Chiroxiphia lanceolata isolate bChiLan1 chromosome 30, bChiLan1.pri, whole genome shotgun sequence.
type: Entry
definition: Chiroxiphia lanceolata isolate bChiLan1 chromosome 30, bChiLan1.pri, whole genome shotgun sequence.
sequence version: NC_045666.1
sequence date: 2020-02-29
sequence: sequence
division: CON
label: NC_045666.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA603801
dblink: SAMN12620979
keyword: WGS
keyword: RefSeq
source: Chiroxiphia lanceolata (lance-tailed manakin)
organism: Chiroxiphia lanceolata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Pipridae; Chiroxiphia.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020562.1.\nAssembly name: bChiLan1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/01/03. The original whole-genome shotgun project has the\naccession WNMC00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 08-OCT-2019\nAssembly Method :: FALCON v. DNANexus 1.9.0; FALCON-Unzip v.\n DNANexus 1.0.6; purge_haplotigs v.\n v1.0.3+ 1.Nov.2018; scaff10x v. 4.1.0;\n Bionano Solve DLS v. 3.2.1; Salsa HiC v.\n 2.2; Arrow smrtanalysis Pacbio polishing\n & gap filling v. 6.0.0.47841; longranger\n align v. 2.2.2; freebayes Illumina\n polishing v. 1.3.1; gEVAL manual curation\n v. 2019-10-08; VGP assembly pipeline v.\n 1.5\nAssembly Name :: bChiLan1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 67.75x\nSequencing Technology :: PacBio Sequel I CLR; llumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Chiroxiphia lanceolata Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 2418199
topology: linear
so has quality: SO_0000987
location: 1..2418199
location: region:1-2418199:1
RO_0002162: 296741

NC_045666
type: RefSeq
SIO_000068: refseq

PRJNA603801
type: BioProject
SIO_000068: bioproject

SAMN12620979
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2418199:1
position: 2418199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-2418199:1:source
so part of: sequence
organism: Chiroxiphia lanceolata
mol type: genomic DNA
isolate: bChiLan1
chromosome: 30
sex: female
tissue type: isolated red blood cells
dev stage: adult
country: Panama: Isla Boca Btava
lat lon: 8.2166658 N 82.2666656 W
collection date: 14-Apr-2017
collected by: Emily DuVal

296741
type: Taxonomy
SIO_000068: taxonomy

LOC116799991
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116799991
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 69597..78281
location: region:69597-78281:1
so has part: feature:69597-78281:1:exon
subclass of: SO_0000011

116799991
type: Gene
SIO_000068: ncbigene

position:69597:1
position: 69597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78281:1
position: 78281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69597-78281:1:exon

LOC116799991
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116799991
product: uncharacterized LOC116799991
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004361152.1
SIO_010081: LOC116799991
subclass of: SO_0000673
so part of: LOC116799991
location: join(69597..69832,73903..73908,78271..78281)
location: region:69597-78281:1
so has part: feature:69597-69832:1:exon
so has part: feature:73903-73908:1:exon
so has part: feature:78271-78281:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:69597-69832:1:exon

position:69832:1
position: 69832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:73903-73908:1:exon

position:73903:1
position: 73903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73908:1
position: 73908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:78271-78281:1:exon

position:78271:1
position: 78271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116799955
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116799955
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 89112..96859
location: region:89112-96859:1
so has part: feature:89112-96859:1:exon
subclass of: SO_0000010

116799955
type: Gene
SIO_000068: ncbigene

position:89112:1
position: 89112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96859:1
position: 96859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89112-96859:1:exon

LOC116799955
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116799955
product: leucine-rich repeat LGI family member 4-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032713425.1
SIO_010081: LOC116799955
subclass of: SO_0000673
so part of: LOC116799955
location: join(89112..89265,90048..90118,90690..90760,91147..91218,92008..92178,93120..93282,94099..94590,95699..96022,96070..96859)
location: region:89112-96859:1
so has part: feature:89112-89265:1:exon
so has part: feature:90048-90118:1:exon
so has part: feature:90690-90760:1:exon
so has part: feature:91147-91218:1:exon
so has part: feature:92008-92178:1:exon
so has part: feature:93120-93282:1:exon
so has part: feature:94099-94590:1:exon
so has part: feature:95699-96022:1:exon
so has part: feature:96070-96859:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:89112-89265:1:exon

position:89265:1
position: 89265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:90048-90118:1:exon

position:90048:1
position: 90048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90118:1
position: 90118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:90690-90760:1:exon

position:90690:1
position: 90690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90760:1
position: 90760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:91147-91218:1:exon

position:91147:1
position: 91147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91218:1
position: 91218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:92008-92178:1:exon

position:92008:1
position: 92008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92178:1
position: 92178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:93120-93282:1:exon

position:93120:1
position: 93120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93282:1
position: 93282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:94099-94590:1:exon

position:94099:1
position: 94099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94590:1
position: 94590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:95699-96022:1:exon

position:95699:1
position: 95699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96022:1
position: 96022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:96070-96859:1:exon

position:96070:1
position: 96070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116799955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116799955
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: leucine-rich repeat LGI family member 4-like
translation: MWGGGFGAPLRGGGGCPGGCECDRESALCRGAPGGSPGAPPPPGHTVTGSVAHRGPGRGQLPPHPDPQLLLVTAGSLGTIGDGAFLDWCYWSTCSSRTTRSGPSNPPPCGASGGSCSWTCGGTHSAVIVACGGSCRGWGQSPPPPRLLGAAAAPPPQGTPLAHLDPRDFQCQQTELRPFQSLPFSSLGAESFTLGGTRGWPWPSPLPVPAPSWSGTNWREVPGPHHHQQSSPVACHHCPWWVPLVVVAQLGVPGSGAALVALGPPLFARASDGAAASPPRRGHARLGGHLYLGVADSSKGGTSTVFRWGGXGFYPHQTLRAWHRDTHLEFLELAGPSTRGVFRGQETPRYRWSGGVFTPHTDIPHVPDVYAAKHFRLRGHVFLCLTRFLGDAKVMRWEGSMFREIQQVPARGSMIFQPLTLSGHRYVLLGNDFAXSRVFRLGPEGHLEPTQELLVPTPAPLSLSPLATGTSLWPLASKGHPYLPAHDIDLEA
SIO_010081: LOC116799955
subclass of: SO_0000673
so part of: LOC116799955
location: join(89128..89265,90048..90118,90690..90760,91147..91218,92008..92178,93120..93282,94099..94590,95699..95997)
location: region:89128-95997:1
so has part: feature:89128-89265:1:exon
so has part: feature:90048-90118:1:exon
so has part: feature:90690-90760:1:exon
so has part: feature:91147-91218:1:exon
so has part: feature:92008-92178:1:exon
so has part: feature:93120-93282:1:exon
so has part: feature:94099-94590:1:exon
so has part: feature:95699-95997:1:exon

XP_032569316.1
type: Protein
SIO_000068: ncbiprotein

position:89128:1
position: 89128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95997:1
position: 95997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89128-89265:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90048-90118:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90690-90760:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91147-91218:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:92008-92178:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:93120-93282:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:94099-94590:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:95699-95997:1:exon

LOC116799956
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116799956
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 110238..123710
location: region:110238-123710:1
so has part: feature:110238-123710:1:exon
subclass of: SO_0000010

116799956
type: Gene
SIO_000068: ncbigene

position:110238:1
position: 110238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123710:1
position: 123710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110238-123710:1:exon

LOC116799956
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116799956
product: zinc finger protein 239-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032713426.1
SIO_010081: LOC116799956
subclass of: SO_0000673
so part of: LOC116799956
location: join(110238..110323,121728..121798,121981..123710)
location: region:110238-123710:1
so has part: feature:110238-110323:1:exon
so has part: feature:121728-121798:1:exon
so has part: feature:121981-123710:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110238-110323:1:exon

position:110323:1
position: 110323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:121728-121798:1:exon

position:121728:1
position: 121728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121798:1
position: 121798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:121981-123710:1:exon

position:121981:1
position: 121981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116799956
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116799956
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 239-like
translation: MEEEAVRKMPQDTQAGPKLRTESTEDKSLQQSLVGESVLNGSTAQEVTGEEKPQRYPTRRGSKPSPGCSQEERPSLCREGGWSLSQSSDLVVPEQPPSREKPFRCLECGKNFSHNCNLIRHQMIHRGKRPYRCLECGKSFRKSSSLISHQNIHTVEKPYKCLECRKSFNHRSELVRHQSIHTREKPYKCLECGKSVSHSSSLIRHQMIHTGERPYKCLECGKSFRDSSTLLRHQQIHTREKPYKSLERGKSFNHSSELVRHQSIRTGEKPYKCLECGKSVSHSSSLIRHQMIHTWERPYKCLECGKSFRDSSTLLRHQQIHTREKPYKSLKCRKSFSHSW
SIO_010081: LOC116799956
subclass of: SO_0000673
so part of: LOC116799956
location: join(121753..121798,121981..122957)
location: region:121753-122957:1
so has part: feature:121753-121798:1:exon
so has part: feature:121981-122957:1:exon

XP_032569317.1
type: Protein
SIO_000068: ncbiprotein

position:121753:1
position: 121753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122957:1
position: 122957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121753-121798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:121981-122957:1:exon

LOC116799957
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116799957
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 127801..132987
location: region:127801-132987:1
so has part: feature:127801-132987:1:exon
subclass of: SO_0000010

116799957
type: Gene
SIO_000068: ncbigene

position:127801:1
position: 127801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132987:1
position: 132987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127801-132987:1:exon

LOC116799957
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116799957
product: natterin-3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032713427.1
SIO_010081: LOC116799957
subclass of: SO_0000673
so part of: LOC116799957
location: join(127801..127817,128937..129060,129934..130013,130801..130844,131097..131187,131756..132987)
location: region:127801-132987:1
so has part: feature:127801-127817:1:exon
so has part: feature:128937-129060:1:exon
so has part: feature:129934-130013:1:exon
so has part: feature:130801-130844:1:exon
so has part: feature:131097-131187:1:exon
so has part: feature:131756-132987:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:127801-127817:1:exon

position:127817:1
position: 127817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:128937-129060:1:exon

position:128937:1
position: 128937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129060:1
position: 129060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:129934-130013:1:exon

position:129934:1
position: 129934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130013:1
position: 130013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:130801-130844:1:exon

position:130801:1
position: 130801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130844:1
position: 130844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:131097-131187:1:exon

position:131097:1
position: 131097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131187:1
position: 131187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:131756-132987:1:exon

position:131756:1
position: 131756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116799957
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116799957
product: natterin-3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032713428.1
SIO_010081: LOC116799957
subclass of: SO_0000673
so part of: LOC116799957
location: join(128391..128626,128937..129060,129934..130013,130801..130844,131097..131187,131756..132987)
location: region:128391-132987:1
so has part: feature:128391-128626:1:exon
so has part: feature:128937-129060:1:exon
so has part: feature:129934-130013:1:exon
so has part: feature:130801-130844:1:exon
so has part: feature:131097-131187:1:exon
so has part: feature:131756-132987:1:exon

position:128391:1
position: 128391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128391-128626:1:exon

position:128626:1
position: 128626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:128937-129060:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:129934-130013:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:130801-130844:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:131097-131187:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131756-132987:1:exon

LOC116799957
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116799957
product: natterin-3-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032713429.1
SIO_010081: LOC116799957
subclass of: SO_0000673
so part of: LOC116799957
location: join(128391..128596,128937..129060,129934..130013,130801..130844,131097..131187,131756..132987)
location: region:128391-132987:1
so has part: feature:128391-128596:1:exon
so has part: feature:128937-129060:1:exon
so has part: feature:129934-130013:1:exon
so has part: feature:130801-130844:1:exon
so has part: feature:131097-131187:1:exon
so has part: feature:131756-132987:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:128391-128596:1:exon

position:128596:1
position: 128596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:128937-129060:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:129934-130013:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:130801-130844:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:131097-131187:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131756-132987:1:exon

LOC116799957
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116799957
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: natterin-3-like
translation: MELSCNSGSYDPVRGPYCYFPNRGQEKHTSNFNILVNAGSFEALDWVDDSFGTVPENAVESCPSVDVFMGRSRDGLGKVSKEHRVLFVALGGEEVWYKWYQVLVVKTGPSDISIVDVAYNLSTALEHSEDVVLAEAPAQNEGCGAAPGSTFLEEATETEHTWRSDHPALATVRGTLRAAPLVLTGPGWAVANVTSLPWVGGASITKFVSHGPHEVREEVPTRSECTAVLRGRRLDLQVMFTAQLRREFRDGVQHTVGVTGWAQTRVVTGVSARIEQCRELARVPPCPA
SIO_010081: LOC116799957
subclass of: SO_0000673
so part of: LOC116799957
location: 131889..132755
location: region:131889-132755:1
so has part: feature:131889-132755:1:exon

XP_032569318.1
type: Protein
SIO_000068: ncbiprotein

position:131889:1
position: 131889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132755:1
position: 132755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131889-132755:1:exon

LOC116799957
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116799957
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: natterin-3-like
translation: MELSCNSGSYDPVRGPYCYFPNRGQEKHTSNFNILVNAGSFEALDWVDDSFGTVPENAVESCPSVDVFMGRSRDGLGKVSKEHRVLFVALGGEEVWYKWYQVLVVKTGPSDISIVDVAYNLSTALEHSEDVVLAEAPAQNEGCGAAPGSTFLEEATETEHTWRSDHPALATVRGTLRAAPLVLTGPGWAVANVTSLPWVGGASITKFVSHGPHEVREEVPTRSECTAVLRGRRLDLQVMFTAQLRREFRDGVQHTVGVTGWAQTRVVTGVSARIEQCRELARVPPCPA
SIO_010081: LOC116799957
subclass of: SO_0000673
so part of: LOC116799957
location: 131889..132755
location: region:131889-132755:1
so has part: feature:131889-132755:1:exon

XP_032569319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131889-132755:1:exon

LOC116799957
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116799957
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: natterin-3-like
translation: MELSCNSGSYDPVRGPYCYFPNRGQEKHTSNFNILVNAGSFEALDWVDDSFGTVPENAVESCPSVDVFMGRSRDGLGKVSKEHRVLFVALGGEEVWYKWYQVLVVKTGPSDISIVDVAYNLSTALEHSEDVVLAEAPAQNEGCGAAPGSTFLEEATETEHTWRSDHPALATVRGTLRAAPLVLTGPGWAVANVTSLPWVGGASITKFVSHGPHEVREEVPTRSECTAVLRGRRLDLQVMFTAQLRREFRDGVQHTVGVTGWAQTRVVTGVSARIEQCRELARVPPCPA
SIO_010081: LOC116799957
subclass of: SO_0000673
so part of: LOC116799957
location: 131889..132755
location: region:131889-132755:1
so has part: feature:131889-132755:1:exon

XP_032569320.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131889-132755:1:exon

LOC116799905
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116799905
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(136649..143268)
location: region:136649-143268:-1
so has part: feature:136649-143268:-1:exon
subclass of: SO_0000010

116799905
type: Gene
SIO_000068: ncbigene

position:136649:-1
position: 136649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143268:-1
position: 143268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136649-143268:-1:exon

LOC116799905
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116799905
product: rho GTPase-activating protein 9-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 70% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032713367.1
SIO_010081: LOC116799905
subclass of: SO_0000673
so part of: LOC116799905
location: complement(join(136649..137115,140244..140338,141011..141069,141184..141246,142431..142577,142996..143268))
location: region:136649-143268:-1
so has part: feature:142996-143268:-1:exon
so has part: feature:142431-142577:-1:exon
so has part: feature:141184-141246:-1:exon
so has part: feature:141011-141069:-1:exon
so has part: feature:140244-140338:-1:exon
so has part: feature:136649-137115:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:142996-143268:-1:exon

position:142996:-1
position: 142996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:142431-142577:-1:exon

position:142431:-1
position: 142431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142577:-1
position: 142577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:141184-141246:-1:exon

position:141184:-1
position: 141184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141246:-1
position: 141246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:141011-141069:-1:exon

position:141011:-1
position: 141011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141069:-1
position: 141069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:140244-140338:-1:exon

position:140244:-1
position: 140244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140338:-1
position: 140338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:136649-137115:-1:exon

position:137115:-1
position: 137115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116799905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116799905
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 9-like
translation: MLPGRRWRRAGPAVPLRALFGYRYRAEDGREVAMAAGERLLLLRRATPDWWQVRRPGDPPWARPFFVPATYVAEEEPGDSGTRSPRTPGQPAWGGGSAARRRTCVPPPRPPPRAVGTGTGQLAGGVIPTPAQCQSQQDTGGRPLSAEPPRTTAGQSPGGVGQVTHDGSLAHHSPEDWGADLAQAAAPQEQRGFMGGCPGLNPDSTEQQEGPPGSADHKQAFFVSTKPVNRCPLK
SIO_010081: LOC116799905
subclass of: SO_0000673
so part of: LOC116799905
location: complement(join(137048..137115,140244..140338,141011..141069,141184..141246,142431..142577,142996..143268))
location: region:137048-143268:-1
so has part: feature:142996-143268:-1:exon
so has part: feature:142431-142577:-1:exon
so has part: feature:141184-141246:-1:exon
so has part: feature:141011-141069:-1:exon
so has part: feature:140244-140338:-1:exon
so has part: feature:137048-137115:-1:exon

XP_032569258.1
type: Protein
SIO_000068: ncbiprotein

position:137048:-1
position: 137048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142996-143268:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:142431-142577:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:141184-141246:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:141011-141069:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:140244-140338:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:137048-137115:-1:exon

LETMD1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LETMD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(143642..148744)
location: region:143642-148744:-1
so has part: feature:143642-148744:-1:exon
subclass of: SO_0000010

116799906
type: Gene
SIO_000068: ncbigene

position:143642:-1
position: 143642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148744:-1
position: 148744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143642-148744:-1:exon

LETMD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LETMD1
product: LETM1 domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 16 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032713368.1
SIO_010081: LETMD1
subclass of: SO_0000673
so part of: LETMD1
location: complement(join(143642..144937,145383..145479,145729..145881,146311..146412,146498..146684,147400..147482,147655..147770,147888..148054,148635..148744))
location: region:143642-148744:-1
so has part: feature:148635-148744:-1:exon
so has part: feature:147888-148054:-1:exon
so has part: feature:147655-147770:-1:exon
so has part: feature:147400-147482:-1:exon
so has part: feature:146498-146684:-1:exon
so has part: feature:146311-146412:-1:exon
so has part: feature:145729-145881:-1:exon
so has part: feature:145383-145479:-1:exon
so has part: feature:143642-144937:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:148635-148744:-1:exon

position:148635:-1
position: 148635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:147888-148054:-1:exon

position:147888:-1
position: 147888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148054:-1
position: 148054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:147655-147770:-1:exon

position:147655:-1
position: 147655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147770:-1
position: 147770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:147400-147482:-1:exon

position:147400:-1
position: 147400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147482:-1
position: 147482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:146498-146684:-1:exon

position:146498:-1
position: 146498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146684:-1
position: 146684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:146311-146412:-1:exon

position:146311:-1
position: 146311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146412:-1
position: 146412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:145729-145881:-1:exon

position:145729:-1
position: 145729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145881:-1
position: 145881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:145383-145479:-1:exon

position:145383:-1
position: 145383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145479:-1
position: 145479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:143642-144937:-1:exon

position:144937:-1
position: 144937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LETMD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LETMD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LETM1 domain-containing protein 1
translation: MALSRAAARGVLWRLGPAALGPRRGRIELLPALGALRCQVCRSQERPLSSRATSRALVAAVAAVARRVNARYERYLERSFPRFYVLYSTFTSGIQALFLEVKEIGRIRFRMSRQRLQVQQLPYRDMERLRQFRRDALKAIPIGIIAIPPFANFLVIILMYFFPRQLLIRYFWTPQQQLEFLDVYDSIRRDSYPDVVRSLALAAQSLPEPRPRELLQQLCSQVQGGARPRLAQLLAVRSLFSGSPLVLNRLQVDHVRALSQVLFLTPHLPAVLLRHRLLSHILEIRHLDRALLRLGLGQLSEEELRAACYLRGLNSTHLGRADCRAWLEQWLQLSCELQASEASLLAHSMVLLSLNYSRPSE
SIO_010081: LETMD1
subclass of: SO_0000673
so part of: LETMD1
location: complement(join(144867..144937,145383..145479,145729..145881,146311..146412,146498..146684,147400..147482,147655..147770,147888..148054,148635..148744))
location: region:144867-148744:-1
so has part: feature:148635-148744:-1:exon
so has part: feature:147888-148054:-1:exon
so has part: feature:147655-147770:-1:exon
so has part: feature:147400-147482:-1:exon
so has part: feature:146498-146684:-1:exon
so has part: feature:146311-146412:-1:exon
so has part: feature:145729-145881:-1:exon
so has part: feature:145383-145479:-1:exon
so has part: feature:144867-144937:-1:exon

XP_032569259.1
type: Protein
SIO_000068: ncbiprotein

position:144867:-1
position: 144867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148635-148744:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147888-148054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147655-147770:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:147400-147482:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:146498-146684:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:146311-146412:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:145729-145881:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:145383-145479:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:144867-144937:-1:exon

LOC116799981
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116799981
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(152198..153010)
location: region:152198-153010:-1
so has part: feature:152198-153010:-1:exon
subclass of: SO_0000011

116799981
type: Gene
SIO_000068: ncbigene

position:152198:-1
position: 152198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153010:-1
position: 153010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152198-153010:-1:exon

LOC116799981
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116799981
product: uncharacterized LOC116799981
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004361151.1
SIO_010081: LOC116799981
subclass of: SO_0000673
so part of: LOC116799981
location: complement(join(152198..152384,152550..152770,152883..153010))
location: region:152198-153010:-1
so has part: feature:152883-153010:-1:exon
so has part: feature:152550-152770:-1:exon
so has part: feature:152198-152384:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:152883-153010:-1:exon

position:152883:-1
position: 152883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:152550-152770:-1:exon

position:152550:-1
position: 152550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152770:-1
position: 152770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:152198-152384:-1:exon

position:152384:-1
position: 152384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC11A2
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: SLC11A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 155734..169116
location: region:155734-169116:1
so has part: feature:155734-169116:1:exon
subclass of: SO_0000010

116799980
type: Gene
SIO_000068: ncbigene

position:155734:1
position: 155734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169116:1
position: 169116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155734-169116:1:exon

SLC11A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SLC11A2
product: solute carrier family 11 member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 long SRA reads, 16 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032713475.1
SIO_010081: SLC11A2
subclass of: SO_0000673
so part of: SLC11A2
location: join(155734..155820,156355..156525,157115..157263,158190..158315,158605..158724,159794..159900,160379..160449,160536..160603,161228..161383,161590..161748,162291..162377,162761..162880,163275..163424,163735..163811,163982..164135,165299..165352,168403..169116)
location: region:155734-169116:1
so has part: feature:155734-155820:1:exon
so has part: feature:156355-156525:1:exon
so has part: feature:157115-157263:1:exon
so has part: feature:158190-158315:1:exon
so has part: feature:158605-158724:1:exon
so has part: feature:159794-159900:1:exon
so has part: feature:160379-160449:1:exon
so has part: feature:160536-160603:1:exon
so has part: feature:161228-161383:1:exon
so has part: feature:161590-161748:1:exon
so has part: feature:162291-162377:1:exon
so has part: feature:162761-162880:1:exon
so has part: feature:163275-163424:1:exon
so has part: feature:163735-163811:1:exon
so has part: feature:163982-164135:1:exon
so has part: feature:165299-165352:1:exon
so has part: feature:168403-169116:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:155734-155820:1:exon

position:155820:1
position: 155820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:156355-156525:1:exon

position:156355:1
position: 156355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156525:1
position: 156525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:157115-157263:1:exon

position:157115:1
position: 157115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157263:1
position: 157263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:158190-158315:1:exon

position:158190:1
position: 158190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158315:1
position: 158315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:158605-158724:1:exon

position:158605:1
position: 158605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158724:1
position: 158724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:159794-159900:1:exon

position:159794:1
position: 159794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159900:1
position: 159900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:160379-160449:1:exon

position:160379:1
position: 160379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160449:1
position: 160449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:160536-160603:1:exon

position:160536:1
position: 160536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160603:1
position: 160603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:161228-161383:1:exon

position:161228:1
position: 161228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161383:1
position: 161383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:161590-161748:1:exon

position:161590:1
position: 161590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161748:1
position: 161748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:162291-162377:1:exon

position:162291:1
position: 162291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162377:1
position: 162377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:162761-162880:1:exon

position:162761:1
position: 162761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162880:1
position: 162880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:163275-163424:1:exon

position:163275:1
position: 163275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163424:1
position: 163424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:163735-163811:1:exon

position:163735:1
position: 163735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163811:1
position: 163811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:163982-164135:1:exon

position:163982:1
position: 163982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164135:1
position: 164135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:165299-165352:1:exon

position:165299:1
position: 165299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165352:1
position: 165352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:168403-169116:1:exon

position:168403:1
position: 168403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC11A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SLC11A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: natural resistance-associated macrophage protein 2
translation: MSRGESGRESGTGSENRTGKDVSGEPGGLGGVVSTISSSRSPLQPPEDTEEEPFTTYFDSKIPIPEDETHSCFSFRKLWAFTGPGFLMSIAYLDPGNIESDLQSGAVAGFKLLWVLLLATVIGLLLQRLAARLGVVTGLHLAEVCNRQYHKFPRIILWLMVELAIIGSDMQEVIGSAIAINLLSVGKIPLWGGVLITIADTFVFLFLDKYGLRKLEAFFGFLITIMALTFGYEYITVKPNQEKVLQGLFIPYCKDCGTPQLEQAVGIVGAVIMPHNMYLHSALVKSRQVDRSNKRQVREANKYFFIESCIALFVSFIINIFVVAVFAEAFFNKTNADVNQVCVNSSSPHSSLFPNNNETLEVDIYKGGVVLGCYFGPAALYIWAIGILAAGQSSTMTGTYSGQFVMEGFLNLRWSRFARVLLTRSIAVTPTLFVAIFQDVEHLTGMNDFLNVLMSLQLPFALIPVLTFTSLPTVMHDFANGREFWKVAGGLLILLICCINMYFVVAYVKDLHNLGLYIGAAVLSVVYLSFVAYLTWLCLIALGASFLACGNTGHLGFAARPSSSSWDTWTPTPPSPGDPGTGIRSGSPRASSVTQRSRTDPQGPPGPRDPRPPARHSPGTRQEWSQDSRENGGIGIGRSCGARRVLGRPGPAL
SIO_010081: SLC11A2
subclass of: SO_0000673
so part of: SLC11A2
location: join(156468..156525,157115..157263,158190..158315,158605..158724,159794..159900,160379..160449,160536..160603,161228..161383,161590..161748,162291..162377,162761..162880,163275..163424,163735..163811,163982..164135,165299..165352,168403..168708)
location: region:156468-168708:1
so has part: feature:156468-156525:1:exon
so has part: feature:157115-157263:1:exon
so has part: feature:158190-158315:1:exon
so has part: feature:158605-158724:1:exon
so has part: feature:159794-159900:1:exon
so has part: feature:160379-160449:1:exon
so has part: feature:160536-160603:1:exon
so has part: feature:161228-161383:1:exon
so has part: feature:161590-161748:1:exon
so has part: feature:162291-162377:1:exon
so has part: feature:162761-162880:1:exon
so has part: feature:163275-163424:1:exon
so has part: feature:163735-163811:1:exon
so has part: feature:163982-164135:1:exon
so has part: feature:165299-165352:1:exon
so has part: feature:168403-168708:1:exon

XP_032569366.1
type: Protein
SIO_000068: ncbiprotein

position:156468:1
position: 156468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168708:1
position: 168708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156468-156525:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:157115-157263:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158190-158315:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:158605-158724:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:159794-159900:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:160379-160449:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:160536-160603:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:161228-161383:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:161590-161748:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:162291-162377:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:162761-162880:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:163275-163424:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:163735-163811:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:163982-164135:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:165299-165352:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:168403-168708:1:exon

TSFM
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: TSFM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(172697..176863)
location: region:172697-176863:-1
so has part: feature:172697-176863:-1:exon
subclass of: SO_0000010

116799907
type: Gene
SIO_000068: ncbigene

position:172697:-1
position: 172697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176863:-1
position: 176863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172697-176863:-1:exon

TSFM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: TSFM
product: Ts translation elongation factor, mitochondrial
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032713369.1
SIO_010081: TSFM
subclass of: SO_0000673
so part of: TSFM
location: complement(join(172697..173220,174453..174614,174815..174944,175104..175232,175803..175909,176857..176863))
location: region:172697-176863:-1
so has part: feature:176857-176863:-1:exon
so has part: feature:175803-175909:-1:exon
so has part: feature:175104-175232:-1:exon
so has part: feature:174815-174944:-1:exon
so has part: feature:174453-174614:-1:exon
so has part: feature:172697-173220:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:176857-176863:-1:exon

position:176857:-1
position: 176857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:175803-175909:-1:exon

position:175803:-1
position: 175803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175909:-1
position: 175909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:175104-175232:-1:exon

position:175104:-1
position: 175104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175232:-1
position: 175232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:174815-174944:-1:exon

position:174815:-1
position: 174815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174944:-1
position: 174944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:174453-174614:-1:exon

position:174453:-1
position: 174453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174614:-1
position: 174614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:172697-173220:-1:exon

position:173220:-1
position: 173220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TSFM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: TSFM
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: elongation factor Ts, mitochondrial
translation: MGARPPPRCGSRELRARTGQPVLRCREALERAGGDLRQAEAWLEAESRRRGWAQAVAPGAPRAREGLVGVLSEGSAAAMVEVNCETDFVARTPEFQQLVEMAARGSWGTARGLRAPRWGLGGLRWEVCGARGGFGGCQGGVGVPPDSPPQHLLREDELAQLRVGDKGDLLSDHLALAMGRLGERLSLCRAGWLRAPGGFVATYTHGWVPPGPPVAMGTYGALVACGGPGPGPPPAELRELGRRVAQHVVGLAPTALGTXEDELGGDGETRLLAQGTLLEPGVPLGRYLRDRGGLQVWDFLRFQCGEEPPEAVPRDPPAPPA
SIO_010081: TSFM
subclass of: SO_0000673
so part of: TSFM
location: complement(join(172790..173220,174453..174614,174815..174944,175104..175232,175803..175909,176857..176863))
location: region:172790-176863:-1
so has part: feature:176857-176863:-1:exon
so has part: feature:175803-175909:-1:exon
so has part: feature:175104-175232:-1:exon
so has part: feature:174815-174944:-1:exon
so has part: feature:174453-174614:-1:exon
so has part: feature:172790-173220:-1:exon

XP_032569260.1
type: Protein
SIO_000068: ncbiprotein

position:172790:-1
position: 172790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176857-176863:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:175803-175909:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:175104-175232:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:174815-174944:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:174453-174614:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:172790-173220:-1:exon

LOC116799977
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116799977
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(177568..178449)
location: region:177568-178449:-1
so has part: feature:177568-178449:-1:exon
subclass of: SO_0000010

116799977
type: Gene
SIO_000068: ncbigene

position:177568:-1
position: 177568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178449:-1
position: 178449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177568-178449:-1:exon

LOC116799977
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116799977
product: EEF1A lysine methyltransferase 3-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032713473.1
SIO_010081: LOC116799977
subclass of: SO_0000673
so part of: LOC116799977
location: complement(177568..178449)
location: region:177568-178449:-1
so has part: feature:177568-178449:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:177568-178449:-1:exon

LOC116799977
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116799977
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: EEF1A lysine methyltransferase 3-like
translation: MTLSYPGLLGSWGGSRCGAPHFAPGVYWGLGVPGGLGVPRSDRPVPEQGSEVTLTDRPAALPQLRENVXQNFPGGSPEGSRGGARGVRALRWGRDQRRFPPKFHLVLGSDIVYDPRAFPPLLGTLRTLVAPPGRALLSARRRGGDAGTPRFFGQMLPPFFRVQLLRRDPEGDIEIYGLTPREGGGEGEQLTGGRGGPEGD
SIO_010081: LOC116799977
subclass of: SO_0000673
so part of: LOC116799977
location: complement(177589..178191)
location: region:177589-178191:-1
so has part: feature:177589-178191:-1:exon

XP_032569364.1
type: Protein
SIO_000068: ncbiprotein

position:177589:-1
position: 177589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178191:-1
position: 178191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177589-178191:-1:exon

AQP5
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: AQP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(197546..204638)
location: region:197546-204638:-1
so has part: feature:197546-204638:-1:exon
subclass of: SO_0000010

116799978
type: Gene
SIO_000068: ncbigene

position:197546:-1
position: 197546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204638:-1
position: 204638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197546-204638:-1:exon

AQP5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: AQP5
product: aquaporin 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 60 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032713474.1
SIO_010081: AQP5
subclass of: SO_0000673
so part of: AQP5
location: complement(join(197546..197811,200581..200664,201619..201780,204261..204638))
location: region:197546-204638:-1
so has part: feature:204261-204638:-1:exon
so has part: feature:201619-201780:-1:exon
so has part: feature:200581-200664:-1:exon
so has part: feature:197546-197811:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:204261-204638:-1:exon

position:204261:-1
position: 204261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:201619-201780:-1:exon

position:201619:-1
position: 201619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201780:-1
position: 201780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:200581-200664:-1:exon

position:200581:-1
position: 200581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200664:-1
position: 200664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:197546-197811:-1:exon

position:197811:-1
position: 197811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AQP5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: AQP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aquaporin-5
translation: MRKEVLTLAFARAVFVEFLSTLIFVFIGLGSALKWPSALPSILQIALAFGLAIGSLVQAFGHISGAHINPAVTIAFLVGNQISFPRALLYVLAQLVGAIAGAGILYGVTPANTRGNLAVNALNNNTTPGQALVVEMILTFQLAACIFASTDNRRSGSGSPALSIGLSVTVGHLVGIYFTGCSMNPARSFGPAVVTRRFSPAHWVFWVGPILGASLASLLYFYVLVPYCMALSDRLAILRGTYEPEDDWEEQREERKKSMELTPP
SIO_010081: AQP5
subclass of: SO_0000673
so part of: AQP5
location: complement(join(197626..197811,200581..200664,201619..201780,204261..204623))
location: region:197626-204623:-1
so has part: feature:204261-204623:-1:exon
so has part: feature:201619-201780:-1:exon
so has part: feature:200581-200664:-1:exon
so has part: feature:197626-197811:-1:exon

XP_032569365.1
type: Protein
SIO_000068: ncbiprotein

position:197626:-1
position: 197626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204623:-1
position: 204623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204261-204623:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:201619-201780:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:200581-200664:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:197626-197811:-1:exon

LOC116800004
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116800004
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 214710..220204
location: region:214710-220204:1
so has part: feature:214710-220204:1:exon
subclass of: SO_0000010

116800004
type: Gene
SIO_000068: ncbigene

position:214710:1
position: 214710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220204:1
position: 220204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214710-220204:1:exon

LOC116800004
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116800004
product: exendin-3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032713507.1
SIO_010081: LOC116800004
subclass of: SO_0000673
so part of: LOC116800004
location: join(214710..214749,217266..217369,217743..217889,219984..220204)
location: region:214710-220204:1
so has part: feature:214710-214749:1:exon
so has part: feature:217266-217369:1:exon
so has part: feature:217743-217889:1:exon
so has part: feature:219984-220204:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:214710-214749:1:exon

position:214749:1
position: 214749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:217266-217369:1:exon

position:217266:1
position: 217266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217369:1
position: 217369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:217743-217889:1:exon

position:217743:1
position: 217743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217889:1
position: 217889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:219984-220204:1:exon

position:219984:1
position: 219984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116800004
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116800004
product: exendin-3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032713508.1
SIO_010081: LOC116800004
subclass of: SO_0000673
so part of: LOC116800004
location: join(214710..214749,217266..217369,217743..217889,218341..218384)
location: region:214710-218384:1
so has part: feature:214710-214749:1:exon
so has part: feature:217266-217369:1:exon
so has part: feature:217743-217889:1:exon
so has part: feature:218341-218384:1:exon

position:218384:1
position: 218384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214710-214749:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:217266-217369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217743-217889:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:218341-218384:1:exon

position:218341:1
position: 218341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116800004
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116800004
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exendin-3-like isoform X1
translation: MVQWLFLTGLVLALLFPPGIQAAPEGLDGPSSRNSDGSRSSQNFPSDAKRHSEGTFSSDFTRFLDRMKAKEFVHWLIQGRRYN
SIO_010081: LOC116800004
subclass of: SO_0000673
so part of: LOC116800004
location: join(217275..217369,217743..217889,219984..219993)
location: region:217275-219993:1
so has part: feature:217275-217369:1:exon
so has part: feature:217743-217889:1:exon
so has part: feature:219984-219993:1:exon

XP_032569398.1
type: Protein
SIO_000068: ncbiprotein

position:217275:1
position: 217275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219993:1
position: 219993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217275-217369:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:217743-217889:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:219984-219993:1:exon

LOC116800004
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116800004
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exendin-3-like isoform X2
translation: MVQWLFLTGLVLALLFPPGIQAAPEGLDGPSSRNSDGSRSSQNFPSDAKRHSEGTFSSDFTRFLDRMKAKEFVHWLIQGRSIP
SIO_010081: LOC116800004
subclass of: SO_0000673
so part of: LOC116800004
location: join(217275..217369,217743..217889,218341..218350)
location: region:217275-218350:1
so has part: feature:217275-217369:1:exon
so has part: feature:217743-217889:1:exon
so has part: feature:218341-218350:1:exon

XP_032569399.1
type: Protein
SIO_000068: ncbiprotein

position:218350:1
position: 218350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217275-217369:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:217743-217889:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218341-218350:1:exon

GALNT6
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: GALNT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 234719..249797
location: region:234719-249797:1
so has part: feature:234719-249797:1:exon
subclass of: SO_0000010

116799987
type: Gene
SIO_000068: ncbigene

position:234719:1
position: 234719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249797:1
position: 249797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234719-249797:1:exon

GALNT6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: GALNT6
product: polypeptide N-acetylgalactosaminyltransferase 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032713484.1
SIO_010081: GALNT6
subclass of: SO_0000673
so part of: GALNT6
location: join(234719..235215,237977..238149,240533..240682,241699..241933,243373..243490,244691..244891,245699..245830,247721..247822,247936..248088,249470..249797)
location: region:234719-249797:1
so has part: feature:234719-235215:1:exon
so has part: feature:237977-238149:1:exon
so has part: feature:240533-240682:1:exon
so has part: feature:241699-241933:1:exon
so has part: feature:243373-243490:1:exon
so has part: feature:244691-244891:1:exon
so has part: feature:245699-245830:1:exon
so has part: feature:247721-247822:1:exon
so has part: feature:247936-248088:1:exon
so has part: feature:249470-249797:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:234719-235215:1:exon

position:235215:1
position: 235215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:237977-238149:1:exon

position:237977:1
position: 237977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238149:1
position: 238149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:240533-240682:1:exon

position:240533:1
position: 240533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240682:1
position: 240682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:241699-241933:1:exon

position:241699:1
position: 241699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241933:1
position: 241933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:243373-243490:1:exon

position:243373:1
position: 243373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243490:1
position: 243490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:244691-244891:1:exon

position:244691:1
position: 244691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244891:1
position: 244891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:245699-245830:1:exon

position:245699:1
position: 245699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245830:1
position: 245830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:247721-247822:1:exon

position:247721:1
position: 247721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247822:1
position: 247822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:247936-248088:1:exon

position:247936:1
position: 247936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248088:1
position: 248088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:249470-249797:1:exon

position:249470:1
position: 249470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GALNT6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: GALNT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polypeptide N-acetylgalactosaminyltransferase 6
translation: MRLFRRRSGPLKAALAGAAFLLLFLFTVPRDAARRERGEEEPWLRNIAQGKAQVLDLMLGAVHNLRDSMPKLQIGAPQPPREPLPRGGRSCPPGVYTAAELRPLLERPPQDPASPGADGKPFKKERWSPEESREKEKGYEKHCFNAFASDRISLQRALGPDSRPPECIDQKFKRCPPLPSTSVVIVFHNEAWSTLLRTVYSVLHSAPASLLREVILVDDASTDEYLKEELDRYVEQLQIVRVVRQRERKGLITARLLGASVASGDVLTFLDAHCECFQGWLEPLLSRIAHEPRAVVSPDIATIDLHTFEFSKPVPGGKQHSRGNFDWSLTFGWELLPARERQRRKDETFPIKSPTFAGGLFAISRSYFEHLGSYDDQMEIWGGENVEMSFRVWQCGGQVEIIPCSVVGHVFRSRSPHTFPKGTQVISRNQVRLAEVWMDDYKEIFYRRNQQAAQMAREKSFGDITERLRLRERLHCRNFTWYLQNVYPEMFVPDLTPTFYGAIKNEGTKSCLDVGENNHGGKPLIMYPCHGLGGNQYFEYTSQRELRHNIGRELCLRAGPGPAELGECQFRGKPGRVPANEEWELGQNRLIKNLASGSCLTARGPHPALVPCDLTDPHQLWAFT
SIO_010081: GALNT6
subclass of: SO_0000673
so part of: GALNT6
location: join(234719..235215,237977..238149,240533..240682,241699..241933,243373..243490,244691..244891,245699..245830,247721..247822,247936..248088,249470..249583)
location: region:234719-249583:1
so has part: feature:234719-235215:1:exon
so has part: feature:237977-238149:1:exon
so has part: feature:240533-240682:1:exon
so has part: feature:241699-241933:1:exon
so has part: feature:243373-243490:1:exon
so has part: feature:244691-244891:1:exon
so has part: feature:245699-245830:1:exon
so has part: feature:247721-247822:1:exon
so has part: feature:247936-248088:1:exon
so has part: feature:249470-249583:1:exon

XP_032569375.1
type: Protein
SIO_000068: ncbiprotein

position:249583:1
position: 249583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234719-235215:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237977-238149:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:240533-240682:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:241699-241933:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:243373-243490:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:244691-244891:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:245699-245830:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:247721-247822:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:247936-248088:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:249470-249583:1:exon

LOC116799908
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116799908
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(267072..295434)
location: region:267072-295434:-1
so has part: feature:267072-295434:-1:exon
subclass of: SO_0000010

116799908
type: Gene
SIO_000068: ncbigene

position:267072:-1
position: 267072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295434:-1
position: 295434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267072-295434:-1:exon

LOC116799908
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116799908
product: coiled-coil domain-containing protein 180-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032713370.1
SIO_010081: LOC116799908
subclass of: SO_0000673
so part of: LOC116799908
location: complement(join(267072..267378,268751..268889,269787..269892,270135..270246,271263..271400,272193..272353,272776..272917,273114..273180,274076..274150,275052..275130,275506..275576,276383..276582,277220..277333,277677..277775,278204..278320,278529..278673,278933..279079,279610..279790,280877..281052,281557..281774,282339..282544,283149..283212,283478..283604,285022..285137,285658..285831,286471..286590,287054..287142,287819..287898,288551..288670,288848..289011,294759..295163,295396..295434))
location: region:267072-295434:-1
so has part: feature:295396-295434:-1:exon
so has part: feature:294759-295163:-1:exon
so has part: feature:288848-289011:-1:exon
so has part: feature:288551-288670:-1:exon
so has part: feature:287819-287898:-1:exon
so has part: feature:287054-287142:-1:exon
so has part: feature:286471-286590:-1:exon
so has part: feature:285658-285831:-1:exon
so has part: feature:285022-285137:-1:exon
so has part: feature:283478-283604:-1:exon
so has part: feature:283149-283212:-1:exon
so has part: feature:282339-282544:-1:exon
so has part: feature:281557-281774:-1:exon
so has part: feature:280877-281052:-1:exon
so has part: feature:279610-279790:-1:exon
so has part: feature:278933-279079:-1:exon
so has part: feature:278529-278673:-1:exon
so has part: feature:278204-278320:-1:exon
so has part: feature:277677-277775:-1:exon
so has part: feature:277220-277333:-1:exon
so has part: feature:276383-276582:-1:exon
so has part: feature:275506-275576:-1:exon
so has part: feature:275052-275130:-1:exon
so has part: feature:274076-274150:-1:exon
so has part: feature:273114-273180:-1:exon
so has part: feature:272776-272917:-1:exon
so has part: feature:272193-272353:-1:exon
so has part: feature:271263-271400:-1:exon
so has part: feature:270135-270246:-1:exon
so has part: feature:269787-269892:-1:exon
so has part: feature:268751-268889:-1:exon
so has part: feature:267072-267378:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:295396-295434:-1:exon

position:295396:-1
position: 295396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:294759-295163:-1:exon

position:294759:-1
position: 294759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295163:-1
position: 295163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:288848-289011:-1:exon

position:288848:-1
position: 288848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289011:-1
position: 289011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:288551-288670:-1:exon

position:288551:-1
position: 288551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288670:-1
position: 288670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:287819-287898:-1:exon

position:287819:-1
position: 287819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287898:-1
position: 287898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:287054-287142:-1:exon

position:287054:-1
position: 287054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287142:-1
position: 287142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:286471-286590:-1:exon

position:286471:-1
position: 286471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286590:-1
position: 286590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:285658-285831:-1:exon

position:285658:-1
position: 285658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285831:-1
position: 285831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:285022-285137:-1:exon

position:285022:-1
position: 285022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285137:-1
position: 285137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:283478-283604:-1:exon

position:283478:-1
position: 283478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283604:-1
position: 283604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:283149-283212:-1:exon

position:283149:-1
position: 283149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283212:-1
position: 283212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:282339-282544:-1:exon

position:282339:-1
position: 282339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282544:-1
position: 282544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:281557-281774:-1:exon

position:281557:-1
position: 281557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281774:-1
position: 281774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:280877-281052:-1:exon

position:280877:-1
position: 280877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281052:-1
position: 281052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:279610-279790:-1:exon

position:279610:-1
position: 279610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279790:-1
position: 279790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:278933-279079:-1:exon

position:278933:-1
position: 278933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279079:-1
position: 279079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:278529-278673:-1:exon

position:278529:-1
position: 278529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278673:-1
position: 278673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:278204-278320:-1:exon

position:278204:-1
position: 278204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278320:-1
position: 278320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:277677-277775:-1:exon

position:277677:-1
position: 277677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277775:-1
position: 277775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:277220-277333:-1:exon

position:277220:-1
position: 277220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277333:-1
position: 277333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:276383-276582:-1:exon

position:276383:-1
position: 276383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276582:-1
position: 276582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:275506-275576:-1:exon

position:275506:-1
position: 275506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275576:-1
position: 275576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:275052-275130:-1:exon

position:275052:-1
position: 275052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275130:-1
position: 275130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:274076-274150:-1:exon

position:274076:-1
position: 274076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274150:-1
position: 274150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:273114-273180:-1:exon

position:273114:-1
position: 273114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273180:-1
position: 273180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:272776-272917:-1:exon

position:272776:-1
position: 272776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272917:-1
position: 272917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:272193-272353:-1:exon

position:272193:-1
position: 272193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272353:-1
position: 272353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:271263-271400:-1:exon

position:271263:-1
position: 271263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271400:-1
position: 271400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:270135-270246:-1:exon

position:270135:-1
position: 270135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270246:-1
position: 270246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:269787-269892:-1:exon

position:269787:-1
position: 269787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269892:-1
position: 269892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:268751-268889:-1:exon

position:268751:-1
position: 268751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268889:-1
position: 268889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:267072-267378:-1:exon

position:267378:-1
position: 267378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116799908
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116799908
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 180-like
translation: MRKAGGDLETLEQFLPEPGEETRGEGPRVNPFGAREPRDRRNPPGSGAREPRNPRDCPGSAGIGGAGAAGSTGSTGSAGIGGAGGAGGAGSAGSAESAGIGAREPRNPRDCPGSAGIGGAEAAGAAGSTGSAGIGGTRIGLTPQCGSRNINRALLGNERAAAKLLFNLMKSELEKEKSHKLKWQERVKDWKLIQKNRVIQSFREFMASEEIQNPPAVKTEMENMIKEQTVLSERRLGVLQHLGTLLPPTDVKSERNEWYRTLENLNQSLDTHNAECVKKMRSKYELVLGKCQEKVQVCKMSLLDMNVCTVKDVEVVHSDMLHVTEELERRFEEELEHMDGDFKEMAKQHEQHCQGLYSYFQEAMALWDVHKLRLSQQESELQKKVDECRWEQDGIIQTMKVDLDIILEKMKMASCEEELKNYMEKALSSLDHIRTRNETLNQVVMDEVMAYPGAILQELVSYSVSISQHFNVKEIFKQNLQGEIASMVQDQSNTSVVQTGLEVHQQRAEWDNHLSQPLPEERDSCQRSGGETNPAEHEEILAQETEETEEDGESIPHKSEDTEHAEQGAVSNSSKAESAEKAMEIFSTASGNIYTALGVEEAGKTDITENYFTKYEKEESLPMYLKYVLLKETVFVKLKKKIRLCFFEHLEKWFAESLSKARVLVAAKTEELNSILLLHLQLHQQKQEEIQTKIYDVRAGELSLHKERLECHCEGLEEGLKKEKAEFHTFLDQLNNLHKNFGSRLRNLEYDLLHTPMTEQSAPSRNNLQSELHNHLESVGVTVRSYQHHLEEALGKLKRSNVDFLKTCRLFSEGGDFSSEEVKFFNSCLQKESKQIDSLESLIKTDVEKMESSCLEQATELIKQSEKKFADVSVGRAFVEKVQKSLRWLQQQIKSEVANSNLQSVTLESYLEKLQQKRDVCAHPTADKEASASEELYDFAKEVLKELKKRSQYLDCFLEKAVIPRATEDVPTLALDGMLQDSIAPAVQRESPRDESKRMVMGLDPEKFPVLNPSRMDTSALDDLAISVIQNLAGFVPPKQSPDLNQERKDGSRSVGPVKKKVSNARAAQTTKKSSLDETKAKKSEKKSTKSVPKDRTYQIFEKKPPKSDTFKGIIMNILWTGSNTLLDLGEDFYGEKTPQMGIPKYLPETFERWADKLRQKLLSYKRQADDYYNFCLREFRDQLKRFEEELSSVSRLAVDSLLREHEQKLSSSTAQIQHLFNRQLGEWEDMKTVHQRKLHYSLGHPNNSLQLEALYQEEINRQKDQTEGVHLNTKMLQDCAAECAQSFFSALAALTEKLLLELDETITVDDIQVAGTERPREKMSTLIHRKQTGLPPETSKAPQLIQRGRGTWPGIPETTLPEAPAYVLCRGTATVSTAQTPLGHLAVMDARQAAYQKYKCKLEQLFAQIKEESTAQLLAIQRWQEWWEQSIQKIKQLYL
SIO_010081: LOC116799908
subclass of: SO_0000673
so part of: LOC116799908
location: complement(join(267247..267378,268751..268889,269787..269892,270135..270246,271263..271400,272193..272353,272776..272917,273114..273180,274076..274150,275052..275130,275506..275576,276383..276582,277220..277333,277677..277775,278204..278320,278529..278673,278933..279079,279610..279790,280877..281052,281557..281774,282339..282544,283149..283212,283478..283604,285022..285137,285658..285831,286471..286590,287054..287142,287819..287898,288551..288670,288848..289011,294759..295163,295396..295434))
location: region:267247-295434:-1
so has part: feature:295396-295434:-1:exon
so has part: feature:294759-295163:-1:exon
so has part: feature:288848-289011:-1:exon
so has part: feature:288551-288670:-1:exon
so has part: feature:287819-287898:-1:exon
so has part: feature:287054-287142:-1:exon
so has part: feature:286471-286590:-1:exon
so has part: feature:285658-285831:-1:exon
so has part: feature:285022-285137:-1:exon
so has part: feature:283478-283604:-1:exon
so has part: feature:283149-283212:-1:exon
so has part: feature:282339-282544:-1:exon
so has part: feature:281557-281774:-1:exon
so has part: feature:280877-281052:-1:exon
so has part: feature:279610-279790:-1:exon
so has part: feature:278933-279079:-1:exon
so has part: feature:278529-278673:-1:exon
so has part: feature:278204-278320:-1:exon
so has part: feature:277677-277775:-1:exon
so has part: feature:277220-277333:-1:exon
so has part: feature:276383-276582:-1:exon
so has part: feature:275506-275576:-1:exon
so has part: feature:275052-275130:-1:exon
so has part: feature:274076-274150:-1:exon
so has part: feature:273114-273180:-1:exon
so has part: feature:272776-272917:-1:exon
so has part: feature:272193-272353:-1:exon
so has part: feature:271263-271400:-1:exon
so has part: feature:270135-270246:-1:exon
so has part: feature:269787-269892:-1:exon
so has part: feature:268751-268889:-1:exon
so has part: feature:267247-267378:-1:exon

XP_032569261.1
type: Protein
SIO_000068: ncbiprotein

position:267247:-1
position: 267247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295396-295434:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:294759-295163:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:288848-289011:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:288551-288670:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:287819-287898:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:287054-287142:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:286471-286590:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:285658-285831:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:285022-285137:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:283478-283604:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:283149-283212:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:282339-282544:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:281557-281774:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:280877-281052:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:279610-279790:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:278933-279079:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:278529-278673:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:278204-278320:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:277677-277775:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:277220-277333:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:276383-276582:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:275506-275576:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:275052-275130:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:274076-274150:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:273114-273180:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:272776-272917:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:272193-272353:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:271263-271400:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:270135-270246:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:269787-269892:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:268751-268889:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:267247-267378:-1:exon

LOC116800016
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116800016
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 295621..313725
location: region:295621-313725:1
so has part: feature:295621-313725:1:exon
subclass of: SO_0000010

116800016
type: Gene
SIO_000068: ncbigene

position:295621:1
position: 295621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313725:1
position: 313725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295621-313725:1:exon

LOC116800016
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116800016
product: keratin, type II cytoskeletal 8-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 209 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032713531.1
SIO_010081: LOC116800016
subclass of: SO_0000673
so part of: LOC116800016
location: join(295621..296252,298961..299169,302078..302138,302810..302905,304785..304949,307849..307974,311268..311488,313307..313362,313465..313725)
location: region:295621-313725:1
so has part: feature:295621-296252:1:exon
so has part: feature:298961-299169:1:exon
so has part: feature:302078-302138:1:exon
so has part: feature:302810-302905:1:exon
so has part: feature:304785-304949:1:exon
so has part: feature:307849-307974:1:exon
so has part: feature:311268-311488:1:exon
so has part: feature:313307-313362:1:exon
so has part: feature:313465-313725:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:295621-296252:1:exon

position:296252:1
position: 296252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:298961-299169:1:exon

position:298961:1
position: 298961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299169:1
position: 299169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:302078-302138:1:exon

position:302078:1
position: 302078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302138:1
position: 302138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:302810-302905:1:exon

position:302810:1
position: 302810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302905:1
position: 302905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:304785-304949:1:exon

position:304785:1
position: 304785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304949:1
position: 304949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:307849-307974:1:exon

position:307849:1
position: 307849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307974:1
position: 307974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:311268-311488:1:exon

position:311268:1
position: 311268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311488:1
position: 311488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:313307-313362:1:exon

position:313307:1
position: 313307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313362:1
position: 313362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:313465-313725:1:exon

position:313465:1
position: 313465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116800016
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116800016
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: keratin, type II cytoskeletal 8-like
translation: MSVSIPLRSGAAVPGRSFSSRSFSAGPALRMSSASAFGLSGGLRRGPGAFRGAGGVPGVPGVGITSVSVNRSLLTPLDVSVDPELQELRREEKEQIKTLNDKFAAFIDKVRFLEQQNKLLETKWGLLRAQPPPQSGLGGLLEGYAGTLRRQLEGLGQERQRLRAELGHVRGLVDEFKAKYEDEINHRTEKENEFVLLKKDVDEAYMAKVELESRLESLTDEINFLRQLYQEELQELRSQSSDTSVVLSMDNSRHLDMGGVLAEVRAQFEDIAGRSRAEAEGLYQGKYEELKLTAGKQGDDLRNTRSQIQELNRRIQRIQAEIDALKNQRSGLEAAVAEAEERGELALKDARAKLGGLEGALQQAKQDLARQLREYQELMNVKLALDIEIATYRKLLEGEESRLEAAVQTLSIHPKPSGYPGAFGGGFGGGFGGGFGGGFVSTGYSGPPPPPEGGTPPKSRAIVIKKIETRDGKLVSESSDVLES
SIO_010081: LOC116800016
subclass of: SO_0000673
so part of: LOC116800016
location: join(295926..296252,298961..299169,302078..302138,302810..302905,304785..304949,307849..307974,311268..311488,313307..313362,313465..313658)
location: region:295926-313658:1
so has part: feature:295926-296252:1:exon
so has part: feature:298961-299169:1:exon
so has part: feature:302078-302138:1:exon
so has part: feature:302810-302905:1:exon
so has part: feature:304785-304949:1:exon
so has part: feature:307849-307974:1:exon
so has part: feature:311268-311488:1:exon
so has part: feature:313307-313362:1:exon
so has part: feature:313465-313658:1:exon

XP_032569422.1
type: Protein
SIO_000068: ncbiprotein

position:295926:1
position: 295926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313658:1
position: 313658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295926-296252:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:298961-299169:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:302078-302138:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:302810-302905:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:304785-304949:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:307849-307974:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:311268-311488:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:313307-313362:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:313465-313658:1:exon

LOC116799909
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116799909
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 329201..338252
location: region:329201-338252:1
so has part: feature:329201-338252:1:exon
subclass of: SO_0000010

116799909
type: Gene
SIO_000068: ncbigene

position:329201:1
position: 329201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338252:1
position: 338252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329201-338252:1:exon

LOC116799909
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116799909
product: keratin, type II cytoskeletal 4-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 6 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 Proteins, and 27% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032713371.1
SIO_010081: LOC116799909
subclass of: SO_0000673
so part of: LOC116799909
location: join(329201..329686,331094..331311,333388..333460,334223..334317,335260..335420,336145..336270,336921..337140,337632..337666,337756..338252)
location: region:329201-338252:1
so has part: feature:329201-329686:1:exon
so has part: feature:331094-331311:1:exon
so has part: feature:333388-333460:1:exon
so has part: feature:334223-334317:1:exon
so has part: feature:335260-335420:1:exon
so has part: feature:336145-336270:1:exon
so has part: feature:336921-337140:1:exon
so has part: feature:337632-337666:1:exon
so has part: feature:337756-338252:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:329201-329686:1:exon

position:329686:1
position: 329686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:331094-331311:1:exon

position:331094:1
position: 331094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331311:1
position: 331311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:333388-333460:1:exon

position:333388:1
position: 333388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333460:1
position: 333460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:334223-334317:1:exon

position:334223:1
position: 334223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334317:1
position: 334317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:335260-335420:1:exon

position:335260:1
position: 335260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335420:1
position: 335420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:336145-336270:1:exon

position:336145:1
position: 336145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336270:1
position: 336270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:336921-337140:1:exon

position:336921:1
position: 336921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337140:1
position: 337140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:337632-337666:1:exon

position:337632:1
position: 337632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337666:1
position: 337666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:337756-338252:1:exon

position:337756:1
position: 337756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116799909
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116799909
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 6 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: keratin, type II cytoskeletal 4-like
translation: MSRQSCALGKSFGSSSVCFGGKTKVAFGGRGSCRGSGFGSRSVYSLGGSKSGALGGLGGAAGLCRGFGGGQGGFGGGAGFGGGFGGGSFPGGFGGFGGGFEAGLGGQGFPTCPPGGIREVTINQSLLAPLNLEIDPEIQRVRAQEREEMKQLNDKFASFIDKVRFLEQQNRVLETKWKLLQEQGGVGPGGRSLEPLFEAFVSALRRQLDSLSGEKLQLQSELKSSQDTVEEFKTKYEEEINKRTADENDFVSSRRSRPYDVDGAYMVKVELXGKVDSLLEEINFLKCLYEAELSQMQKTVSDTSVVLSMDNNREXDLDSIIAEVKAQYEDIANRSRAXGRGWYRGKYEELQVSAGKHGDSLRDTKAEISELNRMVQRIRAEIDSVKKQCETLQTSIADAEQRGEXALKDAQAKLAELESALQKAKADLARQLREHQELMNVKLALDVEIATYRKLLEGEECRMSGECQSSVSISVVGGSSSVGGGYGGGMCLGGGGIGFGSGKGGCSAGGAGLCFSLGGGGLGAGSGFGSAGSGFGSVGGGSSGGGGVRHPPEEQRLSRPEGVGTGSLPRPHSQHPRRKDGNSTESPRASRVLWNHPWDRGGEENTARPTAEDGDSQKHGQTHLLRMEIPKNTTRPTC
SIO_010081: LOC116799909
subclass of: SO_0000673
so part of: LOC116799909
location: join(329201..329686,331094..331311,333388..333460,334223..334317,335260..335420,336145..336270,336921..337140,337632..337666,337756..338252)
location: region:329201-338252:1
so has part: feature:329201-329686:1:exon
so has part: feature:331094-331311:1:exon
so has part: feature:333388-333460:1:exon
so has part: feature:334223-334317:1:exon
so has part: feature:335260-335420:1:exon
so has part: feature:336145-336270:1:exon
so has part: feature:336921-337140:1:exon
so has part: feature:337632-337666:1:exon
so has part: feature:337756-338252:1:exon

XP_032569262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:329201-329686:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:331094-331311:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:333388-333460:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:334223-334317:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:335260-335420:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:336145-336270:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:336921-337140:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:337632-337666:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:337756-338252:1:exon

LOC116800014
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116800014
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 344621..352482
location: region:344621-352482:1
so has part: feature:344621-352482:1:exon
subclass of: SO_0000010

116800014
type: Gene
SIO_000068: ncbigene

position:344621:1
position: 344621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352482:1
position: 352482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344621-352482:1:exon

LOC116800014
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116800014
product: keratin, type II cytoskeletal 6C-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 15 bases in 11 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 27% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032713529.1
SIO_010081: LOC116800014
subclass of: SO_0000673
so part of: LOC116800014
location: join(344621..345216,346386..346597,346779..346839,348588..348683,348817..348981,349921..350042,350811..351028,351951..351983,352087..352482)
location: region:344621-352482:1
so has part: feature:344621-345216:1:exon
so has part: feature:346386-346597:1:exon
so has part: feature:346779-346839:1:exon
so has part: feature:348588-348683:1:exon
so has part: feature:348817-348981:1:exon
so has part: feature:349921-350042:1:exon
so has part: feature:350811-351028:1:exon
so has part: feature:351951-351983:1:exon
so has part: feature:352087-352482:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:344621-345216:1:exon

position:345216:1
position: 345216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:346386-346597:1:exon

position:346386:1
position: 346386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346597:1
position: 346597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:346779-346839:1:exon

position:346779:1
position: 346779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346839:1
position: 346839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:348588-348683:1:exon

position:348588:1
position: 348588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348683:1
position: 348683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:348817-348981:1:exon

position:348817:1
position: 348817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348981:1
position: 348981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:349921-350042:1:exon

position:349921:1
position: 349921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350042:1
position: 350042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:350811-351028:1:exon

position:350811:1
position: 350811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351028:1
position: 351028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:351951-351983:1:exon

position:351951:1
position: 351951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351983:1
position: 351983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:352087-352482:1:exon

position:352087:1
position: 352087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116800014
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116800014
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 15 bases in 11 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:350940..350942,aa:OTHER)
product: LOW QUALITY PROTEIN: keratin, type II cytoskeletal 6C-like
translation: MSRQSVCRSFGGGSRRGFSSCSAMGGGFGGGRSRSSYSSYSMSRGFGAGGRCGGFGSRSLHGLGSGARISXGGCYGGRMGGFGGGYGGXGSFGGGMGGGGGGMCGFGGXGGGGGMGGFGAGVGGYGGGYGGPGFGGPGFGGPGFXHGGPGRAGPGIQPVQIDSTLRPVHVEIDPQIQQVKTQEKEQIKTLNNQFASFIDKVRFLEQQNKVLSTKXELLQQQGPSGPRKDLSVIFESYIQNLRRQLDSILAQXGQLESELQNMQQYVEEYKSKYKEEINRRTTAENEFVVLKKDVDSAYMTKVELEARVGALTDEINFLRAIYEEELAQMQTISRDLSVVVSMDNNRHLDLDSIIEEVRRQYEQIAQSSRAEAEAWYQSQYEQLQSTXGRHGDNLRNTKIEIQELTRNIQRLXVDIENVKKQNQHLQSAIAEAEERGEMALKDARIKLEELEAALSKDKEELAGCXRSTRRLNVKIALDVEIAMYRKLLEGEENRLCNDSMSNVNVSVVGRTTTVTGGRVGGXGGGFGGSGMGGGFGGAAXGRGFGGSGMGGGFGAAGWRGGWRIGGRIHGGGEGVCGGGGRKRLRGGSVGGSCGMGGGMYGGGFXSGSGRICGSGGGSSSVRRSVTTTSVKSSGVRF
SIO_010081: LOC116800014
subclass of: SO_0000673
so part of: LOC116800014
location: join(344621..345216,346386..346597,346779..346839,348588..348683,348817..348981,349921..350042,350811..351028,351951..351983,352087..352482)
location: region:344621-352482:1
so has part: feature:344621-345216:1:exon
so has part: feature:346386-346597:1:exon
so has part: feature:346779-346839:1:exon
so has part: feature:348588-348683:1:exon
so has part: feature:348817-348981:1:exon
so has part: feature:349921-350042:1:exon
so has part: feature:350811-351028:1:exon
so has part: feature:351951-351983:1:exon
so has part: feature:352087-352482:1:exon

XP_032569420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:344621-345216:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:346386-346597:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:346779-346839:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:348588-348683:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:348817-348981:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:349921-350042:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:350811-351028:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:351951-351983:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:352087-352482:1:exon

LOC116799910
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116799910
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 357646..364159
location: region:357646-364159:1
so has part: feature:357646-364159:1:exon
subclass of: SO_0000010

116799910
type: Gene
SIO_000068: ncbigene

position:357646:1
position: 357646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364159:1
position: 364159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357646-364159:1:exon

LOC116799910
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116799910
product: keratin, type II cytoskeletal 6C-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 6 bases in 5 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 163 Proteins, and 31% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032713372.1
SIO_010081: LOC116799910
subclass of: SO_0000673
so part of: LOC116799910
location: join(357646..358206,358978..359187,359303..359363,359596..359691,359848..360012,360124..360248,361233..361453,362172..362206,362309..362733,364028..364159)
location: region:357646-364159:1
so has part: feature:357646-358206:1:exon
so has part: feature:358978-359187:1:exon
so has part: feature:359303-359363:1:exon
so has part: feature:359596-359691:1:exon
so has part: feature:359848-360012:1:exon
so has part: feature:360124-360248:1:exon
so has part: feature:361233-361453:1:exon
so has part: feature:362172-362206:1:exon
so has part: feature:362309-362733:1:exon
so has part: feature:364028-364159:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:357646-358206:1:exon

position:358206:1
position: 358206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:358978-359187:1:exon

position:358978:1
position: 358978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359187:1
position: 359187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:359303-359363:1:exon

position:359303:1
position: 359303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359363:1
position: 359363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:359596-359691:1:exon

position:359596:1
position: 359596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359691:1
position: 359691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:359848-360012:1:exon

position:359848:1
position: 359848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360012:1
position: 360012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:360124-360248:1:exon

position:360124:1
position: 360124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360248:1
position: 360248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:361233-361453:1:exon

position:361233:1
position: 361233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361453:1
position: 361453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:362172-362206:1:exon

position:362172:1
position: 362172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362206:1
position: 362206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:362309-362733:1:exon

position:362309:1
position: 362309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362733:1
position: 362733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:364028-364159:1:exon

position:364028:1
position: 364028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116799910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116799910
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 6 bases in 5 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: keratin, type II cytoskeletal 6C-like
translation: MSRQSVCFGVGGRKGFSSCSAVGGGFGGGGGRSRISYSSYSSSRGGGGGGGGGGCGGFSSRSLHSVGGSRRVAMGGCYGGGYGGRMGGFGGGMSCGGMGMGMGMGGFGGGVGGAGGMGGFGGGMGGGGMGGFGGPGFPGPGIQPVQVDPSLLRPVHVEIDPQIQQVKTQEKEQIKTLNNQFASFIDKVRFLEQQNKVLSTKWELLQQQGPSGPRKNLDVIFESYIQNRRXLDSILAQRGQLESELQNMRQYVEEYKSKYEEEINRRTAAENEFVVLKKDVDCAYMTKVELEAKVGALTDEINFLRCIYEEELAQMQTISRDLSVVVSMDNNRHLDLDSIIEEVRRQYEQIAQSSRAEAEAWYQSRYEELQNTAGXHGDNLRNTKIEIQELSRNVQRLRAELENVKKQNQHLQSAIAEAEERGEMALKDARRKLEELECALSKDKEELARLLKEYQEMLNVKIALDVEIAMYRKLLEGEENRLCNDSSSNVNVSVVGRSSISGGRGGGMGGGFGGSCGXGGGFGGGSCGMGGGMAGGXCGGGGSGFGGGSCGMGGGMYGGGFSSGSGRICGXGGGSSSVRRCVTTTSVKSSGCGSEPRRAAAPLSRRQQPQPPDSQLGRPAVGRAASPPPGSAPLPGEIKEAENAVGVAQESHNSPRELPVSPERVRKLQTEGEVRDRQ
SIO_010081: LOC116799910
subclass of: SO_0000673
so part of: LOC116799910
location: join(357646..358206,358978..359187,359303..359363,359596..359691,359848..360012,360124..360248,361233..361453,362172..362206,362309..362733,364028..364159)
location: region:357646-364159:1
so has part: feature:357646-358206:1:exon
so has part: feature:358978-359187:1:exon
so has part: feature:359303-359363:1:exon
so has part: feature:359596-359691:1:exon
so has part: feature:359848-360012:1:exon
so has part: feature:360124-360248:1:exon
so has part: feature:361233-361453:1:exon
so has part: feature:362172-362206:1:exon
so has part: feature:362309-362733:1:exon
so has part: feature:364028-364159:1:exon

XP_032569263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357646-358206:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:358978-359187:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:359303-359363:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:359596-359691:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:359848-360012:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:360124-360248:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:361233-361453:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:362172-362206:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:362309-362733:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:364028-364159:1:exon

LOC116799912
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116799912
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 366618..370513
location: region:366618-370513:1
so has part: feature:366618-370513:1:exon
subclass of: SO_0000010

116799912
type: Gene
SIO_000068: ncbigene

position:366618:1
position: 366618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370513:1
position: 370513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366618-370513:1:exon

LOC116799912
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116799912
product: keratin, type II cytoskeletal cochleal-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 5 bases in 4 codons; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 27% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032713373.1
SIO_010081: LOC116799912
subclass of: SO_0000673
so part of: LOC116799912
location: join(366618..367222,368287..368499,368637..368697,368837..368932,369074..369238,369342..369467,369568..369788,370075..370109,370239..370513)
location: region:366618-370513:1
so has part: feature:366618-367222:1:exon
so has part: feature:368287-368499:1:exon
so has part: feature:368637-368697:1:exon
so has part: feature:368837-368932:1:exon
so has part: feature:369074-369238:1:exon
so has part: feature:369342-369467:1:exon
so has part: feature:369568-369788:1:exon
so has part: feature:370075-370109:1:exon
so has part: feature:370239-370513:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:366618-367222:1:exon

position:367222:1
position: 367222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:368287-368499:1:exon

position:368287:1
position: 368287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368499:1
position: 368499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:368637-368697:1:exon

position:368637:1
position: 368637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368697:1
position: 368697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:368837-368932:1:exon

position:368837:1
position: 368837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368932:1
position: 368932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:369074-369238:1:exon

position:369074:1
position: 369074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369238:1
position: 369238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:369342-369467:1:exon

position:369342:1
position: 369342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369467:1
position: 369467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:369568-369788:1:exon

position:369568:1
position: 369568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369788:1
position: 369788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:370075-370109:1:exon

position:370075:1
position: 370075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370109:1
position: 370109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:370239-370513:1:exon

position:370239:1
position: 370239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116799912
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116799912
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 5 bases in 4 codons; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: keratin, type II cytoskeletal cochleal-like
translation: MPRAGAREDSEHFSLPSAPAQLRRPPRPPRLWLCGALGCPVSPCRSFGMGSRKGFSSCSAVGGGFGSGGRSRISYSSFSTSRGVGGXGRCGGFSSRSLHNLGGSARMSVGGSYGCRIPGFSGGFVGGFGGIAGGVIGGGIGGFVGPVRGGPGFPGGIQPVQVDPTLLRPVHXDIDPQIQQVKCQEKEQIKTLNNQFASFIDKVRFLEQQNKVLSTKWELLQQQGPXGPRKNLDVIFESYIQNLRRQLENLLGQXGQLESELQNMRQYVEEYKCKYEEEINRRTAAENEFVVLKKDVDCAYMTKVELEAKVGALTDEINFLRCIYEEELAQMQTISRDLSVVVSMDNNRHLDLDSIIEEVRRQYEQIAQSSRAEAEAWYQSRYEELQSTAGRHGDNLRNTKIEIQELTRNVQRLRTEIENVKKQNHHLQSAIAEAEERGEMALKDARRKLEELECALSKDKEELARLLKEYQELLNIKIALDVEIAMYRKLLEGEENRLCGDNPSNVNVSVVGRTTVCGGRAGGFGAGNGLAGGGVCVVGGGKRRRGGCGVGGGILSGGFSSGSGRVCSSSAGNFVAGGGSSSVRRCVTTTTVKSSGVKY
SIO_010081: LOC116799912
subclass of: SO_0000673
so part of: LOC116799912
location: join(366618..367222,368287..368499,368637..368697,368837..368932,369074..369238,369342..369467,369568..369788,370075..370109,370239..370513)
location: region:366618-370513:1
so has part: feature:366618-367222:1:exon
so has part: feature:368287-368499:1:exon
so has part: feature:368637-368697:1:exon
so has part: feature:368837-368932:1:exon
so has part: feature:369074-369238:1:exon
so has part: feature:369342-369467:1:exon
so has part: feature:369568-369788:1:exon
so has part: feature:370075-370109:1:exon
so has part: feature:370239-370513:1:exon

XP_032569264.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:366618-367222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:368287-368499:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:368637-368697:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:368837-368932:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:369074-369238:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:369342-369467:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:369568-369788:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:370075-370109:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:370239-370513:1:exon

LOC116799913
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116799913
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 389727..406469
location: region:389727-406469:1
so has part: feature:389727-406469:1:exon
subclass of: SO_0000010

116799913
type: Gene
SIO_000068: ncbigene

position:389727:1
position: 389727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406469:1
position: 406469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389727-406469:1:exon

LOC116799913
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116799913
product: neurofilament medium polypeptide-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 150 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032713374.1
SIO_010081: LOC116799913
subclass of: SO_0000673
so part of: LOC116799913
location: join(389727..390230,392018..392235,394569..394629,395319..395414,398300..398464,398560..398685,400003..400223,402414..402442,404190..404252,404368..404975,405072..405470,405942..406469)
location: region:389727-406469:1
so has part: feature:389727-390230:1:exon
so has part: feature:392018-392235:1:exon
so has part: feature:394569-394629:1:exon
so has part: feature:395319-395414:1:exon
so has part: feature:398300-398464:1:exon
so has part: feature:398560-398685:1:exon
so has part: feature:400003-400223:1:exon
so has part: feature:402414-402442:1:exon
so has part: feature:404190-404252:1:exon
so has part: feature:404368-404975:1:exon
so has part: feature:405072-405470:1:exon
so has part: feature:405942-406469:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:389727-390230:1:exon

position:390230:1
position: 390230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:392018-392235:1:exon

position:392018:1
position: 392018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392235:1
position: 392235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:394569-394629:1:exon

position:394569:1
position: 394569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394629:1
position: 394629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:395319-395414:1:exon

position:395319:1
position: 395319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395414:1
position: 395414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:398300-398464:1:exon

position:398300:1
position: 398300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398464:1
position: 398464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:398560-398685:1:exon

position:398560:1
position: 398560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398685:1
position: 398685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:400003-400223:1:exon

position:400003:1
position: 400003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400223:1
position: 400223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:402414-402442:1:exon

position:402414:1
position: 402414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402442:1
position: 402442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:404190-404252:1:exon

position:404190:1
position: 404190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404252:1
position: 404252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:404368-404975:1:exon

position:404368:1
position: 404368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404975:1
position: 404975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:405072-405470:1:exon

position:405072:1
position: 405072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405470:1
position: 405470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:405942-406469:1:exon

position:405942:1
position: 405942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116799913
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116799913
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurofilament medium polypeptide-like
translation: MRRYFSRYGDGNFSSSSAHCGTLGGGDGRFLGFGPGYGSRSLHNLGGLRNVCAAGGYGGEGAGYGRFGGWRQPERAFYGRGYFTGAFPRGDAGLGSASRASPGREALGAEGPGVGQPGMLRGIEEVHVNPALLRPLELQVDPEFQRVRSDEKEQIKALNNKFASFIDKVQCLERQNQALLAKWQLLQQQSSGPEESRNISSFFQSYISSLQRQLQTLQSQKEQLDPEAYNMLQLVEEYKNRFEDEINNRTSREEEFVELKKELDSAYMGKMELDVRVEILKQELEFLRCLHEAELSQLQTLAGDTDVVLSLAPGRELDLDGIVAEVRQEYEGIARRSSAHVDSVYRGRYQDLQNTWETQREQLRSSHREIQELARHIQRLQPEVEVARKRNSSLQDSIRDAELRGGSAVQEGREQLRELEEALREARQELARLVRDHQELLEAKVALDVEIAVYRALLEEEELRIQEGSPATICVTDHQAGMTGVFGAGPGGMKVMEEEKAQDTEEEEVLEVAPSVEEEVQVVVAPYLGVEKAQDTEEEEAQVAPSVEEEALVEEAPYLGEEKAQDTEEEEALVVDPYLGVEKARDMEEEEALVVPSVEEEVQVEEAPCPRVAAAQEGVDPYLGVVGQVMEEEKALDTEEEEAQVVEAPYLGVEKAQDMEEEEALVDPSVEEEALVEAPYLGVEKARDTEEEEALEVAPYLEEEKAQDTEEEEAQVAPSVEEEVQVVVAPYLGVEKAQDTEEEEAQVAPSVEEEALVVEAPYLGVEKARDMEEEEALVAPSVEEEVLVVEARCPKVAAAQEGVDPYLGVVGQVMEEEKAQDTEEEEAQAVAPYLGVEKAQGMEEEEAQVAPSVEEEALVEAPYLEEEKARDMEEEEALVVAPSVEEEVLVVAPSVEEEVLVVAPYLGVEKAQGMEEEEAQVVVAPYLGVEKAQGMEEEEAQAVEAPCLEVGRALVEDPYLVVVDPCLGVEEVQGMEDREVLVEEGPCLGVGRALAVAGAAPRAVG
SIO_010081: LOC116799913
subclass of: SO_0000673
so part of: LOC116799913
location: join(389727..390230,392018..392235,394569..394629,395319..395414,398300..398464,398560..398685,400003..400223,402414..402442,404190..404252,404368..404975,405072..405470,405942..406469)
location: region:389727-406469:1
so has part: feature:389727-390230:1:exon
so has part: feature:392018-392235:1:exon
so has part: feature:394569-394629:1:exon
so has part: feature:395319-395414:1:exon
so has part: feature:398300-398464:1:exon
so has part: feature:398560-398685:1:exon
so has part: feature:400003-400223:1:exon
so has part: feature:402414-402442:1:exon
so has part: feature:404190-404252:1:exon
so has part: feature:404368-404975:1:exon
so has part: feature:405072-405470:1:exon
so has part: feature:405942-406469:1:exon

XP_032569265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:389727-390230:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:392018-392235:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:394569-394629:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:395319-395414:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:398300-398464:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:398560-398685:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:400003-400223:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:402414-402442:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:404190-404252:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:404368-404975:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:405072-405470:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:405942-406469:1:exon

LOC116800017
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116800017
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 406651..409158
location: region:406651-409158:1
so has part: feature:406651-409158:1:exon
subclass of: SO_0000011

116800017
type: Gene
SIO_000068: ncbigene

position:406651:1
position: 406651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409158:1
position: 409158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406651-409158:1:exon

LOC116800017
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116800017
product: uncharacterized LOC116800017
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004361154.1
SIO_010081: LOC116800017
subclass of: SO_0000673
so part of: LOC116800017
location: join(406651..406862,407301..407483,409071..409158)
location: region:406651-409158:1
so has part: feature:406651-406862:1:exon
so has part: feature:407301-407483:1:exon
so has part: feature:409071-409158:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:406651-406862:1:exon

position:406862:1
position: 406862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:407301-407483:1:exon

position:407301:1
position: 407301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407483:1
position: 407483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:409071-409158:1:exon

position:409071:1
position: 409071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116800015
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116800015
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 423434..434601
location: region:423434-434601:1
so has part: feature:423434-434601:1:exon
subclass of: SO_0000010

116800015
type: Gene
SIO_000068: ncbigene

position:423434:1
position: 423434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434601:1
position: 434601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423434-434601:1:exon

LOC116800015
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116800015
product: keratin, type II cytoskeletal-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 215 Proteins, and 44% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032713530.1
SIO_010081: LOC116800015
subclass of: SO_0000673
so part of: LOC116800015
location: join(423434..423892,426269..426483,430246..430306,430869..430964,431511..431675,431759..431884,432834..433054,433315..433343,434135..434601)
location: region:423434-434601:1
so has part: feature:423434-423892:1:exon
so has part: feature:426269-426483:1:exon
so has part: feature:430246-430306:1:exon
so has part: feature:430869-430964:1:exon
so has part: feature:431511-431675:1:exon
so has part: feature:431759-431884:1:exon
so has part: feature:432834-433054:1:exon
so has part: feature:433315-433343:1:exon
so has part: feature:434135-434601:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:423434-423892:1:exon

position:423892:1
position: 423892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:426269-426483:1:exon

position:426269:1
position: 426269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426483:1
position: 426483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:430246-430306:1:exon

position:430246:1
position: 430246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430306:1
position: 430306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:430869-430964:1:exon

position:430869:1
position: 430869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430964:1
position: 430964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:431511-431675:1:exon

position:431511:1
position: 431511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431675:1
position: 431675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:431759-431884:1:exon

position:431759:1
position: 431759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431884:1
position: 431884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:432834-433054:1:exon

position:432834:1
position: 432834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433054:1
position: 433054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:433315-433343:1:exon

position:433315:1
position: 433315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433343:1
position: 433343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:434135-434601:1:exon

position:434135:1
position: 434135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116800015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116800015
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: keratin, type II cytoskeletal-like
translation: MSRQAPTVRSVLGRRGFSSASEICGRSFAASSCAPARCGAGAYSSRSVCNLGGSRRISYVNGCGTGCFGELAFGAAGYGSAGAGRAGLCGPRGYSLVRGYPERKADGIQGICIDERLLKPLCVGVDPLEHEIRCQEKEQIKSLNTQFACFIDKVRFLEQQNKVLETKWGLLQQYVLPKKGKNLELYFENYICDLRKRLDCLLCEKQKLGSEECATSQLVEEFKCKYEEEINRRTTVENEFVALKKDADCIFLNKEELEVKVDLLRRQLELLKCVFEEERAQVDRQLCDTSVIVKMDNNRDLDMESIIKNVECWYQEIAQKSKEEVDAFYQTRFQELQDKRGKYCDDLQSNKCEISELTRMIQKLQCELESVKKQVSCLQTSICDVEQRGDCALKDAREKHIELQNALQKAKDELACMLRDYQELLNVKLALDIEIATYKTLLEGEESRICVGNPVSVSVVSSSGYPLPDDCGLLAANGACGFGSLGRRSGRHSSPAAGGFSSRSAGIHPKRVLSSVAKPCQVAPEVFCPPGGVGCKAGGFSSRSGGYPARPGLGARVGGVQAGGVVTFGNQGCVIRQLAGPPVVVSGGAEVVGCNPGVVGNFGVVRDPCVVP
SIO_010081: LOC116800015
subclass of: SO_0000673
so part of: LOC116800015
location: join(423434..423892,426269..426483,430246..430306,430869..430964,431511..431675,431759..431884,432834..433054,433315..433343,434135..434601)
location: region:423434-434601:1
so has part: feature:423434-423892:1:exon
so has part: feature:426269-426483:1:exon
so has part: feature:430246-430306:1:exon
so has part: feature:430869-430964:1:exon
so has part: feature:431511-431675:1:exon
so has part: feature:431759-431884:1:exon
so has part: feature:432834-433054:1:exon
so has part: feature:433315-433343:1:exon
so has part: feature:434135-434601:1:exon

XP_032569421.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:423434-423892:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:426269-426483:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:430246-430306:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:430869-430964:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:431511-431675:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:431759-431884:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:432834-433054:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:433315-433343:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:434135-434601:1:exon

LOC116800031
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116800031
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 452675..463751
location: region:452675-463751:1
so has part: feature:452675-463751:1:exon
subclass of: SO_0000010

116800031
type: Gene
SIO_000068: ncbigene

position:452675:1
position: 452675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463751:1
position: 463751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452675-463751:1:exon

LOC116800031
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116800031
product: keratin, type II cytoskeletal 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 266 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032713550.1
SIO_010081: LOC116800031
subclass of: SO_0000673
so part of: LOC116800031
location: join(452675..453238,454935..455149,456211..456271,456562..456657,458915..459079,460027..460152,461090..461310,462426..462454,462598..463751)
location: region:452675-463751:1
so has part: feature:452675-453238:1:exon
so has part: feature:454935-455149:1:exon
so has part: feature:456211-456271:1:exon
so has part: feature:456562-456657:1:exon
so has part: feature:458915-459079:1:exon
so has part: feature:460027-460152:1:exon
so has part: feature:461090-461310:1:exon
so has part: feature:462426-462454:1:exon
so has part: feature:462598-463751:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:452675-453238:1:exon

position:453238:1
position: 453238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:454935-455149:1:exon

position:454935:1
position: 454935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455149:1
position: 455149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:456211-456271:1:exon

position:456211:1
position: 456211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456271:1
position: 456271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:456562-456657:1:exon

position:456562:1
position: 456562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456657:1
position: 456657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:458915-459079:1:exon

position:458915:1
position: 458915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459079:1
position: 459079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:460027-460152:1:exon

position:460027:1
position: 460027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460152:1
position: 460152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:461090-461310:1:exon

position:461090:1
position: 461090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461310:1
position: 461310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:462426-462454:1:exon

position:462426:1
position: 462426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462454:1
position: 462454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:462598-463751:1:exon

position:462598:1
position: 462598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116800031
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116800031
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: keratin, type II cytoskeletal 4-like
translation: MSRQCYTSGSILGRRGFSSASAVCGLGRGSAGSASACQPSARRCGLGGFSSRSVCDLGRGQRISFGGGCRGGVLGGPAVGRCGVAFGPPGRFGVGPVVGFGGCAGGFGGLGGYRGLGDGVAVGGYGGGLGVGLGVGTGRSEGIRGVSIHPELLKPLCVGVDPEECQVRTHEKEQIKNLNNQFACFIDKVRLLEQQNKVLTTKWELLQQYVLPASRRNLEPVFENFICNLRKQLECVMGERERLENEERCLRDLVQEFKCKYEDEINKRTAAENEFVVLKKDVDCLYLTKEELEVRVGLLRQQLEFLKCIYAEERAQLDCQLCDTSVIVQMDNSRDLDMEGIIKSVECCYEEIAQKSKAEVEAFYQTRLEELHSSRGKFCDDLRNNQSEIAELNRMIQKLQCESDNVKKQISALQTAICDAEQRGDCALKDARQKLVDLQTALQQAKDKMACLLRDYQELLNVKLALDIEIATYRTLLEGEESRICTGNPVSVAVVSGGGTVGECRSLSGLAGKCSVKAGGAGAGLGLGLGLGPSFAVGTAGFSARSVDCLPKAGGGFGARSAAGCVGREVMPGVESVQCAPAVGNLGNLGNLGGVVCAGVEQCGPGAVLLPGAGVCGAGSRFGTAVRVVRTTR
SIO_010081: LOC116800031
subclass of: SO_0000673
so part of: LOC116800031
location: join(452675..453238,454935..455149,456211..456271,456562..456657,458915..459079,460027..460152,461090..461310,462426..462454,462598..463022)
location: region:452675-463022:1
so has part: feature:452675-453238:1:exon
so has part: feature:454935-455149:1:exon
so has part: feature:456211-456271:1:exon
so has part: feature:456562-456657:1:exon
so has part: feature:458915-459079:1:exon
so has part: feature:460027-460152:1:exon
so has part: feature:461090-461310:1:exon
so has part: feature:462426-462454:1:exon
so has part: feature:462598-463022:1:exon

XP_032569441.1
type: Protein
SIO_000068: ncbiprotein

position:463022:1
position: 463022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452675-453238:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:454935-455149:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:456211-456271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:456562-456657:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:458915-459079:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:460027-460152:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:461090-461310:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:462426-462454:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:462598-463022:1:exon

LOC116799914
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116799914
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 470957..480494
location: region:470957-480494:1
so has part: feature:470957-480494:1:exon
subclass of: SO_0000010

116799914
type: Gene
SIO_000068: ncbigene

position:470957:1
position: 470957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480494:1
position: 480494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470957-480494:1:exon

LOC116799914
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116799914
product: keratin, type II cytoskeletal 5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 154 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032713375.1
SIO_010081: LOC116799914
subclass of: SO_0000673
so part of: LOC116799914
location: join(470957..471350,471519..471706,473070..473290,475841..475901,476390..476485,476582..476746,478184..478309,478865..479085,479205..479239,479962..480018,480190..480494)
location: region:470957-480494:1
so has part: feature:470957-471350:1:exon
so has part: feature:471519-471706:1:exon
so has part: feature:473070-473290:1:exon
so has part: feature:475841-475901:1:exon
so has part: feature:476390-476485:1:exon
so has part: feature:476582-476746:1:exon
so has part: feature:478184-478309:1:exon
so has part: feature:478865-479085:1:exon
so has part: feature:479205-479239:1:exon
so has part: feature:479962-480018:1:exon
so has part: feature:480190-480494:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:470957-471350:1:exon

position:471350:1
position: 471350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:471519-471706:1:exon

position:471519:1
position: 471519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471706:1
position: 471706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:473070-473290:1:exon

position:473070:1
position: 473070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473290:1
position: 473290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:475841-475901:1:exon

position:475841:1
position: 475841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475901:1
position: 475901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:476390-476485:1:exon

position:476390:1
position: 476390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476485:1
position: 476485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:476582-476746:1:exon

position:476582:1
position: 476582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476746:1
position: 476746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:478184-478309:1:exon

position:478184:1
position: 478184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478309:1
position: 478309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:478865-479085:1:exon

position:478865:1
position: 478865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479085:1
position: 479085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:479205-479239:1:exon

position:479205:1
position: 479205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479239:1
position: 479239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:479962-480018:1:exon

position:479962:1
position: 479962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480018:1
position: 480018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:480190-480494:1:exon

position:480190:1
position: 480190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116799914
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116799914
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: keratin, type II cytoskeletal 5-like
translation: MNRTFSMRAGPGGRSYSAASAIVPSSSRAGFSSVSVARAGGGGGGGGGGGFGRLVGGGGGGGGGGFGSRSLYNLGGSKRISIGVGSSFRAAFGGGAGGGSGLGGGAGGGAGLGLGAGGAGLGLGGGGGGFGGGRGPAGFPGGPPGVGTIQEVTVNQSLLAPLNLEIDPNIGQVRKDEKEQIKSLNNKFASFIDKVRFLEQQNKVLETKWTLLQEQGQKNNSGKSSLDPLFEAYVGNLRRQLGNLLGERGRMDGELRNMQDLVEDFKNKYEEEINRRTAAENEFVVLKKDVDAAYMTKVELEAKVDALSDELNFLRALYEAELAQLSAQVSDTAVILSMDNNRDLDLSSIIAEVKAQYEDIANRSRAEAEAWYQTKFEELQATAGRHGDDLRNTKGEISELNRLIQRIRSEIENTRNQCATIQTAIGDSEERGELALKDAKAKMMDLEDALQKAKADMARQLREYQELMNVKLALDIEIATYRKLLEGEESRLSGEGLNPISYSVISSSSGLAGGAGLGGGFGSGSGFGLGGGGGGGGGGGGGGSYSFGSGGGLGLGGGGGLGGGFGGGHGAGGGSSSLSTSGGNFSSGSAKGTNPGVKIVSKTSSSKKSIKSQSLKNATEPE
SIO_010081: LOC116799914
subclass of: SO_0000673
so part of: LOC116799914
location: join(470957..471350,471519..471706,473070..473290,475841..475901,476390..476485,476582..476746,478184..478309,478865..479085,479205..479239,479962..480018,480190..480494)
location: region:470957-480494:1
so has part: feature:470957-471350:1:exon
so has part: feature:471519-471706:1:exon
so has part: feature:473070-473290:1:exon
so has part: feature:475841-475901:1:exon
so has part: feature:476390-476485:1:exon
so has part: feature:476582-476746:1:exon
so has part: feature:478184-478309:1:exon
so has part: feature:478865-479085:1:exon
so has part: feature:479205-479239:1:exon
so has part: feature:479962-480018:1:exon
so has part: feature:480190-480494:1:exon

XP_032569266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:470957-471350:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:471519-471706:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:473070-473290:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:475841-475901:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:476390-476485:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:476582-476746:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478184-478309:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:478865-479085:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:479205-479239:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:479962-480018:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:480190-480494:1:exon

LOC116800033
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116800033
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 486435..494625
location: region:486435-494625:1
so has part: feature:486435-494625:1:exon
subclass of: SO_0000010

116800033
type: Gene
SIO_000068: ncbigene

position:486435:1
position: 486435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494625:1
position: 494625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486435-494625:1:exon

LOC116800033
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116800033
product: keratin, type II cytoskeletal 6A-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 183 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032713560.1
SIO_010081: LOC116800033
subclass of: SO_0000673
so part of: LOC116800033
location: join(486435..487088,487737..487951,490637..490697,491405..491500,492102..492266,492937..493062,493486..493706,494123..494157,494263..494625)
location: region:486435-494625:1
so has part: feature:486435-487088:1:exon
so has part: feature:487737-487951:1:exon
so has part: feature:490637-490697:1:exon
so has part: feature:491405-491500:1:exon
so has part: feature:492102-492266:1:exon
so has part: feature:492937-493062:1:exon
so has part: feature:493486-493706:1:exon
so has part: feature:494123-494157:1:exon
so has part: feature:494263-494625:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:486435-487088:1:exon

position:487088:1
position: 487088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:487737-487951:1:exon

position:487737:1
position: 487737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487951:1
position: 487951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:490637-490697:1:exon

position:490637:1
position: 490637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490697:1
position: 490697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:491405-491500:1:exon

position:491405:1
position: 491405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491500:1
position: 491500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:492102-492266:1:exon

position:492102:1
position: 492102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492266:1
position: 492266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:492937-493062:1:exon

position:492937:1
position: 492937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493062:1
position: 493062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:493486-493706:1:exon

position:493486:1
position: 493486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493706:1
position: 493706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:494123-494157:1:exon

position:494123:1
position: 494123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494157:1
position: 494157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:494263-494625:1:exon

position:494263:1
position: 494263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116800033
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116800033
product: keratin, type II cytoskeletal 6A-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 104 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032713561.1
SIO_010081: LOC116800033
subclass of: SO_0000673
so part of: LOC116800033
location: join(486435..486783,486826..487088,487737..487951,490637..490697,491405..491500,492102..492266,492937..493062,493486..493706,494123..494157,494263..494625)
location: region:486435-494625:1
so has part: feature:486435-486783:1:exon
so has part: feature:486826-487088:1:exon
so has part: feature:487737-487951:1:exon
so has part: feature:490637-490697:1:exon
so has part: feature:491405-491500:1:exon
so has part: feature:492102-492266:1:exon
so has part: feature:492937-493062:1:exon
so has part: feature:493486-493706:1:exon
so has part: feature:494123-494157:1:exon
so has part: feature:494263-494625:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:486435-486783:1:exon

position:486783:1
position: 486783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:486826-487088:1:exon

position:486826:1
position: 486826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:487737-487951:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:490637-490697:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:491405-491500:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:492102-492266:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:492937-493062:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:493486-493706:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:494123-494157:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:494263-494625:1:exon

LOC116800033
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116800033
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: keratin, type II cytoskeletal 6A-like isoform X1
translation: MSRISFRSSTGGGMRGFSSGSAIVGGGGGGTRSSFSSVSVSRVGGGRAGGGGGFGAGGGFGSRSLYNMGGSKRISIGGLRSGAGGGFGFGGGAGFGLGYGGGGAAFGLGGAGAGGGYGLGSGFGLGGPGFGGRGGPGFPVCPPGGIHEVTVNQSLLAPLKLDIDPEIQKVRTQEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWSLLQEQGHTVTRKSLEPLFEAYIGNLRRQLDSLMGERGRLDSELRNMQDMVEDFKNKYEDEINRRTGAENEFVVLKKDVDGAYMNKVELQGKADSLAEEINFLRALYEAELSQMQQQVSDTSVVLSMDNNRSLDLNSIIAEVKAQYEDIANRSRAEAEAWYQNKYEELQVSAGRHGDDLRNTKIEISEINRMVQRLRNEIDSVKKQCANLQAAIAEAEERGELALKDAKAKLSELEDALQKAKQDLARQLREYQELMNVKLALDIEIATYRKLLEGEESRLAGEGVGAVSVSVVSSSSGMGYGGGSCLGMGGGLGMGGGGGGGFSVSGGGFGGGSGGGFGGLSYGGGSTFSSGSSRGVSSSTGGSVRIVSKTTTSKKTIR
SIO_010081: LOC116800033
subclass of: SO_0000673
so part of: LOC116800033
location: join(486516..487088,487737..487951,490637..490697,491405..491500,492102..492266,492937..493062,493486..493706,494123..494157,494263..494531)
location: region:486516-494531:1
so has part: feature:486516-487088:1:exon
so has part: feature:487737-487951:1:exon
so has part: feature:490637-490697:1:exon
so has part: feature:491405-491500:1:exon
so has part: feature:492102-492266:1:exon
so has part: feature:492937-493062:1:exon
so has part: feature:493486-493706:1:exon
so has part: feature:494123-494157:1:exon
so has part: feature:494263-494531:1:exon

XP_032569451.1
type: Protein
SIO_000068: ncbiprotein

position:486516:1
position: 486516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494531:1
position: 494531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486516-487088:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:487737-487951:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:490637-490697:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:491405-491500:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:492102-492266:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:492937-493062:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:493486-493706:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:494123-494157:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:494263-494531:1:exon

LOC116800033
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116800033
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: keratin, type II cytoskeletal 5-like isoform X2
translation: MSRISFRSSTGGGMRGFSSGSAIVGGGGGGTRSSFSSVSVSRVGGGRAGGGGGFGAGGGFGSRSLYNMGGSKRISIGGLRSGAGGGFGFAAFGLGGAGAGGGYGLGSGFGLGGPGFGGRGGPGFPVCPPGGIHEVTVNQSLLAPLKLDIDPEIQKVRTQEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWSLLQEQGHTVTRKSLEPLFEAYIGNLRRQLDSLMGERGRLDSELRNMQDMVEDFKNKYEDEINRRTGAENEFVVLKKDVDGAYMNKVELQGKADSLAEEINFLRALYEAELSQMQQQVSDTSVVLSMDNNRSLDLNSIIAEVKAQYEDIANRSRAEAEAWYQNKYEELQVSAGRHGDDLRNTKIEISEINRMVQRLRNEIDSVKKQCANLQAAIAEAEERGELALKDAKAKLSELEDALQKAKQDLARQLREYQELMNVKLALDIEIATYRKLLEGEESRLAGEGVGAVSVSVVSSSSGMGYGGGSCLGMGGGLGMGGGGGGGFSVSGGGFGGGSGGGFGGLSYGGGSTFSSGSSRGVSSSTGGSVRIVSKTTTSKKTIR
SIO_010081: LOC116800033
subclass of: SO_0000673
so part of: LOC116800033
location: join(486516..486783,486826..487088,487737..487951,490637..490697,491405..491500,492102..492266,492937..493062,493486..493706,494123..494157,494263..494531)
location: region:486516-494531:1
so has part: feature:486516-486783:1:exon
so has part: feature:486826-487088:1:exon
so has part: feature:487737-487951:1:exon
so has part: feature:490637-490697:1:exon
so has part: feature:491405-491500:1:exon
so has part: feature:492102-492266:1:exon
so has part: feature:492937-493062:1:exon
so has part: feature:493486-493706:1:exon
so has part: feature:494123-494157:1:exon
so has part: feature:494263-494531:1:exon

XP_032569452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:486516-486783:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:486826-487088:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:487737-487951:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:490637-490697:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:491405-491500:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:492102-492266:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:492937-493062:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:493486-493706:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:494123-494157:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:494263-494531:1:exon

LOC116800034
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116800034
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 505313..511400
location: region:505313-511400:1
so has part: feature:505313-511400:1:exon
subclass of: SO_0000010

116800034
type: Gene
SIO_000068: ncbigene

position:505313:1
position: 505313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511400:1
position: 511400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505313-511400:1:exon

LOC116800034
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116800034
product: keratin, type II cytoskeletal 6A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 232 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032713562.1
SIO_010081: LOC116800034
subclass of: SO_0000673
so part of: LOC116800034
location: join(505313..505768,506983..507197,507730..507790,507991..508086,508301..508465,509718..509843,510573..510793,511068..511099,511207..511400)
location: region:505313-511400:1
so has part: feature:505313-505768:1:exon
so has part: feature:506983-507197:1:exon
so has part: feature:507730-507790:1:exon
so has part: feature:507991-508086:1:exon
so has part: feature:508301-508465:1:exon
so has part: feature:509718-509843:1:exon
so has part: feature:510573-510793:1:exon
so has part: feature:511068-511099:1:exon
so has part: feature:511207-511400:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:505313-505768:1:exon

position:505768:1
position: 505768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:506983-507197:1:exon

position:506983:1
position: 506983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507197:1
position: 507197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:507730-507790:1:exon

position:507730:1
position: 507730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507790:1
position: 507790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:507991-508086:1:exon

position:507991:1
position: 507991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508086:1
position: 508086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:508301-508465:1:exon

position:508301:1
position: 508301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508465:1
position: 508465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:509718-509843:1:exon

position:509718:1
position: 509718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509843:1
position: 509843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:510573-510793:1:exon

position:510573:1
position: 510573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510793:1
position: 510793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:511068-511099:1:exon

position:511068:1
position: 511068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511099:1
position: 511099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:511207-511400:1:exon

position:511207:1
position: 511207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116800034
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116800034
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: keratin, type II cytoskeletal 6A-like
translation: MSRQSTVRIQRGRSGFSAASAAVPGTCRTSFSSCSVTRLGGCGAGSGFARVGGGFGSKSLYNVGGCKKISVAGRGGSFYGAGSAYGGGFGLPANLGYGYPGFPAGGIHEVSVNQSLLKPLNLEIDPNIQRIRKEEKEQIKTLNNKFASFIDKVRFLEQQNKVLETKWSLLQEQGMKTVRNNLEPLFETYINNLRVQLNSLLSDKGRLEGELLNTQYLVEDFKKKYEDEINRRTIAENEFVTLKKDVDGSYMNKVELQAKADALTEEINFLRTLYEAELSQMQTQISDTSVVLTMDNNRNLDLDSIISEVKAQYEDIANRSRAEAESWYQTKYEELQATAGRHGDDLRNTKQEISELNRHVQRLRSEIDSVKKQCANLKAAIADAEERGELTLKDAKAKLSELEDALQQAKADLARQLREYQELMNVKLALDIEIATYRKLLEGEECRLAGDGVPVNISVTRTTVGSGYGAGSNLSVAGGMCGLGSGFGCAPGPGGSSALGAGSSSSVKFVSTSSTRRSYRS
SIO_010081: LOC116800034
subclass of: SO_0000673
so part of: LOC116800034
location: join(505313..505768,506983..507197,507730..507790,507991..508086,508301..508465,509718..509843,510573..510793,511068..511099,511207..511400)
location: region:505313-511400:1
so has part: feature:505313-505768:1:exon
so has part: feature:506983-507197:1:exon
so has part: feature:507730-507790:1:exon
so has part: feature:507991-508086:1:exon
so has part: feature:508301-508465:1:exon
so has part: feature:509718-509843:1:exon
so has part: feature:510573-510793:1:exon
so has part: feature:511068-511099:1:exon
so has part: feature:511207-511400:1:exon

XP_032569453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:505313-505768:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:506983-507197:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:507730-507790:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:507991-508086:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:508301-508465:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:509718-509843:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:510573-510793:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:511068-511099:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:511207-511400:1:exon

LOC116800035
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116800035
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(517560..536459)
location: region:517560-536459:-1
so has part: feature:517560-536459:-1:exon
subclass of: SO_0000010

116800035
type: Gene
SIO_000068: ncbigene

position:517560:-1
position: 517560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536459:-1
position: 536459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517560-536459:-1:exon

LOC116800035
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116800035
product: keratin, type II cytoskeletal cochleal-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 4 long SRA reads, 111 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032713563.1
SIO_010081: LOC116800035
subclass of: SO_0000673
so part of: LOC116800035
location: complement(join(517560..518653,519926..519960,521313..521533,524382..524507,525395..525559,527202..527297,529222..529282,533171..533379,535912..536459))
location: region:517560-536459:-1
so has part: feature:535912-536459:-1:exon
so has part: feature:533171-533379:-1:exon
so has part: feature:529222-529282:-1:exon
so has part: feature:527202-527297:-1:exon
so has part: feature:525395-525559:-1:exon
so has part: feature:524382-524507:-1:exon
so has part: feature:521313-521533:-1:exon
so has part: feature:519926-519960:-1:exon
so has part: feature:517560-518653:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:535912-536459:-1:exon

position:535912:-1
position: 535912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:533171-533379:-1:exon

position:533171:-1
position: 533171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533379:-1
position: 533379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:529222-529282:-1:exon

position:529222:-1
position: 529222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529282:-1
position: 529282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:527202-527297:-1:exon

position:527202:-1
position: 527202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527297:-1
position: 527297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:525395-525559:-1:exon

position:525395:-1
position: 525395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525559:-1
position: 525559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:524382-524507:-1:exon

position:524382:-1
position: 524382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524507:-1
position: 524507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:521313-521533:-1:exon

position:521313:-1
position: 521313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521533:-1
position: 521533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:519926-519960:-1:exon

position:519926:-1
position: 519926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519960:-1
position: 519960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:517560-518653:-1:exon

position:518653:-1
position: 518653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116800035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116800035
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: keratin, type II cytoskeletal cochleal-like
translation: MSRSVSFSSRSAAGPAVTQVRVSSVSSTRGLGGSGLGRAGGFGSSSLYSLGSARRVSTGGSGSYSVRSGFGFGSAGLGALSPGGIQEVTVNQSLLTPLNLEIDPNIQRVRKEEKEQIKTLNNKFASFIDKVRFLEQQNKMLETKWSLLQDQKTTRSNIGPMFETYISNLRRQLDGLLGDKGRLEGELKNMQDLVEDFKNKYEDEINKRAAAENEFVVLKKDVDAAYMNKVELEAKVDALTDEINFLRAFQEAEINELQAQISDTSVVLSMDNSRNLDLDSIIAEVKAQYEDIANRSRAEAEAWYQTKYEQLQVTAGKHGDDLRNTKNEITEINRVIQRLQGEIESAKAQRAKLEAAVAEAEERGELALKDARAKLAELEDALQKAKADMARQLREYQELMNVKLALDIEIATYRKLLEGEESRLAGDGVGNVNISVVSSSGGGGGFSSSGGFLGGALGAGMGSGALGFSSGGATKSYSITTTSSTRRSVRK
SIO_010081: LOC116800035
subclass of: SO_0000673
so part of: LOC116800035
location: complement(join(518481..518653,519926..519960,521313..521533,524382..524507,525395..525559,527202..527297,529222..529282,533171..533379,535912..536301))
location: region:518481-536301:-1
so has part: feature:535912-536301:-1:exon
so has part: feature:533171-533379:-1:exon
so has part: feature:529222-529282:-1:exon
so has part: feature:527202-527297:-1:exon
so has part: feature:525395-525559:-1:exon
so has part: feature:524382-524507:-1:exon
so has part: feature:521313-521533:-1:exon
so has part: feature:519926-519960:-1:exon
so has part: feature:518481-518653:-1:exon

XP_032569454.1
type: Protein
SIO_000068: ncbiprotein

position:518481:-1
position: 518481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536301:-1
position: 536301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:535912-536301:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:533171-533379:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:529222-529282:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:527202-527297:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:525395-525559:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:524382-524507:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:521313-521533:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:519926-519960:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:518481-518653:-1:exon

LOC116800032
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116800032
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 557456..578451
location: region:557456-578451:1
so has part: feature:557456-578451:1:exon
subclass of: SO_0000010

116800032
type: Gene
SIO_000068: ncbigene

position:557456:1
position: 557456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578451:1
position: 578451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557456-578451:1:exon

LOC116800032
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116800032
product: keratin, type II cytoskeletal 80-like, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032713558.1
SIO_010081: LOC116800032
subclass of: SO_0000673
so part of: LOC116800032
location: join(557456..558873,565376..565590,568861..568921,570694..570789,572429..572593,573871..573996,575393..575613,576783..576838,576919..578451)
location: region:557456-578451:1
so has part: feature:557456-558873:1:exon
so has part: feature:565376-565590:1:exon
so has part: feature:568861-568921:1:exon
so has part: feature:570694-570789:1:exon
so has part: feature:572429-572593:1:exon
so has part: feature:573871-573996:1:exon
so has part: feature:575393-575613:1:exon
so has part: feature:576783-576838:1:exon
so has part: feature:576919-578451:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:557456-558873:1:exon

position:558873:1
position: 558873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:565376-565590:1:exon

position:565376:1
position: 565376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565590:1
position: 565590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:568861-568921:1:exon

position:568861:1
position: 568861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:568921:1
position: 568921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:570694-570789:1:exon

position:570694:1
position: 570694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570789:1
position: 570789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:572429-572593:1:exon

position:572429:1
position: 572429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:572593:1
position: 572593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:573871-573996:1:exon

position:573871:1
position: 573871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573996:1
position: 573996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:575393-575613:1:exon

position:575393:1
position: 575393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575613:1
position: 575613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:576783-576838:1:exon

position:576783:1
position: 576783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576838:1
position: 576838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:576919-578451:1:exon

position:576919:1
position: 576919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116800032
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116800032
product: keratin, type II cytoskeletal 80-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032713551.1
SIO_010081: LOC116800032
subclass of: SO_0000673
so part of: LOC116800032
location: join(557456..557935,557999..558202,558243..558873,565376..565590,568861..568921,570694..570789,572429..572593,573871..573996,575393..575613,576783..576838,576919..578451)
location: region:557456-578451:1
so has part: feature:557456-557935:1:exon
so has part: feature:557999-558202:1:exon
so has part: feature:558243-558873:1:exon
so has part: feature:565376-565590:1:exon
so has part: feature:568861-568921:1:exon
so has part: feature:570694-570789:1:exon
so has part: feature:572429-572593:1:exon
so has part: feature:573871-573996:1:exon
so has part: feature:575393-575613:1:exon
so has part: feature:576783-576838:1:exon
so has part: feature:576919-578451:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:557456-557935:1:exon

position:557935:1
position: 557935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:557999-558202:1:exon

position:557999:1
position: 557999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558202:1
position: 558202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:558243-558873:1:exon

position:558243:1
position: 558243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:565376-565590:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:568861-568921:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:570694-570789:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:572429-572593:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:573871-573996:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:575393-575613:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:576783-576838:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:576919-578451:1:exon

LOC116800032
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116800032
product: keratin, type II cytoskeletal 80-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032713554.1
SIO_010081: LOC116800032
subclass of: SO_0000673
so part of: LOC116800032
location: join(557456..557909,557994..558202,558243..558873,565376..565590,568861..568921,570694..570789,572429..572593,573871..573996,575393..575613,576783..576838,576919..578451)
location: region:557456-578451:1
so has part: feature:557456-557909:1:exon
so has part: feature:557994-558202:1:exon
so has part: feature:558243-558873:1:exon
so has part: feature:565376-565590:1:exon
so has part: feature:568861-568921:1:exon
so has part: feature:570694-570789:1:exon
so has part: feature:572429-572593:1:exon
so has part: feature:573871-573996:1:exon
so has part: feature:575393-575613:1:exon
so has part: feature:576783-576838:1:exon
so has part: feature:576919-578451:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:557456-557909:1:exon

position:557909:1
position: 557909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:557994-558202:1:exon

position:557994:1
position: 557994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:558243-558873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:565376-565590:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:568861-568921:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:570694-570789:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:572429-572593:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:573871-573996:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:575393-575613:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:576783-576838:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:576919-578451:1:exon

LOC116800032
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116800032
product: keratin, type II cytoskeletal 80-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032713555.1
SIO_010081: LOC116800032
subclass of: SO_0000673
so part of: LOC116800032
location: join(557456..557825,557931..558202,558243..558873,565376..565590,568861..568921,570694..570789,572429..572593,573871..573996,575393..575613,576783..576838,576919..578451)
location: region:557456-578451:1
so has part: feature:557456-557825:1:exon
so has part: feature:557931-558202:1:exon
so has part: feature:558243-558873:1:exon
so has part: feature:565376-565590:1:exon
so has part: feature:568861-568921:1:exon
so has part: feature:570694-570789:1:exon
so has part: feature:572429-572593:1:exon
so has part: feature:573871-573996:1:exon
so has part: feature:575393-575613:1:exon
so has part: feature:576783-576838:1:exon
so has part: feature:576919-578451:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:557456-557825:1:exon

position:557825:1
position: 557825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:557931-558202:1:exon

position:557931:1
position: 557931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:558243-558873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:565376-565590:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:568861-568921:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:570694-570789:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:572429-572593:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:573871-573996:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:575393-575613:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:576783-576838:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:576919-578451:1:exon

LOC116800032
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116800032
product: keratin, type II cytoskeletal 80-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032713556.1
SIO_010081: LOC116800032
subclass of: SO_0000673
so part of: LOC116800032
location: join(557456..557783,557931..558202,558243..558873,565376..565590,568861..568921,570694..570789,572429..572593,573871..573996,575393..575613,576783..576838,576919..578451)
location: region:557456-578451:1
so has part: feature:557456-557783:1:exon
so has part: feature:557931-558202:1:exon
so has part: feature:558243-558873:1:exon
so has part: feature:565376-565590:1:exon
so has part: feature:568861-568921:1:exon
so has part: feature:570694-570789:1:exon
so has part: feature:572429-572593:1:exon
so has part: feature:573871-573996:1:exon
so has part: feature:575393-575613:1:exon
so has part: feature:576783-576838:1:exon
so has part: feature:576919-578451:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:557456-557783:1:exon

position:557783:1
position: 557783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:557931-558202:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:558243-558873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:565376-565590:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:568861-568921:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:570694-570789:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:572429-572593:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:573871-573996:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:575393-575613:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:576783-576838:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:576919-578451:1:exon

LOC116800032
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116800032
product: keratin, type II cytoskeletal 80-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032713557.1
SIO_010081: LOC116800032
subclass of: SO_0000673
so part of: LOC116800032
location: join(557456..557746,557999..558202,558243..558873,565376..565590,568861..568921,570694..570789,572429..572593,573871..573996,575393..575613,576783..576838,576919..578451)
location: region:557456-578451:1
so has part: feature:557456-557746:1:exon
so has part: feature:557999-558202:1:exon
so has part: feature:558243-558873:1:exon
so has part: feature:565376-565590:1:exon
so has part: feature:568861-568921:1:exon
so has part: feature:570694-570789:1:exon
so has part: feature:572429-572593:1:exon
so has part: feature:573871-573996:1:exon
so has part: feature:575393-575613:1:exon
so has part: feature:576783-576838:1:exon
so has part: feature:576919-578451:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:557456-557746:1:exon

position:557746:1
position: 557746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:557999-558202:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:558243-558873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:565376-565590:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:568861-568921:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:570694-570789:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:572429-572593:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:573871-573996:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:575393-575613:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:576783-576838:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:576919-578451:1:exon

LOC116800032
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116800032
product: keratin, type II cytoskeletal 80-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032713552.1
SIO_010081: LOC116800032
subclass of: SO_0000673
so part of: LOC116800032
location: join(557456..557704,557831..558202,558243..558873,565376..565590,568861..568921,570694..570789,572429..572593,573871..573996,575393..575613,576783..576838,576919..578451)
location: region:557456-578451:1
so has part: feature:557456-557704:1:exon
so has part: feature:557831-558202:1:exon
so has part: feature:558243-558873:1:exon
so has part: feature:565376-565590:1:exon
so has part: feature:568861-568921:1:exon
so has part: feature:570694-570789:1:exon
so has part: feature:572429-572593:1:exon
so has part: feature:573871-573996:1:exon
so has part: feature:575393-575613:1:exon
so has part: feature:576783-576838:1:exon
so has part: feature:576919-578451:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:557456-557704:1:exon

position:557704:1
position: 557704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:557831-558202:1:exon

position:557831:1
position: 557831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:558243-558873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:565376-565590:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:568861-568921:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:570694-570789:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:572429-572593:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:573871-573996:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:575393-575613:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:576783-576838:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:576919-578451:1:exon

LOC116800032
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116800032
product: keratin, type II cytoskeletal 80-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032713553.1
SIO_010081: LOC116800032
subclass of: SO_0000673
so part of: LOC116800032
location: join(557690..557725,557831..558202,558243..558873,565376..565590,568861..568921,570694..570789,572429..572593,573871..573996,575393..575613,576783..576838,576919..578451)
location: region:557690-578451:1
so has part: feature:557690-557725:1:exon
so has part: feature:557831-558202:1:exon
so has part: feature:558243-558873:1:exon
so has part: feature:565376-565590:1:exon
so has part: feature:568861-568921:1:exon
so has part: feature:570694-570789:1:exon
so has part: feature:572429-572593:1:exon
so has part: feature:573871-573996:1:exon
so has part: feature:575393-575613:1:exon
so has part: feature:576783-576838:1:exon
so has part: feature:576919-578451:1:exon

position:557690:1
position: 557690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557690-557725:1:exon

position:557725:1
position: 557725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:557831-558202:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:558243-558873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:565376-565590:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:568861-568921:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:570694-570789:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:572429-572593:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:573871-573996:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:575393-575613:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:576783-576838:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:576919-578451:1:exon

LOC116800032
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116800032
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: keratin, type II cytoskeletal 80-like isoform X1
translation: MLGLVSEKDTGTGEGPGIGTGGRRDWRRTRDWNERTGDWRRTRDWNRRTKGLEKDPGLEQEDTETRKGRARKGAGAAGASAFQGSCRGKEGRAGEGAGAHPGSRRCPRVTSAGPPCPAQGTSRRWNSLPARLSSHPPLRHSLPSQIHPSLGLFSPFFPPVRPVPSRPRAGAASRLMTNPSSAFAGGSLSSARGMSRARAAGPDEAATPEGPPRTPLGTAGPLRAPPAPSLAVDPELQELRRQEKDEIKALNNQFVTLIEKVQDLEQQNKVLTTRWNFLKEQDNSQSDADVRAIYEQFMGRMSQERKALSLEQENLERELEKVLGTMDAFRSKYEDEIRLCSGMEFTFMELKKDLDVSTLHRTELEVKLKGLQELMELKKSIYEQELQELLSELQDISVVLGIDPSCRVDLSRIVEDVRAQYESLARHSWHEAEALSRRKLSEGHSQAGTFGGHLLESRREIAELNIRIQKLRSGIVSQRSQCLFLEEHIREAGEQGEAALRDAKAKLVGLEEALQRNKERVAQLVKEHQELMNIKLALDVEILTYRKLMEGEESSLEQPIPAVISAVRSRPRPLSASARCHSRLFAGAGQGIPGSSPNGGGTKTLRGAQ
SIO_010081: LOC116800032
subclass of: SO_0000673
so part of: LOC116800032
location: join(558054..558202,558243..558873,565376..565590,568861..568921,570694..570789,572429..572593,573871..573996,575393..575613,576783..576838,576919..577028)
location: region:558054-577028:1
so has part: feature:558054-558202:1:exon
so has part: feature:558243-558873:1:exon
so has part: feature:565376-565590:1:exon
so has part: feature:568861-568921:1:exon
so has part: feature:570694-570789:1:exon
so has part: feature:572429-572593:1:exon
so has part: feature:573871-573996:1:exon
so has part: feature:575393-575613:1:exon
so has part: feature:576783-576838:1:exon
so has part: feature:576919-577028:1:exon

XP_032569442.1
type: Protein
SIO_000068: ncbiprotein

position:558054:1
position: 558054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577028:1
position: 577028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558054-558202:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:558243-558873:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:565376-565590:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:568861-568921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:570694-570789:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:572429-572593:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:573871-573996:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:575393-575613:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:576783-576838:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:576919-577028:1:exon

LOC116800032
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116800032
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: keratin, type II cytoskeletal 80-like isoform X1
translation: MLGLVSEKDTGTGEGPGIGTGGRRDWRRTRDWNERTGDWRRTRDWNRRTKGLEKDPGLEQEDTETRKGRARKGAGAAGASAFQGSCRGKEGRAGEGAGAHPGSRRCPRVTSAGPPCPAQGTSRRWNSLPARLSSHPPLRHSLPSQIHPSLGLFSPFFPPVRPVPSRPRAGAASRLMTNPSSAFAGGSLSSARGMSRARAAGPDEAATPEGPPRTPLGTAGPLRAPPAPSLAVDPELQELRRQEKDEIKALNNQFVTLIEKVQDLEQQNKVLTTRWNFLKEQDNSQSDADVRAIYEQFMGRMSQERKALSLEQENLERELEKVLGTMDAFRSKYEDEIRLCSGMEFTFMELKKDLDVSTLHRTELEVKLKGLQELMELKKSIYEQELQELLSELQDISVVLGIDPSCRVDLSRIVEDVRAQYESLARHSWHEAEALSRRKLSEGHSQAGTFGGHLLESRREIAELNIRIQKLRSGIVSQRSQCLFLEEHIREAGEQGEAALRDAKAKLVGLEEALQRNKERVAQLVKEHQELMNIKLALDVEILTYRKLMEGEESSLEQPIPAVISAVRSRPRPLSASARCHSRLFAGAGQGIPGSSPNGGGTKTLRGAQ
SIO_010081: LOC116800032
subclass of: SO_0000673
so part of: LOC116800032
location: join(558054..558202,558243..558873,565376..565590,568861..568921,570694..570789,572429..572593,573871..573996,575393..575613,576783..576838,576919..577028)
location: region:558054-577028:1
so has part: feature:558054-558202:1:exon
so has part: feature:558243-558873:1:exon
so has part: feature:565376-565590:1:exon
so has part: feature:568861-568921:1:exon
so has part: feature:570694-570789:1:exon
so has part: feature:572429-572593:1:exon
so has part: feature:573871-573996:1:exon
so has part: feature:575393-575613:1:exon
so has part: feature:576783-576838:1:exon
so has part: feature:576919-577028:1:exon

XP_032569443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:558054-558202:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:558243-558873:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:565376-565590:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:568861-568921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:570694-570789:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:572429-572593:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:573871-573996:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:575393-575613:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:576783-576838:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:576919-577028:1:exon

LOC116800032
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116800032
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: keratin, type II cytoskeletal 80-like isoform X1
translation: MLGLVSEKDTGTGEGPGIGTGGRRDWRRTRDWNERTGDWRRTRDWNRRTKGLEKDPGLEQEDTETRKGRARKGAGAAGASAFQGSCRGKEGRAGEGAGAHPGSRRCPRVTSAGPPCPAQGTSRRWNSLPARLSSHPPLRHSLPSQIHPSLGLFSPFFPPVRPVPSRPRAGAASRLMTNPSSAFAGGSLSSARGMSRARAAGPDEAATPEGPPRTPLGTAGPLRAPPAPSLAVDPELQELRRQEKDEIKALNNQFVTLIEKVQDLEQQNKVLTTRWNFLKEQDNSQSDADVRAIYEQFMGRMSQERKALSLEQENLERELEKVLGTMDAFRSKYEDEIRLCSGMEFTFMELKKDLDVSTLHRTELEVKLKGLQELMELKKSIYEQELQELLSELQDISVVLGIDPSCRVDLSRIVEDVRAQYESLARHSWHEAEALSRRKLSEGHSQAGTFGGHLLESRREIAELNIRIQKLRSGIVSQRSQCLFLEEHIREAGEQGEAALRDAKAKLVGLEEALQRNKERVAQLVKEHQELMNIKLALDVEILTYRKLMEGEESSLEQPIPAVISAVRSRPRPLSASARCHSRLFAGAGQGIPGSSPNGGGTKTLRGAQ
SIO_010081: LOC116800032
subclass of: SO_0000673
so part of: LOC116800032
location: join(558054..558202,558243..558873,565376..565590,568861..568921,570694..570789,572429..572593,573871..573996,575393..575613,576783..576838,576919..577028)
location: region:558054-577028:1
so has part: feature:558054-558202:1:exon
so has part: feature:558243-558873:1:exon
so has part: feature:565376-565590:1:exon
so has part: feature:568861-568921:1:exon
so has part: feature:570694-570789:1:exon
so has part: feature:572429-572593:1:exon
so has part: feature:573871-573996:1:exon
so has part: feature:575393-575613:1:exon
so has part: feature:576783-576838:1:exon
so has part: feature:576919-577028:1:exon

XP_032569444.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:558054-558202:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:558243-558873:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:565376-565590:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:568861-568921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:570694-570789:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:572429-572593:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:573871-573996:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:575393-575613:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:576783-576838:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:576919-577028:1:exon

LOC116800032
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116800032
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: keratin, type II cytoskeletal 80-like isoform X1
translation: MLGLVSEKDTGTGEGPGIGTGGRRDWRRTRDWNERTGDWRRTRDWNRRTKGLEKDPGLEQEDTETRKGRARKGAGAAGASAFQGSCRGKEGRAGEGAGAHPGSRRCPRVTSAGPPCPAQGTSRRWNSLPARLSSHPPLRHSLPSQIHPSLGLFSPFFPPVRPVPSRPRAGAASRLMTNPSSAFAGGSLSSARGMSRARAAGPDEAATPEGPPRTPLGTAGPLRAPPAPSLAVDPELQELRRQEKDEIKALNNQFVTLIEKVQDLEQQNKVLTTRWNFLKEQDNSQSDADVRAIYEQFMGRMSQERKALSLEQENLERELEKVLGTMDAFRSKYEDEIRLCSGMEFTFMELKKDLDVSTLHRTELEVKLKGLQELMELKKSIYEQELQELLSELQDISVVLGIDPSCRVDLSRIVEDVRAQYESLARHSWHEAEALSRRKLSEGHSQAGTFGGHLLESRREIAELNIRIQKLRSGIVSQRSQCLFLEEHIREAGEQGEAALRDAKAKLVGLEEALQRNKERVAQLVKEHQELMNIKLALDVEILTYRKLMEGEESSLEQPIPAVISAVRSRPRPLSASARCHSRLFAGAGQGIPGSSPNGGGTKTLRGAQ
SIO_010081: LOC116800032
subclass of: SO_0000673
so part of: LOC116800032
location: join(558054..558202,558243..558873,565376..565590,568861..568921,570694..570789,572429..572593,573871..573996,575393..575613,576783..576838,576919..577028)
location: region:558054-577028:1
so has part: feature:558054-558202:1:exon
so has part: feature:558243-558873:1:exon
so has part: feature:565376-565590:1:exon
so has part: feature:568861-568921:1:exon
so has part: feature:570694-570789:1:exon
so has part: feature:572429-572593:1:exon
so has part: feature:573871-573996:1:exon
so has part: feature:575393-575613:1:exon
so has part: feature:576783-576838:1:exon
so has part: feature:576919-577028:1:exon

XP_032569445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:558054-558202:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:558243-558873:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:565376-565590:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:568861-568921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:570694-570789:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:572429-572593:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:573871-573996:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:575393-575613:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:576783-576838:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:576919-577028:1:exon

LOC116800032
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116800032
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: keratin, type II cytoskeletal 80-like isoform X1
translation: MLGLVSEKDTGTGEGPGIGTGGRRDWRRTRDWNERTGDWRRTRDWNRRTKGLEKDPGLEQEDTETRKGRARKGAGAAGASAFQGSCRGKEGRAGEGAGAHPGSRRCPRVTSAGPPCPAQGTSRRWNSLPARLSSHPPLRHSLPSQIHPSLGLFSPFFPPVRPVPSRPRAGAASRLMTNPSSAFAGGSLSSARGMSRARAAGPDEAATPEGPPRTPLGTAGPLRAPPAPSLAVDPELQELRRQEKDEIKALNNQFVTLIEKVQDLEQQNKVLTTRWNFLKEQDNSQSDADVRAIYEQFMGRMSQERKALSLEQENLERELEKVLGTMDAFRSKYEDEIRLCSGMEFTFMELKKDLDVSTLHRTELEVKLKGLQELMELKKSIYEQELQELLSELQDISVVLGIDPSCRVDLSRIVEDVRAQYESLARHSWHEAEALSRRKLSEGHSQAGTFGGHLLESRREIAELNIRIQKLRSGIVSQRSQCLFLEEHIREAGEQGEAALRDAKAKLVGLEEALQRNKERVAQLVKEHQELMNIKLALDVEILTYRKLMEGEESSLEQPIPAVISAVRSRPRPLSASARCHSRLFAGAGQGIPGSSPNGGGTKTLRGAQ
SIO_010081: LOC116800032
subclass of: SO_0000673
so part of: LOC116800032
location: join(558054..558202,558243..558873,565376..565590,568861..568921,570694..570789,572429..572593,573871..573996,575393..575613,576783..576838,576919..577028)
location: region:558054-577028:1
so has part: feature:558054-558202:1:exon
so has part: feature:558243-558873:1:exon
so has part: feature:565376-565590:1:exon
so has part: feature:568861-568921:1:exon
so has part: feature:570694-570789:1:exon
so has part: feature:572429-572593:1:exon
so has part: feature:573871-573996:1:exon
so has part: feature:575393-575613:1:exon
so has part: feature:576783-576838:1:exon
so has part: feature:576919-577028:1:exon

XP_032569446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:558054-558202:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:558243-558873:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:565376-565590:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:568861-568921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:570694-570789:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:572429-572593:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:573871-573996:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:575393-575613:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:576783-576838:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:576919-577028:1:exon

LOC116800032
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116800032
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: keratin, type II cytoskeletal 80-like isoform X1
translation: MLGLVSEKDTGTGEGPGIGTGGRRDWRRTRDWNERTGDWRRTRDWNRRTKGLEKDPGLEQEDTETRKGRARKGAGAAGASAFQGSCRGKEGRAGEGAGAHPGSRRCPRVTSAGPPCPAQGTSRRWNSLPARLSSHPPLRHSLPSQIHPSLGLFSPFFPPVRPVPSRPRAGAASRLMTNPSSAFAGGSLSSARGMSRARAAGPDEAATPEGPPRTPLGTAGPLRAPPAPSLAVDPELQELRRQEKDEIKALNNQFVTLIEKVQDLEQQNKVLTTRWNFLKEQDNSQSDADVRAIYEQFMGRMSQERKALSLEQENLERELEKVLGTMDAFRSKYEDEIRLCSGMEFTFMELKKDLDVSTLHRTELEVKLKGLQELMELKKSIYEQELQELLSELQDISVVLGIDPSCRVDLSRIVEDVRAQYESLARHSWHEAEALSRRKLSEGHSQAGTFGGHLLESRREIAELNIRIQKLRSGIVSQRSQCLFLEEHIREAGEQGEAALRDAKAKLVGLEEALQRNKERVAQLVKEHQELMNIKLALDVEILTYRKLMEGEESSLEQPIPAVISAVRSRPRPLSASARCHSRLFAGAGQGIPGSSPNGGGTKTLRGAQ
SIO_010081: LOC116800032
subclass of: SO_0000673
so part of: LOC116800032
location: join(558054..558202,558243..558873,565376..565590,568861..568921,570694..570789,572429..572593,573871..573996,575393..575613,576783..576838,576919..577028)
location: region:558054-577028:1
so has part: feature:558054-558202:1:exon
so has part: feature:558243-558873:1:exon
so has part: feature:565376-565590:1:exon
so has part: feature:568861-568921:1:exon
so has part: feature:570694-570789:1:exon
so has part: feature:572429-572593:1:exon
so has part: feature:573871-573996:1:exon
so has part: feature:575393-575613:1:exon
so has part: feature:576783-576838:1:exon
so has part: feature:576919-577028:1:exon

XP_032569447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:558054-558202:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:558243-558873:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:565376-565590:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:568861-568921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:570694-570789:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:572429-572593:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:573871-573996:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:575393-575613:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:576783-576838:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:576919-577028:1:exon

LOC116800032
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116800032
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: keratin, type II cytoskeletal 80-like isoform X1
translation: MLGLVSEKDTGTGEGPGIGTGGRRDWRRTRDWNERTGDWRRTRDWNRRTKGLEKDPGLEQEDTETRKGRARKGAGAAGASAFQGSCRGKEGRAGEGAGAHPGSRRCPRVTSAGPPCPAQGTSRRWNSLPARLSSHPPLRHSLPSQIHPSLGLFSPFFPPVRPVPSRPRAGAASRLMTNPSSAFAGGSLSSARGMSRARAAGPDEAATPEGPPRTPLGTAGPLRAPPAPSLAVDPELQELRRQEKDEIKALNNQFVTLIEKVQDLEQQNKVLTTRWNFLKEQDNSQSDADVRAIYEQFMGRMSQERKALSLEQENLERELEKVLGTMDAFRSKYEDEIRLCSGMEFTFMELKKDLDVSTLHRTELEVKLKGLQELMELKKSIYEQELQELLSELQDISVVLGIDPSCRVDLSRIVEDVRAQYESLARHSWHEAEALSRRKLSEGHSQAGTFGGHLLESRREIAELNIRIQKLRSGIVSQRSQCLFLEEHIREAGEQGEAALRDAKAKLVGLEEALQRNKERVAQLVKEHQELMNIKLALDVEILTYRKLMEGEESSLEQPIPAVISAVRSRPRPLSASARCHSRLFAGAGQGIPGSSPNGGGTKTLRGAQ
SIO_010081: LOC116800032
subclass of: SO_0000673
so part of: LOC116800032
location: join(558054..558202,558243..558873,565376..565590,568861..568921,570694..570789,572429..572593,573871..573996,575393..575613,576783..576838,576919..577028)
location: region:558054-577028:1
so has part: feature:558054-558202:1:exon
so has part: feature:558243-558873:1:exon
so has part: feature:565376-565590:1:exon
so has part: feature:568861-568921:1:exon
so has part: feature:570694-570789:1:exon
so has part: feature:572429-572593:1:exon
so has part: feature:573871-573996:1:exon
so has part: feature:575393-575613:1:exon
so has part: feature:576783-576838:1:exon
so has part: feature:576919-577028:1:exon

XP_032569448.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:558054-558202:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:558243-558873:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:565376-565590:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:568861-568921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:570694-570789:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:572429-572593:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:573871-573996:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:575393-575613:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:576783-576838:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:576919-577028:1:exon

LOC116800032
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116800032
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: keratin, type II cytoskeletal 80-like isoform X2
translation: MKGQGTGEGPGIGTGGRRDWKRIRDWNERTRGLEKDPGLEQEDTETRKGRARKGAGAAGASAFQGSCRGKEGRAGEGAGAHPGSRRCPRVTSAGPPCPAQGTSRRWNSLPARLSSHPPLRHSLPSQIHPSLGLFSPFFPPVRPVPSRPRAGAASRLMTNPSSAFAGGSLSSARGMSRARAAGPDEAATPEGPPRTPLGTAGPLRAPPAPSLAVDPELQELRRQEKDEIKALNNQFVTLIEKVQDLEQQNKVLTTRWNFLKEQDNSQSDADVRAIYEQFMGRMSQERKALSLEQENLERELEKVLGTMDAFRSKYEDEIRLCSGMEFTFMELKKDLDVSTLHRTELEVKLKGLQELMELKKSIYEQELQELLSELQDISVVLGIDPSCRVDLSRIVEDVRAQYESLARHSWHEAEALSRRKLSEGHSQAGTFGGHLLESRREIAELNIRIQKLRSGIVSQRSQCLFLEEHIREAGEQGEAALRDAKAKLVGLEEALQRNKERVAQLVKEHQELMNIKLALDVEILTYRKLMEGEESSLEQPIPAVISAVRSRPRPLSASARCHSRLFAGAGQGIPGSSPNGGGTKTLRGAQ
SIO_010081: LOC116800032
subclass of: SO_0000673
so part of: LOC116800032
location: join(558151..558873,565376..565590,568861..568921,570694..570789,572429..572593,573871..573996,575393..575613,576783..576838,576919..577028)
location: region:558151-577028:1
so has part: feature:558151-558873:1:exon
so has part: feature:565376-565590:1:exon
so has part: feature:568861-568921:1:exon
so has part: feature:570694-570789:1:exon
so has part: feature:572429-572593:1:exon
so has part: feature:573871-573996:1:exon
so has part: feature:575393-575613:1:exon
so has part: feature:576783-576838:1:exon
so has part: feature:576919-577028:1:exon

XP_032569449.1
type: Protein
SIO_000068: ncbiprotein

position:558151:1
position: 558151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558151-558873:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:565376-565590:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568861-568921:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:570694-570789:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:572429-572593:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:573871-573996:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:575393-575613:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:576783-576838:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:576919-577028:1:exon

LOC116800037
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116800037
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 559163..560087
location: region:559163-560087:1
so has part: feature:559163-560087:1:exon
subclass of: SO_0000011

116800037
type: Gene
SIO_000068: ncbigene

position:559163:1
position: 559163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560087:1
position: 560087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559163-560087:1:exon

LOC116800037
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116800037
product: uncharacterized LOC116800037, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004361161.1
SIO_010081: LOC116800037
subclass of: SO_0000673
so part of: LOC116800037
location: join(559163..559445,559509..559702,560024..560087)
location: region:559163-560087:1
so has part: feature:559163-559445:1:exon
so has part: feature:559509-559702:1:exon
so has part: feature:560024-560087:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:559163-559445:1:exon

position:559445:1
position: 559445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:559509-559702:1:exon

position:559509:1
position: 559509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559702:1
position: 559702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:560024-560087:1:exon

position:560024:1
position: 560024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116800037
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116800037
product: uncharacterized LOC116800037, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004361162.1
SIO_010081: LOC116800037
subclass of: SO_0000673
so part of: LOC116800037
location: join(559163..559445,559509..559702,559838..559891)
location: region:559163-559891:1
so has part: feature:559163-559445:1:exon
so has part: feature:559509-559702:1:exon
so has part: feature:559838-559891:1:exon

position:559891:1
position: 559891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559163-559445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:559509-559702:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:559838-559891:1:exon

position:559838:1
position: 559838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116800038
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116800038
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 560336..561242
location: region:560336-561242:1
so has part: feature:560336-561242:1:exon
subclass of: SO_0000011

116800038
type: Gene
SIO_000068: ncbigene

position:560336:1
position: 560336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561242:1
position: 561242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:560336-561242:1:exon

LOC116800038
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116800038
product: uncharacterized LOC116800038
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004361163.1
SIO_010081: LOC116800038
subclass of: SO_0000673
so part of: LOC116800038
location: join(560336..560414,560624..560719,561030..561242)
location: region:560336-561242:1
so has part: feature:560336-560414:1:exon
so has part: feature:560624-560719:1:exon
so has part: feature:561030-561242:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:560336-560414:1:exon

position:560414:1
position: 560414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:560624-560719:1:exon

position:560624:1
position: 560624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560719:1
position: 560719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:561030-561242:1:exon

position:561030:1
position: 561030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116800036
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116800036
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(590149..593317)
location: region:590149-593317:-1
so has part: feature:590149-593317:-1:exon
subclass of: SO_0000011

116800036
type: Gene
SIO_000068: ncbigene

position:590149:-1
position: 590149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593317:-1
position: 593317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590149-593317:-1:exon

LOC116800036
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116800036
product: uncharacterized LOC116800036, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004361158.1
SIO_010081: LOC116800036
subclass of: SO_0000673
so part of: LOC116800036
location: complement(join(590149..590291,591097..591364,593246..593317))
location: region:590149-593317:-1
so has part: feature:593246-593317:-1:exon
so has part: feature:591097-591364:-1:exon
so has part: feature:590149-590291:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:593246-593317:-1:exon

position:593246:-1
position: 593246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:591097-591364:-1:exon

position:591097:-1
position: 591097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591364:-1
position: 591364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:590149-590291:-1:exon

position:590291:-1
position: 590291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116800036
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116800036
product: uncharacterized LOC116800036, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004361157.1
SIO_010081: LOC116800036
subclass of: SO_0000673
so part of: LOC116800036
location: complement(join(590149..590291,591097..591364,592876..593017,593246..593306))
location: region:590149-593306:-1
so has part: feature:593246-593306:-1:exon
so has part: feature:592876-593017:-1:exon
so has part: feature:591097-591364:-1:exon
so has part: feature:590149-590291:-1:exon

position:593306:-1
position: 593306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:593246-593306:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:592876-593017:-1:exon

position:592876:-1
position: 592876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593017:-1
position: 593017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:591097-591364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:590149-590291:-1:exon

LOC116800036
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116800036
product: uncharacterized LOC116800036, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004361156.1
SIO_010081: LOC116800036
subclass of: SO_0000673
so part of: LOC116800036
location: complement(join(590149..590291,591097..591364,592876..593066,593246..593288))
location: region:590149-593288:-1
so has part: feature:593246-593288:-1:exon
so has part: feature:592876-593066:-1:exon
so has part: feature:591097-591364:-1:exon
so has part: feature:590149-590291:-1:exon

position:593288:-1
position: 593288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:593246-593288:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:592876-593066:-1:exon

position:593066:-1
position: 593066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:591097-591364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:590149-590291:-1:exon

LOC116800036
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116800036
product: uncharacterized LOC116800036, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004361160.1
SIO_010081: LOC116800036
subclass of: SO_0000673
so part of: LOC116800036
location: complement(join(590149..590291,591097..591364,592376..592402))
location: region:590149-592402:-1
so has part: feature:592376-592402:-1:exon
so has part: feature:591097-591364:-1:exon
so has part: feature:590149-590291:-1:exon

position:592402:-1
position: 592402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:592376-592402:-1:exon

position:592376:-1
position: 592376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:591097-591364:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:590149-590291:-1:exon

LOC116800036
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116800036
product: uncharacterized LOC116800036, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004361159.1
SIO_010081: LOC116800036
subclass of: SO_0000673
so part of: LOC116800036
location: complement(join(590741..590902,591097..591364,592876..593066,593246..593288))
location: region:590741-593288:-1
so has part: feature:593246-593288:-1:exon
so has part: feature:592876-593066:-1:exon
so has part: feature:591097-591364:-1:exon
so has part: feature:590741-590902:-1:exon

position:590741:-1
position: 590741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:593246-593288:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:592876-593066:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:591097-591364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:590741-590902:-1:exon

position:590902:-1
position: 590902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116800029
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116800029
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(628751..629912)
location: region:628751-629912:-1
so has part: feature:628751-629912:-1:exon
subclass of: SO_0000011

116800029
type: Gene
SIO_000068: ncbigene

position:628751:-1
position: 628751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:629912:-1
position: 629912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:628751-629912:-1:exon

LOC116800029
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116800029
product: uncharacterized LOC116800029
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004361155.1
SIO_010081: LOC116800029
subclass of: SO_0000673
so part of: LOC116800029
location: complement(join(628751..629380,629529..629912))
location: region:628751-629912:-1
so has part: feature:629529-629912:-1:exon
so has part: feature:628751-629380:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:629529-629912:-1:exon

position:629529:-1
position: 629529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:628751-629380:-1:exon

position:629380:-1
position: 629380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HDAC7
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 637402..702177
location: region:637402-702177:1
so has part: feature:637402-702177:1:exon
subclass of: SO_0000010

116800043
type: Gene
SIO_000068: ncbigene

position:637402:1
position: 637402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:702177:1
position: 702177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:637402-702177:1:exon

HDAC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: HDAC7
product: histone deacetylase 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032713576.1
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(637402..637634,670324..670523,673366..673456,676817..676928,677844..677959,678065..678187,679328..679437,681378..681500,682835..683081,684637..684848,685660..685869,686601..686820,687492..687625,689304..689424,690530..690579,693389..693496,694714..694769,694943..695030,695263..695382,696344..696441,696539..696657,698354..698487,699684..699768,700598..700739,701607..702177)
location: region:637402-702177:1
so has part: feature:637402-637634:1:exon
so has part: feature:670324-670523:1:exon
so has part: feature:673366-673456:1:exon
so has part: feature:676817-676928:1:exon
so has part: feature:677844-677959:1:exon
so has part: feature:678065-678187:1:exon
so has part: feature:679328-679437:1:exon
so has part: feature:681378-681500:1:exon
so has part: feature:682835-683081:1:exon
so has part: feature:684637-684848:1:exon
so has part: feature:685660-685869:1:exon
so has part: feature:686601-686820:1:exon
so has part: feature:687492-687625:1:exon
so has part: feature:689304-689424:1:exon
so has part: feature:690530-690579:1:exon
so has part: feature:693389-693496:1:exon
so has part: feature:694714-694769:1:exon
so has part: feature:694943-695030:1:exon
so has part: feature:695263-695382:1:exon
so has part: feature:696344-696441:1:exon
so has part: feature:696539-696657:1:exon
so has part: feature:698354-698487:1:exon
so has part: feature:699684-699768:1:exon
so has part: feature:700598-700739:1:exon
so has part: feature:701607-702177:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:637402-637634:1:exon

position:637634:1
position: 637634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:670324-670523:1:exon

position:670324:1
position: 670324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:670523:1
position: 670523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:673366-673456:1:exon

position:673366:1
position: 673366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:673456:1
position: 673456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:676817-676928:1:exon

position:676817:1
position: 676817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:676928:1
position: 676928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:677844-677959:1:exon

position:677844:1
position: 677844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677959:1
position: 677959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:678065-678187:1:exon

position:678065:1
position: 678065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678187:1
position: 678187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:679328-679437:1:exon

position:679328:1
position: 679328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:679437:1
position: 679437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:681378-681500:1:exon

position:681378:1
position: 681378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:681500:1
position: 681500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:682835-683081:1:exon

position:682835:1
position: 682835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:683081:1
position: 683081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:684637-684848:1:exon

position:684637:1
position: 684637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:684848:1
position: 684848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:685660-685869:1:exon

position:685660:1
position: 685660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685869:1
position: 685869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:686601-686820:1:exon

position:686601:1
position: 686601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:686820:1
position: 686820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:687492-687625:1:exon

position:687492:1
position: 687492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:687625:1
position: 687625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:689304-689424:1:exon

position:689304:1
position: 689304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:689424:1
position: 689424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:690530-690579:1:exon

position:690530:1
position: 690530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:690579:1
position: 690579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:693389-693496:1:exon

position:693389:1
position: 693389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:693496:1
position: 693496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:694714-694769:1:exon

position:694714:1
position: 694714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:694769:1
position: 694769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:694943-695030:1:exon

position:694943:1
position: 694943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:695030:1
position: 695030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:695263-695382:1:exon

position:695263:1
position: 695263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:695382:1
position: 695382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:696344-696441:1:exon

position:696344:1
position: 696344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:696441:1
position: 696441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:696539-696657:1:exon

position:696539:1
position: 696539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:696657:1
position: 696657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:698354-698487:1:exon

position:698354:1
position: 698354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:698487:1
position: 698487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:699684-699768:1:exon

position:699684:1
position: 699684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:699768:1
position: 699768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:700598-700739:1:exon

position:700598:1
position: 700598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:700739:1
position: 700739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:701607-702177:1:exon

position:701607:1
position: 701607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HDAC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 7
translation: MRSGGFPGAEPAGCSRLKGSLALGMFSPSSAVPPPCASPRGPQAVPMDLRLGQRVVKPGSDTALLTLKHTQQLQHQLFLASLHQQQVEQLAHQHVRVAMESPHHEAEPGQQEQELRQLLNKDKSKRSAVASTVVKQKLAEVILKKQQAALERSSNPNPAALPYRSLEPLDPEGAAPTVLSTFLPPVPSAPLDPPEHFPLRKTASEPNLKVRCKPRKCLERRKNPLTRKESAPPSLKRRPPEPIDSSPSSSSTPVSGCSSPNDSLPSEHGALPSAPGMAHEPPLAQRLRLQESSLAQFALQSAASLPALTLGLPTTATASARGESERRPLPSLAHRVPVLNGPVLPGTHPGTHPGTHPGTHPGTHPPLFLPASLEQHEPGGSLSPRLQPLIILEPSVTHAPLVAVPGLGTVPFPFGPSLIPAERLALPGHHKPLGRTRSEPLPQNPKAIQQQQLLFQQHHAQFLERLRQQTHLGKRVVKSSEKPRLRQIPSSEDMEAEGTLPEAGTEGTDPARTRGEPPRPGSSGKEPERTPKVLQPQDELLLQQAYLWDSYQRVQQQLLKRQPLDSPAVPTLPTGHRPLSRAQSSPATATVSLPAQDSAKGLALPVQEPPAKPHFTTGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRGRCECLRGRKATLEELQCVHSERHVFLYGTNPLNRLKLDNGKLAGILSQRMFVMLPCGGLGVDSDTIWNELHSSNAARWAAGSVTELAFRVATRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPEVLYISLHRHDDGNFFPGSGAADEVGSGPGEGFTVNVAWAGGLDPPMGDPEYLAAFRTVVMPIAHEFCPELVLVSAGFDAAEGHPPPLGGYRVSAKCFGYLTKQLMSLAGGAVVLALEGGHDLTAICDASEACVSALLGDQLDPLPEESLRQKPNPNAVRSLEAVIQAHRKYWVALQRFSSKLGCSFLEFQRDHEADEVETVTALASLSVAVLGDKRAPEEPMEEEEPMAQ
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(637547..637634,670324..670523,673366..673456,676817..676928,677844..677959,678065..678187,679328..679437,681378..681500,682835..683081,684637..684848,685660..685869,686601..686820,687492..687625,689304..689424,690530..690579,693389..693496,694714..694769,694943..695030,695263..695382,696344..696441,696539..696657,698354..698487,699684..699768,700598..700739,701607..701652)
location: region:637547-701652:1
so has part: feature:637547-637634:1:exon
so has part: feature:670324-670523:1:exon
so has part: feature:673366-673456:1:exon
so has part: feature:676817-676928:1:exon
so has part: feature:677844-677959:1:exon
so has part: feature:678065-678187:1:exon
so has part: feature:679328-679437:1:exon
so has part: feature:681378-681500:1:exon
so has part: feature:682835-683081:1:exon
so has part: feature:684637-684848:1:exon
so has part: feature:685660-685869:1:exon
so has part: feature:686601-686820:1:exon
so has part: feature:687492-687625:1:exon
so has part: feature:689304-689424:1:exon
so has part: feature:690530-690579:1:exon
so has part: feature:693389-693496:1:exon
so has part: feature:694714-694769:1:exon
so has part: feature:694943-695030:1:exon
so has part: feature:695263-695382:1:exon
so has part: feature:696344-696441:1:exon
so has part: feature:696539-696657:1:exon
so has part: feature:698354-698487:1:exon
so has part: feature:699684-699768:1:exon
so has part: feature:700598-700739:1:exon
so has part: feature:701607-701652:1:exon

XP_032569467.1
type: Protein
SIO_000068: ncbiprotein

position:637547:1
position: 637547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:701652:1
position: 701652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:637547-637634:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:670324-670523:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:673366-673456:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:676817-676928:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:677844-677959:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:678065-678187:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:679328-679437:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:681378-681500:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:682835-683081:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:684637-684848:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:685660-685869:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:686601-686820:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:687492-687625:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:689304-689424:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:690530-690579:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:693389-693496:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:694714-694769:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:694943-695030:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:695263-695382:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:696344-696441:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:696539-696657:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:698354-698487:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:699684-699768:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:700598-700739:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:701607-701652:1:exon

LOC116800069
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116800069
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 702215..703857
location: region:702215-703857:1
so has part: feature:702215-703857:1:exon
subclass of: SO_0000011

116800069
type: Gene
SIO_000068: ncbigene

position:702215:1
position: 702215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:703857:1
position: 703857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:702215-703857:1:exon

LOC116800069
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116800069
product: uncharacterized LOC116800069
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004361166.1
SIO_010081: LOC116800069
subclass of: SO_0000673
so part of: LOC116800069
location: join(702215..702526,702564..703002,703195..703857)
location: region:702215-703857:1
so has part: feature:702215-702526:1:exon
so has part: feature:702564-703002:1:exon
so has part: feature:703195-703857:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:702215-702526:1:exon

position:702526:1
position: 702526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:702564-703002:1:exon

position:702564:1
position: 702564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:703002:1
position: 703002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:703195-703857:1:exon

position:703195:1
position: 703195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116800062
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116800062
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(711216..711722)
location: region:711216-711722:-1
so has part: feature:711216-711722:-1:exon
subclass of: SO_0000010

116800062
type: Gene
SIO_000068: ncbigene

position:711216:-1
position: 711216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711722:-1
position: 711722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:711216-711722:-1:exon

LOC116800062
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116800062
product: twist-related protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
transcript id: XM_032713627.1
SIO_010081: LOC116800062
subclass of: SO_0000673
so part of: LOC116800062
location: complement(join(711216..711649,711683..711722))
location: region:711216-711722:-1
so has part: feature:711683-711722:-1:exon
so has part: feature:711216-711649:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:711683-711722:-1:exon

position:711683:-1
position: 711683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:711216-711649:-1:exon

position:711649:-1
position: 711649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116800062
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116800062
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: twist-related protein 2-like
translation: MKEENPESPPEGSKEEEEEERERMPGKCPRKRGQGRAGAEWPQGKRSKRGPAPAPPGEDGQAQRVLANVRERQRTQSLNDAFAELRKIIPTLPSDKLSKIQTLKLAARYIDFLRRVLGGDEPGPGAAPSCTSRARERLSYAFSVWRMEGARALSASH
SIO_010081: LOC116800062
subclass of: SO_0000673
so part of: LOC116800062
location: complement(join(711216..711649,711683..711722))
location: region:711216-711722:-1
so has part: feature:711683-711722:-1:exon
so has part: feature:711216-711649:-1:exon

XP_032569518.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:711683-711722:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:711216-711649:-1:exon

SLC48A1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: SLC48A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(719500..728598)
location: region:719500-728598:-1
so has part: feature:719500-728598:-1:exon
subclass of: SO_0000010

116800063
type: Gene
SIO_000068: ncbigene

position:719500:-1
position: 719500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728598:-1
position: 728598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:719500-728598:-1:exon

SLC48A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SLC48A1
product: solute carrier family 48 member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_032713629.1
SIO_010081: SLC48A1
subclass of: SO_0000673
so part of: SLC48A1
location: complement(join(719500..719677,721418..721585,728431..728598))
location: region:719500-728598:-1
so has part: feature:728431-728598:-1:exon
so has part: feature:721418-721585:-1:exon
so has part: feature:719500-719677:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:728431-728598:-1:exon

position:728431:-1
position: 728431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:721418-721585:-1:exon

position:721418:-1
position: 721418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:721585:-1
position: 721585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:719500-719677:-1:exon

position:719677:-1
position: 719677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC48A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SLC48A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heme transporter HRG1
translation: MALSAALALRVAYAAFGTLSGLSVFCVWSVVPALRQPSTAAAGGLAGVLALWALLTHVMYVQDYWRTWLKGLRFFLGVGIFFCALSLLGFCAFLALAITQRQALSDPRSYYLSAVWSFMALKWALLLSLYSRRYRAEFADISILSDF
SIO_010081: SLC48A1
subclass of: SO_0000673
so part of: SLC48A1
location: complement(join(719541..719677,721418..721585,728431..728569))
location: region:719541-728569:-1
so has part: feature:728431-728569:-1:exon
so has part: feature:721418-721585:-1:exon
so has part: feature:719541-719677:-1:exon

XP_032569520.1
type: Protein
SIO_000068: ncbiprotein

position:719541:-1
position: 719541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728569:-1
position: 728569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:728431-728569:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:721418-721585:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:719541-719677:-1:exon

LOC116800070
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116800070
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(724928..725867)
location: region:724928-725867:-1
so has part: feature:724928-725867:-1:exon
subclass of: SO_0000011

116800070
type: Gene
SIO_000068: ncbigene

position:724928:-1
position: 724928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:725867:-1
position: 725867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:724928-725867:-1:exon

LOC116800070
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116800070
product: uncharacterized LOC116800070, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004361167.1
SIO_010081: LOC116800070
subclass of: SO_0000673
so part of: LOC116800070
location: complement(join(724928..724996,725085..725407,725497..725672,725703..725867))
location: region:724928-725867:-1
so has part: feature:725703-725867:-1:exon
so has part: feature:725497-725672:-1:exon
so has part: feature:725085-725407:-1:exon
so has part: feature:724928-724996:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:725703-725867:-1:exon

position:725703:-1
position: 725703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:725497-725672:-1:exon

position:725497:-1
position: 725497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:725672:-1
position: 725672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:725085-725407:-1:exon

position:725085:-1
position: 725085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:725407:-1
position: 725407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:724928-724996:-1:exon

position:724996:-1
position: 724996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116800070
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116800070
product: uncharacterized LOC116800070, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004361168.1
SIO_010081: LOC116800070
subclass of: SO_0000673
so part of: LOC116800070
location: complement(join(724928..724996,725085..725461,725784..725798))
location: region:724928-725798:-1
so has part: feature:725784-725798:-1:exon
so has part: feature:725085-725461:-1:exon
so has part: feature:724928-724996:-1:exon

position:725798:-1
position: 725798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:725784-725798:-1:exon

position:725784:-1
position: 725784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:725085-725461:-1:exon

position:725461:-1
position: 725461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:724928-724996:-1:exon

LOC116800070
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116800070
product: uncharacterized LOC116800070, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004361169.1
SIO_010081: LOC116800070
subclass of: SO_0000673
so part of: LOC116800070
location: complement(join(724928..724996,725085..725461,725565..725576))
location: region:724928-725576:-1
so has part: feature:725565-725576:-1:exon
so has part: feature:725085-725461:-1:exon
so has part: feature:724928-724996:-1:exon

position:725576:-1
position: 725576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:725565-725576:-1:exon

position:725565:-1
position: 725565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:725085-725461:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:724928-724996:-1:exon

PDE1B
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: PDE1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 728568..741333
location: region:728568-741333:1
so has part: feature:728568-741333:1:exon
subclass of: SO_0000010

116799915
type: Gene
SIO_000068: ncbigene

position:728568:1
position: 728568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741333:1
position: 741333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:728568-741333:1:exon

PDE1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PDE1B
product: phosphodiesterase 1B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032713377.1
SIO_010081: PDE1B
subclass of: SO_0000673
so part of: PDE1B
location: join(728568..728644,731185..731310,734193..734294,735039..735159,736103..736184,737474..737600,738752..738888,741046..741153,741225..741333)
location: region:728568-741333:1
so has part: feature:728568-728644:1:exon
so has part: feature:731185-731310:1:exon
so has part: feature:734193-734294:1:exon
so has part: feature:735039-735159:1:exon
so has part: feature:736103-736184:1:exon
so has part: feature:737474-737600:1:exon
so has part: feature:738752-738888:1:exon
so has part: feature:741046-741153:1:exon
so has part: feature:741225-741333:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:728568-728644:1:exon

position:728644:1
position: 728644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:731185-731310:1:exon

position:731185:1
position: 731185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731310:1
position: 731310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:734193-734294:1:exon

position:734193:1
position: 734193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:734294:1
position: 734294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:735039-735159:1:exon

position:735039:1
position: 735039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:735159:1
position: 735159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:736103-736184:1:exon

position:736103:1
position: 736103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:736184:1
position: 736184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:737474-737600:1:exon

position:737474:1
position: 737474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:737600:1
position: 737600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:738752-738888:1:exon

position:738752:1
position: 738752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:738888:1
position: 738888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:741046-741153:1:exon

position:741046:1
position: 741046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741153:1
position: 741153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:741225-741333:1:exon

position:741225:1
position: 741225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PDE1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PDE1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B
translation: MADGWHRHRHRDTPPVLPTGTGNRPRSDCAILYNDRSVLENHHISAVFRMMQDDDMNIFVNLTKDEFSELRALVIEMVLATDMSCHFQQVKAMKTSLQQLERPDKSKVLSLLLHAADISHPTKAWAVHGRWTKALMEEFFRQGDKEAELGLPFSPLCDRTSTLVAQSQIGFIDFIVEPTFSVLSDVAEKMVLPLAEDGTKAKGDPAATPQASSQWRQQSLDEHLELGDIKADLAGFRSTWTRHIQENKQKWKERAASGITNQASIEELSPCEDPPAPSAHRENGDVE
SIO_010081: PDE1B
subclass of: SO_0000673
so part of: PDE1B
location: join(728568..728644,731185..731310,734193..734294,735039..735159,736103..736184,737474..737600,738752..738888,741046..741137)
location: region:728568-741137:1
so has part: feature:728568-728644:1:exon
so has part: feature:731185-731310:1:exon
so has part: feature:734193-734294:1:exon
so has part: feature:735039-735159:1:exon
so has part: feature:736103-736184:1:exon
so has part: feature:737474-737600:1:exon
so has part: feature:738752-738888:1:exon
so has part: feature:741046-741137:1:exon

XP_032569268.1
type: Protein
SIO_000068: ncbiprotein

position:741137:1
position: 741137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:728568-728644:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:731185-731310:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:734193-734294:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:735039-735159:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:736103-736184:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:737474-737600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:738752-738888:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:741046-741137:1:exon

LOC116800050
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116800050
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 743965..745602
location: region:743965-745602:1
so has part: feature:743965-745602:1:exon
subclass of: SO_0000010

116800050
type: Gene
SIO_000068: ncbigene

position:743965:1
position: 743965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:745602:1
position: 745602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743965-745602:1:exon

LOC116800050
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116800050
product: collagen alpha-1(VIII) chain-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032713594.1
SIO_010081: LOC116800050
subclass of: SO_0000673
so part of: LOC116800050
location: join(743965..744988,745025..745602)
location: region:743965-745602:1
so has part: feature:743965-744988:1:exon
so has part: feature:745025-745602:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:743965-744988:1:exon

position:744988:1
position: 744988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:745025-745602:1:exon

position:745025:1
position: 745025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116800050
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116800050
product: collagen alpha-1(VIII) chain-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032713595.1
SIO_010081: LOC116800050
subclass of: SO_0000673
so part of: LOC116800050
location: join(743965..744448,744518..745602)
location: region:743965-745602:1
so has part: feature:743965-744448:1:exon
so has part: feature:744518-745602:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:743965-744448:1:exon

position:744448:1
position: 744448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:744518-745602:1:exon

position:744518:1
position: 744518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116800050
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116800050
product: collagen alpha-1(VIII) chain-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032713597.1
SIO_010081: LOC116800050
subclass of: SO_0000673
so part of: LOC116800050
location: join(743965..744225,744422..745602)
location: region:743965-745602:1
so has part: feature:743965-744225:1:exon
so has part: feature:744422-745602:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:743965-744225:1:exon

position:744225:1
position: 744225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:744422-745602:1:exon

position:744422:1
position: 744422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116800050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116800050
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(VIII) chain-like isoform X3
translation: MGTLRHPSVPWASSGIPVCLGHPLASQIPVFLGHPLVSWICCALGIPWYPKSFTSWASCDLPVCSEHPLASWIHPDSGILWHPGSIVSPESFGILDPSCPRNPLASWIHHVPGILWHPGSIVSLESFGTPDPSCPWNPLASWIPHTLGILWHPGASWIPHTLGILWHPGASRICHTLGILWHPGSITPWESFGILDPSHLGNPLASWGIPDPSHLGNPLASWIRHTLGILWHPGSLTPRESFGILGHLGSLTPREPFGILGHPGSLTPRESFGILGHLGSLTPREPFGILGHPGVFRAPFGSIVSPESVGIPDLLCLGHPLASRMDPPHLGNPAASSWNSRSLLPLRPLRLQPRPPPRVCTSPPPVFPLLVSPLCPPRVPPPSPLAPRPSPPACVPPAPSPPLTSN
SIO_010081: LOC116800050
subclass of: SO_0000673
so part of: LOC116800050
location: join(744145..744225,744422..745561)
location: region:744145-745561:1
so has part: feature:744145-744225:1:exon
so has part: feature:744422-745561:1:exon

XP_032569488.1
type: Protein
SIO_000068: ncbiprotein

position:744145:1
position: 744145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:745561:1
position: 745561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:744145-744225:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:744422-745561:1:exon

LOC116800050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116800050
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(VIII) chain-like isoform X1
translation: MCLGHPPVSQCSLGTLQHPGIPWASSGIPVCLGHPLASQYSLGTLWYPGIPWASSGIPVFLGHPLVSWICCALGIPWYPKSFTSWASCDLPVCSEHPLASWIHPDSGILWHPGSIVSPESFGILDPSCPRNPLASWIHHVPGILWHPGSIVSLESFGTPDPSCPWNPLASWIPHTLGILWHPGASWIPHTLGILWHPGASRICHTLGILWHPGSITPWESFGILDPSHLGNPLASWGIPDPSHLGILWHPGSLTPRESFGILGHLGSLTPREPFGILGHPGSLTPRESFGILGHLGSLTPREPFGILGHPGVFRAPFGSIVSPESVGIPDLLCLGHPLASRMDPPHLGNPAASSWNSRSLLPLRPLRLQPRPPPRVCTSPPPVFPLLVSPLCPPRVPPPSPLAPRPSPPACVPPAPSPPLTSN
SIO_010081: LOC116800050
subclass of: SO_0000673
so part of: LOC116800050
location: join(744254..744988,745025..745561)
location: region:744254-745561:1
so has part: feature:744254-744988:1:exon
so has part: feature:745025-745561:1:exon

XP_032569485.1
type: Protein
SIO_000068: ncbiprotein

position:744254:1
position: 744254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:744254-744988:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:745025-745561:1:exon

LOC116800050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116800050
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(VIII) chain-like isoform X2
translation: MCLGHPPVSQCSLGTLQHPGIPWASSGIPVCLGHPLASQYSLGTLWYPGIPWASSGIPVFLGHPLDLPVCSEHPLASWIHPDSGILWHPGSIVSPESFGILDPSCPRNPLASWIHHVPGILWHPGSIVSLESFGTPDPSCPWNPLASWIPHTLGILWHPGASWIPHTLGILWHPGASRICHTLGILWHPGSITPWESFGILDPSHLGNPLASWGIPDPSHLGNPLASWIRHTLGILWHPGSLTPRESFGILGHLGSLTPREPFGILGHPGSLTPRESFGILGHLGSLTPREPFGILGHPGVFRAPFGSIVSPESVGIPDLLCLGHPLASRMDPPHLGNPAASSWNSRSLLPLRPLRLQPRPPPRVCTSPPPVFPLLVSPLCPPRVPPPSPLAPRPSPPACVPPAPSPPLTSN
SIO_010081: LOC116800050
subclass of: SO_0000673
so part of: LOC116800050
location: join(744254..744448,744518..745561)
location: region:744254-745561:1
so has part: feature:744254-744448:1:exon
so has part: feature:744518-745561:1:exon

XP_032569486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:744254-744448:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:744518-745561:1:exon

LOC116800060
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116800060
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(747509..759491)
location: region:747509-759491:-1
so has part: feature:747509-759491:-1:exon
subclass of: SO_0000010

116800060
type: Gene
SIO_000068: ncbigene

position:747509:-1
position: 747509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759491:-1
position: 759491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:747509-759491:-1:exon

LOC116800060
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116800060
product: protein phosphatase 1 regulatory subunit 1A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032713625.1
SIO_010081: LOC116800060
subclass of: SO_0000673
so part of: LOC116800060
location: complement(join(747509..747921,747980..747984,748020..748132,748539..748589,749052..749794,753005..753165,753260..753454,757039..757102,757221..757258,759193..759491))
location: region:747509-759491:-1
so has part: feature:759193-759491:-1:exon
so has part: feature:757221-757258:-1:exon
so has part: feature:757039-757102:-1:exon
so has part: feature:753260-753454:-1:exon
so has part: feature:753005-753165:-1:exon
so has part: feature:749052-749794:-1:exon
so has part: feature:748539-748589:-1:exon
so has part: feature:748020-748132:-1:exon
so has part: feature:747980-747984:-1:exon
so has part: feature:747509-747921:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:759193-759491:-1:exon

position:759193:-1
position: 759193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:757221-757258:-1:exon

position:757221:-1
position: 757221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:757258:-1
position: 757258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:757039-757102:-1:exon

position:757039:-1
position: 757039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:757102:-1
position: 757102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:753260-753454:-1:exon

position:753260:-1
position: 753260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:753454:-1
position: 753454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:753005-753165:-1:exon

position:753005:-1
position: 753005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:753165:-1
position: 753165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:749052-749794:-1:exon

position:749052:-1
position: 749052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:749794:-1
position: 749794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:748539-748589:-1:exon

position:748539:-1
position: 748539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:748589:-1
position: 748589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:748020-748132:-1:exon

position:748020:-1
position: 748020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:748132:-1
position: 748132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:747980-747984:-1:exon

position:747980:-1
position: 747980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:747984:-1
position: 747984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:747509-747921:-1:exon

position:747921:-1
position: 747921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116800060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116800060
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1 regulatory subunit 1A-like
translation: MAKPRVSGRGATALPRGQRGDSGGTGRLRVGAGGFGGAAGGPHCLLCPPPTPDSPPQIRRRRPTPANLVLSSDQSSPEIDEDRLPNPLLKSGLSMSPRQRKKVSRTTPTMKELQMMVEHHLCKRAQGEEEEEEEEEEEEEREEQGEVPPGRCHHGDTAHSHSPGGSCPLATHPPDQRTPGDGTPRAGTPRGGTSRAGTPKAGTPKAGTPRDGTRRVDAHIEPRGAASGQ
SIO_010081: LOC116800060
subclass of: SO_0000673
so part of: LOC116800060
location: complement(join(753005..753165,753260..753454,757039..757102,757221..757258,759193..759424))
location: region:753005-759424:-1
so has part: feature:759193-759424:-1:exon
so has part: feature:757221-757258:-1:exon
so has part: feature:757039-757102:-1:exon
so has part: feature:753260-753454:-1:exon
so has part: feature:753005-753165:-1:exon

XP_032569516.1
type: Protein
SIO_000068: ncbiprotein

position:759424:-1
position: 759424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:759193-759424:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:757221-757258:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:757039-757102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:753260-753454:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:753005-753165:-1:exon

NEUROD4
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: NEUROD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 799803..800888
location: region:799803-800888:1
so has part: feature:799803-800888:1:exon
subclass of: SO_0000010

116799916
type: Gene
SIO_000068: ncbigene

position:799803:1
position: 799803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:800888:1
position: 800888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:799803-800888:1:exon

NEUROD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: NEUROD4
product: neuronal differentiation 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 25 Proteins, and 11% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032713378.1
SIO_010081: NEUROD4
subclass of: SO_0000673
so part of: NEUROD4
location: 799803..800888
location: region:799803-800888:1
so has part: feature:799803-800888:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:799803-800888:1:exon

NEUROD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: NEUROD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurogenic differentiation factor 4
translation: MIFSARRAPFLLEFLPTSLSPRLQSSGNCKTFSEAEGMAELVSPPWADELGPKAEPREEEGAGAFAPGPGLNQERDSAEEEEEEEEEEEEEEEDGGGEKPKRRGPKKKKMTKARLERFRARRVKANARERTRMHGLNDALDNLRRVMPCYSKTQKLSKIETLRLARNYIWALSEVLETGQTPEGKSFVEMLCKGLSQPTSNLVVGCLQLGPQPLFLEKHEEKSPACEAALSGHPFSYQSPGLPSPPYGSLETHVLHLKPPPAFKGLVDAPFGAHPPDCSTPPYEGPLTPPLSISGNFSLKQDGSPELEKPYGFVTHYPGVGLAGAHGHGPPFQRYEIPLDVSYEPFAPHVAGPQLSTIFNE
SIO_010081: NEUROD4
subclass of: SO_0000673
so part of: NEUROD4
location: 799803..800888
location: region:799803-800888:1
so has part: feature:799803-800888:1:exon

XP_032569269.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:799803-800888:1:exon

ENDOU
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: ENDOU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(843050..856077)
location: region:843050-856077:-1
so has part: feature:843050-856077:-1:exon
subclass of: SO_0000010

116799917
type: Gene
SIO_000068: ncbigene

position:843050:-1
position: 843050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:856077:-1
position: 856077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:843050-856077:-1:exon

ENDOU
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ENDOU
product: endonuclease, poly(U) specific
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032713379.1
SIO_010081: ENDOU
subclass of: SO_0000673
so part of: ENDOU
location: complement(join(843050..843164,844669..844811,845834..845940,846016..846129,846311..846510,847062..847233,848984..849118,856020..856077))
location: region:843050-856077:-1
so has part: feature:856020-856077:-1:exon
so has part: feature:848984-849118:-1:exon
so has part: feature:847062-847233:-1:exon
so has part: feature:846311-846510:-1:exon
so has part: feature:846016-846129:-1:exon
so has part: feature:845834-845940:-1:exon
so has part: feature:844669-844811:-1:exon
so has part: feature:843050-843164:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:856020-856077:-1:exon

position:856020:-1
position: 856020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:848984-849118:-1:exon

position:848984:-1
position: 848984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:849118:-1
position: 849118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:847062-847233:-1:exon

position:847062:-1
position: 847062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:847233:-1
position: 847233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:846311-846510:-1:exon

position:846311:-1
position: 846311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846510:-1
position: 846510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:846016-846129:-1:exon

position:846016:-1
position: 846016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846129:-1
position: 846129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:845834-845940:-1:exon

position:845834:-1
position: 845834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845940:-1
position: 845940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:844669-844811:-1:exon

position:844669:-1
position: 844669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844811:-1
position: 844811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:843050-843164:-1:exon

position:843164:-1
position: 843164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ENDOU
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ENDOU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(U)-specific endoribonuclease
translation: MKTWILLVGAGIALGCVSGHLYTAPDSCEGRCGEAPSEEDECHCHPECGTRGSCCGDFHRHCRPGGFSRSRDSITERELLELSERLYGLDHNRARPGDIALNPQHRAGPGETGHGRDLSPQPLYKHVNEELFSKPTYSSFIKLLDNYQRATGREEEVTAEELREQDTFLGEAMATELMRTLFAFLREKNRYDSEQEFLEDLKGMWFGLYSRGDGEQDSSGFEHVFSGEVKKGKVSGFHNWIRFYLLEKQGTVNYLSHNFDGPWDTFPTVLGLQFSWDGFHKEVGSAFIGSSPEFELGLYTLCFLARPGRACHLSLGGHSLSIQTFPWTKSTYGGGRRFIATAYVMSP
SIO_010081: ENDOU
subclass of: SO_0000673
so part of: ENDOU
location: complement(join(843050..843164,844669..844811,845834..845940,846016..846129,846311..846510,847062..847233,848984..849118,856020..856077))
location: region:843050-856077:-1
so has part: feature:856020-856077:-1:exon
so has part: feature:848984-849118:-1:exon
so has part: feature:847062-847233:-1:exon
so has part: feature:846311-846510:-1:exon
so has part: feature:846016-846129:-1:exon
so has part: feature:845834-845940:-1:exon
so has part: feature:844669-844811:-1:exon
so has part: feature:843050-843164:-1:exon

XP_032569270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:856020-856077:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:848984-849118:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:847062-847233:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846311-846510:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:846016-846129:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:845834-845940:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:844669-844811:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:843050-843164:-1:exon

LOC116799918
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116799918
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(857328..858574)
location: region:857328-858574:-1
so has part: feature:857328-858574:-1:exon
subclass of: SO_0000010

116799918
type: Gene
SIO_000068: ncbigene

position:857328:-1
position: 857328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:858574:-1
position: 858574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:857328-858574:-1:exon

LOC116799918
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116799918
product: uncharacterized LOC116799918
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032713380.1
SIO_010081: LOC116799918
subclass of: SO_0000673
so part of: LOC116799918
location: complement(join(857328..857396,857504..857736,857915..858574))
location: region:857328-858574:-1
so has part: feature:857915-858574:-1:exon
so has part: feature:857504-857736:-1:exon
so has part: feature:857328-857396:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:857915-858574:-1:exon

position:857915:-1
position: 857915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:857504-857736:-1:exon

position:857504:-1
position: 857504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:857736:-1
position: 857736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:857328-857396:-1:exon

position:857396:-1
position: 857396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116799918
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116799918
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116799918
translation: MWVPGAGYGALEKDVGPWSWMWGPGEGCGALEKDVGPWSWMWGPGEGCEALELDVGPWSWMWGPGAGCGALEKDVGPWRRMWGPGAGCGALELDVGPWRRMWGPGAGCEALELDVGPWSWMWGPGEGCGALELDVGPWSWMWGPGEGCGALEKDVGPWSWMWGPGEGCGALEKDVGPWSWMWGPGEGCGALEKDVGPWSWMWGPGEGCGALEKDVGPWSRIWTLEHRCDPGAGMWTLEQDVTLEQGCGPWIRMWTLDQDVTLDQDVTLEQGCDPGAGMWTLEQDVTLEQGCDPGSGCGALEQDMDAGARM
SIO_010081: LOC116799918
subclass of: SO_0000673
so part of: LOC116799918
location: complement(join(857357..857396,857504..857736,857915..858574))
location: region:857357-858574:-1
so has part: feature:857915-858574:-1:exon
so has part: feature:857504-857736:-1:exon
so has part: feature:857357-857396:-1:exon

XP_032569271.1
type: Protein
SIO_000068: ncbiprotein

position:857357:-1
position: 857357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:857915-858574:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:857504-857736:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:857357-857396:-1:exon

RAPGEF3
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: RAPGEF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(857646..873032)
location: region:857646-873032:-1
so has part: feature:857646-873032:-1:exon
subclass of: SO_0000010

116799919
type: Gene
SIO_000068: ncbigene

position:857646:-1
position: 857646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:873032:-1
position: 873032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:857646-873032:-1:exon

RAPGEF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: RAPGEF3
product: Rap guanine nucleotide exchange factor 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032713381.1
SIO_010081: RAPGEF3
subclass of: SO_0000673
so part of: RAPGEF3
location: complement(join(857646..857716,858593..858883,859429..859500,860454..860508,861089..861153,861607..861694,861803..861853,863188..863278,864021..864202,865661..865786,866363..866460,866547..866693,867375..867456,869445..869484,870834..870910,870998..871148,872977..873032))
location: region:857646-873032:-1
so has part: feature:872977-873032:-1:exon
so has part: feature:870998-871148:-1:exon
so has part: feature:870834-870910:-1:exon
so has part: feature:869445-869484:-1:exon
so has part: feature:867375-867456:-1:exon
so has part: feature:866547-866693:-1:exon
so has part: feature:866363-866460:-1:exon
so has part: feature:865661-865786:-1:exon
so has part: feature:864021-864202:-1:exon
so has part: feature:863188-863278:-1:exon
so has part: feature:861803-861853:-1:exon
so has part: feature:861607-861694:-1:exon
so has part: feature:861089-861153:-1:exon
so has part: feature:860454-860508:-1:exon
so has part: feature:859429-859500:-1:exon
so has part: feature:858593-858883:-1:exon
so has part: feature:857646-857716:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:872977-873032:-1:exon

position:872977:-1
position: 872977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:870998-871148:-1:exon

position:870998:-1
position: 870998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:871148:-1
position: 871148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:870834-870910:-1:exon

position:870834:-1
position: 870834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:870910:-1
position: 870910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:869445-869484:-1:exon

position:869445:-1
position: 869445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:869484:-1
position: 869484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:867375-867456:-1:exon

position:867375:-1
position: 867375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:867456:-1
position: 867456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:866547-866693:-1:exon

position:866547:-1
position: 866547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:866693:-1
position: 866693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:866363-866460:-1:exon

position:866363:-1
position: 866363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:866460:-1
position: 866460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:865661-865786:-1:exon

position:865661:-1
position: 865661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:865786:-1
position: 865786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:864021-864202:-1:exon

position:864021:-1
position: 864021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864202:-1
position: 864202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:863188-863278:-1:exon

position:863188:-1
position: 863188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:863278:-1
position: 863278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:861803-861853:-1:exon

position:861803:-1
position: 861803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:861853:-1
position: 861853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:861607-861694:-1:exon

position:861607:-1
position: 861607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:861694:-1
position: 861694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:861089-861153:-1:exon

position:861089:-1
position: 861089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:861153:-1
position: 861153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:860454-860508:-1:exon

position:860454:-1
position: 860454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:860508:-1
position: 860508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:859429-859500:-1:exon

position:859429:-1
position: 859429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859500:-1
position: 859500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:858593-858883:-1:exon

position:858593:-1
position: 858593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:858883:-1
position: 858883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:857646-857716:-1:exon

position:857716:-1
position: 857716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RAPGEF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: RAPGEF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rap guanine nucleotide exchange factor 3
translation: MRSCPPDFGMNAGILEEGGFRSEPLEGSEQDKAAFALLKRRKILRLVSQWLLLYGRLLQGDRGTTALLQNLADLASRDPRLGGLGQEQERRRPRGLENGDGSGSPQPKARSAGPWLGSAEEAAPDGGCALRAQDKVPYEIYRADHSCLVSVLPVAASVREVLRALAPRLGGPGEHVLVKVNSSGDKARLPPDATGVFTALGLNERLFAVSLEELGGLTPHPEQLGPRVGSSETLDLLSSKELASHLTEHDWDLFRSIHQVEMIHYIVGPPRLPEVSAANLERALRRFQELQFWVATELCLCPDPARRARLLRKFIKVAAHLKEQKNLNSFFAVMFGISNTAVTRLARTWERLPHKIRKLHSALERMLDPSWNHRVYRLAVAKMSPPLIPFVPLLLKDMTFIHEGNRTWAENLINFEKMHMMAKTARVLQRCRGHAHPPLSPLRSRSPPRQEDPKALRISTCSEQSLGGRSPVSTWEFLQHLRAIDSQKELLRLSRDLEP
SIO_010081: RAPGEF3
subclass of: SO_0000673
so part of: RAPGEF3
location: complement(join(858765..858883,859429..859500,860454..860508,861089..861153,861607..861694,861803..861853,863188..863278,864021..864202,865661..865786,866363..866460,866547..866693,867375..867456,869445..869484,870834..870910,870998..871148,872977..873032))
location: region:858765-873032:-1
so has part: feature:872977-873032:-1:exon
so has part: feature:870998-871148:-1:exon
so has part: feature:870834-870910:-1:exon
so has part: feature:869445-869484:-1:exon
so has part: feature:867375-867456:-1:exon
so has part: feature:866547-866693:-1:exon
so has part: feature:866363-866460:-1:exon
so has part: feature:865661-865786:-1:exon
so has part: feature:864021-864202:-1:exon
so has part: feature:863188-863278:-1:exon
so has part: feature:861803-861853:-1:exon
so has part: feature:861607-861694:-1:exon
so has part: feature:861089-861153:-1:exon
so has part: feature:860454-860508:-1:exon
so has part: feature:859429-859500:-1:exon
so has part: feature:858765-858883:-1:exon

XP_032569272.1
type: Protein
SIO_000068: ncbiprotein

position:858765:-1
position: 858765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:872977-873032:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:870998-871148:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:870834-870910:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:869445-869484:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:867375-867456:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:866547-866693:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:866363-866460:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:865661-865786:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:864021-864202:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:863188-863278:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:861803-861853:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:861607-861694:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:861089-861153:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:860454-860508:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:859429-859500:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:858765-858883:-1:exon

HOXC4
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: HOXC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(922660..929296)
location: region:922660-929296:-1
so has part: feature:922660-929296:-1:exon
subclass of: SO_0000010

116799920
type: Gene
SIO_000068: ncbigene

position:922660:-1
position: 922660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:929296:-1
position: 929296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:922660-929296:-1:exon

HOXC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: HOXC4
product: homeobox C4
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 4 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins
transcript id: XM_032713382.1
SIO_010081: HOXC4
subclass of: SO_0000673
so part of: HOXC4
location: complement(join(922660..922719,927824..928167,928855..929296))
location: region:922660-929296:-1
so has part: feature:928855-929296:-1:exon
so has part: feature:927824-928167:-1:exon
so has part: feature:922660-922719:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:928855-929296:-1:exon

position:928855:-1
position: 928855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:927824-928167:-1:exon

position:927824:-1
position: 927824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:928167:-1
position: 928167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:922660-922719:-1:exon

position:922719:-1
position: 922719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: HOXC4
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 4 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: homeobox protein Hox-C4
translation: MIMSSYLMDSNYIDPKFPPCEEYSQNNYIPDHSPXYYSRTRESSYQHHHXELYPVPRPSFPTARSAAGGSRPPGNPAALQRGHGQTPGGQHLSEKAQQLCEQAALSTSSTTPSPAPPACNQPNPDHPTSTASXQPIVYPWMKKIHVSTVNPNYNGGEPXRSRTAYTRQQVLELEKEFHYNRYLTAARRIESAHSLCLSERQIKIWFQNRRMKWKKDHRLPNTKVRAAAAVPSAPTPPRPGELGRGRGAAPGAHPGPPLRGYPQPFAEDSGFQGAAKVVSRRV
SIO_010081: HOXC4
subclass of: SO_0000673
so part of: HOXC4
location: complement(join(922660..922719,927824..928167,928855..929296))
location: region:922660-929296:-1
so has part: feature:928855-929296:-1:exon
so has part: feature:927824-928167:-1:exon
so has part: feature:922660-922719:-1:exon

XP_032569273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:928855-929296:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:927824-928167:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:922660-922719:-1:exon

LOC116800072
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116800072
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(946563..948804)
location: region:946563-948804:-1
so has part: feature:946563-948804:-1:exon
subclass of: SO_0000011

116800072
type: Gene
SIO_000068: ncbigene

position:946563:-1
position: 946563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:948804:-1
position: 948804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:946563-948804:-1:exon

LOC116800072
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116800072
product: uncharacterized LOC116800072
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004361171.1
SIO_010081: LOC116800072
subclass of: SO_0000673
so part of: LOC116800072
location: complement(join(946563..946579,946755..946813,948792..948804))
location: region:946563-948804:-1
so has part: feature:948792-948804:-1:exon
so has part: feature:946755-946813:-1:exon
so has part: feature:946563-946579:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:948792-948804:-1:exon

position:948792:-1
position: 948792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:946755-946813:-1:exon

position:946755:-1
position: 946755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:946813:-1
position: 946813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:946563-946579:-1:exon

position:946579:-1
position: 946579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXC5
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: HOXC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(954218..956011)
location: region:954218-956011:-1
so has part: feature:954218-956011:-1:exon
subclass of: SO_0000010

116800061
type: Gene
SIO_000068: ncbigene

position:954218:-1
position: 954218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:956011:-1
position: 956011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:954218-956011:-1:exon

HOXC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: HOXC5
product: homeobox C5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 38% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032713626.1
SIO_010081: HOXC5
subclass of: SO_0000673
so part of: HOXC5
location: complement(join(954218..954432,955552..956011))
location: region:954218-956011:-1
so has part: feature:955552-956011:-1:exon
so has part: feature:954218-954432:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:955552-956011:-1:exon

position:955552:-1
position: 955552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:954218-954432:-1:exon

position:954432:-1
position: 954432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: HOXC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C5
translation: MSSYVANSFYKQSPPVPAYSMQSYGNYGSAAAVPPPGCRRRGSDLSGPLPSAAASSPGGSAMSGTPRAEAEPPPCPLLGPAGHPLARDERPAGRKPGIYGARSATAPREERAKSAAEIKAEPAAPAAQQGAPQLQQQQPPQIYPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSKLKSKEAL
SIO_010081: HOXC5
subclass of: SO_0000673
so part of: HOXC5
location: complement(join(954218..954432,955552..956011))
location: region:954218-956011:-1
so has part: feature:955552-956011:-1:exon
so has part: feature:954218-954432:-1:exon

XP_032569517.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:955552-956011:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:954218-954432:-1:exon

HOXC6
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: HOXC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(960140..961796)
location: region:960140-961796:-1
so has part: feature:960140-961796:-1:exon
subclass of: SO_0000010

116800057
type: Gene
SIO_000068: ncbigene

position:960140:-1
position: 960140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:961796:-1
position: 961796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:960140-961796:-1:exon

HOXC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: HOXC6
product: homeobox C6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 13 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032713622.1
SIO_010081: HOXC6
subclass of: SO_0000673
so part of: HOXC6
location: complement(join(960140..960477,961261..961796))
location: region:960140-961796:-1
so has part: feature:961261-961796:-1:exon
so has part: feature:960140-960477:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:961261-961796:-1:exon

position:961261:-1
position: 961261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:960140-960477:-1:exon

position:960477:-1
position: 960477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: HOXC6
product: homeobox C6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 23 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032713623.1
SIO_010081: HOXC6
subclass of: SO_0000673
so part of: HOXC6
location: complement(join(960140..960453,961261..961660))
location: region:960140-961660:-1
so has part: feature:961261-961660:-1:exon
so has part: feature:960140-960453:-1:exon

position:961660:-1
position: 961660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:961261-961660:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:960140-960453:-1:exon

position:960453:-1
position: 960453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: HOXC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C6 isoform X2
translation: MNSYFTNPSLSCHLTSGQEVLPNVALNSTAYDPVRHFSTYGAAVAQNRIYSSPFYSPQDNVVFSSSRGPYDYGSNAFYQEKDMLSSCRQNSMGHNTQTSIAQDFTSDQNRNTSQEQKTSIQIYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKESNLSSTLSGAGGGAAAAAADSLAKEEKREETEEEKQKE
SIO_010081: HOXC6
subclass of: SO_0000673
so part of: HOXC6
location: complement(join(960140..960453,961261..961660))
location: region:960140-961660:-1
so has part: feature:961261-961660:-1:exon
so has part: feature:960140-960453:-1:exon

XP_032569514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:961261-961660:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:960140-960453:-1:exon

HOXC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: HOXC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C6 isoform X1
translation: MNSYFTNPSLSCHLTSGQEVLPNVALNSTAYDPVRHFSTYGAAVAQNRIYSSPFYSPQDNVVFSSSRGPYDYGSNAFYQEKDMLSSCRQNSMGHNTQTSIAQDFTSDQNRNTSQEQKTSIQIYPWMQRMNSHSVCFVSASLGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKESNLSSTLSGAGGGAAAAAADSLAKEEKREETEEEKQKE
SIO_010081: HOXC6
subclass of: SO_0000673
so part of: HOXC6
location: complement(join(960140..960477,961261..961660))
location: region:960140-961660:-1
so has part: feature:961261-961660:-1:exon
so has part: feature:960140-960477:-1:exon

XP_032569513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:961261-961660:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:960140-960477:-1:exon

HOXC8
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: HOXC8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(983121..986123)
location: region:983121-986123:-1
so has part: feature:983121-986123:-1:exon
subclass of: SO_0000010

116800058
type: Gene
SIO_000068: ncbigene

position:983121:-1
position: 983121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:986123:-1
position: 986123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:983121-986123:-1:exon

HOXC8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: HOXC8
product: homeobox C8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032713624.1
SIO_010081: HOXC8
subclass of: SO_0000673
so part of: HOXC8
location: complement(join(983121..983510,985688..986123))
location: region:983121-986123:-1
so has part: feature:985688-986123:-1:exon
so has part: feature:983121-983510:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:985688-986123:-1:exon

position:985688:-1
position: 985688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:983121-983510:-1:exon

position:983510:-1
position: 983510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HOXC8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: HOXC8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C8
translation: MSSYFVNPLFSKYKGGESLEPTYYDCRFPQSVSRSHALVYGPGTTAPTFQHPSHHVQEFFHHGTSSISNSGYQQNPCALACHGDASKFYGYEALPRQSLYGAQQETTVVQYPDCKSSSNSNSSEGQGHLNQNSSPSLMFPWMRPHAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKLPGARDEEKTEEEGNEEEEKEEEEKEESKD
SIO_010081: HOXC8
subclass of: SO_0000673
so part of: HOXC8
location: complement(join(983218..983510,985688..986123))
location: region:983218-986123:-1
so has part: feature:985688-986123:-1:exon
so has part: feature:983218-983510:-1:exon

XP_032569515.1
type: Protein
SIO_000068: ncbiprotein

position:983218:-1
position: 983218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:985688-986123:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:983218-983510:-1:exon

ATP5MC2
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: ATP5MC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1041984..1044114
location: region:1041984-1044114:1
so has part: feature:1041984-1044114:1:exon
subclass of: SO_0000010

116800065
type: Gene
SIO_000068: ncbigene

position:1041984:1
position: 1041984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1044114:1
position: 1044114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1041984-1044114:1:exon

ATP5MC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ATP5MC2
product: ATP synthase membrane subunit c locus 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_032713631.1
SIO_010081: ATP5MC2
subclass of: SO_0000673
so part of: ATP5MC2
location: join(1041984..1042038,1042725..1042825,1043280..1043357,1043612..1043772,1043858..1044114)
location: region:1041984-1044114:1
so has part: feature:1041984-1042038:1:exon
so has part: feature:1042725-1042825:1:exon
so has part: feature:1043280-1043357:1:exon
so has part: feature:1043612-1043772:1:exon
so has part: feature:1043858-1044114:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1041984-1042038:1:exon

position:1042038:1
position: 1042038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1042725-1042825:1:exon

position:1042725:1
position: 1042725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1042825:1
position: 1042825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1043280-1043357:1:exon

position:1043280:1
position: 1043280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1043357:1
position: 1043357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1043612-1043772:1:exon

position:1043612:1
position: 1043612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1043772:1
position: 1043772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1043858-1044114:1:exon

position:1043858:1
position: 1043858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATP5MC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ATP5MC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase F(0) complex subunit C2, mitochondrial
translation: MFTCAKFVSAPALVRRSSRVLGQPLSSAVLSSPEARPEQVQAGAPRTLRTSAAHRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM
SIO_010081: ATP5MC2
subclass of: SO_0000673
so part of: ATP5MC2
location: join(1042787..1042825,1043280..1043357,1043612..1043772,1043858..1043972)
location: region:1042787-1043972:1
so has part: feature:1042787-1042825:1:exon
so has part: feature:1043280-1043357:1:exon
so has part: feature:1043612-1043772:1:exon
so has part: feature:1043858-1043972:1:exon

XP_032569522.1
type: Protein
SIO_000068: ncbiprotein

position:1042787:1
position: 1042787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1043972:1
position: 1043972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1042787-1042825:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1043280-1043357:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1043612-1043772:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1043858-1043972:1:exon

LOC116800047
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116800047
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1044723..1104021
location: region:1044723-1104021:1
so has part: feature:1044723-1104021:1:exon
subclass of: SO_0000010

116800047
type: Gene
SIO_000068: ncbigene

position:1044723:1
position: 1044723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1104021:1
position: 1104021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1044723-1104021:1:exon

LOC116800047
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116800047
product: cyclic AMP-dependent transcription factor ATF-7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 long SRA read, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032713586.1
SIO_010081: LOC116800047
subclass of: SO_0000673
so part of: LOC116800047
location: join(1044723..1044787,1061903..1061971,1084628..1084724,1087714..1087832,1090415..1090549,1091031..1091188,1093623..1093722,1094809..1094922,1096085..1096231,1097009..1097206,1098382..1098490,1101051..1104021)
location: region:1044723-1104021:1
so has part: feature:1044723-1044787:1:exon
so has part: feature:1061903-1061971:1:exon
so has part: feature:1084628-1084724:1:exon
so has part: feature:1087714-1087832:1:exon
so has part: feature:1090415-1090549:1:exon
so has part: feature:1091031-1091188:1:exon
so has part: feature:1093623-1093722:1:exon
so has part: feature:1094809-1094922:1:exon
so has part: feature:1096085-1096231:1:exon
so has part: feature:1097009-1097206:1:exon
so has part: feature:1098382-1098490:1:exon
so has part: feature:1101051-1104021:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1044723-1044787:1:exon

position:1044787:1
position: 1044787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1061903-1061971:1:exon

position:1061903:1
position: 1061903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1061971:1
position: 1061971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1084628-1084724:1:exon

position:1084628:1
position: 1084628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1084724:1
position: 1084724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1087714-1087832:1:exon

position:1087714:1
position: 1087714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1087832:1
position: 1087832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1090415-1090549:1:exon

position:1090415:1
position: 1090415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1090549:1
position: 1090549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1091031-1091188:1:exon

position:1091031:1
position: 1091031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1091188:1
position: 1091188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1093623-1093722:1:exon

position:1093623:1
position: 1093623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1093722:1
position: 1093722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1094809-1094922:1:exon

position:1094809:1
position: 1094809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1094922:1
position: 1094922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1096085-1096231:1:exon

position:1096085:1
position: 1096085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1096231:1
position: 1096231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1097009-1097206:1:exon

position:1097009:1
position: 1097009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1097206:1
position: 1097206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1098382-1098490:1:exon

position:1098382:1
position: 1098382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1098490:1
position: 1098490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1101051-1104021:1:exon

position:1101051:1
position: 1101051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116800047
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116800047
product: cyclic AMP-dependent transcription factor ATF-7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032713587.1
SIO_010081: LOC116800047
subclass of: SO_0000673
so part of: LOC116800047
location: join(1052130..1052282,1061903..1061971,1084628..1084724,1087714..1087832,1090415..1090549,1091031..1091188,1093623..1093722,1094809..1094922,1096085..1096231,1097009..1097206,1098382..1098490,1101051..1104021)
location: region:1052130-1104021:1
so has part: feature:1052130-1052282:1:exon
so has part: feature:1061903-1061971:1:exon
so has part: feature:1084628-1084724:1:exon
so has part: feature:1087714-1087832:1:exon
so has part: feature:1090415-1090549:1:exon
so has part: feature:1091031-1091188:1:exon
so has part: feature:1093623-1093722:1:exon
so has part: feature:1094809-1094922:1:exon
so has part: feature:1096085-1096231:1:exon
so has part: feature:1097009-1097206:1:exon
so has part: feature:1098382-1098490:1:exon
so has part: feature:1101051-1104021:1:exon

position:1052130:1
position: 1052130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1052130-1052282:1:exon

position:1052282:1
position: 1052282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1061903-1061971:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084628-1084724:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1087714-1087832:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1090415-1090549:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1091031-1091188:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1093623-1093722:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1094809-1094922:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1096085-1096231:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1097009-1097206:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1098382-1098490:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1101051-1104021:1:exon

LOC116800047
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116800047
product: cyclic AMP-dependent transcription factor ATF-7, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032713588.1
SIO_010081: LOC116800047
subclass of: SO_0000673
so part of: LOC116800047
location: join(1058174..1058195,1061903..1061971,1084628..1084724,1087714..1087832,1090415..1090549,1091031..1091188,1093623..1093722,1094809..1094922,1096085..1096231,1097009..1097206,1098382..1098490,1101051..1104021)
location: region:1058174-1104021:1
so has part: feature:1058174-1058195:1:exon
so has part: feature:1061903-1061971:1:exon
so has part: feature:1084628-1084724:1:exon
so has part: feature:1087714-1087832:1:exon
so has part: feature:1090415-1090549:1:exon
so has part: feature:1091031-1091188:1:exon
so has part: feature:1093623-1093722:1:exon
so has part: feature:1094809-1094922:1:exon
so has part: feature:1096085-1096231:1:exon
so has part: feature:1097009-1097206:1:exon
so has part: feature:1098382-1098490:1:exon
so has part: feature:1101051-1104021:1:exon

position:1058174:1
position: 1058174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1058174-1058195:1:exon

position:1058195:1
position: 1058195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1061903-1061971:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084628-1084724:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1087714-1087832:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1090415-1090549:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1091031-1091188:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1093623-1093722:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1094809-1094922:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1096085-1096231:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1097009-1097206:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1098382-1098490:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1101051-1104021:1:exon

LOC116800047
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116800047
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-7
translation: MGDDRPFVCGAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARTDSVIIADQTPTPTRFLKNCEEVGLFNELASSFEHEFKKAAEDDEKKSAGALDMSLPSTPEIKIKEEEPVEVDSSPPDSPVSHPRSPQHKEKEIPSKPVILSTPTPTIVRPGSLPLHLGYDPLHPTLPSPTSVITQAPPSNRQLGSPTGSLPLVVQLANGQTVPVLPGPPVQMPSVISLARPMSMVPNIPGIPGPPINSSGSISPSGLPVHSEAKMRLKASLTASSSLNGSNLVVGSASTMVTARPEQSQILVQHPDAPSPAQPQVSPAQPTPSTGGRRKRTVDEDPDERRQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTTQNIQLSNEVTLLRNEVAQLKQLLLAHKDCPVTALQKKTQGYLESPKESSEPTGSPAPVIQHSSASAAPNGLSVRSAAEAVATSVLTQMAGQRTELGLPSHVIMAPQSQSAGR
SIO_010081: LOC116800047
subclass of: SO_0000673
so part of: LOC116800047
location: join(1061924..1061971,1084628..1084724,1087714..1087832,1090415..1090549,1091031..1091188,1093623..1093722,1094809..1094922,1096085..1096231,1097009..1097206,1098382..1098490,1101051..1101262)
location: region:1061924-1101262:1
so has part: feature:1061924-1061971:1:exon
so has part: feature:1084628-1084724:1:exon
so has part: feature:1087714-1087832:1:exon
so has part: feature:1090415-1090549:1:exon
so has part: feature:1091031-1091188:1:exon
so has part: feature:1093623-1093722:1:exon
so has part: feature:1094809-1094922:1:exon
so has part: feature:1096085-1096231:1:exon
so has part: feature:1097009-1097206:1:exon
so has part: feature:1098382-1098490:1:exon
so has part: feature:1101051-1101262:1:exon

XP_032569477.1
type: Protein
SIO_000068: ncbiprotein

position:1061924:1
position: 1061924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1101262:1
position: 1101262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1061924-1061971:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1084628-1084724:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1087714-1087832:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1090415-1090549:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1091031-1091188:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1093623-1093722:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1094809-1094922:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1096085-1096231:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1097009-1097206:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1098382-1098490:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1101051-1101262:1:exon

LOC116800047
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116800047
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-7
translation: MGDDRPFVCGAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARTDSVIIADQTPTPTRFLKNCEEVGLFNELASSFEHEFKKAAEDDEKKSAGALDMSLPSTPEIKIKEEEPVEVDSSPPDSPVSHPRSPQHKEKEIPSKPVILSTPTPTIVRPGSLPLHLGYDPLHPTLPSPTSVITQAPPSNRQLGSPTGSLPLVVQLANGQTVPVLPGPPVQMPSVISLARPMSMVPNIPGIPGPPINSSGSISPSGLPVHSEAKMRLKASLTASSSLNGSNLVVGSASTMVTARPEQSQILVQHPDAPSPAQPQVSPAQPTPSTGGRRKRTVDEDPDERRQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTTQNIQLSNEVTLLRNEVAQLKQLLLAHKDCPVTALQKKTQGYLESPKESSEPTGSPAPVIQHSSASAAPNGLSVRSAAEAVATSVLTQMAGQRTELGLPSHVIMAPQSQSAGR
SIO_010081: LOC116800047
subclass of: SO_0000673
so part of: LOC116800047
location: join(1061924..1061971,1084628..1084724,1087714..1087832,1090415..1090549,1091031..1091188,1093623..1093722,1094809..1094922,1096085..1096231,1097009..1097206,1098382..1098490,1101051..1101262)
location: region:1061924-1101262:1
so has part: feature:1061924-1061971:1:exon
so has part: feature:1084628-1084724:1:exon
so has part: feature:1087714-1087832:1:exon
so has part: feature:1090415-1090549:1:exon
so has part: feature:1091031-1091188:1:exon
so has part: feature:1093623-1093722:1:exon
so has part: feature:1094809-1094922:1:exon
so has part: feature:1096085-1096231:1:exon
so has part: feature:1097009-1097206:1:exon
so has part: feature:1098382-1098490:1:exon
so has part: feature:1101051-1101262:1:exon

XP_032569478.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1061924-1061971:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1084628-1084724:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1087714-1087832:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1090415-1090549:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1091031-1091188:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1093623-1093722:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1094809-1094922:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1096085-1096231:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1097009-1097206:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1098382-1098490:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1101051-1101262:1:exon

LOC116800047
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116800047
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-7
translation: MGDDRPFVCGAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARTDSVIIADQTPTPTRFLKNCEEVGLFNELASSFEHEFKKAAEDDEKKSAGALDMSLPSTPEIKIKEEEPVEVDSSPPDSPVSHPRSPQHKEKEIPSKPVILSTPTPTIVRPGSLPLHLGYDPLHPTLPSPTSVITQAPPSNRQLGSPTGSLPLVVQLANGQTVPVLPGPPVQMPSVISLARPMSMVPNIPGIPGPPINSSGSISPSGLPVHSEAKMRLKASLTASSSLNGSNLVVGSASTMVTARPEQSQILVQHPDAPSPAQPQVSPAQPTPSTGGRRKRTVDEDPDERRQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTTQNIQLSNEVTLLRNEVAQLKQLLLAHKDCPVTALQKKTQGYLESPKESSEPTGSPAPVIQHSSASAAPNGLSVRSAAEAVATSVLTQMAGQRTELGLPSHVIMAPQSQSAGR
SIO_010081: LOC116800047
subclass of: SO_0000673
so part of: LOC116800047
location: join(1061924..1061971,1084628..1084724,1087714..1087832,1090415..1090549,1091031..1091188,1093623..1093722,1094809..1094922,1096085..1096231,1097009..1097206,1098382..1098490,1101051..1101262)
location: region:1061924-1101262:1
so has part: feature:1061924-1061971:1:exon
so has part: feature:1084628-1084724:1:exon
so has part: feature:1087714-1087832:1:exon
so has part: feature:1090415-1090549:1:exon
so has part: feature:1091031-1091188:1:exon
so has part: feature:1093623-1093722:1:exon
so has part: feature:1094809-1094922:1:exon
so has part: feature:1096085-1096231:1:exon
so has part: feature:1097009-1097206:1:exon
so has part: feature:1098382-1098490:1:exon
so has part: feature:1101051-1101262:1:exon

XP_032569479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1061924-1061971:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1084628-1084724:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1087714-1087832:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1090415-1090549:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1091031-1091188:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1093623-1093722:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1094809-1094922:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1096085-1096231:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1097009-1097206:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1098382-1098490:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1101051-1101262:1:exon

LOC116799921
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116799921
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1106953..1107836
location: region:1106953-1107836:1
so has part: feature:1106953-1107836:1:exon
subclass of: SO_0000010

116799921
type: Gene
SIO_000068: ncbigene

position:1106953:1
position: 1106953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1107836:1
position: 1107836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1106953-1107836:1:exon

LOC116799921
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116799921
product: neural Wiskott-Aldrich syndrome protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 54% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032713383.1
SIO_010081: LOC116799921
subclass of: SO_0000673
so part of: LOC116799921
location: join(1106953..1107071,1107184..1107299,1107520..1107836)
location: region:1106953-1107836:1
so has part: feature:1106953-1107071:1:exon
so has part: feature:1107184-1107299:1:exon
so has part: feature:1107520-1107836:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1106953-1107071:1:exon

position:1107071:1
position: 1107071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1107184-1107299:1:exon

position:1107184:1
position: 1107184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1107299:1
position: 1107299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1107520-1107836:1:exon

position:1107520:1
position: 1107520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116799921
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116799921
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neural Wiskott-Aldrich syndrome protein-like
translation: MTGRPALLLLLLLLAGTPRSARCCPGTLDPAPVSPGPAAPPPPPPPRGRPPPPPPPWARCSGPCNAPAAPPGPSSSPRARSHLSHPPVHSHPAIPPVPILSPPGLSGTVSPGRSGWGPQGGAQARLSPRSWDPPLAPFWTMATPQRFGRRR
SIO_010081: LOC116799921
subclass of: SO_0000673
so part of: LOC116799921
location: join(1106953..1107071,1107184..1107299,1107520..1107740)
location: region:1106953-1107740:1
so has part: feature:1106953-1107071:1:exon
so has part: feature:1107184-1107299:1:exon
so has part: feature:1107520-1107740:1:exon

XP_032569274.1
type: Protein
SIO_000068: ncbiprotein

position:1107740:1
position: 1107740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1106953-1107071:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1107184-1107299:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1107520-1107740:1:exon

TARBP2
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: TARBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1107960..1113438)
location: region:1107960-1113438:-1
so has part: feature:1107960-1113438:-1:exon
subclass of: SO_0000010

116800055
type: Gene
SIO_000068: ncbigene

position:1107960:-1
position: 1107960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1113438:-1
position: 1113438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1107960-1113438:-1:exon

TARBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: TARBP2
product: TARBP2 subunit of RISC loading complex, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032713616.1
SIO_010081: TARBP2
subclass of: SO_0000673
so part of: TARBP2
location: complement(join(1107960..1108374,1108788..1108977,1109271..1109398,1109501..1109618,1109935..1110007,1110155..1110238,1110778..1110877,1111545..1111714,1113279..1113438))
location: region:1107960-1113438:-1
so has part: feature:1113279-1113438:-1:exon
so has part: feature:1111545-1111714:-1:exon
so has part: feature:1110778-1110877:-1:exon
so has part: feature:1110155-1110238:-1:exon
so has part: feature:1109935-1110007:-1:exon
so has part: feature:1109501-1109618:-1:exon
so has part: feature:1109271-1109398:-1:exon
so has part: feature:1108788-1108977:-1:exon
so has part: feature:1107960-1108374:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1113279-1113438:-1:exon

position:1113279:-1
position: 1113279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1111545-1111714:-1:exon

position:1111545:-1
position: 1111545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1111714:-1
position: 1111714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1110778-1110877:-1:exon

position:1110778:-1
position: 1110778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1110877:-1
position: 1110877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1110155-1110238:-1:exon

position:1110155:-1
position: 1110155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1110238:-1
position: 1110238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1109935-1110007:-1:exon

position:1109935:-1
position: 1109935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1110007:-1
position: 1110007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1109501-1109618:-1:exon

position:1109501:-1
position: 1109501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1109618:-1
position: 1109618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1109271-1109398:-1:exon

position:1109271:-1
position: 1109271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1109398:-1
position: 1109398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1108788-1108977:-1:exon

position:1108788:-1
position: 1108788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1108977:-1
position: 1108977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1107960-1108374:-1:exon

position:1108374:-1
position: 1108374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TARBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: TARBP2
product: TARBP2 subunit of RISC loading complex, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 long SRA reads, 15 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032713614.1
SIO_010081: TARBP2
subclass of: SO_0000673
so part of: TARBP2
location: complement(join(1107960..1108374,1108788..1108977,1109271..1109398,1109501..1109618,1109935..1110007,1110155..1110238,1110778..1110877,1111545..1111714,1112609..1112682))
location: region:1107960-1112682:-1
so has part: feature:1112609-1112682:-1:exon
so has part: feature:1111545-1111714:-1:exon
so has part: feature:1110778-1110877:-1:exon
so has part: feature:1110155-1110238:-1:exon
so has part: feature:1109935-1110007:-1:exon
so has part: feature:1109501-1109618:-1:exon
so has part: feature:1109271-1109398:-1:exon
so has part: feature:1108788-1108977:-1:exon
so has part: feature:1107960-1108374:-1:exon

position:1112682:-1
position: 1112682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1112609-1112682:-1:exon

position:1112609:-1
position: 1112609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1111545-1111714:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1110778-1110877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1110155-1110238:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1109935-1110007:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1109501-1109618:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1109271-1109398:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1108788-1108977:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1107960-1108374:-1:exon

TARBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: TARBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RISC-loading complex subunit TARBP2 isoform X1
translation: MSEEGAGGARRSGGAFPSLEQMVAASPGKTPISLLQEYGTRLGRTPGYDLLKAEGQAHQPNFTFRVTLGDISCTGQGPSKKAAKHKAAEVALRLLRGGGAMLEPPEHSSPFPPEPPAEPGPAAAPPAPAVPPPSPRGPPLEMKTPVSPPQSECNPVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERFVEIGSGTSKKLAKRNAAAKMLVRIHNVPMEPRDGSEAEGEEDQFNMTCPRLEGLRGRAPGCTWDSLRNSAGEKLGQLRSRGGAPAPGGACALLQELSEEQSFAISYLDIDALSLSGLHQCLVELSTQPTTVCHGAAPSRDGARAQAARNALQYLRIMAGGK
SIO_010081: TARBP2
subclass of: SO_0000673
so part of: TARBP2
location: complement(join(1108217..1108374,1108788..1108977,1109271..1109398,1109501..1109618,1109935..1110007,1110155..1110238,1110778..1110877,1111545..1111714,1112609..1112661))
location: region:1108217-1112661:-1
so has part: feature:1112609-1112661:-1:exon
so has part: feature:1111545-1111714:-1:exon
so has part: feature:1110778-1110877:-1:exon
so has part: feature:1110155-1110238:-1:exon
so has part: feature:1109935-1110007:-1:exon
so has part: feature:1109501-1109618:-1:exon
so has part: feature:1109271-1109398:-1:exon
so has part: feature:1108788-1108977:-1:exon
so has part: feature:1108217-1108374:-1:exon

XP_032569505.1
type: Protein
SIO_000068: ncbiprotein

position:1108217:-1
position: 1108217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1112661:-1
position: 1112661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1112609-1112661:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1111545-1111714:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1110778-1110877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1110155-1110238:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1109935-1110007:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1109501-1109618:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1109271-1109398:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1108788-1108977:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1108217-1108374:-1:exon

TARBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: TARBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RISC-loading complex subunit TARBP2 isoform X2
translation: MVAASPGKTPISLLQEYGTRLGRTPGYDLLKAEGQAHQPNFTFRVTLGDISCTGQGPSKKAAKHKAAEVALRLLRGGGAMLEPPEHSSPFPPEPPAEPGPAAAPPAPAVPPPSPRGPPLEMKTPVSPPQSECNPVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERFVEIGSGTSKKLAKRNAAAKMLVRIHNVPMEPRDGSEAEGEEDQFNMTCPRLEGLRGRAPGCTWDSLRNSAGEKLGQLRSRGGAPAPGGACALLQELSEEQSFAISYLDIDALSLSGLHQCLVELSTQPTTVCHGAAPSRDGARAQAARNALQYLRIMAGGK
SIO_010081: TARBP2
subclass of: SO_0000673
so part of: TARBP2
location: complement(join(1108217..1108374,1108788..1108977,1109271..1109398,1109501..1109618,1109935..1110007,1110155..1110238,1110778..1110877,1111545..1111704))
location: region:1108217-1111704:-1
so has part: feature:1111545-1111704:-1:exon
so has part: feature:1110778-1110877:-1:exon
so has part: feature:1110155-1110238:-1:exon
so has part: feature:1109935-1110007:-1:exon
so has part: feature:1109501-1109618:-1:exon
so has part: feature:1109271-1109398:-1:exon
so has part: feature:1108788-1108977:-1:exon
so has part: feature:1108217-1108374:-1:exon

XP_032569507.1
type: Protein
SIO_000068: ncbiprotein

position:1111704:-1
position: 1111704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1111545-1111704:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1110778-1110877:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1110155-1110238:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1109935-1110007:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1109501-1109618:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1109271-1109398:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1108788-1108977:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1108217-1108374:-1:exon

MAP3K12
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: MAP3K12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1114350..1123625
location: region:1114350-1123625:1
so has part: feature:1114350-1123625:1:exon
subclass of: SO_0000010

116800045
type: Gene
SIO_000068: ncbigene

position:1114350:1
position: 1114350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1123625:1
position: 1123625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1114350-1123625:1:exon

MAP3K12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: MAP3K12
product: mitogen-activated protein kinase kinase kinase 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032713580.1
SIO_010081: MAP3K12
subclass of: SO_0000673
so part of: MAP3K12
location: join(1114350..1114396,1116238..1116586,1116933..1117116,1117911..1118102,1118906..1119064,1119387..1119545,1119831..1119939,1120210..1120319,1120655..1120771,1121004..1121141,1121578..1122025,1122282..1122352,1122668..1122917,1123482..1123625)
location: region:1114350-1123625:1
so has part: feature:1114350-1114396:1:exon
so has part: feature:1116238-1116586:1:exon
so has part: feature:1116933-1117116:1:exon
so has part: feature:1117911-1118102:1:exon
so has part: feature:1118906-1119064:1:exon
so has part: feature:1119387-1119545:1:exon
so has part: feature:1119831-1119939:1:exon
so has part: feature:1120210-1120319:1:exon
so has part: feature:1120655-1120771:1:exon
so has part: feature:1121004-1121141:1:exon
so has part: feature:1121578-1122025:1:exon
so has part: feature:1122282-1122352:1:exon
so has part: feature:1122668-1122917:1:exon
so has part: feature:1123482-1123625:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1114350-1114396:1:exon

position:1114396:1
position: 1114396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1116238-1116586:1:exon

position:1116238:1
position: 1116238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1116586:1
position: 1116586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1116933-1117116:1:exon

position:1116933:1
position: 1116933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1117116:1
position: 1117116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1117911-1118102:1:exon

position:1117911:1
position: 1117911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1118102:1
position: 1118102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1118906-1119064:1:exon

position:1118906:1
position: 1118906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1119064:1
position: 1119064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1119387-1119545:1:exon

position:1119387:1
position: 1119387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1119545:1
position: 1119545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1119831-1119939:1:exon

position:1119831:1
position: 1119831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1119939:1
position: 1119939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1120210-1120319:1:exon

position:1120210:1
position: 1120210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1120319:1
position: 1120319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1120655-1120771:1:exon

position:1120655:1
position: 1120655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1120771:1
position: 1120771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1121004-1121141:1:exon

position:1121004:1
position: 1121004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1121141:1
position: 1121141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1121578-1122025:1:exon

position:1121578:1
position: 1121578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1122025:1
position: 1122025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1122282-1122352:1:exon

position:1122282:1
position: 1122282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1122352:1
position: 1122352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1122668-1122917:1:exon

position:1122668:1
position: 1122668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1122917:1
position: 1122917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1123482-1123625:1:exon

position:1123482:1
position: 1123482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAP3K12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: MAP3K12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase kinase kinase 12
translation: MACLHETRTPSPSLALPSDGTPEQELTPTQCVLRDVLPAPTAPPEAWPRRGGPRPPELGPEAAGPLAADAAHLRCQAGGGFLEGLFGCLKPVWTMIGKAYAAEHKHPPEDPWEVPFEEILDLQWVGSGAQGAVFLGRFHGEEVAVKKVRDLKETDIKHLRKLKHPNIITFKGVCTQAPCYCIIMEFCAQGQLYEVLRAGRKVTPSLLVDWSMGIAGGMNYLHLHKIIHRDLKSPNMLITYDDVVKISDFGTSKELIDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSSCPDGFKVLLRQCWNSKPRNRPSFRQILLHLDIASADVLSTPQETYFKSQAEWREEVKLHFEKIKSEGTCLHRLEEELINRRREELRHALDIREHYERKLERANNLYMELSALMLQLELKEKELLRREQALEKRYPGLFKPRAPRGLLHGNAVETLIKKRNVPQKLSPHGKRPDILKPEVLLPKLDAAMAQVALPGCPKGPPSPGRSRRAKGRHRKAGPRGGCGELGPEAGTPRGLPVPPATAASPDILGGTLEAVGAPPTTVPDAGPEGATGTQGSPPPQPPTPGEPERESGAGRGGKGGAGQHLTPAALLYRAAVTRGQKRGVSSEEEEGEVDSEVELPLRQRWPPGMSKRQSLSTFSSENFSDGDGDEGHTSEPSHSATPDVGSTNTDERPDDRSEDLLSQGSEIPLDAAPPEGPGRRHGGLSPKVSEDSDCDSAELDHSGSGEGPPRPTAPPGL
SIO_010081: MAP3K12
subclass of: SO_0000673
so part of: MAP3K12
location: join(1116259..1116586,1116933..1117116,1117911..1118102,1118906..1119064,1119387..1119545,1119831..1119939,1120210..1120319,1120655..1120771,1121004..1121141,1121578..1122025,1122282..1122352,1122668..1122917,1123482..1123574)
location: region:1116259-1123574:1
so has part: feature:1116259-1116586:1:exon
so has part: feature:1116933-1117116:1:exon
so has part: feature:1117911-1118102:1:exon
so has part: feature:1118906-1119064:1:exon
so has part: feature:1119387-1119545:1:exon
so has part: feature:1119831-1119939:1:exon
so has part: feature:1120210-1120319:1:exon
so has part: feature:1120655-1120771:1:exon
so has part: feature:1121004-1121141:1:exon
so has part: feature:1121578-1122025:1:exon
so has part: feature:1122282-1122352:1:exon
so has part: feature:1122668-1122917:1:exon
so has part: feature:1123482-1123574:1:exon

XP_032569471.1
type: Protein
SIO_000068: ncbiprotein

position:1116259:1
position: 1116259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1123574:1
position: 1123574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1116259-1116586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1116933-1117116:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1117911-1118102:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1118906-1119064:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1119387-1119545:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1119831-1119939:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1120210-1120319:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1120655-1120771:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1121004-1121141:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1121578-1122025:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1122282-1122352:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1122668-1122917:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1123482-1123574:1:exon

PCBP2
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1124446..1140156)
location: region:1124446-1140156:-1
so has part: feature:1124446-1140156:-1:exon
subclass of: SO_0000010

116800053
type: Gene
SIO_000068: ncbigene

position:1124446:-1
position: 1124446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1140156:-1
position: 1140156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1124446-1140156:-1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 7 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032713612.1
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(1124446..1125035,1127977..1128146,1128752..1128804,1130238..1130310,1134005..1134079,1134488..1134616,1135197..1135328,1136652..1136768,1137082..1137114,1137227..1137250,1137710..1137828,1140042..1140156))
location: region:1124446-1140156:-1
so has part: feature:1140042-1140156:-1:exon
so has part: feature:1137710-1137828:-1:exon
so has part: feature:1137227-1137250:-1:exon
so has part: feature:1137082-1137114:-1:exon
so has part: feature:1136652-1136768:-1:exon
so has part: feature:1135197-1135328:-1:exon
so has part: feature:1134488-1134616:-1:exon
so has part: feature:1134005-1134079:-1:exon
so has part: feature:1130238-1130310:-1:exon
so has part: feature:1128752-1128804:-1:exon
so has part: feature:1127977-1128146:-1:exon
so has part: feature:1124446-1125035:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1140042-1140156:-1:exon

position:1140042:-1
position: 1140042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1137710-1137828:-1:exon

position:1137710:-1
position: 1137710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1137828:-1
position: 1137828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1137227-1137250:-1:exon

position:1137227:-1
position: 1137227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1137250:-1
position: 1137250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
SIO_000628: feature:1135197-1135328:-1:exon

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urn:…
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SIO_000628: feature:1134488-1134616:-1:exon

position:1134488:-1
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position:1134616:-1
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urn:…
SIO_000300: 8
SIO_000628: feature:1134005-1134079:-1:exon

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position:1130310:-1
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urn:…
SIO_000300: 10
SIO_000628: feature:1128752-1128804:-1:exon

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position:1128804:-1
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urn:…
SIO_000300: 11
SIO_000628: feature:1127977-1128146:-1:exon

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position:1128146:-1
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SIO_000628: feature:1124446-1125035:-1:exon

position:1125035:-1
position: 1125035
reference: sequence
type: ReverseStrandPosition
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PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 6 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032713611.1
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(1124446..1125035,1127977..1128146,1128752..1128804,1129739..1129777,1130238..1130310,1134005..1134079,1134488..1134616,1135197..1135328,1136652..1136768,1137082..1137114,1137227..1137250,1137710..1137828,1140042..1140156))
location: region:1124446-1140156:-1
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so has part: feature:1135197-1135328:-1:exon
so has part: feature:1134488-1134616:-1:exon
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 2
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urn:…
SIO_000300: 3
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SIO_000300: 7
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SIO_000628: feature:1134005-1134079:-1:exon

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SIO_000628: feature:1130238-1130310:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1129739-1129777:-1:exon

position:1129739:-1
position: 1129739
reference: sequence
type: ReverseStrandPosition
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position:1129777:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 11
SIO_000628: feature:1128752-1128804:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1127977-1128146:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1124446-1125035:-1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 10 long SRA reads, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032713610.1
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(1124446..1125035,1127977..1128146,1128752..1128804,1130238..1130310,1131301..1131342,1134005..1134079,1134488..1134616,1135197..1135328,1136652..1136768,1137082..1137114,1137227..1137250,1137710..1137828,1140042..1140156))
location: region:1124446-1140156:-1
so has part: feature:1140042-1140156:-1:exon
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so has part: feature:1136652-1136768:-1:exon
so has part: feature:1135197-1135328:-1:exon
so has part: feature:1134488-1134616:-1:exon
so has part: feature:1134005-1134079:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:1140042-1140156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1137710-1137828:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1137227-1137250:-1:exon

urn:…
SIO_000300: 4
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SIO_000300: 5
SIO_000628: feature:1136652-1136768:-1:exon

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SIO_000300: 6
SIO_000628: feature:1135197-1135328:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1134488-1134616:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1134005-1134079:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1131301-1131342:-1:exon

position:1131301:-1
position: 1131301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1131342:-1
position: 1131342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1130238-1130310:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1128752-1128804:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1127977-1128146:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1124446-1125035:-1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 6 long SRA reads, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032713609.1
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(1124446..1125035,1127977..1128146,1128752..1128804,1129739..1129777,1130238..1130310,1131301..1131342,1134005..1134079,1134488..1134616,1135197..1135328,1136652..1136768,1137082..1137114,1137227..1137250,1137710..1137828,1140042..1140156))
location: region:1124446-1140156:-1
so has part: feature:1140042-1140156:-1:exon
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so has part: feature:1135197-1135328:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:1140042-1140156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1137710-1137828:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1137227-1137250:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1137082-1137114:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1136652-1136768:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1135197-1135328:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1134488-1134616:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1134005-1134079:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1131301-1131342:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1130238-1130310:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1129739-1129777:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1128752-1128804:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1127977-1128146:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1124446-1125035:-1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 7 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032713608.1
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(1124446..1125035,1127977..1128146,1128752..1128804,1130238..1130310,1132447..1132533,1134005..1134079,1134488..1134616,1135197..1135328,1136652..1136768,1137082..1137114,1137227..1137250,1137710..1137828,1140042..1140156))
location: region:1124446-1140156:-1
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so has part: feature:1130238-1130310:-1:exon
so has part: feature:1128752-1128804:-1:exon
so has part: feature:1127977-1128146:-1:exon
so has part: feature:1124446-1125035:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1140042-1140156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1137710-1137828:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1137227-1137250:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1137082-1137114:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1136652-1136768:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1135197-1135328:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1134488-1134616:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1134005-1134079:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1132447-1132533:-1:exon

position:1132447:-1
position: 1132447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1132533:-1
position: 1132533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1130238-1130310:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1128752-1128804:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1127977-1128146:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1124446-1125035:-1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 6 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032713607.1
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(1124446..1125035,1127977..1128146,1128752..1128804,1129739..1129777,1130238..1130310,1132447..1132533,1134005..1134079,1134488..1134616,1135197..1135328,1136652..1136768,1137082..1137114,1137227..1137250,1137710..1137828,1140042..1140156))
location: region:1124446-1140156:-1
so has part: feature:1140042-1140156:-1:exon
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so has part: feature:1137227-1137250:-1:exon
so has part: feature:1137082-1137114:-1:exon
so has part: feature:1136652-1136768:-1:exon
so has part: feature:1135197-1135328:-1:exon
so has part: feature:1134488-1134616:-1:exon
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so has part: feature:1128752-1128804:-1:exon
so has part: feature:1127977-1128146:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:1140042-1140156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1137710-1137828:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1137227-1137250:-1:exon

urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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SIO_000300: 6
SIO_000628: feature:1135197-1135328:-1:exon

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SIO_000300: 7
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urn:…
SIO_000300: 8
SIO_000628: feature:1134005-1134079:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1132447-1132533:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1130238-1130310:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1129739-1129777:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1128752-1128804:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1127977-1128146:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1124446-1125035:-1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 21 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032713606.1
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(1124446..1125035,1127977..1128146,1128752..1128804,1130238..1130310,1131301..1131342,1132447..1132533,1134005..1134079,1134488..1134616,1135197..1135328,1136652..1136768,1137082..1137114,1137227..1137250,1137710..1137828,1140042..1140156))
location: region:1124446-1140156:-1
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urn:…
SIO_000300: 1
SIO_000628: feature:1140042-1140156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1137710-1137828:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1137227-1137250:-1:exon

urn:…
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SIO_000628: feature:1137082-1137114:-1:exon

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SIO_000300: 5
SIO_000628: feature:1136652-1136768:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1135197-1135328:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1134488-1134616:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1134005-1134079:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1132447-1132533:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1131301-1131342:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1130238-1130310:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1128752-1128804:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1127977-1128146:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1124446-1125035:-1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 6 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032713604.1
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(1124446..1125035,1127977..1128146,1128752..1128804,1129739..1129777,1130238..1130310,1131301..1131342,1132447..1132533,1134005..1134079,1134488..1134616,1135197..1135328,1136652..1136768,1137082..1137114,1137227..1137250,1137710..1137828,1140042..1140156))
location: region:1124446-1140156:-1
so has part: feature:1140042-1140156:-1:exon
so has part: feature:1137710-1137828:-1:exon
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so has part: feature:1137082-1137114:-1:exon
so has part: feature:1136652-1136768:-1:exon
so has part: feature:1135197-1135328:-1:exon
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so has part: feature:1134005-1134079:-1:exon
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so has part: feature:1130238-1130310:-1:exon
so has part: feature:1129739-1129777:-1:exon
so has part: feature:1128752-1128804:-1:exon
so has part: feature:1127977-1128146:-1:exon
so has part: feature:1124446-1125035:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1140042-1140156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1137710-1137828:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1137227-1137250:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1137082-1137114:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1136652-1136768:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1135197-1135328:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1134488-1134616:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1134005-1134079:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1132447-1132533:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1131301-1131342:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1130238-1130310:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1129739-1129777:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1128752-1128804:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1127977-1128146:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1124446-1125035:-1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 8 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032713603.1
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(1124446..1125035,1127977..1128146,1128752..1128804,1130238..1130310,1131301..1131342,1132207..1132272,1132447..1132533,1134005..1134079,1134488..1134616,1135197..1135328,1136652..1136768,1137082..1137114,1137227..1137250,1137710..1137828,1140042..1140156))
location: region:1124446-1140156:-1
so has part: feature:1140042-1140156:-1:exon
so has part: feature:1137710-1137828:-1:exon
so has part: feature:1137227-1137250:-1:exon
so has part: feature:1137082-1137114:-1:exon
so has part: feature:1136652-1136768:-1:exon
so has part: feature:1135197-1135328:-1:exon
so has part: feature:1134488-1134616:-1:exon
so has part: feature:1134005-1134079:-1:exon
so has part: feature:1132447-1132533:-1:exon
so has part: feature:1132207-1132272:-1:exon
so has part: feature:1131301-1131342:-1:exon
so has part: feature:1130238-1130310:-1:exon
so has part: feature:1128752-1128804:-1:exon
so has part: feature:1127977-1128146:-1:exon
so has part: feature:1124446-1125035:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1140042-1140156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1137710-1137828:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1137227-1137250:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1137082-1137114:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1136652-1136768:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1135197-1135328:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1134488-1134616:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1134005-1134079:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1132447-1132533:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1132207-1132272:-1:exon

position:1132207:-1
position: 1132207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1132272:-1
position: 1132272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1131301-1131342:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1130238-1130310:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1128752-1128804:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1127977-1128146:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1124446-1125035:-1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 6 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032713602.1
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(1124446..1125035,1127977..1128146,1128752..1128804,1129739..1129777,1130238..1130310,1131301..1131342,1132207..1132272,1132447..1132533,1134005..1134079,1134488..1134616,1135197..1135328,1136652..1136768,1137082..1137114,1137227..1137250,1137710..1137828,1140042..1140156))
location: region:1124446-1140156:-1
so has part: feature:1140042-1140156:-1:exon
so has part: feature:1137710-1137828:-1:exon
so has part: feature:1137227-1137250:-1:exon
so has part: feature:1137082-1137114:-1:exon
so has part: feature:1136652-1136768:-1:exon
so has part: feature:1135197-1135328:-1:exon
so has part: feature:1134488-1134616:-1:exon
so has part: feature:1134005-1134079:-1:exon
so has part: feature:1132447-1132533:-1:exon
so has part: feature:1132207-1132272:-1:exon
so has part: feature:1131301-1131342:-1:exon
so has part: feature:1130238-1130310:-1:exon
so has part: feature:1129739-1129777:-1:exon
so has part: feature:1128752-1128804:-1:exon
so has part: feature:1127977-1128146:-1:exon
so has part: feature:1124446-1125035:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1140042-1140156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1137710-1137828:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1137227-1137250:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1137082-1137114:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1136652-1136768:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1135197-1135328:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1134488-1134616:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1134005-1134079:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1132447-1132533:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1132207-1132272:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1131301-1131342:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1130238-1130310:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1129739-1129777:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1128752-1128804:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1127977-1128146:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1124446-1125035:-1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X10
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQLTKLHQLAMQQSHFPMSHGNTGFSGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(1124999..1125035,1127977..1128146,1128752..1128804,1130238..1130310,1134005..1134079,1134488..1134616,1135197..1135328,1136652..1136768,1137082..1137114,1137227..1137250,1137710..1137778))
location: region:1124999-1137778:-1
so has part: feature:1137710-1137778:-1:exon
so has part: feature:1137227-1137250:-1:exon
so has part: feature:1137082-1137114:-1:exon
so has part: feature:1136652-1136768:-1:exon
so has part: feature:1135197-1135328:-1:exon
so has part: feature:1134488-1134616:-1:exon
so has part: feature:1134005-1134079:-1:exon
so has part: feature:1130238-1130310:-1:exon
so has part: feature:1128752-1128804:-1:exon
so has part: feature:1127977-1128146:-1:exon
so has part: feature:1124999-1125035:-1:exon

XP_032569503.1
type: Protein
SIO_000068: ncbiprotein

position:1124999:-1
position: 1124999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1137778:-1
position: 1137778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1137710-1137778:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1137227-1137250:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1137082-1137114:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1136652-1136768:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1135197-1135328:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1134488-1134616:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1134005-1134079:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1130238-1130310:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1128752-1128804:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1127977-1128146:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1124999-1125035:-1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X9
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQLTKLHQLAMQQSHFPMSHGNTGFSGIDSSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(1124999..1125035,1127977..1128146,1128752..1128804,1129739..1129777,1130238..1130310,1134005..1134079,1134488..1134616,1135197..1135328,1136652..1136768,1137082..1137114,1137227..1137250,1137710..1137778))
location: region:1124999-1137778:-1
so has part: feature:1137710-1137778:-1:exon
so has part: feature:1137227-1137250:-1:exon
so has part: feature:1137082-1137114:-1:exon
so has part: feature:1136652-1136768:-1:exon
so has part: feature:1135197-1135328:-1:exon
so has part: feature:1134488-1134616:-1:exon
so has part: feature:1134005-1134079:-1:exon
so has part: feature:1130238-1130310:-1:exon
so has part: feature:1129739-1129777:-1:exon
so has part: feature:1128752-1128804:-1:exon
so has part: feature:1127977-1128146:-1:exon
so has part: feature:1124999-1125035:-1:exon

XP_032569502.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1137710-1137778:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1137227-1137250:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1137082-1137114:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1136652-1136768:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1135197-1135328:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1134488-1134616:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1134005-1134079:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1130238-1130310:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1129739-1129777:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1128752-1128804:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1127977-1128146:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1124999-1125035:-1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X8
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(1124999..1125035,1127977..1128146,1128752..1128804,1130238..1130310,1131301..1131342,1134005..1134079,1134488..1134616,1135197..1135328,1136652..1136768,1137082..1137114,1137227..1137250,1137710..1137778))
location: region:1124999-1137778:-1
so has part: feature:1137710-1137778:-1:exon
so has part: feature:1137227-1137250:-1:exon
so has part: feature:1137082-1137114:-1:exon
so has part: feature:1136652-1136768:-1:exon
so has part: feature:1135197-1135328:-1:exon
so has part: feature:1134488-1134616:-1:exon
so has part: feature:1134005-1134079:-1:exon
so has part: feature:1131301-1131342:-1:exon
so has part: feature:1130238-1130310:-1:exon
so has part: feature:1128752-1128804:-1:exon
so has part: feature:1127977-1128146:-1:exon
so has part: feature:1124999-1125035:-1:exon

XP_032569501.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1137710-1137778:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1137227-1137250:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1137082-1137114:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1136652-1136768:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1135197-1135328:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1134488-1134616:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1134005-1134079:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1131301-1131342:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1130238-1130310:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1128752-1128804:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1127977-1128146:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1124999-1125035:-1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X7
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGIDSSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(1124999..1125035,1127977..1128146,1128752..1128804,1129739..1129777,1130238..1130310,1131301..1131342,1134005..1134079,1134488..1134616,1135197..1135328,1136652..1136768,1137082..1137114,1137227..1137250,1137710..1137778))
location: region:1124999-1137778:-1
so has part: feature:1137710-1137778:-1:exon
so has part: feature:1137227-1137250:-1:exon
so has part: feature:1137082-1137114:-1:exon
so has part: feature:1136652-1136768:-1:exon
so has part: feature:1135197-1135328:-1:exon
so has part: feature:1134488-1134616:-1:exon
so has part: feature:1134005-1134079:-1:exon
so has part: feature:1131301-1131342:-1:exon
so has part: feature:1130238-1130310:-1:exon
so has part: feature:1129739-1129777:-1:exon
so has part: feature:1128752-1128804:-1:exon
so has part: feature:1127977-1128146:-1:exon
so has part: feature:1124999-1125035:-1:exon

XP_032569500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1137710-1137778:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1137227-1137250:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1137082-1137114:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1136652-1136768:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1135197-1135328:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1134488-1134616:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1134005-1134079:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1131301-1131342:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1130238-1130310:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1129739-1129777:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1128752-1128804:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1127977-1128146:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1124999-1125035:-1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X6
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQELTKLHQLAMQQSHFPMSHGNTGFSGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(1124999..1125035,1127977..1128146,1128752..1128804,1130238..1130310,1132447..1132533,1134005..1134079,1134488..1134616,1135197..1135328,1136652..1136768,1137082..1137114,1137227..1137250,1137710..1137778))
location: region:1124999-1137778:-1
so has part: feature:1137710-1137778:-1:exon
so has part: feature:1137227-1137250:-1:exon
so has part: feature:1137082-1137114:-1:exon
so has part: feature:1136652-1136768:-1:exon
so has part: feature:1135197-1135328:-1:exon
so has part: feature:1134488-1134616:-1:exon
so has part: feature:1134005-1134079:-1:exon
so has part: feature:1132447-1132533:-1:exon
so has part: feature:1130238-1130310:-1:exon
so has part: feature:1128752-1128804:-1:exon
so has part: feature:1127977-1128146:-1:exon
so has part: feature:1124999-1125035:-1:exon

XP_032569499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1137710-1137778:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1137227-1137250:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1137082-1137114:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1136652-1136768:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1135197-1135328:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1134488-1134616:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1134005-1134079:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1132447-1132533:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1130238-1130310:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1128752-1128804:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1127977-1128146:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1124999-1125035:-1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X5
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQELTKLHQLAMQQSHFPMSHGNTGFSGIDSSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(1124999..1125035,1127977..1128146,1128752..1128804,1129739..1129777,1130238..1130310,1132447..1132533,1134005..1134079,1134488..1134616,1135197..1135328,1136652..1136768,1137082..1137114,1137227..1137250,1137710..1137778))
location: region:1124999-1137778:-1
so has part: feature:1137710-1137778:-1:exon
so has part: feature:1137227-1137250:-1:exon
so has part: feature:1137082-1137114:-1:exon
so has part: feature:1136652-1136768:-1:exon
so has part: feature:1135197-1135328:-1:exon
so has part: feature:1134488-1134616:-1:exon
so has part: feature:1134005-1134079:-1:exon
so has part: feature:1132447-1132533:-1:exon
so has part: feature:1130238-1130310:-1:exon
so has part: feature:1129739-1129777:-1:exon
so has part: feature:1128752-1128804:-1:exon
so has part: feature:1127977-1128146:-1:exon
so has part: feature:1124999-1125035:-1:exon

XP_032569498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1137710-1137778:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1137227-1137250:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1137082-1137114:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1136652-1136768:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1135197-1135328:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1134488-1134616:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1134005-1134079:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1132447-1132533:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1130238-1130310:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1129739-1129777:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1128752-1128804:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1127977-1128146:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1124999-1125035:-1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X4
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(1124999..1125035,1127977..1128146,1128752..1128804,1130238..1130310,1131301..1131342,1132447..1132533,1134005..1134079,1134488..1134616,1135197..1135328,1136652..1136768,1137082..1137114,1137227..1137250,1137710..1137778))
location: region:1124999-1137778:-1
so has part: feature:1137710-1137778:-1:exon
so has part: feature:1137227-1137250:-1:exon
so has part: feature:1137082-1137114:-1:exon
so has part: feature:1136652-1136768:-1:exon
so has part: feature:1135197-1135328:-1:exon
so has part: feature:1134488-1134616:-1:exon
so has part: feature:1134005-1134079:-1:exon
so has part: feature:1132447-1132533:-1:exon
so has part: feature:1131301-1131342:-1:exon
so has part: feature:1130238-1130310:-1:exon
so has part: feature:1128752-1128804:-1:exon
so has part: feature:1127977-1128146:-1:exon
so has part: feature:1124999-1125035:-1:exon

XP_032569497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1137710-1137778:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1137227-1137250:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1137082-1137114:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1136652-1136768:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1135197-1135328:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1134488-1134616:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1134005-1134079:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1132447-1132533:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1131301-1131342:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1130238-1130310:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1128752-1128804:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1127977-1128146:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1124999-1125035:-1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X3
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGIDSSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(1124999..1125035,1127977..1128146,1128752..1128804,1129739..1129777,1130238..1130310,1131301..1131342,1132447..1132533,1134005..1134079,1134488..1134616,1135197..1135328,1136652..1136768,1137082..1137114,1137227..1137250,1137710..1137778))
location: region:1124999-1137778:-1
so has part: feature:1137710-1137778:-1:exon
so has part: feature:1137227-1137250:-1:exon
so has part: feature:1137082-1137114:-1:exon
so has part: feature:1136652-1136768:-1:exon
so has part: feature:1135197-1135328:-1:exon
so has part: feature:1134488-1134616:-1:exon
so has part: feature:1134005-1134079:-1:exon
so has part: feature:1132447-1132533:-1:exon
so has part: feature:1131301-1131342:-1:exon
so has part: feature:1130238-1130310:-1:exon
so has part: feature:1129739-1129777:-1:exon
so has part: feature:1128752-1128804:-1:exon
so has part: feature:1127977-1128146:-1:exon
so has part: feature:1124999-1125035:-1:exon

XP_032569495.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1137710-1137778:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1137227-1137250:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1137082-1137114:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1136652-1136768:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1135197-1135328:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1134488-1134616:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1134005-1134079:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1132447-1132533:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1131301-1131342:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1130238-1130310:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1129739-1129777:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1128752-1128804:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1127977-1128146:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1124999-1125035:-1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X2
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEATRQPLHGNELGPIPAWAAVLPAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(1124999..1125035,1127977..1128146,1128752..1128804,1130238..1130310,1131301..1131342,1132207..1132272,1132447..1132533,1134005..1134079,1134488..1134616,1135197..1135328,1136652..1136768,1137082..1137114,1137227..1137250,1137710..1137778))
location: region:1124999-1137778:-1
so has part: feature:1137710-1137778:-1:exon
so has part: feature:1137227-1137250:-1:exon
so has part: feature:1137082-1137114:-1:exon
so has part: feature:1136652-1136768:-1:exon
so has part: feature:1135197-1135328:-1:exon
so has part: feature:1134488-1134616:-1:exon
so has part: feature:1134005-1134079:-1:exon
so has part: feature:1132447-1132533:-1:exon
so has part: feature:1132207-1132272:-1:exon
so has part: feature:1131301-1131342:-1:exon
so has part: feature:1130238-1130310:-1:exon
so has part: feature:1128752-1128804:-1:exon
so has part: feature:1127977-1128146:-1:exon
so has part: feature:1124999-1125035:-1:exon

XP_032569494.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1137710-1137778:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1137227-1137250:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1137082-1137114:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1136652-1136768:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1135197-1135328:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1134488-1134616:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1134005-1134079:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1132447-1132533:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1132207-1132272:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1131301-1131342:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1130238-1130310:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1128752-1128804:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1127977-1128146:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1124999-1125035:-1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X1
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEATRQPLHGNELGPIPAWAAVLPAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGIDSSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(1124999..1125035,1127977..1128146,1128752..1128804,1129739..1129777,1130238..1130310,1131301..1131342,1132207..1132272,1132447..1132533,1134005..1134079,1134488..1134616,1135197..1135328,1136652..1136768,1137082..1137114,1137227..1137250,1137710..1137778))
location: region:1124999-1137778:-1
so has part: feature:1137710-1137778:-1:exon
so has part: feature:1137227-1137250:-1:exon
so has part: feature:1137082-1137114:-1:exon
so has part: feature:1136652-1136768:-1:exon
so has part: feature:1135197-1135328:-1:exon
so has part: feature:1134488-1134616:-1:exon
so has part: feature:1134005-1134079:-1:exon
so has part: feature:1132447-1132533:-1:exon
so has part: feature:1132207-1132272:-1:exon
so has part: feature:1131301-1131342:-1:exon
so has part: feature:1130238-1130310:-1:exon
so has part: feature:1129739-1129777:-1:exon
so has part: feature:1128752-1128804:-1:exon
so has part: feature:1127977-1128146:-1:exon
so has part: feature:1124999-1125035:-1:exon

XP_032569493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1137710-1137778:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1137227-1137250:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1137082-1137114:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1136652-1136768:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1135197-1135328:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1134488-1134616:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1134005-1134079:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1132447-1132533:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1132207-1132272:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1131301-1131342:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1130238-1130310:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1129739-1129777:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1128752-1128804:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1127977-1128146:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1124999-1125035:-1:exon

AMHR2
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: AMHR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1141653..1147200)
location: region:1141653-1147200:-1
so has part: feature:1141653-1147200:-1:exon
subclass of: SO_0000010

116799923
type: Gene
SIO_000068: ncbigene

position:1141653:-1
position: 1141653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1147200:-1
position: 1147200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1141653-1147200:-1:exon

AMHR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: AMHR2
product: anti-Mullerian hormone receptor type 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032713384.1
SIO_010081: AMHR2
subclass of: SO_0000673
so part of: AMHR2
location: complement(join(1141653..1141796,1142808..1142966,1143545..1143681,1143757..1143904,1144499..1144659,1144759..1144873,1145233..1145457,1146010..1146122,1146520..1146609,1146996..1147200))
location: region:1141653-1147200:-1
so has part: feature:1146996-1147200:-1:exon
so has part: feature:1146520-1146609:-1:exon
so has part: feature:1146010-1146122:-1:exon
so has part: feature:1145233-1145457:-1:exon
so has part: feature:1144759-1144873:-1:exon
so has part: feature:1144499-1144659:-1:exon
so has part: feature:1143757-1143904:-1:exon
so has part: feature:1143545-1143681:-1:exon
so has part: feature:1142808-1142966:-1:exon
so has part: feature:1141653-1141796:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1146996-1147200:-1:exon

position:1146996:-1
position: 1146996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1146520-1146609:-1:exon

position:1146520:-1
position: 1146520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1146609:-1
position: 1146609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1146010-1146122:-1:exon

position:1146010:-1
position: 1146010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1146122:-1
position: 1146122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1145233-1145457:-1:exon

position:1145233:-1
position: 1145233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1145457:-1
position: 1145457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1144759-1144873:-1:exon

position:1144759:-1
position: 1144759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1144873:-1
position: 1144873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1144499-1144659:-1:exon

position:1144499:-1
position: 1144499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1144659:-1
position: 1144659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1143757-1143904:-1:exon

position:1143757:-1
position: 1143757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1143904:-1
position: 1143904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1143545-1143681:-1:exon

position:1143545:-1
position: 1143545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1143681:-1
position: 1143681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1142808-1142966:-1:exon

position:1142808:-1
position: 1142808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1142966:-1
position: 1142966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1141653-1141796:-1:exon

position:1141796:-1
position: 1141796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AMHR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: AMHR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anti-Muellerian hormone type-2 receptor
translation: MTLFPGCWGGGGAACPSPTCTPSPAGPPGGAVLVCLCHGHLCNGNTTATGTGTGTGTTLGLGGPHQGPVPGQGGSTGTLWLWGAGPLLLILLTCLGILGLRRSRAHTGQPPREGRRIGVPPEPPQSPDLPALHFLQVLQSGRFSAVWRGTLRQRPVAIKAFAAGAGGRFAAERAVHALPLMEHENVARLLGTRGAGPRARGGLLVLQLYPAGSLRQFLGQHVGTWAGSVRLALSLARGLAFLHQELWRDGLYKPSVVHRDLSSQNVLVREDGTCAIGDFGLALALPPRAQDGTGARHVVAIRKAGTQRYLAPEILDESLDLRAWGRALRQADIYALALLLWEILSRCQALSPGAPVPAFQLAYEAELGSSPTGAQLRRLAADERRRPLIPPAWHQAPQPGGALPELLEDCWDPDPEARLSAERALQRLQRLAAGPAPPPGDSGPRPPPFRQVPESPTMWNPGAGMGGTPQNGGAALTPTPAPSPGQ
SIO_010081: AMHR2
subclass of: SO_0000673
so part of: AMHR2
location: complement(join(1141689..1141796,1142808..1142966,1143545..1143681,1143757..1143904,1144499..1144659,1144759..1144873,1145233..1145457,1146010..1146122,1146520..1146609,1146996..1147200))
location: region:1141689-1147200:-1
so has part: feature:1146996-1147200:-1:exon
so has part: feature:1146520-1146609:-1:exon
so has part: feature:1146010-1146122:-1:exon
so has part: feature:1145233-1145457:-1:exon
so has part: feature:1144759-1144873:-1:exon
so has part: feature:1144499-1144659:-1:exon
so has part: feature:1143757-1143904:-1:exon
so has part: feature:1143545-1143681:-1:exon
so has part: feature:1142808-1142966:-1:exon
so has part: feature:1141689-1141796:-1:exon

XP_032569275.1
type: Protein
SIO_000068: ncbiprotein

position:1141689:-1
position: 1141689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1146996-1147200:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1146520-1146609:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1146010-1146122:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1145233-1145457:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1144759-1144873:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1144499-1144659:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1143757-1143904:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1143545-1143681:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1142808-1142966:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1141689-1141796:-1:exon

SP1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: SP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1152083..1165741)
location: region:1152083-1165741:-1
so has part: feature:1152083-1165741:-1:exon
subclass of: SO_0000010

116800044
type: Gene
SIO_000068: ncbigene

position:1152083:-1
position: 1152083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165741:-1
position: 1165741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1152083-1165741:-1:exon

SP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SP1
product: Sp1 transcription factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 6 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032713578.1
SIO_010081: SP1
subclass of: SO_0000673
so part of: SP1
location: complement(join(1152083..1152730,1154352..1154551,1155302..1155470,1162332..1163835,1164455..1164549,1165649..1165741))
location: region:1152083-1165741:-1
so has part: feature:1165649-1165741:-1:exon
so has part: feature:1164455-1164549:-1:exon
so has part: feature:1162332-1163835:-1:exon
so has part: feature:1155302-1155470:-1:exon
so has part: feature:1154352-1154551:-1:exon
so has part: feature:1152083-1152730:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1165649-1165741:-1:exon

position:1165649:-1
position: 1165649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1164455-1164549:-1:exon

position:1164455:-1
position: 1164455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1164549:-1
position: 1164549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1162332-1163835:-1:exon

position:1162332:-1
position: 1162332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1163835:-1
position: 1163835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1155302-1155470:-1:exon

position:1155302:-1
position: 1155302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1155470:-1
position: 1155470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1154352-1154551:-1:exon

position:1154352:-1
position: 1154352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1154551:-1
position: 1154551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1152083-1152730:-1:exon

position:1152730:-1
position: 1152730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SP1
product: Sp1 transcription factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 7 long SRA reads, 9 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032713579.1
SIO_010081: SP1
subclass of: SO_0000673
so part of: SP1
location: complement(join(1152083..1152730,1154352..1154551,1155302..1155470,1162332..1163835,1164455..1164549,1165279..1165395))
location: region:1152083-1165395:-1
so has part: feature:1165279-1165395:-1:exon
so has part: feature:1164455-1164549:-1:exon
so has part: feature:1162332-1163835:-1:exon
so has part: feature:1155302-1155470:-1:exon
so has part: feature:1154352-1154551:-1:exon
so has part: feature:1152083-1152730:-1:exon

position:1165395:-1
position: 1165395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1165279-1165395:-1:exon

position:1165279:-1
position: 1165279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1164455-1164549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1162332-1163835:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1155302-1155470:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1154352-1154551:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1152083-1152730:-1:exon

SP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SP1
product: Sp1 transcription factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 6 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032713577.1
SIO_010081: SP1
subclass of: SO_0000673
so part of: SP1
location: complement(join(1152083..1152730,1154352..1154551,1155302..1155470,1162332..1163835,1164455..1164549,1164667..1165169))
location: region:1152083-1165169:-1
so has part: feature:1164667-1165169:-1:exon
so has part: feature:1164455-1164549:-1:exon
so has part: feature:1162332-1163835:-1:exon
so has part: feature:1155302-1155470:-1:exon
so has part: feature:1154352-1154551:-1:exon
so has part: feature:1152083-1152730:-1:exon

position:1165169:-1
position: 1165169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1164667-1165169:-1:exon

position:1164667:-1
position: 1164667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1164455-1164549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1162332-1163835:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1155302-1155470:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1154352-1154551:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1152083-1152730:-1:exon

SP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Sp1 isoform X2
translation: MSDQENPEEMSAVKPDKGEGDASSTSSAGGGEAQESQPSPLALLAATCSRIESPNENSNSSQGQQGGSGELDLNAAAAQIAQSANGWQIISAGSSTPTGSKEPGSNGSNGSGDASKSRPVSAGPYVVTSASGLQNQQVLTGLPGVIPNIQYQVIPQFQTIDGQQLQFATTPAQVNVQQDASGQLQIIPGSNQQIITSRAGSSNLIAMPNLLQQAVPIQGVGLANNSLSGQTQYVANVPVALNGNITLLPVNSVAASLAPTSQTGTLSSSGSPDSSSQPATSGATSSSASTASSQASSGAFFTNANSYSTTTTTSNVGVMNFSTSATVGTNSQAQTPQRASSVPSSDSLQSPVSGVALQPGQQKEGDQSQQSQQQQQQQILIQPQLVQGGQTIQALQTTPLSGQTFATQAISQDALQNLQLQAVPNSGPIIIRTPTVGPNGQVSWQTIQLQNLQVQNPQAQTITLAPMQGVSLGQTGSTSTTLTPIASLPSGTVTVNAAQLSSVPGLQTINLSALGASGIQVHQLQGLPLAIANAPGDHGAQLGLHGASGDGLGDESAAVEEGETSPDPQPQQGRKPRREACTCPYCKEGEGRSSGDPGKKKQHICHIPGCGKVYGKTSHLRAHLRWHTGERPFICTWVLCGKRFTRSDELQRHKRTHTGEKKFACPECPKRFMRSDHLSKHIKTHQNKKGGATNVAMNVSAVPMDTAASAEGNGGATPSALIATNMVAMEAICPEGIARLASSGINVMQVADLQSINISGNGF
SIO_010081: SP1
subclass of: SO_0000673
so part of: SP1
location: complement(join(1152414..1152730,1154352..1154551,1155302..1155470,1162332..1163835,1164455..1164549,1165649..1165655))
location: region:1152414-1165655:-1
so has part: feature:1165649-1165655:-1:exon
so has part: feature:1164455-1164549:-1:exon
so has part: feature:1162332-1163835:-1:exon
so has part: feature:1155302-1155470:-1:exon
so has part: feature:1154352-1154551:-1:exon
so has part: feature:1152414-1152730:-1:exon

XP_032569469.1
type: Protein
SIO_000068: ncbiprotein

position:1152414:-1
position: 1152414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165655:-1
position: 1165655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1165649-1165655:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1164455-1164549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1162332-1163835:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1155302-1155470:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1154352-1154551:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1152414-1152730:-1:exon

SP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Sp1 isoform X1
translation: MRRLLSSERGRILGGEGTGRGGGVSQGARMGGGVPAGASRGLDPRCGESRGGSTALGQEGREGKGEARGGPRWKPGSVPGGWGGAGPWSGAGSSPPCPAASSPLAAPSASQTPSHRRSGAHDQENPEEMSAVKPDKGEGDASSTSSAGGGEAQESQPSPLALLAATCSRIESPNENSNSSQGQQGGSGELDLNAAAAQIAQSANGWQIISAGSSTPTGSKEPGSNGSNGSGDASKSRPVSAGPYVVTSASGLQNQQVLTGLPGVIPNIQYQVIPQFQTIDGQQLQFATTPAQVNVQQDASGQLQIIPGSNQQIITSRAGSSNLIAMPNLLQQAVPIQGVGLANNSLSGQTQYVANVPVALNGNITLLPVNSVAASLAPTSQTGTLSSSGSPDSSSQPATSGATSSSASTASSQASSGAFFTNANSYSTTTTTSNVGVMNFSTSATVGTNSQAQTPQRASSVPSSDSLQSPVSGVALQPGQQKEGDQSQQSQQQQQQQILIQPQLVQGGQTIQALQTTPLSGQTFATQAISQDALQNLQLQAVPNSGPIIIRTPTVGPNGQVSWQTIQLQNLQVQNPQAQTITLAPMQGVSLGQTGSTSTTLTPIASLPSGTVTVNAAQLSSVPGLQTINLSALGASGIQVHQLQGLPLAIANAPGDHGAQLGLHGASGDGLGDESAAVEEGETSPDPQPQQGRKPRREACTCPYCKEGEGRSSGDPGKKKQHICHIPGCGKVYGKTSHLRAHLRWHTGERPFICTWVLCGKRFTRSDELQRHKRTHTGEKKFACPECPKRFMRSDHLSKHIKTHQNKKGGATNVAMNVSAVPMDTAASAEGNGGATPSALIATNMVAMEAICPEGIARLASSGINVMQVADLQSINISGNGF
SIO_010081: SP1
subclass of: SO_0000673
so part of: SP1
location: complement(join(1152414..1152730,1154352..1154551,1155302..1155470,1162332..1163835,1164455..1164549,1164667..1165030))
location: region:1152414-1165030:-1
so has part: feature:1164667-1165030:-1:exon
so has part: feature:1164455-1164549:-1:exon
so has part: feature:1162332-1163835:-1:exon
so has part: feature:1155302-1155470:-1:exon
so has part: feature:1154352-1154551:-1:exon
so has part: feature:1152414-1152730:-1:exon

XP_032569468.1
type: Protein
SIO_000068: ncbiprotein

position:1165030:-1
position: 1165030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1164667-1165030:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1164455-1164549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1162332-1163835:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1155302-1155470:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1154352-1154551:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1152414-1152730:-1:exon

SP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Sp1 isoform X3
translation: MSAVKPDKGEGDASSTSSAGGGEAQESQPSPLALLAATCSRIESPNENSNSSQGQQGGSGELDLNAAAAQIAQSANGWQIISAGSSTPTGSKEPGSNGSNGSGDASKSRPVSAGPYVVTSASGLQNQQVLTGLPGVIPNIQYQVIPQFQTIDGQQLQFATTPAQVNVQQDASGQLQIIPGSNQQIITSRAGSSNLIAMPNLLQQAVPIQGVGLANNSLSGQTQYVANVPVALNGNITLLPVNSVAASLAPTSQTGTLSSSGSPDSSSQPATSGATSSSASTASSQASSGAFFTNANSYSTTTTTSNVGVMNFSTSATVGTNSQAQTPQRASSVPSSDSLQSPVSGVALQPGQQKEGDQSQQSQQQQQQQILIQPQLVQGGQTIQALQTTPLSGQTFATQAISQDALQNLQLQAVPNSGPIIIRTPTVGPNGQVSWQTIQLQNLQVQNPQAQTITLAPMQGVSLGQTGSTSTTLTPIASLPSGTVTVNAAQLSSVPGLQTINLSALGASGIQVHQLQGLPLAIANAPGDHGAQLGLHGASGDGLGDESAAVEEGETSPDPQPQQGRKPRREACTCPYCKEGEGRSSGDPGKKKQHICHIPGCGKVYGKTSHLRAHLRWHTGERPFICTWVLCGKRFTRSDELQRHKRTHTGEKKFACPECPKRFMRSDHLSKHIKTHQNKKGGATNVAMNVSAVPMDTAASAEGNGGATPSALIATNMVAMEAICPEGIARLASSGINVMQVADLQSINISGNGF
SIO_010081: SP1
subclass of: SO_0000673
so part of: SP1
location: complement(join(1152414..1152730,1154352..1154551,1155302..1155470,1162332..1163835,1164455..1164529))
location: region:1152414-1164529:-1
so has part: feature:1164455-1164529:-1:exon
so has part: feature:1162332-1163835:-1:exon
so has part: feature:1155302-1155470:-1:exon
so has part: feature:1154352-1154551:-1:exon
so has part: feature:1152414-1152730:-1:exon

XP_032569470.1
type: Protein
SIO_000068: ncbiprotein

position:1164529:-1
position: 1164529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1164455-1164529:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1162332-1163835:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1155302-1155470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1154352-1154551:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1152414-1152730:-1:exon

SP7
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: SP7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1175842..1177083
location: region:1175842-1177083:1
so has part: feature:1175842-1177083:1:exon
subclass of: SO_0000010

116800064
type: Gene
SIO_000068: ncbigene

position:1175842:1
position: 1175842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1177083:1
position: 1177083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1175842-1177083:1:exon

SP7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SP7
product: Sp7 transcription factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 33% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032713630.1
SIO_010081: SP7
subclass of: SO_0000673
so part of: SP7
location: 1175842..1177083
location: region:1175842-1177083:1
so has part: feature:1175842-1177083:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1175842-1177083:1:exon

SP7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SP7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Sp7
translation: MGDSYAAAFPSAPGLLSPSASPQASPGPYGPDYGPFGHPFPAPSGTQEVLGAPVVVTAKGHPPGDCLPGVYPSLEMPHPYGSWYKGGIGGGLPGGSGPAAPSWWDVHPNGGWLGGPAGAEGLQGSLQGQPTLSPPLPTYGSDFGALNPPPYTNPPAAPPAPKPNPGEAPKGPRGGSLGGRPACDCPNCQELERLGGPGGARRKPVHSCHIPGCGKVYGKASHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELERHVRTHTREKKFTCLLCSKRFTRSDHLSKHQKTHADPGPPKPPPGAEQPPPAASPRQPPASPGKDAGSPEAGSLLEI
SIO_010081: SP7
subclass of: SO_0000673
so part of: SP7
location: 1175845..1176840
location: region:1175845-1176840:1
so has part: feature:1175845-1176840:1:exon

XP_032569521.1
type: Protein
SIO_000068: ncbiprotein

position:1175845:1
position: 1175845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1176840:1
position: 1176840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1175845-1176840:1:exon

AAAS
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: AAAS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1179849..1186767
location: region:1179849-1186767:1
so has part: feature:1179849-1186767:1:exon
subclass of: SO_0000010

116800046
type: Gene
SIO_000068: ncbigene

position:1179849:1
position: 1179849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1186767:1
position: 1186767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1179849-1186767:1:exon

AAAS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: AAAS
product: aladin WD repeat nucleoporin, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032713584.1
SIO_010081: AAAS
subclass of: SO_0000673
so part of: AAAS
location: join(1179849..1179944,1180358..1180487,1181212..1181339,1181450..1181505,1181637..1181728,1182008..1182054,1182508..1182606,1183344..1183487,1183621..1183741,1183981..1184105,1184321..1184381,1185020..1185110,1185472..1185565,1185711..1185778,1185888..1185969,1186301..1186385,1186489..1186765)
location: region:1179849-1186765:1
so has part: feature:1179849-1179944:1:exon
so has part: feature:1180358-1180487:1:exon
so has part: feature:1181212-1181339:1:exon
so has part: feature:1181450-1181505:1:exon
so has part: feature:1181637-1181728:1:exon
so has part: feature:1182008-1182054:1:exon
so has part: feature:1182508-1182606:1:exon
so has part: feature:1183344-1183487:1:exon
so has part: feature:1183621-1183741:1:exon
so has part: feature:1183981-1184105:1:exon
so has part: feature:1184321-1184381:1:exon
so has part: feature:1185020-1185110:1:exon
so has part: feature:1185472-1185565:1:exon
so has part: feature:1185711-1185778:1:exon
so has part: feature:1185888-1185969:1:exon
so has part: feature:1186301-1186385:1:exon
so has part: feature:1186489-1186765:1:exon

position:1186765:1
position: 1186765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1179849-1179944:1:exon

position:1179944:1
position: 1179944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1180358-1180487:1:exon

position:1180358:1
position: 1180358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1180487:1
position: 1180487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1181212-1181339:1:exon

position:1181212:1
position: 1181212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1181339:1
position: 1181339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1181450-1181505:1:exon

position:1181450:1
position: 1181450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1181505:1
position: 1181505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1181637-1181728:1:exon

position:1181637:1
position: 1181637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1181728:1
position: 1181728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1182008-1182054:1:exon

position:1182008:1
position: 1182008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1182054:1
position: 1182054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1182508-1182606:1:exon

position:1182508:1
position: 1182508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1182606:1
position: 1182606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1183344-1183487:1:exon

position:1183344:1
position: 1183344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1183487:1
position: 1183487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1183621-1183741:1:exon

position:1183621:1
position: 1183621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1183741:1
position: 1183741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1183981-1184105:1:exon

position:1183981:1
position: 1183981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1184105:1
position: 1184105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1184321-1184381:1:exon

position:1184321:1
position: 1184321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1184381:1
position: 1184381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1185020-1185110:1:exon

position:1185020:1
position: 1185020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1185110:1
position: 1185110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1185472-1185565:1:exon

position:1185472:1
position: 1185472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1185565:1
position: 1185565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1185711-1185778:1:exon

position:1185711:1
position: 1185711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1185778:1
position: 1185778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1185888-1185969:1:exon

position:1185888:1
position: 1185888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1185969:1
position: 1185969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1186301-1186385:1:exon

position:1186301:1
position: 1186301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1186385:1
position: 1186385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1186489-1186765:1:exon

position:1186489:1
position: 1186489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AAAS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: AAAS
product: aladin WD repeat nucleoporin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032713583.1
SIO_010081: AAAS
subclass of: SO_0000673
so part of: AAAS
location: join(1180037..1180076,1180358..1180487,1181212..1181339,1181450..1181505,1181637..1181728,1182008..1182054,1182508..1182606,1183344..1183487,1183621..1183741,1183981..1184105,1184321..1184381,1185020..1185110,1185472..1185565,1185711..1185778,1185888..1185969,1186301..1186385,1186489..1186765)
location: region:1180037-1186765:1
so has part: feature:1180037-1180076:1:exon
so has part: feature:1180358-1180487:1:exon
so has part: feature:1181212-1181339:1:exon
so has part: feature:1181450-1181505:1:exon
so has part: feature:1181637-1181728:1:exon
so has part: feature:1182008-1182054:1:exon
so has part: feature:1182508-1182606:1:exon
so has part: feature:1183344-1183487:1:exon
so has part: feature:1183621-1183741:1:exon
so has part: feature:1183981-1184105:1:exon
so has part: feature:1184321-1184381:1:exon
so has part: feature:1185020-1185110:1:exon
so has part: feature:1185472-1185565:1:exon
so has part: feature:1185711-1185778:1:exon
so has part: feature:1185888-1185969:1:exon
so has part: feature:1186301-1186385:1:exon
so has part: feature:1186489-1186765:1:exon

position:1180037:1
position: 1180037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1180037-1180076:1:exon

position:1180076:1
position: 1180076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1180358-1180487:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1181212-1181339:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1181450-1181505:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1181637-1181728:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1182008-1182054:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1182508-1182606:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1183344-1183487:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1183621-1183741:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1183981-1184105:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1184321-1184381:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1185020-1185110:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1185472-1185565:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1185711-1185778:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1185888-1185969:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1186301-1186385:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1186489-1186765:1:exon

AAAS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: AAAS
product: aladin WD repeat nucleoporin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032713582.1
SIO_010081: AAAS
subclass of: SO_0000673
so part of: AAAS
location: join(1180074..1180164,1180358..1180487,1181212..1181339,1181450..1181505,1181637..1181728,1182008..1182054,1182508..1182606,1183344..1183487,1183621..1183741,1183981..1184105,1184321..1184381,1185020..1185110,1185472..1185565,1185711..1185778,1185888..1185969,1186301..1186385,1186489..1186767)
location: region:1180074-1186767:1
so has part: feature:1180074-1180164:1:exon
so has part: feature:1180358-1180487:1:exon
so has part: feature:1181212-1181339:1:exon
so has part: feature:1181450-1181505:1:exon
so has part: feature:1181637-1181728:1:exon
so has part: feature:1182008-1182054:1:exon
so has part: feature:1182508-1182606:1:exon
so has part: feature:1183344-1183487:1:exon
so has part: feature:1183621-1183741:1:exon
so has part: feature:1183981-1184105:1:exon
so has part: feature:1184321-1184381:1:exon
so has part: feature:1185020-1185110:1:exon
so has part: feature:1185472-1185565:1:exon
so has part: feature:1185711-1185778:1:exon
so has part: feature:1185888-1185969:1:exon
so has part: feature:1186301-1186385:1:exon
so has part: feature:1186489-1186767:1:exon

position:1180074:1
position: 1180074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1180074-1180164:1:exon

position:1180164:1
position: 1180164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1180358-1180487:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1181212-1181339:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1181450-1181505:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1181637-1181728:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1182008-1182054:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1182508-1182606:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1183344-1183487:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1183621-1183741:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1183981-1184105:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1184321-1184381:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1185020-1185110:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1185472-1185565:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1185711-1185778:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1185888-1185969:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1186301-1186385:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1186489-1186767:1:exon

AAAS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: AAAS
product: aladin WD repeat nucleoporin, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032713585.1
SIO_010081: AAAS
subclass of: SO_0000673
so part of: AAAS
location: join(1180083..1180164,1180358..1180487,1181212..1181339,1181450..1181505,1181637..1181728,1182008..1182054,1182508..1182606,1182916..1183095,1183344..1183487,1183621..1183741,1183981..1184105,1184321..1184381,1185020..1185110,1185472..1185565,1185711..1185778,1185888..1185969,1186301..1186385,1186489..1186765)
location: region:1180083-1186765:1
so has part: feature:1180083-1180164:1:exon
so has part: feature:1180358-1180487:1:exon
so has part: feature:1181212-1181339:1:exon
so has part: feature:1181450-1181505:1:exon
so has part: feature:1181637-1181728:1:exon
so has part: feature:1182008-1182054:1:exon
so has part: feature:1182508-1182606:1:exon
so has part: feature:1182916-1183095:1:exon
so has part: feature:1183344-1183487:1:exon
so has part: feature:1183621-1183741:1:exon
so has part: feature:1183981-1184105:1:exon
so has part: feature:1184321-1184381:1:exon
so has part: feature:1185020-1185110:1:exon
so has part: feature:1185472-1185565:1:exon
so has part: feature:1185711-1185778:1:exon
so has part: feature:1185888-1185969:1:exon
so has part: feature:1186301-1186385:1:exon
so has part: feature:1186489-1186765:1:exon

position:1180083:1
position: 1180083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1180083-1180164:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1180358-1180487:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1181212-1181339:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1181450-1181505:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1181637-1181728:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1182008-1182054:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1182508-1182606:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1182916-1183095:1:exon

position:1182916:1
position: 1182916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1183095:1
position: 1183095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1183344-1183487:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1183621-1183741:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1183981-1184105:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1184321-1184381:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1185020-1185110:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1185472-1185565:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1185711-1185778:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1185888-1185969:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1186301-1186385:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1186489-1186765:1:exon

AAAS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: AAAS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aladin isoform X2
translation: MCTLGLFPPPPPPGDVTLYELNNDLVCGRLSEQLPLSFQSQVPDLPVLSLPKEPLKAHGRQEPSARPPFIHHRESPWKRCLSAWRDAGLCGVLREVASAEEEGLRWLRTGSSHALAVCRWLSSLHGSLFPHLSLTSEDMIAAFSQAVDWAGCPVRAFAWHPHTNKFAVALLDDSIRVYNSNRSPCSPRECQSLLRRRLCRLVLRPPPHRPAPAPSPSWDFWPARALSCPRAGLGAAQANCTSATVPSLKHRLQRNVASMAWKPLCASILAVACQTCVLVWHLDPTSLSTRPSSGCAQVLSYPGHSPVTSLAWAPSGERLLSASPVDTTMLVWDVSTENCVQLQWFGGGGVTYLAWSPDGSKVLAATPSAVFRVWEAQMWTCERWPTIRGRCQTGCWSPDGSRLLFTVLGESVIYSLSFSEYRGEMQGQVGGSKTASIVADLSETTFETLYGDERIGGEVHSMVWDPTGERLAVIIRGHPDSPGSQTAIAVFRTRNSPVFELLPCGFVRGERGARPQIIAFHPCFPRGALLTVCWSSGKISHIPFFFVSAHVPLASPRRSPVPVMASVREQPLFSEL
SIO_010081: AAAS
subclass of: SO_0000673
so part of: AAAS
location: join(1180365..1180487,1181212..1181339,1181450..1181505,1181637..1181728,1182008..1182054,1182508..1182606,1182916..1183095,1183344..1183487,1183621..1183741,1183981..1184105,1184321..1184381,1185020..1185110,1185472..1185565,1185711..1185778,1185888..1185969,1186301..1186385,1186489..1186623)
location: region:1180365-1186623:1
so has part: feature:1180365-1180487:1:exon
so has part: feature:1181212-1181339:1:exon
so has part: feature:1181450-1181505:1:exon
so has part: feature:1181637-1181728:1:exon
so has part: feature:1182008-1182054:1:exon
so has part: feature:1182508-1182606:1:exon
so has part: feature:1182916-1183095:1:exon
so has part: feature:1183344-1183487:1:exon
so has part: feature:1183621-1183741:1:exon
so has part: feature:1183981-1184105:1:exon
so has part: feature:1184321-1184381:1:exon
so has part: feature:1185020-1185110:1:exon
so has part: feature:1185472-1185565:1:exon
so has part: feature:1185711-1185778:1:exon
so has part: feature:1185888-1185969:1:exon
so has part: feature:1186301-1186385:1:exon
so has part: feature:1186489-1186623:1:exon

XP_032569476.1
type: Protein
SIO_000068: ncbiprotein

position:1180365:1
position: 1180365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1186623:1
position: 1186623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1180365-1180487:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1181212-1181339:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1181450-1181505:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1181637-1181728:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1182008-1182054:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1182508-1182606:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1182916-1183095:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1183344-1183487:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1183621-1183741:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1183981-1184105:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1184321-1184381:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1185020-1185110:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1185472-1185565:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1185711-1185778:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1185888-1185969:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1186301-1186385:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1186489-1186623:1:exon

AAAS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: AAAS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aladin isoform X1
translation: MCTLGLFPPPPPPGDVTLYELNNDLVCGRLSEQLPLSFQSQVPDLPVLSLPKEPLKAHGRQEPSARPPFIHHRESPWKRCLSAWRDAGLCGVLREVASAEEEGLRWLRTGSSHALAVCRWLSSLHGSLFPHLSLTSEDMIAAFSQAVDWAGCPVRAFAWHPHTNKFAVALLDDSIRVYNSNSATVPSLKHRLQRNVASMAWKPLCASILAVACQTCVLVWHLDPTSLSTRPSSGCAQVLSYPGHSPVTSLAWAPSGERLLSASPVDTTMLVWDVSTENCVQLQWFGGGGVTYLAWSPDGSKVLAATPSAVFRVWEAQMWTCERWPTIRGRCQTGCWSPDGSRLLFTVLGESVIYSLSFSEYRGEMQGQVGGSKTASIVADLSETTFETLYGDERIGGEVHSMVWDPTGERLAVIIRGHPDSPGSQTAIAVFRTRNSPVFELLPCGFVRGERGARPQIIAFHPCFPRGALLTVCWSSGKISHIPFFFVSAHVPLASPRRSPVPVMASVREQPLFSEL
SIO_010081: AAAS
subclass of: SO_0000673
so part of: AAAS
location: join(1180365..1180487,1181212..1181339,1181450..1181505,1181637..1181728,1182008..1182054,1182508..1182606,1183344..1183487,1183621..1183741,1183981..1184105,1184321..1184381,1185020..1185110,1185472..1185565,1185711..1185778,1185888..1185969,1186301..1186385,1186489..1186623)
location: region:1180365-1186623:1
so has part: feature:1180365-1180487:1:exon
so has part: feature:1181212-1181339:1:exon
so has part: feature:1181450-1181505:1:exon
so has part: feature:1181637-1181728:1:exon
so has part: feature:1182008-1182054:1:exon
so has part: feature:1182508-1182606:1:exon
so has part: feature:1183344-1183487:1:exon
so has part: feature:1183621-1183741:1:exon
so has part: feature:1183981-1184105:1:exon
so has part: feature:1184321-1184381:1:exon
so has part: feature:1185020-1185110:1:exon
so has part: feature:1185472-1185565:1:exon
so has part: feature:1185711-1185778:1:exon
so has part: feature:1185888-1185969:1:exon
so has part: feature:1186301-1186385:1:exon
so has part: feature:1186489-1186623:1:exon

XP_032569473.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1180365-1180487:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1181212-1181339:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1181450-1181505:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1181637-1181728:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1182008-1182054:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1182508-1182606:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1183344-1183487:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1183621-1183741:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1183981-1184105:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1184321-1184381:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1185020-1185110:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1185472-1185565:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1185711-1185778:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1185888-1185969:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1186301-1186385:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1186489-1186623:1:exon

AAAS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: AAAS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aladin isoform X1
translation: MCTLGLFPPPPPPGDVTLYELNNDLVCGRLSEQLPLSFQSQVPDLPVLSLPKEPLKAHGRQEPSARPPFIHHRESPWKRCLSAWRDAGLCGVLREVASAEEEGLRWLRTGSSHALAVCRWLSSLHGSLFPHLSLTSEDMIAAFSQAVDWAGCPVRAFAWHPHTNKFAVALLDDSIRVYNSNSATVPSLKHRLQRNVASMAWKPLCASILAVACQTCVLVWHLDPTSLSTRPSSGCAQVLSYPGHSPVTSLAWAPSGERLLSASPVDTTMLVWDVSTENCVQLQWFGGGGVTYLAWSPDGSKVLAATPSAVFRVWEAQMWTCERWPTIRGRCQTGCWSPDGSRLLFTVLGESVIYSLSFSEYRGEMQGQVGGSKTASIVADLSETTFETLYGDERIGGEVHSMVWDPTGERLAVIIRGHPDSPGSQTAIAVFRTRNSPVFELLPCGFVRGERGARPQIIAFHPCFPRGALLTVCWSSGKISHIPFFFVSAHVPLASPRRSPVPVMASVREQPLFSEL
SIO_010081: AAAS
subclass of: SO_0000673
so part of: AAAS
location: join(1180365..1180487,1181212..1181339,1181450..1181505,1181637..1181728,1182008..1182054,1182508..1182606,1183344..1183487,1183621..1183741,1183981..1184105,1184321..1184381,1185020..1185110,1185472..1185565,1185711..1185778,1185888..1185969,1186301..1186385,1186489..1186623)
location: region:1180365-1186623:1
so has part: feature:1180365-1180487:1:exon
so has part: feature:1181212-1181339:1:exon
so has part: feature:1181450-1181505:1:exon
so has part: feature:1181637-1181728:1:exon
so has part: feature:1182008-1182054:1:exon
so has part: feature:1182508-1182606:1:exon
so has part: feature:1183344-1183487:1:exon
so has part: feature:1183621-1183741:1:exon
so has part: feature:1183981-1184105:1:exon
so has part: feature:1184321-1184381:1:exon
so has part: feature:1185020-1185110:1:exon
so has part: feature:1185472-1185565:1:exon
so has part: feature:1185711-1185778:1:exon
so has part: feature:1185888-1185969:1:exon
so has part: feature:1186301-1186385:1:exon
so has part: feature:1186489-1186623:1:exon

XP_032569474.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1180365-1180487:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1181212-1181339:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1181450-1181505:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1181637-1181728:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1182008-1182054:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1182508-1182606:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1183344-1183487:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1183621-1183741:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1183981-1184105:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1184321-1184381:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1185020-1185110:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1185472-1185565:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1185711-1185778:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1185888-1185969:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1186301-1186385:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1186489-1186623:1:exon

AAAS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: AAAS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aladin isoform X1
translation: MCTLGLFPPPPPPGDVTLYELNNDLVCGRLSEQLPLSFQSQVPDLPVLSLPKEPLKAHGRQEPSARPPFIHHRESPWKRCLSAWRDAGLCGVLREVASAEEEGLRWLRTGSSHALAVCRWLSSLHGSLFPHLSLTSEDMIAAFSQAVDWAGCPVRAFAWHPHTNKFAVALLDDSIRVYNSNSATVPSLKHRLQRNVASMAWKPLCASILAVACQTCVLVWHLDPTSLSTRPSSGCAQVLSYPGHSPVTSLAWAPSGERLLSASPVDTTMLVWDVSTENCVQLQWFGGGGVTYLAWSPDGSKVLAATPSAVFRVWEAQMWTCERWPTIRGRCQTGCWSPDGSRLLFTVLGESVIYSLSFSEYRGEMQGQVGGSKTASIVADLSETTFETLYGDERIGGEVHSMVWDPTGERLAVIIRGHPDSPGSQTAIAVFRTRNSPVFELLPCGFVRGERGARPQIIAFHPCFPRGALLTVCWSSGKISHIPFFFVSAHVPLASPRRSPVPVMASVREQPLFSEL
SIO_010081: AAAS
subclass of: SO_0000673
so part of: AAAS
location: join(1180365..1180487,1181212..1181339,1181450..1181505,1181637..1181728,1182008..1182054,1182508..1182606,1183344..1183487,1183621..1183741,1183981..1184105,1184321..1184381,1185020..1185110,1185472..1185565,1185711..1185778,1185888..1185969,1186301..1186385,1186489..1186623)
location: region:1180365-1186623:1
so has part: feature:1180365-1180487:1:exon
so has part: feature:1181212-1181339:1:exon
so has part: feature:1181450-1181505:1:exon
so has part: feature:1181637-1181728:1:exon
so has part: feature:1182008-1182054:1:exon
so has part: feature:1182508-1182606:1:exon
so has part: feature:1183344-1183487:1:exon
so has part: feature:1183621-1183741:1:exon
so has part: feature:1183981-1184105:1:exon
so has part: feature:1184321-1184381:1:exon
so has part: feature:1185020-1185110:1:exon
so has part: feature:1185472-1185565:1:exon
so has part: feature:1185711-1185778:1:exon
so has part: feature:1185888-1185969:1:exon
so has part: feature:1186301-1186385:1:exon
so has part: feature:1186489-1186623:1:exon

XP_032569475.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1180365-1180487:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1181212-1181339:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1181450-1181505:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1181637-1181728:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1182008-1182054:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1182508-1182606:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1183344-1183487:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1183621-1183741:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1183981-1184105:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1184321-1184381:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1185020-1185110:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1185472-1185565:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1185711-1185778:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1185888-1185969:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1186301-1186385:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1186489-1186623:1:exon

MYG1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: MYG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1188104..1191082)
location: region:1188104-1191082:-1
so has part: feature:1188104-1191082:-1:exon
subclass of: SO_0000010

116800054
type: Gene
SIO_000068: ncbigene

position:1188104:-1
position: 1188104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1191082:-1
position: 1191082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1188104-1191082:-1:exon

MYG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: MYG1
product: MYG1 exonuclease
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 long SRA reads, 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032713613.1
SIO_010081: MYG1
subclass of: SO_0000673
so part of: MYG1
location: complement(join(1188104..1188582,1188872..1189053,1189375..1189497,1189631..1189780,1190134..1190293,1190372..1190484,1190815..1191082))
location: region:1188104-1191082:-1
so has part: feature:1190815-1191082:-1:exon
so has part: feature:1190372-1190484:-1:exon
so has part: feature:1190134-1190293:-1:exon
so has part: feature:1189631-1189780:-1:exon
so has part: feature:1189375-1189497:-1:exon
so has part: feature:1188872-1189053:-1:exon
so has part: feature:1188104-1188582:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1190815-1191082:-1:exon

position:1190815:-1
position: 1190815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1190372-1190484:-1:exon

position:1190372:-1
position: 1190372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1190484:-1
position: 1190484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1190134-1190293:-1:exon

position:1190134:-1
position: 1190134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1190293:-1
position: 1190293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1189631-1189780:-1:exon

position:1189631:-1
position: 1189631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1189780:-1
position: 1189780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1189375-1189497:-1:exon

position:1189375:-1
position: 1189375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1189497:-1
position: 1189497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1188872-1189053:-1:exon

position:1188872:-1
position: 1188872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1189053:-1
position: 1189053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1188104-1188582:-1:exon

position:1188582:-1
position: 1188582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MYG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: MYG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0160 protein MYG1, mitochondrial
translation: MRGLSHAVRLMAGTGIGTGIGGSGGSSMAGIGPGGSVATAVGQKRPRPEPTPLIGTHDGTFHCDEALACFLLRLLPRYRDAEVVRTRDPQRLAQCDVVVDVGGEYDPERHRYDHHQRSFTESMRSLRPDKPWSTKLSSAGLVYCHFGSQILAALLGQPEDGPVVTALYDKLYENFVEEIDAIDNGIAQAEGEPRYALTTTLSARVGHLNPRWNDPDQDTEAGFKRAMELVGSEFMDRLDFYHRAWLPARALVEEAVRRRFEVDSSGQVLELPQGGCPWKEHLFQLEKELALPRPLQLVLFPDRGGQWRVQSVPTGPHTFQSRLPLPEAWRGLRDEALSQLCGVPGCVFVHASGFIGGNRSREGALEMARRALRHGGGTQSG
SIO_010081: MYG1
subclass of: SO_0000673
so part of: MYG1
location: complement(join(1188402..1188582,1188872..1189053,1189375..1189497,1189631..1189780,1190134..1190293,1190372..1190484,1190815..1191051))
location: region:1188402-1191051:-1
so has part: feature:1190815-1191051:-1:exon
so has part: feature:1190372-1190484:-1:exon
so has part: feature:1190134-1190293:-1:exon
so has part: feature:1189631-1189780:-1:exon
so has part: feature:1189375-1189497:-1:exon
so has part: feature:1188872-1189053:-1:exon
so has part: feature:1188402-1188582:-1:exon

XP_032569504.1
type: Protein
SIO_000068: ncbiprotein

position:1188402:-1
position: 1188402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1191051:-1
position: 1191051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1190815-1191051:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1190372-1190484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1190134-1190293:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1189631-1189780:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1189375-1189497:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1188872-1189053:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1188402-1188582:-1:exon

VDR
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: VDR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1192466..1222435)
location: region:1192466-1222435:-1
so has part: feature:1192466-1222435:-1:exon
subclass of: SO_0000010

116800048
type: Gene
SIO_000068: ncbigene

position:1192466:-1
position: 1192466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1222435:-1
position: 1222435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1192466-1222435:-1:exon

VDR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: VDR
product: vitamin D receptor, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032713593.1
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: complement(join(1192466..1192966,1193497..1193613,1193877..1194028,1194503..1194674,1194839..1194962,1195144..1195328,1200540..1200670,1205246..1205396,1206779..1206856,1221060..1221125,1222387..1222435))
location: region:1192466-1222435:-1
so has part: feature:1222387-1222435:-1:exon
so has part: feature:1221060-1221125:-1:exon
so has part: feature:1206779-1206856:-1:exon
so has part: feature:1205246-1205396:-1:exon
so has part: feature:1200540-1200670:-1:exon
so has part: feature:1195144-1195328:-1:exon
so has part: feature:1194839-1194962:-1:exon
so has part: feature:1194503-1194674:-1:exon
so has part: feature:1193877-1194028:-1:exon
so has part: feature:1193497-1193613:-1:exon
so has part: feature:1192466-1192966:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1222387-1222435:-1:exon

position:1222387:-1
position: 1222387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1221060-1221125:-1:exon

position:1221060:-1
position: 1221060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1221125:-1
position: 1221125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1206779-1206856:-1:exon

position:1206779:-1
position: 1206779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206856:-1
position: 1206856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1205246-1205396:-1:exon

position:1205246:-1
position: 1205246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205396:-1
position: 1205396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1200540-1200670:-1:exon

position:1200540:-1
position: 1200540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1200670:-1
position: 1200670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1195144-1195328:-1:exon

position:1195144:-1
position: 1195144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1195328:-1
position: 1195328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1194839-1194962:-1:exon

position:1194839:-1
position: 1194839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1194962:-1
position: 1194962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1194503-1194674:-1:exon

position:1194503:-1
position: 1194503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1194674:-1
position: 1194674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1193877-1194028:-1:exon

position:1193877:-1
position: 1193877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1194028:-1
position: 1194028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1193497-1193613:-1:exon

position:1193497:-1
position: 1193497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1193613:-1
position: 1193613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1192466-1192966:-1:exon

position:1192966:-1
position: 1192966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VDR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: VDR
product: vitamin D receptor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032713590.1
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: complement(join(1192466..1192966,1193497..1193613,1193877..1194028,1194503..1194674,1194839..1194962,1195144..1195328,1200540..1200670,1205246..1205396,1206779..1206856,1218523..1218589,1221060..1221125,1222387..1222435))
location: region:1192466-1222435:-1
so has part: feature:1222387-1222435:-1:exon
so has part: feature:1221060-1221125:-1:exon
so has part: feature:1218523-1218589:-1:exon
so has part: feature:1206779-1206856:-1:exon
so has part: feature:1205246-1205396:-1:exon
so has part: feature:1200540-1200670:-1:exon
so has part: feature:1195144-1195328:-1:exon
so has part: feature:1194839-1194962:-1:exon
so has part: feature:1194503-1194674:-1:exon
so has part: feature:1193877-1194028:-1:exon
so has part: feature:1193497-1193613:-1:exon
so has part: feature:1192466-1192966:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1222387-1222435:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1221060-1221125:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1218523-1218589:-1:exon

position:1218523:-1
position: 1218523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1218589:-1
position: 1218589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1206779-1206856:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1205246-1205396:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1200540-1200670:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1195144-1195328:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1194839-1194962:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1194503-1194674:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1193877-1194028:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1193497-1193613:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1192466-1192966:-1:exon

VDR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: VDR
product: vitamin D receptor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032713592.1
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: complement(join(1192466..1192966,1193497..1193613,1193877..1194028,1194503..1194674,1194839..1194899,1195144..1195328,1200540..1200670,1205246..1205396,1206779..1206856,1218523..1218589,1221060..1221125,1222355..1222421))
location: region:1192466-1222421:-1
so has part: feature:1222355-1222421:-1:exon
so has part: feature:1221060-1221125:-1:exon
so has part: feature:1218523-1218589:-1:exon
so has part: feature:1206779-1206856:-1:exon
so has part: feature:1205246-1205396:-1:exon
so has part: feature:1200540-1200670:-1:exon
so has part: feature:1195144-1195328:-1:exon
so has part: feature:1194839-1194899:-1:exon
so has part: feature:1194503-1194674:-1:exon
so has part: feature:1193877-1194028:-1:exon
so has part: feature:1193497-1193613:-1:exon
so has part: feature:1192466-1192966:-1:exon

position:1222421:-1
position: 1222421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1222355-1222421:-1:exon

position:1222355:-1
position: 1222355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1221060-1221125:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1218523-1218589:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1206779-1206856:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1205246-1205396:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1200540-1200670:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1195144-1195328:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1194839-1194899:-1:exon

position:1194899:-1
position: 1194899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1194503-1194674:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1193877-1194028:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1193497-1193613:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1192466-1192966:-1:exon

VDR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: VDR
product: vitamin D receptor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032713589.1
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: complement(join(1192466..1192966,1193497..1193613,1193877..1194028,1194503..1194674,1194839..1194962,1195144..1195328,1200540..1200670,1205246..1205396,1206779..1206856,1218523..1218589,1221060..1221125,1222355..1222421))
location: region:1192466-1222421:-1
so has part: feature:1222355-1222421:-1:exon
so has part: feature:1221060-1221125:-1:exon
so has part: feature:1218523-1218589:-1:exon
so has part: feature:1206779-1206856:-1:exon
so has part: feature:1205246-1205396:-1:exon
so has part: feature:1200540-1200670:-1:exon
so has part: feature:1195144-1195328:-1:exon
so has part: feature:1194839-1194962:-1:exon
so has part: feature:1194503-1194674:-1:exon
so has part: feature:1193877-1194028:-1:exon
so has part: feature:1193497-1193613:-1:exon
so has part: feature:1192466-1192966:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1222355-1222421:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1221060-1221125:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1218523-1218589:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1206779-1206856:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1205246-1205396:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1200540-1200670:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1195144-1195328:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1194839-1194962:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1194503-1194674:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1193877-1194028:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1193497-1193613:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1192466-1192966:-1:exon

VDR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: VDR
product: vitamin D receptor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032713591.1
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: complement(join(1192466..1192966,1193497..1193613,1193877..1194028,1194503..1194674,1194839..1194962,1195144..1195328,1200540..1200670,1205246..1205396,1206779..1206856,1221060..1221125,1222355..1222415))
location: region:1192466-1222415:-1
so has part: feature:1222355-1222415:-1:exon
so has part: feature:1221060-1221125:-1:exon
so has part: feature:1206779-1206856:-1:exon
so has part: feature:1205246-1205396:-1:exon
so has part: feature:1200540-1200670:-1:exon
so has part: feature:1195144-1195328:-1:exon
so has part: feature:1194839-1194962:-1:exon
so has part: feature:1194503-1194674:-1:exon
so has part: feature:1193877-1194028:-1:exon
so has part: feature:1193497-1193613:-1:exon
so has part: feature:1192466-1192966:-1:exon

position:1222415:-1
position: 1222415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1222355-1222415:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1221060-1221125:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1206779-1206856:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1205246-1205396:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1200540-1200670:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1195144-1195328:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1194839-1194962:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1194503-1194674:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1193877-1194028:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1193497-1193613:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1192466-1192966:-1:exon

VDR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: VDR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitamin D3 receptor isoform X2
translation: MSQLQSSWDVQQQSMAYFPDPDMEPGAASTSLPDPAGDGDRNVPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKAMFTCPFNGDCKITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALKESLKPKLSEEQQRVIDILLEAHRKTYDPTYADFSKFRDLSEEDSTDLFGSDAFSTFPESVEPRMFSNLVLSEENDESSSMNIEFSQLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLSAEDQIVLLKSSAIEVIMLRSNQSFTLEDMSWTCGSNDFKYRVSDVTQAGHSMDLLEPLVKFQVGLKKLNLHEEEHVLLMAICILSPDRPGVQDTSLVESLQDRLSEILQTYIRCRHPPPGSRLLYAKMIQKLADLRSLNEEHSRQYRCLSFQPEHSMQLTPLVLEVFGNEIS
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: complement(join(1192707..1192966,1193497..1193613,1193877..1194028,1194503..1194674,1194839..1194899,1195144..1195328,1200540..1200670,1205246..1205396,1206779..1206842))
location: region:1192707-1206842:-1
so has part: feature:1206779-1206842:-1:exon
so has part: feature:1205246-1205396:-1:exon
so has part: feature:1200540-1200670:-1:exon
so has part: feature:1195144-1195328:-1:exon
so has part: feature:1194839-1194899:-1:exon
so has part: feature:1194503-1194674:-1:exon
so has part: feature:1193877-1194028:-1:exon
so has part: feature:1193497-1193613:-1:exon
so has part: feature:1192707-1192966:-1:exon

XP_032569483.1
type: Protein
SIO_000068: ncbiprotein

position:1192707:-1
position: 1192707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206842:-1
position: 1206842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1206779-1206842:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1205246-1205396:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1200540-1200670:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1195144-1195328:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1194839-1194899:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1194503-1194674:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1193877-1194028:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1193497-1193613:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1192707-1192966:-1:exon

VDR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: VDR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitamin D3 receptor isoform X1
translation: MSQLQSSWDVQQQSMAYFPDPDMEPGAASTSLPDPAGDGDRNVPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKAMFTCPFNGDCKITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALKESLKPKLSEEQQRVIDILLEAHRKTYDPTYADFSKFRPPVRSHPNNRGATKSSSLLTQDLSEEDSTDLFGSDAFSTFPESVEPRMFSNLVLSEENDESSSMNIEFSQLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLSAEDQIVLLKSSAIEVIMLRSNQSFTLEDMSWTCGSNDFKYRVSDVTQAGHSMDLLEPLVKFQVGLKKLNLHEEEHVLLMAICILSPDRPGVQDTSLVESLQDRLSEILQTYIRCRHPPPGSRLLYAKMIQKLADLRSLNEEHSRQYRCLSFQPEHSMQLTPLVLEVFGNEIS
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: complement(join(1192707..1192966,1193497..1193613,1193877..1194028,1194503..1194674,1194839..1194962,1195144..1195328,1200540..1200670,1205246..1205396,1206779..1206842))
location: region:1192707-1206842:-1
so has part: feature:1206779-1206842:-1:exon
so has part: feature:1205246-1205396:-1:exon
so has part: feature:1200540-1200670:-1:exon
so has part: feature:1195144-1195328:-1:exon
so has part: feature:1194839-1194962:-1:exon
so has part: feature:1194503-1194674:-1:exon
so has part: feature:1193877-1194028:-1:exon
so has part: feature:1193497-1193613:-1:exon
so has part: feature:1192707-1192966:-1:exon

XP_032569480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1206779-1206842:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1205246-1205396:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1200540-1200670:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1195144-1195328:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1194839-1194962:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1194503-1194674:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1193877-1194028:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1193497-1193613:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1192707-1192966:-1:exon

VDR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: VDR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitamin D3 receptor isoform X1
translation: MSQLQSSWDVQQQSMAYFPDPDMEPGAASTSLPDPAGDGDRNVPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKAMFTCPFNGDCKITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALKESLKPKLSEEQQRVIDILLEAHRKTYDPTYADFSKFRPPVRSHPNNRGATKSSSLLTQDLSEEDSTDLFGSDAFSTFPESVEPRMFSNLVLSEENDESSSMNIEFSQLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLSAEDQIVLLKSSAIEVIMLRSNQSFTLEDMSWTCGSNDFKYRVSDVTQAGHSMDLLEPLVKFQVGLKKLNLHEEEHVLLMAICILSPDRPGVQDTSLVESLQDRLSEILQTYIRCRHPPPGSRLLYAKMIQKLADLRSLNEEHSRQYRCLSFQPEHSMQLTPLVLEVFGNEIS
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: complement(join(1192707..1192966,1193497..1193613,1193877..1194028,1194503..1194674,1194839..1194962,1195144..1195328,1200540..1200670,1205246..1205396,1206779..1206842))
location: region:1192707-1206842:-1
so has part: feature:1206779-1206842:-1:exon
so has part: feature:1205246-1205396:-1:exon
so has part: feature:1200540-1200670:-1:exon
so has part: feature:1195144-1195328:-1:exon
so has part: feature:1194839-1194962:-1:exon
so has part: feature:1194503-1194674:-1:exon
so has part: feature:1193877-1194028:-1:exon
so has part: feature:1193497-1193613:-1:exon
so has part: feature:1192707-1192966:-1:exon

XP_032569481.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1206779-1206842:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1205246-1205396:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1200540-1200670:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1195144-1195328:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1194839-1194962:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1194503-1194674:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1193877-1194028:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1193497-1193613:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1192707-1192966:-1:exon

VDR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: VDR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitamin D3 receptor isoform X1
translation: MSQLQSSWDVQQQSMAYFPDPDMEPGAASTSLPDPAGDGDRNVPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKAMFTCPFNGDCKITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALKESLKPKLSEEQQRVIDILLEAHRKTYDPTYADFSKFRPPVRSHPNNRGATKSSSLLTQDLSEEDSTDLFGSDAFSTFPESVEPRMFSNLVLSEENDESSSMNIEFSQLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLSAEDQIVLLKSSAIEVIMLRSNQSFTLEDMSWTCGSNDFKYRVSDVTQAGHSMDLLEPLVKFQVGLKKLNLHEEEHVLLMAICILSPDRPGVQDTSLVESLQDRLSEILQTYIRCRHPPPGSRLLYAKMIQKLADLRSLNEEHSRQYRCLSFQPEHSMQLTPLVLEVFGNEIS
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: complement(join(1192707..1192966,1193497..1193613,1193877..1194028,1194503..1194674,1194839..1194962,1195144..1195328,1200540..1200670,1205246..1205396,1206779..1206842))
location: region:1192707-1206842:-1
so has part: feature:1206779-1206842:-1:exon
so has part: feature:1205246-1205396:-1:exon
so has part: feature:1200540-1200670:-1:exon
so has part: feature:1195144-1195328:-1:exon
so has part: feature:1194839-1194962:-1:exon
so has part: feature:1194503-1194674:-1:exon
so has part: feature:1193877-1194028:-1:exon
so has part: feature:1193497-1193613:-1:exon
so has part: feature:1192707-1192966:-1:exon

XP_032569482.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1206779-1206842:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1205246-1205396:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1200540-1200670:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1195144-1195328:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1194839-1194962:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1194503-1194674:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1193877-1194028:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1193497-1193613:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1192707-1192966:-1:exon

VDR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: VDR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitamin D3 receptor isoform X1
translation: MSQLQSSWDVQQQSMAYFPDPDMEPGAASTSLPDPAGDGDRNVPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKAMFTCPFNGDCKITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALKESLKPKLSEEQQRVIDILLEAHRKTYDPTYADFSKFRPPVRSHPNNRGATKSSSLLTQDLSEEDSTDLFGSDAFSTFPESVEPRMFSNLVLSEENDESSSMNIEFSQLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLSAEDQIVLLKSSAIEVIMLRSNQSFTLEDMSWTCGSNDFKYRVSDVTQAGHSMDLLEPLVKFQVGLKKLNLHEEEHVLLMAICILSPDRPGVQDTSLVESLQDRLSEILQTYIRCRHPPPGSRLLYAKMIQKLADLRSLNEEHSRQYRCLSFQPEHSMQLTPLVLEVFGNEIS
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: complement(join(1192707..1192966,1193497..1193613,1193877..1194028,1194503..1194674,1194839..1194962,1195144..1195328,1200540..1200670,1205246..1205396,1206779..1206842))
location: region:1192707-1206842:-1
so has part: feature:1206779-1206842:-1:exon
so has part: feature:1205246-1205396:-1:exon
so has part: feature:1200540-1200670:-1:exon
so has part: feature:1195144-1195328:-1:exon
so has part: feature:1194839-1194962:-1:exon
so has part: feature:1194503-1194674:-1:exon
so has part: feature:1193877-1194028:-1:exon
so has part: feature:1193497-1193613:-1:exon
so has part: feature:1192707-1192966:-1:exon

XP_032569484.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1206779-1206842:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1205246-1205396:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1200540-1200670:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1195144-1195328:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1194839-1194962:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1194503-1194674:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1193877-1194028:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1193497-1193613:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1192707-1192966:-1:exon

TMEM106C
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: TMEM106C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1227019..1231561
location: region:1227019-1231561:1
so has part: feature:1227019-1231561:1:exon
subclass of: SO_0000010

116800056
type: Gene
SIO_000068: ncbigene

position:1227019:1
position: 1227019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1231561:1
position: 1231561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1227019-1231561:1:exon

TMEM106C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: TMEM106C
product: transmembrane protein 106C, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032713619.1
SIO_010081: TMEM106C
subclass of: SO_0000673
so part of: TMEM106C
location: join(1227019..1227114,1228075..1228298,1228471..1228534,1229002..1229161,1229267..1229407,1229617..1229666,1229961..1230014,1230391..1230450,1230894..1231561)
location: region:1227019-1231561:1
so has part: feature:1227019-1227114:1:exon
so has part: feature:1228075-1228298:1:exon
so has part: feature:1228471-1228534:1:exon
so has part: feature:1229002-1229161:1:exon
so has part: feature:1229267-1229407:1:exon
so has part: feature:1229617-1229666:1:exon
so has part: feature:1229961-1230014:1:exon
so has part: feature:1230391-1230450:1:exon
so has part: feature:1230894-1231561:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1227019-1227114:1:exon

position:1227114:1
position: 1227114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1228075-1228298:1:exon

position:1228075:1
position: 1228075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1228298:1
position: 1228298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1228471-1228534:1:exon

position:1228471:1
position: 1228471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1228534:1
position: 1228534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1229002-1229161:1:exon

position:1229002:1
position: 1229002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1229161:1
position: 1229161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1229267-1229407:1:exon

position:1229267:1
position: 1229267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1229407:1
position: 1229407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1229617-1229666:1:exon

position:1229617:1
position: 1229617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1229666:1
position: 1229666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1229961-1230014:1:exon

position:1229961:1
position: 1229961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1230014:1
position: 1230014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1230391-1230450:1:exon

position:1230391:1
position: 1230391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1230450:1
position: 1230450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1230894-1231561:1:exon

position:1230894:1
position: 1230894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM106C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: TMEM106C
product: transmembrane protein 106C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032713617.1
SIO_010081: TMEM106C
subclass of: SO_0000673
so part of: TMEM106C
location: join(1227070..1227134,1228075..1228298,1228471..1228534,1229002..1229161,1229267..1229407,1229617..1229666,1229961..1230014,1230391..1230450,1230894..1231561)
location: region:1227070-1231561:1
so has part: feature:1227070-1227134:1:exon
so has part: feature:1228075-1228298:1:exon
so has part: feature:1228471-1228534:1:exon
so has part: feature:1229002-1229161:1:exon
so has part: feature:1229267-1229407:1:exon
so has part: feature:1229617-1229666:1:exon
so has part: feature:1229961-1230014:1:exon
so has part: feature:1230391-1230450:1:exon
so has part: feature:1230894-1231561:1:exon

position:1227070:1
position: 1227070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1227070-1227134:1:exon

position:1227134:1
position: 1227134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1228075-1228298:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1228471-1228534:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1229002-1229161:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1229267-1229407:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1229617-1229666:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1229961-1230014:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1230391-1230450:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1230894-1231561:1:exon

TMEM106C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: TMEM106C
product: transmembrane protein 106C, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032713621.1
SIO_010081: TMEM106C
subclass of: SO_0000673
so part of: TMEM106C
location: join(1227071..1227134,1228075..1228298,1228471..1228534,1229002..1229161,1229267..1229407,1229617..1229666,1229961..1230014,1230391..1231561)
location: region:1227071-1231561:1
so has part: feature:1227071-1227134:1:exon
so has part: feature:1228075-1228298:1:exon
so has part: feature:1228471-1228534:1:exon
so has part: feature:1229002-1229161:1:exon
so has part: feature:1229267-1229407:1:exon
so has part: feature:1229617-1229666:1:exon
so has part: feature:1229961-1230014:1:exon
so has part: feature:1230391-1231561:1:exon

position:1227071:1
position: 1227071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1227071-1227134:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1228075-1228298:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1228471-1228534:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1229002-1229161:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1229267-1229407:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1229617-1229666:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1229961-1230014:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1230391-1231561:1:exon

TMEM106C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: TMEM106C
product: transmembrane protein 106C, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032713620.1
SIO_010081: TMEM106C
subclass of: SO_0000673
so part of: TMEM106C
location: join(1227352..1227373,1228075..1228298,1228471..1228534,1229002..1229161,1229267..1229407,1229617..1229666,1229961..1230014,1230391..1230450,1230894..1231561)
location: region:1227352-1231561:1
so has part: feature:1227352-1227373:1:exon
so has part: feature:1228075-1228298:1:exon
so has part: feature:1228471-1228534:1:exon
so has part: feature:1229002-1229161:1:exon
so has part: feature:1229267-1229407:1:exon
so has part: feature:1229617-1229666:1:exon
so has part: feature:1229961-1230014:1:exon
so has part: feature:1230391-1230450:1:exon
so has part: feature:1230894-1231561:1:exon

position:1227352:1
position: 1227352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1227352-1227373:1:exon

position:1227373:1
position: 1227373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1228075-1228298:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1228471-1228534:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1229002-1229161:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1229267-1229407:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1229617-1229666:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1229961-1230014:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1230391-1230450:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1230894-1231561:1:exon

TMEM106C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: TMEM106C
product: transmembrane protein 106C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032713618.1
SIO_010081: TMEM106C
subclass of: SO_0000673
so part of: TMEM106C
location: join(1227410..1227602,1228075..1228298,1228471..1228534,1229002..1229161,1229267..1229407,1229617..1229666,1229961..1230014,1230391..1230450,1230894..1231561)
location: region:1227410-1231561:1
so has part: feature:1227410-1227602:1:exon
so has part: feature:1228075-1228298:1:exon
so has part: feature:1228471-1228534:1:exon
so has part: feature:1229002-1229161:1:exon
so has part: feature:1229267-1229407:1:exon
so has part: feature:1229617-1229666:1:exon
so has part: feature:1229961-1230014:1:exon
so has part: feature:1230391-1230450:1:exon
so has part: feature:1230894-1231561:1:exon

position:1227410:1
position: 1227410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1227410-1227602:1:exon

position:1227602:1
position: 1227602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1228075-1228298:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1228471-1228534:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1229002-1229161:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1229267-1229407:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1229617-1229666:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1229961-1230014:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1230391-1230450:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1230894-1231561:1:exon

TMEM106C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: TMEM106C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 106C isoform X1
translation: MGSVLSLPAGSAAPRQRKAAEEEEDDDLLDSQDRVEDIAEFPYVEFTGQDSITCPTCQGTGCIPTEQVNELVALIPYSDQRLRPQRTKLYVLLSVLLCLLVSGLVVFFLFPHSVLVEDDGIKVVRVWFDRKNSAVLLAITATLRIRNSNFYSVAVASLTSQVQYMNTVVGTQQVTNVSSIPPLSDKLVNFTVKAELGGAFSYVYSFCTYPKVKVHNIVVFMRSSVKFSYVGHTTQSSVERYRDVQGKLLPLPRALKGGKGIKTFGTTVILVCWQLINPGAPPAFVRVCVGLASSSSSTSSSSSDPSSPPLQGFETRACAARCVALYLCSTAGKQGFKPIFVGVWASEASLPGAAHS
SIO_010081: TMEM106C
subclass of: SO_0000673
so part of: TMEM106C
location: join(1228103..1228298,1228471..1228534,1229002..1229161,1229267..1229407,1229617..1229666,1229961..1230014,1230391..1230450,1230894..1231239)
location: region:1228103-1231239:1
so has part: feature:1228103-1228298:1:exon
so has part: feature:1228471-1228534:1:exon
so has part: feature:1229002-1229161:1:exon
so has part: feature:1229267-1229407:1:exon
so has part: feature:1229617-1229666:1:exon
so has part: feature:1229961-1230014:1:exon
so has part: feature:1230391-1230450:1:exon
so has part: feature:1230894-1231239:1:exon

XP_032569508.1
type: Protein
SIO_000068: ncbiprotein

position:1228103:1
position: 1228103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1231239:1
position: 1231239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1228103-1228298:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1228471-1228534:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1229002-1229161:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1229267-1229407:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1229617-1229666:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1229961-1230014:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1230391-1230450:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1230894-1231239:1:exon

TMEM106C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: TMEM106C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 106C isoform X1
translation: MGSVLSLPAGSAAPRQRKAAEEEEDDDLLDSQDRVEDIAEFPYVEFTGQDSITCPTCQGTGCIPTEQVNELVALIPYSDQRLRPQRTKLYVLLSVLLCLLVSGLVVFFLFPHSVLVEDDGIKVVRVWFDRKNSAVLLAITATLRIRNSNFYSVAVASLTSQVQYMNTVVGTQQVTNVSSIPPLSDKLVNFTVKAELGGAFSYVYSFCTYPKVKVHNIVVFMRSSVKFSYVGHTTQSSVERYRDVQGKLLPLPRALKGGKGIKTFGTTVILVCWQLINPGAPPAFVRVCVGLASSSSSTSSSSSDPSSPPLQGFETRACAARCVALYLCSTAGKQGFKPIFVGVWASEASLPGAAHS
SIO_010081: TMEM106C
subclass of: SO_0000673
so part of: TMEM106C
location: join(1228103..1228298,1228471..1228534,1229002..1229161,1229267..1229407,1229617..1229666,1229961..1230014,1230391..1230450,1230894..1231239)
location: region:1228103-1231239:1
so has part: feature:1228103-1228298:1:exon
so has part: feature:1228471-1228534:1:exon
so has part: feature:1229002-1229161:1:exon
so has part: feature:1229267-1229407:1:exon
so has part: feature:1229617-1229666:1:exon
so has part: feature:1229961-1230014:1:exon
so has part: feature:1230391-1230450:1:exon
so has part: feature:1230894-1231239:1:exon

XP_032569509.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1228103-1228298:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1228471-1228534:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1229002-1229161:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1229267-1229407:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1229617-1229666:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1229961-1230014:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1230391-1230450:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1230894-1231239:1:exon

TMEM106C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: TMEM106C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 106C isoform X1
translation: MGSVLSLPAGSAAPRQRKAAEEEEDDDLLDSQDRVEDIAEFPYVEFTGQDSITCPTCQGTGCIPTEQVNELVALIPYSDQRLRPQRTKLYVLLSVLLCLLVSGLVVFFLFPHSVLVEDDGIKVVRVWFDRKNSAVLLAITATLRIRNSNFYSVAVASLTSQVQYMNTVVGTQQVTNVSSIPPLSDKLVNFTVKAELGGAFSYVYSFCTYPKVKVHNIVVFMRSSVKFSYVGHTTQSSVERYRDVQGKLLPLPRALKGGKGIKTFGTTVILVCWQLINPGAPPAFVRVCVGLASSSSSTSSSSSDPSSPPLQGFETRACAARCVALYLCSTAGKQGFKPIFVGVWASEASLPGAAHS
SIO_010081: TMEM106C
subclass of: SO_0000673
so part of: TMEM106C
location: join(1228103..1228298,1228471..1228534,1229002..1229161,1229267..1229407,1229617..1229666,1229961..1230014,1230391..1230450,1230894..1231239)
location: region:1228103-1231239:1
so has part: feature:1228103-1228298:1:exon
so has part: feature:1228471-1228534:1:exon
so has part: feature:1229002-1229161:1:exon
so has part: feature:1229267-1229407:1:exon
so has part: feature:1229617-1229666:1:exon
so has part: feature:1229961-1230014:1:exon
so has part: feature:1230391-1230450:1:exon
so has part: feature:1230894-1231239:1:exon

XP_032569510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1228103-1228298:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1228471-1228534:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1229002-1229161:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1229267-1229407:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1229617-1229666:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1229961-1230014:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1230391-1230450:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1230894-1231239:1:exon

TMEM106C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: TMEM106C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 106C isoform X1
translation: MGSVLSLPAGSAAPRQRKAAEEEEDDDLLDSQDRVEDIAEFPYVEFTGQDSITCPTCQGTGCIPTEQVNELVALIPYSDQRLRPQRTKLYVLLSVLLCLLVSGLVVFFLFPHSVLVEDDGIKVVRVWFDRKNSAVLLAITATLRIRNSNFYSVAVASLTSQVQYMNTVVGTQQVTNVSSIPPLSDKLVNFTVKAELGGAFSYVYSFCTYPKVKVHNIVVFMRSSVKFSYVGHTTQSSVERYRDVQGKLLPLPRALKGGKGIKTFGTTVILVCWQLINPGAPPAFVRVCVGLASSSSSTSSSSSDPSSPPLQGFETRACAARCVALYLCSTAGKQGFKPIFVGVWASEASLPGAAHS
SIO_010081: TMEM106C
subclass of: SO_0000673
so part of: TMEM106C
location: join(1228103..1228298,1228471..1228534,1229002..1229161,1229267..1229407,1229617..1229666,1229961..1230014,1230391..1230450,1230894..1231239)
location: region:1228103-1231239:1
so has part: feature:1228103-1228298:1:exon
so has part: feature:1228471-1228534:1:exon
so has part: feature:1229002-1229161:1:exon
so has part: feature:1229267-1229407:1:exon
so has part: feature:1229617-1229666:1:exon
so has part: feature:1229961-1230014:1:exon
so has part: feature:1230391-1230450:1:exon
so has part: feature:1230894-1231239:1:exon

XP_032569511.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1228103-1228298:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1228471-1228534:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1229002-1229161:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1229267-1229407:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1229617-1229666:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1229961-1230014:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1230391-1230450:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1230894-1231239:1:exon

TMEM106C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: TMEM106C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 106C isoform X2
translation: MGSVLSLPAGSAAPRQRKAAEEEEDDDLLDSQDRVEDIAEFPYVEFTGQDSITCPTCQGTGCIPTEQVNELVALIPYSDQRLRPQRTKLYVLLSVLLCLLVSGLVVFFLFPHSVLVEDDGIKVVRVWFDRKNSAVLLAITATLRIRNSNFYSVAVASLTSQVQYMNTVVGTQQVTNVSSIPPLSDKLVNFTVKAELGGAFSYVYSFCTYPKVKVHNIVVFMRSSVKFSYVGHTTQSSVERYRYVDCSSNSTDPLAPGAA
SIO_010081: TMEM106C
subclass of: SO_0000673
so part of: TMEM106C
location: join(1228103..1228298,1228471..1228534,1229002..1229161,1229267..1229407,1229617..1229666,1229961..1230014,1230391..1230505)
location: region:1228103-1230505:1
so has part: feature:1228103-1228298:1:exon
so has part: feature:1228471-1228534:1:exon
so has part: feature:1229002-1229161:1:exon
so has part: feature:1229267-1229407:1:exon
so has part: feature:1229617-1229666:1:exon
so has part: feature:1229961-1230014:1:exon
so has part: feature:1230391-1230505:1:exon

XP_032569512.1
type: Protein
SIO_000068: ncbiprotein

position:1230505:1
position: 1230505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1228103-1228298:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1228471-1228534:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1229002-1229161:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1229267-1229407:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1229617-1229666:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1229961-1230014:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1230391-1230505:1:exon

COL2A1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: COL2A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1234458..1259134)
location: region:1234458-1259134:-1
so has part: feature:1234458-1259134:-1:exon
subclass of: SO_0000010

116799924
type: Gene
SIO_000068: ncbigene

position:1234458:-1
position: 1234458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1259134:-1
position: 1259134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1234458-1259134:-1:exon

COL2A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: COL2A1
product: collagen type II alpha 1 chain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 51 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032713385.1
SIO_010081: COL2A1
subclass of: SO_0000673
so part of: COL2A1
location: complement(join(1234458..1234708,1235637..1235879,1237084..1237271,1237905..1238193,1238292..1238399,1238580..1238633,1238782..1238889,1238976..1239029,1239410..1239517,1239600..1239653,1239827..1239934,1240977..1241084,1241178..1241339,1242246..1242299,1242380..1242433,1242576..1242683,1242829..1242882,1243437..1243490,1243580..1243633,1243745..1243798,1244411..1244518,1244642..1244740,1245837..1245881,1245992..1246045,1246178..1246231,1246442..1246495,1246651..1246704,1247386..1247484,1247592..1247645,1248984..1249082,1249191..1249244,1249341..1249448,1249830..1249883,1250973..1251071,1252064..1252108,1252240..1252338,1252466..1252519,1252638..1252682,1252816..1252869,1252977..1253021,1253883..1253936,1254021..1254074,1254214..1254267,1254376..1254429,1254518..1254571,1254697..1254741,1254927..1255004,1255086..1255187,1255325..1255378,1255521..1255553,1255657..1255689,1255936..1255952,1258220..1258415,1259066..1259134))
location: region:1234458-1259134:-1
so has part: feature:1259066-1259134:-1:exon
so has part: feature:1258220-1258415:-1:exon
so has part: feature:1255936-1255952:-1:exon
so has part: feature:1255657-1255689:-1:exon
so has part: feature:1255521-1255553:-1:exon
so has part: feature:1255325-1255378:-1:exon
so has part: feature:1255086-1255187:-1:exon
so has part: feature:1254927-1255004:-1:exon
so has part: feature:1254697-1254741:-1:exon
so has part: feature:1254518-1254571:-1:exon
so has part: feature:1254376-1254429:-1:exon
so has part: feature:1254214-1254267:-1:exon
so has part: feature:1254021-1254074:-1:exon
so has part: feature:1253883-1253936:-1:exon
so has part: feature:1252977-1253021:-1:exon
so has part: feature:1252816-1252869:-1:exon
so has part: feature:1252638-1252682:-1:exon
so has part: feature:1252466-1252519:-1:exon
so has part: feature:1252240-1252338:-1:exon
so has part: feature:1252064-1252108:-1:exon
so has part: feature:1250973-1251071:-1:exon
so has part: feature:1249830-1249883:-1:exon
so has part: feature:1249341-1249448:-1:exon
so has part: feature:1249191-1249244:-1:exon
so has part: feature:1248984-1249082:-1:exon
so has part: feature:1247592-1247645:-1:exon
so has part: feature:1247386-1247484:-1:exon
so has part: feature:1246651-1246704:-1:exon
so has part: feature:1246442-1246495:-1:exon
so has part: feature:1246178-1246231:-1:exon
so has part: feature:1245992-1246045:-1:exon
so has part: feature:1245837-1245881:-1:exon
so has part: feature:1244642-1244740:-1:exon
so has part: feature:1244411-1244518:-1:exon
so has part: feature:1243745-1243798:-1:exon
so has part: feature:1243580-1243633:-1:exon
so has part: feature:1243437-1243490:-1:exon
so has part: feature:1242829-1242882:-1:exon
so has part: feature:1242576-1242683:-1:exon
so has part: feature:1242380-1242433:-1:exon
so has part: feature:1242246-1242299:-1:exon
so has part: feature:1241178-1241339:-1:exon
so has part: feature:1240977-1241084:-1:exon
so has part: feature:1239827-1239934:-1:exon
so has part: feature:1239600-1239653:-1:exon
so has part: feature:1239410-1239517:-1:exon
so has part: feature:1238976-1239029:-1:exon
so has part: feature:1238782-1238889:-1:exon
so has part: feature:1238580-1238633:-1:exon
so has part: feature:1238292-1238399:-1:exon
so has part: feature:1237905-1238193:-1:exon
so has part: feature:1237084-1237271:-1:exon
so has part: feature:1235637-1235879:-1:exon
so has part: feature:1234458-1234708:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1259066-1259134:-1:exon

position:1259066:-1
position: 1259066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1258220-1258415:-1:exon

position:1258220:-1
position: 1258220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1258415:-1
position: 1258415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1255936-1255952:-1:exon

position:1255936:-1
position: 1255936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1255952:-1
position: 1255952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1255657-1255689:-1:exon

position:1255657:-1
position: 1255657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1255689:-1
position: 1255689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1255521-1255553:-1:exon

position:1255521:-1
position: 1255521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1255553:-1
position: 1255553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1255325-1255378:-1:exon

position:1255325:-1
position: 1255325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1255378:-1
position: 1255378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1255086-1255187:-1:exon

position:1255086:-1
position: 1255086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1255187:-1
position: 1255187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1254927-1255004:-1:exon

position:1254927:-1
position: 1254927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1255004:-1
position: 1255004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1254697-1254741:-1:exon

position:1254697:-1
position: 1254697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1254741:-1
position: 1254741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1254518-1254571:-1:exon

position:1254518:-1
position: 1254518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1254571:-1
position: 1254571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1254376-1254429:-1:exon

position:1254376:-1
position: 1254376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1254429:-1
position: 1254429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1254214-1254267:-1:exon

position:1254214:-1
position: 1254214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1254267:-1
position: 1254267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1254021-1254074:-1:exon

position:1254021:-1
position: 1254021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1254074:-1
position: 1254074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1253883-1253936:-1:exon

position:1253883:-1
position: 1253883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1253936:-1
position: 1253936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1252977-1253021:-1:exon

position:1252977:-1
position: 1252977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1253021:-1
position: 1253021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1252816-1252869:-1:exon

position:1252816:-1
position: 1252816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1252869:-1
position: 1252869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1252638-1252682:-1:exon

position:1252638:-1
position: 1252638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1252682:-1
position: 1252682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1252466-1252519:-1:exon

position:1252466:-1
position: 1252466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1252519:-1
position: 1252519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1252240-1252338:-1:exon

position:1252240:-1
position: 1252240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1252338:-1
position: 1252338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1252064-1252108:-1:exon

position:1252064:-1
position: 1252064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1252108:-1
position: 1252108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1250973-1251071:-1:exon

position:1250973:-1
position: 1250973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1251071:-1
position: 1251071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1249830-1249883:-1:exon

position:1249830:-1
position: 1249830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1249883:-1
position: 1249883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1249341-1249448:-1:exon

position:1249341:-1
position: 1249341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1249448:-1
position: 1249448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1249191-1249244:-1:exon

position:1249191:-1
position: 1249191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1249244:-1
position: 1249244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1248984-1249082:-1:exon

position:1248984:-1
position: 1248984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1249082:-1
position: 1249082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1247592-1247645:-1:exon

position:1247592:-1
position: 1247592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1247645:-1
position: 1247645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1247386-1247484:-1:exon

position:1247386:-1
position: 1247386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1247484:-1
position: 1247484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1246651-1246704:-1:exon

position:1246651:-1
position: 1246651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1246704:-1
position: 1246704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1246442-1246495:-1:exon

position:1246442:-1
position: 1246442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1246495:-1
position: 1246495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1246178-1246231:-1:exon

position:1246178:-1
position: 1246178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1246231:-1
position: 1246231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1245992-1246045:-1:exon

position:1245992:-1
position: 1245992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1246045:-1
position: 1246045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1245837-1245881:-1:exon

position:1245837:-1
position: 1245837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1245881:-1
position: 1245881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1244642-1244740:-1:exon

position:1244642:-1
position: 1244642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1244740:-1
position: 1244740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1244411-1244518:-1:exon

position:1244411:-1
position: 1244411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1244518:-1
position: 1244518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1243745-1243798:-1:exon

position:1243745:-1
position: 1243745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1243798:-1
position: 1243798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:1243580-1243633:-1:exon

position:1243580:-1
position: 1243580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1243633:-1
position: 1243633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:1243437-1243490:-1:exon

position:1243437:-1
position: 1243437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1243490:-1
position: 1243490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:1242829-1242882:-1:exon

position:1242829:-1
position: 1242829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1242882:-1
position: 1242882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:1242576-1242683:-1:exon

position:1242576:-1
position: 1242576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1242683:-1
position: 1242683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:1242380-1242433:-1:exon

position:1242380:-1
position: 1242380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1242433:-1
position: 1242433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:1242246-1242299:-1:exon

position:1242246:-1
position: 1242246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1242299:-1
position: 1242299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:1241178-1241339:-1:exon

position:1241178:-1
position: 1241178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1241339:-1
position: 1241339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:1240977-1241084:-1:exon

position:1240977:-1
position: 1240977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1241084:-1
position: 1241084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:1239827-1239934:-1:exon

position:1239827:-1
position: 1239827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1239934:-1
position: 1239934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:1239600-1239653:-1:exon

position:1239600:-1
position: 1239600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1239653:-1
position: 1239653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:1239410-1239517:-1:exon

position:1239410:-1
position: 1239410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1239517:-1
position: 1239517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:1238976-1239029:-1:exon

position:1238976:-1
position: 1238976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1239029:-1
position: 1239029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:1238782-1238889:-1:exon

position:1238782:-1
position: 1238782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1238889:-1
position: 1238889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:1238580-1238633:-1:exon

position:1238580:-1
position: 1238580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1238633:-1
position: 1238633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:1238292-1238399:-1:exon

position:1238292:-1
position: 1238292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1238399:-1
position: 1238399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:1237905-1238193:-1:exon

position:1237905:-1
position: 1237905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1238193:-1
position: 1238193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:1237084-1237271:-1:exon

position:1237084:-1
position: 1237084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1237271:-1
position: 1237271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 53
SIO_000628: feature:1235637-1235879:-1:exon

position:1235637:-1
position: 1235637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1235879:-1
position: 1235879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 54
SIO_000628: feature:1234458-1234708:-1:exon

position:1234708:-1
position: 1234708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

COL2A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: COL2A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(II) chain
translation: MGGESPGGFRRREQRLCLGKSPGAGSCLQDGQRYSDKDVWKPEPCRICVCDTGTVLCDEIICEELRDCPSPEIPFGECCPICPTDQPSGQPGPKGQKGEPGDIKDVVGPRGPPGPQGPAGEQGQRGDRGEKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPAGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPSGSPGPQGFQGNPGEPGEPGAAGPMGPRGPPGPPGKPGDDGETGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGAKGESGSPGENGSPGPMGPRGLPGERGRPGPSGAAGARGNDGLPGPAGPPGPVGPAGAPGFPGAPGSKGEAGPTGARGPEGAQGPRGESGTPGSPGPAGAPGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGETGPAGPQGAPGPAGEEGKRGARGEPGAAGPLGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPAGLAGPKGATGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPTGSPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGESGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGATGPAGPNGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGARGLTGPIGPPGPAGPNGEKGESGPPGPSGAAGARGAPGERGEPGAPGPAGFAGPPGADGQPGAKGEQGEPGQKGDAGTPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGPNGNPGPPGPPGSAGKDGPKGARGDAGPPGRAGDPGLQGPAGPPGEKGEPGEDGPAGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGSAGDRGPPGPVGPPGLTGPAGEPGREGNPGSDGPPGRDGAAGVKGDRGETGPVGAPGAPGAPGAPGPVGPTGKQGDRGETGAQGPMGPSGPAGARGMPGPQGPRGDKGETGEAGERGLKGHRGFTGLQGLPGPPGPSGDQGAAGPAGPSGPRGPPGPVGPSGKDGSNGMPGPIGPPGPRGRSGEPGPAGPPGNPGPPGPPGPPGTGIDMSAFAGLGQPEKGPDPIRYMRADEAAGSLRQHDVEVDATLKSLNNQIESIRSPEGSKKNPARTCRDIKLCHPEWKSGDYWIDPNQGCTLDAIKVFCNMETGETCVYPNPSSIPRKNWWTSKAKEKKHVWFAETINGGFHFSYGDEDLAPNTANIQMTFLRLLSTEGSQNVTYHCKNSVAYMDEDAGNLKKALLIQGSNDVEIRAEGNSRFTYSVLEDGCTKHTGKWGKTVIEYRSQKTSRLPIVDIAPMDIGGAEQEFGVDIGPVCFL
SIO_010081: COL2A1
subclass of: SO_0000673
so part of: COL2A1
location: complement(join(1234562..1234708,1235637..1235879,1237084..1237271,1237905..1238193,1238292..1238399,1238580..1238633,1238782..1238889,1238976..1239029,1239410..1239517,1239600..1239653,1239827..1239934,1240977..1241084,1241178..1241339,1242246..1242299,1242380..1242433,1242576..1242683,1242829..1242882,1243437..1243490,1243580..1243633,1243745..1243798,1244411..1244518,1244642..1244740,1245837..1245881,1245992..1246045,1246178..1246231,1246442..1246495,1246651..1246704,1247386..1247484,1247592..1247645,1248984..1249082,1249191..1249244,1249341..1249448,1249830..1249883,1250973..1251071,1252064..1252108,1252240..1252338,1252466..1252519,1252638..1252682,1252816..1252869,1252977..1253021,1253883..1253936,1254021..1254074,1254214..1254267,1254376..1254429,1254518..1254571,1254697..1254741,1254927..1255004,1255086..1255187,1255325..1255378,1255521..1255553,1255657..1255689,1255936..1255952,1258220..1258415,1259066..1259134))
location: region:1234562-1259134:-1
so has part: feature:1259066-1259134:-1:exon
so has part: feature:1258220-1258415:-1:exon
so has part: feature:1255936-1255952:-1:exon
so has part: feature:1255657-1255689:-1:exon
so has part: feature:1255521-1255553:-1:exon
so has part: feature:1255325-1255378:-1:exon
so has part: feature:1255086-1255187:-1:exon
so has part: feature:1254927-1255004:-1:exon
so has part: feature:1254697-1254741:-1:exon
so has part: feature:1254518-1254571:-1:exon
so has part: feature:1254376-1254429:-1:exon
so has part: feature:1254214-1254267:-1:exon
so has part: feature:1254021-1254074:-1:exon
so has part: feature:1253883-1253936:-1:exon
so has part: feature:1252977-1253021:-1:exon
so has part: feature:1252816-1252869:-1:exon
so has part: feature:1252638-1252682:-1:exon
so has part: feature:1252466-1252519:-1:exon
so has part: feature:1252240-1252338:-1:exon
so has part: feature:1252064-1252108:-1:exon
so has part: feature:1250973-1251071:-1:exon
so has part: feature:1249830-1249883:-1:exon
so has part: feature:1249341-1249448:-1:exon
so has part: feature:1249191-1249244:-1:exon
so has part: feature:1248984-1249082:-1:exon
so has part: feature:1247592-1247645:-1:exon
so has part: feature:1247386-1247484:-1:exon
so has part: feature:1246651-1246704:-1:exon
so has part: feature:1246442-1246495:-1:exon
so has part: feature:1246178-1246231:-1:exon
so has part: feature:1245992-1246045:-1:exon
so has part: feature:1245837-1245881:-1:exon
so has part: feature:1244642-1244740:-1:exon
so has part: feature:1244411-1244518:-1:exon
so has part: feature:1243745-1243798:-1:exon
so has part: feature:1243580-1243633:-1:exon
so has part: feature:1243437-1243490:-1:exon
so has part: feature:1242829-1242882:-1:exon
so has part: feature:1242576-1242683:-1:exon
so has part: feature:1242380-1242433:-1:exon
so has part: feature:1242246-1242299:-1:exon
so has part: feature:1241178-1241339:-1:exon
so has part: feature:1240977-1241084:-1:exon
so has part: feature:1239827-1239934:-1:exon
so has part: feature:1239600-1239653:-1:exon
so has part: feature:1239410-1239517:-1:exon
so has part: feature:1238976-1239029:-1:exon
so has part: feature:1238782-1238889:-1:exon
so has part: feature:1238580-1238633:-1:exon
so has part: feature:1238292-1238399:-1:exon
so has part: feature:1237905-1238193:-1:exon
so has part: feature:1237084-1237271:-1:exon
so has part: feature:1235637-1235879:-1:exon
so has part: feature:1234562-1234708:-1:exon

XP_032569276.1
type: Protein
SIO_000068: ncbiprotein

position:1234562:-1
position: 1234562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1259066-1259134:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1258220-1258415:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1255936-1255952:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1255657-1255689:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1255521-1255553:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1255325-1255378:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1255086-1255187:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1254927-1255004:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1254697-1254741:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1254518-1254571:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1254376-1254429:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1254214-1254267:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1254021-1254074:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1253883-1253936:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1252977-1253021:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1252816-1252869:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1252638-1252682:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1252466-1252519:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1252240-1252338:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1252064-1252108:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1250973-1251071:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1249830-1249883:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1249341-1249448:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1249191-1249244:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1248984-1249082:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1247592-1247645:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1247386-1247484:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1246651-1246704:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1246442-1246495:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1246178-1246231:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1245992-1246045:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1245837-1245881:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1244642-1244740:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1244411-1244518:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1243745-1243798:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1243580-1243633:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1243437-1243490:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1242829-1242882:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1242576-1242683:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1242380-1242433:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1242246-1242299:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1241178-1241339:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1240977-1241084:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1239827-1239934:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1239600-1239653:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1239410-1239517:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1238976-1239029:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1238782-1238889:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1238580-1238633:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1238292-1238399:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1237905-1238193:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1237084-1237271:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1235637-1235879:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1234562-1234708:-1:exon

ASIC1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: ASIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1276371..1285071
location: region:1276371-1285071:1
so has part: feature:1276371-1285071:1:exon
subclass of: SO_0000010

116800067
type: Gene
SIO_000068: ncbigene

position:1276371:1
position: 1276371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1285071:1
position: 1285071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1276371-1285071:1:exon

ASIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ASIC1
product: acid sensing ion channel subunit 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 6 bases in 5 codons; deleted 4 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032713636.1
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: join(1276371..1276846,1276882..1277435,1277491..1277646,1279910..1280059,1280472..1280599,1281241..1281388,1281947..1282006,1282092..1282241,1282326..1282420,1282603..1282681,1283187..1283291,1284858..1285071)
location: region:1276371-1285071:1
so has part: feature:1276371-1276846:1:exon
so has part: feature:1276882-1277435:1:exon
so has part: feature:1277491-1277646:1:exon
so has part: feature:1279910-1280059:1:exon
so has part: feature:1280472-1280599:1:exon
so has part: feature:1281241-1281388:1:exon
so has part: feature:1281947-1282006:1:exon
so has part: feature:1282092-1282241:1:exon
so has part: feature:1282326-1282420:1:exon
so has part: feature:1282603-1282681:1:exon
so has part: feature:1283187-1283291:1:exon
so has part: feature:1284858-1285071:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1276371-1276846:1:exon

position:1276846:1
position: 1276846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1276882-1277435:1:exon

position:1276882:1
position: 1276882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1277435:1
position: 1277435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1277491-1277646:1:exon

position:1277491:1
position: 1277491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1277646:1
position: 1277646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1279910-1280059:1:exon

position:1279910:1
position: 1279910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1280059:1
position: 1280059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1280472-1280599:1:exon

position:1280472:1
position: 1280472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1280599:1
position: 1280599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1281241-1281388:1:exon

position:1281241:1
position: 1281241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1281388:1
position: 1281388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1281947-1282006:1:exon

position:1281947:1
position: 1281947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1282006:1
position: 1282006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1282092-1282241:1:exon