: feature:7953022-7953089:-1:exon
so has part: feature:7951129-7951242:-1:exon
so has part: feature:7949776-7949926:-1:exon
so has part: feature:7948098-7948199:-1:exon
so has part: feature:7945780-7945915:-1:exon
so has part: feature:7943877-7943962:-1:exon

XP_032530422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8037637-8037700:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7993665-7993759:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7991555-7991674:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7991059-7991113:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7988824-7988946:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7988151-7988251:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7978794-7978889:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7976148-7976202:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7971982-7972144:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7968710-7968800:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7968499-7968562:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7966895-7966986:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7966450-7966592:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7965571-7965775:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7958019-7958129:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7953022-7953089:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7951129-7951242:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7949776-7949926:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7948098-7948199:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7945780-7945915:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7943877-7943962:-1:exon

LOC116780062
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780062
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7965049..7978529
location: region:7965049-7978529:1
so has part: feature:7965049-7978529:1:exon
subclass of: SO_0000011

116780062
type: Gene
SIO_000068: ncbigene

position:7965049:1
position: 7965049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7978529:1
position: 7978529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7965049-7978529:1:exon

LOC116780062
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780062
product: uncharacterized LOC116780062
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004354305.1
SIO_010081: LOC116780062
subclass of: SO_0000673
so part of: LOC116780062
location: join(7965049..7965203,7972747..7972748,7978518..7978529)
location: region:7965049-7978529:1
so has part: feature:7965049-7965203:1:exon
so has part: feature:7972747-7972748:1:exon
so has part: feature:7978518-7978529:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7965049-7965203:1:exon

position:7965203:1
position: 7965203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7972747-7972748:1:exon

position:7972747:1
position: 7972747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7972748:1
position: 7972748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7978518-7978529:1:exon

position:7978518:1
position: 7978518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116779987
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779987
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8043381..8067417)
location: region:8043381-8067417:-1
so has part: feature:8043381-8067417:-1:exon
subclass of: SO_0000010

116779987
type: Gene
SIO_000068: ncbigene

position:8043381:-1
position: 8043381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8067417:-1
position: 8067417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8043381-8067417:-1:exon

LOC116779987
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779987
product: uncharacterized LOC116779987
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 21% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674490.1
SIO_010081: LOC116779987
subclass of: SO_0000673
so part of: LOC116779987
location: complement(join(8043381..8044032,8063270..8063426,8064750..8065035,8065210..8065444,8065667..8066378,8067375..8067417))
location: region:8043381-8067417:-1
so has part: feature:8067375-8067417:-1:exon
so has part: feature:8065667-8066378:-1:exon
so has part: feature:8065210-8065444:-1:exon
so has part: feature:8064750-8065035:-1:exon
so has part: feature:8063270-8063426:-1:exon
so has part: feature:8043381-8044032:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8067375-8067417:-1:exon

position:8067375:-1
position: 8067375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8065667-8066378:-1:exon

position:8065667:-1
position: 8065667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8066378:-1
position: 8066378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8065210-8065444:-1:exon

position:8065210:-1
position: 8065210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8065444:-1
position: 8065444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8064750-8065035:-1:exon

position:8064750:-1
position: 8064750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8065035:-1
position: 8065035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8063270-8063426:-1:exon

position:8063270:-1
position: 8063270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8063426:-1
position: 8063426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8043381-8044032:-1:exon

position:8044032:-1
position: 8044032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116779987
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779987
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(8065870..8065872),aa:OTHER)
product: LOW QUALITY PROTEIN: uncharacterized protein LOC116779987
translation: MWDTKNTKLVKVILKVEKEEIPQEIEQAVVPWVWETGVPGKSKAATPVRIELKEGTQPVRVRQYPISLEARKGIAPMISQFLILGILKECESEFNTPIFPVRKPNGKYRLVQDLRAVNLITKDIHSVVANPYTLLTSVSERFQWFTVIDLKDAFFCIPLAPESWKIFAFEWENPETGRKRQLTXTRLPQGFKCSPTIFGNQLAKELEEWKTTQVKESPFSYIILQYVDDIFLGATEQGLCRQLTIELLNMLGPLYEAVKEPKLTWGTKQEKAFQELKRTLQEAPALGLPDLTKEFQLYVCERQRTALGVLTQRLGSWKRPVGYFSKRLDAYQALLREQDELKITNHLNPAEFLRSTKEEGVLEHDCVETIEQVYASRKDLKDEPLTDPDWELYTDGSSFVENGTRYAGYAVVTLQQVIEANALPPGDQVYVKNWSVEPLKETWDGPRQVIMTTYTAVKVEGIDNWIHYTRIKKVPVSCFLLLFHGGAAPAGKAPPVSPLSCNGRARGHNRARKARAAREGAAAARASVHEGQGPPQQGVPPPEKREGAAAARASVHEGQGPPQQGVPTPEKREGAAAARASVHEGQGPPQQGVPTPEKREGAAAARTSVHEGQGPPQQGVPPPEKREGAAAARASVHEGQGPLQQGVPPPEKREGAAAARASVHEGQGPPQQGVPPPEKREGRGRRAELNTHPK
SIO_010081: LOC116779987
subclass of: SO_0000673
so part of: LOC116779987
location: complement(join(8043381..8044032,8063270..8063426,8064750..8065035,8065210..8065444,8065667..8066378,8067375..8067417))
location: region:8043381-8067417:-1
so has part: feature:8067375-8067417:-1:exon
so has part: feature:8065667-8066378:-1:exon
so has part: feature:8065210-8065444:-1:exon
so has part: feature:8064750-8065035:-1:exon
so has part: feature:8063270-8063426:-1:exon
so has part: feature:8043381-8044032:-1:exon

XP_032530381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8067375-8067417:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8065667-8066378:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8065210-8065444:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8064750-8065035:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8063270-8063426:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8043381-8044032:-1:exon

LOC116780026
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780026
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8187003..8591694)
location: region:8187003-8591694:-1
so has part: feature:8187003-8591694:-1:exon
subclass of: SO_0000010

116780026
type: Gene
SIO_000068: ncbigene

position:8187003:-1
position: 8187003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8591694:-1
position: 8591694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8187003-8591694:-1:exon

LOC116780026
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116780026
product: SET-binding protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 7% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674528.1
SIO_010081: LOC116780026
subclass of: SO_0000673
so part of: LOC116780026
location: complement(join(8187003..8187481,8217184..8217351,8300593..8304031,8420091..8420162,8591203..8591694))
location: region:8187003-8591694:-1
so has part: feature:8591203-8591694:-1:exon
so has part: feature:8420091-8420162:-1:exon
so has part: feature:8300593-8304031:-1:exon
so has part: feature:8217184-8217351:-1:exon
so has part: feature:8187003-8187481:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8591203-8591694:-1:exon

position:8591203:-1
position: 8591203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8420091-8420162:-1:exon

position:8420091:-1
position: 8420091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8420162:-1
position: 8420162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8300593-8304031:-1:exon

position:8300593:-1
position: 8300593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8304031:-1
position: 8304031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8217184-8217351:-1:exon

position:8217184:-1
position: 8217184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8217351:-1
position: 8217351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8187003-8187481:-1:exon

position:8187481:-1
position: 8187481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116780026
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116780026
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SET-binding protein-like
translation: MEPRETLGSSWQRRGEADFLPAAVTSVKPLSASGCAGEMMLPMAGSGKEILVSGEKLEPEEEDELGSRRDVDSTSNADSEKWVVGDGLEEQEFSIKEANFTEGSLKLKIQTTKRTKKPPKNLENYICPPEIKITIKQSGDQKLSRAGKNSKAAKEEDRLHSRKKSQMKNLGSEYGFPVQNPVTKTVNKVYDRPQKHSVLHYDPGLQQDFTIDTLKSKHQKKSSNQHHLDWSASSDTGSTSQSCFVNTEPSREAVSATKVSTLEPGVSFSKSQAKKSCTSSTWGQMSASSKELAICSAVPCPNSISVATQLSSASECNGLLPLGDQEVGVELEAPNRPTRSTKKSSKKDFVSQTIQTTDTEWVKSTQKAFDSKSHYSMEGKKESYSMDSVLDTSPLKQNSASANSCESDASHIQITLPIKSPTTDTSGHKRKQRHSTKSFIEKTIQVKSLPSGLAMSNEVANRTSSQPEGSKKDLRATKPGKVIENESPLVAIDSGVLTDKASPSCATRLRKSVSVTSTLVPTDLPTTGKLSEVQHPKHAAEWQWTCNKPKSILRDTSTTTSDKLMVEPPSAYPITRSSPLYTNTDSLTVITPLKKKRGRPKKQPLLTVETIHEGTSTSPVSPINREFAGTKKRKRRRNLAKLAQMVPGEDKSISELKFHKKVRKLGVLDKKTIKTINKMKTLKRKNILSQILSSCSSSIALKEKVQTLSSAGPTTIDARLGKQINVSKRGTIYIGKKRGRKPRTELQTQPEEPKTAIKHSRPVSSQPENPSVPSNLQSLAAIHPLSTELLGTNSNLSPASTETNFSELKTMPNLQPISALPTKTQKGMHSGTWKLSPPRLTANSPSHLCEIGSLKEVTLSPVSESHSEETIPSDSGIGTDNNSTSDQAEKSSESRRRYSFDFCTLDNPEAIPSDTSTKNRHGHRQKHLIVDSFLSHESIKKPKHKRKRKSLQNRDDIQFLTDLEELINKFQVFRISHRNYTFYHENPYPSIFRINFDHYYTVPYVQYDPLLYLRRTSDMKSKKKRGRPAKTNDTMTKVPFLQGFSYAIPSGSYYAPYGMPYTSMPMTNLGYYGQYPAPLYLSHTLGATSSFMRPTLPPPQFHASSHMKISTTAKHKAKHGVRLQTPVGMGLGDMQSSLAPPKVGGTSLLSGRLHKKKHKHKHKHKDEQILGTHDLSGLFASKSTGFSSHTINERLSSSDKDLSLLNDKRKHKEKQKYQHCETGHKGSKSNFEVDTLSTLLLSDAQHWTQSKDKSDSINDPIDSCTKRYSGNTESNGRSESLDMFGEMNSSSEKRDNDASGNKRSFEGFGTYKEKDIQPFGTNRKNRSTYSSASSGIAGPHIKADQTLLHGKMESSACKVMTRRKPAAVDSVTMPTPVFSLLPSSSATSEAASSPLKKQFKGHEIEAIQCEVHKMCNYTKILSTKKNLDHVNKILKAKRLQRQSKTGNNFIKKRRGRPRKEPLSFDEDSKDQMPILEKCIDLPNKRGQRSTLDPLILEPAATQDTIMATIEAVIHMAREMPLPIPPLPPPLPLSPFPPPRTLWKRKSKSS
SIO_010081: LOC116780026
subclass of: SO_0000673
so part of: LOC116780026
location: complement(join(8187003..8187481,8217184..8217351,8300593..8304031,8420091..8420162,8591203..8591694))
location: region:8187003-8591694:-1
so has part: feature:8591203-8591694:-1:exon
so has part: feature:8420091-8420162:-1:exon
so has part: feature:8300593-8304031:-1:exon
so has part: feature:8217184-8217351:-1:exon
so has part: feature:8187003-8187481:-1:exon

XP_032530419.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8591203-8591694:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8420091-8420162:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8300593-8304031:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8217184-8217351:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8187003-8187481:-1:exon

LOC116780076
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780076
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8781860..8782309
location: region:8781860-8782309:1
so has part: feature:8781860-8782309:1:exon
subclass of: SO_0000011

116780076
type: Gene
SIO_000068: ncbigene

position:8781860:1
position: 8781860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8782309:1
position: 8782309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8781860-8782309:1:exon

LOC116780076
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780076
product: uncharacterized LOC116780076
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004354318.1
SIO_010081: LOC116780076
subclass of: SO_0000673
so part of: LOC116780076
location: join(8781860..8781894,8782191..8782309)
location: region:8781860-8782309:1
so has part: feature:8781860-8781894:1:exon
so has part: feature:8782191-8782309:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8781860-8781894:1:exon

position:8781894:1
position: 8781894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8782191-8782309:1:exon

position:8782191:1
position: 8782191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116779988
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779988
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8828245..8839896
location: region:8828245-8839896:1
so has part: feature:8828245-8839896:1:exon
subclass of: SO_0000010

116779988
type: Gene
SIO_000068: ncbigene

position:8828245:1
position: 8828245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8839896:1
position: 8839896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8828245-8839896:1:exon

LOC116779988
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779988
product: arrestin domain-containing protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 23% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674491.1
SIO_010081: LOC116779988
subclass of: SO_0000673
so part of: LOC116779988
location: join(8828245..8828524,8832218..8832299,8835028..8835175,8836411..8836513,8836951..8837207,8837611..8837773,8838589..8838743,8839840..8839896)
location: region:8828245-8839896:1
so has part: feature:8828245-8828524:1:exon
so has part: feature:8832218-8832299:1:exon
so has part: feature:8835028-8835175:1:exon
so has part: feature:8836411-8836513:1:exon
so has part: feature:8836951-8837207:1:exon
so has part: feature:8837611-8837773:1:exon
so has part: feature:8838589-8838743:1:exon
so has part: feature:8839840-8839896:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8828245-8828524:1:exon

position:8828524:1
position: 8828524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8832218-8832299:1:exon

position:8832218:1
position: 8832218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8832299:1
position: 8832299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8835028-8835175:1:exon

position:8835028:1
position: 8835028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8835175:1
position: 8835175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8836411-8836513:1:exon

position:8836411:1
position: 8836411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8836513:1
position: 8836513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8836951-8837207:1:exon

position:8836951:1
position: 8836951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8837207:1
position: 8837207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8837611-8837773:1:exon

position:8837611:1
position: 8837611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8837773:1
position: 8837773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8838589-8838743:1:exon

position:8838589:1
position: 8838589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8838743:1
position: 8838743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8839840-8839896:1:exon

position:8839840:1
position: 8839840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116779988
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779988
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arrestin domain-containing protein 3-like
translation: MVLGKVKSLTISFDCLSDSNIPVYSSGDTVSGRISLEVTGEIRVKSLKIHARGRAKVRWAESRNAGSNTAYTQNYTEEVEYFNHKDVLVGHERDDDNSEEGLHTVHSGRHEYAFSFELPQIPLATSFEGRHGSVRYWVKAELHRPWLLPVKLKKEFTVFEHIDINTPSLLSPQAGTKEKTLCCWLCTSGPISLSAKIERKGYTPGESIQIFAEIENCSSRMVVPKATIYQTQAFYAKGKMKEVKQLVANLRGESLSSGKTETWNGKQLKIPPVSPSILDCSIIRVEYSLMVYVDIPGAMDLFLNLPLVIGTIPLHPFGSRTSSVSSQGSMNMNWLGLTLPQRLEAPPSYAEVVTEENMQSYLAPVAAFDDFQRALQGPLFAYIHEFRFLPPPLYSEIDPNSDQPTDEIPSCPSC
SIO_010081: LOC116779988
subclass of: SO_0000673
so part of: LOC116779988
location: join(8828245..8828524,8832218..8832299,8835028..8835175,8836411..8836513,8836951..8837207,8837611..8837773,8838589..8838743,8839840..8839896)
location: region:8828245-8839896:1
so has part: feature:8828245-8828524:1:exon
so has part: feature:8832218-8832299:1:exon
so has part: feature:8835028-8835175:1:exon
so has part: feature:8836411-8836513:1:exon
so has part: feature:8836951-8837207:1:exon
so has part: feature:8837611-8837773:1:exon
so has part: feature:8838589-8838743:1:exon
so has part: feature:8839840-8839896:1:exon

XP_032530382.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8828245-8828524:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8832218-8832299:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8835028-8835175:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8836411-8836513:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8836951-8837207:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8837611-8837773:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8838589-8838743:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8839840-8839896:1:exon

LOC116780039
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780039
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9037992..9245870
location: region:9037992-9245870:1
so has part: feature:9037992-9245870:1:exon
subclass of: SO_0000010

116780039
type: Gene
SIO_000068: ncbigene

position:9037992:1
position: 9037992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9245870:1
position: 9245870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9037992-9245870:1:exon

LOC116780039
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116780039
product: guanine nucleotide-binding protein G(q) subunit alpha
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 11% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674548.1
SIO_010081: LOC116780039
subclass of: SO_0000673
so part of: LOC116780039
location: join(9037992..9038127,9086285..9086469,9147863..9148017,9219514..9219642,9220616..9220745,9239528..9239681,9245680..9245870)
location: region:9037992-9245870:1
so has part: feature:9037992-9038127:1:exon
so has part: feature:9086285-9086469:1:exon
so has part: feature:9147863-9148017:1:exon
so has part: feature:9219514-9219642:1:exon
so has part: feature:9220616-9220745:1:exon
so has part: feature:9239528-9239681:1:exon
so has part: feature:9245680-9245870:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9037992-9038127:1:exon

position:9038127:1
position: 9038127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9086285-9086469:1:exon

position:9086285:1
position: 9086285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9086469:1
position: 9086469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9147863-9148017:1:exon

position:9147863:1
position: 9147863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9148017:1
position: 9148017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9219514-9219642:1:exon

position:9219514:1
position: 9219514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9219642:1
position: 9219642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9220616-9220745:1:exon

position:9220616:1
position: 9220616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9220745:1
position: 9220745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9239528-9239681:1:exon

position:9239528:1
position: 9239528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9239681:1
position: 9239681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9245680-9245870:1:exon

position:9245680:1
position: 9245680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116780039
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116780039
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein G(q) subunit alpha
translation: MTLESIMACCLSEEAKEARRINDEIERQLRRDKRDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKARAQLVREVDVEKVSTFENPYVDALRSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRIADSAYLPTQQDVLRVRVPTTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQLNLKEYNLV
SIO_010081: LOC116780039
subclass of: SO_0000673
so part of: LOC116780039
location: join(9037992..9038127,9086285..9086469,9147863..9148017,9219514..9219642,9220616..9220745,9239528..9239681,9245680..9245870)
location: region:9037992-9245870:1
so has part: feature:9037992-9038127:1:exon
so has part: feature:9086285-9086469:1:exon
so has part: feature:9147863-9148017:1:exon
so has part: feature:9219514-9219642:1:exon
so has part: feature:9220616-9220745:1:exon
so has part: feature:9239528-9239681:1:exon
so has part: feature:9245680-9245870:1:exon

XP_032530439.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9037992-9038127:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9086285-9086469:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9147863-9148017:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9219514-9219642:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9220616-9220745:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9239528-9239681:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9245680-9245870:1:exon

LOC116780064
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780064
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9116991..9127582
location: region:9116991-9127582:1
so has part: feature:9116991-9127582:1:exon
subclass of: SO_0000011

116780064
type: Gene
SIO_000068: ncbigene

position:9116991:1
position: 9116991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9127582:1
position: 9127582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9116991-9127582:1:exon

LOC116780064
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780064
product: uncharacterized LOC116780064
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004354307.1
SIO_010081: LOC116780064
subclass of: SO_0000673
so part of: LOC116780064
location: join(9116991..9117117,9120881..9120885,9127572..9127582)
location: region:9116991-9127582:1
so has part: feature:9116991-9117117:1:exon
so has part: feature:9120881-9120885:1:exon
so has part: feature:9127572-9127582:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9116991-9117117:1:exon

position:9117117:1
position: 9117117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9120881-9120885:1:exon

position:9120881:1
position: 9120881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9120885:1
position: 9120885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9127572-9127582:1:exon

position:9127572:1
position: 9127572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116779959
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779959
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(9198177..9203705)
location: region:9198177-9203705:-1
so has part: feature:9198177-9203705:-1:exon

116779959
type: Gene
SIO_000068: ncbigene

position:9198177:-1
position: 9198177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9203705:-1
position: 9203705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9198177-9203705:-1:exon

LOC116779959
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779959
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC116779959
subclass of: SO_0000673
so part of: LOC116779959
location: complement(9198177..9198922)
location: region:9198177-9198922:-1
so has part: feature:9198177-9198922:-1:exon

position:9198922:-1
position: 9198922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9198177-9198922:-1:exon

LOC116779959
type: Exon
subclass of: SO_0000147
RO_0002162: 296741
gene: LOC116779959
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC116779959
subclass of: SO_0000673
so part of: LOC116779959
location: complement(9203563..9203705)
location: region:9203563-9203705:-1
so has part: feature:9203563-9203705:-1:exon

position:9203563:-1
position: 9203563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9203563-9203705:-1:exon

LOC116780060
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780060
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9287549..9301131)
location: region:9287549-9301131:-1
so has part: feature:9287549-9301131:-1:exon
subclass of: SO_0000011

116780060
type: Gene
SIO_000068: ncbigene

position:9287549:-1
position: 9287549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9301131:-1
position: 9301131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9287549-9301131:-1:exon

LOC116780060
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780060
product: uncharacterized LOC116780060
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004354303.1
SIO_010081: LOC116780060
subclass of: SO_0000673
so part of: LOC116780060
location: complement(join(9287549..9287776,9293667..9293671,9297925..9297928,9301121..9301131))
location: region:9287549-9301131:-1
so has part: feature:9301121-9301131:-1:exon
so has part: feature:9297925-9297928:-1:exon
so has part: feature:9293667-9293671:-1:exon
so has part: feature:9287549-9287776:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9301121-9301131:-1:exon

position:9301121:-1
position: 9301121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9297925-9297928:-1:exon

position:9297925:-1
position: 9297925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9297928:-1
position: 9297928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9293667-9293671:-1:exon

position:9293667:-1
position: 9293667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9293671:-1
position: 9293671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9287549-9287776:-1:exon

position:9287776:-1
position: 9287776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116780071
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780071
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9413625..9498550)
location: region:9413625-9498550:-1
so has part: feature:9413625-9498550:-1:exon
subclass of: SO_0000011

116780071
type: Gene
SIO_000068: ncbigene

position:9413625:-1
position: 9413625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9498550:-1
position: 9498550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9413625-9498550:-1:exon

LOC116780071
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780071
product: uncharacterized LOC116780071
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004354314.1
SIO_010081: LOC116780071
subclass of: SO_0000673
so part of: LOC116780071
location: complement(join(9413625..9413748,9475133..9475137,9498500..9498550))
location: region:9413625-9498550:-1
so has part: feature:9498500-9498550:-1:exon
so has part: feature:9475133-9475137:-1:exon
so has part: feature:9413625-9413748:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9498500-9498550:-1:exon

position:9498500:-1
position: 9498500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9475133-9475137:-1:exon

position:9475133:-1
position: 9475133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9475137:-1
position: 9475137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9413625-9413748:-1:exon

position:9413748:-1
position: 9413748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116780043
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780043
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9542232..9573232
location: region:9542232-9573232:1
so has part: feature:9542232-9573232:1:exon
subclass of: SO_0000010

116780043
type: Gene
SIO_000068: ncbigene

position:9542232:1
position: 9542232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9573232:1
position: 9573232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9542232-9573232:1:exon

LOC116780043
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116780043
product: spindlin-Z-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 21 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674551.1
SIO_010081: LOC116780043
subclass of: SO_0000673
so part of: LOC116780043
location: join(9542232..9542343,9557816..9557864,9569681..9569934,9570908..9571141,9573033..9573232)
location: region:9542232-9573232:1
so has part: feature:9542232-9542343:1:exon
so has part: feature:9557816-9557864:1:exon
so has part: feature:9569681-9569934:1:exon
so has part: feature:9570908-9571141:1:exon
so has part: feature:9573033-9573232:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9542232-9542343:1:exon

position:9542343:1
position: 9542343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9557816-9557864:1:exon

position:9557816:1
position: 9557816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9557864:1
position: 9557864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9569681-9569934:1:exon

position:9569681:1
position: 9569681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9569934:1
position: 9569934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9570908-9571141:1:exon

position:9570908:1
position: 9570908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9571141:1
position: 9571141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9573033-9573232:1:exon

position:9573033:1
position: 9573033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116780043
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116780043
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spindlin-Z-like
translation: MKTPFGKSPGQRSRADAGHAGVSASMMKKRTSHKKHRNNVGPSKPISQPRRNIVGCRIQHGWREGSGPVTQWKGTVLDQVPVNPSLYLIKYDGFDCVYGLELHKDERVSALEVLPDRVASSRISDAHLADTMIGKAVEHMFETEDGSKDEWRGMILARAPIMNTWFYITYEKDPVLYMYQLLDDYKEGDLRIMPDSNDSPPAEREPGEVVDSLVGKQVEYAKEDGSKRTGMVIHQVEAKPSVYFIKFDDDFHIYVYDLVKTS
SIO_010081: LOC116780043
subclass of: SO_0000673
so part of: LOC116780043
location: join(9542292..9542343,9557816..9557864,9569681..9569934,9570908..9571141,9573033..9573232)
location: region:9542292-9573232:1
so has part: feature:9542292-9542343:1:exon
so has part: feature:9557816-9557864:1:exon
so has part: feature:9569681-9569934:1:exon
so has part: feature:9570908-9571141:1:exon
so has part: feature:9573033-9573232:1:exon

XP_032530442.1
type: Protein
SIO_000068: ncbiprotein

position:9542292:1
position: 9542292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9542292-9542343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9557816-9557864:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9569681-9569934:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9570908-9571141:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9573033-9573232:1:exon

LOC116780069
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780069
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9671390..9677266)
location: region:9671390-9677266:-1
so has part: feature:9671390-9677266:-1:exon
subclass of: SO_0000011

116780069
type: Gene
SIO_000068: ncbigene

position:9671390:-1
position: 9671390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9677266:-1
position: 9677266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9671390-9677266:-1:exon

LOC116780069
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780069
product: uncharacterized LOC116780069
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004354312.1
SIO_010081: LOC116780069
subclass of: SO_0000673
so part of: LOC116780069
location: complement(join(9671390..9671859,9672551..9672556,9677256..9677266))
location: region:9671390-9677266:-1
so has part: feature:9677256-9677266:-1:exon
so has part: feature:9672551-9672556:-1:exon
so has part: feature:9671390-9671859:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9677256-9677266:-1:exon

position:9677256:-1
position: 9677256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9672551-9672556:-1:exon

position:9672551:-1
position: 9672551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9672556:-1
position: 9672556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9671390-9671859:-1:exon

position:9671859:-1
position: 9671859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116780045
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780045
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9691935..9962428)
location: region:9691935-9962428:-1
so has part: feature:9691935-9962428:-1:exon
subclass of: SO_0000010

116780045
type: Gene
SIO_000068: ncbigene

position:9691935:-1
position: 9691935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9962428:-1
position: 9962428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9691935-9962428:-1:exon

LOC116780045
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116780045
product: E3 ubiquitin-protein ligase RNF38-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins
transcript id: XM_032674553.1
SIO_010081: LOC116780045
subclass of: SO_0000673
so part of: LOC116780045
location: complement(join(9691935..9691997,9700449..9700548,9701629..9701750,9703321..9703405,9705404..9705510,9711489..9711650,9716630..9716800,9816348..9816515,9848076..9848289,9915382..9915575,9962375..9962428))
location: region:9691935-9962428:-1
so has part: feature:9962375-9962428:-1:exon
so has part: feature:9915382-9915575:-1:exon
so has part: feature:9848076-9848289:-1:exon
so has part: feature:9816348-9816515:-1:exon
so has part: feature:9716630-9716800:-1:exon
so has part: feature:9711489-9711650:-1:exon
so has part: feature:9705404-9705510:-1:exon
so has part: feature:9703321-9703405:-1:exon
so has part: feature:9701629-9701750:-1:exon
so has part: feature:9700449-9700548:-1:exon
so has part: feature:9691935-9691997:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9962375-9962428:-1:exon

position:9962375:-1
position: 9962375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9915382-9915575:-1:exon

position:9915382:-1
position: 9915382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9915575:-1
position: 9915575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9848076-9848289:-1:exon

position:9848076:-1
position: 9848076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9848289:-1
position: 9848289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9816348-9816515:-1:exon

position:9816348:-1
position: 9816348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9816515:-1
position: 9816515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9716630-9716800:-1:exon

position:9716630:-1
position: 9716630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9716800:-1
position: 9716800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9711489-9711650:-1:exon

position:9711489:-1
position: 9711489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9711650:-1
position: 9711650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9705404-9705510:-1:exon

position:9705404:-1
position: 9705404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9705510:-1
position: 9705510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9703321-9703405:-1:exon

position:9703321:-1
position: 9703321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9703405:-1
position: 9703405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9701629-9701750:-1:exon

position:9701629:-1
position: 9701629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9701750:-1
position: 9701750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9700449-9700548:-1:exon

position:9700449:-1
position: 9700449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9700548:-1
position: 9700548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9691935-9691997:-1:exon

position:9691997:-1
position: 9691997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116780045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116780045
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF38-like
translation: MASSTTSPTMQPWEMPSNRHRPLARSNQHHFSGERCSTPTRSRRSPLVRHQRARRDRLSRHNSVSQDENYHHLSYEQQQAIEEPQAFNPPNISHHIFHPTGHSPQQNTVVVDIHDQIHQSAVPVSYTVTTVAPHGIPLCTTQHIPPCSTQQVPGCSVVFSGQHLPICSVPPPMLQACSVQHLPVPYATFPPLISNDPFLLHPPHLSPHHPSHLPRPGQFVPFQAQQSRSPLQRIENEVELLGEHLPIGSFTYSPSTHPPTLTSSASIQLLTHDPLHQEVSFGIPYPPFMPRRLTGHSRYLSQQPIPPHAYHPSLLPYVLSVLPASPAVGPAFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKTDIEQLPSYRFNPSNRQSEQTLCVVCMCDFEARQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE
SIO_010081: LOC116780045
subclass of: SO_0000673
so part of: LOC116780045
location: complement(join(9691935..9691997,9700449..9700548,9701629..9701750,9703321..9703405,9705404..9705510,9711489..9711650,9716630..9716800,9816348..9816515,9848076..9848289,9915382..9915515))
location: region:9691935-9915515:-1
so has part: feature:9915382-9915515:-1:exon
so has part: feature:9848076-9848289:-1:exon
so has part: feature:9816348-9816515:-1:exon
so has part: feature:9716630-9716800:-1:exon
so has part: feature:9711489-9711650:-1:exon
so has part: feature:9705404-9705510:-1:exon
so has part: feature:9703321-9703405:-1:exon
so has part: feature:9701629-9701750:-1:exon
so has part: feature:9700449-9700548:-1:exon
so has part: feature:9691935-9691997:-1:exon

XP_032530444.1
type: Protein
SIO_000068: ncbiprotein

position:9915515:-1
position: 9915515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9915382-9915515:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9848076-9848289:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9816348-9816515:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9716630-9716800:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9711489-9711650:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9705404-9705510:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9703321-9703405:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9701629-9701750:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9700449-9700548:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9691935-9691997:-1:exon

LOC116780051
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780051
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9721588..9728485
location: region:9721588-9728485:1
so has part: feature:9721588-9728485:1:exon
subclass of: SO_0000011

116780051
type: Gene
SIO_000068: ncbigene

position:9721588:1
position: 9721588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9728485:1
position: 9728485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9721588-9728485:1:exon

LOC116780051
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780051
product: uncharacterized LOC116780051
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004354294.1
SIO_010081: LOC116780051
subclass of: SO_0000673
so part of: LOC116780051
location: join(9721588..9721843,9728065..9728485)
location: region:9721588-9728485:1
so has part: feature:9721588-9721843:1:exon
so has part: feature:9728065-9728485:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9721588-9721843:1:exon

position:9721843:1
position: 9721843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9728065-9728485:1:exon

position:9728065:1
position: 9728065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRNAE-UUC
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: TRNAE-UUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(9847112..9847183)
location: region:9847112-9847183:-1
so has part: feature:9847112-9847183:-1:exon
subclass of: SO_0000663

116780102
type: Gene
SIO_000068: ncbigene

position:9847112:-1
position: 9847112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9847183:-1
position: 9847183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9847112-9847183:-1:exon

TRNAE-UUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 296741
gene: TRNAE-UUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon UUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(9847148..9847150),aa:Glu, seq:ttc)
SIO_010081: TRNAE-UUC
subclass of: SO_0000673
so part of: TRNAE-UUC
location: complement(9847112..9847183)
location: region:9847112-9847183:-1
so has part: feature:9847112-9847183:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9847112-9847183:-1:exon

LOC116780053
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780053
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10238748..10242136
location: region:10238748-10242136:1
so has part: feature:10238748-10242136:1:exon
subclass of: SO_0000011

116780053
type: Gene
SIO_000068: ncbigene

position:10238748:1
position: 10238748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10242136:1
position: 10242136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10238748-10242136:1:exon

LOC116780053
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780053
product: uncharacterized LOC116780053
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004354296.1
SIO_010081: LOC116780053
subclass of: SO_0000673
so part of: LOC116780053
location: join(10238748..10239245,10240166..10240287,10241867..10242136)
location: region:10238748-10242136:1
so has part: feature:10238748-10239245:1:exon
so has part: feature:10240166-10240287:1:exon
so has part: feature:10241867-10242136:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10238748-10239245:1:exon

position:10239245:1
position: 10239245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10240166-10240287:1:exon

position:10240166:1
position: 10240166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10240287:1
position: 10240287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10241867-10242136:1:exon

position:10241867:1
position: 10241867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116780031
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780031
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10278806..10314401)
location: region:10278806-10314401:-1
so has part: feature:10278806-10314401:-1:exon
subclass of: SO_0000010

116780031
type: Gene
SIO_000068: ncbigene

position:10278806:-1
position: 10278806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10314401:-1
position: 10314401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10278806-10314401:-1:exon

LOC116780031
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116780031
product: ubiquilin-1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 39% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674535.1
SIO_010081: LOC116780031
subclass of: SO_0000673
so part of: LOC116780031
location: complement(join(10278806..10278958,10280682..10280850,10282049..10282164,10285500..10285642,10286150..10286390,10287029..10287187,10287982..10288244,10289369..10289484,10306380..10306531,10314243..10314401))
location: region:10278806-10314401:-1
so has part: feature:10314243-10314401:-1:exon
so has part: feature:10306380-10306531:-1:exon
so has part: feature:10289369-10289484:-1:exon
so has part: feature:10287982-10288244:-1:exon
so has part: feature:10287029-10287187:-1:exon
so has part: feature:10286150-10286390:-1:exon
so has part: feature:10285500-10285642:-1:exon
so has part: feature:10282049-10282164:-1:exon
so has part: feature:10280682-10280850:-1:exon
so has part: feature:10278806-10278958:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10314243-10314401:-1:exon

position:10314243:-1
position: 10314243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10306380-10306531:-1:exon

position:10306380:-1
position: 10306380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10306531:-1
position: 10306531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10289369-10289484:-1:exon

position:10289369:-1
position: 10289369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10289484:-1
position: 10289484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10287982-10288244:-1:exon

position:10287982:-1
position: 10287982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10288244:-1
position: 10288244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10287029-10287187:-1:exon

position:10287029:-1
position: 10287029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10287187:-1
position: 10287187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10286150-10286390:-1:exon

position:10286150:-1
position: 10286150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10286390:-1
position: 10286390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10285500-10285642:-1:exon

position:10285500:-1
position: 10285500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10285642:-1
position: 10285642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10282049-10282164:-1:exon

position:10282049:-1
position: 10282049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10282164:-1
position: 10282164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:10280682-10280850:-1:exon

position:10280682:-1
position: 10280682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10280850:-1
position: 10280850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:10278806-10278958:-1:exon

position:10278958:-1
position: 10278958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116780031
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116780031
product: ubiquilin-1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674534.1
SIO_010081: LOC116780031
subclass of: SO_0000673
so part of: LOC116780031
location: complement(join(10278806..10278958,10280682..10280850,10282049..10282164,10284332..10284415,10285500..10285642,10286150..10286390,10287029..10287187,10287982..10288244,10289369..10289484,10306380..10306531,10314243..10314401))
location: region:10278806-10314401:-1
so has part: feature:10314243-10314401:-1:exon
so has part: feature:10306380-10306531:-1:exon
so has part: feature:10289369-10289484:-1:exon
so has part: feature:10287982-10288244:-1:exon
so has part: feature:10287029-10287187:-1:exon
so has part: feature:10286150-10286390:-1:exon
so has part: feature:10285500-10285642:-1:exon
so has part: feature:10284332-10284415:-1:exon
so has part: feature:10282049-10282164:-1:exon
so has part: feature:10280682-10280850:-1:exon
so has part: feature:10278806-10278958:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10314243-10314401:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10306380-10306531:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10289369-10289484:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10287982-10288244:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10287029-10287187:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10286150-10286390:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10285500-10285642:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10284332-10284415:-1:exon

position:10284332:-1
position: 10284332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10284415:-1
position: 10284415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:10282049-10282164:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10280682-10280850:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10278806-10278958:-1:exon

LOC116780031
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116780031
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquilin-1-like isoform X2
translation: MSESAESSAETHSSSESSAQSFAAAEPRIIKITVKTPKEKEEFAVPETSSIQQFKEEISKHFKSHTDQLVLIFAGKILKDQDTLIQHGIHDGLTVHLVIKMQNRSQDHPDQQTHTTGSIATTSISSSNTSTPTSTNINSFALGDLGGLTGLSSLGLNASNFSELQSQMQRQLMSNPEMMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLVQRNPEIGHMLNNPDIMRQTLELARNPAMMQEMMRNQDRALSNLESIPGGYNALQRMYTDIQEPMLNAAQEQFGGNPFASLVNNASSGGDSQPSRTENRDPLPNPWAPQSSSQNSTSTSTSGENSGSSNVGNSTSASMGQSATIPNLGSGLGVGMFNTPGMQSLFQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAIQMQNPDTLSAMSNPRAMQALLQIQQGLQTLATEAPGLIPGFNPGLGELGSTGAPTGSTVPSSIPSENTSPTSGATDPGHQQFVQQMLQALAGANAQLQNPEVRFQQQLEQLSAMGFLNHEANLQALIATGGDISAAIERLLGAQLS
SIO_010081: LOC116780031
subclass of: SO_0000673
so part of: LOC116780031
location: complement(join(10278806..10278958,10280682..10280850,10282049..10282164,10285500..10285642,10286150..10286390,10287029..10287187,10287982..10288244,10289369..10289484,10306380..10306531,10314243..10314401))
location: region:10278806-10314401:-1
so has part: feature:10314243-10314401:-1:exon
so has part: feature:10306380-10306531:-1:exon
so has part: feature:10289369-10289484:-1:exon
so has part: feature:10287982-10288244:-1:exon
so has part: feature:10287029-10287187:-1:exon
so has part: feature:10286150-10286390:-1:exon
so has part: feature:10285500-10285642:-1:exon
so has part: feature:10282049-10282164:-1:exon
so has part: feature:10280682-10280850:-1:exon
so has part: feature:10278806-10278958:-1:exon

XP_032530426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10314243-10314401:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10306380-10306531:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10289369-10289484:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10287982-10288244:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10287029-10287187:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10286150-10286390:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10285500-10285642:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10282049-10282164:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10280682-10280850:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10278806-10278958:-1:exon

LOC116780031
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116780031
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquilin-1-like isoform X1
translation: MSESAESSAETHSSSESSAQSFAAAEPRIIKITVKTPKEKEEFAVPETSSIQQFKEEISKHFKSHTDQLVLIFAGKILKDQDTLIQHGIHDGLTVHLVIKMQNRSQDHPDQQTHTTGSIATTSISSSNTSTPTSTNINSFALGDLGGLTGLSSLGLNASNFSELQSQMQRQLMSNPEMMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLVQRNPEIGHMLNNPDIMRQTLELARNPAMMQEMMRNQDRALSNLESIPGGYNALQRMYTDIQEPMLNAAQEQFGGNPFASLVNNASSGGDSQPSRTENRDPLPNPWAPQSSSQNSTSTSTSGENSGSSNVGNSTSASMGQSATIPNLGSGLGVGMFNTPGMQSLFQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAIQMMLNNPLFAGNSQLQEQMRRQLPTFFQRMQNPDTLSAMSNPRAMQALLQIQQGLQTLATEAPGLIPGFNPGLGELGSTGAPTGSTVPSSIPSENTSPTSGATDPGHQQFVQQMLQALAGANAQLQNPEVRFQQQLEQLSAMGFLNHEANLQALIATGGDISAAIERLLGAQLS
SIO_010081: LOC116780031
subclass of: SO_0000673
so part of: LOC116780031
location: complement(join(10278806..10278958,10280682..10280850,10282049..10282164,10284332..10284415,10285500..10285642,10286150..10286390,10287029..10287187,10287982..10288244,10289369..10289484,10306380..10306531,10314243..10314401))
location: region:10278806-10314401:-1
so has part: feature:10314243-10314401:-1:exon
so has part: feature:10306380-10306531:-1:exon
so has part: feature:10289369-10289484:-1:exon
so has part: feature:10287982-10288244:-1:exon
so has part: feature:10287029-10287187:-1:exon
so has part: feature:10286150-10286390:-1:exon
so has part: feature:10285500-10285642:-1:exon
so has part: feature:10284332-10284415:-1:exon
so has part: feature:10282049-10282164:-1:exon
so has part: feature:10280682-10280850:-1:exon
so has part: feature:10278806-10278958:-1:exon

XP_032530425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10314243-10314401:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10306380-10306531:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10289369-10289484:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10287982-10288244:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10287029-10287187:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10286150-10286390:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10285500-10285642:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10284332-10284415:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10282049-10282164:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10280682-10280850:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10278806-10278958:-1:exon

LOC116780016
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780016
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10353883..10371646)
location: region:10353883-10371646:-1
so has part: feature:10353883-10371646:-1:exon
subclass of: SO_0000010

116780016
type: Gene
SIO_000068: ncbigene

position:10353883:-1
position: 10353883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10371646:-1
position: 10371646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10353883-10371646:-1:exon

LOC116780016
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116780016
product: heterogeneous nuclear ribonucleoprotein K-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 72% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674520.1
SIO_010081: LOC116780016
subclass of: SO_0000673
so part of: LOC116780016
location: complement(join(10353883..10353916,10354694..10354863,10355308..10355375,10355465..10355480,10363462..10363516,10363852..10364159,10364636..10364764,10365812..10365925,10366516..10366588,10367522..10367565,10369004..10369060,10370658..10370755,10371598..10371646))
location: region:10353883-10371646:-1
so has part: feature:10371598-10371646:-1:exon
so has part: feature:10370658-10370755:-1:exon
so has part: feature:10369004-10369060:-1:exon
so has part: feature:10367522-10367565:-1:exon
so has part: feature:10366516-10366588:-1:exon
so has part: feature:10365812-10365925:-1:exon
so has part: feature:10364636-10364764:-1:exon
so has part: feature:10363852-10364159:-1:exon
so has part: feature:10363462-10363516:-1:exon
so has part: feature:10355465-10355480:-1:exon
so has part: feature:10355308-10355375:-1:exon
so has part: feature:10354694-10354863:-1:exon
so has part: feature:10353883-10353916:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10371598-10371646:-1:exon

position:10371598:-1
position: 10371598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10370658-10370755:-1:exon

position:10370658:-1
position: 10370658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10370755:-1
position: 10370755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10369004-10369060:-1:exon

position:10369004:-1
position: 10369004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10369060:-1
position: 10369060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10367522-10367565:-1:exon

position:10367522:-1
position: 10367522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10367565:-1
position: 10367565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10366516-10366588:-1:exon

position:10366516:-1
position: 10366516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10366588:-1
position: 10366588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10365812-10365925:-1:exon

position:10365812:-1
position: 10365812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10365925:-1
position: 10365925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10364636-10364764:-1:exon

position:10364636:-1
position: 10364636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10364764:-1
position: 10364764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10363852-10364159:-1:exon

position:10363852:-1
position: 10363852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10364159:-1
position: 10364159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:10363462-10363516:-1:exon

position:10363462:-1
position: 10363462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10363516:-1
position: 10363516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:10355465-10355480:-1:exon

position:10355465:-1
position: 10355465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10355480:-1
position: 10355480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:10355308-10355375:-1:exon

position:10355308:-1
position: 10355308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10355375:-1
position: 10355375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:10354694-10354863:-1:exon

position:10354694:-1
position: 10354694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10354863:-1
position: 10354863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:10353883-10353916:-1:exon

position:10353916:-1
position: 10353916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116780016
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116780016
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoprotein K-like
translation: METEQQEETFTNTETNGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADTETIGEILKKIIPTLEEYQHYKGNDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDETYDYGGFTMMFDDRRGRPVGFPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRGGDLMSYDRRGRPGDRYDGMGGSGYGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQYADVEGF
SIO_010081: LOC116780016
subclass of: SO_0000673
so part of: LOC116780016
location: complement(join(10353883..10353916,10354694..10354863,10355308..10355375,10355465..10355480,10363462..10363516,10363852..10364159,10364636..10364764,10365812..10365925,10366516..10366588,10367522..10367565,10369004..10369060,10370658..10370755,10371598..10371646))
location: region:10353883-10371646:-1
so has part: feature:10371598-10371646:-1:exon
so has part: feature:10370658-10370755:-1:exon
so has part: feature:10369004-10369060:-1:exon
so has part: feature:10367522-10367565:-1:exon
so has part: feature:10366516-10366588:-1:exon
so has part: feature:10365812-10365925:-1:exon
so has part: feature:10364636-10364764:-1:exon
so has part: feature:10363852-10364159:-1:exon
so has part: feature:10363462-10363516:-1:exon
so has part: feature:10355465-10355480:-1:exon
so has part: feature:10355308-10355375:-1:exon
so has part: feature:10354694-10354863:-1:exon
so has part: feature:10353883-10353916:-1:exon

XP_032530411.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10371598-10371646:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10370658-10370755:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10369004-10369060:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10367522-10367565:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10366516-10366588:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10365812-10365925:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10364636-10364764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10363852-10364159:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10363462-10363516:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10355465-10355480:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10355308-10355375:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10354694-10354863:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10353883-10353916:-1:exon

LOC116780050
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780050
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10415700..10438549)
location: region:10415700-10438549:-1
so has part: feature:10415700-10438549:-1:exon
subclass of: SO_0000011

116780050
type: Gene
SIO_000068: ncbigene

position:10415700:-1
position: 10415700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10438549:-1
position: 10438549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10415700-10438549:-1:exon

LOC116780050
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780050
product: uncharacterized LOC116780050
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_004354293.1
SIO_010081: LOC116780050
subclass of: SO_0000673
so part of: LOC116780050
location: complement(join(10415700..10415815,10426236..10426245,10438539..10438549))
location: region:10415700-10438549:-1
so has part: feature:10438539-10438549:-1:exon
so has part: feature:10426236-10426245:-1:exon
so has part: feature:10415700-10415815:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10438539-10438549:-1:exon

position:10438539:-1
position: 10438539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10426236-10426245:-1:exon

position:10426236:-1
position: 10426236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10426245:-1
position: 10426245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10415700-10415815:-1:exon

position:10415815:-1
position: 10415815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116780066
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780066
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10433282..10435619
location: region:10433282-10435619:1
so has part: feature:10433282-10435619:1:exon
subclass of: SO_0000011

116780066
type: Gene
SIO_000068: ncbigene

position:10433282:1
position: 10433282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10435619:1
position: 10435619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10433282-10435619:1:exon

LOC116780066
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780066
product: uncharacterized LOC116780066
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004354309.1
SIO_010081: LOC116780066
subclass of: SO_0000673
so part of: LOC116780066
location: join(10433282..10433493,10433613..10433616,10435607..10435619)
location: region:10433282-10435619:1
so has part: feature:10433282-10433493:1:exon
so has part: feature:10433613-10433616:1:exon
so has part: feature:10435607-10435619:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10433282-10433493:1:exon

position:10433493:1
position: 10433493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10433613-10433616:1:exon

position:10433613:1
position: 10433613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10433616:1
position: 10433616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10435607-10435619:1:exon

position:10435607:1
position: 10435607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116780055
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780055
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10715962..10722864)
location: region:10715962-10722864:-1
so has part: feature:10715962-10722864:-1:exon
subclass of: SO_0000011

116780055
type: Gene
SIO_000068: ncbigene

position:10715962:-1
position: 10715962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10722864:-1
position: 10722864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10715962-10722864:-1:exon

LOC116780055
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780055
product: uncharacterized LOC116780055
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004354298.1
SIO_010081: LOC116780055
subclass of: SO_0000673
so part of: LOC116780055
location: complement(join(10715962..10715972,10720517..10720519,10722386..10722864))
location: region:10715962-10722864:-1
so has part: feature:10722386-10722864:-1:exon
so has part: feature:10720517-10720519:-1:exon
so has part: feature:10715962-10715972:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10722386-10722864:-1:exon

position:10722386:-1
position: 10722386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10720517-10720519:-1:exon

position:10720517:-1
position: 10720517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10720519:-1
position: 10720519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10715962-10715972:-1:exon

position:10715972:-1
position: 10715972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116780032
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780032
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10890199..10920338)
location: region:10890199-10920338:-1
so has part: feature:10890199-10920338:-1:exon
subclass of: SO_0000010

116780032
type: Gene
SIO_000068: ncbigene

position:10890199:-1
position: 10890199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10920338:-1
position: 10920338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10890199-10920338:-1:exon

LOC116780032
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116780032
product: ubiquitin-associated protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 6% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674536.1
SIO_010081: LOC116780032
subclass of: SO_0000673
so part of: LOC116780032
location: complement(join(10890199..10890339,10892846..10892947,10894396..10894593,10906489..10907412,10911033..10911157,10920305..10920338))
location: region:10890199-10920338:-1
so has part: feature:10920305-10920338:-1:exon
so has part: feature:10911033-10911157:-1:exon
so has part: feature:10906489-10907412:-1:exon
so has part: feature:10894396-10894593:-1:exon
so has part: feature:10892846-10892947:-1:exon
so has part: feature:10890199-10890339:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10920305-10920338:-1:exon

position:10920305:-1
position: 10920305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10911033-10911157:-1:exon

position:10911033:-1
position: 10911033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10911157:-1
position: 10911157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10906489-10907412:-1:exon

position:10906489:-1
position: 10906489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10907412:-1
position: 10907412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10894396-10894593:-1:exon

position:10894396:-1
position: 10894396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10894593:-1
position: 10894593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10892846-10892947:-1:exon

position:10892846:-1
position: 10892846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10892947:-1
position: 10892947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10890199-10890339:-1:exon

position:10890339:-1
position: 10890339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116780032
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116780032
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-associated protein 1-like
translation: MASKKLGSESHGPFSYLDDVPFKIGDKFKTPAEVGLPIDFNLPDSSKLVREAQYDFSLEKKTIKWAEDIKKIEAAQREAEHKVEEVLANSKTAPEDITKLAFPEGPCPKVMPPPINPILASLQHNNILTPTPANSSAVKQKVLSPPHSKADFNPADFECEEDPFDKLELKTINDKEELKNILEIHVGTTGPIVAQLLDNTLPKGESVLQDEKVLTSIERTTLDFKPLHKPNGFITLPQLGNCEKMSLSTKVSLSPITSVSNIKSLSFPKLDSDESDQKSSKLMSTFHNTTCLCNGALLSSLQTCTQNEANELNGHHLVGLSAVNEDSGMETSTLSSSSRLPSLTASTVCTEEESSQSTATMVMHQNFLVSKVPNNTSCTKRSGGPTPELQQALSASERQCIETVVNMGYAPEDVMKAMKKKGQNIDQVLDYLFVHGQFCEKGFDPLLVEAALEMHQRSEEKITELLQLMSQFKEMGFELKDIKEVLLLHNNDQQNALEDLMARAGAS
SIO_010081: LOC116780032
subclass of: SO_0000673
so part of: LOC116780032
location: complement(join(10890199..10890339,10892846..10892947,10894396..10894593,10906489..10907412,10911033..10911157,10920305..10920338))
location: region:10890199-10920338:-1
so has part: feature:10920305-10920338:-1:exon
so has part: feature:10911033-10911157:-1:exon
so has part: feature:10906489-10907412:-1:exon
so has part: feature:10894396-10894593:-1:exon
so has part: feature:10892846-10892947:-1:exon
so has part: feature:10890199-10890339:-1:exon

XP_032530427.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10920305-10920338:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10911033-10911157:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10906489-10907412:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10894396-10894593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10892846-10892947:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10890199-10890339:-1:exon

LOC116780035
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780035
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10958318..10979688
location: region:10958318-10979688:1
so has part: feature:10958318-10979688:1:exon
subclass of: SO_0000010

116780035
type: Gene
SIO_000068: ncbigene

position:10958318:1
position: 10958318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10979688:1
position: 10979688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10958318-10979688:1:exon

LOC116780035
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116780035
product: DDB1- and CUL4-associated factor 12-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674541.1
SIO_010081: LOC116780035
subclass of: SO_0000673
so part of: LOC116780035
location: join(10958318..10958336,10959293..10959321,10959703..10959957,10966493..10966699,10967933..10967993,10969676..10969869,10970043..10970108,10973211..10973373,10978551..10978735,10979501..10979688)
location: region:10958318-10979688:1
so has part: feature:10958318-10958336:1:exon
so has part: feature:10959293-10959321:1:exon
so has part: feature:10959703-10959957:1:exon
so has part: feature:10966493-10966699:1:exon
so has part: feature:10967933-10967993:1:exon
so has part: feature:10969676-10969869:1:exon
so has part: feature:10970043-10970108:1:exon
so has part: feature:10973211-10973373:1:exon
so has part: feature:10978551-10978735:1:exon
so has part: feature:10979501-10979688:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10958318-10958336:1:exon

position:10958336:1
position: 10958336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10959293-10959321:1:exon

position:10959293:1
position: 10959293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10959321:1
position: 10959321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10959703-10959957:1:exon

position:10959703:1
position: 10959703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10959957:1
position: 10959957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10966493-10966699:1:exon

position:10966493:1
position: 10966493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10966699:1
position: 10966699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10967933-10967993:1:exon

position:10967933:1
position: 10967933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10967993:1
position: 10967993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10969676-10969869:1:exon

position:10969676:1
position: 10969676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10969869:1
position: 10969869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10970043-10970108:1:exon

position:10970043:1
position: 10970043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10970108:1
position: 10970108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10973211-10973373:1:exon

position:10973211:1
position: 10973211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10973373:1
position: 10973373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:10978551-10978735:1:exon

position:10978551:1
position: 10978551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10978735:1
position: 10978735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:10979501-10979688:1:exon

position:10979501:1
position: 10979501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116780035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116780035
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DDB1- and CUL4-associated factor 12-like isoform X2
translation: MLTGWLWPGRKRPMNGYGWDHSVQKRKRLPPVKRSVVYYLKGREVRMQNESSYHRLLHGYAAQQLPSLLKEREFHLGILNKVFASQWLNHRQVVCGTKCNTLFVIDVQTGQITKIPILKDREPGMVNQQGCGIHAIELNPSRTLLATGGDNPNSLAIYHLPTLDPVCVGDDGHKDWIFSIAWISDTMAVSGSRDGSMGLWEVTEDVLSKSNARHNVSQVPVYAHITHRALKDIPKENTNPDNCKVRALAFNNKNKELGAVSLDGYFHLWKAEYTLSKLLSTKLPYCRENVCLAYGQEWSVYAVGSQAHVSFLDPRQPSHNVKSVCSKERGSGIRSVSFYEHIITVGTGQGSLLFYDIRAQRFLDEKPPRACYGQKQKLGGSEILKLTTGKGWLNHDETWRNYFSDIHFFPNAVYTHCYDSSGTKLFVAGGPLPSGLHGNYAGLWS
SIO_010081: LOC116780035
subclass of: SO_0000673
so part of: LOC116780035
location: join(10958318..10958336,10959293..10959321,10959703..10959957,10966493..10966699,10967933..10967993,10969676..10969869,10970043..10970108,10973211..10973373,10978551..10978735,10979501..10979659)
location: region:10958318-10979659:1
so has part: feature:10958318-10958336:1:exon
so has part: feature:10959293-10959321:1:exon
so has part: feature:10959703-10959957:1:exon
so has part: feature:10966493-10966699:1:exon
so has part: feature:10967933-10967993:1:exon
so has part: feature:10969676-10969869:1:exon
so has part: feature:10970043-10970108:1:exon
so has part: feature:10973211-10973373:1:exon
so has part: feature:10978551-10978735:1:exon
so has part: feature:10979501-10979659:1:exon

XP_032530432.1
type: Protein
SIO_000068: ncbiprotein

position:10979659:1
position: 10979659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10958318-10958336:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10959293-10959321:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10959703-10959957:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10966493-10966699:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10967933-10967993:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10969676-10969869:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10970043-10970108:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10973211-10973373:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10978551-10978735:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10979501-10979659:1:exon

LOC116780035
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116780035
product: DDB1- and CUL4-associated factor 12-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 23% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674540.1
SIO_010081: LOC116780035
subclass of: SO_0000673
so part of: LOC116780035
location: join(10958902..10958973,10959703..10959957,10966493..10966699,10967933..10967993,10969676..10969869,10970043..10970108,10973211..10973373,10978551..10978735,10979501..10979688)
location: region:10958902-10979688:1
so has part: feature:10958902-10958973:1:exon
so has part: feature:10959703-10959957:1:exon
so has part: feature:10966493-10966699:1:exon
so has part: feature:10967933-10967993:1:exon
so has part: feature:10969676-10969869:1:exon
so has part: feature:10970043-10970108:1:exon
so has part: feature:10973211-10973373:1:exon
so has part: feature:10978551-10978735:1:exon
so has part: feature:10979501-10979688:1:exon

position:10958902:1
position: 10958902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10958902-10958973:1:exon

position:10958973:1
position: 10958973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10959703-10959957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10966493-10966699:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10967933-10967993:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10969676-10969869:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10970043-10970108:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10973211-10973373:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10978551-10978735:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10979501-10979688:1:exon

LOC116780035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116780035
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DDB1- and CUL4-associated factor 12-like isoform X1
translation: MARKAVSRKRKAATAAAGGLQGEQYGWDHSVQKRKRLPPVKRSVVYYLKGREVRMQNESSYHRLLHGYAAQQLPSLLKEREFHLGILNKVFASQWLNHRQVVCGTKCNTLFVIDVQTGQITKIPILKDREPGMVNQQGCGIHAIELNPSRTLLATGGDNPNSLAIYHLPTLDPVCVGDDGHKDWIFSIAWISDTMAVSGSRDGSMGLWEVTEDVLSKSNARHNVSQVPVYAHITHRALKDIPKENTNPDNCKVRALAFNNKNKELGAVSLDGYFHLWKAEYTLSKLLSTKLPYCRENVCLAYGQEWSVYAVGSQAHVSFLDPRQPSHNVKSVCSKERGSGIRSVSFYEHIITVGTGQGSLLFYDIRAQRFLDEKPPRACYGQKQKLGGSEILKLTTGKGWLNHDETWRNYFSDIHFFPNAVYTHCYDSSGTKLFVAGGPLPSGLHGNYAGLWS
SIO_010081: LOC116780035
subclass of: SO_0000673
so part of: LOC116780035
location: join(10958902..10958973,10959703..10959957,10966493..10966699,10967933..10967993,10969676..10969869,10970043..10970108,10973211..10973373,10978551..10978735,10979501..10979659)
location: region:10958902-10979659:1
so has part: feature:10958902-10958973:1:exon
so has part: feature:10959703-10959957:1:exon
so has part: feature:10966493-10966699:1:exon
so has part: feature:10967933-10967993:1:exon
so has part: feature:10969676-10969869:1:exon
so has part: feature:10970043-10970108:1:exon
so has part: feature:10973211-10973373:1:exon
so has part: feature:10978551-10978735:1:exon
so has part: feature:10979501-10979659:1:exon

XP_032530431.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10958902-10958973:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10959703-10959957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10966493-10966699:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10967933-10967993:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10969676-10969869:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10970043-10970108:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10973211-10973373:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10978551-10978735:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10979501-10979659:1:exon

LOC116780075
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780075
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11031976..11032384
location: region:11031976-11032384:1
so has part: feature:11031976-11032384:1:exon
subclass of: SO_0000011

116780075
type: Gene
SIO_000068: ncbigene

position:11031976:1
position: 11031976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11032384:1
position: 11032384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11031976-11032384:1:exon

LOC116780075
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780075
product: uncharacterized LOC116780075
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004354317.1
SIO_010081: LOC116780075
subclass of: SO_0000673
so part of: LOC116780075
location: join(11031976..11032044,11032261..11032384)
location: region:11031976-11032384:1
so has part: feature:11031976-11032044:1:exon
so has part: feature:11032261-11032384:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11031976-11032044:1:exon

position:11032044:1
position: 11032044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11032261-11032384:1:exon

position:11032261:1
position: 11032261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116780027
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780027
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11120366..11256755
location: region:11120366-11256755:1
so has part: feature:11120366-11256755:1:exon
subclass of: SO_0000010

116780027
type: Gene
SIO_000068: ncbigene

position:11120366:1
position: 11120366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11256755:1
position: 11256755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11120366-11256755:1:exon

LOC116780027
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116780027
product: ubiquitin-associated protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674529.1
SIO_010081: LOC116780027
subclass of: SO_0000673
so part of: LOC116780027
location: join(11120366..11120464,11125556..11125633,11126754..11126864,11130947..11131100,11133199..11133276,11148502..11148556,11149738..11149841,11166726..11166778,11172031..11172098,11173909..11174107,11175064..11175268,11190958..11191232,11192321..11192499,11194233..11194440,11195619..11195658,11198643..11198826,11200425..11200491,11201755..11201941,11203143..11203234,11210860..11210907,11245843..11245921,11249585..11249799,11251904..11252004,11252085..11252194,11254210..11254277,11254976..11255167,11256618..11256755)
location: region:11120366-11256755:1
so has part: feature:11120366-11120464:1:exon
so has part: feature:11125556-11125633:1:exon
so has part: feature:11126754-11126864:1:exon
so has part: feature:11130947-11131100:1:exon
so has part: feature:11133199-11133276:1:exon
so has part: feature:11148502-11148556:1:exon
so has part: feature:11149738-11149841:1:exon
so has part: feature:11166726-11166778:1:exon
so has part: feature:11172031-11172098:1:exon
so has part: feature:11173909-11174107:1:exon
so has part: feature:11175064-11175268:1:exon
so has part: feature:11190958-11191232:1:exon
so has part: feature:11192321-11192499:1:exon
so has part: feature:11194233-11194440:1:exon
so has part: feature:11195619-11195658:1:exon
so has part: feature:11198643-11198826:1:exon
so has part: feature:11200425-11200491:1:exon
so has part: feature:11201755-11201941:1:exon
so has part: feature:11203143-11203234:1:exon
so has part: feature:11210860-11210907:1:exon
so has part: feature:11245843-11245921:1:exon
so has part: feature:11249585-11249799:1:exon
so has part: feature:11251904-11252004:1:exon
so has part: feature:11252085-11252194:1:exon
so has part: feature:11254210-11254277:1:exon
so has part: feature:11254976-11255167:1:exon
so has part: feature:11256618-11256755:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11120366-11120464:1:exon

position:11120464:1
position: 11120464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11125556-11125633:1:exon

position:11125556:1
position: 11125556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11125633:1
position: 11125633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11126754-11126864:1:exon

position:11126754:1
position: 11126754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11126864:1
position: 11126864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11130947-11131100:1:exon

position:11130947:1
position: 11130947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11131100:1
position: 11131100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11133199-11133276:1:exon

position:11133199:1
position: 11133199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11133276:1
position: 11133276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11148502-11148556:1:exon

position:11148502:1
position: 11148502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11148556:1
position: 11148556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11149738-11149841:1:exon

position:11149738:1
position: 11149738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11149841:1
position: 11149841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11166726-11166778:1:exon

position:11166726:1
position: 11166726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11166778:1
position: 11166778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11172031-11172098:1:exon

position:11172031:1
position: 11172031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11172098:1
position: 11172098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11173909-11174107:1:exon

position:11173909:1
position: 11173909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11174107:1
position: 11174107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:11175064-11175268:1:exon

position:11175064:1
position: 11175064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11175268:1
position: 11175268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:11190958-11191232:1:exon

position:11190958:1
position: 11190958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11191232:1
position: 11191232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:11192321-11192499:1:exon

position:11192321:1
position: 11192321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11192499:1
position: 11192499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:11194233-11194440:1:exon

position:11194233:1
position: 11194233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11194440:1
position: 11194440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:11195619-11195658:1:exon

position:11195619:1
position: 11195619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11195658:1
position: 11195658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:11198643-11198826:1:exon

position:11198643:1
position: 11198643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11198826:1
position: 11198826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:11200425-11200491:1:exon

position:11200425:1
position: 11200425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11200491:1
position: 11200491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:11201755-11201941:1:exon

position:11201755:1
position: 11201755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11201941:1
position: 11201941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:11203143-11203234:1:exon

position:11203143:1
position: 11203143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11203234:1
position: 11203234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:11210860-11210907:1:exon

position:11210860:1
position: 11210860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11210907:1
position: 11210907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:11245843-11245921:1:exon

position:11245843:1
position: 11245843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11245921:1
position: 11245921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:11249585-11249799:1:exon

position:11249585:1
position: 11249585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11249799:1
position: 11249799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:11251904-11252004:1:exon

position:11251904:1
position: 11251904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11252004:1
position: 11252004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:11252085-11252194:1:exon

position:11252085:1
position: 11252085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11252194:1
position: 11252194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:11254210-11254277:1:exon

position:11254210:1
position: 11254210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11254277:1
position: 11254277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:11254976-11255167:1:exon

position:11254976:1
position: 11254976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11255167:1
position: 11255167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:11256618-11256755:1:exon

position:11256618:1
position: 11256618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116780027
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116780027
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-associated protein 2-like
translation: MMTSVSSERTRGTRDKMQISTTQPTQPQKQVVQATAEQIRFAQMIYDKNDADFEDKVKQLMEVTGKNQDECIVALHDCNGDMNRAINILLEGISDTTSWETVGGKKKSLGKEGLENKENREKRGDREMSRRWGSSNRRGRGGSHDREFRAEENGVGNNQGDRPSDRGKRGHVRGFGRGRGRGAGRFSAQGMGTFNPADYMESSATDGFGTKSDIWETGQNDADDGTGPWKNSVEEWTAEDWNEDLSETKVFTASSVPAENHVTPRQSIDLVTLFQKPEKPVTFTQETEGNSFEVPQQQTFGQALVFTNSQHSTQMASGSGSSSAVNSYSPQSLSAVLCSGFGELGSSKLTNSAGSQILDQLKSPGLGQFTSQQNNNSSTTTTTSSWDLKPPITQSSVLSQFDLKSQPEPSPVLNHLAQRQQQQTQAVPVSPPGLESFSSQVKLHKPSPVDTSTAVSKMLQLSTISMDNQAVTAHQNQQKQIKPPKRRIIPSSKIPASAVEMPGSSDVTGLNVQFGALEFGSEPALPELGSTSSSENTNQATNNSLYTKSLKYVDPLNTSLPISNTVQDSTYTTSAISSSSLTCSSQSTSPVTTSSYDQTSVHSRIAYQSSMAPSEPTPVADTNGHSSVRTQATLDTTSSVPVLKTEPSPSLPSGGSLPNMVSTTASLLPSASQHAATLCSLPQSSDLASSSLSQLSSSLSNHQSSLSPASVLSSSTSHVHTSIENTTSLQPSTTFSTASTSATSTTSSVVSMASSMNTTNSLGLSVTSVSATTRAAPLVSSGKAPPNLPQGVPPLLHNQYIVGPGGLLPAYPIYGYDDLQMLQSRLPMDYYGITFPAPATLTGRDGSLVNNPYSGDITKFGRGDSASPAPTTTLAQPQQNQPQTHHTTQQPFLNPTLPPGYSYTGLPYYAGVPGVPSAFQYGPTMFVPPASAKQHGVNLNTTSTPFQQASGYGQHGYGAGGYDDLTQGAAAGDYSKGGYNVSSQAQNKSAGTGPGKGVSVTSSNTSVPDINGSVYNKTQTFDKQGFHAGTPPPFSLPSGLGSTGPLNPGAAPGYAPAPFLHILPAHQQPHSQMLHHHLHQDGQGGSGQRNQPSTMQQKSQATKTTYGTSPYWTN
SIO_010081: LOC116780027
subclass of: SO_0000673
so part of: LOC116780027
location: join(11120366..11120464,11125556..11125633,11126754..11126864,11130947..11131100,11133199..11133276,11148502..11148556,11149738..11149841,11166726..11166778,11172031..11172098,11173909..11174107,11175064..11175268,11190958..11191232,11192321..11192499,11194233..11194440,11195619..11195658,11198643..11198826,11200425..11200491,11201755..11201941,11203143..11203234,11210860..11210907,11245843..11245921,11249585..11249799,11251904..11252004,11252085..11252194,11254210..11254277,11254976..11255167,11256618..11256713)
location: region:11120366-11256713:1
so has part: feature:11120366-11120464:1:exon
so has part: feature:11125556-11125633:1:exon
so has part: feature:11126754-11126864:1:exon
so has part: feature:11130947-11131100:1:exon
so has part: feature:11133199-11133276:1:exon
so has part: feature:11148502-11148556:1:exon
so has part: feature:11149738-11149841:1:exon
so has part: feature:11166726-11166778:1:exon
so has part: feature:11172031-11172098:1:exon
so has part: feature:11173909-11174107:1:exon
so has part: feature:11175064-11175268:1:exon
so has part: feature:11190958-11191232:1:exon
so has part: feature:11192321-11192499:1:exon
so has part: feature:11194233-11194440:1:exon
so has part: feature:11195619-11195658:1:exon
so has part: feature:11198643-11198826:1:exon
so has part: feature:11200425-11200491:1:exon
so has part: feature:11201755-11201941:1:exon
so has part: feature:11203143-11203234:1:exon
so has part: feature:11210860-11210907:1:exon
so has part: feature:11245843-11245921:1:exon
so has part: feature:11249585-11249799:1:exon
so has part: feature:11251904-11252004:1:exon
so has part: feature:11252085-11252194:1:exon
so has part: feature:11254210-11254277:1:exon
so has part: feature:11254976-11255167:1:exon
so has part: feature:11256618-11256713:1:exon

XP_032530420.1
type: Protein
SIO_000068: ncbiprotein

position:11256713:1
position: 11256713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11120366-11120464:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11125556-11125633:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11126754-11126864:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11130947-11131100:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11133199-11133276:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11148502-11148556:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11149738-11149841:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11166726-11166778:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11172031-11172098:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11173909-11174107:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11175064-11175268:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11190958-11191232:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11192321-11192499:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:11194233-11194440:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:11195619-11195658:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11198643-11198826:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11200425-11200491:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:11201755-11201941:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:11203143-11203234:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:11210860-11210907:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:11245843-11245921:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:11249585-11249799:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:11251904-11252004:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:11252085-11252194:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:11254210-11254277:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:11254976-11255167:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:11256618-11256713:1:exon

LOC116780061
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780061
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11153931..11178312)
location: region:11153931-11178312:-1
so has part: feature:11153931-11178312:-1:exon
subclass of: SO_0000011

116780061
type: Gene
SIO_000068: ncbigene

position:11153931:-1
position: 11153931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11178312:-1
position: 11178312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11153931-11178312:-1:exon

LOC116780061
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780061
product: uncharacterized LOC116780061
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004354304.1
SIO_010081: LOC116780061
subclass of: SO_0000673
so part of: LOC116780061
location: complement(join(11153931..11153970,11171442..11171446,11178208..11178312))
location: region:11153931-11178312:-1
so has part: feature:11178208-11178312:-1:exon
so has part: feature:11171442-11171446:-1:exon
so has part: feature:11153931-11153970:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11178208-11178312:-1:exon

position:11178208:-1
position: 11178208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11171442-11171446:-1:exon

position:11171442:-1
position: 11171442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11171446:-1
position: 11171446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11153931-11153970:-1:exon

position:11153970:-1
position: 11153970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116780093
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780093
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 11191928..11192010
location: region:11191928-11192010:1
so has part: feature:11191928-11192010:1:exon
subclass of: SO_0000578

116780093
type: Gene
SIO_000068: ncbigene

position:11191928:1
position: 11191928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11192010:1
position: 11192010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11191928-11192010:1:exon

LOC116780093
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: snoRNA
gene: LOC116780093
product: small nucleolar RNA SNORD121A
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01191
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004354325.1
SIO_010081: LOC116780093
subclass of: SO_0000673
so part of: LOC116780093
location: 11191928..11192010
location: region:11191928-11192010:1
so has part: feature:11191928-11192010:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11191928-11192010:1:exon

LOC116780070
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780070
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11235139..11240741
location: region:11235139-11240741:1
so has part: feature:11235139-11240741:1:exon
subclass of: SO_0000011

116780070
type: Gene
SIO_000068: ncbigene

position:11235139:1
position: 11235139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11240741:1
position: 11240741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11235139-11240741:1:exon

LOC116780070
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116780070
product: uncharacterized LOC116780070
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004354313.1
SIO_010081: LOC116780070
subclass of: SO_0000673
so part of: LOC116780070
location: join(11235139..11235291,11237122..11237126,11240729..11240741)
location: region:11235139-11240741:1
so has part: feature:11235139-11235291:1:exon
so has part: feature:11237122-11237126:1:exon
so has part: feature:11240729-11240741:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11235139-11235291:1:exon

position:11235291:1
position: 11235291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11237122-11237126:1:exon

position:11237122:1
position: 11237122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11237126:1
position: 11237126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11240729-11240741:1:exon

position:11240729:1
position: 11240729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116780044
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780044
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11262900..11393650)
location: region:11262900-11393650:-1
so has part: feature:11262900-11393650:-1:exon
subclass of: SO_0000010

116780044
type: Gene
SIO_000068: ncbigene

position:11262900:-1
position: 11262900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11393650:-1
position: 11393650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11262900-11393650:-1:exon

LOC116780044
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116780044
product: ubiquitin-conjugating enzyme E2 R2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 19 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674552.1
SIO_010081: LOC116780044
subclass of: SO_0000673
so part of: LOC116780044
location: complement(join(11262900..11263223,11272385..11272519,11276146..11276243,11297047..11297133,11393457..11393650))
location: region:11262900-11393650:-1
so has part: feature:11393457-11393650:-1:exon
so has part: feature:11297047-11297133:-1:exon
so has part: feature:11276146-11276243:-1:exon
so has part: feature:11272385-11272519:-1:exon
so has part: feature:11262900-11263223:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11393457-11393650:-1:exon

position:11393457:-1
position: 11393457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11297047-11297133:-1:exon

position:11297047:-1
position: 11297047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11297133:-1
position: 11297133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11276146-11276243:-1:exon

position:11276146:-1
position: 11276146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11276243:-1
position: 11276243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11272385-11272519:-1:exon

position:11272385:-1
position: 11272385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11272519:-1
position: 11272519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11262900-11263223:-1:exon

position:11263223:-1
position: 11263223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116780044
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116780044
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 R2
translation: MAQQQMSSSQKALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFRKWRDSKGKDKEYAEIIRKQVLATKAEAEKDGVKVPTTLAEYCIKTKVPSNDNSSDLLYDDLYDDDIDDEDEEEEDADCYDDDDSGNEES
SIO_010081: LOC116780044
subclass of: SO_0000673
so part of: LOC116780044
location: complement(join(11263004..11263223,11272385..11272519,11276146..11276243,11297047..11297133,11393457..11393633))
location: region:11263004-11393633:-1
so has part: feature:11393457-11393633:-1:exon
so has part: feature:11297047-11297133:-1:exon
so has part: feature:11276146-11276243:-1:exon
so has part: feature:11272385-11272519:-1:exon
so has part: feature:11263004-11263223:-1:exon

XP_032530443.1
type: Protein
SIO_000068: ncbiprotein

position:11263004:-1
position: 11263004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11393633:-1
position: 11393633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11393457-11393633:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11297047-11297133:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11276146-11276243:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11272385-11272519:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11263004-11263223:-1:exon

LOC116780040
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780040
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11513315..11551220)
location: region:11513315-11551220:-1
so has part: feature:11513315-11551220:-1:exon
subclass of: SO_0000010

116780040
type: Gene
SIO_000068: ncbigene

position:11513315:-1
position: 11513315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11551220:-1
position: 11551220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11513315-11551220:-1:exon

LOC116780040
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116780040
product: 5'-AMP-activated protein kinase catalytic subunit alpha-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674549.1
SIO_010081: LOC116780040
subclass of: SO_0000673
so part of: LOC116780040
location: complement(join(11513315..11513559,11516109..11516235,11516645..11517131,11520816..11521040,11521912..11521999,11523592..11523736,11524208..11524301,11527500..11527641,11551103..11551220))
location: region:11513315-11551220:-1
so has part: feature:11551103-11551220:-1:exon
so has part: feature:11527500-11527641:-1:exon
so has part: feature:11524208-11524301:-1:exon
so has part: feature:11523592-11523736:-1:exon
so has part: feature:11521912-11521999:-1:exon
so has part: feature:11520816-11521040:-1:exon
so has part: feature:11516645-11517131:-1:exon
so has part: feature:11516109-11516235:-1:exon
so has part: feature:11513315-11513559:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11551103-11551220:-1:exon

position:11551103:-1
position: 11551103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11527500-11527641:-1:exon

position:11527500:-1
position: 11527500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11527641:-1
position: 11527641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11524208-11524301:-1:exon

position:11524208:-1
position: 11524208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11524301:-1
position: 11524301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11523592-11523736:-1:exon

position:11523592:-1
position: 11523592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11523736:-1
position: 11523736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11521912-11521999:-1:exon

position:11521912:-1
position: 11521912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11521999:-1
position: 11521999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11520816-11521040:-1:exon

position:11520816:-1
position: 11520816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11521040:-1
position: 11521040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11516645-11517131:-1:exon

position:11516645:-1
position: 11516645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11517131:-1
position: 11517131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11516109-11516235:-1:exon

position:11516109:-1
position: 11516109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11516235:-1
position: 11516235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11513315-11513559:-1:exon

position:11513559:-1
position: 11513559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116780040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116780040
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5'-AMP-activated protein kinase catalytic subunit alpha-1-like
translation: MAAADKQKHEHGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPTDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVSSLLKHMLQVDPMKRATIRNIREHEWFKQDLPKYLFPEDPSYSSTMIDDEALKEVCEKFECTEEEVLSCLYSQNHQDPLVVAYHLIIDNRRIMNEAKDFYLATSPLDSFLDDHNLSRPHPERVPFLVAETPRPRHTLDELNPQKSKHQGVRKAKWHLGIRSQSRPNDIMAEVCRAIKQLDYEWKVVNPYYLRVRRKNPVTNAYSKMSLQLYQVDSRTYLLDFRSIDDEITEAKSGTATPQRSGSVSNCRSCQKDSDADAQGKSADISLTPSVIASLGSSKADLTPRPGSHTIEFFEMCANLIKILAQ
SIO_010081: LOC116780040
subclass of: SO_0000673
so part of: LOC116780040
location: complement(join(11513315..11513559,11516109..11516235,11516645..11517131,11520816..11521040,11521912..11521999,11523592..11523736,11524208..11524301,11527500..11527641,11551103..11551205))
location: region:11513315-11551205:-1
so has part: feature:11551103-11551205:-1:exon
so has part: feature:11527500-11527641:-1:exon
so has part: feature:11524208-11524301:-1:exon
so has part: feature:11523592-11523736:-1:exon
so has part: feature:11521912-11521999:-1:exon
so has part: feature:11520816-11521040:-1:exon
so has part: feature:11516645-11517131:-1:exon
so has part: feature:11516109-11516235:-1:exon
so has part: feature:11513315-11513559:-1:exon

XP_032530440.1
type: Protein
SIO_000068: ncbiprotein

position:11551205:-1
position: 11551205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11551103-11551205:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11527500-11527641:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11524208-11524301:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11523592-11523736:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11521912-11521999:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11520816-11521040:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11516645-11517131:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11516109-11516235:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11513315-11513559:-1:exon

LOC116780049
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116780049
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11562408..11565015)
location: region:11562408-11565015:-1
so has part: feature:11562408-11565015:-1:exon
subclass of: SO_0000010

116780049
type: Gene
SIO_000068: ncbigene

position:11562408:-1
position: 11562408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11565015:-1
position: 11565015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11562408-11565015:-1:exon

LOC116780049
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116780049
product: 60S ribosomal protein L37
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 1 EST, 1 Protein, and 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674561.1
SIO_010081: LOC116780049
subclass of: SO_0000673
so part of: LOC116780049
location: complement(join(11562408..11562524,11563804..11563888,11564136..11564271,11564967..11565015))
location: region:11562408-11565015:-1
so has part: feature:11564967-11565015:-1:exon
so has part: feature:11564136-11564271:-1:exon
so has part: feature:11563804-11563888:-1:exon
so has part: feature:11562408-11562524:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11564967-11565015:-1:exon

position:11564967:-1
position: 11564967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11564136-11564271:-1:exon

position:11564136:-1
position: 11564136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11564271:-1
position: 11564271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11563804-11563888:-1:exon

position:11563804:-1
position: 11563804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11563888:-1
position: 11563888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11562408-11562524:-1:exon

position:11562524:-1
position: 11562524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116780049
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116780049
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L37
translation: MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKRVYRRFRNGFREGTTPKPKRAAVAASSSS
SIO_010081: LOC116780049
subclass of: SO_0000673
so part of: LOC116780049
location: complement(join(11562455..11562524,11563804..11563888,11564136..11564271,11564967..11564969))
location: region:11562455-11564969:-1
so has part: feature:11564967-11564969:-1:exon
so has part: feature:11564136-11564271:-1:exon
so has part: feature:11563804-11563888:-1:exon
so has part: feature:11562455-11562524:-1:exon

XP_032530452.1
type: Protein
SIO_000068: ncbiprotein