Chiroxiphia lanceolata isolate bChiLan1 chromosome 32, bChiLan1.pri, whole genome shotgun sequence.
type: Entry
definition: Chiroxiphia lanceolata isolate bChiLan1 chromosome 32, bChiLan1.pri, whole genome shotgun sequence.
sequence version: NC_045668.1
sequence date: 2020-02-29
sequence: sequence
division: CON
label: NC_045668.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA603801
dblink: SAMN12620979
keyword: WGS
keyword: RefSeq
source: Chiroxiphia lanceolata (lance-tailed manakin)
organism: Chiroxiphia lanceolata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Pipridae; Chiroxiphia.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020564.1.\nAssembly name: bChiLan1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/01/03. The original whole-genome shotgun project has the\naccession WNMC00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 08-OCT-2019\nAssembly Method :: FALCON v. DNANexus 1.9.0; FALCON-Unzip v.\n DNANexus 1.0.6; purge_haplotigs v.\n v1.0.3+ 1.Nov.2018; scaff10x v. 4.1.0;\n Bionano Solve DLS v. 3.2.1; Salsa HiC v.\n 2.2; Arrow smrtanalysis Pacbio polishing\n & gap filling v. 6.0.0.47841; longranger\n align v. 2.2.2; freebayes Illumina\n polishing v. 1.3.1; gEVAL manual curation\n v. 2019-10-08; VGP assembly pipeline v.\n 1.5\nAssembly Name :: bChiLan1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 67.75x\nSequencing Technology :: PacBio Sequel I CLR; llumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Chiroxiphia lanceolata Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 746205
topology: linear
so has quality: SO_0000987
location: 1..746205
location: region:1-746205:1
RO_0002162: 296741

NC_045668
type: RefSeq
SIO_000068: refseq

PRJNA603801
type: BioProject
SIO_000068: bioproject

SAMN12620979
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746205:1
position: 746205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-746205:1:source
so part of: sequence
organism: Chiroxiphia lanceolata
mol type: genomic DNA
isolate: bChiLan1
chromosome: 32
sex: female
tissue type: isolated red blood cells
dev stage: adult
country: Panama: Isla Boca Btava
lat lon: 8.2166658 N 82.2666656 W
collection date: 14-Apr-2017
collected by: Emily DuVal

296741
type: Taxonomy
SIO_000068: taxonomy

LOC116779901
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779901
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 35643..36661
location: region:35643-36661:1
so has part: feature:35643-36661:1:exon
subclass of: SO_0000010

116779901
type: Gene
SIO_000068: ncbigene

position:35643:1
position: 35643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36661:1
position: 36661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35643-36661:1:exon

LOC116779901
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779901
product: olfactory receptor 6F1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 29% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674405.1
SIO_010081: LOC116779901
subclass of: SO_0000673
so part of: LOC116779901
location: 35643..36661
location: region:35643-36661:1
so has part: feature:35643-36661:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35643-36661:1:exon

LOC116779901
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779901
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 6F1-like
translation: MFLSRQDELKFSMGAANETAVTEFILEGFPGLDQSLQLFLSVILLLMYLTTVTGNATIIFLVCVDHHLQTPMYFFISNLAFLEIWFTSSTSIKLFAILSSDQKTISLSSCFAQSYFYFALGCTEFVLLVVMAFDRWVAICQPLHYAATMEPQLCLCLVVAAWLIGFTLLSYRLFLSQLSFCGSNRIPHFLCDNSPLFKLSCSDTSLLWKIDSVFLSCVVLGSLCLTLAFYTCILFCILQLPAASGRKKAFTTCSSHLITLSIAYGSCIALYMCPSADVSLKTNRIVALLNTVLYPFLNPFVYSLRNKAVILALNKSIATTITKLFP
SIO_010081: LOC116779901
subclass of: SO_0000673
so part of: LOC116779901
location: 35681..36661
location: region:35681-36661:1
so has part: feature:35681-36661:1:exon

XP_032530296.1
type: Protein
SIO_000068: ncbiprotein

position:35681:1
position: 35681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35681-36661:1:exon

LOC116779905
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779905
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(90482..93363)
location: region:90482-93363:-1
so has part: feature:90482-93363:-1:exon
subclass of: SO_0000010

116779905
type: Gene
SIO_000068: ncbigene

position:90482:-1
position: 90482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93363:-1
position: 93363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90482-93363:-1:exon

LOC116779905
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779905
product: RNA-binding protein 42-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032674426.1
SIO_010081: LOC116779905
subclass of: SO_0000673
so part of: LOC116779905
location: complement(join(90482..90934,92590..92692,93195..93363))
location: region:90482-93363:-1
so has part: feature:93195-93363:-1:exon
so has part: feature:92590-92692:-1:exon
so has part: feature:90482-90934:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:93195-93363:-1:exon

position:93195:-1
position: 93195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:92590-92692:-1:exon

position:92590:-1
position: 92590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92692:-1
position: 92692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:90482-90934:-1:exon

position:90934:-1
position: 90934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116779905
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779905
product: RNA-binding protein 42-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032674425.1
SIO_010081: LOC116779905
subclass of: SO_0000673
so part of: LOC116779905
location: complement(join(90482..90934,92590..92692,93084..93178))
location: region:90482-93178:-1
so has part: feature:93084-93178:-1:exon
so has part: feature:92590-92692:-1:exon
so has part: feature:90482-90934:-1:exon

position:93178:-1
position: 93178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93084-93178:-1:exon

position:93084:-1
position: 93084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:92590-92692:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90482-90934:-1:exon

LOC116779905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779905
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 42-like isoform X2
translation: MEAEMALFEQEVLGAPGPAPGDPLAPPPILQPIISTNTYQQVSSDILGGASGLLPAVIPAPTLQYRAKTTRECSVPAALPLWAVSPPHSFSWEVLCSPAQEDSALLAALCSWSRREAAATIP
SIO_010081: LOC116779905
subclass of: SO_0000673
so part of: LOC116779905
location: complement(join(90689..90934,92590..92692,93195..93214))
location: region:90689-93214:-1
so has part: feature:93195-93214:-1:exon
so has part: feature:92590-92692:-1:exon
so has part: feature:90689-90934:-1:exon

XP_032530317.1
type: Protein
SIO_000068: ncbiprotein

position:90689:-1
position: 90689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93214:-1
position: 93214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93195-93214:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92590-92692:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90689-90934:-1:exon

LOC116779905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779905
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 42-like isoform X1
translation: MATGVGLGGVGWSLRVAMATEAGSLWFEQEVLGAPGPAPGDPLAPPPILQPIISTNTYQQVSSDILGGASGLLPAVIPAPTLQYRAKTTRECSVPAALPLWAVSPPHSFSWEVLCSPAQEDSALLAALCSWSRREAAATIP
SIO_010081: LOC116779905
subclass of: SO_0000673
so part of: LOC116779905
location: complement(join(90689..90934,92590..92692,93084..93160))
location: region:90689-93160:-1
so has part: feature:93084-93160:-1:exon
so has part: feature:92590-92692:-1:exon
so has part: feature:90689-90934:-1:exon

XP_032530316.1
type: Protein
SIO_000068: ncbiprotein

position:93160:-1
position: 93160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93084-93160:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92590-92692:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90689-90934:-1:exon

LOC116779902
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779902
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(110809..662821)
location: region:110809-662821:-1
so has part: feature:110809-662821:-1:exon
subclass of: SO_0000010

116779902
type: Gene
SIO_000068: ncbigene

position:110809:-1
position: 110809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:662821:-1
position: 662821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110809-662821:-1:exon

LOC116779902
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779902
product: ribosome-binding protein 1-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032674411.1
SIO_010081: LOC116779902
subclass of: SO_0000673
so part of: LOC116779902
location: complement(join(110809..111768,113149..113313,114884..115048,118594..118761,121011..121178,651593..651698,662817..662821))
location: region:110809-662821:-1
so has part: feature:662817-662821:-1:exon
so has part: feature:651593-651698:-1:exon
so has part: feature:121011-121178:-1:exon
so has part: feature:118594-118761:-1:exon
so has part: feature:114884-115048:-1:exon
so has part: feature:113149-113313:-1:exon
so has part: feature:110809-111768:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:662817-662821:-1:exon

position:662817:-1
position: 662817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:651593-651698:-1:exon

position:651593:-1
position: 651593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:651698:-1
position: 651698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:121011-121178:-1:exon

position:121011:-1
position: 121011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121178:-1
position: 121178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:118594-118761:-1:exon

position:118594:-1
position: 118594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118761:-1
position: 118761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:114884-115048:-1:exon

position:114884:-1
position: 114884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115048:-1
position: 115048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:113149-113313:-1:exon

position:113149:-1
position: 113149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113313:-1
position: 113313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:110809-111768:-1:exon

position:111768:-1
position: 111768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116779902
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779902
product: ribosome-binding protein 1-like, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032674415.1
SIO_010081: LOC116779902
subclass of: SO_0000673
so part of: LOC116779902
location: complement(join(110809..111768,113149..113313,114884..115048,121059..121178,329285..329404,651545..651698,662817..662821))
location: region:110809-662821:-1
so has part: feature:662817-662821:-1:exon
so has part: feature:651545-651698:-1:exon
so has part: feature:329285-329404:-1:exon
so has part: feature:121059-121178:-1:exon
so has part: feature:114884-115048:-1:exon
so has part: feature:113149-113313:-1:exon
so has part: feature:110809-111768:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:662817-662821:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:651545-651698:-1:exon

position:651545:-1
position: 651545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:329285-329404:-1:exon

position:329285:-1
position: 329285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329404:-1
position: 329404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:121059-121178:-1:exon

position:121059:-1
position: 121059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:114884-115048:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:113149-113313:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:110809-111768:-1:exon

LOC116779902
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779902
product: ribosome-binding protein 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032674407.1
SIO_010081: LOC116779902
subclass of: SO_0000673
so part of: LOC116779902
location: complement(join(110809..111768,113149..113313,114884..115048,118594..118761,121059..121178,329285..329404,651545..651698,662817..662821))
location: region:110809-662821:-1
so has part: feature:662817-662821:-1:exon
so has part: feature:651545-651698:-1:exon
so has part: feature:329285-329404:-1:exon
so has part: feature:121059-121178:-1:exon
so has part: feature:118594-118761:-1:exon
so has part: feature:114884-115048:-1:exon
so has part: feature:113149-113313:-1:exon
so has part: feature:110809-111768:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:662817-662821:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:651545-651698:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:329285-329404:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:121059-121178:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:118594-118761:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:114884-115048:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:113149-113313:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:110809-111768:-1:exon

LOC116779902
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779902
product: ribosome-binding protein 1-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032674412.1
SIO_010081: LOC116779902
subclass of: SO_0000673
so part of: LOC116779902
location: complement(join(110809..111768,113149..113313,114884..115048,121011..121178,329285..329404,651545..651698,662817..662821))
location: region:110809-662821:-1
so has part: feature:662817-662821:-1:exon
so has part: feature:651545-651698:-1:exon
so has part: feature:329285-329404:-1:exon
so has part: feature:121011-121178:-1:exon
so has part: feature:114884-115048:-1:exon
so has part: feature:113149-113313:-1:exon
so has part: feature:110809-111768:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:662817-662821:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:651545-651698:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:329285-329404:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:121011-121178:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:114884-115048:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:113149-113313:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:110809-111768:-1:exon

LOC116779902
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779902
product: ribosome-binding protein 1-like, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032674413.1
SIO_010081: LOC116779902
subclass of: SO_0000673
so part of: LOC116779902
location: complement(join(110809..111768,113149..113313,114884..115019,118733..118761,121011..121178,329285..329404,651545..651698,662817..662821))
location: region:110809-662821:-1
so has part: feature:662817-662821:-1:exon
so has part: feature:651545-651698:-1:exon
so has part: feature:329285-329404:-1:exon
so has part: feature:121011-121178:-1:exon
so has part: feature:118733-118761:-1:exon
so has part: feature:114884-115019:-1:exon
so has part: feature:113149-113313:-1:exon
so has part: feature:110809-111768:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:662817-662821:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:651545-651698:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:329285-329404:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:121011-121178:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:118733-118761:-1:exon

position:118733:-1
position: 118733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:114884-115019:-1:exon

position:115019:-1
position: 115019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:113149-113313:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:110809-111768:-1:exon

LOC116779902
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779902
product: ribosome-binding protein 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032674406.1
SIO_010081: LOC116779902
subclass of: SO_0000673
so part of: LOC116779902
location: complement(join(110809..111768,113149..113313,114884..115048,118594..118761,121011..121178,329285..329404,651545..651698,662817..662821))
location: region:110809-662821:-1
so has part: feature:662817-662821:-1:exon
so has part: feature:651545-651698:-1:exon
so has part: feature:329285-329404:-1:exon
so has part: feature:121011-121178:-1:exon
so has part: feature:118594-118761:-1:exon
so has part: feature:114884-115048:-1:exon
so has part: feature:113149-113313:-1:exon
so has part: feature:110809-111768:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:662817-662821:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:651545-651698:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:329285-329404:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:121011-121178:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:118594-118761:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:114884-115048:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:113149-113313:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:110809-111768:-1:exon

LOC116779902
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779902
product: ribosome-binding protein 1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_032674408.1
SIO_010081: LOC116779902
subclass of: SO_0000673
so part of: LOC116779902
location: complement(join(110809..111768,113149..113313,114884..115048,118594..118761,121011..121178,336135..336193,337063..337179))
location: region:110809-337179:-1
so has part: feature:337063-337179:-1:exon
so has part: feature:336135-336193:-1:exon
so has part: feature:121011-121178:-1:exon
so has part: feature:118594-118761:-1:exon
so has part: feature:114884-115048:-1:exon
so has part: feature:113149-113313:-1:exon
so has part: feature:110809-111768:-1:exon

position:337179:-1
position: 337179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337063-337179:-1:exon

position:337063:-1
position: 337063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:336135-336193:-1:exon

position:336135:-1
position: 336135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336193:-1
position: 336193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:121011-121178:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:118594-118761:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:114884-115048:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:113149-113313:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:110809-111768:-1:exon

LOC116779902
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779902
product: ribosome-binding protein 1-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032674410.1
SIO_010081: LOC116779902
subclass of: SO_0000673
so part of: LOC116779902
location: complement(join(110809..111768,113149..113313,114884..115048,118594..118761,121059..121178,123345..123403,124294..124423,128472..128645))
location: region:110809-128645:-1
so has part: feature:128472-128645:-1:exon
so has part: feature:124294-124423:-1:exon
so has part: feature:123345-123403:-1:exon
so has part: feature:121059-121178:-1:exon
so has part: feature:118594-118761:-1:exon
so has part: feature:114884-115048:-1:exon
so has part: feature:113149-113313:-1:exon
so has part: feature:110809-111768:-1:exon

position:128645:-1
position: 128645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128472-128645:-1:exon

position:128472:-1
position: 128472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:124294-124423:-1:exon

position:124294:-1
position: 124294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124423:-1
position: 124423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:123345-123403:-1:exon

position:123345:-1
position: 123345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123403:-1
position: 123403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:121059-121178:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:118594-118761:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:114884-115048:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:113149-113313:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:110809-111768:-1:exon

LOC116779902
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779902
product: ribosome-binding protein 1-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032674409.1
SIO_010081: LOC116779902
subclass of: SO_0000673
so part of: LOC116779902
location: complement(join(110809..111768,113149..113313,114884..115048,118594..118761,121011..121178,123345..123403,124294..124423,128472..128644))
location: region:110809-128644:-1
so has part: feature:128472-128644:-1:exon
so has part: feature:124294-124423:-1:exon
so has part: feature:123345-123403:-1:exon
so has part: feature:121011-121178:-1:exon
so has part: feature:118594-118761:-1:exon
so has part: feature:114884-115048:-1:exon
so has part: feature:113149-113313:-1:exon
so has part: feature:110809-111768:-1:exon

position:128644:-1
position: 128644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128472-128644:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:124294-124423:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:123345-123403:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:121011-121178:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:118594-118761:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:114884-115048:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:113149-113313:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:110809-111768:-1:exon

LOC116779902
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779902
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116779902 isoform X6
translation: MKEDFQELIQQVKAMREDLQKGQESKKGREAEATKPQESLMKEDFKELIQQVKAMREDLQKGQESSKCDIQLLIEGLNKELGKTEEGNPPKAQGSGMEETLQQFCKEMKAMREDFQEGLASTKQDIQHLRADQNKEQGKTEKRNTPEAQGSGMEETLLQFCKQMKTMCEDLQKGQESTKGDIQLLKDLNKELVRNMKKMAKAQESKMDKKFQQLCQRIQTLEQELYGRQGSKQHSLQLLGAETEMEHGVLIESASEDEGFDTDA
SIO_010081: LOC116779902
subclass of: SO_0000673
so part of: LOC116779902
location: complement(join(111716..111768,113149..113313,114884..115048,118594..118761,121011..121178,651593..651668))
location: region:111716-651668:-1
so has part: feature:651593-651668:-1:exon
so has part: feature:121011-121178:-1:exon
so has part: feature:118594-118761:-1:exon
so has part: feature:114884-115048:-1:exon
so has part: feature:113149-113313:-1:exon
so has part: feature:111716-111768:-1:exon

XP_032530302.1
type: Protein
SIO_000068: ncbiprotein

position:111716:-1
position: 111716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:651668:-1
position: 651668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:651593-651668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:121011-121178:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:118594-118761:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114884-115048:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:113149-113313:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:111716-111768:-1:exon

LOC116779902
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779902
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116779902 isoform X9
translation: MKEDFQELIQQVKAMREDLQKGQESSKCDIQLLRADLNKEQGKTEEGNPPKAQGSGMEETLQQLCKEMKAMREDFQKGQESKKGREAEATKPQESLMKEDFKELIQQVKAMREDLQKGQESRKTEKRNTPEAQGSGMEETLLQFCKQMKTMCEDLQKGQESTKGDIQLLKDLNKELVRNMKKMAKAQESKMDKKFQQLCQRIQTLEQELYGRQGSKQHSLQLLGAETEMEHGVLIESASEDEGFDTDA
SIO_010081: LOC116779902
subclass of: SO_0000673
so part of: LOC116779902
location: complement(join(111716..111768,113149..113313,114884..115048,121059..121178,329285..329404,651545..651668))
location: region:111716-651668:-1
so has part: feature:651545-651668:-1:exon
so has part: feature:329285-329404:-1:exon
so has part: feature:121059-121178:-1:exon
so has part: feature:114884-115048:-1:exon
so has part: feature:113149-113313:-1:exon
so has part: feature:111716-111768:-1:exon

XP_032530306.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:651545-651668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:329285-329404:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:121059-121178:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114884-115048:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:113149-113313:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:111716-111768:-1:exon

LOC116779902
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779902
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosome-binding protein 1-like isoform X2
translation: MKEDFQELIQQVKAMREDLQKGQESSKCDIQLLRADLNKEQGKTEEGNPPKAQGSGMEETLQQLCKEMKAMREDFQKGQESKKGREAEATKPQESLMKEDFKELIQQVKAMREDLQKGQESRKTEEGNPPKAQGSGMEETLQQFCKEMKAMREDFQEGLASTKQDIQHLRADQNKEQGKTEKRNTPEAQGSGMEETLLQFCKQMKTMCEDLQKGQESTKGDIQLLKDLNKELVRNMKKMAKAQESKMDKKFQQLCQRIQTLEQELYGRQGSKQHSLQLLGAETEMEHGVLIESASEDEGFDTDA
SIO_010081: LOC116779902
subclass of: SO_0000673
so part of: LOC116779902
location: complement(join(111716..111768,113149..113313,114884..115048,118594..118761,121059..121178,329285..329404,651545..651668))
location: region:111716-651668:-1
so has part: feature:651545-651668:-1:exon
so has part: feature:329285-329404:-1:exon
so has part: feature:121059-121178:-1:exon
so has part: feature:118594-118761:-1:exon
so has part: feature:114884-115048:-1:exon
so has part: feature:113149-113313:-1:exon
so has part: feature:111716-111768:-1:exon

XP_032530298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:651545-651668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:329285-329404:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:121059-121178:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:118594-118761:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:114884-115048:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:113149-113313:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:111716-111768:-1:exon

LOC116779902
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779902
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116779902 isoform X7
translation: MKEDFQELIQQVKAMREDLQKGQESSKCDIQLLRADLNKEQGKTEEGNPPKAQGSGMEETLQQLCKEMKAMREDFQKGQESKKGREAEATKPQESLMKEDFKELIQQVKAMREDLQKGQESSKCDIQLLIEGLNKELGKTEKRNTPEAQGSGMEETLLQFCKQMKTMCEDLQKGQESTKGDIQLLKDLNKELVRNMKKMAKAQESKMDKKFQQLCQRIQTLEQELYGRQGSKQHSLQLLGAETEMEHGVLIESASEDEGFDTDA
SIO_010081: LOC116779902
subclass of: SO_0000673
so part of: LOC116779902
location: complement(join(111716..111768,113149..113313,114884..115048,121011..121178,329285..329404,651545..651668))
location: region:111716-651668:-1
so has part: feature:651545-651668:-1:exon
so has part: feature:329285-329404:-1:exon
so has part: feature:121011-121178:-1:exon
so has part: feature:114884-115048:-1:exon
so has part: feature:113149-113313:-1:exon
so has part: feature:111716-111768:-1:exon

XP_032530303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:651545-651668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:329285-329404:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:121011-121178:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114884-115048:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:113149-113313:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:111716-111768:-1:exon

LOC116779902
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779902
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116779902 isoform X8
translation: MKEDFQELIQQVKAMREDLQKGQESSKCDIQLLRADLNKEQGKTEEGNPPKAQGSGMEETLQQLCKEMKAMREDFQKGQESKKGREAEATKPQESLMKEDFKELIQQVKAMREDLQKGQESSKCDIQLLIEGLNKELGKTEEGNPPKAQGSGMEETLLQFCKQMKTMCEDLQKGQESTKGDIQLLKDLNKELVRNMKKMAKAQESKMDKKFQQLCQRIQTLEQELYGRQGSKQHSLQLLGAETEMEHGVLIESASEDEGFDTDA
SIO_010081: LOC116779902
subclass of: SO_0000673
so part of: LOC116779902
location: complement(join(111716..111768,113149..113313,114884..115019,118733..118761,121011..121178,329285..329404,651545..651668))
location: region:111716-651668:-1
so has part: feature:651545-651668:-1:exon
so has part: feature:329285-329404:-1:exon
so has part: feature:121011-121178:-1:exon
so has part: feature:118733-118761:-1:exon
so has part: feature:114884-115019:-1:exon
so has part: feature:113149-113313:-1:exon
so has part: feature:111716-111768:-1:exon

XP_032530304.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:651545-651668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:329285-329404:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:121011-121178:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:118733-118761:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:114884-115019:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:113149-113313:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:111716-111768:-1:exon

LOC116779902
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779902
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116779902 isoform X1
translation: MKEDFQELIQQVKAMREDLQKGQESSKCDIQLLRADLNKEQGKTEEGNPPKAQGSGMEETLQQLCKEMKAMREDFQKGQESKKGREAEATKPQESLMKEDFKELIQQVKAMREDLQKGQESSKCDIQLLIEGLNKELGKTEEGNPPKAQGSGMEETLQQFCKEMKAMREDFQEGLASTKQDIQHLRADQNKEQGKTEKRNTPEAQGSGMEETLLQFCKQMKTMCEDLQKGQESTKGDIQLLKDLNKELVRNMKKMAKAQESKMDKKFQQLCQRIQTLEQELYGRQGSKQHSLQLLGAETEMEHGVLIESASEDEGFDTDA
SIO_010081: LOC116779902
subclass of: SO_0000673
so part of: LOC116779902
location: complement(join(111716..111768,113149..113313,114884..115048,118594..118761,121011..121178,329285..329404,651545..651668))
location: region:111716-651668:-1
so has part: feature:651545-651668:-1:exon
so has part: feature:329285-329404:-1:exon
so has part: feature:121011-121178:-1:exon
so has part: feature:118594-118761:-1:exon
so has part: feature:114884-115048:-1:exon
so has part: feature:113149-113313:-1:exon
so has part: feature:111716-111768:-1:exon

XP_032530297.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:651545-651668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:329285-329404:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:121011-121178:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:118594-118761:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:114884-115048:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:113149-113313:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:111716-111768:-1:exon

LOC116779902
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779902
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116779902 isoform X3
translation: MPGEPRQGSSRREVSSVAAASVIKYSGAAQELDGRVNPEKRIWERRSMGVFETFEKGREAEATKPQESLMKEDFKELIQQVKAMREDLQKGQESSKCDIQLLIEGLNKELGKTEEGNPPKAQGSGMEETLQQFCKEMKAMREDFQEGLASTKQDIQHLRADQNKEQGKTEKRNTPEAQGSGMEETLLQFCKQMKTMCEDLQKGQESTKGDIQLLKDLNKELVRNMKKMAKAQESKMDKKFQQLCQRIQTLEQELYGRQGSKQHSLQLLGAETEMEHGVLIESASEDEGFDTDA
SIO_010081: LOC116779902
subclass of: SO_0000673
so part of: LOC116779902
location: complement(join(111716..111768,113149..113313,114884..115048,118594..118761,121011..121178,336135..336193,337063..337166))
location: region:111716-337166:-1
so has part: feature:337063-337166:-1:exon
so has part: feature:336135-336193:-1:exon
so has part: feature:121011-121178:-1:exon
so has part: feature:118594-118761:-1:exon
so has part: feature:114884-115048:-1:exon
so has part: feature:113149-113313:-1:exon
so has part: feature:111716-111768:-1:exon

XP_032530299.1
type: Protein
SIO_000068: ncbiprotein

position:337166:-1
position: 337166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337063-337166:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:336135-336193:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:121011-121178:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:118594-118761:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:114884-115048:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:113149-113313:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:111716-111768:-1:exon

LOC116779902
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779902
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116779902 isoform X5
translation: MPGEPRQGSSRREVSLVAAASVIKYSGAAQELDGRVNLEKRTWKRRSMGVFATVEKGREAEATKPQESLMKEDFKELIQQVKAMREDLQKGQESRKTEEGNPPKAQGSGMEETLQQFCKEMKAMREDFQEGLASTKQDIQHLRADQNKEQGKTEKRNTPEAQGSGMEETLLQFCKQMKTMCEDLQKGQESTKGDIQLLKDLNKELVRNMKKMAKAQESKMDKKFQQLCQRIQTLEQELYGRQGSKQHSLQLLGAETEMEHGVLIESASEDEGFDTDA
SIO_010081: LOC116779902
subclass of: SO_0000673
so part of: LOC116779902
location: complement(join(111716..111768,113149..113313,114884..115048,118594..118761,121059..121178,123345..123403,124294..124397))
location: region:111716-124397:-1
so has part: feature:124294-124397:-1:exon
so has part: feature:123345-123403:-1:exon
so has part: feature:121059-121178:-1:exon
so has part: feature:118594-118761:-1:exon
so has part: feature:114884-115048:-1:exon
so has part: feature:113149-113313:-1:exon
so has part: feature:111716-111768:-1:exon

XP_032530301.1
type: Protein
SIO_000068: ncbiprotein

position:124397:-1
position: 124397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124294-124397:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:123345-123403:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:121059-121178:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:118594-118761:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:114884-115048:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:113149-113313:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:111716-111768:-1:exon

LOC116779902
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779902
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116779902 isoform X4
translation: MPGEPRQGSSRREVSLVAAASVIKYSGAAQELDGRVNLEKRTWKRRSMGVFATVEKGREAEATKPQESLMKEDFKELIQQVKAMREDLQKGQESSKCDIQLLIEGLNKELGKTEEGNPPKAQGSGMEETLQQFCKEMKAMREDFQEGLASTKQDIQHLRADQNKEQGKTEKRNTPEAQGSGMEETLLQFCKQMKTMCEDLQKGQESTKGDIQLLKDLNKELVRNMKKMAKAQESKMDKKFQQLCQRIQTLEQELYGRQGSKQHSLQLLGAETEMEHGVLIESASEDEGFDTDA
SIO_010081: LOC116779902
subclass of: SO_0000673
so part of: LOC116779902
location: complement(join(111716..111768,113149..113313,114884..115048,118594..118761,121011..121178,123345..123403,124294..124397))
location: region:111716-124397:-1
so has part: feature:124294-124397:-1:exon
so has part: feature:123345-123403:-1:exon
so has part: feature:121011-121178:-1:exon
so has part: feature:118594-118761:-1:exon
so has part: feature:114884-115048:-1:exon
so has part: feature:113149-113313:-1:exon
so has part: feature:111716-111768:-1:exon

XP_032530300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124294-124397:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:123345-123403:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:121011-121178:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:118594-118761:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:114884-115048:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:113149-113313:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:111716-111768:-1:exon

LOC116779913
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779913
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 181283..199273
location: region:181283-199273:1
so has part: feature:181283-199273:1:exon
subclass of: SO_0000011

116779913
type: Gene
SIO_000068: ncbigene

position:181283:1
position: 181283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199273:1
position: 199273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181283-199273:1:exon

LOC116779913
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116779913
product: uncharacterized LOC116779913
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004354249.1
SIO_010081: LOC116779913
subclass of: SO_0000673
so part of: LOC116779913
location: join(181283..181348,181807..181909,199262..199273)
location: region:181283-199273:1
so has part: feature:181283-181348:1:exon
so has part: feature:181807-181909:1:exon
so has part: feature:199262-199273:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:181283-181348:1:exon

position:181348:1
position: 181348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:181807-181909:1:exon

position:181807:1
position: 181807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181909:1
position: 181909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:199262-199273:1:exon

position:199262:1
position: 199262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116779909
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779909
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(194979..200203)
location: region:194979-200203:-1
so has part: feature:194979-200203:-1:exon
subclass of: SO_0000011

116779909
type: Gene
SIO_000068: ncbigene

position:194979:-1
position: 194979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200203:-1
position: 200203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194979-200203:-1:exon

LOC116779909
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116779909
product: uncharacterized LOC116779909, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004354243.1
SIO_010081: LOC116779909
subclass of: SO_0000673
so part of: LOC116779909
location: complement(join(194979..195114,195207..195276,195459..195497,195622..195657,196668..196768,199981..200203))
location: region:194979-200203:-1
so has part: feature:199981-200203:-1:exon
so has part: feature:196668-196768:-1:exon
so has part: feature:195622-195657:-1:exon
so has part: feature:195459-195497:-1:exon
so has part: feature:195207-195276:-1:exon
so has part: feature:194979-195114:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:199981-200203:-1:exon

position:199981:-1
position: 199981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:196668-196768:-1:exon

position:196668:-1
position: 196668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196768:-1
position: 196768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:195622-195657:-1:exon

position:195622:-1
position: 195622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195657:-1
position: 195657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:195459-195497:-1:exon

position:195459:-1
position: 195459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195497:-1
position: 195497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:195207-195276:-1:exon

position:195207:-1
position: 195207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195276:-1
position: 195276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:194979-195114:-1:exon

position:195114:-1
position: 195114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116779909
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116779909
product: uncharacterized LOC116779909, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004354244.1
SIO_010081: LOC116779909
subclass of: SO_0000673
so part of: LOC116779909
location: complement(join(194979..195114,195207..195276,195622..196108))
location: region:194979-196108:-1
so has part: feature:195622-196108:-1:exon
so has part: feature:195207-195276:-1:exon
so has part: feature:194979-195114:-1:exon

position:196108:-1
position: 196108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195622-196108:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:195207-195276:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194979-195114:-1:exon

LOC116779909
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116779909
product: uncharacterized LOC116779909, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004354242.1
SIO_010081: LOC116779909
subclass of: SO_0000673
so part of: LOC116779909
location: complement(join(194979..195114,195207..195276,195459..195497,195622..196108))
location: region:194979-196108:-1
so has part: feature:195622-196108:-1:exon
so has part: feature:195459-195497:-1:exon
so has part: feature:195207-195276:-1:exon
so has part: feature:194979-195114:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:195622-196108:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:195459-195497:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195207-195276:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:194979-195114:-1:exon

LOC116779900
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779900
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(248354..249441)
location: region:248354-249441:-1
so has part: feature:248354-249441:-1:exon
subclass of: SO_0000010

116779900
type: Gene
SIO_000068: ncbigene

position:248354:-1
position: 248354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249441:-1
position: 249441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248354-249441:-1:exon

LOC116779900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779900
product: olfactory receptor 6F1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674403.1
SIO_010081: LOC116779900
subclass of: SO_0000673
so part of: LOC116779900
location: complement(248354..249441)
location: region:248354-249441:-1
so has part: feature:248354-249441:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:248354-249441:-1:exon

LOC116779900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779900
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 6F1-like
translation: MFLSRQDELKFSMGAANETAVTEFILEGFPGLDQSLQLFLSVILLLMYLTTVTGNATIIFLVCVDHHLQTPMYFFISNLAFLEIWFTSSTSIKLFAILSSDQKTISLSSCFAQSYFYFALGCTEFVLLVVMAFDRWVAICQPLHYAATMEPQLCLCLVVAAWLIGFTLLSYRLLFLSQLSFCGSNRIPHFLCDNSPLFKLSCSDTNLLWKIDSVFLSCVVLGSLCLTLAFYTCILFCILRLPAASGRKKAFTTCSSHLITLSIVYGSCIALYMCPSADVSLKTNRIVALLNTVLYPFLNPFIYSLRNKAVILALNKSIATTITKLFP
SIO_010081: LOC116779900
subclass of: SO_0000673
so part of: LOC116779900
location: complement(248420..249403)
location: region:248420-249403:-1
so has part: feature:248420-249403:-1:exon

XP_032530294.1
type: Protein
SIO_000068: ncbiprotein

position:248420:-1
position: 248420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249403:-1
position: 249403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248420-249403:-1:exon

LOC116779915
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779915
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 286685..294958
location: region:286685-294958:1
so has part: feature:286685-294958:1:exon
subclass of: SO_0000011

116779915
type: Gene
SIO_000068: ncbigene

position:286685:1
position: 286685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294958:1
position: 294958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286685-294958:1:exon

LOC116779915
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116779915
product: uncharacterized LOC116779915
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004354251.1
SIO_010081: LOC116779915
subclass of: SO_0000673
so part of: LOC116779915
location: join(286685..286696,292265..292274,294699..294958)
location: region:286685-294958:1
so has part: feature:286685-286696:1:exon
so has part: feature:292265-292274:1:exon
so has part: feature:294699-294958:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:286685-286696:1:exon

position:286696:1
position: 286696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:292265-292274:1:exon

position:292265:1
position: 292265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292274:1
position: 292274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:294699-294958:1:exon

position:294699:1
position: 294699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116779916
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779916
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(287027..306149)
location: region:287027-306149:-1
so has part: feature:287027-306149:-1:exon
subclass of: SO_0000011

116779916
type: Gene
SIO_000068: ncbigene

position:287027:-1
position: 287027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306149:-1
position: 306149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287027-306149:-1:exon

LOC116779916
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116779916
product: uncharacterized LOC116779916
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004354252.1
SIO_010081: LOC116779916
subclass of: SO_0000673
so part of: LOC116779916
location: complement(join(287027..287102,291039..291047,306139..306149))
location: region:287027-306149:-1
so has part: feature:306139-306149:-1:exon
so has part: feature:291039-291047:-1:exon
so has part: feature:287027-287102:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:306139-306149:-1:exon

position:306139:-1
position: 306139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:291039-291047:-1:exon

position:291039:-1
position: 291039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291047:-1
position: 291047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:287027-287102:-1:exon

position:287102:-1
position: 287102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116779904
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779904
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 342876..480679
location: region:342876-480679:1
so has part: feature:342876-480679:1:exon
subclass of: SO_0000010

116779904
type: Gene
SIO_000068: ncbigene

position:342876:1
position: 342876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480679:1
position: 480679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342876-480679:1:exon

LOC116779904
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779904
product: uncharacterized LOC116779904, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032674423.1
SIO_010081: LOC116779904
subclass of: SO_0000673
so part of: LOC116779904
location: join(342876..343049,346606..346770,478587..478751,480127..480679)
location: region:342876-480679:1
so has part: feature:342876-343049:1:exon
so has part: feature:346606-346770:1:exon
so has part: feature:478587-478751:1:exon
so has part: feature:480127-480679:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:342876-343049:1:exon

position:343049:1
position: 343049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:346606-346770:1:exon

position:346606:1
position: 346606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346770:1
position: 346770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:478587-478751:1:exon

position:478587:1
position: 478587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478751:1
position: 478751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:480127-480679:1:exon

position:480127:1
position: 480127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116779904
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779904
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116779904 isoform X5
translation: MEETLQQFCKEMKAMREDFQEGLASTKQDIQHLRADLNKELGKTEKRNTPEAQGSAMEETLLQFCKQMKTMCEDLQKGQESTKGDIQLLKDLNKELDRKMKKMAKAQESKMDKEFQQLRQRIQTLEQELHGRQGSKQHSLQLLGAETEMEHGVLIESASEDEGSDTDA
SIO_010081: LOC116779904
subclass of: SO_0000673
so part of: LOC116779904
location: join(342926..343049,346606..346770,478587..478751,480127..480179)
location: region:342926-480179:1
so has part: feature:342926-343049:1:exon
so has part: feature:346606-346770:1:exon
so has part: feature:478587-478751:1:exon
so has part: feature:480127-480179:1:exon

XP_032530314.1
type: Protein
SIO_000068: ncbiprotein

position:342926:1
position: 342926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480179:1
position: 480179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342926-343049:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:346606-346770:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:478587-478751:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:480127-480179:1:exon

LOC116779903
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779903
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(400701..401648)
location: region:400701-401648:-1
so has part: feature:400701-401648:-1:exon
subclass of: SO_0000010

116779903
type: Gene
SIO_000068: ncbigene

position:400701:-1
position: 400701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401648:-1
position: 401648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400701-401648:-1:exon

LOC116779903
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779903
product: olfactory receptor 6F1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674416.1
SIO_010081: LOC116779903
subclass of: SO_0000673
so part of: LOC116779903
location: complement(400701..401648)
location: region:400701-401648:-1
so has part: feature:400701-401648:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:400701-401648:-1:exon

LOC116779903
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779903
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 6F1-like
translation: MGAANETAVTEFILEGFPGLDQSLQLFLSVILLLMYLTTVTGNATIIFLVCVDHHLQTPMYFFISNLAFLEIWFTSSTSIKLFAILSSDQKTISLSSCFAQSYFYFALGCTEFVLLVVMAFDRWVAICQPLHYAATMEPQLCLCLVVAAWLIGFTLLSYRLLFLSQLSFCGSNRIPHFLCDNSPLFKLSCSDTSLLWKIDSVFISCVVLGSLCLTLAFYTCILFCILQLPAASGRKKAFTTCSSHLITLSIVYGSCIALYMCPSADVSLKTNRIVALLNTVLYPFLNPFIYSLRNKAVILALNKSIATTITKLFP
SIO_010081: LOC116779903
subclass of: SO_0000673
so part of: LOC116779903
location: complement(400701..401648)
location: region:400701-401648:-1
so has part: feature:400701-401648:-1:exon

XP_032530307.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:400701-401648:-1:exon

LOC116779911
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779911
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(425535..427200)
location: region:425535-427200:-1
so has part: feature:425535-427200:-1:exon
subclass of: SO_0000011

116779911
type: Gene
SIO_000068: ncbigene

position:425535:-1
position: 425535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427200:-1
position: 427200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425535-427200:-1:exon

LOC116779911
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116779911
product: uncharacterized LOC116779911, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004354246.1
SIO_010081: LOC116779911
subclass of: SO_0000673
so part of: LOC116779911
location: complement(join(425535..425653,426043..426145,427148..427200))
location: region:425535-427200:-1
so has part: feature:427148-427200:-1:exon
so has part: feature:426043-426145:-1:exon
so has part: feature:425535-425653:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:427148-427200:-1:exon

position:427148:-1
position: 427148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:426043-426145:-1:exon

position:426043:-1
position: 426043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426145:-1
position: 426145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:425535-425653:-1:exon

position:425653:-1
position: 425653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116779911
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116779911
product: uncharacterized LOC116779911, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004354247.1
SIO_010081: LOC116779911
subclass of: SO_0000673
so part of: LOC116779911
location: complement(join(425535..425653,426043..426145,426871..426883))
location: region:425535-426883:-1
so has part: feature:426871-426883:-1:exon
so has part: feature:426043-426145:-1:exon
so has part: feature:425535-425653:-1:exon

position:426883:-1
position: 426883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426871-426883:-1:exon

position:426871:-1
position: 426871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:426043-426145:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:425535-425653:-1:exon

LOC116779904
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779904
product: uncharacterized LOC116779904, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032674422.1
SIO_010081: LOC116779904
subclass of: SO_0000673
so part of: LOC116779904
location: join(462923..463049,473233..473294,473995..474060,475463..475630,478587..478751,480127..480679)
location: region:462923-480679:1
so has part: feature:462923-463049:1:exon
so has part: feature:473233-473294:1:exon
so has part: feature:473995-474060:1:exon
so has part: feature:475463-475630:1:exon
so has part: feature:478587-478751:1:exon
so has part: feature:480127-480679:1:exon

position:462923:1
position: 462923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462923-463049:1:exon

position:463049:1
position: 463049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:473233-473294:1:exon

position:473233:1
position: 473233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473294:1
position: 473294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:473995-474060:1:exon

position:473995:1
position: 473995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474060:1
position: 474060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:475463-475630:1:exon

position:475463:1
position: 475463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475630:1
position: 475630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:478587-478751:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:480127-480679:1:exon

LOC116779904
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779904
product: uncharacterized LOC116779904, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032674418.1
SIO_010081: LOC116779904
subclass of: SO_0000673
so part of: LOC116779904
location: join(462931..463047,465606..465735,473236..473294,473995..474060,475463..475630,478587..478751,480127..480679)
location: region:462931-480679:1
so has part: feature:462931-463047:1:exon
so has part: feature:465606-465735:1:exon
so has part: feature:473236-473294:1:exon
so has part: feature:473995-474060:1:exon
so has part: feature:475463-475630:1:exon
so has part: feature:478587-478751:1:exon
so has part: feature:480127-480679:1:exon

position:462931:1
position: 462931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462931-463047:1:exon

position:463047:1
position: 463047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:465606-465735:1:exon

position:465606:1
position: 465606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465735:1
position: 465735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:473236-473294:1:exon

position:473236:1
position: 473236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:473995-474060:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:475463-475630:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:478587-478751:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:480127-480679:1:exon

LOC116779904
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779904
product: uncharacterized LOC116779904, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032674417.1
SIO_010081: LOC116779904
subclass of: SO_0000673
so part of: LOC116779904
location: join(464148..464277,465611..465735,473236..473294,473995..474060,475463..475630,478587..478751,480127..480679)
location: region:464148-480679:1
so has part: feature:464148-464277:1:exon
so has part: feature:465611-465735:1:exon
so has part: feature:473236-473294:1:exon
so has part: feature:473995-474060:1:exon
so has part: feature:475463-475630:1:exon
so has part: feature:478587-478751:1:exon
so has part: feature:480127-480679:1:exon

position:464148:1
position: 464148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464148-464277:1:exon

position:464277:1
position: 464277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:465611-465735:1:exon

position:465611:1
position: 465611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:473236-473294:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:473995-474060:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:475463-475630:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:478587-478751:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:480127-480679:1:exon

LOC116779904
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779904
product: uncharacterized LOC116779904, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032674420.1
SIO_010081: LOC116779904
subclass of: SO_0000673
so part of: LOC116779904
location: join(464148..464277,465611..465735,473236..473294,473995..474060,475463..475630,478587..478688,480127..480679)
location: region:464148-480679:1
so has part: feature:464148-464277:1:exon
so has part: feature:465611-465735:1:exon
so has part: feature:473236-473294:1:exon
so has part: feature:473995-474060:1:exon
so has part: feature:475463-475630:1:exon
so has part: feature:478587-478688:1:exon
so has part: feature:480127-480679:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:464148-464277:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:465611-465735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:473236-473294:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:473995-474060:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:475463-475630:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:478587-478688:1:exon

position:478688:1
position: 478688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:480127-480679:1:exon

LOC116779904
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779904
product: uncharacterized LOC116779904, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032674419.1
SIO_010081: LOC116779904
subclass of: SO_0000673
so part of: LOC116779904
location: join(464148..464277,465611..465735,473236..473294,473995..474054,475463..475630,478587..478751,480127..480679)
location: region:464148-480679:1
so has part: feature:464148-464277:1:exon
so has part: feature:465611-465735:1:exon
so has part: feature:473236-473294:1:exon
so has part: feature:473995-474054:1:exon
so has part: feature:475463-475630:1:exon
so has part: feature:478587-478751:1:exon
so has part: feature:480127-480679:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:464148-464277:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:465611-465735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:473236-473294:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:473995-474054:1:exon

position:474054:1
position: 474054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:475463-475630:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:478587-478751:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:480127-480679:1:exon

LOC116779904
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779904
product: uncharacterized LOC116779904, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032674421.1
SIO_010081: LOC116779904
subclass of: SO_0000673
so part of: LOC116779904
location: join(464148..464277,473236..473294,473995..474060,475463..475630,478587..478751,480127..480679)
location: region:464148-480679:1
so has part: feature:464148-464277:1:exon
so has part: feature:473236-473294:1:exon
so has part: feature:473995-474060:1:exon
so has part: feature:475463-475630:1:exon
so has part: feature:478587-478751:1:exon
so has part: feature:480127-480679:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:464148-464277:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:473236-473294:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:473995-474060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:475463-475630:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:478587-478751:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:480127-480679:1:exon

LOC116779904
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779904
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116779904 isoform X1
translation: MPGEPRQGSSRREVSSVAAASVIKYSGVAQELDGRMNPEKRTWDRRGMEFLGGAAATVGVKLVEKFIDEAFERGSKKKGWEPEASKPQESWMKEDFQKLIQEMKAMREDLQKRQEYTNWLFQLLREDLNKEQDRKMKKMAKAQESKMDKEFQQLRQRIQTLEQELHGRQGSKQHSLQLLGAETEMEHGVLIESASEDEGSDTDA
SIO_010081: LOC116779904
subclass of: SO_0000673
so part of: LOC116779904
location: join(465632..465735,473236..473294,473995..474060,475463..475630,478587..478751,480127..480179)
location: region:465632-480179:1
so has part: feature:465632-465735:1:exon
so has part: feature:473236-473294:1:exon
so has part: feature:473995-474060:1:exon
so has part: feature:475463-475630:1:exon
so has part: feature:478587-478751:1:exon
so has part: feature:480127-480179:1:exon

XP_032530308.1
type: Protein
SIO_000068: ncbiprotein

position:465632:1
position: 465632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465632-465735:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:473236-473294:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:473995-474060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:475463-475630:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:478587-478751:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:480127-480179:1:exon

LOC116779904
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779904
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116779904 isoform X1
translation: MPGEPRQGSSRREVSSVAAASVIKYSGVAQELDGRMNPEKRTWDRRGMEFLGGAAATVGVKLVEKFIDEAFERGSKKKGWEPEASKPQESWMKEDFQKLIQEMKAMREDLQKRQEYTNWLFQLLREDLNKEQDRKMKKMAKAQESKMDKEFQQLRQRIQTLEQELHGRQGSKQHSLQLLGAETEMEHGVLIESASEDEGSDTDA
SIO_010081: LOC116779904
subclass of: SO_0000673
so part of: LOC116779904
location: join(465632..465735,473236..473294,473995..474060,475463..475630,478587..478751,480127..480179)
location: region:465632-480179:1
so has part: feature:465632-465735:1:exon
so has part: feature:473236-473294:1:exon
so has part: feature:473995-474060:1:exon
so has part: feature:475463-475630:1:exon
so has part: feature:478587-478751:1:exon
so has part: feature:480127-480179:1:exon

XP_032530309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:465632-465735:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:473236-473294:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:473995-474060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:475463-475630:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:478587-478751:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:480127-480179:1:exon

LOC116779904
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779904
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116779904 isoform X3
translation: MPGEPRQGSSRREVSSVAAASVIKYSGVAQELDGRMNPEKRTWDRRGMEFLGGAAATVGVKLVEKFIDEAFERGSKKKGWEPEASKPQESWMKEDFQKLIQEMKAMREDLQKRQEYTNWLFQLLREDLNKEQDRKMKKMAKAQESKMDKEFQQLRQRIQTLEQELHGVLIESASEDEGSDTDA
SIO_010081: LOC116779904
subclass of: SO_0000673
so part of: LOC116779904
location: join(465632..465735,473236..473294,473995..474060,475463..475630,478587..478688,480127..480179)
location: region:465632-480179:1
so has part: feature:465632-465735:1:exon
so has part: feature:473236-473294:1:exon
so has part: feature:473995-474060:1:exon
so has part: feature:475463-475630:1:exon
so has part: feature:478587-478688:1:exon
so has part: feature:480127-480179:1:exon

XP_032530311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:465632-465735:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:473236-473294:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:473995-474060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:475463-475630:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:478587-478688:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:480127-480179:1:exon

LOC116779904
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779904
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116779904 isoform X2
translation: MPGEPRQGSSRREVSSVAAASVIKYSGVAQELDGRMNPEKRTWDRRGMEFLGGAAATVGVKLVEKFIDEAFERGKKGWEPEASKPQESWMKEDFQKLIQEMKAMREDLQKRQEYTNWLFQLLREDLNKEQDRKMKKMAKAQESKMDKEFQQLRQRIQTLEQELHGRQGSKQHSLQLLGAETEMEHGVLIESASEDEGSDTDA
SIO_010081: LOC116779904
subclass of: SO_0000673
so part of: LOC116779904
location: join(465632..465735,473236..473294,473995..474054,475463..475630,478587..478751,480127..480179)
location: region:465632-480179:1
so has part: feature:465632-465735:1:exon
so has part: feature:473236-473294:1:exon
so has part: feature:473995-474054:1:exon
so has part: feature:475463-475630:1:exon
so has part: feature:478587-478751:1:exon
so has part: feature:480127-480179:1:exon

XP_032530310.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:465632-465735:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:473236-473294:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:473995-474054:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:475463-475630:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:478587-478751:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:480127-480179:1:exon

LOC116779904
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779904
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116779904 isoform X4
translation: MNPEKRTWDRRGMEFLGGAAATVGVKLVEKFIDEAFERGSKKKGWEPEASKPQESWMKEDFQKLIQEMKAMREDLQKRQEYTNWLFQLLREDLNKEQDRKMKKMAKAQESKMDKEFQQLRQRIQTLEQELHGRQGSKQHSLQLLGAETEMEHGVLIESASEDEGSDTDA
SIO_010081: LOC116779904
subclass of: SO_0000673
so part of: LOC116779904
location: join(473237..473294,473995..474060,475463..475630,478587..478751,480127..480179)
location: region:473237-480179:1
so has part: feature:473237-473294:1:exon
so has part: feature:473995-474060:1:exon
so has part: feature:475463-475630:1:exon
so has part: feature:478587-478751:1:exon
so has part: feature:480127-480179:1:exon

XP_032530312.1
type: Protein
SIO_000068: ncbiprotein

position:473237:1
position: 473237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473237-473294:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:473995-474060:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:475463-475630:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:478587-478751:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:480127-480179:1:exon

LOC116779904
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779904
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116779904 isoform X4
translation: MNPEKRTWDRRGMEFLGGAAATVGVKLVEKFIDEAFERGSKKKGWEPEASKPQESWMKEDFQKLIQEMKAMREDLQKRQEYTNWLFQLLREDLNKEQDRKMKKMAKAQESKMDKEFQQLRQRIQTLEQELHGRQGSKQHSLQLLGAETEMEHGVLIESASEDEGSDTDA
SIO_010081: LOC116779904
subclass of: SO_0000673
so part of: LOC116779904
location: join(473237..473294,473995..474060,475463..475630,478587..478751,480127..480179)
location: region:473237-480179:1
so has part: feature:473237-473294:1:exon
so has part: feature:473995-474060:1:exon
so has part: feature:475463-475630:1:exon
so has part: feature:478587-478751:1:exon
so has part: feature:480127-480179:1:exon

XP_032530313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:473237-473294:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:473995-474060:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:475463-475630:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:478587-478751:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:480127-480179:1:exon

LOC116779914
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779914
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(542811..545033)
location: region:542811-545033:-1
so has part: feature:542811-545033:-1:exon
subclass of: SO_0000011

116779914
type: Gene
SIO_000068: ncbigene

position:542811:-1
position: 542811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545033:-1
position: 545033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:542811-545033:-1:exon

LOC116779914
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116779914
product: uncharacterized LOC116779914
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004354250.1
SIO_010081: LOC116779914
subclass of: SO_0000673
so part of: LOC116779914
location: complement(join(542811..542942,544118..544331,544994..545033))
location: region:542811-545033:-1
so has part: feature:544994-545033:-1:exon
so has part: feature:544118-544331:-1:exon
so has part: feature:542811-542942:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:544994-545033:-1:exon

position:544994:-1
position: 544994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:544118-544331:-1:exon

position:544118:-1
position: 544118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544331:-1
position: 544331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:542811-542942:-1:exon

position:542942:-1
position: 542942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116779897
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779897
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 552162..556097
location: region:552162-556097:1
so has part: feature:552162-556097:1:exon
subclass of: SO_0000010

116779897
type: Gene
SIO_000068: ncbigene

position:552162:1
position: 552162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556097:1
position: 556097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552162-556097:1:exon

LOC116779897
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779897
product: trypsin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674394.1
SIO_010081: LOC116779897
subclass of: SO_0000673
so part of: LOC116779897
location: join(552162..552204,553149..553299,553932..554227,554477..554613,555583..556097)
location: region:552162-556097:1
so has part: feature:552162-552204:1:exon
so has part: feature:553149-553299:1:exon
so has part: feature:553932-554227:1:exon
so has part: feature:554477-554613:1:exon
so has part: feature:555583-556097:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:552162-552204:1:exon

position:552204:1
position: 552204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:553149-553299:1:exon

position:553149:1
position: 553149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553299:1
position: 553299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:553932-554227:1:exon

position:553932:1
position: 553932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554227:1
position: 554227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:554477-554613:1:exon

position:554477:1
position: 554477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554613:1
position: 554613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:555583-556097:1:exon

position:555583:1
position: 555583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116779897
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779897
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trypsin-like
translation: MGILLFLLLLGATPARGSRRIVGGSECPRGSHPALVALFQFDQFVCGGVLLTPQWVLSAAHCATSPLQVQAGGHSLSQPSGHEQFAAVAELVPHPEFQGGGDPGFQRDGDPGFQNRSHDLLLLRVEPPFTWTPLVQPLPLPEDPPDPGENCTAMGWGSTGGELDSYPDVPQCVTVAVLGDTECQVSYGPQVTEDMLCAGVPEGGKDSCQGDSGGPLVCQGLLQGIVSWGEHPCGQPGRPGVYASVQWHLQWILGVIGGAETP
SIO_010081: LOC116779897
subclass of: SO_0000673
so part of: LOC116779897
location: join(552162..552204,553149..553299,553932..554227,554477..554613,555583..555744)
location: region:552162-555744:1
so has part: feature:552162-552204:1:exon
so has part: feature:553149-553299:1:exon
so has part: feature:553932-554227:1:exon
so has part: feature:554477-554613:1:exon
so has part: feature:555583-555744:1:exon

XP_032530285.1
type: Protein
SIO_000068: ncbiprotein

position:555744:1
position: 555744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552162-552204:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:553149-553299:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:553932-554227:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:554477-554613:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:555583-555744:1:exon

LOC116779898
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779898
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(561860..568683)
location: region:561860-568683:-1
so has part: feature:561860-568683:-1:exon
subclass of: SO_0000010

116779898
type: Gene
SIO_000068: ncbigene

position:561860:-1
position: 561860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568683:-1
position: 568683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:561860-568683:-1:exon

LOC116779898
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779898
product: transcriptional regulator ovo-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032674400.1
SIO_010081: LOC116779898
subclass of: SO_0000673
so part of: LOC116779898
location: complement(join(561860..562623,562693..564112,568230..568683))
location: region:561860-568683:-1
so has part: feature:568230-568683:-1:exon
so has part: feature:562693-564112:-1:exon
so has part: feature:561860-562623:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:568230-568683:-1:exon

position:568230:-1
position: 568230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:562693-564112:-1:exon

position:562693:-1
position: 562693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564112:-1
position: 564112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:561860-562623:-1:exon

position:562623:-1
position: 562623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116779898
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779898
product: transcriptional regulator ovo-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032674397.1
SIO_010081: LOC116779898
subclass of: SO_0000673
so part of: LOC116779898
location: complement(join(561860..562623,562693..563670,563797..564112,564925..565434,568230..568683))
location: region:561860-568683:-1
so has part: feature:568230-568683:-1:exon
so has part: feature:564925-565434:-1:exon
so has part: feature:563797-564112:-1:exon
so has part: feature:562693-563670:-1:exon
so has part: feature:561860-562623:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:568230-568683:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564925-565434:-1:exon

position:564925:-1
position: 564925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565434:-1
position: 565434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:563797-564112:-1:exon

position:563797:-1
position: 563797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:562693-563670:-1:exon

position:563670:-1
position: 563670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:561860-562623:-1:exon

LOC116779898
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779898
product: transcriptional regulator ovo-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032674399.1
SIO_010081: LOC116779898
subclass of: SO_0000673
so part of: LOC116779898
location: complement(join(561860..562623,562693..563540,563730..564112,564925..565434,568230..568683))
location: region:561860-568683:-1
so has part: feature:568230-568683:-1:exon
so has part: feature:564925-565434:-1:exon
so has part: feature:563730-564112:-1:exon
so has part: feature:562693-563540:-1:exon
so has part: feature:561860-562623:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:568230-568683:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564925-565434:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:563730-564112:-1:exon

position:563730:-1
position: 563730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:562693-563540:-1:exon

position:563540:-1
position: 563540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:561860-562623:-1:exon

LOC116779898
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779898
product: transcriptional regulator ovo-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032674396.1
SIO_010081: LOC116779898
subclass of: SO_0000673
so part of: LOC116779898
location: complement(join(561860..562623,562693..564112,564925..565434,568230..568683))
location: region:561860-568683:-1
so has part: feature:568230-568683:-1:exon
so has part: feature:564925-565434:-1:exon
so has part: feature:562693-564112:-1:exon
so has part: feature:561860-562623:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:568230-568683:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564925-565434:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:562693-564112:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:561860-562623:-1:exon

LOC116779898
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779898
product: transcriptional regulator ovo-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032674398.1
SIO_010081: LOC116779898
subclass of: SO_0000673
so part of: LOC116779898
location: complement(join(561860..562464,562669..564112,564925..565434,568230..568683))
location: region:561860-568683:-1
so has part: feature:568230-568683:-1:exon
so has part: feature:564925-565434:-1:exon
so has part: feature:562669-564112:-1:exon
so has part: feature:561860-562464:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:568230-568683:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564925-565434:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:562669-564112:-1:exon

position:562669:-1
position: 562669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:561860-562464:-1:exon

position:562464:-1
position: 562464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116779898
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779898
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcriptional regulator ovo-like isoform X5
translation: MKTRPFPPNHAPFRQTAPFSVKTRPSTSSASRLRPAPEFGAAAPLNFRCGRDLNHPRVTPLFALIGYTDPEVARRRGYTQKSRVDWSIRGGAGLRMGEKAPIGRLRWAWPEYARGTAGKVRGGPGRAKPTEGHNADDVAETVLMNFLRGDVARLRRAANEATGATNEATAATSEFSRATNEAIGANEATGATNEATGATNKANEADEATGTTKKEPNRNPTEPNDNSSESNGNSTEPSDNSSELNGNPTEPNDNSSEPNGNSSEPNNNSMEPNDNSSELNDNLSEPNRNPTKLNRNPVEPNRNPVEPNDNPMEPNHDSLEPKRNPTKFDRNSMQPNDNSSELKGNLRNSNGNPTKFNRNPRKPTQTPPQPNATRPAVPRLKPLRHAAQREIVLYAHFLGLSYASSECHHAPLAFRGHPRALLKDLEAARPAAVAALAHSGHRLALGAAPGAGEPPGACGRCGSVASGDLCMACALLAALDKGRPRLALGKRGVRVATGADRQWEGEGGEQGGHWDGPCGGHGVGGPGDGSGGHQEGGDGHWDGSGGHGVEGPGNGGGGRQEGGGGQGATGCEGGGRGGSSGGHGGCGCRAGGPGAGGQAGGHGGCSGGHGGGSGGHGGCGCRGGGPRADGQAGGHGGNSGCHGGSFGGHGVCGHRVAFGDPLGREVQVEVVSRGGRSERRCLRGFGHIRGGLDIWDF
SIO_010081: LOC116779898
subclass of: SO_0000673
so part of: LOC116779898
location: complement(join(562344..562623,562693..564112,568230..568623))
location: region:562344-568623:-1
so has part: feature:568230-568623:-1:exon
so has part: feature:562693-564112:-1:exon
so has part: feature:562344-562623:-1:exon

XP_032530291.1
type: Protein
SIO_000068: ncbiprotein

position:562344:-1
position: 562344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568623:-1
position: 568623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:568230-568623:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:562693-564112:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:562344-562623:-1:exon

LOC116779898
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779898
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116779898 isoform X2
translation: MKTRPFPPNHAPFRQTAPFSVKTRPSTSSASRLRPAPEFGAAAPLNFRCGRDLNHPRVTPLFALIGYTDPEVARRRGYTQKSRVDWSIRGGAGLRMGEKAPIGRLRWAWPEYARGTAGKVRGGPGRAKPTEGPAMPPPRCSRCPNPSSLLRSRSLLPFCRHCFVAAFEAETLRALLGDPSGTPKPGQGVAVAASGGKDSTVLAHVLSQLDRCHNLGLKLALLAVDEGISGYREPSLVALREVALALPLPLLVVEHRELFGLTVDQAGPALGGRSRCTLCGVLRRRAMERGAREMGADWIVTGHNADDVAETVLMNFLRGDVARLRRAANEATGATNEATAATSEFSRATNEAIGANEATGATNEATGATNKANEADEATGTTKKEPNRNPTEPNDNSSESNGNSTEPNDNLSEPNRNPTKLNRNPVEPNRNPVEPNDNPMEPNHDSLEPKRNPTKFDRNSMQPNDNSSELKGNLRNSNGNPTKFNRNPRKPTQTPPQPNATRPAVPRLKPLRHAAQREIVLYAHFLGLSYASSECHHAPLAFRGHPRALLKDLEAARPAAVAALAHSGHRLALGAAPGAGEPPGACGRCGSVASGDLCMACALLAALDKGRPRLALGKRGVRVATGADRQWEGEGGEQGGHWDGPCGGHGVGGPGDGSGGHQEGGDGHWDGSGGHGVEGPGNGGGGRQEGGGGQGATGCEGGGRGGSSGGHGGCGCRAGGPGAGGQAGGHGGCSGGHGGGSGGHGGCGCRGGGPRADGQAGGHGGNSGCHGGSFGGHGVCGHRVAFGDPLGREVQVEVVSRGGRSERRCLRGFGHIRGGLDIWDF
SIO_010081: LOC116779898
subclass of: SO_0000673
so part of: LOC116779898
location: complement(join(562344..562623,562693..563670,563797..564112,564925..565434,568230..568623))
location: region:562344-568623:-1
so has part: feature:568230-568623:-1:exon
so has part: feature:564925-565434:-1:exon
so has part: feature:563797-564112:-1:exon
so has part: feature:562693-563670:-1:exon
so has part: feature:562344-562623:-1:exon

XP_032530288.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:568230-568623:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564925-565434:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:563797-564112:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:562693-563670:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:562344-562623:-1:exon

LOC116779898
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779898
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116779898 isoform X4
translation: MKTRPFPPNHAPFRQTAPFSVKTRPSTSSASRLRPAPEFGAAAPLNFRCGRDLNHPRVTPLFALIGYTDPEVARRRGYTQKSRVDWSIRGGAGLRMGEKAPIGRLRWAWPEYARGTAGKVRGGPGRAKPTEGPAMPPPRCSRCPNPSSLLRSRSLLPFCRHCFVAAFEAETLRALLGDPSGTPKPGQGVAVAASGGKDSTVLAHVLSQLDRCHNLGLKLALLAVDEGISGYREPSLVALREVALALPLPLLVVEHRELFGLTVDQAGPALGGRSRCTLCGVLRRRAMERGAREMGADWIVTGHNADDVAETVLMNFLRGDVARLRRAANEATGATNEATAATSEFSRATNEAIGANEATGATNEATGATNKANEADEATGTTKKEPNRNPTEPNDNSSESNGNSTEPSDNSSELNGNPTEPNDNSSEPNRNPTKFDRNSMQPNDNSSELKGNLRNSNGNPTKFNRNPRKPTQTPPQPNATRPAVPRLKPLRHAAQREIVLYAHFLGLSYASSECHHAPLAFRGHPRALLKDLEAARPAAVAALAHSGHRLALGAAPGAGEPPGACGRCGSVASGDLCMACALLAALDKGRPRLALGKRGVRVATGADRQWEGEGGEQGGHWDGPCGGHGVGGPGDGSGGHQEGGDGHWDGSGGHGVEGPGNGGGGRQEGGGGQGATGCEGGGRGGSSGGHGGCGCRAGGPGAGGQAGGHGGCSGGHGGGSGGHGGCGCRGGGPRADGQAGGHGGNSGCHGGSFGGHGVCGHRVAFGDPLGREVQVEVVSRGGRSERRCLRGFGHIRGGLDIWDF
SIO_010081: LOC116779898
subclass of: SO_0000673
so part of: LOC116779898
location: complement(join(562344..562623,562693..563540,563730..564112,564925..565434,568230..568623))
location: region:562344-568623:-1
so has part: feature:568230-568623:-1:exon
so has part: feature:564925-565434:-1:exon
so has part: feature:563730-564112:-1:exon
so has part: feature:562693-563540:-1:exon
so has part: feature:562344-562623:-1:exon

XP_032530290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:568230-568623:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564925-565434:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:563730-564112:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:562693-563540:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:562344-562623:-1:exon

LOC116779898
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779898
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116779898 isoform X1
translation: MKTRPFPPNHAPFRQTAPFSVKTRPSTSSASRLRPAPEFGAAAPLNFRCGRDLNHPRVTPLFALIGYTDPEVARRRGYTQKSRVDWSIRGGAGLRMGEKAPIGRLRWAWPEYARGTAGKVRGGPGRAKPTEGPAMPPPRCSRCPNPSSLLRSRSLLPFCRHCFVAAFEAETLRALLGDPSGTPKPGQGVAVAASGGKDSTVLAHVLSQLDRCHNLGLKLALLAVDEGISGYREPSLVALREVALALPLPLLVVEHRELFGLTVDQAGPALGGRSRCTLCGVLRRRAMERGAREMGADWIVTGHNADDVAETVLMNFLRGDVARLRRAANEATGATNEATAATSEFSRATNEAIGANEATGATNEATGATNKANEADEATGTTKKEPNRNPTEPNDNSSESNGNSTEPSDNSSELNGNPTEPNDNSSEPNGNSSEPNNNSMEPNDNSSELNDNLSEPNRNPTKLNRNPVEPNRNPVEPNDNPMEPNHDSLEPKRNPTKFDRNSMQPNDNSSELKGNLRNSNGNPTKFNRNPRKPTQTPPQPNATRPAVPRLKPLRHAAQREIVLYAHFLGLSYASSECHHAPLAFRGHPRALLKDLEAARPAAVAALAHSGHRLALGAAPGAGEPPGACGRCGSVASGDLCMACALLAALDKGRPRLALGKRGVRVATGADRQWEGEGGEQGGHWDGPCGGHGVGGPGDGSGGHQEGGDGHWDGSGGHGVEGPGNGGGGRQEGGGGQGATGCEGGGRGGSSGGHGGCGCRAGGPGAGGQAGGHGGCSGGHGGGSGGHGGCGCRGGGPRADGQAGGHGGNSGCHGGSFGGHGVCGHRVAFGDPLGREVQVEVVSRGGRSERRCLRGFGHIRGGLDIWDF
SIO_010081: LOC116779898
subclass of: SO_0000673
so part of: LOC116779898
location: complement(join(562344..562623,562693..564112,564925..565434,568230..568623))
location: region:562344-568623:-1
so has part: feature:568230-568623:-1:exon
so has part: feature:564925-565434:-1:exon
so has part: feature:562693-564112:-1:exon
so has part: feature:562344-562623:-1:exon

XP_032530287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:568230-568623:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564925-565434:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:562693-564112:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:562344-562623:-1:exon

LOC116779898
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779898
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcriptional regulator ovo-like isoform X3
translation: MKTRPFPPNHAPFRQTAPFSVKTRPSTSSASRLRPAPEFGAAAPLNFRCGRDLNHPRVTPLFALIGYTDPEVARRRGYTQKSRVDWSIRGGAGLRMGEKAPIGRLRWAWPEYARGTAGKVRGGPGRAKPTEGPAMPPPRCSRCPNPSSLLRSRSLLPFCRHCFVAAFEAETLRALLGDPSGTPKPGQGVAVAASGGKDSTVLAHVLSQLDRCHNLGLKLALLAVDEGISGYREPSLVALREVALALPLPLLVVEHRELFGLTVDQAGPALGGRSRCTLCGVLRRRAMERGAREMGADWIVTGHNADDVAETVLMNFLRGDVARLRRAANEATGATNEATAATSEFSRATNEAIGANEATGATNEATGATNKANEADEATGTTKKEPNRNPTEPNDNSSESNGNSTEPSDNSSELNGNPTEPNDNSSEPNGNSSEPNNNSMEPNDNSSELNDNLSEPNRNPTKLNRNPVEPNRNPVEPNDNPMEPNHDSLEPKRNPTKFDRNSMQPNDNSSELKGNLRNSNGNPTKFNRNPRKPTQTPPQPNATRPAVPRLKPLRHAAQREIVLYAHFLGLSYASSECHHAPLAFRGHPRALLKDLEAARPAAVAALAHSGHRLALGAAPGAGEPPGACGRCGSVASGDLCMACALLAALDKGRPRLALGKRGVRVATGADRQWEGEGGEQGGHWDGPCGGHGVGGPGDGSGGHQEGGDGHWDGSGGHGVEGPGNGGGGRQEGGGGQGATGCEGGGRGGSSGGHGGCGCRAGGPGAGGQAGGHGGCSRGHGGSSGDPLGREVQVEVVSRGGRSERRCLRGFGHIRGGLDIWDF
SIO_010081: LOC116779898
subclass of: SO_0000673
so part of: LOC116779898
location: complement(join(562344..562464,562669..564112,564925..565434,568230..568623))
location: region:562344-568623:-1
so has part: feature:568230-568623:-1:exon
so has part: feature:564925-565434:-1:exon
so has part: feature:562669-564112:-1:exon
so has part: feature:562344-562464:-1:exon

XP_032530289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:568230-568623:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564925-565434:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:562669-564112:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:562344-562464:-1:exon

TYROBP
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: TYROBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 568770..571518
location: region:568770-571518:1
so has part: feature:568770-571518:1:exon
subclass of: SO_0000010

116779908
type: Gene
SIO_000068: ncbigene

position:568770:1
position: 568770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571518:1
position: 571518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:568770-571518:1:exon

TYROBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: TYROBP
product: transmembrane immune signaling adaptor TYROBP
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032674427.1
SIO_010081: TYROBP
subclass of: SO_0000673
so part of: TYROBP
location: join(568770..568848,569422..569442,570849..570956,571329..571518)
location: region:568770-571518:1
so has part: feature:568770-568848:1:exon
so has part: feature:569422-569442:1:exon
so has part: feature:570849-570956:1:exon
so has part: feature:571329-571518:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:568770-568848:1:exon

position:568848:1
position: 568848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:569422-569442:1:exon

position:569422:1
position: 569422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:569442:1
position: 569442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:570849-570956:1:exon

position:570849:1
position: 570849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570956:1
position: 570956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:571329-571518:1:exon

position:571329:1
position: 571329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TYROBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: TYROBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TYRO protein tyrosine kinase-binding protein
translation: MGPPRTLGLVLLLLGAAMAEKECSGWGAGPVAALIITDIALSLALAGAAFWAGGRGRAPPRPRPPEQDSAYQELQGARADLYSELKR
SIO_010081: TYROBP
subclass of: SO_0000673
so part of: TYROBP
location: join(568806..568848,569422..569442,570849..570956,571329..571420)
location: region:568806-571420:1
so has part: feature:568806-568848:1:exon
so has part: feature:569422-569442:1:exon
so has part: feature:570849-570956:1:exon
so has part: feature:571329-571420:1:exon

XP_032530318.1
type: Protein
SIO_000068: ncbiprotein

position:568806:1
position: 568806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571420:1
position: 571420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:568806-568848:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:569422-569442:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:570849-570956:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:571329-571420:1:exon

LOC116779912
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779912
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(576469..585158)
location: region:576469-585158:-1
so has part: feature:576469-585158:-1:exon
subclass of: SO_0000011

116779912
type: Gene
SIO_000068: ncbigene

position:576469:-1
position: 576469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585158:-1
position: 585158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576469-585158:-1:exon

LOC116779912
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116779912
product: uncharacterized LOC116779912
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004354248.1
SIO_010081: LOC116779912
subclass of: SO_0000673
so part of: LOC116779912
location: complement(join(576469..576603,576696..576716,582537..582540,585148..585158))
location: region:576469-585158:-1
so has part: feature:585148-585158:-1:exon
so has part: feature:582537-582540:-1:exon
so has part: feature:576696-576716:-1:exon
so has part: feature:576469-576603:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:585148-585158:-1:exon

position:585148:-1
position: 585148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:582537-582540:-1:exon

position:582537:-1
position: 582537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582540:-1
position: 582540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:576696-576716:-1:exon

position:576696:-1
position: 576696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576716:-1
position: 576716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:576469-576603:-1:exon

position:576603:-1
position: 576603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116779910
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779910
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(579366..582150)
location: region:579366-582150:-1
so has part: feature:579366-582150:-1:exon
subclass of: SO_0000011

116779910
type: Gene
SIO_000068: ncbigene

position:579366:-1
position: 579366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582150:-1
position: 582150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:579366-582150:-1:exon

LOC116779910
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116779910
product: uncharacterized LOC116779910
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004354245.1
SIO_010081: LOC116779910
subclass of: SO_0000673
so part of: LOC116779910
location: complement(join(579366..579638,580219..580448,580972..581145,582096..582150))
location: region:579366-582150:-1
so has part: feature:582096-582150:-1:exon
so has part: feature:580972-581145:-1:exon
so has part: feature:580219-580448:-1:exon
so has part: feature:579366-579638:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:582096-582150:-1:exon

position:582096:-1
position: 582096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:580972-581145:-1:exon

position:580972:-1
position: 580972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581145:-1
position: 581145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:580219-580448:-1:exon

position:580219:-1
position: 580219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580448:-1
position: 580448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:579366-579638:-1:exon

position:579638:-1
position: 579638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HAUS5
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: HAUS5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(591681..604234)
location: region:591681-604234:-1
so has part: feature:591681-604234:-1:exon
subclass of: SO_0000010

116779899
type: Gene
SIO_000068: ncbigene

position:591681:-1
position: 591681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604234:-1
position: 604234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:591681-604234:-1:exon

HAUS5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: HAUS5
product: HAUS augmin like complex subunit 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032674401.1
SIO_010081: HAUS5
subclass of: SO_0000673
so part of: HAUS5
location: complement(join(591681..591868,592449..592678,593202..593375,594326..594406,595650..595794,596777..596898,597564..597627,598243..598313,598750..598792,598877..598944,599047..599110,599614..599749,600924..601044,601453..601471,601959..601991,603444..603506,604099..604234))
location: region:591681-604234:-1
so has part: feature:604099-604234:-1:exon
so has part: feature:603444-603506:-1:exon
so has part: feature:601959-601991:-1:exon
so has part: feature:601453-601471:-1:exon
so has part: feature:600924-601044:-1:exon
so has part: feature:599614-599749:-1:exon
so has part: feature:599047-599110:-1:exon
so has part: feature:598877-598944:-1:exon
so has part: feature:598750-598792:-1:exon
so has part: feature:598243-598313:-1:exon
so has part: feature:597564-597627:-1:exon
so has part: feature:596777-596898:-1:exon
so has part: feature:595650-595794:-1:exon
so has part: feature:594326-594406:-1:exon
so has part: feature:593202-593375:-1:exon
so has part: feature:592449-592678:-1:exon
so has part: feature:591681-591868:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:604099-604234:-1:exon

position:604099:-1
position: 604099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:603444-603506:-1:exon

position:603444:-1
position: 603444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603506:-1
position: 603506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:601959-601991:-1:exon

position:601959:-1
position: 601959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601991:-1
position: 601991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:601453-601471:-1:exon

position:601453:-1
position: 601453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601471:-1
position: 601471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:600924-601044:-1:exon

position:600924:-1
position: 600924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601044:-1
position: 601044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:599614-599749:-1:exon

position:599614:-1
position: 599614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599749:-1
position: 599749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:599047-599110:-1:exon

position:599047:-1
position: 599047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599110:-1
position: 599110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:598877-598944:-1:exon

position:598877:-1
position: 598877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598944:-1
position: 598944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:598750-598792:-1:exon

position:598750:-1
position: 598750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598792:-1
position: 598792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:598243-598313:-1:exon

position:598243:-1
position: 598243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598313:-1
position: 598313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:597564-597627:-1:exon

position:597564:-1
position: 597564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597627:-1
position: 597627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:596777-596898:-1:exon

position:596777:-1
position: 596777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596898:-1
position: 596898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:595650-595794:-1:exon

position:595650:-1
position: 595650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:595794:-1
position: 595794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:594326-594406:-1:exon

position:594326:-1
position: 594326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594406:-1
position: 594406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:593202-593375:-1:exon

position:593202:-1
position: 593202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593375:-1
position: 593375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:592449-592678:-1:exon

position:592449:-1
position: 592449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592678:-1
position: 592678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:591681-591868:-1:exon

position:591868:-1
position: 591868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HAUS5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: HAUS5
product: HAUS augmin like complex subunit 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032674402.1
SIO_010081: HAUS5
subclass of: SO_0000673
so part of: HAUS5
location: complement(join(591713..591868,592449..592525,593202..593375,594326..594406,595650..595794,596777..596898,597564..597627,598243..598313,598750..598792,598877..598944,599047..599110,599614..599749,600924..601044,601453..601471,601959..601991,603444..603506,604099..604234))
location: region:591713-604234:-1
so has part: feature:604099-604234:-1:exon
so has part: feature:603444-603506:-1:exon
so has part: feature:601959-601991:-1:exon
so has part: feature:601453-601471:-1:exon
so has part: feature:600924-601044:-1:exon
so has part: feature:599614-599749:-1:exon
so has part: feature:599047-599110:-1:exon
so has part: feature:598877-598944:-1:exon
so has part: feature:598750-598792:-1:exon
so has part: feature:598243-598313:-1:exon
so has part: feature:597564-597627:-1:exon
so has part: feature:596777-596898:-1:exon
so has part: feature:595650-595794:-1:exon
so has part: feature:594326-594406:-1:exon
so has part: feature:593202-593375:-1:exon
so has part: feature:592449-592525:-1:exon
so has part: feature:591713-591868:-1:exon

position:591713:-1
position: 591713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604099-604234:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:603444-603506:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:601959-601991:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:601453-601471:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:600924-601044:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599614-599749:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599047-599110:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:598877-598944:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:598750-598792:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:598243-598313:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:597564-597627:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:596777-596898:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:595650-595794:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:594326-594406:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:593202-593375:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:592449-592525:-1:exon

position:592525:-1
position: 592525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:591713-591868:-1:exon

HAUS5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: HAUS5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HAUS augmin-like complex subunit 5 isoform X2
translation: MMAAALDNWLRTEMELQPPAVPPPAVLRRLCSGPGAPVWEFIIRHVKNSRNVKKIRGNLLWYQQKLEAAVSPPDRQEALQEAVSRMRAEVRRMDQALGGAQEAALRLEELLRAGQSRLWVEHRRGAELRLLGAELAPEGLQGLQGALRVPRDRPHRTRAELSATMAMGAEPEVLTSIRSLCMSREGEEFLEPHPPNRDSQELRKDWLEKAEAELGQHHPEEVLWALEALTNDSMRMLRASPTPSPDAPLTTKELIQECWMLVGGVWGSLPPLIFQLNHLQQNLNELVPKLGGDPKIRLALTRVYLEGVRGSLTRRVQELRGGLEDPQPPTPGVLRQRLQRGRRRVLQRQRRLRLLSAATRGRQALLRLLQGQVRLAAGAGPGSAPPLLEREGRHRRLLLGALGALGEPLPHPGPSPLDSLRRNLGLGPEQRLRLVSDKCQECLEGWPRLLDTVSQWWDLPAQHIQATPPDRIPFSHWLERWRGAVLALTTPIPEVGEEPVEPHP
SIO_010081: HAUS5
subclass of: SO_0000673
so part of: HAUS5
location: complement(join(591721..591868,592449..592525,593202..593375,594326..594406,595650..595794,596777..596898,597564..597627,598243..598313,598750..598792,598877..598944,599047..599110,599614..599749,600924..601044,601453..601471,601959..601991,603444..603506,604099..604184))
location: region:591721-604184:-1
so has part: feature:604099-604184:-1:exon
so has part: feature:603444-603506:-1:exon
so has part: feature:601959-601991:-1:exon
so has part: feature:601453-601471:-1:exon
so has part: feature:600924-601044:-1:exon
so has part: feature:599614-599749:-1:exon
so has part: feature:599047-599110:-1:exon
so has part: feature:598877-598944:-1:exon
so has part: feature:598750-598792:-1:exon
so has part: feature:598243-598313:-1:exon
so has part: feature:597564-597627:-1:exon
so has part: feature:596777-596898:-1:exon
so has part: feature:595650-595794:-1:exon
so has part: feature:594326-594406:-1:exon
so has part: feature:593202-593375:-1:exon
so has part: feature:592449-592525:-1:exon
so has part: feature:591721-591868:-1:exon

XP_032530293.1
type: Protein
SIO_000068: ncbiprotein

position:591721:-1
position: 591721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604184:-1
position: 604184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604099-604184:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:603444-603506:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:601959-601991:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:601453-601471:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:600924-601044:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599614-599749:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599047-599110:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:598877-598944:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:598750-598792:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:598243-598313:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:597564-597627:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:596777-596898:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:595650-595794:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:594326-594406:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:593202-593375:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:592449-592525:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:591721-591868:-1:exon

HAUS5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: HAUS5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HAUS augmin-like complex subunit 5 isoform X1
translation: MMAAALDNWLRTEMELQPPAVPPPAVLRRLCSGPGAPVWEFIIRHVKNSRNVKKIRGNLLWYQQKLEAAVSPPDRQEALQEAVSRMRAEVRRMDQALGGAQEAALRLEELLRAGQSRLWVEHRRGAELRLLGAELAPEGLQGLQGALRVPRDRPHRTRAELSATMAMGAEPEVLTSIRSLCMSREGEEFLEPHPPNRDSQELRKDWLEKAEAELGQHHPEEVLWALEALTNDSMRMLRASPTPSPDAPLTTKELIQECWMLVGGVWGSLPPLIFQLNHLQQNLNELVPKLGGDPKIRLALTRVYLEGVRGSLTRRVQELRGGLEDPQPPTPGVLRQRLQRGRRRVLQRQRRLRLLSAATRGRQALLRLLQGQVRLAAGAGPGSAPPLLEREGRHRRLLLGALGALGEPLPHPGPSPLDSLRRNLGLGPEQPLPLLLHRVAELRHDLRRAGLPKKGAGPPPPKEVCPVGPRPTPGPNPELLQRLRLVSDKCQECLEGWPRLLDTVSQWWDLPAQHIQATPPDRIPFSHWLERWRGAVLALTTPIPEVGEEPVEPHP
SIO_010081: HAUS5
subclass of: SO_0000673
so part of: HAUS5
location: complement(join(591721..591868,592449..592678,593202..593375,594326..594406,595650..595794,596777..596898,597564..597627,598243..598313,598750..598792,598877..598944,599047..599110,599614..599749,600924..601044,601453..601471,601959..601991,603444..603506,604099..604184))
location: region:591721-604184:-1
so has part: feature:604099-604184:-1:exon
so has part: feature:603444-603506:-1:exon
so has part: feature:601959-601991:-1:exon
so has part: feature:601453-601471:-1:exon
so has part: feature:600924-601044:-1:exon
so has part: feature:599614-599749:-1:exon
so has part: feature:599047-599110:-1:exon
so has part: feature:598877-598944:-1:exon
so has part: feature:598750-598792:-1:exon
so has part: feature:598243-598313:-1:exon
so has part: feature:597564-597627:-1:exon
so has part: feature:596777-596898:-1:exon
so has part: feature:595650-595794:-1:exon
so has part: feature:594326-594406:-1:exon
so has part: feature:593202-593375:-1:exon
so has part: feature:592449-592678:-1:exon
so has part: feature:591721-591868:-1:exon

XP_032530292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:604099-604184:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:603444-603506:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:601959-601991:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:601453-601471:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:600924-601044:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599614-599749:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599047-599110:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:598877-598944:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:598750-598792:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:598243-598313:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:597564-597627:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:596777-596898:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:595650-595794:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:594326-594406:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:593202-593375:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:592449-592678:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:591721-591868:-1:exon

LOC116779920
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779920
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(686356..688273)
location: region:686356-688273:-1
so has part: feature:686356-688273:-1:exon
subclass of: SO_0000011

116779920
type: Gene
SIO_000068: ncbigene

position:686356:-1
position: 686356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688273:-1
position: 688273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:686356-688273:-1:exon

LOC116779920
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116779920
product: uncharacterized LOC116779920
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004354253.1
SIO_010081: LOC116779920
subclass of: SO_0000673
so part of: LOC116779920
location: complement(join(686356..686697,687412..688273))
location: region:686356-688273:-1
so has part: feature:687412-688273:-1:exon
so has part: feature:686356-686697:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:687412-688273:-1:exon

position:687412:-1
position: 687412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:686356-686697:-1:exon

position:686697:-1
position: 686697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116779918
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779918
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(688726..692770)
location: region:688726-692770:-1
so has part: feature:688726-692770:-1:exon
subclass of: SO_0000010

116779918
type: Gene
SIO_000068: ncbigene

position:688726:-1
position: 688726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:692770:-1
position: 692770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:688726-692770:-1:exon

LOC116779918
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779918
product: toll-like receptor 13
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 5 bases in 5 codons; deleted 9 bases in 8 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032674430.1
SIO_010081: LOC116779918
subclass of: SO_0000673
so part of: LOC116779918
location: complement(join(688726..691974,692537..692770))
location: region:688726-692770:-1
so has part: feature:692537-692770:-1:exon
so has part: feature:688726-691974:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:692537-692770:-1:exon

position:692537:-1
position: 692537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:688726-691974:-1:exon

position:691974:-1
position: 691974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116779918
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779918
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 5 bases in 5 codons; deleted 9 bases in 8 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: toll-like receptor 13
translation: MPTDPDVHSPCSPSEPLHSPPSYPNSPVHPVQPTGDQYNSVLPPRNQTRIPPGQGRMYAPLLVTLVTLVTVPTRVSPYGFRNCIQAPWDLGLFRCVQRFLTTVGAAVGDLPANTTSLNLSVNTLHQVPPDAFATSRLRTLDLTHNRLELLXPGAFRGLLALTHLDLAHNHLSVLPTGVFTGLGNLSTLRLDHNPLLAVAPGALRALPMLATLQLRGGRXSALGPVATAVGHLPRLGLLDLCGNTLSALAPGXPPALRVLLLCNNSLGALSGAAPEVLPEGLQVLDLSYNNISDPAPLGRLHLYNLTRLHLAGNPLDVARLLRVVPPRCVDVSGLQVGAGGLTELCQHLAGPWLQRLQLRHMGLAAMPANALADCPVLGALDISGNRLQNLSCVGQLLGPAQRAALGELVAEHNLLRWLPSCHGAPVLRRLYNVSLRFNRILVAGPRAFANTPALRRLRLDVNGLARLDRAALWGLHNLQHLRLDNNLLTDLLPGSFADLHQLRTLNLRNNRVAVLFPGTFRGLIHLQTLDLGGNNLRHCGRRAPGACPQLFRLYLDRNRLLEVSEGSVRPVHTTLGVLDLARQCAALPEQHPRQPPPFRHLHQLYDLTRQAQQPYGLRVGPHIRFFQGLGALRSLYLSQNQLSAVPADAFDDLAQLQYLTLDDGSVGWVPCLPRLQEPERLRSLDLEERGAAWATAEVFGNMTQLEELRLAKNELRGLDTALTTRLPALRYLDLRKCXLSCSCANVWLPAWLAQGLCRWLPVQLHLRRGGRGPGILHSFDTRVCYLDMGRYLFAGTAPAVLLLLALPLLHHRGYWRLRYHRTCCRHGHRGRWRRGAAPLHLRPFVSYNSADERWVLEELVPELEHGALRLCLHHRDFRPGRAIVDNIVDXVYNSRRTVCVVSRGYLRSEWCSLEIQLASYRLFDELRDVLVLVFLEDIPEAELSAFHRMRRVLLRRTHLRWPRELLPGPSLGQAQGCPEWWG
SIO_010081: LOC116779918
subclass of: SO_0000673
so part of: LOC116779918
location: complement(join(689168..691974,692537..692682))
location: region:689168-692682:-1
so has part: feature:692537-692682:-1:exon
so has part: feature:689168-691974:-1:exon

XP_032530321.1
type: Protein
SIO_000068: ncbiprotein

position:689168:-1
position: 689168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:692682:-1
position: 692682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:692537-692682:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:689168-691974:-1:exon

LOC116779894
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779894
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(693383..698482)
location: region:693383-698482:-1
so has part: feature:693383-698482:-1:exon
subclass of: SO_0000010

116779894
type: Gene
SIO_000068: ncbigene

position:693383:-1
position: 693383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:698482:-1
position: 698482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:693383-698482:-1:exon

LOC116779894
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779894
product: histone H3-like centromeric protein A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032674389.1
SIO_010081: LOC116779894
subclass of: SO_0000673
so part of: LOC116779894
location: complement(join(693383..693995,694628..694702,696095..696186,696632..696759,697601..698482))
location: region:693383-698482:-1
so has part: feature:697601-698482:-1:exon
so has part: feature:696632-696759:-1:exon
so has part: feature:696095-696186:-1:exon
so has part: feature:694628-694702:-1:exon
so has part: feature:693383-693995:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:697601-698482:-1:exon

position:697601:-1
position: 697601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:696632-696759:-1:exon

position:696632:-1
position: 696632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:696759:-1
position: 696759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:696095-696186:-1:exon

position:696095:-1
position: 696095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:696186:-1
position: 696186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:694628-694702:-1:exon

position:694628:-1
position: 694628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694702:-1
position: 694702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:693383-693995:-1:exon

position:693995:-1
position: 693995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116779894
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779894
product: histone H3-like centromeric protein A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032674391.1
SIO_010081: LOC116779894
subclass of: SO_0000673
so part of: LOC116779894
location: complement(join(693383..693995,694628..694702,696095..696186,696625..696759,696948..697581))
location: region:693383-697581:-1
so has part: feature:696948-697581:-1:exon
so has part: feature:696625-696759:-1:exon
so has part: feature:696095-696186:-1:exon
so has part: feature:694628-694702:-1:exon
so has part: feature:693383-693995:-1:exon

position:697581:-1
position: 697581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:696948-697581:-1:exon

position:696948:-1
position: 696948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:696625-696759:-1:exon

position:696625:-1
position: 696625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:696095-696186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:694628-694702:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:693383-693995:-1:exon

LOC116779894
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779894
product: histone H3-like centromeric protein A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032674390.1
SIO_010081: LOC116779894
subclass of: SO_0000673
so part of: LOC116779894
location: complement(join(693383..693995,694628..694702,696095..696186,696625..696816))
location: region:693383-696816:-1
so has part: feature:696625-696816:-1:exon
so has part: feature:696095-696186:-1:exon
so has part: feature:694628-694702:-1:exon
so has part: feature:693383-693995:-1:exon

position:696816:-1
position: 696816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:696625-696816:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:696095-696186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:694628-694702:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:693383-693995:-1:exon

LOC116779894
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779894
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116779894 isoform X1
translation: MGSVPKELLRSTFHGVSPEGTVPGPHSIGSVPQALLQISFHGPFPAGHWQALGAPGPCWEPKRDTLGATGSTGRYWNHTGCTGTTTGATRIILRATGTMLGSYWECLEPHWGNCVSLTLGPRTEPVVWWPRHAPPQAHPPAASPPSSPAIAPPAPAGFRPGQRALQEIRRYQSSTRLLLRPLPFSRLVRELCLLFTRGLIIAGSAWPCWPYRRQQRPSS
SIO_010081: LOC116779894
subclass of: SO_0000673
so part of: LOC116779894
location: complement(join(693972..693995,694628..694702,696095..696186,696632..696759,697601..697941))
location: region:693972-697941:-1
so has part: feature:697601-697941:-1:exon
so has part: feature:696632-696759:-1:exon
so has part: feature:696095-696186:-1:exon
so has part: feature:694628-694702:-1:exon
so has part: feature:693972-693995:-1:exon

XP_032530280.1
type: Protein
SIO_000068: ncbiprotein

position:693972:-1
position: 693972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:697941:-1
position: 697941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:697601-697941:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:696632-696759:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:696095-696186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:694628-694702:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:693972-693995:-1:exon

LOC116779894
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779894
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H3-like centromeric protein A isoform X2
translation: MPRPKPTPRRRRPPPAPPSPPPRRRVRRFRPGQRALQEIRRYQSSTRLLLRPLPFSRLVRELCLLFTRGLIIAGSAWPCWPYRRQQRPSS
SIO_010081: LOC116779894
subclass of: SO_0000673
so part of: LOC116779894
location: complement(join(693972..693995,694628..694702,696095..696186,696625..696706))
location: region:693972-696706:-1
so has part: feature:696625-696706:-1:exon
so has part: feature:696095-696186:-1:exon
so has part: feature:694628-694702:-1:exon
so has part: feature:693972-693995:-1:exon

XP_032530281.1
type: Protein
SIO_000068: ncbiprotein

position:696706:-1
position: 696706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:696625-696706:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:696095-696186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:694628-694702:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:693972-693995:-1:exon

LOC116779894
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779894
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H3-like centromeric protein A isoform X2
translation: MPRPKPTPRRRRPPPAPPSPPPRRRVRRFRPGQRALQEIRRYQSSTRLLLRPLPFSRLVRELCLLFTRGLIIAGSAWPCWPYRRQQRPSS
SIO_010081: LOC116779894
subclass of: SO_0000673
so part of: LOC116779894
location: complement(join(693972..693995,694628..694702,696095..696186,696625..696706))
location: region:693972-696706:-1
so has part: feature:696625-696706:-1:exon
so has part: feature:696095-696186:-1:exon
so has part: feature:694628-694702:-1:exon
so has part: feature:693972-693995:-1:exon

XP_032530282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:696625-696706:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:696095-696186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:694628-694702:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:693972-693995:-1:exon

LOC116779892
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779892
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(698002..700170)
location: region:698002-700170:-1
so has part: feature:698002-700170:-1:exon
subclass of: SO_0000010

116779892
type: Gene
SIO_000068: ncbigene

position:698002:-1
position: 698002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700170:-1
position: 700170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:698002-700170:-1:exon

LOC116779892
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779892
product: uncharacterized LOC116779892
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674386.1
SIO_010081: LOC116779892
subclass of: SO_0000673
so part of: LOC116779892
location: complement(join(698002..698083,698651..698792,698895..698961,699324..699666,699980..700023,700141..700170))
location: region:698002-700170:-1
so has part: feature:700141-700170:-1:exon
so has part: feature:699980-700023:-1:exon
so has part: feature:699324-699666:-1:exon
so has part: feature:698895-698961:-1:exon
so has part: feature:698651-698792:-1:exon
so has part: feature:698002-698083:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:700141-700170:-1:exon

position:700141:-1
position: 700141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:699980-700023:-1:exon

position:699980:-1
position: 699980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700023:-1
position: 700023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:699324-699666:-1:exon

position:699324:-1
position: 699324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:699666:-1
position: 699666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:698895-698961:-1:exon

position:698895:-1
position: 698895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:698961:-1
position: 698961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:698651-698792:-1:exon

position:698651:-1
position: 698651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:698792:-1
position: 698792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:698002-698083:-1:exon

position:698083:-1
position: 698083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116779892
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779892
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116779892
translation: MERGLGLEQRAERLVRKRPRPRRPPHPVASEAAPWGGACAGHVPSGRATHWSHVSPPRPQSGATSAPPTPGATSSWPDSQESLQWEPCLRSRDATGALWGRHVGCHVILRICGQSGVASRMPRRGHPHSRHWFVPRTLSCGCCGATTGPYENSSGLLRPFWSPPGTPPNLGGANKAMKPQSCSFTDPRIPSPTFGSLQMPQEGPRHRSDDDDDGGKAIPSQLQEQFSL
SIO_010081: LOC116779892
subclass of: SO_0000673
so part of: LOC116779892
location: complement(join(698002..698083,698651..698792,698895..698961,699324..699666,699980..700023,700141..700149))
location: region:698002-700149:-1
so has part: feature:700141-700149:-1:exon
so has part: feature:699980-700023:-1:exon
so has part: feature:699324-699666:-1:exon
so has part: feature:698895-698961:-1:exon
so has part: feature:698651-698792:-1:exon
so has part: feature:698002-698083:-1:exon

XP_032530277.1
type: Protein
SIO_000068: ncbiprotein

position:700149:-1
position: 700149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:700141-700149:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:699980-700023:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:699324-699666:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:698895-698961:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:698651-698792:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:698002-698083:-1:exon

LOC116779895
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779895
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 700356..706850
location: region:700356-706850:1
so has part: feature:700356-706850:1:exon
subclass of: SO_0000010

116779895
type: Gene
SIO_000068: ncbigene

position:700356:1
position: 700356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:706850:1
position: 706850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:700356-706850:1:exon

LOC116779895
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779895
product: IgGFc-binding protein-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032674393.1
SIO_010081: LOC116779895
subclass of: SO_0000673
so part of: LOC116779895
location: join(700356..701580,702722..702766,704667..705869,706011..706345,706562..706850)
location: region:700356-706850:1
so has part: feature:700356-701580:1:exon
so has part: feature:702722-702766:1:exon
so has part: feature:704667-705869:1:exon
so has part: feature:706011-706345:1:exon
so has part: feature:706562-706850:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:700356-701580:1:exon

position:701580:1
position: 701580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:702722-702766:1:exon

position:702722:1
position: 702722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:702766:1
position: 702766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:704667-705869:1:exon

position:704667:1
position: 704667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:705869:1
position: 705869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:706011-706345:1:exon

position:706011:1
position: 706011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:706345:1
position: 706345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:706562-706850:1:exon

position:706562:1
position: 706562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116779895
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779895
product: IgGFc-binding protein-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032674392.1
SIO_010081: LOC116779895
subclass of: SO_0000673
so part of: LOC116779895
location: join(700356..701580,702722..702766,704667..705788)
location: region:700356-705788:1
so has part: feature:700356-701580:1:exon
so has part: feature:702722-702766:1:exon
so has part: feature:704667-705788:1:exon

position:705788:1
position: 705788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:700356-701580:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:702722-702766:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:704667-705788:1:exon

LOC116779895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779895
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IgGFc-binding protein-like isoform X1
translation: MDLGPDAVSIGSWEFGSSGTAMALRGTWWLLLSFCALSNCSSGGREFLVVFPQNDDESPSATLKLLLTRQGPSDTAASVTLHGPFGTREVTVPPGVTKAVPIPAHLELTGSRMANKTVVVRASADVAVVAMSAKGYTVGATALLPMPSLGTRYFVVTPMGSDNYGMAELVVVAGAAITASPSPPRPHSSMPGTPTCRARCCASSCSPTTACSCRAAGLHRHRCGGQHTCGCAQRPHLHQGGRGL
SIO_010081: LOC116779895
subclass of: SO_0000673
so part of: LOC116779895
location: join(701520..701580,702722..702766,704667..705295)
location: region:701520-705295:1
so has part: feature:701520-701580:1:exon
so has part: feature:702722-702766:1:exon
so has part: feature:704667-705295:1:exon

XP_032530283.1
type: Protein
SIO_000068: ncbiprotein

position:701520:1
position: 701520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:705295:1
position: 705295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:701520-701580:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:702722-702766:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:704667-705295:1:exon

LOC116779895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779895
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IgGFc-binding protein-like isoform X2
translation: MGLLVFGFESNTGYGFAGLCITAPEPVSCEDLMCEGRCEVVDGQPKCVQETFSTCWLASGSHYRSFDGKTFDFMGTCTYTLTTLCSSDPTFPTFSVEVQKEKKENSKVSSIGSINVRVDNVTVTVVQAENGMVRVNNHSSRLPISLSCGKLRVRQKGKSVLIQLDFMLKVLYDWDDHVVVKIPAAFSGRVCGLCGNSNGNPQDDAQAPDGSGGISWSWGRAGR
SIO_010081: LOC116779895
subclass of: SO_0000673
so part of: LOC116779895
location: join(705803..705869,706011..706345,706562..706831)
location: region:705803-706831:1
so has part: feature:705803-705869:1:exon
so has part: feature:706011-706345:1:exon
so has part: feature:706562-706831:1:exon

XP_032530284.1
type: Protein
SIO_000068: ncbiprotein

position:705803:1
position: 705803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:706831:1
position: 706831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:705803-705869:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:706011-706345:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:706562-706831:1:exon

LOC116779893
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779893
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 707290..720791
location: region:707290-720791:1
so has part: feature:707290-720791:1:exon
subclass of: SO_0000010

116779893
type: Gene
SIO_000068: ncbigene

position:707290:1
position: 707290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720791:1
position: 720791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:707290-720791:1:exon

LOC116779893
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779893
product: IgGFc-binding protein-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032674388.1
SIO_010081: LOC116779893
subclass of: SO_0000673
so part of: LOC116779893
location: join(707290..707403,707535..708135,708505..709074,709710..710290,710509..710968,712798..713126,714008..714228,714438..714580,715555..716117,716490..717013,718489..718618,718660..718764,719841..720295,720671..720791)
location: region:707290-720791:1
so has part: feature:707290-707403:1:exon
so has part: feature:707535-708135:1:exon
so has part: feature:708505-709074:1:exon
so has part: feature:709710-710290:1:exon
so has part: feature:710509-710968:1:exon
so has part: feature:712798-713126:1:exon
so has part: feature:714008-714228:1:exon
so has part: feature:714438-714580:1:exon
so has part: feature:715555-716117:1:exon
so has part: feature:716490-717013:1:exon
so has part: feature:718489-718618:1:exon
so has part: feature:718660-718764:1:exon
so has part: feature:719841-720295:1:exon
so has part: feature:720671-720791:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:707290-707403:1:exon

position:707403:1
position: 707403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:707535-708135:1:exon

position:707535:1
position: 707535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:708135:1
position: 708135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:708505-709074:1:exon

position:708505:1
position: 708505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:709074:1
position: 709074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:709710-710290:1:exon

position:709710:1
position: 709710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:710290:1
position: 710290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:710509-710968:1:exon

position:710509:1
position: 710509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:710968:1
position: 710968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:712798-713126:1:exon

position:712798:1
position: 712798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:713126:1
position: 713126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:714008-714228:1:exon

position:714008:1
position: 714008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:714228:1
position: 714228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:714438-714580:1:exon

position:714438:1
position: 714438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:714580:1
position: 714580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:715555-716117:1:exon

position:715555:1
position: 715555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:716117:1
position: 716117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:716490-717013:1:exon

position:716490:1
position: 716490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:717013:1
position: 717013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:718489-718618:1:exon

position:718489:1
position: 718489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:718618:1
position: 718618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:718660-718764:1:exon

position:718660:1
position: 718660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:718764:1
position: 718764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:719841-720295:1:exon

position:719841:1
position: 719841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720295:1
position: 720295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:720671-720791:1:exon

position:720671:1
position: 720671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116779893
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779893
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: IgGFc-binding protein-like
translation: MVECSSAATAPRLQQEVSRMGCEIMLEKDGPFGACHGHVDAQPYFQSCIRDSCLFPEQEDGMCPIIASYASVCQAAGVSIGRWRMDNFCSDIPCPPNSSYKLCSNTCQHSCGASSATCRGRCREGCACHDGFMLSGDECVPTAHCGCTHHGVYYKEDETFYPTEHEECRCLSSSAVECQNISCPDGNPGKVVDGIFQCPPPASGTCVAMGDSAYITFDGVTFNVTGSCSYILSQTCAGDVTSFVVTIQKEAHRKGKVSGIQALSVEVYGVNLTLTQGKGGDVMVNSISHHLPAILGEGQIQVYPHGTGVLLRTDFGLIVHYDLTQHVTLTVPQTYLGQLCGLCGNYNGQRDDDFHLSNGQLALDATAFGSAWKTKDRPCEDTYPAEECSTCSKEKVLVLQKPNYCGLLTAPEGPFGSCHSIIDPTPYSQSCVHNSVYPCKSLKCRQGAVPAPWLRIPLCPSAGGHVLGMGGSHFRTFDGLEFDFQGTCTYTMAESHGNDPRLEPFRVEARSDIRGGIRSVSYVSVVNIDVYGQRVSFHHNEDGKVRVNGELALLPVFLVDGRLRVHPSGLRVTLDTDFGLRVSYDWNWHLFIDLPSSFFDHVRGLCGNFNLQPLDDIPRLSSLAAAWPSCAGERGARQVLCRVLETYAATCQRSGATVGDWRTPAGCPVWHRLPSHLLDPDAPSSCALPCVESCVCDRDHVLSAGHCVPVSHCGCHRAGRYHRPVRSSGGDPLCRSWCRCDPELGMVVCEEARCKSGEVCAVVEGFRKCVATNRSICVATGDPHYXTFDGHRYDFMGTCVYLLAGLCSPDPPSCXFNVTVENNHRGNKRVSFTKVVTXEVFNVSLSLSQEHPKKVKLRVSLRGVHGFISTAFGVTVTFDWHSYARVILPSTFAGAVCGLCGNANGDPTTTLSPTRATLPTMRPTLGKLEGLRGPWVLPRVHRGLPGVQQHQRRTYRGDKHCGVLVKKRGPLATCHEVIDPAPFLEDCLFDACLFDGHHDAVCQAVGAYVSACQSRGVAVGPWRTHAFCSMGPVCPPNEHYELCGPPCPPTCQDESGPPSCPEPSPCSEGVSAIPCGCTLEGRYYPRGAQFYPSPSCTQRCVCSRGGTWSVDGERHVLPLWLGGGSLGVTQVGSHRLLHVRGGPKILYDGDSYAVLTLPPAQQPPRGLCGDPKILGTPPELHTPDPAGTPRAPRGAARCWRTPRGPSGGVTARCPRAHLDTCESRCARGGAEGAIPARIQGYAAACQAAGGEPRVARGDGMSPAVPPRSQYQLCARTVPAPAQVCRPTPLQRAVLRGLSVL
SIO_010081: LOC116779893
subclass of: SO_0000673
so part of: LOC116779893
location: join(708807..709074,709710..710290,710509..710968,712798..713126,714008..714228,714438..714580,715555..716117,716490..717013,718489..718618,718660..718764,719841..720295,720671..720791)
location: region:708807-720791:1
so has part: feature:708807-709074:1:exon
so has part: feature:709710-710290:1:exon
so has part: feature:710509-710968:1:exon
so has part: feature:712798-713126:1:exon
so has part: feature:714008-714228:1:exon
so has part: feature:714438-714580:1:exon
so has part: feature:715555-716117:1:exon
so has part: feature:716490-717013:1:exon
so has part: feature:718489-718618:1:exon
so has part: feature:718660-718764:1:exon
so has part: feature:719841-720295:1:exon
so has part: feature:720671-720791:1:exon

XP_032530279.1
type: Protein
SIO_000068: ncbiprotein

position:708807:1
position: 708807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:708807-709074:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:709710-710290:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:710509-710968:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:712798-713126:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:714008-714228:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:714438-714580:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:715555-716117:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:716490-717013:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:718489-718618:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:718660-718764:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:719841-720295:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:720671-720791:1:exon

LOC116779896
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779896
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 721677..723603
location: region:721677-723603:1
so has part: feature:721677-723603:1:exon
subclass of: SO_0000011

116779896
type: Gene
SIO_000068: ncbigene

position:721677:1
position: 721677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:723603:1
position: 723603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:721677-723603:1:exon

LOC116779896
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116779896
product: uncharacterized LOC116779896
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004354240.1
SIO_010081: LOC116779896
subclass of: SO_0000673
so part of: LOC116779896
location: join(721677..722043,722693..722972,723468..723603)
location: region:721677-723603:1
so has part: feature:721677-722043:1:exon
so has part: feature:722693-722972:1:exon
so has part: feature:723468-723603:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:721677-722043:1:exon

position:722043:1
position: 722043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:722693-722972:1:exon

position:722693:1
position: 722693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722972:1
position: 722972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:723468-723603:1:exon

position:723468:1
position: 723468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116779917
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116779917
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(728008..732718)
location: region:728008-732718:-1
so has part: feature:728008-732718:-1:exon
subclass of: SO_0000010

116779917
type: Gene
SIO_000068: ncbigene

position:728008:-1
position: 728008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:732718:-1
position: 732718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:728008-732718:-1:exon

LOC116779917
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116779917
product: leucine-rich repeat-containing protein 14-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032674429.1
SIO_010081: LOC116779917
subclass of: SO_0000673
so part of: LOC116779917
location: complement(join(728008..728247,729161..729790,730670..731294,731386..731696,732635..732718))
location: region:728008-732718:-1
so has part: feature:732635-732718:-1:exon
so has part: feature:731386-731696:-1:exon
so has part: feature:730670-731294:-1:exon
so has part: feature:729161-729790:-1:exon
so has part: feature:728008-728247:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:732635-732718:-1:exon

position:732635:-1
position: 732635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:731386-731696:-1:exon

position:731386:-1
position: 731386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:731696:-1
position: 731696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:730670-731294:-1:exon

position:730670:-1
position: 730670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:731294:-1
position: 731294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:729161-729790:-1:exon

position:729161:-1
position: 729161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:729790:-1
position: 729790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:728008-728247:-1:exon

position:728247:-1
position: 728247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116779917
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116779917
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: leucine-rich repeat-containing protein 14-like
translation: MDSLLFLSARRLVAHRPLPTVPAQLYPVLFQAAFLDGRPXVLQDLVAEWPFPVLNFQRIVGVGSRELLRDHSSKLCIQSVIGAVVEQIRQDLEEAGHDSSRCRLRVLDVTGLRDDAAGRAPEGMSVWSGTVALAKACVEVSKHQRELQKCRSRSHKGRSCTTAAPRFIDIHADLFVNGTSYGILWDALQAVNTSPLRLKCREFQAEELCLAGIVSLLKSLDPSGLRRGDLRFNNLGLGGLSLVLPHLSRFLGLRSLRLPYSNVDVRRPTPELVLGIRCLARELGKLQSLRELNLGSSRLSGNLRHILCKLQAPLESLELAFCSLLPADFAFLSQSFHAPALKRLDLSGHDFSQSLLEPLRQLLEETSASLLHLDLMECRLTDSHLDALLVSLRHCSCLRSLGLFGXSFSTAGLKDLLWKTVVLPDLRLVVYPIPVDCYKSGLDPGWILEEQLDRNVWGAVSAELXRMLESFGRADIVWTSNPYGHEALDYFCLVAGEELGAFSLEKCCGLSASFLKELCFDLILVFFLLSSGFFASSQWFSTSSQCFPVTFVTTLSPAIAGTRPDVTGNLPNSANEHWILINY
SIO_010081: LOC116779917
subclass of: SO_0000673
so part of: LOC116779917
location: complement(join(728051..728247,729161..729790,730670..731294,731386..731683))
location: region:728051-731683:-1
so has part: feature:731386-731683:-1:exon
so has part: feature:730670-731294:-1:exon
so has part: feature:729161-729790:-1:exon
so has part: feature:728051-728247:-1:exon

XP_032530320.1
type: Protein
SIO_000068: ncbiprotein

position:728051:-1
position: 728051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:731683:-1
position: 731683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:731386-731683:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:730670-731294:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:729161-729790:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:728051-728247:-1:exon