Chiroxiphia lanceolata isolate bChiLan1 chromosome 24, bChiLan1.pri, whole genome shotgun sequence.
type: Entry
definition: Chiroxiphia lanceolata isolate bChiLan1 chromosome 24, bChiLan1.pri, whole genome shotgun sequence.
sequence version: NC_045660.1
sequence date: 2020-02-29
sequence: sequence
division: CON
label: NC_045660.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA603801
dblink: SAMN12620979
keyword: WGS
keyword: RefSeq
source: Chiroxiphia lanceolata (lance-tailed manakin)
organism: Chiroxiphia lanceolata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Pipridae; Chiroxiphia.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020556.1.\nAssembly name: bChiLan1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/01/03. The original whole-genome shotgun project has the\naccession WNMC00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 08-OCT-2019\nAssembly Method :: FALCON v. DNANexus 1.9.0; FALCON-Unzip v.\n DNANexus 1.0.6; purge_haplotigs v.\n v1.0.3+ 1.Nov.2018; scaff10x v. 4.1.0;\n Bionano Solve DLS v. 3.2.1; Salsa HiC v.\n 2.2; Arrow smrtanalysis Pacbio polishing\n & gap filling v. 6.0.0.47841; longranger\n align v. 2.2.2; freebayes Illumina\n polishing v. 1.3.1; gEVAL manual curation\n v. 2019-10-08; VGP assembly pipeline v.\n 1.5\nAssembly Name :: bChiLan1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 67.75x\nSequencing Technology :: PacBio Sequel I CLR; llumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Chiroxiphia lanceolata Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 7312998
topology: linear
so has quality: SO_0000987
location: 1..7312998
location: region:1-7312998:1
RO_0002162: 296741

NC_045660
type: RefSeq
SIO_000068: refseq

PRJNA603801
type: BioProject
SIO_000068: bioproject

SAMN12620979
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7312998:1
position: 7312998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-7312998:1:source
so part of: sequence
organism: Chiroxiphia lanceolata
mol type: genomic DNA
isolate: bChiLan1
chromosome: 24
sex: female
tissue type: isolated red blood cells
dev stage: adult
country: Panama: Isla Boca Btava
lat lon: 8.2166658 N 82.2666656 W
collection date: 14-Apr-2017
collected by: Emily DuVal

296741
type: Taxonomy
SIO_000068: taxonomy

LOC116797950
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116797950
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1341..17445
location: region:1341-17445:1
so has part: feature:1341-17445:1:exon
subclass of: SO_0000011

116797950
type: Gene
SIO_000068: ncbigene

position:1341:1
position: 1341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17445:1
position: 17445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1341-17445:1:exon

LOC116797950
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116797950
product: uncharacterized LOC116797950
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004360789.1
SIO_010081: LOC116797950
subclass of: SO_0000673
so part of: LOC116797950
location: join(1341..1425,3782..3786,17436..17445)
location: region:1341-17445:1
so has part: feature:1341-1425:1:exon
so has part: feature:3782-3786:1:exon
so has part: feature:17436-17445:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1341-1425:1:exon

position:1425:1
position: 1425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3782-3786:1:exon

position:3782:1
position: 3782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3786:1
position: 3786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:17436-17445:1:exon

position:17436:1
position: 17436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116797949
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116797949
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(23821..28862)
location: region:23821-28862:-1
so has part: feature:23821-28862:-1:exon
subclass of: SO_0000010

116797949
type: Gene
SIO_000068: ncbigene

position:23821:-1
position: 23821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28862:-1
position: 28862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23821-28862:-1:exon

LOC116797949
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116797949
product: uncharacterized LOC116797949, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032709970.1
SIO_010081: LOC116797949
subclass of: SO_0000673
so part of: LOC116797949
location: complement(join(23821..23963,24448..24573,24683..24819,25401..25517,25590..25713,25922..26018,26121..26194,26354..26430,27005..27261,27451..27604,28719..28862))
location: region:23821-28862:-1
so has part: feature:28719-28862:-1:exon
so has part: feature:27451-27604:-1:exon
so has part: feature:27005-27261:-1:exon
so has part: feature:26354-26430:-1:exon
so has part: feature:26121-26194:-1:exon
so has part: feature:25922-26018:-1:exon
so has part: feature:25590-25713:-1:exon
so has part: feature:25401-25517:-1:exon
so has part: feature:24683-24819:-1:exon
so has part: feature:24448-24573:-1:exon
so has part: feature:23821-23963:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28719-28862:-1:exon

position:28719:-1
position: 28719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27451-27604:-1:exon

position:27451:-1
position: 27451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27604:-1
position: 27604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:27005-27261:-1:exon

position:27005:-1
position: 27005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27261:-1
position: 27261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:26354-26430:-1:exon

position:26354:-1
position: 26354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26430:-1
position: 26430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:26121-26194:-1:exon

position:26121:-1
position: 26121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26194:-1
position: 26194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:25922-26018:-1:exon

position:25922:-1
position: 25922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26018:-1
position: 26018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:25590-25713:-1:exon

position:25590:-1
position: 25590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25713:-1
position: 25713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:25401-25517:-1:exon

position:25401:-1
position: 25401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25517:-1
position: 25517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:24683-24819:-1:exon

position:24683:-1
position: 24683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24819:-1
position: 24819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:24448-24573:-1:exon

position:24448:-1
position: 24448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24573:-1
position: 24573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:23821-23963:-1:exon

position:23963:-1
position: 23963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116797949
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116797949
product: uncharacterized LOC116797949, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032709971.1
SIO_010081: LOC116797949
subclass of: SO_0000673
so part of: LOC116797949
location: complement(join(23821..23963,24448..24573,24683..24819,25590..25713,25922..26018,26121..26194,26354..26430,27005..27261,27451..27604,27921..27982,28501..28689))
location: region:23821-28689:-1
so has part: feature:28501-28689:-1:exon
so has part: feature:27921-27982:-1:exon
so has part: feature:27451-27604:-1:exon
so has part: feature:27005-27261:-1:exon
so has part: feature:26354-26430:-1:exon
so has part: feature:26121-26194:-1:exon
so has part: feature:25922-26018:-1:exon
so has part: feature:25590-25713:-1:exon
so has part: feature:24683-24819:-1:exon
so has part: feature:24448-24573:-1:exon
so has part: feature:23821-23963:-1:exon

position:28689:-1
position: 28689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28501-28689:-1:exon

position:28501:-1
position: 28501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27921-27982:-1:exon

position:27921:-1
position: 27921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27982:-1
position: 27982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:27451-27604:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27005-27261:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:26354-26430:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:26121-26194:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:25922-26018:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:25590-25713:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:24683-24819:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:24448-24573:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:23821-23963:-1:exon

LOC116797949
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116797949
product: uncharacterized LOC116797949, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032709969.1
SIO_010081: LOC116797949
subclass of: SO_0000673
so part of: LOC116797949
location: complement(join(23821..23963,24448..24573,24683..24819,25401..25517,25590..25713,25922..26018,26121..26194,26354..26430,27005..27261,27451..27604,27921..27982,28501..28689))
location: region:23821-28689:-1
so has part: feature:28501-28689:-1:exon
so has part: feature:27921-27982:-1:exon
so has part: feature:27451-27604:-1:exon
so has part: feature:27005-27261:-1:exon
so has part: feature:26354-26430:-1:exon
so has part: feature:26121-26194:-1:exon
so has part: feature:25922-26018:-1:exon
so has part: feature:25590-25713:-1:exon
so has part: feature:25401-25517:-1:exon
so has part: feature:24683-24819:-1:exon
so has part: feature:24448-24573:-1:exon
so has part: feature:23821-23963:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28501-28689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27921-27982:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27451-27604:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27005-27261:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:26354-26430:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:26121-26194:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:25922-26018:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:25590-25713:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:25401-25517:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:24683-24819:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:24448-24573:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:23821-23963:-1:exon

LOC116797949
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116797949
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116797949 isoform X2
translation: MHLPRPLVMSQSGVPHHRVHSTGVLVPGLGTFAVVPEQVDGAEEVYVVRRPVFQLDMDVSCLQELMFPTVMIPGDIEIAPLDYWWLSQTTSLPPDILRDCVEETVLLYSFQLRDRQHLAFAFGDIGVLSCQDNILCMQFHRSCVKKLENWDTWVALLLTRLCVPDAGLNDGAGGMQAAWAHSFPRFQLTVSEAFSTWHMKVAEKHRVRTGAQEHPDKFSLPMLPKLRQGMRQQEPGMKPPASVLPLSPGIFPGMGETGGQESAPSARLDTTLLASENCQRALQEVCQLSAEWEHGNSCWREQKVEWVAWEAWAAREDQQMPQVSGPGGPWAPHPSLQPQRKGVTVTWGRAGTPLPVDEMVERFQPGTRHLSPRAIQVLHALEPHQTRRNIFTFLAENKRRRQEQQKQLCRYSSSGQGARAGVVAAAMAGSDRSGRLLTC
SIO_010081: LOC116797949
subclass of: SO_0000673
so part of: LOC116797949
location: complement(join(23873..23963,24448..24573,24683..24819,25401..25517,25590..25713,25922..26018,26121..26194,26354..26430,27005..27261,27451..27604,28719..28784))
location: region:23873-28784:-1
so has part: feature:28719-28784:-1:exon
so has part: feature:27451-27604:-1:exon
so has part: feature:27005-27261:-1:exon
so has part: feature:26354-26430:-1:exon
so has part: feature:26121-26194:-1:exon
so has part: feature:25922-26018:-1:exon
so has part: feature:25590-25713:-1:exon
so has part: feature:25401-25517:-1:exon
so has part: feature:24683-24819:-1:exon
so has part: feature:24448-24573:-1:exon
so has part: feature:23873-23963:-1:exon

XP_032565861.1
type: Protein
SIO_000068: ncbiprotein

position:23873:-1
position: 23873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28784:-1
position: 28784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28719-28784:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27451-27604:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27005-27261:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:26354-26430:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:26121-26194:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:25922-26018:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:25590-25713:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:25401-25517:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:24683-24819:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:24448-24573:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:23873-23963:-1:exon

LOC116797949
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116797949
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116797949 isoform X3
translation: MEGYCSVSINRKQSCLFPTLLQLSTEEVVAIWDVVSVYILGQMKQDKGVLVPGLGTFAVVPEQVDGAEEVYVVRRPVFQLDMDVSCLQELMFPTVMIPGDIEIAPLDYWWLSQTTSLPPDILRDCVEETVLLYSFQLRDRQHLAFAFGDIGVLSCQDNILCMQFHRSCVKKLENWDTWVALLLTRLCVPDAGLNDGAGGMQAAWAHSFPRFQLTVSEAFSTWHMKVAEKHRVRTGAQEHPDKFSLPMLPKLRQGMRQQEPGMKPPASVLPLSPGIFPGMGETGGQESAPSARLDTTLLASENCQRALQVSGPGGPWAPHPSLQPQRKGVTVTWGRAGTPLPVDEMVERFQPGTRHLSPRAIQVLHALEPHQTRRNIFTFLAENKRRRQEQQKQLCRYSSSGQGARAGVVAAAMAGSDRSGRLLTC
SIO_010081: LOC116797949
subclass of: SO_0000673
so part of: LOC116797949
location: complement(join(23873..23963,24448..24573,24683..24819,25590..25713,25922..26018,26121..26194,26354..26430,27005..27261,27451..27604,27921..27982,28501..28579))
location: region:23873-28579:-1
so has part: feature:28501-28579:-1:exon
so has part: feature:27921-27982:-1:exon
so has part: feature:27451-27604:-1:exon
so has part: feature:27005-27261:-1:exon
so has part: feature:26354-26430:-1:exon
so has part: feature:26121-26194:-1:exon
so has part: feature:25922-26018:-1:exon
so has part: feature:25590-25713:-1:exon
so has part: feature:24683-24819:-1:exon
so has part: feature:24448-24573:-1:exon
so has part: feature:23873-23963:-1:exon

XP_032565862.1
type: Protein
SIO_000068: ncbiprotein

position:28579:-1
position: 28579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28501-28579:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27921-27982:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27451-27604:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27005-27261:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:26354-26430:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:26121-26194:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:25922-26018:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:25590-25713:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:24683-24819:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:24448-24573:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:23873-23963:-1:exon

LOC116797949
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116797949
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116797949 isoform X1
translation: MEGYCSVSINRKQSCLFPTLLQLSTEEVVAIWDVVSVYILGQMKQDKGVLVPGLGTFAVVPEQVDGAEEVYVVRRPVFQLDMDVSCLQELMFPTVMIPGDIEIAPLDYWWLSQTTSLPPDILRDCVEETVLLYSFQLRDRQHLAFAFGDIGVLSCQDNILCMQFHRSCVKKLENWDTWVALLLTRLCVPDAGLNDGAGGMQAAWAHSFPRFQLTVSEAFSTWHMKVAEKHRVRTGAQEHPDKFSLPMLPKLRQGMRQQEPGMKPPASVLPLSPGIFPGMGETGGQESAPSARLDTTLLASENCQRALQEVCQLSAEWEHGNSCWREQKVEWVAWEAWAAREDQQMPQVSGPGGPWAPHPSLQPQRKGVTVTWGRAGTPLPVDEMVERFQPGTRHLSPRAIQVLHALEPHQTRRNIFTFLAENKRRRQEQQKQLCRYSSSGQGARAGVVAAAMAGSDRSGRLLTC
SIO_010081: LOC116797949
subclass of: SO_0000673
so part of: LOC116797949
location: complement(join(23873..23963,24448..24573,24683..24819,25401..25517,25590..25713,25922..26018,26121..26194,26354..26430,27005..27261,27451..27604,27921..27982,28501..28579))
location: region:23873-28579:-1
so has part: feature:28501-28579:-1:exon
so has part: feature:27921-27982:-1:exon
so has part: feature:27451-27604:-1:exon
so has part: feature:27005-27261:-1:exon
so has part: feature:26354-26430:-1:exon
so has part: feature:26121-26194:-1:exon
so has part: feature:25922-26018:-1:exon
so has part: feature:25590-25713:-1:exon
so has part: feature:25401-25517:-1:exon
so has part: feature:24683-24819:-1:exon
so has part: feature:24448-24573:-1:exon
so has part: feature:23873-23963:-1:exon

XP_032565860.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28501-28579:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27921-27982:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27451-27604:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27005-27261:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:26354-26430:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:26121-26194:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:25922-26018:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:25590-25713:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:25401-25517:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:24683-24819:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:24448-24573:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:23873-23963:-1:exon

LOC116798132
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116798132
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(56703..72121)
location: region:56703-72121:-1
so has part: feature:56703-72121:-1:exon
subclass of: SO_0000010

116798132
type: Gene
SIO_000068: ncbigene

position:56703:-1
position: 56703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72121:-1
position: 72121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56703-72121:-1:exon

LOC116798132
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116798132
product: ATPase MORC2-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 56% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032710303.1
SIO_010081: LOC116798132
subclass of: SO_0000673
so part of: LOC116798132
location: complement(join(56703..56980,57863..58100,59372..59563,59872..60013,60787..60841,60937..61077,61478..61845,61957..62031,62339..62623,70382..70558,71217..71524,71974..72121))
location: region:56703-72121:-1
so has part: feature:71974-72121:-1:exon
so has part: feature:71217-71524:-1:exon
so has part: feature:70382-70558:-1:exon
so has part: feature:62339-62623:-1:exon
so has part: feature:61957-62031:-1:exon
so has part: feature:61478-61845:-1:exon
so has part: feature:60937-61077:-1:exon
so has part: feature:60787-60841:-1:exon
so has part: feature:59872-60013:-1:exon
so has part: feature:59372-59563:-1:exon
so has part: feature:57863-58100:-1:exon
so has part: feature:56703-56980:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:71974-72121:-1:exon

position:71974:-1
position: 71974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:71217-71524:-1:exon

position:71217:-1
position: 71217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71524:-1
position: 71524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:70382-70558:-1:exon

position:70382:-1
position: 70382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70558:-1
position: 70558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:62339-62623:-1:exon

position:62339:-1
position: 62339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62623:-1
position: 62623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:61957-62031:-1:exon

position:61957:-1
position: 61957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62031:-1
position: 62031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:61478-61845:-1:exon

position:61478:-1
position: 61478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61845:-1
position: 61845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:60937-61077:-1:exon

position:60937:-1
position: 60937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61077:-1
position: 61077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:60787-60841:-1:exon

position:60787:-1
position: 60787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60841:-1
position: 60841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:59872-60013:-1:exon

position:59872:-1
position: 59872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60013:-1
position: 60013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:59372-59563:-1:exon

position:59372:-1
position: 59372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59563:-1
position: 59563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:57863-58100:-1:exon

position:57863:-1
position: 57863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58100:-1
position: 58100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:56703-56980:-1:exon

position:56980:-1
position: 56980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116798132
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116798132
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: ATPase MORC2-like
translation: MAIDHTLPWWSFMSSYRSDSDGKENEIFGCASENPSNCCRCADSSTSRSVTPAIQPGPAGSAVQSPDRRHPATSLAYPRHPTRTRREPESCWRWAHPWRAFVGGEQGRERKAEEGVEADRRWPARGREPGLEEAATRRAADRRLRRWWGAGLLPGHSPEFLVRAVKGSRELRAPAGLLSVSGDGRWTVLWLSRSRHGDAAPYSAALAHTDSKKTTSFAIVATAERKVVFLLHLGWDVGAILCENGTGPAVLSDLVWPSLHARCEAAEQKQKVPLGTLKKDSKSHEEKQKQLTEKIRQQQEKLEALQKTTPIRSQADLKKLPLEVNARPSGEHTRPQXPPLPDVIKNAPSRPPGSSPPPKSSSQLKKSSSDCPNTSSSKLASTLFTEEVSTSRTHQNTVTSGKSNSTLKTLAKQGTATKSLSAGLQSPKSPRETPSPKAAKVPAVKKSASGKCSQASSTRKRTLNIPEDGSEEEGEHKKERTKRGKFVAVKEEKDSNEVVVELTDSAGEEELVELKKAQKDKGLHVEVRVNKEWFTGRVTAVERGRHAIRWKVKFDYIPTDTTPRDLWVEKGSEDVRLMKPPSPEYQAPDTQQEEEVVVAEPSTSDCVRIEPDTTGPSSSQETVDLLVQILRSVLSLDMSSVVFCLLQKEYFKQYEAGLQNLCNSYQTRADARAKACEENLRNSERKLRETEEKLQKLRTNIMALLQKVQEDIDINTDDELDAYIEDLIMKGD
SIO_010081: LOC116798132
subclass of: SO_0000673
so part of: LOC116798132
location: complement(join(56912..56980,57863..58100,59372..59563,59872..60013,60787..60841,60937..61077,61478..61845,61957..62031,62339..62623,70382..70558,71217..71524,71974..72121))
location: region:56912-72121:-1
so has part: feature:71974-72121:-1:exon
so has part: feature:71217-71524:-1:exon
so has part: feature:70382-70558:-1:exon
so has part: feature:62339-62623:-1:exon
so has part: feature:61957-62031:-1:exon
so has part: feature:61478-61845:-1:exon
so has part: feature:60937-61077:-1:exon
so has part: feature:60787-60841:-1:exon
so has part: feature:59872-60013:-1:exon
so has part: feature:59372-59563:-1:exon
so has part: feature:57863-58100:-1:exon
so has part: feature:56912-56980:-1:exon

XP_032566194.1
type: Protein
SIO_000068: ncbiprotein

position:56912:-1
position: 56912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71974-72121:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:71217-71524:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:70382-70558:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:62339-62623:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:61957-62031:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:61478-61845:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:60937-61077:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:60787-60841:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:59872-60013:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:59372-59563:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:57863-58100:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:56912-56980:-1:exon

RLF
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: RLF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 111377..161615
location: region:111377-161615:1
so has part: feature:111377-161615:1:exon
subclass of: SO_0000010

116797947
type: Gene
SIO_000068: ncbigene

position:111377:1
position: 111377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161615:1
position: 161615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111377-161615:1:exon

RLF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: RLF
product: RLF zinc finger, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 4 long SRA reads, 11 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032709963.1
SIO_010081: RLF
subclass of: SO_0000673
so part of: RLF
location: join(111377..111566,116760..116914,123902..123983,133183..133315,142655..142857,148810..148946,154195..154336,156305..161615)
location: region:111377-161615:1
so has part: feature:111377-111566:1:exon
so has part: feature:116760-116914:1:exon
so has part: feature:123902-123983:1:exon
so has part: feature:133183-133315:1:exon
so has part: feature:142655-142857:1:exon
so has part: feature:148810-148946:1:exon
so has part: feature:154195-154336:1:exon
so has part: feature:156305-161615:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:111377-111566:1:exon

position:111566:1
position: 111566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:116760-116914:1:exon

position:116760:1
position: 116760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116914:1
position: 116914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:123902-123983:1:exon

position:123902:1
position: 123902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123983:1
position: 123983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:133183-133315:1:exon

position:133183:1
position: 133183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133315:1
position: 133315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:142655-142857:1:exon

position:142655:1
position: 142655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142857:1
position: 142857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:148810-148946:1:exon

position:148810:1
position: 148810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148946:1
position: 148946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:154195-154336:1:exon

position:154195:1
position: 154195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154336:1
position: 154336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:156305-161615:1:exon

position:156305:1
position: 156305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RLF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: RLF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein Rlf isoform X1
translation: MADAEAEAATRPEVPRVVPALRARLWQLQAELREQEVSEASSRAYCRGFCQTLLQYAGSRGASEHILPFLEVYRISIQSFANARPYLTTECEDVLLVLGRLVLSCFELLLSIPESELPHEVWLGFHQSIQDSHDALLEFGNNNLQILVDITREGVWKNPVLLKILSQQPVETEEANKLITREGPSFLQMRIKHLMKSNCIPQATFLSKLCADSPEIANVSSFRQAYITCVCSMLPNEDSIKEIAKVDCKEVLDIICNLESEGQENTAFILCTTYLTHQLQTANVYCSWELTLFWSKLQRRIDPSLDSFLERCRQFGIIAKTLQHLFFLIRVIQSEAEEAGLAVSVLLCVRALQIRSSGSDEMKTSVCKTIACLLPEDLEVRRACQLTEFLLEPTLSGFNALEELYIQPDQKFDEENAVVPNSLRCELLLALKAYWPFDPEFWDWKTLKRHCLKLLGKVASDSEDDAGCHMSLNETDMLETFFSDYDETKEHKYYDEKDTINHPKEKARIKKPIGSSERYQRWLQYKFFCVLCKRECIEARILHHSKMHMEDGVYTCPVCTKRFKRKEFFVPHVMEHVKMPPSRTHRPKKKIILKKERSPQNTTASSSPPPAFQERSHQSQFPESFDNDTHEYVTFSQLENCQLQDRDIYPCPGTDCSRVFKQFKYLSVHLKAEHQNNDENAKHYLDMKNRREKCAFCRRHFMTSFHLREHERVHCGPQPYMCVSMDCYARFGSVNELLNHKQTHDDLRYKCELNGCNIVFSDLGQLYHHEAQHFRDASYTCNFFGCKKFYYSKTEFQNHLAAHNIQMSNGEGKQMLNLERSISKDKCSYLPESQLLEQSENSNLNDNLDPSGSQEIPEVKEESLSDSEDLNSESNFSLHCGEHRADAAVSKGQVSPLLLETVAHSQSVPGLVVSQEGVFHPANVKQQCSNVAVCFDEKTLSCGFEGCCSSHKNSRSMQKHLRRAHPYNFKGKRNMEMKTKYFLNLLSNAQDSKSLTDMNTELGHNSDTNADSPESVCCAVDGKGNNGLREETCPSSPETSFYDSSKESNIEDNMLELMLGLKHLSLKNANIQNSSRHKPFGGYSSRDAKCPELVDETTSKFQLQEQQDNLPSQYLTQLAAKPFFCECHGCTCEFVTREALLMHYVRKHNYSKEMVLQLNMFQHRYSPFKCHICQRSFTRKTHLRIHYRNKHQIGCERVAHKVCPNEKLDHVGLCAEDMHKNGTAPAPTCANSIGFTDHSDHSEQLCHPKKDDCCSETDLESSEETDNNVTRKASNITSLDTHREELEARQGRGSKRTVAKGNLCYILHKYHKPFHCIHKSCNSAFTNQKGLIRHYRTVHQYNKEQLCLDKDKARTKRELVKCKKIFACKHKECGKRFLCSKALAKHCSDFHNEILEDQKLLSEAESARFACNQAHCPAVFYTFNKLKQHLIEEHANEEKLNKDFEIHCDLNGCNRIFTNYSNYSQHVYFRHSEYYDSLFGNRKEEDDNEDKDKNEQNYLKDSFDTSKQNGKQLKEKAKRISRSREKHLLSFKTKEEALQMCKEKSNQTQYPCMVQGCLSVVKLESSIVRHYKRTHQMTNVYIEQRLQKLVLCVKCGIMIEKQSCSDTASDLDRKGVEVNEDKSANPEPVQESDKALVPDPASDPPKVSNEDQKQSPPSSASFDASAFVHSGTLKYNDSSNNTCFEEPNVRETAVSKTEDFSENSERENSSCFSSLQLELPKEKDPEGCQHSAINLNGKRNVLCATKDKFQKPPVSKPFDLKTYKPMGFESSFLKFIQESEGKDDDDDDDDCDEVVEWESSEQLPIDETLKKEGDSQGDTPVNNFVNEENIIITPNNPGQLTEIQPLLSESSSAPSLENLRAILDKALTDCGDLALKQLHYLRPVVVLERSKFSTPLIDLFPTKKADELCVGST
SIO_010081: RLF
subclass of: SO_0000673
so part of: RLF
location: join(111414..111566,116760..116914,123902..123983,133183..133315,142655..142857,148810..148946,154195..154336,156305..161041)
location: region:111414-161041:1
so has part: feature:111414-111566:1:exon
so has part: feature:116760-116914:1:exon
so has part: feature:123902-123983:1:exon
so has part: feature:133183-133315:1:exon
so has part: feature:142655-142857:1:exon
so has part: feature:148810-148946:1:exon
so has part: feature:154195-154336:1:exon
so has part: feature:156305-161041:1:exon

XP_032565854.1
type: Protein
SIO_000068: ncbiprotein

position:111414:1
position: 111414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161041:1
position: 161041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111414-111566:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:116760-116914:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:123902-123983:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133183-133315:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:142655-142857:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:148810-148946:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:154195-154336:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:156305-161041:1:exon

RLF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: RLF
product: RLF zinc finger, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 2 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032709964.1
SIO_010081: RLF
subclass of: SO_0000673
so part of: RLF
location: join(116866..116914,118459..118628,123902..123983,133183..133315,142655..142857,148810..148946,154195..154336,156305..161608)
location: region:116866-161608:1
so has part: feature:116866-116914:1:exon
so has part: feature:118459-118628:1:exon
so has part: feature:123902-123983:1:exon
so has part: feature:133183-133315:1:exon
so has part: feature:142655-142857:1:exon
so has part: feature:148810-148946:1:exon
so has part: feature:154195-154336:1:exon
so has part: feature:156305-161608:1:exon

position:116866:1
position: 116866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161608:1
position: 161608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116866-116914:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:118459-118628:1:exon

position:118459:1
position: 118459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118628:1
position: 118628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:123902-123983:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133183-133315:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:142655-142857:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:148810-148946:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:154195-154336:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:156305-161608:1:exon

RLF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: RLF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein Rlf isoform X2
translation: MRNTRSEVEDRERSCFELLLSIPESELPHEVWLGFHQSIQDSHDALLEFGNNNLQILVDITREGVWKNPVLLKILSQQPVETEEANKLITREGPSFLQMRIKHLMKSNCIPQATFLSKLCADSPEIANVSSFRQAYITCVCSMLPNEDSIKEIAKVDCKEVLDIICNLESEGQENTAFILCTTYLTHQLQTANVYCSWELTLFWSKLQRRIDPSLDSFLERCRQFGIIAKTLQHLFFLIRVIQSEAEEAGLAVSVLLCVRALQIRSSGSDEMKTSVCKTIACLLPEDLEVRRACQLTEFLLEPTLSGFNALEELYIQPDQKFDEENAVVPNSLRCELLLALKAYWPFDPEFWDWKTLKRHCLKLLGKVASDSEDDAGCHMSLNETDMLETFFSDYDETKEHKYYDEKDTINHPKEKARIKKPIGSSERYQRWLQYKFFCVLCKRECIEARILHHSKMHMEDGVYTCPVCTKRFKRKEFFVPHVMEHVKMPPSRTHRPKKKIILKKERSPQNTTASSSPPPAFQERSHQSQFPESFDNDTHEYVTFSQLENCQLQDRDIYPCPGTDCSRVFKQFKYLSVHLKAEHQNNDENAKHYLDMKNRREKCAFCRRHFMTSFHLREHERVHCGPQPYMCVSMDCYARFGSVNELLNHKQTHDDLRYKCELNGCNIVFSDLGQLYHHEAQHFRDASYTCNFFGCKKFYYSKTEFQNHLAAHNIQMSNGEGKQMLNLERSISKDKCSYLPESQLLEQSENSNLNDNLDPSGSQEIPEVKEESLSDSEDLNSESNFSLHCGEHRADAAVSKGQVSPLLLETVAHSQSVPGLVVSQEGVFHPANVKQQCSNVAVCFDEKTLSCGFEGCCSSHKNSRSMQKHLRRAHPYNFKGKRNMEMKTKYFLNLLSNAQDSKSLTDMNTELGHNSDTNADSPESVCCAVDGKGNNGLREETCPSSPETSFYDSSKESNIEDNMLELMLGLKHLSLKNANIQNSSRHKPFGGYSSRDAKCPELVDETTSKFQLQEQQDNLPSQYLTQLAAKPFFCECHGCTCEFVTREALLMHYVRKHNYSKEMVLQLNMFQHRYSPFKCHICQRSFTRKTHLRIHYRNKHQIGCERVAHKVCPNEKLDHVGLCAEDMHKNGTAPAPTCANSIGFTDHSDHSEQLCHPKKDDCCSETDLESSEETDNNVTRKASNITSLDTHREELEARQGRGSKRTVAKGNLCYILHKYHKPFHCIHKSCNSAFTNQKGLIRHYRTVHQYNKEQLCLDKDKARTKRELVKCKKIFACKHKECGKRFLCSKALAKHCSDFHNEILEDQKLLSEAESARFACNQAHCPAVFYTFNKLKQHLIEEHANEEKLNKDFEIHCDLNGCNRIFTNYSNYSQHVYFRHSEYYDSLFGNRKEEDDNEDKDKNEQNYLKDSFDTSKQNGKQLKEKAKRISRSREKHLLSFKTKEEALQMCKEKSNQTQYPCMVQGCLSVVKLESSIVRHYKRTHQMTNVYIEQRLQKLVLCVKCGIMIEKQSCSDTASDLDRKGVEVNEDKSANPEPVQESDKALVPDPASDPPKVSNEDQKQSPPSSASFDASAFVHSGTLKYNDSSNNTCFEEPNVRETAVSKTEDFSENSERENSSCFSSLQLELPKEKDPEGCQHSAINLNGKRNVLCATKDKFQKPPVSKPFDLKTYKPMGFESSFLKFIQESEGKDDDDDDDDCDEVVEWESSEQLPIDETLKKEGDSQGDTPVNNFVNEENIIITPNNPGQLTEIQPLLSESSSAPSLENLRAILDKALTDCGDLALKQLHYLRPVVVLERSKFSTPLIDLFPTKKADELCVGST
SIO_010081: RLF
subclass of: SO_0000673
so part of: RLF
location: join(118591..118628,123902..123983,133183..133315,142655..142857,148810..148946,154195..154336,156305..161041)
location: region:118591-161041:1
so has part: feature:118591-118628:1:exon
so has part: feature:123902-123983:1:exon
so has part: feature:133183-133315:1:exon
so has part: feature:142655-142857:1:exon
so has part: feature:148810-148946:1:exon
so has part: feature:154195-154336:1:exon
so has part: feature:156305-161041:1:exon

XP_032565855.1
type: Protein
SIO_000068: ncbiprotein

position:118591:1
position: 118591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118591-118628:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:123902-123983:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133183-133315:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:142655-142857:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148810-148946:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:154195-154336:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:156305-161041:1:exon

ZMPSTE24
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: ZMPSTE24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 165422..194033
location: region:165422-194033:1
so has part: feature:165422-194033:1:exon
subclass of: SO_0000010

116797948
type: Gene
SIO_000068: ncbigene

position:165422:1
position: 165422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194033:1
position: 194033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165422-194033:1:exon

ZMPSTE24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ZMPSTE24
product: zinc metallopeptidase STE24, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 5 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_032709966.1
SIO_010081: ZMPSTE24
subclass of: SO_0000673
so part of: ZMPSTE24
location: join(165422..165563,166850..166996,170837..170923,171479..171595,181010..181162,185488..185629,187898..188058,189464..189568,191790..191933,192237..194033)
location: region:165422-194033:1
so has part: feature:165422-165563:1:exon
so has part: feature:166850-166996:1:exon
so has part: feature:170837-170923:1:exon
so has part: feature:171479-171595:1:exon
so has part: feature:181010-181162:1:exon
so has part: feature:185488-185629:1:exon
so has part: feature:187898-188058:1:exon
so has part: feature:189464-189568:1:exon
so has part: feature:191790-191933:1:exon
so has part: feature:192237-194033:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:165422-165563:1:exon

position:165563:1
position: 165563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:166850-166996:1:exon

position:166850:1
position: 166850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166996:1
position: 166996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:170837-170923:1:exon

position:170837:1
position: 170837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170923:1
position: 170923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:171479-171595:1:exon

position:171479:1
position: 171479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171595:1
position: 171595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:181010-181162:1:exon

position:181010:1
position: 181010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181162:1
position: 181162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:185488-185629:1:exon

position:185488:1
position: 185488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185629:1
position: 185629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:187898-188058:1:exon

position:187898:1
position: 187898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188058:1
position: 188058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:189464-189568:1:exon

position:189464:1
position: 189464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189568:1
position: 189568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:191790-191933:1:exon

position:191790:1
position: 191790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191933:1
position: 191933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:192237-194033:1:exon

position:192237:1
position: 192237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZMPSTE24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ZMPSTE24
product: zinc metallopeptidase STE24, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032709965.1
SIO_010081: ZMPSTE24
subclass of: SO_0000673
so part of: ZMPSTE24
location: join(165425..165563,166850..166996,170837..170923,171479..171634,181010..181162,185488..185629,187898..188058,189464..189568,191790..191933,192237..194033)
location: region:165425-194033:1
so has part: feature:165425-165563:1:exon
so has part: feature:166850-166996:1:exon
so has part: feature:170837-170923:1:exon
so has part: feature:171479-171634:1:exon
so has part: feature:181010-181162:1:exon
so has part: feature:185488-185629:1:exon
so has part: feature:187898-188058:1:exon
so has part: feature:189464-189568:1:exon
so has part: feature:191790-191933:1:exon
so has part: feature:192237-194033:1:exon

position:165425:1
position: 165425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165425-165563:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:166850-166996:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:170837-170923:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171479-171634:1:exon

position:171634:1
position: 171634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:181010-181162:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:185488-185629:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:187898-188058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:189464-189568:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:191790-191933:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:192237-194033:1:exon

ZMPSTE24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ZMPSTE24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CAAX prenyl protease 1 homolog isoform X1
translation: MAGGAAMALPGELWAELPAERRIFCSVLLFSWAVYLWEAFLAHRQRRVYRTTTHVPQELGQIMDSETFEKSRLYQLDKSTFSFWSGLYSEIEGTMILLCGGIPFLWKLSGQISGHAGFGQEYEIVQSLVFLLLATLFSAVTGLPWSLYNTFVIEEKHGFNQQVLQRALVLTQWLQTLGFFFKDAIKKFVVTQCILLPVTSLLLYIIKIGGDYFFIYAWLFTLVVSLVLVTIYADYIAPLFDKFIPLPEGELKQQIETMAKSIDFPLTKVYVVEGSKRSSHSNAYFYGFFKNKRIVLFDTLLEDYSALNKEPAEGEDGENEETKSKTKNKKQGCKNEEVLAVLGHELGHWKLGHTVKNIIISQMNSFLCFFLFAVLIGRKELFTAFGFYDTQPTLIGLMIIFQFIFSPYNEVLSFCLTVLSRRFEFQADAFAKELGKAKDLYSALIKLNKDNLGFPVSDWIFSMWHYSHPPLLERLQALKDAKQE
SIO_010081: ZMPSTE24
subclass of: SO_0000673
so part of: ZMPSTE24
location: join(165429..165563,166850..166996,170837..170923,171479..171634,181010..181162,185488..185629,187898..188058,189464..189568,191790..191933,192237..192461)
location: region:165429-192461:1
so has part: feature:165429-165563:1:exon
so has part: feature:166850-166996:1:exon
so has part: feature:170837-170923:1:exon
so has part: feature:171479-171634:1:exon
so has part: feature:181010-181162:1:exon
so has part: feature:185488-185629:1:exon
so has part: feature:187898-188058:1:exon
so has part: feature:189464-189568:1:exon
so has part: feature:191790-191933:1:exon
so has part: feature:192237-192461:1:exon

XP_032565856.1
type: Protein
SIO_000068: ncbiprotein

position:165429:1
position: 165429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192461:1
position: 192461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165429-165563:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:166850-166996:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:170837-170923:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171479-171634:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:181010-181162:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:185488-185629:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:187898-188058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:189464-189568:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:191790-191933:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:192237-192461:1:exon

ZMPSTE24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ZMPSTE24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CAAX prenyl protease 1 homolog isoform X2
translation: MAGGAAMALPGELWAELPAERRIFCSVLLFSWAVYLWEAFLAHRQRRVYRTTTHVPQELGQIMDSETFEKSRLYQLDKSTFSFWSGLYSEIEGTMILLCGGIPFLWKLSGQISGHAGFGQEYEIVQSLVFLLLATLFSAVTGLPWSLYNTFVIEEKHGFNQQTLGFFFKDAIKKFVVTQCILLPVTSLLLYIIKIGGDYFFIYAWLFTLVVSLVLVTIYADYIAPLFDKFIPLPEGELKQQIETMAKSIDFPLTKVYVVEGSKRSSHSNAYFYGFFKNKRIVLFDTLLEDYSALNKEPAEGEDGENEETKSKTKNKKQGCKNEEVLAVLGHELGHWKLGHTVKNIIISQMNSFLCFFLFAVLIGRKELFTAFGFYDTQPTLIGLMIIFQFIFSPYNEVLSFCLTVLSRRFEFQADAFAKELGKAKDLYSALIKLNKDNLGFPVSDWIFSMWHYSHPPLLERLQALKDAKQE
SIO_010081: ZMPSTE24
subclass of: SO_0000673
so part of: ZMPSTE24
location: join(165429..165563,166850..166996,170837..170923,171479..171595,181010..181162,185488..185629,187898..188058,189464..189568,191790..191933,192237..192461)
location: region:165429-192461:1
so has part: feature:165429-165563:1:exon
so has part: feature:166850-166996:1:exon
so has part: feature:170837-170923:1:exon
so has part: feature:171479-171595:1:exon
so has part: feature:181010-181162:1:exon
so has part: feature:185488-185629:1:exon
so has part: feature:187898-188058:1:exon
so has part: feature:189464-189568:1:exon
so has part: feature:191790-191933:1:exon
so has part: feature:192237-192461:1:exon

XP_032565857.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:165429-165563:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:166850-166996:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:170837-170923:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171479-171595:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:181010-181162:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:185488-185629:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:187898-188058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:189464-189568:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:191790-191933:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:192237-192461:1:exon

ZMPSTE24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ZMPSTE24
product: zinc metallopeptidase STE24, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032709967.1
SIO_010081: ZMPSTE24
subclass of: SO_0000673
so part of: ZMPSTE24
location: join(166238..166342,166850..166996,170837..170923,171479..171634,181010..181162,185488..185629,187898..188058,189464..189568,191790..191933,192237..194033)
location: region:166238-194033:1
so has part: feature:166238-166342:1:exon
so has part: feature:166850-166996:1:exon
so has part: feature:170837-170923:1:exon
so has part: feature:171479-171634:1:exon
so has part: feature:181010-181162:1:exon
so has part: feature:185488-185629:1:exon
so has part: feature:187898-188058:1:exon
so has part: feature:189464-189568:1:exon
so has part: feature:191790-191933:1:exon
so has part: feature:192237-194033:1:exon

position:166238:1
position: 166238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166238-166342:1:exon

position:166342:1
position: 166342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:166850-166996:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:170837-170923:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171479-171634:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:181010-181162:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:185488-185629:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:187898-188058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:189464-189568:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:191790-191933:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:192237-194033:1:exon

ZMPSTE24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ZMPSTE24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CAAX prenyl protease 1 homolog isoform X3
translation: MDSETFEKSRLYQLDKSTFSFWSGLYSEIEGTMILLCGGIPFLWKLSGQISGHAGFGQEYEIVQSLVFLLLATLFSAVTGLPWSLYNTFVIEEKHGFNQQVLQRALVLTQWLQTLGFFFKDAIKKFVVTQCILLPVTSLLLYIIKIGGDYFFIYAWLFTLVVSLVLVTIYADYIAPLFDKFIPLPEGELKQQIETMAKSIDFPLTKVYVVEGSKRSSHSNAYFYGFFKNKRIVLFDTLLEDYSALNKEPAEGEDGENEETKSKTKNKKQGCKNEEVLAVLGHELGHWKLGHTVKNIIISQMNSFLCFFLFAVLIGRKELFTAFGFYDTQPTLIGLMIIFQFIFSPYNEVLSFCLTVLSRRFEFQADAFAKELGKAKDLYSALIKLNKDNLGFPVSDWIFSMWHYSHPPLLERLQALKDAKQE
SIO_010081: ZMPSTE24
subclass of: SO_0000673
so part of: ZMPSTE24
location: join(166901..166996,170837..170923,171479..171634,181010..181162,185488..185629,187898..188058,189464..189568,191790..191933,192237..192461)
location: region:166901-192461:1
so has part: feature:166901-166996:1:exon
so has part: feature:170837-170923:1:exon
so has part: feature:171479-171634:1:exon
so has part: feature:181010-181162:1:exon
so has part: feature:185488-185629:1:exon
so has part: feature:187898-188058:1:exon
so has part: feature:189464-189568:1:exon
so has part: feature:191790-191933:1:exon
so has part: feature:192237-192461:1:exon

XP_032565858.1
type: Protein
SIO_000068: ncbiprotein

position:166901:1
position: 166901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166901-166996:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:170837-170923:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:171479-171634:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:181010-181162:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:185488-185629:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:187898-188058:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:189464-189568:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:191790-191933:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:192237-192461:1:exon

KDM1A
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: KDM1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 195961..247508
location: region:195961-247508:1
so has part: feature:195961-247508:1:exon
subclass of: SO_0000010

116798133
type: Gene
SIO_000068: ncbigene

position:195961:1
position: 195961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247508:1
position: 247508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195961-247508:1:exon

KDM1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: KDM1A
product: lysine demethylase 1A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 5 long SRA reads, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032710305.1
SIO_010081: KDM1A
subclass of: SO_0000673
so part of: KDM1A
location: join(195961..196248,198881..199046,203897..203956,207524..207657,210427..210505,211500..211592,212339..212445,215074..215155,217874..217968,223165..223307,223828..223918,224639..224773,226749..226822,227499..227610,227972..228104,228756..228943,229363..229477,241606..241733,242077..242223,243254..247508)
location: region:195961-247508:1
so has part: feature:195961-196248:1:exon
so has part: feature:198881-199046:1:exon
so has part: feature:203897-203956:1:exon
so has part: feature:207524-207657:1:exon
so has part: feature:210427-210505:1:exon
so has part: feature:211500-211592:1:exon
so has part: feature:212339-212445:1:exon
so has part: feature:215074-215155:1:exon
so has part: feature:217874-217968:1:exon
so has part: feature:223165-223307:1:exon
so has part: feature:223828-223918:1:exon
so has part: feature:224639-224773:1:exon
so has part: feature:226749-226822:1:exon
so has part: feature:227499-227610:1:exon
so has part: feature:227972-228104:1:exon
so has part: feature:228756-228943:1:exon
so has part: feature:229363-229477:1:exon
so has part: feature:241606-241733:1:exon
so has part: feature:242077-242223:1:exon
so has part: feature:243254-247508:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:195961-196248:1:exon

position:196248:1
position: 196248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:198881-199046:1:exon

position:198881:1
position: 198881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199046:1
position: 199046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:203897-203956:1:exon

position:203897:1
position: 203897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203956:1
position: 203956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:207524-207657:1:exon

position:207524:1
position: 207524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207657:1
position: 207657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:210427-210505:1:exon

position:210427:1
position: 210427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210505:1
position: 210505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:211500-211592:1:exon

position:211500:1
position: 211500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211592:1
position: 211592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:212339-212445:1:exon

position:212339:1
position: 212339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212445:1
position: 212445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:215074-215155:1:exon

position:215074:1
position: 215074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215155:1
position: 215155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:217874-217968:1:exon

position:217874:1
position: 217874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217968:1
position: 217968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:223165-223307:1:exon

position:223165:1
position: 223165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223307:1
position: 223307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:223828-223918:1:exon

position:223828:1
position: 223828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223918:1
position: 223918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:224639-224773:1:exon

position:224639:1
position: 224639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224773:1
position: 224773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:226749-226822:1:exon

position:226749:1
position: 226749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226822:1
position: 226822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:227499-227610:1:exon

position:227499:1
position: 227499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227610:1
position: 227610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:227972-228104:1:exon

position:227972:1
position: 227972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228104:1
position: 228104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:228756-228943:1:exon

position:228756:1
position: 228756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228943:1
position: 228943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:229363-229477:1:exon

position:229363:1
position: 229363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229477:1
position: 229477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:241606-241733:1:exon

position:241606:1
position: 241606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241733:1
position: 241733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:242077-242223:1:exon

position:242077:1
position: 242077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242223:1
position: 242223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:243254-247508:1:exon

position:243254:1
position: 243254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KDM1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: KDM1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific histone demethylase 1A
translation: MLAAGGKKGAEAAAGGEAGPEAPVPPPAAAGALGSSSDSGGAAERTPRKKEPPRASPPGGVSEPSAAGAAPAPGGETTGIAETPEGRRTSRRKRAKVEYREMDESLANLSEDEYYSEEERNAKAEKEKKLPPPPPPAPAEEENESEPEEPSGQAGGLQDDSSGGYGDGQASGVEGAAFQSRLPHDRMTSQEAACFPDIISGPQQTQKVFLYIRNRTLQLWLDNPKIQLTFEATIQQLEAPYNSDTVLVHRVHSYLERHGLINFGIYKRVKPLPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTVLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKDLLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPAIPGAPQPVPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMYTLPRQPAPGVPPQQAASM
SIO_010081: KDM1A
subclass of: SO_0000673
so part of: KDM1A
location: join(195961..196248,198881..199046,203897..203956,207524..207657,210427..210505,211500..211592,212339..212445,215074..215155,217874..217968,223165..223307,223828..223918,224639..224773,226749..226822,227499..227610,227972..228104,228756..228943,229363..229477,241606..241733,242077..242223,243254..243439)
location: region:195961-243439:1
so has part: feature:195961-196248:1:exon
so has part: feature:198881-199046:1:exon
so has part: feature:203897-203956:1:exon
so has part: feature:207524-207657:1:exon
so has part: feature:210427-210505:1:exon
so has part: feature:211500-211592:1:exon
so has part: feature:212339-212445:1:exon
so has part: feature:215074-215155:1:exon
so has part: feature:217874-217968:1:exon
so has part: feature:223165-223307:1:exon
so has part: feature:223828-223918:1:exon
so has part: feature:224639-224773:1:exon
so has part: feature:226749-226822:1:exon
so has part: feature:227499-227610:1:exon
so has part: feature:227972-228104:1:exon
so has part: feature:228756-228943:1:exon
so has part: feature:229363-229477:1:exon
so has part: feature:241606-241733:1:exon
so has part: feature:242077-242223:1:exon
so has part: feature:243254-243439:1:exon

XP_032566196.1
type: Protein
SIO_000068: ncbiprotein

position:243439:1
position: 243439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195961-196248:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:198881-199046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:203897-203956:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:207524-207657:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:210427-210505:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:211500-211592:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:212339-212445:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:215074-215155:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:217874-217968:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:223165-223307:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:223828-223918:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:224639-224773:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:226749-226822:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:227499-227610:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:227972-228104:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:228756-228943:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:229363-229477:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:241606-241733:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:242077-242223:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:243254-243439:1:exon

LUZP1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LUZP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(252431..290531)
location: region:252431-290531:-1
so has part: feature:252431-290531:-1:exon
subclass of: SO_0000010

116798059
type: Gene
SIO_000068: ncbigene

position:252431:-1
position: 252431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290531:-1
position: 290531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252431-290531:-1:exon

LUZP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LUZP1
product: leucine zipper protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032710143.1
SIO_010081: LUZP1
subclass of: SO_0000673
so part of: LUZP1
location: complement(join(252431..256992,258483..258647,262727..265996,290416..290531))
location: region:252431-290531:-1
so has part: feature:290416-290531:-1:exon
so has part: feature:262727-265996:-1:exon
so has part: feature:258483-258647:-1:exon
so has part: feature:252431-256992:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:290416-290531:-1:exon

position:290416:-1
position: 290416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:262727-265996:-1:exon

position:262727:-1
position: 262727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265996:-1
position: 265996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:258483-258647:-1:exon

position:258483:-1
position: 258483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258647:-1
position: 258647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:252431-256992:-1:exon

position:256992:-1
position: 256992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LUZP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LUZP1
product: leucine zipper protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 long SRA reads, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032710144.1
SIO_010081: LUZP1
subclass of: SO_0000673
so part of: LUZP1
location: complement(join(252432..256992,258483..258647,262727..265996,284065..284293))
location: region:252432-284293:-1
so has part: feature:284065-284293:-1:exon
so has part: feature:262727-265996:-1:exon
so has part: feature:258483-258647:-1:exon
so has part: feature:252432-256992:-1:exon

position:252432:-1
position: 252432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284293:-1
position: 284293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284065-284293:-1:exon

position:284065:-1
position: 284065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:262727-265996:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:258483-258647:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:252432-256992:-1:exon

LUZP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LUZP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine zipper protein 1
translation: MAEFTGYKETSNRHLRFKLQSLSRRLDELEEATKNLQKAEDELLDLQDKVIQAEGSNSSMLADIEALRKRVLKIEGKDEEIRKAEELCRLMKEKLEEEESLTRELKSEIEHLQRRMAELEKLEEAFGRSKNDCTQLCLSLNEEKNLTKKISTELEILRVKVKELEASEDRLDKTEQSLTGELEKLKSLAMSFITERKHFNEREKQNEKIIQELTQKLEQNNKLNRADQTRNASNLLERSSNNLLDRNDLRIEDDLTSALPSKETRRKGSVDYLKHVENETRNKSENQKNKNQEDNKVKDLTQEIEKLKTQIKRFESLEEELKKVRAKNNDLQDSYLSEQNKNKLLTGQLEEIKMQIKNQKDLENGDFENEDTSFTSRGKHDRPKYRGVTADLTAAKHKPRELSPQQRRERARNRDFSVSNDSYSHGGKQVPSSSLMNRKAGKTSGTSTLSDAAVTDTKRLEEKSLVSTISPGQKEGCIMQNEGRRSKEQPSVLSRYPPAAQEQKSWKAPSKSVGDTSLRSKAEKPSQVLRGSCQNGADTRDEKSSKEESMVSLAEKLKTSQAEVSDCTGDMQLARGNHTSSNGTASAYRYHLSSHVSASDSAGSKVEAVNTSAASHRQPLEGRAKRAIISQEKEVADTSLESVKFSILTKRSHRSRSQEDILQILTGFDKEETEQSSSSATDHVNVGLKTDSKTIQSNQEKLNLDEESGRGKKTTTQSDFETRKKVSSKQFSNSRGVFRASLFENEKNTVNDEDSTKCIKPSDASTGGLKSRRSFSPREALRSKAIIKPAIVEKDMKAVMGGTVSEAESEKRKSVFKMVTNKMTSSITIFPSEPTAPRTTADIAAKERHVTSSNIRAASNEPSPSITNNVPTPFEISINKSPLKLSEMDRSGEAVPRSKAETVVSRSSIMLKTSELTERNSELPSETISWKSHGSSDAASSETRHVAMRSSWRTRQGLHSLEDSQTEVEKSAASSTTNLCRSEVDLSKVEGNSARTDSLEQASARTSATANSWSAPELGSRRTKSNLSASELLTRKSYASDPTAAAAWHRTALPDESKDFVSSSRRKQYSSSEYLLQADIPGKRPATKVELQDPESNSPAQPGLQAEEQGTPRACRTSRR
SIO_010081: LUZP1
subclass of: SO_0000673
so part of: LUZP1
location: complement(join(256957..256992,258483..258647,262727..265888))
location: region:256957-265888:-1
so has part: feature:262727-265888:-1:exon
so has part: feature:258483-258647:-1:exon
so has part: feature:256957-256992:-1:exon

XP_032566034.1
type: Protein
SIO_000068: ncbiprotein

position:256957:-1
position: 256957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265888:-1
position: 265888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262727-265888:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:258483-258647:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:256957-256992:-1:exon

LUZP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LUZP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine zipper protein 1
translation: MAEFTGYKETSNRHLRFKLQSLSRRLDELEEATKNLQKAEDELLDLQDKVIQAEGSNSSMLADIEALRKRVLKIEGKDEEIRKAEELCRLMKEKLEEEESLTRELKSEIEHLQRRMAELEKLEEAFGRSKNDCTQLCLSLNEEKNLTKKISTELEILRVKVKELEASEDRLDKTEQSLTGELEKLKSLAMSFITERKHFNEREKQNEKIIQELTQKLEQNNKLNRADQTRNASNLLERSSNNLLDRNDLRIEDDLTSALPSKETRRKGSVDYLKHVENETRNKSENQKNKNQEDNKVKDLTQEIEKLKTQIKRFESLEEELKKVRAKNNDLQDSYLSEQNKNKLLTGQLEEIKMQIKNQKDLENGDFENEDTSFTSRGKHDRPKYRGVTADLTAAKHKPRELSPQQRRERARNRDFSVSNDSYSHGGKQVPSSSLMNRKAGKTSGTSTLSDAAVTDTKRLEEKSLVSTISPGQKEGCIMQNEGRRSKEQPSVLSRYPPAAQEQKSWKAPSKSVGDTSLRSKAEKPSQVLRGSCQNGADTRDEKSSKEESMVSLAEKLKTSQAEVSDCTGDMQLARGNHTSSNGTASAYRYHLSSHVSASDSAGSKVEAVNTSAASHRQPLEGRAKRAIISQEKEVADTSLESVKFSILTKRSHRSRSQEDILQILTGFDKEETEQSSSSATDHVNVGLKTDSKTIQSNQEKLNLDEESGRGKKTTTQSDFETRKKVSSKQFSNSRGVFRASLFENEKNTVNDEDSTKCIKPSDASTGGLKSRRSFSPREALRSKAIIKPAIVEKDMKAVMGGTVSEAESEKRKSVFKMVTNKMTSSITIFPSEPTAPRTTADIAAKERHVTSSNIRAASNEPSPSITNNVPTPFEISINKSPLKLSEMDRSGEAVPRSKAETVVSRSSIMLKTSELTERNSELPSETISWKSHGSSDAASSETRHVAMRSSWRTRQGLHSLEDSQTEVEKSAASSTTNLCRSEVDLSKVEGNSARTDSLEQASARTSATANSWSAPELGSRRTKSNLSASELLTRKSYASDPTAAAAWHRTALPDESKDFVSSSRRKQYSSSEYLLQADIPGKRPATKVELQDPESNSPAQPGLQAEEQGTPRACRTSRR
SIO_010081: LUZP1
subclass of: SO_0000673
so part of: LUZP1
location: complement(join(256957..256992,258483..258647,262727..265888))
location: region:256957-265888:-1
so has part: feature:262727-265888:-1:exon
so has part: feature:258483-258647:-1:exon
so has part: feature:256957-256992:-1:exon

XP_032566035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:262727-265888:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:258483-258647:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:256957-256992:-1:exon

HTR1D
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: HTR1D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(307083..319295)
location: region:307083-319295:-1
so has part: feature:307083-319295:-1:exon
subclass of: SO_0000010

116798096
type: Gene
SIO_000068: ncbigene

position:307083:-1
position: 307083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319295:-1
position: 319295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307083-319295:-1:exon

HTR1D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: HTR1D
product: 5-hydroxytryptamine receptor 1D
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 9 bases in 9 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032710229.1
SIO_010081: HTR1D
subclass of: SO_0000673
so part of: HTR1D
location: complement(join(307083..310149,319232..319295))
location: region:307083-319295:-1
so has part: feature:319232-319295:-1:exon
so has part: feature:307083-310149:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:319232-319295:-1:exon

position:319232:-1
position: 319232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:307083-310149:-1:exon

position:310149:-1
position: 310149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HTR1D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: HTR1D
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 9 bases in 9 codons; deleted 1 base in 1 codon; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(308810..308812),aa:OTHER)
transl except: (pos:complement(308795..308797),aa:OTHER)
product: LOW QUALITY PROTEIN: 5-hydroxytryptamine receptor 1D
translation: MTQYNHSAEFSLHSSANKSLNFTETPLAWDERTLLGLKISLSILLSVITLATILANXFVIITIFLTRKLXTPANYLIGSLAVTDLXCLSLXCPSDIAYTVTHTWAFGQVLCDIWLSSDITCCTASIXHLCVIALDRYWAITDALEYTKRRTAGRAAXMIAVVWMISISISVPPFFWRQVKAHEEIAKCTVNTDQITYTIYSTCGAFYIPTVLLLILYGRIYVAARSRXLKPPSLCGKRFTTAHLITGSAGSSLCSINASLHEXHSLSGGSPIFISHVKIKVADSVLERKRISAARERKATKTLGIILGAFIFCWLPXFVMSLVLPICQDACWFHPILLDXFTWLGYLNSLIXPVIYTAFNEEFKQAFQKLILSKVFILRLSSCVTDPCAIS
SIO_010081: HTR1D
subclass of: SO_0000673
so part of: HTR1D
location: complement(307898..309065)
location: region:307898-309065:-1
so has part: feature:307898-309065:-1:exon

XP_032566120.1
type: Protein
SIO_000068: ncbiprotein

position:307898:-1
position: 307898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309065:-1
position: 309065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307898-309065:-1:exon

LOC116797869
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116797869
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(372024..375680)
location: region:372024-375680:-1
so has part: feature:372024-375680:-1:exon
subclass of: SO_0000011

116797869
type: Gene
SIO_000068: ncbigene

position:372024:-1
position: 372024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375680:-1
position: 375680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372024-375680:-1:exon

LOC116797869
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116797869
product: uncharacterized LOC116797869
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004360769.1
SIO_010081: LOC116797869
subclass of: SO_0000673
so part of: LOC116797869
location: complement(join(372024..373301,373763..375680))
location: region:372024-375680:-1
so has part: feature:373763-375680:-1:exon
so has part: feature:372024-373301:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:373763-375680:-1:exon

position:373763:-1
position: 373763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:372024-373301:-1:exon

position:373301:-1
position: 373301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HNRNPR
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: HNRNPR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(391852..413958)
location: region:391852-413958:-1
so has part: feature:391852-413958:-1:exon
subclass of: SO_0000010

116797868
type: Gene
SIO_000068: ncbigene

position:391852:-1
position: 391852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413958:-1
position: 413958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391852-413958:-1:exon

HNRNPR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: HNRNPR
product: heterogeneous nuclear ribonucleoprotein R
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 1 long SRA read, 18 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032709758.1
SIO_010081: HNRNPR
subclass of: SO_0000673
so part of: HNRNPR
location: complement(join(391852..393145,393329..393449,395495..395645,396313..396518,397546..397681,399770..399946,403840..403953,404636..404743,405155..405273,407572..407740,413840..413958))
location: region:391852-413958:-1
so has part: feature:413840-413958:-1:exon
so has part: feature:407572-407740:-1:exon
so has part: feature:405155-405273:-1:exon
so has part: feature:404636-404743:-1:exon
so has part: feature:403840-403953:-1:exon
so has part: feature:399770-399946:-1:exon
so has part: feature:397546-397681:-1:exon
so has part: feature:396313-396518:-1:exon
so has part: feature:395495-395645:-1:exon
so has part: feature:393329-393449:-1:exon
so has part: feature:391852-393145:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:413840-413958:-1:exon

position:413840:-1
position: 413840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:407572-407740:-1:exon

position:407572:-1
position: 407572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407740:-1
position: 407740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:405155-405273:-1:exon

position:405155:-1
position: 405155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405273:-1
position: 405273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:404636-404743:-1:exon

position:404636:-1
position: 404636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404743:-1
position: 404743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:403840-403953:-1:exon

position:403840:-1
position: 403840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:403953:-1
position: 403953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:399770-399946:-1:exon

position:399770:-1
position: 399770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399946:-1
position: 399946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:397546-397681:-1:exon

position:397546:-1
position: 397546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397681:-1
position: 397681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:396313-396518:-1:exon

position:396313:-1
position: 396313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396518:-1
position: 396518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:395495-395645:-1:exon

position:395495:-1
position: 395495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395645:-1
position: 395645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:393329-393449:-1:exon

position:393329:-1
position: 393329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393449:-1
position: 393449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:391852-393145:-1:exon

position:393145:-1
position: 393145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HNRNPR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: HNRNPR
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein R
translation: MRRRRSARHLPSLLGPELRRAGPAPQHNKMANQVNGNAVQLKEEEEPMDTSSVTHTEHYKTLIEAGLPQKVAERLDEIFQTGLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQESTKGPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDTVYSGVQPGIGTEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCSKDAAQEAVKLCDNYEIRPGKHLGVCISVANNRLLLGQFQRTRLRKNILEEFGKVTEGLVDVILYHQPDDKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMTKVKVLFVRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFEDRGAAVKAMNEMNGKEIEGEEIEIVLAKPPXKKRKERQAARQASRSTAYEDYYYYPPPRMPPPIRGRGRGGRGGYGYPPDYYGYEDYYDDYYGYDYHDYRGGYEDPYYGYDDGYAIRGRGGGGRGGRGAPPPPRGRGAPPPRGXAGYSQRGATHGTTKRSQGGEGVPAQQQRGRGARGARGNRGGHVGCKRKADGYNQPDSKRRQTNNQQNWVSQPIAQQPLQQGGDYAGNYGYNMTTRNLYQEY
SIO_010081: HNRNPR
subclass of: SO_0000673
so part of: HNRNPR
location: complement(join(392551..393145,393329..393449,395495..395645,396313..396518,397546..397681,399770..399946,403840..403953,404636..404743,405155..405273,407572..407740,413840..413914))
location: region:392551-413914:-1
so has part: feature:413840-413914:-1:exon
so has part: feature:407572-407740:-1:exon
so has part: feature:405155-405273:-1:exon
so has part: feature:404636-404743:-1:exon
so has part: feature:403840-403953:-1:exon
so has part: feature:399770-399946:-1:exon
so has part: feature:397546-397681:-1:exon
so has part: feature:396313-396518:-1:exon
so has part: feature:395495-395645:-1:exon
so has part: feature:393329-393449:-1:exon
so has part: feature:392551-393145:-1:exon

XP_032565649.1
type: Protein
SIO_000068: ncbiprotein

position:392551:-1
position: 392551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413914:-1
position: 413914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413840-413914:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:407572-407740:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:405155-405273:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:404636-404743:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:403840-403953:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:399770-399946:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:397546-397681:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:396313-396518:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:395495-395645:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:393329-393449:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:392551-393145:-1:exon

ATP5IF1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: ATP5IF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(420351..421034)
location: region:420351-421034:-1
so has part: feature:420351-421034:-1:exon
subclass of: SO_0000010

116798118
type: Gene
SIO_000068: ncbigene

position:420351:-1
position: 420351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421034:-1
position: 421034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420351-421034:-1:exon

ATP5IF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ATP5IF1
product: ATP synthase inhibitory factor subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032710262.1
SIO_010081: ATP5IF1
subclass of: SO_0000673
so part of: ATP5IF1
location: complement(join(420351..420636,420726..420838,420936..421034))
location: region:420351-421034:-1
so has part: feature:420936-421034:-1:exon
so has part: feature:420726-420838:-1:exon
so has part: feature:420351-420636:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:420936-421034:-1:exon

position:420936:-1
position: 420936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:420726-420838:-1:exon

position:420726:-1
position: 420726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420838:-1
position: 420838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:420351-420636:-1:exon

position:420636:-1
position: 420636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP5IF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ATP5IF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATPase inhibitor, mitochondrial
translation: MAAVAAVRGGLGLRGALLAQQQRWSSGSGADQLGELGKGAGKGGGGGGSIREAGGAFGKKQAAEEERYFREKEREQLSALRKHHEEEIHHHQKEIERLQKEIERHKHKIKQLKDD
SIO_010081: ATP5IF1
subclass of: SO_0000673
so part of: ATP5IF1
location: complement(join(420498..420636,420726..420838,420936..421031))
location: region:420498-421031:-1
so has part: feature:420936-421031:-1:exon
so has part: feature:420726-420838:-1:exon
so has part: feature:420498-420636:-1:exon

XP_032566153.1
type: Protein
SIO_000068: ncbiprotein

position:420498:-1
position: 420498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421031:-1
position: 421031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420936-421031:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420726-420838:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:420498-420636:-1:exon

DNAJC8
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: DNAJC8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 421206..431553
location: region:421206-431553:1
so has part: feature:421206-431553:1:exon
subclass of: SO_0000010

116798068
type: Gene
SIO_000068: ncbigene

position:421206:1
position: 421206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431553:1
position: 431553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421206-431553:1:exon

DNAJC8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: DNAJC8
product: DnaJ heat shock protein family (Hsp40) member C8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 36 ESTs, 8 long SRA reads, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_032710158.1
SIO_010081: DNAJC8
subclass of: SO_0000673
so part of: DNAJC8
location: join(421206..421305,422249..422350,423994..424050,425641..425707,426348..426442,427235..427306,428453..428544,429489..429563,430770..431553)
location: region:421206-431553:1
so has part: feature:421206-421305:1:exon
so has part: feature:422249-422350:1:exon
so has part: feature:423994-424050:1:exon
so has part: feature:425641-425707:1:exon
so has part: feature:426348-426442:1:exon
so has part: feature:427235-427306:1:exon
so has part: feature:428453-428544:1:exon
so has part: feature:429489-429563:1:exon
so has part: feature:430770-431553:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:421206-421305:1:exon

position:421305:1
position: 421305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:422249-422350:1:exon

position:422249:1
position: 422249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422350:1
position: 422350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:423994-424050:1:exon

position:423994:1
position: 423994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424050:1
position: 424050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:425641-425707:1:exon

position:425641:1
position: 425641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425707:1
position: 425707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:426348-426442:1:exon

position:426348:1
position: 426348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426442:1
position: 426442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:427235-427306:1:exon

position:427235:1
position: 427235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427306:1
position: 427306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:428453-428544:1:exon

position:428453:1
position: 428453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428544:1
position: 428544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:429489-429563:1:exon

position:429489:1
position: 429489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429563:1
position: 429563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:430770-431553:1:exon

position:430770:1
position: 430770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DNAJC8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: DNAJC8
product: DnaJ heat shock protein family (Hsp40) member C8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 2 long SRA reads, 8 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032710159.1
SIO_010081: DNAJC8
subclass of: SO_0000673
so part of: DNAJC8
location: join(421223..421305,422249..422350,423994..424050,425641..425707,426348..426442,427235..427306,428453..428555,429493..429563,430770..431553)
location: region:421223-431553:1
so has part: feature:421223-421305:1:exon
so has part: feature:422249-422350:1:exon
so has part: feature:423994-424050:1:exon
so has part: feature:425641-425707:1:exon
so has part: feature:426348-426442:1:exon
so has part: feature:427235-427306:1:exon
so has part: feature:428453-428555:1:exon
so has part: feature:429493-429563:1:exon
so has part: feature:430770-431553:1:exon

position:421223:1
position: 421223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421223-421305:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:422249-422350:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:423994-424050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:425641-425707:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:426348-426442:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:427235-427306:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:428453-428555:1:exon

position:428555:1
position: 428555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:429493-429563:1:exon

position:429493:1
position: 429493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:430770-431553:1:exon

DNAJC8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: DNAJC8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily C member 8 isoform X2
translation: MAAAGPGAGAAEDAFLTFYNEVKQIEKRDSVLTSKNQIDRLTRPGSSYFNLNPFEVLQMDPEATDEEIKKRFRQLSILVHPDKNQDDADRAQKAFEAVDKAYKLLLDQEQKKRALDVIQAGKEYVEHTVKEKKKQLKKDGKPPTVEEDDPEVFKQAVYKQTMKLFAELEIKRKEREAKEMHERYKQSQREEEIEAQEKAKREREWQKNFEESRDGRVDSWRNFQANTKGKKEKKNRTFLRPPKVKMEQRE
SIO_010081: DNAJC8
subclass of: SO_0000673
so part of: DNAJC8
location: join(421243..421305,422249..422350,423994..424050,425641..425707,426348..426442,427235..427306,428453..428555,429493..429563,430770..430892)
location: region:421243-430892:1
so has part: feature:421243-421305:1:exon
so has part: feature:422249-422350:1:exon
so has part: feature:423994-424050:1:exon
so has part: feature:425641-425707:1:exon
so has part: feature:426348-426442:1:exon
so has part: feature:427235-427306:1:exon
so has part: feature:428453-428555:1:exon
so has part: feature:429493-429563:1:exon
so has part: feature:430770-430892:1:exon

XP_032566050.1
type: Protein
SIO_000068: ncbiprotein

position:421243:1
position: 421243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430892:1
position: 430892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421243-421305:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:422249-422350:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:423994-424050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:425641-425707:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:426348-426442:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:427235-427306:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:428453-428555:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:429493-429563:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:430770-430892:1:exon

DNAJC8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: DNAJC8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily C member 8 isoform X1
translation: MAAAGPGAGAAEDAFLTFYNEVKQIEKRDSVLTSKNQIDRLTRPGSSYFNLNPFEVLQMDPEATDEEIKKRFRQLSILVHPDKNQDDADRAQKAFEAVDKAYKLLLDQEQKKRALDVIQAGKEYVEHTVKEKKKQLKKDGKPPTVEEDDPEVFKQAVYKQTMKLFAELEIKRKEREAKEMHERKRRGKRKLKHKRKLNENENGRRTLRKVGMVV
SIO_010081: DNAJC8
subclass of: SO_0000673
so part of: DNAJC8
location: join(421243..421305,422249..422350,423994..424050,425641..425707,426348..426442,427235..427306,428453..428544,429489..429563,430770..430791)
location: region:421243-430791:1
so has part: feature:421243-421305:1:exon
so has part: feature:422249-422350:1:exon
so has part: feature:423994-424050:1:exon
so has part: feature:425641-425707:1:exon
so has part: feature:426348-426442:1:exon
so has part: feature:427235-427306:1:exon
so has part: feature:428453-428544:1:exon
so has part: feature:429489-429563:1:exon
so has part: feature:430770-430791:1:exon

XP_032566049.1
type: Protein
SIO_000068: ncbiprotein

position:430791:1
position: 430791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421243-421305:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:422249-422350:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:423994-424050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:425641-425707:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:426348-426442:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:427235-427306:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:428453-428544:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:429489-429563:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:430770-430791:1:exon

PTAFR
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: PTAFR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 440666..450111
location: region:440666-450111:1
so has part: feature:440666-450111:1:exon
subclass of: SO_0000010

116798114
type: Gene
SIO_000068: ncbigene

position:440666:1
position: 440666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450111:1
position: 450111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440666-450111:1:exon

PTAFR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PTAFR
product: platelet activating factor receptor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032710256.1
SIO_010081: PTAFR
subclass of: SO_0000673
so part of: PTAFR
location: join(440666..440945,441703..441886,446570..450111)
location: region:440666-450111:1
so has part: feature:440666-440945:1:exon
so has part: feature:441703-441886:1:exon
so has part: feature:446570-450111:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:440666-440945:1:exon

position:440945:1
position: 440945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:441703-441886:1:exon

position:441703:1
position: 441703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441886:1
position: 441886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:446570-450111:1:exon

position:446570:1
position: 446570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTAFR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PTAFR
product: platelet activating factor receptor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032710258.1
SIO_010081: PTAFR
subclass of: SO_0000673
so part of: PTAFR
location: join(440666..440911,441703..441886,446570..450111)
location: region:440666-450111:1
so has part: feature:440666-440911:1:exon
so has part: feature:441703-441886:1:exon
so has part: feature:446570-450111:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:440666-440911:1:exon

position:440911:1
position: 440911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:441703-441886:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:446570-450111:1:exon

PTAFR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PTAFR
product: platelet activating factor receptor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032710257.1
SIO_010081: PTAFR
subclass of: SO_0000673
so part of: PTAFR
location: join(440980..441049,441703..441886,446570..450111)
location: region:440980-450111:1
so has part: feature:440980-441049:1:exon
so has part: feature:441703-441886:1:exon
so has part: feature:446570-450111:1:exon

position:440980:1
position: 440980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440980-441049:1:exon

position:441049:1
position: 441049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:441703-441886:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:446570-450111:1:exon

PTAFR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PTAFR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: platelet-activating factor receptor
translation: MSGKGKGGVEGSADSFILCHIDSEFRYNLFTVFYSIIFILGFVANCYVLWIFSHIYPTKKLNEIKIFMINLTVADLLFLVTMPMWIVYYHHRGDWIMPEFLCNVAGCLFFVNTYSSVAFLMVITYNRYQAVTNPIKASQLTTQRRGIYLSAAIWIVIVGSSLYYLFDNNTNKEEINSKNFTRCFERYDTSSGVSAVLAIHIIICVLFYIIFLFILGWNIVIIRTLFSKSVHPRKSAHVKQRALWMVCTVLAVFIISFVPHHIVDLPWTLTVLEQWKKENCQLRQQLNDAHQVTLCLLSTNCVLDPIIYCFLTKKFQKHLSENLKSMKGSRKCSRQTTDTVIEGTIHQEDAIRIC
SIO_010081: PTAFR
subclass of: SO_0000673
so part of: PTAFR
location: 446628..447692
location: region:446628-447692:1
so has part: feature:446628-447692:1:exon

XP_032566147.1
type: Protein
SIO_000068: ncbiprotein

position:446628:1
position: 446628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447692:1
position: 447692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446628-447692:1:exon

PTAFR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PTAFR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: platelet-activating factor receptor
translation: MSGKGKGGVEGSADSFILCHIDSEFRYNLFTVFYSIIFILGFVANCYVLWIFSHIYPTKKLNEIKIFMINLTVADLLFLVTMPMWIVYYHHRGDWIMPEFLCNVAGCLFFVNTYSSVAFLMVITYNRYQAVTNPIKASQLTTQRRGIYLSAAIWIVIVGSSLYYLFDNNTNKEEINSKNFTRCFERYDTSSGVSAVLAIHIIICVLFYIIFLFILGWNIVIIRTLFSKSVHPRKSAHVKQRALWMVCTVLAVFIISFVPHHIVDLPWTLTVLEQWKKENCQLRQQLNDAHQVTLCLLSTNCVLDPIIYCFLTKKFQKHLSENLKSMKGSRKCSRQTTDTVIEGTIHQEDAIRIC
SIO_010081: PTAFR
subclass of: SO_0000673
so part of: PTAFR
location: 446628..447692
location: region:446628-447692:1
so has part: feature:446628-447692:1:exon

XP_032566148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:446628-447692:1:exon

PTAFR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PTAFR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: platelet-activating factor receptor
translation: MSGKGKGGVEGSADSFILCHIDSEFRYNLFTVFYSIIFILGFVANCYVLWIFSHIYPTKKLNEIKIFMINLTVADLLFLVTMPMWIVYYHHRGDWIMPEFLCNVAGCLFFVNTYSSVAFLMVITYNRYQAVTNPIKASQLTTQRRGIYLSAAIWIVIVGSSLYYLFDNNTNKEEINSKNFTRCFERYDTSSGVSAVLAIHIIICVLFYIIFLFILGWNIVIIRTLFSKSVHPRKSAHVKQRALWMVCTVLAVFIISFVPHHIVDLPWTLTVLEQWKKENCQLRQQLNDAHQVTLCLLSTNCVLDPIIYCFLTKKFQKHLSENLKSMKGSRKCSRQTTDTVIEGTIHQEDAIRIC
SIO_010081: PTAFR
subclass of: SO_0000673
so part of: PTAFR
location: 446628..447692
location: region:446628-447692:1
so has part: feature:446628-447692:1:exon

XP_032566149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:446628-447692:1:exon

EYA3
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: EYA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 451498..507202
location: region:451498-507202:1
so has part: feature:451498-507202:1:exon
subclass of: SO_0000010

116797913
type: Gene
SIO_000068: ncbigene

position:451498:1
position: 451498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507202:1
position: 507202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451498-507202:1:exon

EYA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: EYA3
product: EYA transcriptional coactivator and phosphatase 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 20 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032709863.1
SIO_010081: EYA3
subclass of: SO_0000673
so part of: EYA3
location: join(451498..451576,471358..471452,475285..475328,477484..477563,480074..480140,480886..481028,486195..486332,490985..491067,492523..492703,495158..495296,497345..497428,498020..498109,499471..499529,500398..500555,502102..502216,502569..502690,502915..503015,503869..507202)
location: region:451498-507202:1
so has part: feature:451498-451576:1:exon
so has part: feature:471358-471452:1:exon
so has part: feature:475285-475328:1:exon
so has part: feature:477484-477563:1:exon
so has part: feature:480074-480140:1:exon
so has part: feature:480886-481028:1:exon
so has part: feature:486195-486332:1:exon
so has part: feature:490985-491067:1:exon
so has part: feature:492523-492703:1:exon
so has part: feature:495158-495296:1:exon
so has part: feature:497345-497428:1:exon
so has part: feature:498020-498109:1:exon
so has part: feature:499471-499529:1:exon
so has part: feature:500398-500555:1:exon
so has part: feature:502102-502216:1:exon
so has part: feature:502569-502690:1:exon
so has part: feature:502915-503015:1:exon
so has part: feature:503869-507202:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:451498-451576:1:exon

position:451576:1
position: 451576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:471358-471452:1:exon

position:471358:1
position: 471358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471452:1
position: 471452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:475285-475328:1:exon

position:475285:1
position: 475285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475328:1
position: 475328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:477484-477563:1:exon

position:477484:1
position: 477484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477563:1
position: 477563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:480074-480140:1:exon

position:480074:1
position: 480074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480140:1
position: 480140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:480886-481028:1:exon

position:480886:1
position: 480886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481028:1
position: 481028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:486195-486332:1:exon

position:486195:1
position: 486195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486332:1
position: 486332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:490985-491067:1:exon

position:490985:1
position: 490985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491067:1
position: 491067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:492523-492703:1:exon

position:492523:1
position: 492523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492703:1
position: 492703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:495158-495296:1:exon

position:495158:1
position: 495158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495296:1
position: 495296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:497345-497428:1:exon

position:497345:1
position: 497345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497428:1
position: 497428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:498020-498109:1:exon

position:498020:1
position: 498020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498109:1
position: 498109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:499471-499529:1:exon

position:499471:1
position: 499471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499529:1
position: 499529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:500398-500555:1:exon

position:500398:1
position: 500398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500555:1
position: 500555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:502102-502216:1:exon

position:502102:1
position: 502102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502216:1
position: 502216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:502569-502690:1:exon

position:502569:1
position: 502569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502690:1
position: 502690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:502915-503015:1:exon

position:502915:1
position: 502915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503015:1
position: 503015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:503869-507202:1:exon

position:503869:1
position: 503869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EYA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: EYA3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: eyes absent homolog 3
translation: MEEPQDLPEQPVKKAKMQESREQSLSHVSNTEISDQKPEPSSLGSNLPMSSEIMTCTDYIPRSSNDYTSQIYSAKPYAHILSVPISETMSPYPGQPQYQALQQSQPYTIYPQTTQTYGLPPFGALWPGMKPESGLIQTPSTSQHSVLTCTTGLTTSQPSPAHYSYSIEASTTNASPVSTSSTVVNISTSAVASISQEYPTYTILGQSQYQTCYPSSGFGVVPPADSSTDSLALATTTYPAEKATAAPARAAQRPPSGDASTSPSLSRATASKELDEQARKNIPXENRGKRKADTSSSQDSELERVFLWDLDETIIIFHSLLXGSYAQKYGKDPTLVIGSGLSMEEMIFEVADTHLFFNDLEECDQVHIEDVASDDNGQDLSNYNFSTDGFSGSGSNTNHSSSVGVQGVDWMRKLAFRYRRVREIYNKYKADVGGLLSPQKREALQRLRTDIEVLTDSWLETALKSLLLIQSRKNCENILITTTQLMPALAKVLLYGLGEVFPIENIYSATKIGKESCFERIVSRFGKKVTYVVIGDGRDEEVAAKQHNMPFWRITNHADLVSLHQALELDFL
SIO_010081: EYA3
subclass of: SO_0000673
so part of: EYA3
location: join(471420..471452,475285..475328,477484..477563,480074..480140,480886..481028,486195..486332,490985..491067,492523..492703,495158..495296,497345..497428,498020..498109,499471..499529,500398..500555,502102..502216,502569..502690,502915..503015,503869..503949)
location: region:471420-503949:1
so has part: feature:471420-471452:1:exon
so has part: feature:475285-475328:1:exon
so has part: feature:477484-477563:1:exon
so has part: feature:480074-480140:1:exon
so has part: feature:480886-481028:1:exon
so has part: feature:486195-486332:1:exon
so has part: feature:490985-491067:1:exon
so has part: feature:492523-492703:1:exon
so has part: feature:495158-495296:1:exon
so has part: feature:497345-497428:1:exon
so has part: feature:498020-498109:1:exon
so has part: feature:499471-499529:1:exon
so has part: feature:500398-500555:1:exon
so has part: feature:502102-502216:1:exon
so has part: feature:502569-502690:1:exon
so has part: feature:502915-503015:1:exon
so has part: feature:503869-503949:1:exon

XP_032565754.1
type: Protein
SIO_000068: ncbiprotein

position:471420:1
position: 471420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503949:1
position: 503949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471420-471452:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:475285-475328:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:477484-477563:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:480074-480140:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:480886-481028:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:486195-486332:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:490985-491067:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:492523-492703:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:495158-495296:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:497345-497428:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:498020-498109:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:499471-499529:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:500398-500555:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:502102-502216:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:502569-502690:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:502915-503015:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:503869-503949:1:exon

XKR8
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: XKR8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(506733..510884)
location: region:506733-510884:-1
so has part: feature:506733-510884:-1:exon
subclass of: SO_0000010

116797914
type: Gene
SIO_000068: ncbigene

position:506733:-1
position: 506733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510884:-1
position: 510884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506733-510884:-1:exon

XKR8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: XKR8
product: XK related 8
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032709864.1
SIO_010081: XKR8
subclass of: SO_0000673
so part of: XKR8
location: complement(join(506733..509213,509775..509971,510577..510884))
location: region:506733-510884:-1
so has part: feature:510577-510884:-1:exon
so has part: feature:509775-509971:-1:exon
so has part: feature:506733-509213:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:510577-510884:-1:exon

position:510577:-1
position: 510577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:509775-509971:-1:exon

position:509775:-1
position: 509775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509971:-1
position: 509971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:506733-509213:-1:exon

position:509213:-1
position: 509213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

XKR8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: XKR8
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: XK-related protein 8
translation: MSPRVAPPRFGPLQLALAAAGTAAAALDLFMDGWVAAEYVWRGQPGWAALSLSLLAAASAAAQACSWLWLRSDPPALRPAVPAALLTALHLLQLGFLFRCLHALKVGWKVCWAKAEEEEEQRHMAFLSHDISMLRLFETFLENTPQLTLLLYIILQTNKAEISQGLGIGTALLCVSWSLLDYHQSLRSFLRDKYELSRGSSIIYFLWNLFLICPHHPAVALFSLLWPYGVAVHFPLVWLAMFLWVSLQGTNFMESPGPEQLYRAMVAVILYFSWFNVAQGRTLHRSIIYHSFILVDSTLLALSWLWGQAPSEDHWYLLPVVSAALPCYLLGLGLRVTYYKWLHPNRQVQQEGGYDEVDADGGSDGLEFHSFSEADLVNRRMQCLAQIQFPVSQLAQQRFLNGAAALESAA
SIO_010081: XKR8
subclass of: SO_0000673
so part of: XKR8
location: complement(join(508473..509213,509775..509971,510577..510872))
location: region:508473-510872:-1
so has part: feature:510577-510872:-1:exon
so has part: feature:509775-509971:-1:exon
so has part: feature:508473-509213:-1:exon

XP_032565755.1
type: Protein
SIO_000068: ncbiprotein

position:508473:-1
position: 508473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510872:-1
position: 510872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510577-510872:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:509775-509971:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:508473-509213:-1:exon

RPA2
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: RPA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(512860..517534)
location: region:512860-517534:-1
so has part: feature:512860-517534:-1:exon
subclass of: SO_0000010

116798103
type: Gene
SIO_000068: ncbigene

position:512860:-1
position: 512860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517534:-1
position: 517534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512860-517534:-1:exon

RPA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: RPA2
product: replication protein A2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 4 long SRA reads, 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032710239.1
SIO_010081: RPA2
subclass of: SO_0000673
so part of: RPA2
location: complement(join(512860..513462,514145..514239,514418..514528,514800..514913,516074..516148,516812..516925,516996..517097,517180..517292,517467..517534))
location: region:512860-517534:-1
so has part: feature:517467-517534:-1:exon
so has part: feature:517180-517292:-1:exon
so has part: feature:516996-517097:-1:exon
so has part: feature:516812-516925:-1:exon
so has part: feature:516074-516148:-1:exon
so has part: feature:514800-514913:-1:exon
so has part: feature:514418-514528:-1:exon
so has part: feature:514145-514239:-1:exon
so has part: feature:512860-513462:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:517467-517534:-1:exon

position:517467:-1
position: 517467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:517180-517292:-1:exon

position:517180:-1
position: 517180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517292:-1
position: 517292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:516996-517097:-1:exon

position:516996:-1
position: 516996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517097:-1
position: 517097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:516812-516925:-1:exon

position:516812:-1
position: 516812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516925:-1
position: 516925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:516074-516148:-1:exon

position:516074:-1
position: 516074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516148:-1
position: 516148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:514800-514913:-1:exon

position:514800:-1
position: 514800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:514913:-1
position: 514913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:514418-514528:-1:exon

position:514418:-1
position: 514418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:514528:-1
position: 514528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:514145-514239:-1:exon

position:514145:-1
position: 514145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:514239:-1
position: 514239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:512860-513462:-1:exon

position:513462:-1
position: 513462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: RPA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: replication protein A 32 kDa subunit
translation: MWSGHGNFDGGYGTVGGAGPPGGYLQSPGGFGSPAGAQAEKKQRSRSQNIVPCTVSQLLAAEQVDETFRICDVEISQVTVVGIVRHAEKAPTNILYKVDDMTAAPMDVRQWVDTDEAGGENVVVPPGTYVKVAGHLRSFQNKKSLVAFKIMPLENMNEFTTHILEIVNAHMILRKNLMSASSAPPSFPSAGISDRGGYGGGGSLPVNGLTAQQSQVLNLIKSCPVPEGMSLQELKLQLRSVSMSTIKQIVEFLSSEGHIYSTVDDDHYKSTDAE
SIO_010081: RPA2
subclass of: SO_0000673
so part of: RPA2
location: complement(join(513378..513462,514145..514239,514418..514528,514800..514913,516074..516148,516812..516925,516996..517097,517180..517292,517467..517482))
location: region:513378-517482:-1
so has part: feature:517467-517482:-1:exon
so has part: feature:517180-517292:-1:exon
so has part: feature:516996-517097:-1:exon
so has part: feature:516812-516925:-1:exon
so has part: feature:516074-516148:-1:exon
so has part: feature:514800-514913:-1:exon
so has part: feature:514418-514528:-1:exon
so has part: feature:514145-514239:-1:exon
so has part: feature:513378-513462:-1:exon

XP_032566130.1
type: Protein
SIO_000068: ncbiprotein

position:513378:-1
position: 513378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517482:-1
position: 517482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517467-517482:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:517180-517292:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:516996-517097:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:516812-516925:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:516074-516148:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:514800-514913:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:514418-514528:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:514145-514239:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:513378-513462:-1:exon

SMPDL3B
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: SMPDL3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 517755..524145
location: region:517755-524145:1
so has part: feature:517755-524145:1:exon
subclass of: SO_0000010

116798116
type: Gene
SIO_000068: ncbigene

position:517755:1
position: 517755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524145:1
position: 524145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517755-524145:1:exon

SMPDL3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SMPDL3B
product: sphingomyelin phosphodiesterase acid like 3B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032710260.1
SIO_010081: SMPDL3B
subclass of: SO_0000673
so part of: SMPDL3B
location: join(517755..518129,519589..519686,520191..520334,520962..521134,521265..521445,522027..522160,523202..524145)
location: region:517755-524145:1
so has part: feature:517755-518129:1:exon
so has part: feature:519589-519686:1:exon
so has part: feature:520191-520334:1:exon
so has part: feature:520962-521134:1:exon
so has part: feature:521265-521445:1:exon
so has part: feature:522027-522160:1:exon
so has part: feature:523202-524145:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:517755-518129:1:exon

position:518129:1
position: 518129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:519589-519686:1:exon

position:519589:1
position: 519589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519686:1
position: 519686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:520191-520334:1:exon

position:520191:1
position: 520191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520334:1
position: 520334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:520962-521134:1:exon

position:520962:1
position: 520962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521134:1
position: 521134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:521265-521445:1:exon

position:521265:1
position: 521265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521445:1
position: 521445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:522027-522160:1:exon

position:522027:1
position: 522027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522160:1
position: 522160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:523202-524145:1:exon

position:523202:1
position: 523202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SMPDL3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SMPDL3B
product: sphingomyelin phosphodiesterase acid like 3B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032710261.1
SIO_010081: SMPDL3B
subclass of: SO_0000673
so part of: SMPDL3B
location: join(517755..517958,519589..519686,520191..520334,520962..521134,521265..521445,522027..522160,523202..524145)
location: region:517755-524145:1
so has part: feature:517755-517958:1:exon
so has part: feature:519589-519686:1:exon
so has part: feature:520191-520334:1:exon
so has part: feature:520962-521134:1:exon
so has part: feature:521265-521445:1:exon
so has part: feature:522027-522160:1:exon
so has part: feature:523202-524145:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:517755-517958:1:exon

position:517958:1
position: 517958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:519589-519686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:520191-520334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:520962-521134:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:521265-521445:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:522027-522160:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:523202-524145:1:exon

SMPDL3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SMPDL3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acid sphingomyelinase-like phosphodiesterase 3b isoform X1
translation: MQPLAQSVALLLLCPLAAALPGARGGRGRFWHLTDLHWDPEYEAAAAAGRPCPSGSARSGPAGPWGSYLCDAPWALLRSAVRAMREILPAPDFVLWTGDDTPHVPNEQLGEEKVLHIIANLTSLIKETFPGTKVYAAMGNHDFHPKNQFPGKEHRIYNQTAELWRPWLSDASLPLFRAGAFYNEKLPSPGTRGRMVVLNTNLYYDQNDETAADEDPGGQFQWLEETLTNASRADEMVYLVGHVPPGFFEKKRGKAWFRRGFNERYLGIVQRHHRVIAAQFFGHHHTDSFRMFYSDTGSPINVMFLAPGVTPWKTTLPGVNNGANNPGIRVISYDLDTLQVLDMVTYYLNLTRANTMASPGEAEFPVWEAEYSLTEAFQVPDGSARSMQTVLERISGDPHYLQSYYEFNSARYDLAPCKQECRVDHLCAIREVDFTKYDECVKTSSAASAASSIWLLVFCVFLGLLSPQRVP
SIO_010081: SMPDL3B
subclass of: SO_0000673
so part of: SMPDL3B
location: join(517837..518129,519589..519686,520191..520334,520962..521134,521265..521445,522027..522160,523202..523594)
location: region:517837-523594:1
so has part: feature:517837-518129:1:exon
so has part: feature:519589-519686:1:exon
so has part: feature:520191-520334:1:exon
so has part: feature:520962-521134:1:exon
so has part: feature:521265-521445:1:exon
so has part: feature:522027-522160:1:exon
so has part: feature:523202-523594:1:exon

XP_032566151.1
type: Protein
SIO_000068: ncbiprotein

position:517837:1
position: 517837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523594:1
position: 523594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517837-518129:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:519589-519686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:520191-520334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:520962-521134:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:521265-521445:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:522027-522160:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:523202-523594:1:exon

SMPDL3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SMPDL3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acid sphingomyelinase-like phosphodiesterase 3b isoform X2
translation: MQPLAQSVALLLLCPLAAALPGARGGRGRFWHLTDLHWDPEDDTPHVPNEQLGEEKVLHIIANLTSLIKETFPGTKVYAAMGNHDFHPKNQFPGKEHRIYNQTAELWRPWLSDASLPLFRAGAFYNEKLPSPGTRGRMVVLNTNLYYDQNDETAADEDPGGQFQWLEETLTNASRADEMVYLVGHVPPGFFEKKRGKAWFRRGFNERYLGIVQRHHRVIAAQFFGHHHTDSFRMFYSDTGSPINVMFLAPGVTPWKTTLPGVNNGANNPGIRVISYDLDTLQVLDMVTYYLNLTRANTMASPGEAEFPVWEAEYSLTEAFQVPDGSARSMQTVLERISGDPHYLQSYYEFNSARYDLAPCKQECRVDHLCAIREVDFTKYDECVKTSSAASAASSIWLLVFCVFLGLLSPQRVP
SIO_010081: SMPDL3B
subclass of: SO_0000673
so part of: SMPDL3B
location: join(517837..517958,519589..519686,520191..520334,520962..521134,521265..521445,522027..522160,523202..523594)
location: region:517837-523594:1
so has part: feature:517837-517958:1:exon
so has part: feature:519589-519686:1:exon
so has part: feature:520191-520334:1:exon
so has part: feature:520962-521134:1:exon
so has part: feature:521265-521445:1:exon
so has part: feature:522027-522160:1:exon
so has part: feature:523202-523594:1:exon

XP_032566152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:517837-517958:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:519589-519686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:520191-520334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:520962-521134:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:521265-521445:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:522027-522160:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:523202-523594:1:exon

PPP1R8
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: PPP1R8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(526910..553621)
location: region:526910-553621:-1
so has part: feature:526910-553621:-1:exon
subclass of: SO_0000010

116797900
type: Gene
SIO_000068: ncbigene

position:526910:-1
position: 526910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553621:-1
position: 553621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526910-553621:-1:exon

PPP1R8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PPP1R8
product: protein phosphatase 1 regulatory subunit 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 2 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032709836.1
SIO_010081: PPP1R8
subclass of: SO_0000673
so part of: PPP1R8
location: complement(join(526910..529380,530475..530539,531689..531833,536524..536744,537358..537511,542805..542864,553271..553621))
location: region:526910-553621:-1
so has part: feature:553271-553621:-1:exon
so has part: feature:542805-542864:-1:exon
so has part: feature:537358-537511:-1:exon
so has part: feature:536524-536744:-1:exon
so has part: feature:531689-531833:-1:exon
so has part: feature:530475-530539:-1:exon
so has part: feature:526910-529380:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:553271-553621:-1:exon

position:553271:-1
position: 553271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:542805-542864:-1:exon

position:542805:-1
position: 542805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542864:-1
position: 542864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:537358-537511:-1:exon

position:537358:-1
position: 537358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537511:-1
position: 537511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:536524-536744:-1:exon

position:536524:-1
position: 536524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536744:-1
position: 536744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:531689-531833:-1:exon

position:531689:-1
position: 531689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531833:-1
position: 531833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:530475-530539:-1:exon

position:530475:-1
position: 530475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530539:-1
position: 530539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:526910-529380:-1:exon

position:529380:-1
position: 529380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPP1R8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PPP1R8
product: protein phosphatase 1 regulatory subunit 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 3 long SRA reads, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032709837.1
SIO_010081: PPP1R8
subclass of: SO_0000673
so part of: PPP1R8
location: complement(join(526910..529380,530475..530539,531689..531833,536524..536744,537358..537511,542805..542864,552526..552654))
location: region:526910-552654:-1
so has part: feature:552526-552654:-1:exon
so has part: feature:542805-542864:-1:exon
so has part: feature:537358-537511:-1:exon
so has part: feature:536524-536744:-1:exon
so has part: feature:531689-531833:-1:exon
so has part: feature:530475-530539:-1:exon
so has part: feature:526910-529380:-1:exon

position:552654:-1
position: 552654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552526-552654:-1:exon

position:552526:-1
position: 552526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:542805-542864:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537358-537511:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536524-536744:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:531689-531833:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:530475-530539:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:526910-529380:-1:exon

PPP1R8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PPP1R8
product: protein phosphatase 1 regulatory subunit 8, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 2 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032709838.1
SIO_010081: PPP1R8
subclass of: SO_0000673
so part of: PPP1R8
location: complement(join(526910..529380,530475..530539,531689..531833,536524..536744,542805..542864))
location: region:526910-542864:-1
so has part: feature:542805-542864:-1:exon
so has part: feature:536524-536744:-1:exon
so has part: feature:531689-531833:-1:exon
so has part: feature:530475-530539:-1:exon
so has part: feature:526910-529380:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:542805-542864:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:536524-536744:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:531689-531833:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:530475-530539:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:526910-529380:-1:exon

PPP1R8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PPP1R8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear inhibitor of protein phosphatase 1 isoform X1
translation: MRALSSSPSPKGSIFVGSILPLACFNPPETGIADTGPGFWGRGCCNCLNCLLSLHIIDRSSTTAAEPFVTVLTEVPGCENSPSAPPGWGCSAVCPARTRVFRRSEARRTHSGGRKTTTWLTPGCSQRRQLIEKLIIDEKKYYLFGRNPDLCDFTIDHQSCSRVHAALVYHKHLKRVFLIDLNSTHGTFLGHIRLEAHKPQQIPIDSTVSFGASTRAYTLREKPQTLPSAVKGDEKMGGEDEELKGLLGLPEEETELDNLTEFNTAHNKRISTLTIEEGNLDIQRPKRKRKNSRVTFSDDDEIINPEDVDPSVGRFRNMVQTAVVPVKKKRLENAGSLPPEDSTSRRMQNFPYSGGLYGGLPPTHSEAGPQSHGVHGTALIGGLPMPYPNLAPDVDLTPVVPSTVNMNPAPNPAVFNPEAVNEPKKKKYAKEAWPGKKPTPSLLI
SIO_010081: PPP1R8
subclass of: SO_0000673
so part of: PPP1R8
location: complement(join(529027..529380,530475..530539,531689..531833,536524..536744,537358..537511,542805..542864,553271..553606))
location: region:529027-553606:-1
so has part: feature:553271-553606:-1:exon
so has part: feature:542805-542864:-1:exon
so has part: feature:537358-537511:-1:exon
so has part: feature:536524-536744:-1:exon
so has part: feature:531689-531833:-1:exon
so has part: feature:530475-530539:-1:exon
so has part: feature:529027-529380:-1:exon

XP_032565727.1
type: Protein
SIO_000068: ncbiprotein

position:529027:-1
position: 529027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553606:-1
position: 553606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553271-553606:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:542805-542864:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537358-537511:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536524-536744:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:531689-531833:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:530475-530539:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:529027-529380:-1:exon

PPP1R8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PPP1R8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear inhibitor of protein phosphatase 1 isoform X2
translation: MGQSQDGGGRGPGGRRRPVRVPELGRKTTTWLTPGCSQRRQLIEKLIIDEKKYYLFGRNPDLCDFTIDHQSCSRVHAALVYHKHLKRVFLIDLNSTHGTFLGHIRLEAHKPQQIPIDSTVSFGASTRAYTLREKPQTLPSAVKGDEKMGGEDEELKGLLGLPEEETELDNLTEFNTAHNKRISTLTIEEGNLDIQRPKRKRKNSRVTFSDDDEIINPEDVDPSVGRFRNMVQTAVVPVKKKRLENAGSLPPEDSTSRRMQNFPYSGGLYGGLPPTHSEAGPQSHGVHGTALIGGLPMPYPNLAPDVDLTPVVPSTVNMNPAPNPAVFNPEAVNEPKKKKYAKEAWPGKKPTPSLLI
SIO_010081: PPP1R8
subclass of: SO_0000673
so part of: PPP1R8
location: complement(join(529027..529380,530475..530539,531689..531833,536524..536744,537358..537511,542805..542864,552526..552597))
location: region:529027-552597:-1
so has part: feature:552526-552597:-1:exon
so has part: feature:542805-542864:-1:exon
so has part: feature:537358-537511:-1:exon
so has part: feature:536524-536744:-1:exon
so has part: feature:531689-531833:-1:exon
so has part: feature:530475-530539:-1:exon
so has part: feature:529027-529380:-1:exon

XP_032565728.1
type: Protein
SIO_000068: ncbiprotein

position:552597:-1
position: 552597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552526-552597:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:542805-542864:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537358-537511:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536524-536744:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:531689-531833:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:530475-530539:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:529027-529380:-1:exon

PPP1R8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PPP1R8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear inhibitor of protein phosphatase 1 isoform X3
translation: MGGEDEELKGLLGLPEEETELDNLTEFNTAHNKRISTLTIEEGNLDIQRPKRKRKNSRVTFSDDDEIINPEDVDPSVGRFRNMVQTAVVPVKKKRLENAGSLPPEDSTSRRMQNFPYSGGLYGGLPPTHSEAGPQSHGVHGTALIGGLPMPYPNLAPDVDLTPVVPSTVNMNPAPNPAVFNPEAVNEPKKKKYAKEAWPGKKPTPSLLI
SIO_010081: PPP1R8
subclass of: SO_0000673
so part of: PPP1R8
location: complement(join(529027..529380,530475..530539,531689..531833,536524..536589))
location: region:529027-536589:-1
so has part: feature:536524-536589:-1:exon
so has part: feature:531689-531833:-1:exon
so has part: feature:530475-530539:-1:exon
so has part: feature:529027-529380:-1:exon

XP_032565729.1
type: Protein
SIO_000068: ncbiprotein

position:536589:-1
position: 536589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536524-536589:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:531689-531833:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:530475-530539:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:529027-529380:-1:exon

LOC116798160
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116798160
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(540811..540975)
location: region:540811-540975:-1
so has part: feature:540811-540975:-1:exon
subclass of: SO_0000979

116798160
type: Gene
SIO_000068: ncbigene

position:540811:-1
position: 540811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540975:-1
position: 540975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540811-540975:-1:exon

LOC116798160
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: guide_RNA
gene: LOC116798160
product: small Cajal body-specific RNA 1
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00553
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004360833.1
SIO_010081: LOC116798160
subclass of: SO_0000673
so part of: LOC116798160
location: complement(540811..540975)
location: region:540811-540975:-1
so has part: feature:540811-540975:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:540811-540975:-1:exon

STX12
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: STX12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(554050..567759)
location: region:554050-567759:-1
so has part: feature:554050-567759:-1:exon
subclass of: SO_0000010

116797902
type: Gene
SIO_000068: ncbigene

position:554050:-1
position: 554050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567759:-1
position: 567759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554050-567759:-1:exon

STX12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: STX12
product: syntaxin 12, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 ESTs, 11 long SRA reads, 22 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_032709839.1
SIO_010081: STX12
subclass of: SO_0000673
so part of: STX12
location: complement(join(554050..555493,556865..556947,557110..557182,557638..557743,559613..559656,560474..560611,562366..562465,564260..564329,567597..567759))
location: region:554050-567759:-1
so has part: feature:567597-567759:-1:exon
so has part: feature:564260-564329:-1:exon
so has part: feature:562366-562465:-1:exon
so has part: feature:560474-560611:-1:exon
so has part: feature:559613-559656:-1:exon
so has part: feature:557638-557743:-1:exon
so has part: feature:557110-557182:-1:exon
so has part: feature:556865-556947:-1:exon
so has part: feature:554050-555493:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:567597-567759:-1:exon

position:567597:-1
position: 567597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:564260-564329:-1:exon

position:564260:-1
position: 564260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564329:-1
position: 564329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:562366-562465:-1:exon

position:562366:-1
position: 562366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562465:-1
position: 562465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:560474-560611:-1:exon

position:560474:-1
position: 560474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560611:-1
position: 560611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:559613-559656:-1:exon

position:559613:-1
position: 559613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559656:-1
position: 559656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:557638-557743:-1:exon

position:557638:-1
position: 557638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:557743:-1
position: 557743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:557110-557182:-1:exon

position:557110:-1
position: 557110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:557182:-1
position: 557182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:556865-556947:-1:exon

position:556865:-1
position: 556865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556947:-1
position: 556947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:554050-555493:-1:exon

position:555493:-1
position: 555493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

STX12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: STX12
product: syntaxin 12, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 1 long SRA read, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_032709840.1
SIO_010081: STX12
subclass of: SO_0000673
so part of: STX12
location: complement(join(554050..555490,556865..556947,557110..557182,557638..557743,559613..559656,560474..560611,562366..562465,564260..564329,567597..567751))
location: region:554050-567751:-1
so has part: feature:567597-567751:-1:exon
so has part: feature:564260-564329:-1:exon
so has part: feature:562366-562465:-1:exon
so has part: feature:560474-560611:-1:exon
so has part: feature:559613-559656:-1:exon
so has part: feature:557638-557743:-1:exon
so has part: feature:557110-557182:-1:exon
so has part: feature:556865-556947:-1:exon
so has part: feature:554050-555490:-1:exon

position:567751:-1
position: 567751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:567597-567751:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564260-564329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:562366-562465:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560474-560611:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:559613-559656:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:557638-557743:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:557110-557182:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:556865-556947:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:554050-555490:-1:exon

position:555490:-1
position: 555490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

STX12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: STX12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syntaxin-12 isoform X2
translation: MSFGPLDPRGPAPAPPRDFGGIIQTCSGNVQRIAQYTAQIKNLMSQLGTKQDSSKLQENLQQLQHSANRLAKETNEYLKELGSLPLPLSASEQRQQRLQKERLMNDFSAALNNFQAVQRRVSEKEKETVARARAGSRISADERFREEQLVSFDSGEDWNQMQSQEEDVAITEQDLELIKERETAIRQLEADILDVNQIFKDLAMMIHDQGDMIDSIEANVESAEVHVERASEQLQRAAYYQKSRKKICILLLGLAVACLIIGLIIWRATK
SIO_010081: STX12
subclass of: SO_0000673
so part of: STX12
location: complement(join(555401..555490,556865..556947,557110..557182,557638..557743,559613..559656,560474..560611,562366..562465,564260..564329,567597..567705))
location: region:555401-567705:-1
so has part: feature:567597-567705:-1:exon
so has part: feature:564260-564329:-1:exon
so has part: feature:562366-562465:-1:exon
so has part: feature:560474-560611:-1:exon
so has part: feature:559613-559656:-1:exon
so has part: feature:557638-557743:-1:exon
so has part: feature:557110-557182:-1:exon
so has part: feature:556865-556947:-1:exon
so has part: feature:555401-555490:-1:exon

XP_032565731.1
type: Protein
SIO_000068: ncbiprotein

position:555401:-1
position: 555401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567705:-1
position: 567705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:567597-567705:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564260-564329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:562366-562465:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560474-560611:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:559613-559656:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:557638-557743:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:557110-557182:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:556865-556947:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:555401-555490:-1:exon

STX12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: STX12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syntaxin-12 isoform X1
translation: MSFGPLDPRGPAPAPPRDFGGIIQTCSGNVQRIAQYTAQIKNLMSQLGTKQDSSKLQENLQQLQHSANRLAKETNEYLKELGSLPLPLSASEQRQQRLQKERLMNDFSAALNNFQAVQRRVSEKEKETVARARAGSRISADERFREEQLVSFDSGEDWNQMQSQEEDVAITEQDLELIKERETAIRQLEADILDVNQIFKDLAMMIHDQGDMIDSIEANVESAEVHVERASEQLQRAAYYQKKSRKKICILLLGLAVACLIIGLIIWRATK
SIO_010081: STX12
subclass of: SO_0000673
so part of: STX12
location: complement(join(555401..555493,556865..556947,557110..557182,557638..557743,559613..559656,560474..560611,562366..562465,564260..564329,567597..567705))
location: region:555401-567705:-1
so has part: feature:567597-567705:-1:exon
so has part: feature:564260-564329:-1:exon
so has part: feature:562366-562465:-1:exon
so has part: feature:560474-560611:-1:exon
so has part: feature:559613-559656:-1:exon
so has part: feature:557638-557743:-1:exon
so has part: feature:557110-557182:-1:exon
so has part: feature:556865-556947:-1:exon
so has part: feature:555401-555493:-1:exon

XP_032565730.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:567597-567705:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564260-564329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:562366-562465:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560474-560611:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:559613-559656:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:557638-557743:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:557110-557182:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:556865-556947:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:555401-555493:-1:exon

LOC116798035
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116798035
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 569257..570324
location: region:569257-570324:1
so has part: feature:569257-570324:1:exon
subclass of: SO_0000011

116798035
type: Gene
SIO_000068: ncbigene

position:569257:1
position: 569257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570324:1
position: 570324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569257-570324:1:exon

LOC116798035
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116798035
product: uncharacterized LOC116798035
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004360808.1
SIO_010081: LOC116798035
subclass of: SO_0000673
so part of: LOC116798035
location: join(569257..570001,570122..570324)
location: region:569257-570324:1
so has part: feature:569257-570001:1:exon
so has part: feature:570122-570324:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:569257-570001:1:exon

position:570001:1
position: 570001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:570122-570324:1:exon

position:570122:1
position: 570122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CITED4
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: CITED4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(582311..584454)
location: region:582311-584454:-1
so has part: feature:582311-584454:-1:exon
subclass of: SO_0000010

116798110
type: Gene
SIO_000068: ncbigene

position:582311:-1
position: 582311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584454:-1
position: 584454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:582311-584454:-1:exon

CITED4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: CITED4
product: Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 36 ESTs, 14 long SRA reads, 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032710253.1
SIO_010081: CITED4
subclass of: SO_0000673
so part of: CITED4
location: complement(582311..584454)
location: region:582311-584454:-1
so has part: feature:582311-584454:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:582311-584454:-1:exon

CITED4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: CITED4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cbp/p300-interacting transactivator 4
translation: MAEHMMMPMSHGGTGLQSYRVGVSGLQGPPQHGQHVLRTLPAAAQMMPYGGTGMDGAMRPRPGLGGQMGHHQMQNAMMFNGPSQQQQYMGPVGTQQLMASMHLQKLNTQYQGHPLAMSNGPMGAGAQQYRVGPGQHPGMQHMPSPALTLNVMDTDLIDEDVLTSLVLELGLDRIQELPELFLGQNEFDFISDFVSKQQPSAISC
SIO_010081: CITED4
subclass of: SO_0000673
so part of: CITED4
location: complement(583544..584158)
location: region:583544-584158:-1
so has part: feature:583544-584158:-1:exon

XP_032566144.1
type: Protein
SIO_000068: ncbiprotein

position:583544:-1
position: 583544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584158:-1
position: 584158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583544-584158:-1:exon

CTPS1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: CTPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 743627..763086
location: region:743627-763086:1
so has part: feature:743627-763086:1:exon
subclass of: SO_0000010

116797993
type: Gene
SIO_000068: ncbigene

position:743627:1
position: 743627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763086:1
position: 763086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743627-763086:1:exon

CTPS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: CTPS1
product: CTP synthase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 2 long SRA reads, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032710043.1
SIO_010081: CTPS1
subclass of: SO_0000673
so part of: CTPS1
location: join(743627..743641,744580..744756,745163..745333,745969..746069,747719..747835,749197..749280,749527..749607,751281..751432,752890..753022,754420..754508,755386..755480,755993..756055,756635..756678,757436..757532,757783..757838,757923..758019,758290..758434,760343..760433,761524..763086)
location: region:743627-763086:1
so has part: feature:743627-743641:1:exon
so has part: feature:744580-744756:1:exon
so has part: feature:745163-745333:1:exon
so has part: feature:745969-746069:1:exon
so has part: feature:747719-747835:1:exon
so has part: feature:749197-749280:1:exon
so has part: feature:749527-749607:1:exon
so has part: feature:751281-751432:1:exon
so has part: feature:752890-753022:1:exon
so has part: feature:754420-754508:1:exon
so has part: feature:755386-755480:1:exon
so has part: feature:755993-756055:1:exon
so has part: feature:756635-756678:1:exon
so has part: feature:757436-757532:1:exon
so has part: feature:757783-757838:1:exon
so has part: feature:757923-758019:1:exon
so has part: feature:758290-758434:1:exon
so has part: feature:760343-760433:1:exon
so has part: feature:761524-763086:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:743627-743641:1:exon

position:743641:1
position: 743641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:744580-744756:1:exon

position:744580:1
position: 744580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744756:1
position: 744756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:745163-745333:1:exon

position:745163:1
position: 745163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:745333:1
position: 745333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:745969-746069:1:exon

position:745969:1
position: 745969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746069:1
position: 746069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:747719-747835:1:exon

position:747719:1
position: 747719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:747835:1
position: 747835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:749197-749280:1:exon

position:749197:1
position: 749197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:749280:1
position: 749280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:749527-749607:1:exon

position:749527:1
position: 749527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:749607:1
position: 749607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:751281-751432:1:exon

position:751281:1
position: 751281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:751432:1
position: 751432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:752890-753022:1:exon

position:752890:1
position: 752890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753022:1
position: 753022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:754420-754508:1:exon

position:754420:1
position: 754420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754508:1
position: 754508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:755386-755480:1:exon

position:755386:1
position: 755386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755480:1
position: 755480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:755993-756055:1:exon

position:755993:1
position: 755993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:756055:1
position: 756055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:756635-756678:1:exon

position:756635:1
position: 756635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:756678:1
position: 756678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:757436-757532:1:exon

position:757436:1
position: 757436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757532:1
position: 757532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:757783-757838:1:exon

position:757783:1
position: 757783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757838:1
position: 757838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:757923-758019:1:exon

position:757923:1
position: 757923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758019:1
position: 758019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:758290-758434:1:exon

position:758290:1
position: 758290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758434:1
position: 758434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:760343-760433:1:exon

position:760343:1
position: 760343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:760433:1
position: 760433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:761524-763086:1:exon

position:761524:1
position: 761524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CTPS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: CTPS1
product: CTP synthase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 2 long SRA reads, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032710042.1
SIO_010081: CTPS1
subclass of: SO_0000673
so part of: CTPS1
location: join(744194..744274,744580..744756,745163..745333,745969..746069,747719..747835,749197..749280,749527..749607,751281..751432,752890..753022,754420..754508,755386..755480,755993..756055,756635..756678,757436..757532,757783..757838,757923..758019,758290..758434,760343..760433,761524..763086)
location: region:744194-763086:1
so has part: feature:744194-744274:1:exon
so has part: feature:744580-744756:1:exon
so has part: feature:745163-745333:1:exon
so has part: feature:745969-746069:1:exon
so has part: feature:747719-747835:1:exon
so has part: feature:749197-749280:1:exon
so has part: feature:749527-749607:1:exon
so has part: feature:751281-751432:1:exon
so has part: feature:752890-753022:1:exon
so has part: feature:754420-754508:1:exon
so has part: feature:755386-755480:1:exon
so has part: feature:755993-756055:1:exon
so has part: feature:756635-756678:1:exon
so has part: feature:757436-757532:1:exon
so has part: feature:757783-757838:1:exon
so has part: feature:757923-758019:1:exon
so has part: feature:758290-758434:1:exon
so has part: feature:760343-760433:1:exon
so has part: feature:761524-763086:1:exon

position:744194:1
position: 744194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:744194-744274:1:exon

position:744274:1
position: 744274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:744580-744756:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:745163-745333:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:745969-746069:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:747719-747835:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:749197-749280:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:749527-749607:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:751281-751432:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:752890-753022:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:754420-754508:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:755386-755480:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:755993-756055:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:756635-756678:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:757436-757532:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:757783-757838:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:757923-758019:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:758290-758434:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:760343-760433:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:761524-763086:1:exon

CTPS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: CTPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CTP synthase 1
translation: MKYILVTGGVISGIGKGIIASSIGTILKSCGLHVTSIKIDPYINIDAGTFSPYEHGEVFVLDDGGEVDLDLGNYERFLDIRLTKDNNLTTGKIYQYVINKERKGDYLGKTVQVVPHITDAIQEWVMRQARIPVDEDGIEPQVCVIELGGTVGDIESMPFIEAFRQFQFKAKRENFCNIHVSLVPQPSSTGEQKTKPTQNSVRELRGLGLSPDLIVCRCSTPLDTSVKEKISMFCHVEPEQVICVHDVSSIYRVPLLLEEQGVVDYFRHRLDLPIERQPRRMLLKWKEMADRYDRLLETCSIALVGKYTKFSDSYASVIKALEHSALAINHKLDIKYIDSADLEPDTLQEEPVRYHEAWQKLCGADGVLVPGGFGVRGTEGKIQAISWARKQKKPFLGVCLGMQLAVVEFARSVLGWQDANSTEFDPKTAHPVVIDMPEHNPGQMGGTMRLGKRRTLFQTKNSIMRKLYGDHDFLEERHRHRFEVNPELKKCFEEQGLKFVGQDEEGERMEVVELEEHPFFVGVQYHPEFLSRPIKPSPPYFGLLLASAGRLTHYLQKGCRLSPRDTYSDRSGSSSPDLEITELKFPSVNHD
SIO_010081: CTPS1
subclass of: SO_0000673
so part of: CTPS1
location: join(744591..744756,745163..745333,745969..746069,747719..747835,749197..749280,749527..749607,751281..751432,752890..753022,754420..754508,755386..755480,755993..756055,756635..756678,757436..757532,757783..757838,757923..758019,758290..758434,760343..760427)
location: region:744591-760427:1
so has part: feature:744591-744756:1:exon
so has part: feature:745163-745333:1:exon
so has part: feature:745969-746069:1:exon
so has part: feature:747719-747835:1:exon
so has part: feature:749197-749280:1:exon
so has part: feature:749527-749607:1:exon
so has part: feature:751281-751432:1:exon
so has part: feature:752890-753022:1:exon
so has part: feature:754420-754508:1:exon
so has part: feature:755386-755480:1:exon
so has part: feature:755993-756055:1:exon
so has part: feature:756635-756678:1:exon
so has part: feature:757436-757532:1:exon
so has part: feature:757783-757838:1:exon
so has part: feature:757923-758019:1:exon
so has part: feature:758290-758434:1:exon
so has part: feature:760343-760427:1:exon

XP_032565933.1
type: Protein
SIO_000068: ncbiprotein

position:744591:1
position: 744591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:760427:1
position: 760427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:744591-744756:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:745163-745333:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:745969-746069:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:747719-747835:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:749197-749280:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:749527-749607:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:751281-751432:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:752890-753022:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:754420-754508:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:755386-755480:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:755993-756055:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:756635-756678:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:757436-757532:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:757783-757838:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:757923-758019:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:758290-758434:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:760343-760427:1:exon

CTPS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: CTPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CTP synthase 1
translation: MKYILVTGGVISGIGKGIIASSIGTILKSCGLHVTSIKIDPYINIDAGTFSPYEHGEVFVLDDGGEVDLDLGNYERFLDIRLTKDNNLTTGKIYQYVINKERKGDYLGKTVQVVPHITDAIQEWVMRQARIPVDEDGIEPQVCVIELGGTVGDIESMPFIEAFRQFQFKAKRENFCNIHVSLVPQPSSTGEQKTKPTQNSVRELRGLGLSPDLIVCRCSTPLDTSVKEKISMFCHVEPEQVICVHDVSSIYRVPLLLEEQGVVDYFRHRLDLPIERQPRRMLLKWKEMADRYDRLLETCSIALVGKYTKFSDSYASVIKALEHSALAINHKLDIKYIDSADLEPDTLQEEPVRYHEAWQKLCGADGVLVPGGFGVRGTEGKIQAISWARKQKKPFLGVCLGMQLAVVEFARSVLGWQDANSTEFDPKTAHPVVIDMPEHNPGQMGGTMRLGKRRTLFQTKNSIMRKLYGDHDFLEERHRHRFEVNPELKKCFEEQGLKFVGQDEEGERMEVVELEEHPFFVGVQYHPEFLSRPIKPSPPYFGLLLASAGRLTHYLQKGCRLSPRDTYSDRSGSSSPDLEITELKFPSVNHD
SIO_010081: CTPS1
subclass of: SO_0000673
so part of: CTPS1
location: join(744591..744756,745163..745333,745969..746069,747719..747835,749197..749280,749527..749607,751281..751432,752890..753022,754420..754508,755386..755480,755993..756055,756635..756678,757436..757532,757783..757838,757923..758019,758290..758434,760343..760427)
location: region:744591-760427:1
so has part: feature:744591-744756:1:exon
so has part: feature:745163-745333:1:exon
so has part: feature:745969-746069:1:exon
so has part: feature:747719-747835:1:exon
so has part: feature:749197-749280:1:exon
so has part: feature:749527-749607:1:exon
so has part: feature:751281-751432:1:exon
so has part: feature:752890-753022:1:exon
so has part: feature:754420-754508:1:exon
so has part: feature:755386-755480:1:exon
so has part: feature:755993-756055:1:exon
so has part: feature:756635-756678:1:exon
so has part: feature:757436-757532:1:exon
so has part: feature:757783-757838:1:exon
so has part: feature:757923-758019:1:exon
so has part: feature:758290-758434:1:exon
so has part: feature:760343-760427:1:exon

XP_032565934.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:744591-744756:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:745163-745333:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:745969-746069:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:747719-747835:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:749197-749280:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:749527-749607:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:751281-751432:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:752890-753022:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:754420-754508:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:755386-755480:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:755993-756055:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:756635-756678:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:757436-757532:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:757783-757838:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:757923-758019:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:758290-758434:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:760343-760427:1:exon

SCMH1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: SCMH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(764677..835924)
location: region:764677-835924:-1
so has part: feature:764677-835924:-1:exon
subclass of: SO_0000010

116797995
type: Gene
SIO_000068: ncbigene

position:764677:-1
position: 764677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:835924:-1
position: 835924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:764677-835924:-1:exon

SCMH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SCMH1
product: Scm polycomb group protein homolog 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032710046.1
SIO_010081: SCMH1
subclass of: SO_0000673
so part of: SCMH1
location: complement(join(764677..766476,768300..768442,802783..803026,803967..804055,807445..807679,808950..809020,814706..814774,817457..817541,820471..820577,835819..835924))
location: region:764677-835924:-1
so has part: feature:835819-835924:-1:exon
so has part: feature:820471-820577:-1:exon
so has part: feature:817457-817541:-1:exon
so has part: feature:814706-814774:-1:exon
so has part: feature:808950-809020:-1:exon
so has part: feature:807445-807679:-1:exon
so has part: feature:803967-804055:-1:exon
so has part: feature:802783-803026:-1:exon
so has part: feature:768300-768442:-1:exon
so has part: feature:764677-766476:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:835819-835924:-1:exon

position:835819:-1
position: 835819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:820471-820577:-1:exon

position:820471:-1
position: 820471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820577:-1
position: 820577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:817457-817541:-1:exon

position:817457:-1
position: 817457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817541:-1
position: 817541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:814706-814774:-1:exon

position:814706:-1
position: 814706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:814774:-1
position: 814774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:808950-809020:-1:exon

position:808950:-1
position: 808950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:809020:-1
position: 809020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:807445-807679:-1:exon

position:807445:-1
position: 807445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:807679:-1
position: 807679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:803967-804055:-1:exon

position:803967:-1
position: 803967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:804055:-1
position: 804055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:802783-803026:-1:exon

position:802783:-1
position: 802783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:803026:-1
position: 803026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:768300-768442:-1:exon

position:768300:-1
position: 768300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:768442:-1
position: 768442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:764677-766476:-1:exon

position:766476:-1
position: 766476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SCMH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SCMH1
product: Scm polycomb group protein homolog 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032710045.1
SIO_010081: SCMH1
subclass of: SO_0000673
so part of: SCMH1
location: complement(join(764677..766476,768300..768442,769449..769649,802783..803026,803967..804055,807445..807679,808950..809020,814706..814774,817457..817541,820471..820577,835819..835924))
location: region:764677-835924:-1
so has part: feature:835819-835924:-1:exon
so has part: feature:820471-820577:-1:exon
so has part: feature:817457-817541:-1:exon
so has part: feature:814706-814774:-1:exon
so has part: feature:808950-809020:-1:exon
so has part: feature:807445-807679:-1:exon
so has part: feature:803967-804055:-1:exon
so has part: feature:802783-803026:-1:exon
so has part: feature:769449-769649:-1:exon
so has part: feature:768300-768442:-1:exon
so has part: feature:764677-766476:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:835819-835924:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:820471-820577:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:817457-817541:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:814706-814774:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:808950-809020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:807445-807679:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:803967-804055:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:802783-803026:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:769449-769649:-1:exon

position:769449:-1
position: 769449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:769649:-1
position: 769649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:768300-768442:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:764677-766476:-1:exon

SCMH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SCMH1
product: Scm polycomb group protein homolog 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032710044.1
SIO_010081: SCMH1
subclass of: SO_0000673
so part of: SCMH1
location: complement(join(764677..766476,768300..768442,769449..769649,775224..775355,802783..803026,803967..804055,807445..807679,808950..809020,814706..814774,817457..817541,820471..820577,835819..835924))
location: region:764677-835924:-1
so has part: feature:835819-835924:-1:exon
so has part: feature:820471-820577:-1:exon
so has part: feature:817457-817541:-1:exon
so has part: feature:814706-814774:-1:exon
so has part: feature:808950-809020:-1:exon
so has part: feature:807445-807679:-1:exon
so has part: feature:803967-804055:-1:exon
so has part: feature:802783-803026:-1:exon
so has part: feature:775224-775355:-1:exon
so has part: feature:769449-769649:-1:exon
so has part: feature:768300-768442:-1:exon
so has part: feature:764677-766476:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:835819-835924:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:820471-820577:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:817457-817541:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:814706-814774:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:808950-809020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:807445-807679:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:803967-804055:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:802783-803026:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:775224-775355:-1:exon

position:775224:-1
position: 775224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775355:-1
position: 775355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:769449-769649:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:768300-768442:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:764677-766476:-1:exon

SCMH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SCMH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb protein SCMH1 isoform X3
translation: MRKPGPQKAIDWKDGKKHKYSRPSESPSQYQGHFTWEKYLKETCAIPAPAHCFKQSYTPPANEFKISMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPVRIFHKEPPSPSQNFFKTGMKLEAVDRKNPHFICPATIGEVRGSEVLITFDGWRGAFDYWCRYDSRDIFPVGWCSLTGDNLQPPGTKGSDRYLGPRDVSRLSGRDPSSWSVEEVMQFIRESDPQLGPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLTYHIDKLKQGKF
SIO_010081: SCMH1
subclass of: SO_0000673
so part of: SCMH1
location: complement(join(766351..766476,768300..768442,802783..803026,803967..804055,807445..807679,808950..809020,814706..814774,817457..817481))
location: region:766351-817481:-1
so has part: feature:817457-817481:-1:exon
so has part: feature:814706-814774:-1:exon
so has part: feature:808950-809020:-1:exon
so has part: feature:807445-807679:-1:exon
so has part: feature:803967-804055:-1:exon
so has part: feature:802783-803026:-1:exon
so has part: feature:768300-768442:-1:exon
so has part: feature:766351-766476:-1:exon

XP_032565937.1
type: Protein
SIO_000068: ncbiprotein

position:766351:-1
position: 766351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817481:-1
position: 817481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:817457-817481:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:814706-814774:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:808950-809020:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:807445-807679:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:803967-804055:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:802783-803026:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:768300-768442:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:766351-766476:-1:exon

SCMH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SCMH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb protein SCMH1 isoform X2
translation: MRKPGPQKAIDWKDGKKHKYSRPSESPSQYQGHFTWEKYLKETCAIPAPAHCFKQSYTPPANEFKISMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPVRIFHKEPPSPSQNFFKTGMKLEAVDRKNPHFICPATIGEVRGSEVLITFDGWRGAFDYWCRYDSRDIFPVGWCSLTGDNLQPPGTKGETFVLGDGLPGPLEPRLDPMDSALNSVNSSSHSRSSRDCRLPGYRHLHQPSSLSQGTSALRRPSSGGSDRYLGPRDVSRLSGRDPSSWSVEEVMQFIRESDPQLGPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLTYHIDKLKQGKF
SIO_010081: SCMH1
subclass of: SO_0000673
so part of: SCMH1
location: complement(join(766351..766476,768300..768442,769449..769649,802783..803026,803967..804055,807445..807679,808950..809020,814706..814774,817457..817481))
location: region:766351-817481:-1
so has part: feature:817457-817481:-1:exon
so has part: feature:814706-814774:-1:exon
so has part: feature:808950-809020:-1:exon
so has part: feature:807445-807679:-1:exon
so has part: feature:803967-804055:-1:exon
so has part: feature:802783-803026:-1:exon
so has part: feature:769449-769649:-1:exon
so has part: feature:768300-768442:-1:exon
so has part: feature:766351-766476:-1:exon

XP_032565936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:817457-817481:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:814706-814774:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:808950-809020:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:807445-807679:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:803967-804055:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:802783-803026:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:769449-769649:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:768300-768442:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:766351-766476:-1:exon

SCMH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SCMH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polycomb protein SCMH1 isoform X1
translation: MRKPGPQKAIDWKDGKKHKYSRPSESPSQYQGHFTWEKYLKETCAIPAPAHCFKQSYTPPANEFKISMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPVRIFHKEPPSPSQNFFKTGMKLEAVDRKNPHFICPATIGEVRGSEVLITFDGWRGAFDYWCRYDSRDIFPVGWCSLTGDNLQPPGTKDRSSSLDGSLQGPGRGTKRYSQDSPPYTAPLSPKLPKNDRHPLEGETFVLGDGLPGPLEPRLDPMDSALNSVNSSSHSRSSRDCRLPGYRHLHQPSSLSQGTSALRRPSSGGSDRYLGPRDVSRLSGRDPSSWSVEEVMQFIRESDPQLGPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLTYHIDKLKQGKF
SIO_010081: SCMH1
subclass of: SO_0000673
so part of: SCMH1
location: complement(join(766351..766476,768300..768442,769449..769649,775224..775355,802783..803026,803967..804055,807445..807679,808950..809020,814706..814774,817457..817481))
location: region:766351-817481:-1
so has part: feature:817457-817481:-1:exon
so has part: feature:814706-814774:-1:exon
so has part: feature:808950-809020:-1:exon
so has part: feature:807445-807679:-1:exon
so has part: feature:803967-804055:-1:exon
so has part: feature:802783-803026:-1:exon
so has part: feature:775224-775355:-1:exon
so has part: feature:769449-769649:-1:exon
so has part: feature:768300-768442:-1:exon
so has part: feature:766351-766476:-1:exon

XP_032565935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:817457-817481:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:814706-814774:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:808950-809020:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:807445-807679:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:803967-804055:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:802783-803026:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:775224-775355:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:769449-769649:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:768300-768442:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:766351-766476:-1:exon

LOC116797997
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116797997
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(782079..796309)
location: region:782079-796309:-1
so has part: feature:782079-796309:-1:exon
subclass of: SO_0000011

116797997
type: Gene
SIO_000068: ncbigene

position:782079:-1
position: 782079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:796309:-1
position: 796309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:782079-796309:-1:exon

LOC116797997
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116797997
product: uncharacterized LOC116797997
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004360795.1
SIO_010081: LOC116797997
subclass of: SO_0000673
so part of: LOC116797997
location: complement(join(782079..782241,783255..783380,796099..796309))
location: region:782079-796309:-1
so has part: feature:796099-796309:-1:exon
so has part: feature:783255-783380:-1:exon
so has part: feature:782079-782241:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:796099-796309:-1:exon

position:796099:-1
position: 796099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:783255-783380:-1:exon

position:783255:-1
position: 783255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:783380:-1
position: 783380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:782079-782241:-1:exon

position:782241:-1
position: 782241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FOXO6
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: FOXO6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 944749..980192
location: region:944749-980192:1
so has part: feature:944749-980192:1:exon
subclass of: SO_0000010

116797992
type: Gene
SIO_000068: ncbigene

position:944749:1
position: 944749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:980192:1
position: 980192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:944749-980192:1:exon

FOXO6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: FOXO6
product: forkhead box O6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_032710041.1
SIO_010081: FOXO6
subclass of: SO_0000673
so part of: FOXO6
location: join(944749..945674,977757..980192)
location: region:944749-980192:1
so has part: feature:944749-945674:1:exon
so has part: feature:977757-980192:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:944749-945674:1:exon

position:945674:1
position: 945674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:977757-980192:1:exon

position:977757:1
position: 977757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FOXO6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: FOXO6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead box protein O6
translation: MEEKLQAHQVEIDPDFEPQSRPRSCTWPLPHPDLAAEEEDGGAGRPPALAAGGDGAENAAAPVERRVAAAPPPPPGADVGQLRKAKTSRRNAWGNLSYADLITKAIESSPEKRLTLSQIYDWMVRYVPYFKDKGDSNSSAGWKNSIRHNLSLHTRFIRVQNEGTGKSSWWMLNPEGGKTGKTPRRRAVSMDNNSKFLRIKGKASKKKQLQVTQERGEDSPSSQQPKWSESPASHASDEYDAWADFRTRASSTASTLSGRLSPIMANHEPDELEEDDGTPSSPLMYPSPSSTMSPSLSARCSVELPRLTDLTGTISLNESLGESMLEDLQDGYAMSPSQQLPPAALRQRSSSFTFNSKCSNMGAAGNTYCGTIYSQPAMGLMRRLPMQTIQENKQATFSPVSSYRNASLQDLLSSISYAHKESMVPGDLPLPQASPMVPARGHRHNPLLCGGGEQGLSSYPSHPGSLMKSGALYHPSPAGHHPAVNTSALANPVSLMSLPSDSCSMAAVPHHGHLHPYANNQGAHMSLLDSLQGPYPGAVHPPVLGQDRFPADLDLDMFNGSLECDVESIILNDFMDSDEMDFNFDSALPPQNGLNVPALPGGPQPTNQSWVPG
SIO_010081: FOXO6
subclass of: SO_0000673
so part of: FOXO6
location: join(945246..945674,977757..979169)
location: region:945246-979169:1
so has part: feature:945246-945674:1:exon
so has part: feature:977757-979169:1:exon

XP_032565932.1
type: Protein
SIO_000068: ncbiprotein

position:945246:1
position: 945246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:979169:1
position: 979169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:945246-945674:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:977757-979169:1:exon

LOC116797998
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116797998
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1012727..1013882
location: region:1012727-1013882:1
so has part: feature:1012727-1013882:1:exon
subclass of: SO_0000011

116797998
type: Gene
SIO_000068: ncbigene

position:1012727:1
position: 1012727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013882:1
position: 1013882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1012727-1013882:1:exon

LOC116797998
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116797998
product: uncharacterized LOC116797998
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004360796.1
SIO_010081: LOC116797998
subclass of: SO_0000673
so part of: LOC116797998
location: join(1012727..1012861,1013714..1013882)
location: region:1012727-1013882:1
so has part: feature:1012727-1012861:1:exon
so has part: feature:1013714-1013882:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1012727-1012861:1:exon

position:1012861:1
position: 1012861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1013714-1013882:1:exon

position:1013714:1
position: 1013714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116798001
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116798001
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1018106..1038761)
location: region:1018106-1038761:-1
so has part: feature:1018106-1038761:-1:exon
subclass of: SO_0000011

116798001
type: Gene
SIO_000068: ncbigene

position:1018106:-1
position: 1018106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1038761:-1
position: 1038761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1018106-1038761:-1:exon

LOC116798001
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116798001
product: uncharacterized LOC116798001
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004360799.1
SIO_010081: LOC116798001
subclass of: SO_0000673
so part of: LOC116798001
location: complement(join(1018106..1018221,1028758..1028761,1038749..1038761))
location: region:1018106-1038761:-1
so has part: feature:1038749-1038761:-1:exon
so has part: feature:1028758-1028761:-1:exon
so has part: feature:1018106-1018221:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1038749-1038761:-1:exon

position:1038749:-1
position: 1038749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1028758-1028761:-1:exon

position:1028758:-1
position: 1028758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1028761:-1
position: 1028761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1018106-1018221:-1:exon

position:1018221:-1
position: 1018221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116798000
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116798000
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1142455..1158187)
location: region:1142455-1158187:-1
so has part: feature:1142455-1158187:-1:exon
subclass of: SO_0000011

116798000
type: Gene
SIO_000068: ncbigene

position:1142455:-1
position: 1142455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1158187:-1
position: 1158187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1142455-1158187:-1:exon

LOC116798000
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116798000
product: uncharacterized LOC116798000
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004360798.1
SIO_010081: LOC116798000
subclass of: SO_0000673
so part of: LOC116798000
location: complement(join(1142455..1143222,1148449..1148590,1157808..1158187))
location: region:1142455-1158187:-1
so has part: feature:1157808-1158187:-1:exon
so has part: feature:1148449-1148590:-1:exon
so has part: feature:1142455-1143222:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1157808-1158187:-1:exon

position:1157808:-1
position: 1157808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1148449-1148590:-1:exon

position:1148449:-1
position: 1148449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1148590:-1
position: 1148590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1142455-1143222:-1:exon

position:1143222:-1
position: 1143222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116797999
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116797999
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1198379..1199787
location: region:1198379-1199787:1
so has part: feature:1198379-1199787:1:exon
subclass of: SO_0000011

116797999
type: Gene
SIO_000068: ncbigene

position:1198379:1
position: 1198379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1199787:1
position: 1199787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1198379-1199787:1:exon

LOC116797999
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116797999
product: uncharacterized LOC116797999
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004360797.1
SIO_010081: LOC116797999
subclass of: SO_0000673
so part of: LOC116797999
location: join(1198379..1198571,1198671..1198784,1199586..1199787)
location: region:1198379-1199787:1
so has part: feature:1198379-1198571:1:exon
so has part: feature:1198671-1198784:1:exon
so has part: feature:1199586-1199787:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1198379-1198571:1:exon

position:1198571:1
position: 1198571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1198671-1198784:1:exon

position:1198671:1
position: 1198671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1198784:1
position: 1198784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1199586-1199787:1:exon

position:1199586:1
position: 1199586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116797996
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116797996
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1318504..1323871)
location: region:1318504-1323871:-1
so has part: feature:1318504-1323871:-1:exon
subclass of: SO_0000010

116797996
type: Gene
SIO_000068: ncbigene

position:1318504:-1
position: 1318504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1323871:-1
position: 1323871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1318504-1323871:-1:exon

LOC116797996
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116797996
product: endothelin-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032710048.1
SIO_010081: LOC116797996
subclass of: SO_0000673
so part of: LOC116797996
location: complement(join(1318504..1320533,1321299..1321403,1322128..1322247,1323326..1323458,1323722..1323871))
location: region:1318504-1323871:-1
so has part: feature:1323722-1323871:-1:exon
so has part: feature:1323326-1323458:-1:exon
so has part: feature:1322128-1322247:-1:exon
so has part: feature:1321299-1321403:-1:exon
so has part: feature:1318504-1320533:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1323722-1323871:-1:exon

position:1323722:-1
position: 1323722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1323326-1323458:-1:exon

position:1323326:-1
position: 1323326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1323458:-1
position: 1323458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1322128-1322247:-1:exon

position:1322128:-1
position: 1322128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1322247:-1
position: 1322247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1321299-1321403:-1:exon

position:1321299:-1
position: 1321299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1321403:-1
position: 1321403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1318504-1320533:-1:exon

position:1320533:-1
position: 1320533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116797996
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116797996
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endothelin-2-like
translation: MPRHPAVLLALALLALVEAGLGHPPPESHLAAHPRTKRCSCNSWMDKECIYFCHLDIIWVNTPGHTAPYGLGSPPRRRRRSPGRCQCSHSRDNICATFCQGKPGYLQSLKLPVSSGASTRSPQSGDMKPPHHGLLRALRDLAASSLRSGKHPQRSRRGAQPAVLPWRKNIWKKKR
SIO_010081: LOC116797996
subclass of: SO_0000673
so part of: LOC116797996
location: complement(join(1320422..1320533,1321299..1321403,1322128..1322247,1323326..1323458,1323722..1323779))
location: region:1320422-1323779:-1
so has part: feature:1323722-1323779:-1:exon
so has part: feature:1323326-1323458:-1:exon
so has part: feature:1322128-1322247:-1:exon
so has part: feature:1321299-1321403:-1:exon
so has part: feature:1320422-1320533:-1:exon

XP_032565939.1
type: Protein
SIO_000068: ncbiprotein

position:1320422:-1
position: 1320422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1323779:-1
position: 1323779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1323722-1323779:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1323326-1323458:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1322128-1322247:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1321299-1321403:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1320422-1320533:-1:exon

LOC116797991
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116797991
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1367331..1440071)
location: region:1367331-1440071:-1
so has part: feature:1367331-1440071:-1:exon
subclass of: SO_0000010

116797991
type: Gene
SIO_000068: ncbigene

position:1367331:-1
position: 1367331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1440071:-1
position: 1440071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1367331-1440071:-1:exon

LOC116797991
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116797991
product: transcription factor HIVEP3-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 13 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032710040.1
SIO_010081: LOC116797991
subclass of: SO_0000673
so part of: LOC116797991
location: complement(join(1367331..1373480,1376172..1377226,1384887..1384985,1394224..1394397,1427607..1427752,1431626..1437292,1440056..1440071))
location: region:1367331-1440071:-1
so has part: feature:1440056-1440071:-1:exon
so has part: feature:1431626-1437292:-1:exon
so has part: feature:1427607-1427752:-1:exon
so has part: feature:1394224-1394397:-1:exon
so has part: feature:1384887-1384985:-1:exon
so has part: feature:1376172-1377226:-1:exon
so has part: feature:1367331-1373480:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1440056-1440071:-1:exon

position:1440056:-1
position: 1440056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1431626-1437292:-1:exon

position:1431626:-1
position: 1431626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1437292:-1
position: 1437292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1427607-1427752:-1:exon

position:1427607:-1
position: 1427607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1427752:-1
position: 1427752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1394224-1394397:-1:exon

position:1394224:-1
position: 1394224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1394397:-1
position: 1394397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1384887-1384985:-1:exon

position:1384887:-1
position: 1384887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1384985:-1
position: 1384985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1376172-1377226:-1:exon

position:1376172:-1
position: 1376172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1377226:-1
position: 1377226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1367331-1373480:-1:exon

position:1373480:-1
position: 1373480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116797991
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116797991
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: transcription factor HIVEP3-like
translation: MDPEQSQKSTKKAEESPRQRLPKGEAFQASISSTTTYQGTSAPSQGTPLRDIISQQHFSGPLPVPREESQEKTGHQKQPKPSSFEHPPHLSQLQQHALSPAFMSPGKPEHVLEGPTWQLVDPVRPGPSGSFSSPGLHSHHGQLLPSHSQIIPGEDMPSVQKVYIPRPSQVSLKQAEEVHKKEKKPQKPGKYICQYCSRPCAKPSVLQKHIRSHTGERPYPCIPCGFSFKTKSNLYKHRKSHAHRIKAGLASGIGAEMYPSSLEMERIGGEDFEEPTEGESTDSEEETGAMSGHSVELSPRQKHGLLSSSLLSAGSQGSSHDRCSLSHSSMSQSLEDSSQFVEPSSDHALSHKSEDTHTIKQKLALRLSERKKVIDEQAFLSPGSKGSTESGYFSRSESAEQQISPPNTNAKSYAEIIFGKCGRIGQRTAALAANTTQGFPHLSTDEKPSMVPLSVPRTQVIEHITKLITINEAVVDTSEIDSVKPRRSSLSRRSSIESPKSGVYREPFQFDIKSGSSSQLDASKVLASHSEKIKPEQSLLSLQQSHSATETVPLLRSHSMPSAACTISSPHTFRGSYSFDDHIMEPEVLSRSQAFSSHPRTLKRQPAIELPLGVEYVSEEVGSANKETVSKPPEEPETKESDLTKKSRKGPKVKGFMYECNVCGARYKKRDNYEAHKKYYCSELQLSKPRSSASHPSSETEKGAADPDPWPQMMHYKLGSTLELTPLRKRRKEKSLGDDEEPPAFEVSDTPSSSAGPGAQFANPAASDVALNLTRESMKSPADPGKSAPSDVSATFHPRNTKPTSSGEGKERRTTSKEISVIQHTSSFEKSDSIEQASSLEEDKPLSQFPSQPTPQHSRPPHSLQPRLVRQHNIQVPEILVTEEPDRPETEPEPPPKEPEKTEEFQWPQRSQTLSQLPAEKLPPKKKRLRLAEMAQSSGESSFESVSLTRSPSQESSVSHGSSHSVSFDRDDHSKPEPSSQPSESHPKPPGVGSHMLMVPSHHHHSREMRRSASEQTPNVSHPSQMSETRSKSFDYGSLSSTPASTPGPSSSSASQERRKCFLVRQASLTRHPEHDPDPAPAGWTETEDPAPSSSKSSSTSLPHQPSSSPPLPSHGTYPSEKSQPKDSPEPTYSPPYTEALQVFHHPVPQLTLHEKQFLSPQVSIFPYQHLLPQPGQSAELFAAHTMSDILSAQFSMPQIPPSIFQTPPLPLPQTLIHPGPLHIAPPLMSHPAEVSFRHPSFLPVHYPGSSPIPSAFFLPLQSQFALHLPGEAGGHLPQLKSSLFPAAGASSLSPCTEYDSDSRLHPLTCTASPSVSVTVTQLVVPTRSEPMVSLVVPVRIQTNMPSYGSAMYTTLSQILVTQSQCSSSTIVLPKFNDRPPKGALVCSADVHGLGFDLAQMITEEQRSLFQSPYLRVPLPLPERKGYMPLTCPSDSVLGLEGGPATVGGSKRMLSPAGSLELTMETQQQKRVKEEEVSEAEEKLEVVKPPSAIEEGKKQEKSHFLAESQDRVEVEAPPSLSTEQSEPKETPSSLQQAVSHSGSPSFEALEEYEQPAGKQFLSKAPLQPVKKEDSKEQVEPSPPNPPSTAPPSEGTQSAMKSREGTDTKKVLQFPSLHTTTNVSWCYLNYIKPNHIQQVDRRSSVYASWCISLYNPNLPGISTKAALSLLRSKQKVSKETYTMATAPRPEAGRLVPASSRKPKMTEVHLPSLLSNEGRKDITRAEKEEEKRGKAEEEALVTKRGEPVRIKIFEGGYKSNEEYVYVRGRGRGKYVCEECGIRCKKPSMLKKHFARTQXVRPYVCKYCNFAFKTKGNLTKHMKSKAHSKKCQEMGVLVSSLVDLEAEEGTSEDLFQDSEGREGSEPVEEHQFSDLEESDDDDDNEDEEDEEEEESQDEPPLKLPEGTHTTLLLHSSGGSPSSQEEGTETASSLAQDTISSTQKAGEGQQASSSGLETKWSADSSDIAVCHSFLSLRRPALTSTEQLASAGRESITRPQMSLAM…
SIO_010081: LOC116797991
subclass of: SO_0000673
so part of: LOC116797991
location: complement(join(1372635..1373480,1376172..1377226,1384887..1384985,1394224..1394397,1427607..1427752,1431626..1436740))
location: region:1372635-1436740:-1
so has part: feature:1431626-1436740:-1:exon
so has part: feature:1427607-1427752:-1:exon
so has part: feature:1394224-1394397:-1:exon
so has part: feature:1384887-1384985:-1:exon
so has part: feature:1376172-1377226:-1:exon
so has part: feature:1372635-1373480:-1:exon

XP_032565931.1
type: Protein
SIO_000068: ncbiprotein

position:1372635:-1
position: 1372635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1436740:-1
position: 1436740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1431626-1436740:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1427607-1427752:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1394224-1394397:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1384887-1384985:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1376172-1377226:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1372635-1373480:-1:exon

LOC116798117
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116798117
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1703821..1707104
location: region:1703821-1707104:1
so has part: feature:1703821-1707104:1:exon
subclass of: SO_0000011

116798117
type: Gene
SIO_000068: ncbigene

position:1703821:1
position: 1703821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1707104:1
position: 1707104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1703821-1707104:1:exon

LOC116798117
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116798117
product: uncharacterized LOC116798117
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004360823.1
SIO_010081: LOC116798117
subclass of: SO_0000673
so part of: LOC116798117
location: join(1703821..1703991,1706916..1707104)
location: region:1703821-1707104:1
so has part: feature:1703821-1703991:1:exon
so has part: feature:1706916-1707104:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1703821-1703991:1:exon

position:1703991:1
position: 1703991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1706916-1707104:1:exon

position:1706916:1
position: 1706916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SERINC2
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: SERINC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1791842..1804716)
location: region:1791842-1804716:-1
so has part: feature:1791842-1804716:-1:exon
subclass of: SO_0000010

116798082
type: Gene
SIO_000068: ncbigene

position:1791842:-1
position: 1791842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1804716:-1
position: 1804716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1791842-1804716:-1:exon

SERINC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SERINC2
product: serine incorporator 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 22 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032710194.1
SIO_010081: SERINC2
subclass of: SO_0000673
so part of: SERINC2
location: complement(join(1791842..1792644,1793017..1793226,1794087..1794222,1794993..1795083,1795166..1795335,1795979..1796116,1796208..1796287,1796375..1796562,1797572..1797733,1804572..1804716))
location: region:1791842-1804716:-1
so has part: feature:1804572-1804716:-1:exon
so has part: feature:1797572-1797733:-1:exon
so has part: feature:1796375-1796562:-1:exon
so has part: feature:1796208-1796287:-1:exon
so has part: feature:1795979-1796116:-1:exon
so has part: feature:1795166-1795335:-1:exon
so has part: feature:1794993-1795083:-1:exon
so has part: feature:1794087-1794222:-1:exon
so has part: feature:1793017-1793226:-1:exon
so has part: feature:1791842-1792644:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1804572-1804716:-1:exon

position:1804572:-1
position: 1804572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1797572-1797733:-1:exon

position:1797572:-1
position: 1797572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1797733:-1
position: 1797733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1796375-1796562:-1:exon

position:1796375:-1
position: 1796375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1796562:-1
position: 1796562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1796208-1796287:-1:exon

position:1796208:-1
position: 1796208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1796287:-1
position: 1796287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1795979-1796116:-1:exon

position:1795979:-1
position: 1795979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1796116:-1
position: 1796116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1795166-1795335:-1:exon

position:1795166:-1
position: 1795166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1795335:-1
position: 1795335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1794993-1795083:-1:exon

position:1794993:-1
position: 1794993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1795083:-1
position: 1795083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1794087-1794222:-1:exon

position:1794087:-1
position: 1794087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1794222:-1
position: 1794222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1793017-1793226:-1:exon

position:1793017:-1
position: 1793017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1793226:-1
position: 1793226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1791842-1792644:-1:exon

position:1792644:-1
position: 1792644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SERINC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SERINC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine incorporator 2
translation: MGACLGVCSLLSCVSCLCGPAPCLLCGCCPSAKNSTISRLLFTFFLFLGTLVSIIMIIPGVEKELHKLPGFCEGSGSVLGVQTHVNCRSFLGHKAVYRMGFAMAAFFCLFAVLTVCVRSSKDPRAALHNGFWFFKFLVLVGITVGAFYIPDGAFTSVWFYFGVVGSFLFILIQLVLLIDFAHSWSQLWLRKASESNAKGWYAALCTITFVFYAASIAAVALLYVYYTKPQGCTEGKALISINLLLCLIVSVVSILPKIQEAQPHSGLLQASLITLYTIYVTWAALANVPVQSCNPTLLVRNSTSTATSTEPPTTWWDASSIVGLVIFILCTLFISLRSSDHPQVNKLMLTEEGGSGAGPGEAAEPGPHRAYDNERDGVSYNYTFFHLCLLLAALYIMMTLTNWYRPDESLQVLSSPWTAVWVKICSSWAGLLLYLWTLVAPLVLPDRDFS
SIO_010081: SERINC2
subclass of: SO_0000673
so part of: SERINC2
location: complement(join(1792506..1792644,1793017..1793226,1794087..1794222,1794993..1795083,1795166..1795335,1795979..1796116,1796208..1796287,1796375..1796562,1797572..1797733,1804572..1804610))
location: region:1792506-1804610:-1
so has part: feature:1804572-1804610:-1:exon
so has part: feature:1797572-1797733:-1:exon
so has part: feature:1796375-1796562:-1:exon
so has part: feature:1796208-1796287:-1:exon
so has part: feature:1795979-1796116:-1:exon
so has part: feature:1795166-1795335:-1:exon
so has part: feature:1794993-1795083:-1:exon
so has part: feature:1794087-1794222:-1:exon
so has part: feature:1793017-1793226:-1:exon
so has part: feature:1792506-1792644:-1:exon

XP_032566085.1
type: Protein
SIO_000068: ncbiprotein

position:1792506:-1
position: 1792506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1804610:-1
position: 1804610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1804572-1804610:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1797572-1797733:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1796375-1796562:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1796208-1796287:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1795979-1796116:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1795166-1795335:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1794993-1795083:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1794087-1794222:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1793017-1793226:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1792506-1792644:-1:exon

LOC116798002
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116798002
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1815796..1830280
location: region:1815796-1830280:1
so has part: feature:1815796-1830280:1:exon
subclass of: SO_0000010

116798002
type: Gene
SIO_000068: ncbigene

position:1815796:1
position: 1815796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1830280:1
position: 1830280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1815796-1830280:1:exon

LOC116798002
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116798002
product: cAMP-dependent protein kinase inhibitor beta-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032710049.1
SIO_010081: LOC116798002
subclass of: SO_0000673
so part of: LOC116798002
location: join(1815796..1816169,1827391..1827481,1828166..1828294,1829027..1829178,1829843..1830280)
location: region:1815796-1830280:1
so has part: feature:1815796-1816169:1:exon
so has part: feature:1827391-1827481:1:exon
so has part: feature:1828166-1828294:1:exon
so has part: feature:1829027-1829178:1:exon
so has part: feature:1829843-1830280:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1815796-1816169:1:exon

position:1816169:1
position: 1816169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1827391-1827481:1:exon

position:1827391:1
position: 1827391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1827481:1
position: 1827481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1828166-1828294:1:exon

position:1828166:1
position: 1828166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1828294:1
position: 1828294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1829027-1829178:1:exon

position:1829027:1
position: 1829027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1829178:1
position: 1829178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1829843-1830280:1:exon

position:1829843:1
position: 1829843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116798002
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116798002
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cAMP-dependent protein kinase inhibitor beta-like
translation: MTEVEPVLDFASSGRTGRRNALPDILGSPAGVSPADLPLKLAEMSLSAGSAQEMQSPSAEVPPPQPPSPELKDTS
SIO_010081: LOC116798002
subclass of: SO_0000673
so part of: LOC116798002
location: join(1829034..1829178,1829843..1829925)
location: region:1829034-1829925:1
so has part: feature:1829034-1829178:1:exon
so has part: feature:1829843-1829925:1:exon

XP_032565940.1
type: Protein
SIO_000068: ncbiprotein

position:1829034:1
position: 1829034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1829925:1
position: 1829925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1829034-1829178:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1829843-1829925:1:exon

FABP3
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: FABP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1833661..1837273
location: region:1833661-1837273:1
so has part: feature:1833661-1837273:1:exon
subclass of: SO_0000010

116798049
type: Gene
SIO_000068: ncbigene

position:1833661:1
position: 1833661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1837273:1
position: 1837273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1833661-1837273:1:exon

FABP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: FABP3
product: fatty acid binding protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 6 ESTs, 8 long SRA reads, 49 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_032710127.1
SIO_010081: FABP3
subclass of: SO_0000673
so part of: FABP3
location: join(1833661..1833794,1834483..1834655,1836794..1836895,1836980..1837273)
location: region:1833661-1837273:1
so has part: feature:1833661-1833794:1:exon
so has part: feature:1834483-1834655:1:exon
so has part: feature:1836794-1836895:1:exon
so has part: feature:1836980-1837273:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1833661-1833794:1:exon

position:1833794:1
position: 1833794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1834483-1834655:1:exon

position:1834483:1
position: 1834483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1834655:1
position: 1834655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1836794-1836895:1:exon

position:1836794:1
position: 1836794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1836895:1
position: 1836895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1836980-1837273:1:exon

position:1836980:1
position: 1836980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FABP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: FABP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fatty acid-binding protein, heart
translation: MVEAFAGTWKLVETNNFDEYMKALGVSFATRQMAGLTKPTTIIEVNGDKVTVKTQSTFKNTEINFKLDEEFDETTADDRHVKSVVKLDGGKLVHVQKWDGKETSLVRELKDGKLTLTLTMGNVVCTRTYEKAT
SIO_010081: FABP3
subclass of: SO_0000673
so part of: FABP3
location: join(1833722..1833794,1834483..1834655,1836794..1836895,1836980..1837033)
location: region:1833722-1837033:1
so has part: feature:1833722-1833794:1:exon
so has part: feature:1834483-1834655:1:exon
so has part: feature:1836794-1836895:1:exon
so has part: feature:1836980-1837033:1:exon

XP_032566018.1
type: Protein
SIO_000068: ncbiprotein

position:1833722:1
position: 1833722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1837033:1
position: 1837033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1833722-1833794:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1834483-1834655:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1836794-1836895:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1836980-1837033:1:exon

ZCCHC17
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: ZCCHC17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1838178..1855634)
location: region:1838178-1855634:-1
so has part: feature:1838178-1855634:-1:exon
subclass of: SO_0000010

116798048
type: Gene
SIO_000068: ncbigene

position:1838178:-1
position: 1838178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1855634:-1
position: 1855634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1838178-1855634:-1:exon

ZCCHC17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ZCCHC17
product: zinc finger CCHC-type containing 17, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032710126.1
SIO_010081: ZCCHC17
subclass of: SO_0000673
so part of: ZCCHC17
location: complement(join(1838178..1838936,1848222..1848370,1850164..1850264,1850804..1850895,1852741..1852841,1854180..1854237,1855221..1855326,1855616..1855634))
location: region:1838178-1855634:-1
so has part: feature:1855616-1855634:-1:exon
so has part: feature:1855221-1855326:-1:exon
so has part: feature:1854180-1854237:-1:exon
so has part: feature:1852741-1852841:-1:exon
so has part: feature:1850804-1850895:-1:exon
so has part: feature:1850164-1850264:-1:exon
so has part: feature:1848222-1848370:-1:exon
so has part: feature:1838178-1838936:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1855616-1855634:-1:exon

position:1855616:-1
position: 1855616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1855221-1855326:-1:exon

position:1855221:-1
position: 1855221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1855326:-1
position: 1855326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1854180-1854237:-1:exon

position:1854180:-1
position: 1854180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1854237:-1
position: 1854237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1852741-1852841:-1:exon

position:1852741:-1
position: 1852741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1852841:-1
position: 1852841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1850804-1850895:-1:exon

position:1850804:-1
position: 1850804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1850895:-1
position: 1850895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1850164-1850264:-1:exon

position:1850164:-1
position: 1850164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1850264:-1
position: 1850264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1848222-1848370:-1:exon

position:1848222:-1
position: 1848222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1848370:-1
position: 1848370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1838178-1838936:-1:exon

position:1838936:-1
position: 1838936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZCCHC17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ZCCHC17
product: zinc finger CCHC-type containing 17, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032710124.1
SIO_010081: ZCCHC17
subclass of: SO_0000673
so part of: ZCCHC17
location: complement(join(1838178..1838936,1848222..1848370,1850164..1850264,1850804..1850895,1852741..1852841,1854180..1854237,1855221..1855332,1855479..1855609))
location: region:1838178-1855609:-1
so has part: feature:1855479-1855609:-1:exon
so has part: feature:1855221-1855332:-1:exon
so has part: feature:1854180-1854237:-1:exon
so has part: feature:1852741-1852841:-1:exon
so has part: feature:1850804-1850895:-1:exon
so has part: feature:1850164-1850264:-1:exon
so has part: feature:1848222-1848370:-1:exon
so has part: feature:1838178-1838936:-1:exon

position:1855609:-1
position: 1855609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1855479-1855609:-1:exon

position:1855479:-1
position: 1855479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1855221-1855332:-1:exon

position:1855332:-1
position: 1855332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1854180-1854237:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1852741-1852841:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1850804-1850895:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1850164-1850264:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1848222-1848370:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1838178-1838936:-1:exon

ZCCHC17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ZCCHC17
product: zinc finger CCHC-type containing 17, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032710125.1
SIO_010081: ZCCHC17
subclass of: SO_0000673
so part of: ZCCHC17
location: complement(join(1838178..1838936,1848222..1848370,1850164..1850264,1850804..1850895,1852741..1852841,1854180..1854237,1855221..1855326,1855476..1855609))
location: region:1838178-1855609:-1
so has part: feature:1855476-1855609:-1:exon
so has part: feature:1855221-1855326:-1:exon
so has part: feature:1854180-1854237:-1:exon
so has part: feature:1852741-1852841:-1:exon
so has part: feature:1850804-1850895:-1:exon
so has part: feature:1850164-1850264:-1:exon
so has part: feature:1848222-1848370:-1:exon
so has part: feature:1838178-1838936:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1855476-1855609:-1:exon

position:1855476:-1
position: 1855476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1855221-1855326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1854180-1854237:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1852741-1852841:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1850804-1850895:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1850164-1850264:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1848222-1848370:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1838178-1838936:-1:exon

ZCCHC17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ZCCHC17
product: zinc finger CCHC-type containing 17, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032710123.1
SIO_010081: ZCCHC17
subclass of: SO_0000673
so part of: ZCCHC17
location: complement(join(1838178..1838936,1848222..1848370,1850164..1850264,1850804..1850895,1852741..1852841,1854180..1854237,1855221..1855329,1855476..1855609))
location: region:1838178-1855609:-1
so has part: feature:1855476-1855609:-1:exon
so has part: feature:1855221-1855329:-1:exon
so has part: feature:1854180-1854237:-1:exon
so has part: feature:1852741-1852841:-1:exon
so has part: feature:1850804-1850895:-1:exon
so has part: feature:1850164-1850264:-1:exon
so has part: feature:1848222-1848370:-1:exon
so has part: feature:1838178-1838936:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1855476-1855609:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1855221-1855329:-1:exon

position:1855329:-1
position: 1855329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1854180-1854237:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1852741-1852841:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1850804-1850895:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1850164-1850264:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1848222-1848370:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1838178-1838936:-1:exon

ZCCHC17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ZCCHC17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar protein of 40 kDa
translation: MEPLPELYAIFQGEVAAVTDYGAFIKIPGCRKQGLVHRTHMSSCRVDKPSEIVDVGDKVWVKLIGKEMKDDKLKLSLSMKVVNQGTGKDLDPNNVALDQDERKKRSFRDYTSQKITLEAVLNTVCKKCGCKGHFAKECFMQPGGTKYSLIPEEEEDEEAAAGHGGDNKTSLAEEPSKKRKKEKKKKKKHKAKESSETDSSSSDSDSSGAQPSSKRSKHSKAPKKKKKKKKHRK
SIO_010081: ZCCHC17
subclass of: SO_0000673
so part of: ZCCHC17
location: complement(join(1838778..1838936,1848222..1848370,1850164..1850264,1850804..1850895,1852741..1852841,1854180..1854237,1855221..1855262))
location: region:1838778-1855262:-1
so has part: feature:1855221-1855262:-1:exon
so has part: feature:1854180-1854237:-1:exon
so has part: feature:1852741-1852841:-1:exon
so has part: feature:1850804-1850895:-1:exon
so has part: feature:1850164-1850264:-1:exon
so has part: feature:1848222-1848370:-1:exon
so has part: feature:1838778-1838936:-1:exon

XP_032566014.1
type: Protein
SIO_000068: ncbiprotein

position:1838778:-1
position: 1838778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1855262:-1
position: 1855262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1855221-1855262:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1854180-1854237:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1852741-1852841:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1850804-1850895:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1850164-1850264:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1848222-1848370:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1838778-1838936:-1:exon

ZCCHC17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ZCCHC17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar protein of 40 kDa
translation: MEPLPELYAIFQGEVAAVTDYGAFIKIPGCRKQGLVHRTHMSSCRVDKPSEIVDVGDKVWVKLIGKEMKDDKLKLSLSMKVVNQGTGKDLDPNNVALDQDERKKRSFRDYTSQKITLEAVLNTVCKKCGCKGHFAKECFMQPGGTKYSLIPEEEEDEEAAAGHGGDNKTSLAEEPSKKRKKEKKKKKKHKAKESSETDSSSSDSDSSGAQPSSKRSKHSKAPKKKKKKKKHRK
SIO_010081: ZCCHC17
subclass of: SO_0000673
so part of: ZCCHC17
location: complement(join(1838778..1838936,1848222..1848370,1850164..1850264,1850804..1850895,1852741..1852841,1854180..1854237,1855221..1855262))
location: region:1838778-1855262:-1
so has part: feature:1855221-1855262:-1:exon
so has part: feature:1854180-1854237:-1:exon
so has part: feature:1852741-1852841:-1:exon
so has part: feature:1850804-1850895:-1:exon
so has part: feature:1850164-1850264:-1:exon
so has part: feature:1848222-1848370:-1:exon
so has part: feature:1838778-1838936:-1:exon

XP_032566015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1855221-1855262:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1854180-1854237:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1852741-1852841:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1850804-1850895:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1850164-1850264:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1848222-1848370:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1838778-1838936:-1:exon

ZCCHC17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ZCCHC17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar protein of 40 kDa
translation: MEPLPELYAIFQGEVAAVTDYGAFIKIPGCRKQGLVHRTHMSSCRVDKPSEIVDVGDKVWVKLIGKEMKDDKLKLSLSMKVVNQGTGKDLDPNNVALDQDERKKRSFRDYTSQKITLEAVLNTVCKKCGCKGHFAKECFMQPGGTKYSLIPEEEEDEEAAAGHGGDNKTSLAEEPSKKRKKEKKKKKKHKAKESSETDSSSSDSDSSGAQPSSKRSKHSKAPKKKKKKKKHRK
SIO_010081: ZCCHC17
subclass of: SO_0000673
so part of: ZCCHC17
location: complement(join(1838778..1838936,1848222..1848370,1850164..1850264,1850804..1850895,1852741..1852841,1854180..1854237,1855221..1855262))
location: region:1838778-1855262:-1
so has part: feature:1855221-1855262:-1:exon
so has part: feature:1854180-1854237:-1:exon
so has part: feature:1852741-1852841:-1:exon
so has part: feature:1850804-1850895:-1:exon
so has part: feature:1850164-1850264:-1:exon
so has part: feature:1848222-1848370:-1:exon
so has part: feature:1838778-1838936:-1:exon

XP_032566016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1855221-1855262:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1854180-1854237:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1852741-1852841:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1850804-1850895:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1850164-1850264:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1848222-1848370:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1838778-1838936:-1:exon

ZCCHC17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ZCCHC17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar protein of 40 kDa
translation: MEPLPELYAIFQGEVAAVTDYGAFIKIPGCRKQGLVHRTHMSSCRVDKPSEIVDVGDKVWVKLIGKEMKDDKLKLSLSMKVVNQGTGKDLDPNNVALDQDERKKRSFRDYTSQKITLEAVLNTVCKKCGCKGHFAKECFMQPGGTKYSLIPEEEEDEEAAAGHGGDNKTSLAEEPSKKRKKEKKKKKKHKAKESSETDSSSSDSDSSGAQPSSKRSKHSKAPKKKKKKKKHRK
SIO_010081: ZCCHC17
subclass of: SO_0000673
so part of: ZCCHC17
location: complement(join(1838778..1838936,1848222..1848370,1850164..1850264,1850804..1850895,1852741..1852841,1854180..1854237,1855221..1855262))
location: region:1838778-1855262:-1
so has part: feature:1855221-1855262:-1:exon
so has part: feature:1854180-1854237:-1:exon
so has part: feature:1852741-1852841:-1:exon
so has part: feature:1850804-1850895:-1:exon
so has part: feature:1850164-1850264:-1:exon
so has part: feature:1848222-1848370:-1:exon
so has part: feature:1838778-1838936:-1:exon

XP_032566017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1855221-1855262:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1854180-1854237:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1852741-1852841:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1850804-1850895:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1850164-1850264:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1848222-1848370:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1838778-1838936:-1:exon

SNRNP40
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: SNRNP40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1855928..1869080
location: region:1855928-1869080:1
so has part: feature:1855928-1869080:1:exon
subclass of: SO_0000010

116798104
type: Gene
SIO_000068: ncbigene

position:1855928:1
position: 1855928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1869080:1
position: 1869080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1855928-1869080:1:exon

SNRNP40
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SNRNP40
product: small nuclear ribonucleoprotein U5 subunit 40
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 4 ESTs, 2 long SRA reads, 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032710240.1
SIO_010081: SNRNP40
subclass of: SO_0000673
so part of: SNRNP40
location: join(1855928..1856152,1856891..1857020,1858193..1858286,1859179..1859344,1860476..1860598,1861753..1861873,1862665..1862747,1863156..1863217,1865979..1866082,1868670..1869080)
location: region:1855928-1869080:1
so has part: feature:1855928-1856152:1:exon
so has part: feature:1856891-1857020:1:exon
so has part: feature:1858193-1858286:1:exon
so has part: feature:1859179-1859344:1:exon
so has part: feature:1860476-1860598:1:exon
so has part: feature:1861753-1861873:1:exon
so has part: feature:1862665-1862747:1:exon
so has part: feature:1863156-1863217:1:exon
so has part: feature:1865979-1866082:1:exon
so has part: feature:1868670-1869080:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1855928-1856152:1:exon

position:1856152:1
position: 1856152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1856891-1857020:1:exon

position:1856891:1
position: 1856891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1857020:1
position: 1857020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1858193-1858286:1:exon

position:1858193:1
position: 1858193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1858286:1
position: 1858286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1859179-1859344:1:exon

position:1859179:1
position: 1859179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1859344:1
position: 1859344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1860476-1860598:1:exon

position:1860476:1
position: 1860476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1860598:1
position: 1860598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1861753-1861873:1:exon

position:1861753:1
position: 1861753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1861873:1
position: 1861873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1862665-1862747:1:exon

position:1862665:1
position: 1862665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1862747:1
position: 1862747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1863156-1863217:1:exon

position:1863156:1
position: 1863156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1863217:1
position: 1863217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1865979-1866082:1:exon

position:1865979:1
position: 1865979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1866082:1
position: 1866082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1868670-1869080:1:exon

position:1868670:1
position: 1868670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SNRNP40
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SNRNP40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U5 small nuclear ribonucleoprotein 40 kDa protein
translation: MIEQQKRKVPGGPGPAPAPAPGPAPAPAAPGAAPAPAADLPLVPVPAKRPRHDVPGAPGTGGAGGQPPGGALLQGGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGNTLASAGFDRLILLWNVYGDCDNFATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEEPIILSASSDKRLYMGEIQ
SIO_010081: SNRNP40
subclass of: SO_0000673
so part of: SNRNP40
location: join(1855928..1856152,1856891..1857020,1858193..1858286,1859179..1859344,1860476..1860598,1861753..1861873,1862665..1862747,1863156..1863217,1865979..1866082,1868670..1868719)
location: region:1855928-1868719:1
so has part: feature:1855928-1856152:1:exon
so has part: feature:1856891-1857020:1:exon
so has part: feature:1858193-1858286:1:exon
so has part: feature:1859179-1859344:1:exon
so has part: feature:1860476-1860598:1:exon
so has part: feature:1861753-1861873:1:exon
so has part: feature:1862665-1862747:1:exon
so has part: feature:1863156-1863217:1:exon
so has part: feature:1865979-1866082:1:exon
so has part: feature:1868670-1868719:1:exon

XP_032566131.1
type: Protein
SIO_000068: ncbiprotein

position:1868719:1
position: 1868719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1855928-1856152:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1856891-1857020:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1858193-1858286:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1859179-1859344:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1860476-1860598:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1861753-1861873:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1862665-1862747:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1863156-1863217:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1865979-1866082:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1868670-1868719:1:exon

NKAIN1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: NKAIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1877454..1912428
location: region:1877454-1912428:1
so has part: feature:1877454-1912428:1:exon
subclass of: SO_0000010

116797969
type: Gene
SIO_000068: ncbigene

position:1877454:1
position: 1877454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1912428:1
position: 1912428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1877454-1912428:1:exon

NKAIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: NKAIN1
product: sodium/potassium transporting ATPase interacting 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032709999.1
SIO_010081: NKAIN1
subclass of: SO_0000673
so part of: NKAIN1
location: join(1877454..1877726,1900668..1900805,1901339..1901419,1903240..1903437,1904415..1904475,1907400..1907481,1910442..1912428)
location: region:1877454-1912428:1
so has part: feature:1877454-1877726:1:exon
so has part: feature:1900668-1900805:1:exon
so has part: feature:1901339-1901419:1:exon
so has part: feature:1903240-1903437:1:exon
so has part: feature:1904415-1904475:1:exon
so has part: feature:1907400-1907481:1:exon
so has part: feature:1910442-1912428:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1877454-1877726:1:exon

position:1877726:1
position: 1877726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1900668-1900805:1:exon

position:1900668:1
position: 1900668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1900805:1
position: 1900805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1901339-1901419:1:exon

position:1901339:1
position: 1901339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1901419:1
position: 1901419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1903240-1903437:1:exon

position:1903240:1
position: 1903240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1903437:1
position: 1903437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1904415-1904475:1:exon

position:1904415:1
position: 1904415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1904475:1
position: 1904475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1907400-1907481:1:exon

position:1907400:1
position: 1907400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1907481:1
position: 1907481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1910442-1912428:1:exon

position:1910442:1
position: 1910442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NKAIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: NKAIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/potassium-transporting ATPase subunit beta-1-interacting protein 1
translation: MGRCNGRCTLVGFCCLQLVAALERQIFDFLGYQWAPILANFLHIMAVILGIFGTIQYRSRYLMMYAVWLVLWVGWNAFIICFYLEVGRLSQDRDFIMTFNTSLHRSWWMENGPGCLVTPVLNSNLAPEDHHVITVSGCLLDYQYIEVVSSATQIFLALFGFVYACYVSKVFLEEEDSFDFIGGFDSYGYQAPQKTSHLQLQPLYTSG
SIO_010081: NKAIN1
subclass of: SO_0000673
so part of: NKAIN1
location: join(1877673..1877726,1900668..1900805,1901339..1901419,1903240..1903437,1904415..1904475,1907400..1907481,1910442..1910451)
location: region:1877673-1910451:1
so has part: feature:1877673-1877726:1:exon
so has part: feature:1900668-1900805:1:exon
so has part: feature:1901339-1901419:1:exon
so has part: feature:1903240-1903437:1:exon
so has part: feature:1904415-1904475:1:exon
so has part: feature:1907400-1907481:1:exon
so has part: feature:1910442-1910451:1:exon

XP_032565890.1
type: Protein
SIO_000068: ncbiprotein

position:1877673:1
position: 1877673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1910451:1
position: 1910451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1877673-1877726:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1900668-1900805:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1901339-1901419:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1903240-1903437:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1904415-1904475:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1907400-1907481:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1910442-1910451:1:exon

PUM1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: PUM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1927799..2010013
location: region:1927799-2010013:1
so has part: feature:1927799-2010013:1:exon
subclass of: SO_0000010

116798151
type: Gene
SIO_000068: ncbigene

position:1927799:1
position: 1927799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2010013:1
position: 2010013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1927799-2010013:1:exon

PUM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PUM1
product: pumilio RNA binding family member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 30 ESTs, 9 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032710323.1
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1927799..1927907,1932275..1932648,1949415..1949483,1956955..1957063,1959404..1959582,1961487..1961653,1963767..1964037,1970387..1970480,1971708..1971824,1977864..1978015,1982529..1982667,1984278..1984421,1985720..1986016,1987790..1988026,1995458..1995725,1997134..1997263,1998202..1998336,1999686..1999823,2001333..2001458,2002440..2002561,2004425..2004617,2008101..2010013)
location: region:1927799-2010013:1
so has part: feature:1927799-1927907:1:exon
so has part: feature:1932275-1932648:1:exon
so has part: feature:1949415-1949483:1:exon
so has part: feature:1956955-1957063:1:exon
so has part: feature:1959404-1959582:1:exon
so has part: feature:1961487-1961653:1:exon
so has part: feature:1963767-1964037:1:exon
so has part: feature:1970387-1970480:1:exon
so has part: feature:1971708-1971824:1:exon
so has part: feature:1977864-1978015:1:exon
so has part: feature:1982529-1982667:1:exon
so has part: feature:1984278-1984421:1:exon
so has part: feature:1985720-1986016:1:exon
so has part: feature:1987790-1988026:1:exon
so has part: feature:1995458-1995725:1:exon
so has part: feature:1997134-1997263:1:exon
so has part: feature:1998202-1998336:1:exon
so has part: feature:1999686-1999823:1:exon
so has part: feature:2001333-2001458:1:exon
so has part: feature:2002440-2002561:1:exon
so has part: feature:2004425-2004617:1:exon
so has part: feature:2008101-2010013:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1927799-1927907:1:exon

position:1927907:1
position: 1927907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1932275-1932648:1:exon

position:1932275:1
position: 1932275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1932648:1
position: 1932648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1949415-1949483:1:exon

position:1949415:1
position: 1949415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1949483:1
position: 1949483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1956955-1957063:1:exon

position:1956955:1
position: 1956955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1957063:1
position: 1957063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1959404-1959582:1:exon

position:1959404:1
position: 1959404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1959582:1
position: 1959582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1961487-1961653:1:exon

position:1961487:1
position: 1961487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1961653:1
position: 1961653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1963767-1964037:1:exon

position:1963767:1
position: 1963767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1964037:1
position: 1964037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1970387-1970480:1:exon

position:1970387:1
position: 1970387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1970480:1
position: 1970480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1971708-1971824:1:exon

position:1971708:1
position: 1971708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1971824:1
position: 1971824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1977864-1978015:1:exon

position:1977864:1
position: 1977864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1978015:1
position: 1978015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1982529-1982667:1:exon

position:1982529:1
position: 1982529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1982667:1
position: 1982667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1984278-1984421:1:exon

position:1984278:1
position: 1984278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1984421:1
position: 1984421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1985720-1986016:1:exon

position:1985720:1
position: 1985720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1986016:1
position: 1986016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1987790-1988026:1:exon

position:1987790:1
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urn:…
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urn:…
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position:1997263:1
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urn:…
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SIO_000628: feature:1998202-1998336:1:exon

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urn:…
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SIO_000628: feature:1999686-1999823:1:exon

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urn:…
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SIO_000628: feature:2001333-2001458:1:exon

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urn:…
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SIO_000628: feature:2008101-2010013:1:exon

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PUM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PUM1
product: pumilio RNA binding family member 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 24 ESTs, 6 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032710326.1
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1927799..1927907,1932275..1932648,1949415..1949483,1956955..1957063,1959404..1959582,1961487..1961653,1963767..1964037,1970387..1970480,1971708..1971824,1977864..1978015,1982529..1982667,1984278..1984421,1985720..1986016,1987790..1988026,1995458..1995725,1997134..1997263,1998202..1998330,1999686..1999823,2001333..2001458,2002440..2002561,2004425..2004617,2008101..2010013)
location: region:1927799-2010013:1
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so has part: feature:1999686-1999823:1:exon
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urn:…
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SIO_000300: 3
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SIO_000628: feature:1956955-1957063:1:exon

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SIO_000628: feature:1963767-1964037:1:exon

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SIO_000300: 8
SIO_000628: feature:1970387-1970480:1:exon

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SIO_000628: feature:1971708-1971824:1:exon

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SIO_000628: feature:1977864-1978015:1:exon

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SIO_000628: feature:1984278-1984421:1:exon

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SIO_000628: feature:1987790-1988026:1:exon

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SIO_000300: 15
SIO_000628: feature:1995458-1995725:1:exon

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SIO_000300: 16
SIO_000628: feature:1997134-1997263:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1998202-1998330:1:exon

position:1998330:1
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urn:…
SIO_000300: 18
SIO_000628: feature:1999686-1999823:1:exon

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SIO_000300: 19
SIO_000628: feature:2001333-2001458:1:exon

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SIO_000300: 20
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SIO_000628: feature:2008101-2010013:1:exon

PUM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PUM1
product: pumilio RNA binding family member 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 31 ESTs, 9 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032710327.1
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1927799..1927907,1932275..1932648,1949415..1949483,1956955..1957063,1959404..1959582,1961487..1961653,1963767..1964037,1970387..1970480,1971720..1971824,1977864..1978015,1982529..1982667,1984278..1984421,1985720..1986016,1987790..1988026,1995458..1995725,1997134..1997263,1998202..1998336,1999686..1999823,2001333..2001458,2002440..2002561,2004425..2004617,2008101..2010013)
location: region:1927799-2010013:1
so has part: feature:1927799-1927907:1:exon
so has part: feature:1932275-1932648:1:exon
so has part: feature:1949415-1949483:1:exon
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so has part: feature:1959404-1959582:1:exon
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urn:…
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SIO_000628: feature:1963767-1964037:1:exon

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SIO_000300: 8
SIO_000628: feature:1970387-1970480:1:exon

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SIO_000300: 9
SIO_000628: feature:1971720-1971824:1:exon

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urn:…
SIO_000300: 10
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SIO_000300: 13
SIO_000628: feature:1985720-1986016:1:exon

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SIO_000300: 14
SIO_000628: feature:1987790-1988026:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1995458-1995725:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1997134-1997263:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1998202-1998336:1:exon

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SIO_000300: 18
SIO_000628: feature:1999686-1999823:1:exon

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SIO_000300: 19
SIO_000628: feature:2001333-2001458:1:exon

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SIO_000300: 20
SIO_000628: feature:2002440-2002561:1:exon

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SIO_000300: 21
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urn:…
SIO_000300: 22
SIO_000628: feature:2008101-2010013:1:exon

PUM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PUM1
product: pumilio RNA binding family member 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 31 ESTs, 9 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032710328.1
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1927799..1927907,1932275..1932648,1949415..1949483,1956955..1957063,1959404..1959582,1961487..1961653,1963767..1964037,1970387..1970480,1971723..1971824,1977864..1978015,1982529..1982667,1984278..1984421,1985720..1986016,1987790..1988026,1995458..1995725,1997134..1997263,1998202..1998336,1999686..1999823,2001333..2001458,2002440..2002561,2004425..2004617,2008101..2010013)
location: region:1927799-2010013:1
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urn:…
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SIO_000628: feature:1963767-1964037:1:exon

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SIO_000300: 8
SIO_000628: feature:1970387-1970480:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1971723-1971824:1:exon

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urn:…
SIO_000300: 10
SIO_000628: feature:1977864-1978015:1:exon

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SIO_000628: feature:1982529-1982667:1:exon

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SIO_000628: feature:1984278-1984421:1:exon

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SIO_000628: feature:1985720-1986016:1:exon

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SIO_000300: 14
SIO_000628: feature:1987790-1988026:1:exon

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SIO_000300: 15
SIO_000628: feature:1995458-1995725:1:exon

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SIO_000300: 16
SIO_000628: feature:1997134-1997263:1:exon

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SIO_000300: 17
SIO_000628: feature:1998202-1998336:1:exon

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SIO_000300: 20
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SIO_000300: 21
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urn:…
SIO_000300: 22
SIO_000628: feature:2008101-2010013:1:exon

PUM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PUM1
product: pumilio RNA binding family member 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 25 ESTs, 6 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032710329.1
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1927799..1927907,1932275..1932648,1949415..1949483,1956955..1957063,1959404..1959582,1961487..1961653,1963767..1964037,1970387..1970480,1971723..1971824,1977864..1978015,1982529..1982667,1984278..1984421,1985720..1986016,1987790..1988026,1995458..1995725,1997134..1997263,1998202..1998330,1999686..1999823,2001333..2001458,2002440..2002561,2004425..2004617,2008101..2010013)
location: region:1927799-2010013:1
so has part: feature:1927799-1927907:1:exon
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urn:…
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SIO_000300: 7
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SIO_000300: 15
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urn:…
SIO_000300: 16
SIO_000628: feature:1997134-1997263:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1998202-1998330:1:exon

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SIO_000300: 18
SIO_000628: feature:1999686-1999823:1:exon

urn:…
SIO_000300: 19
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SIO_000300: 20
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urn:…
SIO_000300: 22
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PUM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PUM1
product: pumilio RNA binding family member 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 30 ESTs, 9 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032710325.1
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1927799..1927907,1932275..1932648,1949415..1949483,1956958..1957063,1959404..1959582,1961487..1961653,1963767..1964037,1970387..1970480,1971708..1971824,1977864..1978015,1982529..1982667,1984278..1984421,1985720..1986016,1987790..1988026,1995458..1995725,1997134..1997263,1998202..1998336,1999686..1999823,2001333..2001458,2002440..2002561,2004425..2004617,2008101..2010013)
location: region:1927799-2010013:1
so has part: feature:1927799-1927907:1:exon
so has part: feature:1932275-1932648:1:exon
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urn:…
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position:1956958:1
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reference: sequence
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urn:…
SIO_000300: 5
SIO_000628: feature:1959404-1959582:1:exon

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SIO_000628: feature:1963767-1964037:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1970387-1970480:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1971708-1971824:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1977864-1978015:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1982529-1982667:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1984278-1984421:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1985720-1986016:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1987790-1988026:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1995458-1995725:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1997134-1997263:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1998202-1998336:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1999686-1999823:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2001333-2001458:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2002440-2002561:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2004425-2004617:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2008101-2010013:1:exon

PUM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PUM1
product: pumilio RNA binding family member 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 24 ESTs, 6 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032710330.1
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1927799..1927907,1932275..1932648,1949415..1949483,1956958..1957063,1959404..1959582,1961487..1961653,1963767..1964037,1970387..1970480,1971708..1971824,1977864..1978015,1982529..1982667,1984278..1984421,1985720..1986016,1987790..1988026,1995458..1995725,1997134..1997263,1998202..1998330,1999686..1999823,2001333..2001458,2002440..2002561,2004425..2004617,2008101..2010013)
location: region:1927799-2010013:1
so has part: feature:1927799-1927907:1:exon
so has part: feature:1932275-1932648:1:exon
so has part: feature:1949415-1949483:1:exon
so has part: feature:1956958-1957063:1:exon
so has part: feature:1959404-1959582:1:exon
so has part: feature:1961487-1961653:1:exon
so has part: feature:1963767-1964037:1:exon
so has part: feature:1970387-1970480:1:exon
so has part: feature:1971708-1971824:1:exon
so has part: feature:1977864-1978015:1:exon
so has part: feature:1982529-1982667:1:exon
so has part: feature:1984278-1984421:1:exon
so has part: feature:1985720-1986016:1:exon
so has part: feature:1987790-1988026:1:exon
so has part: feature:1995458-1995725:1:exon
so has part: feature:1997134-1997263:1:exon
so has part: feature:1998202-1998330:1:exon
so has part: feature:1999686-1999823:1:exon
so has part: feature:2001333-2001458:1:exon
so has part: feature:2002440-2002561:1:exon
so has part: feature:2004425-2004617:1:exon
so has part: feature:2008101-2010013:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1927799-1927907:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1932275-1932648:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1949415-1949483:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1956958-1957063:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1959404-1959582:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1961487-1961653:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1963767-1964037:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1970387-1970480:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1971708-1971824:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1977864-1978015:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1982529-1982667:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1984278-1984421:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1985720-1986016:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1987790-1988026:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1995458-1995725:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1997134-1997263:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1998202-1998330:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1999686-1999823:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2001333-2001458:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2002440-2002561:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2004425-2004617:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2008101-2010013:1:exon

PUM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PUM1
product: pumilio RNA binding family member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 30 ESTs, 9 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032710324.1
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1930537..1930670,1932275..1932648,1949415..1949483,1956955..1957063,1959404..1959582,1961487..1961653,1963767..1964037,1970387..1970480,1971708..1971824,1977864..1978015,1982529..1982667,1984278..1984421,1985720..1986016,1987790..1988026,1995458..1995725,1997134..1997263,1998202..1998336,1999686..1999823,2001333..2001458,2002440..2002561,2004425..2004617,2008101..2010013)
location: region:1930537-2010013:1
so has part: feature:1930537-1930670:1:exon
so has part: feature:1932275-1932648:1:exon
so has part: feature:1949415-1949483:1:exon
so has part: feature:1956955-1957063:1:exon
so has part: feature:1959404-1959582:1:exon
so has part: feature:1961487-1961653:1:exon
so has part: feature:1963767-1964037:1:exon
so has part: feature:1970387-1970480:1:exon
so has part: feature:1971708-1971824:1:exon
so has part: feature:1977864-1978015:1:exon
so has part: feature:1982529-1982667:1:exon
so has part: feature:1984278-1984421:1:exon
so has part: feature:1985720-1986016:1:exon
so has part: feature:1987790-1988026:1:exon
so has part: feature:1995458-1995725:1:exon
so has part: feature:1997134-1997263:1:exon
so has part: feature:1998202-1998336:1:exon
so has part: feature:1999686-1999823:1:exon
so has part: feature:2001333-2001458:1:exon
so has part: feature:2002440-2002561:1:exon
so has part: feature:2004425-2004617:1:exon
so has part: feature:2008101-2010013:1:exon

position:1930537:1
position: 1930537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1930537-1930670:1:exon

position:1930670:1
position: 1930670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1932275-1932648:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1949415-1949483:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1956955-1957063:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1959404-1959582:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1961487-1961653:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1963767-1964037:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1970387-1970480:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1971708-1971824:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1977864-1978015:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1982529-1982667:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1984278-1984421:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1985720-1986016:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1987790-1988026:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1995458-1995725:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1997134-1997263:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1998202-1998336:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1999686-1999823:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2001333-2001458:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2002440-2002561:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2004425-2004617:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2008101-2010013:1:exon

PUM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PUM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pumilio homolog 1 isoform X1
translation: MSVACVLKRKAVLWQDSFSPHLKQHTQDTANPNMPVVLTSGTGSQAQPQPAANQALAAGTHSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEHQVRSMDELNHDFQALALEGRAMGEQLLPGKKFWESDDSSKDGPKGIFLGDQWRDSAWGASDHSVSQPIMVQRRPGQGFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDAENDENDKGDKKNKGTFDGDKLGDLKEEGDVMDKTNGLPVQNGIDADVKDFSRTPGNCQNSASEVDLLGPNQNGSEGLAQLASTNGAKPVEDFSNIESQSVPLDPMEHVGMEPLQFDYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGMFSAGLAPAAFVPNPYIISAAPPGTDPYAAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQAAAAAAATNSANQQTTQQTQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNSALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQAAVAAAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPTNNLASSSFYGNNSLSSNSQSSSLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSDLYKRTSSSLTPIGHSFYNGLGFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSLFSPSSTLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1932286..1932648,1949415..1949483,1956955..1957063,1959404..1959582,1961487..1961653,1963767..1964037,1970387..1970480,1971708..1971824,1977864..1978015,1982529..1982667,1984278..1984421,1985720..1986016,1987790..1988026,1995458..1995725,1997134..1997263,1998202..1998336,1999686..1999823,2001333..2001458,2002440..2002561,2004425..2004617,2008101..2008232)
location: region:1932286-2008232:1
so has part: feature:1932286-1932648:1:exon
so has part: feature:1949415-1949483:1:exon
so has part: feature:1956955-1957063:1:exon
so has part: feature:1959404-1959582:1:exon
so has part: feature:1961487-1961653:1:exon
so has part: feature:1963767-1964037:1:exon
so has part: feature:1970387-1970480:1:exon
so has part: feature:1971708-1971824:1:exon
so has part: feature:1977864-1978015:1:exon
so has part: feature:1982529-1982667:1:exon
so has part: feature:1984278-1984421:1:exon
so has part: feature:1985720-1986016:1:exon
so has part: feature:1987790-1988026:1:exon
so has part: feature:1995458-1995725:1:exon
so has part: feature:1997134-1997263:1:exon
so has part: feature:1998202-1998336:1:exon
so has part: feature:1999686-1999823:1:exon
so has part: feature:2001333-2001458:1:exon
so has part: feature:2002440-2002561:1:exon
so has part: feature:2004425-2004617:1:exon
so has part: feature:2008101-2008232:1:exon

XP_032566214.1
type: Protein
SIO_000068: ncbiprotein

position:1932286:1
position: 1932286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2008232:1
position: 2008232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1932286-1932648:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1949415-1949483:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1956955-1957063:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1959404-1959582:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1961487-1961653:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1963767-1964037:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1970387-1970480:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1971708-1971824:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1977864-1978015:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1982529-1982667:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1984278-1984421:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1985720-1986016:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1987790-1988026:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1995458-1995725:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1997134-1997263:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1998202-1998336:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1999686-1999823:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2001333-2001458:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2002440-2002561:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2004425-2004617:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2008101-2008232:1:exon

PUM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PUM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pumilio homolog 1 isoform X1
translation: MSVACVLKRKAVLWQDSFSPHLKQHTQDTANPNMPVVLTSGTGSQAQPQPAANQALAAGTHSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEHQVRSMDELNHDFQALALEGRAMGEQLLPGKKFWESDDSSKDGPKGIFLGDQWRDSAWGASDHSVSQPIMVQRRPGQGFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDAENDENDKGDKKNKGTFDGDKLGDLKEEGDVMDKTNGLPVQNGIDADVKDFSRTPGNCQNSASEVDLLGPNQNGSEGLAQLASTNGAKPVEDFSNIESQSVPLDPMEHVGMEPLQFDYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGMFSAGLAPAAFVPNPYIISAAPPGTDPYAAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQAAAAAAATNSANQQTTQQTQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNSALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQAAVAAAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPTNNLASSSFYGNNSLSSNSQSSSLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSDLYKRTSSSLTPIGHSFYNGLGFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSLFSPSSTLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1932286..1932648,1949415..1949483,1956955..1957063,1959404..1959582,1961487..1961653,1963767..1964037,1970387..1970480,1971708..1971824,1977864..1978015,1982529..1982667,1984278..1984421,1985720..1986016,1987790..1988026,1995458..1995725,1997134..1997263,1998202..1998336,1999686..1999823,2001333..2001458,2002440..2002561,2004425..2004617,2008101..2008232)
location: region:1932286-2008232:1
so has part: feature:1932286-1932648:1:exon
so has part: feature:1949415-1949483:1:exon
so has part: feature:1956955-1957063:1:exon
so has part: feature:1959404-1959582:1:exon
so has part: feature:1961487-1961653:1:exon
so has part: feature:1963767-1964037:1:exon
so has part: feature:1970387-1970480:1:exon
so has part: feature:1971708-1971824:1:exon
so has part: feature:1977864-1978015:1:exon
so has part: feature:1982529-1982667:1:exon
so has part: feature:1984278-1984421:1:exon
so has part: feature:1985720-1986016:1:exon
so has part: feature:1987790-1988026:1:exon
so has part: feature:1995458-1995725:1:exon
so has part: feature:1997134-1997263:1:exon
so has part: feature:1998202-1998336:1:exon
so has part: feature:1999686-1999823:1:exon
so has part: feature:2001333-2001458:1:exon
so has part: feature:2002440-2002561:1:exon
so has part: feature:2004425-2004617:1:exon
so has part: feature:2008101-2008232:1:exon

XP_032566215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1932286-1932648:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1949415-1949483:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1956955-1957063:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1959404-1959582:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1961487-1961653:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1963767-1964037:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1970387-1970480:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1971708-1971824:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1977864-1978015:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1982529-1982667:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1984278-1984421:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1985720-1986016:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1987790-1988026:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1995458-1995725:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1997134-1997263:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1998202-1998336:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1999686-1999823:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2001333-2001458:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2002440-2002561:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2004425-2004617:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2008101-2008232:1:exon

PUM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PUM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pumilio homolog 1 isoform X3
translation: MSVACVLKRKAVLWQDSFSPHLKQHTQDTANPNMPVVLTSGTGSQAQPQPAANQALAAGTHSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEHQVRSMDELNHDFQALALEGRAMGEQLLPGKKFWESDDSSKDGPKGIFLGDQWRDSAWGASDHSVSQPIMVQRRPGQGFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDAENDENDKGDKKNKGTFDGDKLGDLKEEGDVMDKTNGLPVQNGIDADVKDFSRTPGNCQNSASEVDLLGPNQNGSEGLAQLASTNGAKPVEDFSNIESQSVPLDPMEHVGMEPLQFDYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGMFSAGLAPAAFVPNPYIISAAPPGTDPYAAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQAAAAAAATNSANQQTTQQTQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNSALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQAAVAAAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPTNNLASSSFYGNNSLSSNSQSSSLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSDLYKRTSSSLTPIGHSFYNGLGFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSLFSPSSTLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1932286..1932648,1949415..1949483,1956955..1957063,1959404..1959582,1961487..1961653,1963767..1964037,1970387..1970480,1971708..1971824,1977864..1978015,1982529..1982667,1984278..1984421,1985720..1986016,1987790..1988026,1995458..1995725,1997134..1997263,1998202..1998330,1999686..1999823,2001333..2001458,2002440..2002561,2004425..2004617,2008101..2008232)
location: region:1932286-2008232:1
so has part: feature:1932286-1932648:1:exon
so has part: feature:1949415-1949483:1:exon
so has part: feature:1956955-1957063:1:exon
so has part: feature:1959404-1959582:1:exon
so has part: feature:1961487-1961653:1:exon
so has part: feature:1963767-1964037:1:exon
so has part: feature:1970387-1970480:1:exon
so has part: feature:1971708-1971824:1:exon
so has part: feature:1977864-1978015:1:exon
so has part: feature:1982529-1982667:1:exon
so has part: feature:1984278-1984421:1:exon
so has part: feature:1985720-1986016:1:exon
so has part: feature:1987790-1988026:1:exon
so has part: feature:1995458-1995725:1:exon
so has part: feature:1997134-1997263:1:exon
so has part: feature:1998202-1998330:1:exon
so has part: feature:1999686-1999823:1:exon
so has part: feature:2001333-2001458:1:exon
so has part: feature:2002440-2002561:1:exon
so has part: feature:2004425-2004617:1:exon
so has part: feature:2008101-2008232:1:exon

XP_032566217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1932286-1932648:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1949415-1949483:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1956955-1957063:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1959404-1959582:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1961487-1961653:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1963767-1964037:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1970387-1970480:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1971708-1971824:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1977864-1978015:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1982529-1982667:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1984278-1984421:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1985720-1986016:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1987790-1988026:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1995458-1995725:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1997134-1997263:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1998202-1998330:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1999686-1999823:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2001333-2001458:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2002440-2002561:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2004425-2004617:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2008101-2008232:1:exon

PUM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PUM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pumilio homolog 1 isoform X4
translation: MSVACVLKRKAVLWQDSFSPHLKQHTQDTANPNMPVVLTSGTGSQAQPQPAANQALAAGTHSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEHQVRSMDELNHDFQALALEGRAMGEQLLPGKKFWESDDSSKDGPKGIFLGDQWRDSAWGASDHSVSQPIMVQRRPGQGFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDAENDENDKGDKKNKGTFDGDKLGDLKEEGDVMDKTNGLPVQNGIDADVKDFSRTPGNCQNSASEVDLLGPNQNGSEGLAQLASTNGAKPVEDFSNIESQSVPLDPMEHVGMEPLQFDYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIAGLAPAAFVPNPYIISAAPPGTDPYAAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQAAAAAAATNSANQQTTQQTQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNSALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQAAVAAAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPTNNLASSSFYGNNSLSSNSQSSSLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSDLYKRTSSSLTPIGHSFYNGLGFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSLFSPSSTLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1932286..1932648,1949415..1949483,1956955..1957063,1959404..1959582,1961487..1961653,1963767..1964037,1970387..1970480,1971720..1971824,1977864..1978015,1982529..1982667,1984278..1984421,1985720..1986016,1987790..1988026,1995458..1995725,1997134..1997263,1998202..1998336,1999686..1999823,2001333..2001458,2002440..2002561,2004425..2004617,2008101..2008232)
location: region:1932286-2008232:1
so has part: feature:1932286-1932648:1:exon
so has part: feature:1949415-1949483:1:exon
so has part: feature:1956955-1957063:1:exon
so has part: feature:1959404-1959582:1:exon
so has part: feature:1961487-1961653:1:exon
so has part: feature:1963767-1964037:1:exon
so has part: feature:1970387-1970480:1:exon
so has part: feature:1971720-1971824:1:exon
so has part: feature:1977864-1978015:1:exon
so has part: feature:1982529-1982667:1:exon
so has part: feature:1984278-1984421:1:exon
so has part: feature:1985720-1986016:1:exon
so has part: feature:1987790-1988026:1:exon
so has part: feature:1995458-1995725:1:exon
so has part: feature:1997134-1997263:1:exon
so has part: feature:1998202-1998336:1:exon
so has part: feature:1999686-1999823:1:exon
so has part: feature:2001333-2001458:1:exon
so has part: feature:2002440-2002561:1:exon
so has part: feature:2004425-2004617:1:exon
so has part: feature:2008101-2008232:1:exon

XP_032566218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1932286-1932648:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1949415-1949483:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1956955-1957063:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1959404-1959582:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1961487-1961653:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1963767-1964037:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1970387-1970480:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1971720-1971824:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1977864-1978015:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1982529-1982667:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1984278-1984421:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1985720-1986016:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1987790-1988026:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1995458-1995725:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1997134-1997263:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1998202-1998336:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1999686-1999823:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2001333-2001458:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2002440-2002561:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2004425-2004617:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2008101-2008232:1:exon

PUM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PUM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pumilio homolog 1 isoform X5
translation: MSVACVLKRKAVLWQDSFSPHLKQHTQDTANPNMPVVLTSGTGSQAQPQPAANQALAAGTHSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEHQVRSMDELNHDFQALALEGRAMGEQLLPGKKFWESDDSSKDGPKGIFLGDQWRDSAWGASDHSVSQPIMVQRRPGQGFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDAENDENDKGDKKNKGTFDGDKLGDLKEEGDVMDKTNGLPVQNGIDADVKDFSRTPGNCQNSASEVDLLGPNQNGSEGLAQLASTNGAKPVEDFSNIESQSVPLDPMEHVGMEPLQFDYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGLAPAAFVPNPYIISAAPPGTDPYAAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQAAAAAAATNSANQQTTQQTQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNSALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQAAVAAAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPTNNLASSSFYGNNSLSSNSQSSSLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSDLYKRTSSSLTPIGHSFYNGLGFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSLFSPSSTLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1932286..1932648,1949415..1949483,1956955..1957063,1959404..1959582,1961487..1961653,1963767..1964037,1970387..1970480,1971723..1971824,1977864..1978015,1982529..1982667,1984278..1984421,1985720..1986016,1987790..1988026,1995458..1995725,1997134..1997263,1998202..1998336,1999686..1999823,2001333..2001458,2002440..2002561,2004425..2004617,2008101..2008232)
location: region:1932286-2008232:1
so has part: feature:1932286-1932648:1:exon
so has part: feature:1949415-1949483:1:exon
so has part: feature:1956955-1957063:1:exon
so has part: feature:1959404-1959582:1:exon
so has part: feature:1961487-1961653:1:exon
so has part: feature:1963767-1964037:1:exon
so has part: feature:1970387-1970480:1:exon
so has part: feature:1971723-1971824:1:exon
so has part: feature:1977864-1978015:1:exon
so has part: feature:1982529-1982667:1:exon
so has part: feature:1984278-1984421:1:exon
so has part: feature:1985720-1986016:1:exon
so has part: feature:1987790-1988026:1:exon
so has part: feature:1995458-1995725:1:exon
so has part: feature:1997134-1997263:1:exon
so has part: feature:1998202-1998336:1:exon
so has part: feature:1999686-1999823:1:exon
so has part: feature:2001333-2001458:1:exon
so has part: feature:2002440-2002561:1:exon
so has part: feature:2004425-2004617:1:exon
so has part: feature:2008101-2008232:1:exon

XP_032566219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1932286-1932648:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1949415-1949483:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1956955-1957063:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1959404-1959582:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1961487-1961653:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1963767-1964037:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1970387-1970480:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1971723-1971824:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1977864-1978015:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1982529-1982667:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1984278-1984421:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1985720-1986016:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1987790-1988026:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1995458-1995725:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1997134-1997263:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1998202-1998336:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1999686-1999823:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2001333-2001458:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2002440-2002561:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2004425-2004617:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2008101-2008232:1:exon

PUM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PUM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pumilio homolog 1 isoform X6
translation: MSVACVLKRKAVLWQDSFSPHLKQHTQDTANPNMPVVLTSGTGSQAQPQPAANQALAAGTHSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEHQVRSMDELNHDFQALALEGRAMGEQLLPGKKFWESDDSSKDGPKGIFLGDQWRDSAWGASDHSVSQPIMVQRRPGQGFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDAENDENDKGDKKNKGTFDGDKLGDLKEEGDVMDKTNGLPVQNGIDADVKDFSRTPGNCQNSASEVDLLGPNQNGSEGLAQLASTNGAKPVEDFSNIESQSVPLDPMEHVGMEPLQFDYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGLAPAAFVPNPYIISAAPPGTDPYAAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQAAAAAAATNSANQQTTQQTQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNSALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQAAVAAAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPTNNLASSSFYGNNSLSSNSQSSSLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSDLYKRTSSSLTPIGHSFYNGLGFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSLFSPSSTLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1932286..1932648,1949415..1949483,1956955..1957063,1959404..1959582,1961487..1961653,1963767..1964037,1970387..1970480,1971723..1971824,1977864..1978015,1982529..1982667,1984278..1984421,1985720..1986016,1987790..1988026,1995458..1995725,1997134..1997263,1998202..1998330,1999686..1999823,2001333..2001458,2002440..2002561,2004425..2004617,2008101..2008232)
location: region:1932286-2008232:1
so has part: feature:1932286-1932648:1:exon
so has part: feature:1949415-1949483:1:exon
so has part: feature:1956955-1957063:1:exon
so has part: feature:1959404-1959582:1:exon
so has part: feature:1961487-1961653:1:exon
so has part: feature:1963767-1964037:1:exon
so has part: feature:1970387-1970480:1:exon
so has part: feature:1971723-1971824:1:exon
so has part: feature:1977864-1978015:1:exon
so has part: feature:1982529-1982667:1:exon
so has part: feature:1984278-1984421:1:exon
so has part: feature:1985720-1986016:1:exon
so has part: feature:1987790-1988026:1:exon
so has part: feature:1995458-1995725:1:exon
so has part: feature:1997134-1997263:1:exon
so has part: feature:1998202-1998330:1:exon
so has part: feature:1999686-1999823:1:exon
so has part: feature:2001333-2001458:1:exon
so has part: feature:2002440-2002561:1:exon
so has part: feature:2004425-2004617:1:exon
so has part: feature:2008101-2008232:1:exon

XP_032566220.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1932286-1932648:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1949415-1949483:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1956955-1957063:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1959404-1959582:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1961487-1961653:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1963767-1964037:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1970387-1970480:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1971723-1971824:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1977864-1978015:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1982529-1982667:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1984278-1984421:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1985720-1986016:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1987790-1988026:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1995458-1995725:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1997134-1997263:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1998202-1998330:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1999686-1999823:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2001333-2001458:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2002440-2002561:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2004425-2004617:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2008101-2008232:1:exon

PUM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PUM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pumilio homolog 1 isoform X2
translation: MSVACVLKRKAVLWQDSFSPHLKQHTQDTANPNMPVVLTSGTGSQAQPQPAANQALAAGTHSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEHQVRSMDELNHDFQALALEGRAMGELLPGKKFWESDDSSKDGPKGIFLGDQWRDSAWGASDHSVSQPIMVQRRPGQGFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDAENDENDKGDKKNKGTFDGDKLGDLKEEGDVMDKTNGLPVQNGIDADVKDFSRTPGNCQNSASEVDLLGPNQNGSEGLAQLASTNGAKPVEDFSNIESQSVPLDPMEHVGMEPLQFDYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGMFSAGLAPAAFVPNPYIISAAPPGTDPYAAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQAAAAAAATNSANQQTTQQTQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNSALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQAAVAAAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPTNNLASSSFYGNNSLSSNSQSSSLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSDLYKRTSSSLTPIGHSFYNGLGFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSLFSPSSTLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1932286..1932648,1949415..1949483,1956958..1957063,1959404..1959582,1961487..1961653,1963767..1964037,1970387..1970480,1971708..1971824,1977864..1978015,1982529..1982667,1984278..1984421,1985720..1986016,1987790..1988026,1995458..1995725,1997134..1997263,1998202..1998336,1999686..1999823,2001333..2001458,2002440..2002561,2004425..2004617,2008101..2008232)
location: region:1932286-2008232:1
so has part: feature:1932286-1932648:1:exon
so has part: feature:1949415-1949483:1:exon
so has part: feature:1956958-1957063:1:exon
so has part: feature:1959404-1959582:1:exon
so has part: feature:1961487-1961653:1:exon
so has part: feature:1963767-1964037:1:exon
so has part: feature:1970387-1970480:1:exon
so has part: feature:1971708-1971824:1:exon
so has part: feature:1977864-1978015:1:exon
so has part: feature:1982529-1982667:1:exon
so has part: feature:1984278-1984421:1:exon
so has part: feature:1985720-1986016:1:exon
so has part: feature:1987790-1988026:1:exon
so has part: feature:1995458-1995725:1:exon
so has part: feature:1997134-1997263:1:exon
so has part: feature:1998202-1998336:1:exon
so has part: feature:1999686-1999823:1:exon
so has part: feature:2001333-2001458:1:exon
so has part: feature:2002440-2002561:1:exon
so has part: feature:2004425-2004617:1:exon
so has part: feature:2008101-2008232:1:exon

XP_032566216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1932286-1932648:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1949415-1949483:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1956958-1957063:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1959404-1959582:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1961487-1961653:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1963767-1964037:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1970387-1970480:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1971708-1971824:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1977864-1978015:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1982529-1982667:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1984278-1984421:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1985720-1986016:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1987790-1988026:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1995458-1995725:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1997134-1997263:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1998202-1998336:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1999686-1999823:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2001333-2001458:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2002440-2002561:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2004425-2004617:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2008101-2008232:1:exon

PUM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PUM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pumilio homolog 1 isoform X7
translation: MSVACVLKRKAVLWQDSFSPHLKQHTQDTANPNMPVVLTSGTGSQAQPQPAANQALAAGTHSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEHQVRSMDELNHDFQALALEGRAMGELLPGKKFWESDDSSKDGPKGIFLGDQWRDSAWGASDHSVSQPIMVQRRPGQGFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDAENDENDKGDKKNKGTFDGDKLGDLKEEGDVMDKTNGLPVQNGIDADVKDFSRTPGNCQNSASEVDLLGPNQNGSEGLAQLASTNGAKPVEDFSNIESQSVPLDPMEHVGMEPLQFDYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGMFSAGLAPAAFVPNPYIISAAPPGTDPYAAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQAAAAAAATNSANQQTTQQTQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNSALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQAAVAAAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPTNNLASSSFYGNNSLSSNSQSSSLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSDLYKRTSSSLTPIGHSFYNGLGFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSLFSPSSTLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
SIO_010081: PUM1
subclass of: SO_0000673
so part of: PUM1
location: join(1932286..1932648,1949415..1949483,1956958..1957063,1959404..1959582,1961487..1961653,1963767..1964037,1970387..1970480,1971708..1971824,1977864..1978015,1982529..1982667,1984278..1984421,1985720..1986016,1987790..1988026,1995458..1995725,1997134..1997263,1998202..1998330,1999686..1999823,2001333..2001458,2002440..2002561,2004425..2004617,2008101..2008232)
location: region:1932286-2008232:1
so has part: feature:1932286-1932648:1:exon
so has part: feature:1949415-1949483:1:exon
so has part: feature:1956958-1957063:1:exon
so has part: feature:1959404-1959582:1:exon
so has part: feature:1961487-1961653:1:exon
so has part: feature:1963767-1964037:1:exon
so has part: feature:1970387-1970480:1:exon
so has part: feature:1971708-1971824:1:exon
so has part: feature:1977864-1978015:1:exon
so has part: feature:1982529-1982667:1:exon
so has part: feature:1984278-1984421:1:exon
so has part: feature:1985720-1986016:1:exon
so has part: feature:1987790-1988026:1:exon
so has part: feature:1995458-1995725:1:exon
so has part: feature:1997134-1997263:1:exon
so has part: feature:1998202-1998330:1:exon
so has part: feature:1999686-1999823:1:exon
so has part: feature:2001333-2001458:1:exon
so has part: feature:2002440-2002561:1:exon
so has part: feature:2004425-2004617:1:exon
so has part: feature:2008101-2008232:1:exon

XP_032566221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1932286-1932648:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1949415-1949483:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1956958-1957063:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1959404-1959582:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1961487-1961653:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1963767-1964037:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1970387-1970480:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1971708-1971824:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1977864-1978015:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1982529-1982667:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1984278-1984421:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1985720-1986016:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1987790-1988026:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1995458-1995725:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1997134-1997263:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1998202-1998330:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1999686-1999823:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2001333-2001458:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2002440-2002561:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2004425-2004617:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2008101-2008232:1:exon

LOC116798162
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116798162
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1975389..1975472
location: region:1975389-1975472:1
so has part: feature:1975389-1975472:1:exon
subclass of: SO_0000578

116798162
type: Gene
SIO_000068: ncbigene

position:1975389:1
position: 1975389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1975472:1
position: 1975472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1975389-1975472:1:exon

LOC116798162
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: snoRNA
gene: LOC116798162
product: small nucleolar RNA SNORD103/SNORD85
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00188
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004360835.1
SIO_010081: LOC116798162
subclass of: SO_0000673
so part of: LOC116798162
location: 1975389..1975472
location: region:1975389-1975472:1
so has part: feature:1975389-1975472:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1975389-1975472:1:exon

LOC116798164
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116798164
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1994509..1994591
location: region:1994509-1994591:1
so has part: feature:1994509-1994591:1:exon
subclass of: SO_0000578

116798164
type: Gene
SIO_000068: ncbigene

position:1994509:1
position: 1994509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1994591:1
position: 1994591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1994509-1994591:1:exon

LOC116798164
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: snoRNA
gene: LOC116798164
product: small nucleolar RNA SNORD103/SNORD85
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00188
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004360837.1
SIO_010081: LOC116798164
subclass of: SO_0000673
so part of: LOC116798164
location: 1994509..1994591
location: region:1994509-1994591:1
so has part: feature:1994509-1994591:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1994509-1994591:1:exon

LOC116798163
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116798163
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2005473..2005555
location: region:2005473-2005555:1
so has part: feature:2005473-2005555:1:exon
subclass of: SO_0000578

116798163
type: Gene
SIO_000068: ncbigene

position:2005473:1
position: 2005473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2005555:1
position: 2005555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2005473-2005555:1:exon

LOC116798163
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: snoRNA
gene: LOC116798163
product: small nucleolar RNA SNORD103/SNORD85
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00188
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004360836.1
SIO_010081: LOC116798163
subclass of: SO_0000673
so part of: LOC116798163
location: 2005473..2005555
location: region:2005473-2005555:1
so has part: feature:2005473-2005555:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2005473-2005555:1:exon

SDC3
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: SDC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2015899..2062046
location: region:2015899-2062046:1
so has part: feature:2015899-2062046:1:exon
subclass of: SO_0000010

116798153
type: Gene
SIO_000068: ncbigene

position:2015899:1
position: 2015899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2062046:1
position: 2062046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2015899-2062046:1:exon

SDC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SDC3
product: syndecan 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032710331.1
SIO_010081: SDC3
subclass of: SO_0000673
so part of: SDC3
location: join(2015899..2016065,2055154..2055271,2055863..2056492,2058066..2058336,2059425..2062046)
location: region:2015899-2062046:1
so has part: feature:2015899-2016065:1:exon
so has part: feature:2055154-2055271:1:exon
so has part: feature:2055863-2056492:1:exon
so has part: feature:2058066-2058336:1:exon
so has part: feature:2059425-2062046:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2015899-2016065:1:exon

position:2016065:1
position: 2016065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2055154-2055271:1:exon

position:2055154:1
position: 2055154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2055271:1
position: 2055271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2055863-2056492:1:exon

position:2055863:1
position: 2055863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2056492:1
position: 2056492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2058066-2058336:1:exon

position:2058066:1
position: 2058066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2058336:1
position: 2058336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2059425-2062046:1:exon

position:2059425:1
position: 2059425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SDC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SDC3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: syndecan-3
translation: MPGEVPPPAPRGLRSLPVPLLLLLLLLSARTALAQRWRNENYERPVDLEGSGDDDPFGDEELDDVYSGSGSGYFEQELGLETAMSLPTDTAVPPPTTAAALPVTAVQPVATPLEPSPAQDTTPGQTTSLLYISRTTDTPVIPSWKATTTTSPTPSAPPTTTATTTTTTAATTTTPQATTTTSTTVATAKPTTTTTTTTTRRFLPPFATKAATTRATTLETPTTAVPETSTPTEVATSRLVPTSTAKPRSLPKPTSSRTAELTEKSTALPPAPATLPPTEAPQMEPGEVTTALDNELEVPVSSGPSGDFEIREEEETTRPDLGNEVMAVVTPPAGPGPGRNADTGLLDNTIDSGNSAAQLPQKNILERKEVLIAVIVGGVVGALFAAFLVMLLIYRMKKKDEGSYTLEEPKQANVTYQKPDKQEEFYA
SIO_010081: SDC3
subclass of: SO_0000673
so part of: SDC3
location: join(2015967..2016065,2055154..2055271,2055863..2056492,2058066..2058336,2059425..2059591)
location: region:2015967-2059591:1
so has part: feature:2015967-2016065:1:exon
so has part: feature:2055154-2055271:1:exon
so has part: feature:2055863-2056492:1:exon
so has part: feature:2058066-2058336:1:exon
so has part: feature:2059425-2059591:1:exon

XP_032566222.1
type: Protein
SIO_000068: ncbiprotein

position:2015967:1
position: 2015967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2059591:1
position: 2059591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2015967-2016065:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2055154-2055271:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2055863-2056492:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2058066-2058336:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2059425-2059591:1:exon

LOC116798055
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116798055
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2129576..2130294)
location: region:2129576-2130294:-1
so has part: feature:2129576-2130294:-1:exon
subclass of: SO_0000011

116798055
type: Gene
SIO_000068: ncbigene

position:2129576:-1
position: 2129576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2130294:-1
position: 2130294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2129576-2130294:-1:exon

LOC116798055
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116798055
product: uncharacterized LOC116798055
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004360814.1
SIO_010081: LOC116798055
subclass of: SO_0000673
so part of: LOC116798055
location: complement(join(2129576..2129660,2129792..2129830,2129952..2130294))
location: region:2129576-2130294:-1
so has part: feature:2129952-2130294:-1:exon
so has part: feature:2129792-2129830:-1:exon
so has part: feature:2129576-2129660:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2129952-2130294:-1:exon

position:2129952:-1
position: 2129952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2129792-2129830:-1:exon

position:2129792:-1
position: 2129792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2129830:-1
position: 2129830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2129576-2129660:-1:exon

position:2129660:-1
position: 2129660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LAPTM5
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LAPTM5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2257278..2280671
location: region:2257278-2280671:1
so has part: feature:2257278-2280671:1:exon
subclass of: SO_0000010

116798119
type: Gene
SIO_000068: ncbigene

position:2257278:1
position: 2257278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2280671:1
position: 2280671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2257278-2280671:1:exon

LAPTM5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LAPTM5
product: lysosomal protein transmembrane 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 4 long SRA reads, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032710264.1
SIO_010081: LAPTM5
subclass of: SO_0000673
so part of: LAPTM5
location: join(2257278..2257578,2265515..2265608,2271465..2271541,2272679..2272807,2273293..2273418,2273845..2273940,2278768..2278860,2279961..2280671)
location: region:2257278-2280671:1
so has part: feature:2257278-2257578:1:exon
so has part: feature:2265515-2265608:1:exon
so has part: feature:2271465-2271541:1:exon
so has part: feature:2272679-2272807:1:exon
so has part: feature:2273293-2273418:1:exon
so has part: feature:2273845-2273940:1:exon
so has part: feature:2278768-2278860:1:exon
so has part: feature:2279961-2280671:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2257278-2257578:1:exon

position:2257578:1
position: 2257578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2265515-2265608:1:exon

position:2265515:1
position: 2265515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2265608:1
position: 2265608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2271465-2271541:1:exon

position:2271465:1
position: 2271465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2271541:1
position: 2271541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2272679-2272807:1:exon

position:2272679:1
position: 2272679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2272807:1
position: 2272807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2273293-2273418:1:exon

position:2273293:1
position: 2273293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2273418:1
position: 2273418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2273845-2273940:1:exon

position:2273845:1
position: 2273845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2273940:1
position: 2273940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2278768-2278860:1:exon

position:2278768:1
position: 2278768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2278860:1
position: 2278860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2279961-2280671:1:exon

position:2279961:1
position: 2279961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LAPTM5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LAPTM5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysosomal-associated transmembrane protein 5
translation: MTPQTSPEPPKCCFFSIKTATVALGIFHLVMSVLLLIEYSLEVSNGKGFHKDLPKDYYGIADVVTSFLLIIMLFVISFHLLLGVLKKRERLLIPFLALQAMDFLLSLLTMFSSYLQVPVLISVSSLSHMQGHSKIPLLALQLLDFCLSILTLCSSYVEVPTYLSLKPSDNGGFLPTLEKLPTEDYAKVMITFTIAFIAVLFLKAYMFKCVLSCFKYIKASKREEVKVDPQAVEKAALPSYEEALELPSKESPPPYVTI
SIO_010081: LAPTM5
subclass of: SO_0000673
so part of: LAPTM5
location: join(2257492..2257578,2265515..2265608,2271465..2271541,2272679..2272807,2273293..2273418,2273845..2273940,2278768..2278860,2279961..2280035)
location: region:2257492-2280035:1
so has part: feature:2257492-2257578:1:exon
so has part: feature:2265515-2265608:1:exon
so has part: feature:2271465-2271541:1:exon
so has part: feature:2272679-2272807:1:exon
so has part: feature:2273293-2273418:1:exon
so has part: feature:2273845-2273940:1:exon
so has part: feature:2278768-2278860:1:exon
so has part: feature:2279961-2280035:1:exon

XP_032566155.1
type: Protein
SIO_000068: ncbiprotein

position:2257492:1
position: 2257492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2280035:1
position: 2280035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2257492-2257578:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2265515-2265608:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2271465-2271541:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2272679-2272807:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2273293-2273418:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2273845-2273940:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2278768-2278860:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2279961-2280035:1:exon

MATN1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: MATN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2290464..2317552
location: region:2290464-2317552:1
so has part: feature:2290464-2317552:1:exon
subclass of: SO_0000010

116797982
type: Gene
SIO_000068: ncbigene

position:2290464:1
position: 2290464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2317552:1
position: 2317552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2290464-2317552:1:exon

MATN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: MATN1
product: matrilin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 15 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032710027.1
SIO_010081: MATN1
subclass of: SO_0000673
so part of: MATN1
location: join(2290464..2290551,2294951..2295297,2304297..2304519,2307964..2308089,2308420..2308833,2312007..2312159,2314530..2314610,2316361..2317552)
location: region:2290464-2317552:1
so has part: feature:2290464-2290551:1:exon
so has part: feature:2294951-2295297:1:exon
so has part: feature:2304297-2304519:1:exon
so has part: feature:2307964-2308089:1:exon
so has part: feature:2308420-2308833:1:exon
so has part: feature:2312007-2312159:1:exon
so has part: feature:2314530-2314610:1:exon
so has part: feature:2316361-2317552:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2290464-2290551:1:exon

position:2290551:1
position: 2290551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2294951-2295297:1:exon

position:2294951:1
position: 2294951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2295297:1
position: 2295297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2304297-2304519:1:exon

position:2304297:1
position: 2304297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2304519:1
position: 2304519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2307964-2308089:1:exon

position:2307964:1
position: 2307964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2308089:1
position: 2308089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2308420-2308833:1:exon

position:2308420:1
position: 2308420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2308833:1
position: 2308833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2312007-2312159:1:exon

position:2312007:1
position: 2312007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2312159:1
position: 2312159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2314530-2314610:1:exon

position:2314530:1
position: 2314530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2314610:1
position: 2314610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2316361-2317552:1:exon

position:2316361:1
position: 2316361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MATN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: MATN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cartilage matrix protein
translation: MDRIFSALLLSLLLLLQSYTVCGAPLQPRGTLCRTKPTDLVFIIDSSRSVRPHEFEKIKVFVSRVIEGLDVGPNSTRVGLINYASAVKNEFSLKTYHTKAGLLQAVRRIEPLSTGTMTGLAIQFAISRAFSDSEGGRVRSPNFNKVAIVVTDGRPQDGVQDVAARARAAGIEIFAIGVGRVDMPTLRQIASQPLDDHVDYVESYSVIEKLTQKFQEAFCVVSDLCATGDHDCEQICVSTPGAYKCACKEGFTLNNDGKTCSACSGGLGSALDLVFLIDGSKSVRPENFELVKKFINQIVDSLEVSDKQAQVGLVQYSSSVRQEFPLGQFKNKKDIKAAVKKMSYMEKGTMTGQALKYLVDSSFASINGARPGVPKVGIVFTDGRSQDYITDAAKKAKDSGFRMFAVGVGNAVEDELREIASEPVAEHYFYTADFRTISKIGKKLQMKICVEEDPCECKSIVKFQTKVEDLINSLQQKLEALAKRIEALENKII
SIO_010081: MATN1
subclass of: SO_0000673
so part of: MATN1
location: join(2290464..2290551,2294951..2295297,2304297..2304519,2307964..2308089,2308420..2308833,2312007..2312159,2314530..2314610,2316361..2316410)
location: region:2290464-2316410:1
so has part: feature:2290464-2290551:1:exon
so has part: feature:2294951-2295297:1:exon
so has part: feature:2304297-2304519:1:exon
so has part: feature:2307964-2308089:1:exon
so has part: feature:2308420-2308833:1:exon
so has part: feature:2312007-2312159:1:exon
so has part: feature:2314530-2314610:1:exon
so has part: feature:2316361-2316410:1:exon

XP_032565918.1
type: Protein
SIO_000068: ncbiprotein

position:2316410:1
position: 2316410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2290464-2290551:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2294951-2295297:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2304297-2304519:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2307964-2308089:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2308420-2308833:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2312007-2312159:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2314530-2314610:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2316361-2316410:1:exon

LOC116798045
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116798045
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2337895..2339511
location: region:2337895-2339511:1
so has part: feature:2337895-2339511:1:exon
subclass of: SO_0000011

116798045
type: Gene
SIO_000068: ncbigene

position:2337895:1
position: 2337895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2339511:1
position: 2339511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2337895-2339511:1:exon

LOC116798045
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116798045
product: uncharacterized LOC116798045
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004360811.1
SIO_010081: LOC116798045
subclass of: SO_0000673
so part of: LOC116798045
location: join(2337895..2338166,2339155..2339511)
location: region:2337895-2339511:1
so has part: feature:2337895-2338166:1:exon
so has part: feature:2339155-2339511:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2337895-2338166:1:exon

position:2338166:1
position: 2338166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2339155-2339511:1:exon

position:2339155:1
position: 2339155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTPRU
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: PTPRU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2800096..2869078)
location: region:2800096-2869078:-1
so has part: feature:2800096-2869078:-1:exon
subclass of: SO_0000010

116797976
type: Gene
SIO_000068: ncbigene

position:2800096:-1
position: 2800096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2869078:-1
position: 2869078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2800096-2869078:-1:exon

PTPRU
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PTPRU
product: protein tyrosine phosphatase receptor type U, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 1 long SRA read, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032710018.1
SIO_010081: PTPRU
subclass of: SO_0000673
so part of: PTPRU
location: complement(join(2800096..2803037,2805513..2805648,2806770..2806927,2809658..2809783,2812260..2812400,2814874..2815047,2815152..2815301,2815404..2815539,2817014..2817168,2818148..2818264,2818359..2818456,2818782..2818818,2820340..2820416,2821307..2821379,2823494..2823684,2827074..2827231,2830566..2830704,2831215..2831251,2832897..2833170,2833580..2833682,2834549..2834750,2835066..2835175,2838786..2839094,2839691..2839984,2840936..2841110,2841213..2841328,2842194..2842275,2842350..2842621,2850571..2850699,2868974..2869078))
location: region:2800096-2869078:-1
so has part: feature:2868974-2869078:-1:exon
so has part: feature:2850571-2850699:-1:exon
so has part: feature:2842350-2842621:-1:exon
so has part: feature:2842194-2842275:-1:exon
so has part: feature:2841213-2841328:-1:exon
so has part: feature:2840936-2841110:-1:exon
so has part: feature:2839691-2839984:-1:exon
so has part: feature:2838786-2839094:-1:exon
so has part: feature:2835066-2835175:-1:exon
so has part: feature:2834549-2834750:-1:exon
so has part: feature:2833580-2833682:-1:exon
so has part: feature:2832897-2833170:-1:exon
so has part: feature:2831215-2831251:-1:exon
so has part: feature:2830566-2830704:-1:exon
so has part: feature:2827074-2827231:-1:exon
so has part: feature:2823494-2823684:-1:exon
so has part: feature:2821307-2821379:-1:exon
so has part: feature:2820340-2820416:-1:exon
so has part: feature:2818782-2818818:-1:exon
so has part: feature:2818359-2818456:-1:exon
so has part: feature:2818148-2818264:-1:exon
so has part: feature:2817014-2817168:-1:exon
so has part: feature:2815404-2815539:-1:exon
so has part: feature:2815152-2815301:-1:exon
so has part: feature:2814874-2815047:-1:exon
so has part: feature:2812260-2812400:-1:exon
so has part: feature:2809658-2809783:-1:exon
so has part: feature:2806770-2806927:-1:exon
so has part: feature:2805513-2805648:-1:exon
so has part: feature:2800096-2803037:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2868974-2869078:-1:exon

position:2868974:-1
position: 2868974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2850571-2850699:-1:exon

position:2850571:-1
position: 2850571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2850699:-1
position: 2850699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2842350-2842621:-1:exon

position:2842350:-1
position: 2842350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2842621:-1
position: 2842621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2842194-2842275:-1:exon

position:2842194:-1
position: 2842194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2842275:-1
position: 2842275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2841213-2841328:-1:exon

position:2841213:-1
position: 2841213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2841328:-1
position: 2841328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2840936-2841110:-1:exon

position:2840936:-1
position: 2840936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2841110:-1
position: 2841110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2839691-2839984:-1:exon

position:2839691:-1
position: 2839691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2839984:-1
position: 2839984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2838786-2839094:-1:exon

position:2838786:-1
position: 2838786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2839094:-1
position: 2839094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2835066-2835175:-1:exon

position:2835066:-1
position: 2835066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2835175:-1
position: 2835175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2834549-2834750:-1:exon

position:2834549:-1
position: 2834549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2834750:-1
position: 2834750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
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urn:…
SIO_000300: 15
SIO_000628: feature:2827074-2827231:-1:exon

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SIO_000628: feature:2823494-2823684:-1:exon

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urn:…
SIO_000300: 18
SIO_000628: feature:2820340-2820416:-1:exon

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SIO_000300: 19
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SIO_000300: 20
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SIO_000300: 21
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SIO_000300: 25
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SIO_000300: 26
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SIO_000300: 27
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SIO_000300: 29
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SIO_000300: 30
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PTPRU
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PTPRU
product: protein tyrosine phosphatase receptor type U, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032710017.1
SIO_010081: PTPRU
subclass of: SO_0000673
so part of: PTPRU
location: complement(join(2800096..2803037,2805513..2805648,2806770..2806927,2809658..2809783,2812260..2812400,2814874..2815047,2815152..2815301,2815404..2815539,2817014..2817168,2818148..2818264,2818359..2818456,2818782..2818818,2819623..2819640,2820340..2820416,2821307..2821379,2823494..2823684,2827074..2827231,2830566..2830704,2831215..2831251,2832897..2833170,2833580..2833682,2834549..2834750,2835066..2835175,2838786..2839094,2839691..2839984,2840936..2841110,2841213..2841328,2842194..2842275,2842350..2842621,2850571..2850699,2868974..2869078))
location: region:2800096-2869078:-1
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urn:…
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SIO_000628: feature:2821307-2821379:-1:exon

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SIO_000628: feature:2820340-2820416:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2819623-2819640:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 20
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SIO_000300: 21
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SIO_000628: feature:2817014-2817168:-1:exon

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SIO_000300: 25
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SIO_000300: 28
SIO_000628: feature:2809658-2809783:-1:exon

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SIO_000300: 29
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SIO_000300: 30
SIO_000628: feature:2805513-2805648:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2800096-2803037:-1:exon

PTPRU
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PTPRU
product: protein tyrosine phosphatase receptor type U, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032710016.1
SIO_010081: PTPRU
subclass of: SO_0000673
so part of: PTPRU
location: complement(join(2800096..2803037,2805513..2805648,2806770..2806927,2809658..2809783,2812260..2812400,2814874..2815047,2815152..2815301,2815404..2815539,2817014..2817168,2818148..2818264,2818359..2818456,2818782..2818818,2820340..2820416,2821307..2821379,2823494..2823684,2827074..2827231,2828518..2828547,2830566..2830704,2831215..2831251,2832897..2833170,2833580..2833682,2834549..2834750,2835066..2835175,2838786..2839094,2839691..2839984,2840936..2841110,2841213..2841328,2842194..2842275,2842350..2842621,2850571..2850699,2868974..2869078))
location: region:2800096-2869078:-1
so has part: feature:2868974-2869078:-1:exon
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urn:…
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SIO_000628: feature:2828518-2828547:-1:exon

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position:2828547:-1
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reference: sequence
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urn:…
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SIO_000628: feature:2827074-2827231:-1:exon

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SIO_000628: feature:2805513-2805648:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2800096-2803037:-1:exon

PTPRU
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PTPRU
product: protein tyrosine phosphatase receptor type U, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032710015.1
SIO_010081: PTPRU
subclass of: SO_0000673
so part of: PTPRU
location: complement(join(2800096..2803037,2805513..2805648,2806770..2806927,2809658..2809783,2812260..2812400,2814874..2815047,2815152..2815301,2815404..2815539,2817014..2817168,2818148..2818264,2818359..2818456,2818782..2818818,2819623..2819640,2820340..2820416,2821307..2821379,2823494..2823684,2827074..2827231,2828518..2828547,2830566..2830704,2831215..2831251,2832897..2833170,2833580..2833682,2834549..2834750,2835066..2835175,2838786..2839094,2839691..2839984,2840936..2841110,2841213..2841328,2842194..2842275,2842350..2842621,2850571..2850699,2868974..2869078))
location: region:2800096-2869078:-1
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urn:…
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urn:…
SIO_000300: 15
SIO_000628: feature:2828518-2828547:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2827074-2827231:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2823494-2823684:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2821307-2821379:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2820340-2820416:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2819623-2819640:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2818782-2818818:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2818359-2818456:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2818148-2818264:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2817014-2817168:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2815404-2815539:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2815152-2815301:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2814874-2815047:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2812260-2812400:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2809658-2809783:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2806770-2806927:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2805513-2805648:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2800096-2803037:-1:exon

PTPRU
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PTPRU
product: protein tyrosine phosphatase receptor type U, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032710019.1
SIO_010081: PTPRU
subclass of: SO_0000673
so part of: PTPRU
location: complement(join(2800096..2803037,2805513..2805648,2806770..2806927,2809658..2809783,2812260..2812400,2814874..2815047,2815152..2815301,2815404..2815539,2817014..2817168,2818148..2818264,2818359..2818456,2818782..2818818,2819623..2819640,2820340..2820416,2821307..2821379,2823494..2823684,2827074..2827231,2828518..2828547,2830566..2830704,2831215..2831251,2832897..2833170,2833580..2833682,2834549..2834750,2835066..2835175,2838786..2839094,2839691..2839984,2840936..2841110,2841213..2841328,2842194..2842275,2842361..2842621,2850571..2850699))
location: region:2800096-2850699:-1
so has part: feature:2850571-2850699:-1:exon
so has part: feature:2842361-2842621:-1:exon
so has part: feature:2842194-2842275:-1:exon
so has part: feature:2841213-2841328:-1:exon
so has part: feature:2840936-2841110:-1:exon
so has part: feature:2839691-2839984:-1:exon
so has part: feature:2838786-2839094:-1:exon
so has part: feature:2835066-2835175:-1:exon
so has part: feature:2834549-2834750:-1:exon
so has part: feature:2833580-2833682:-1:exon
so has part: feature:2832897-2833170:-1:exon
so has part: feature:2831215-2831251:-1:exon
so has part: feature:2830566-2830704:-1:exon
so has part: feature:2828518-2828547:-1:exon
so has part: feature:2827074-2827231:-1:exon
so has part: feature:2823494-2823684:-1:exon
so has part: feature:2821307-2821379:-1:exon
so has part: feature:2820340-2820416:-1:exon
so has part: feature:2819623-2819640:-1:exon
so has part: feature:2818782-2818818:-1:exon
so has part: feature:2818359-2818456:-1:exon
so has part: feature:2818148-2818264:-1:exon
so has part: feature:2817014-2817168:-1:exon
so has part: feature:2815404-2815539:-1:exon
so has part: feature:2815152-2815301:-1:exon
so has part: feature:2814874-2815047:-1:exon
so has part: feature:2812260-2812400:-1:exon
so has part: feature:2809658-2809783:-1:exon
so has part: feature:2806770-2806927:-1:exon
so has part: feature:2805513-2805648:-1:exon
so has part: feature:2800096-2803037:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2850571-2850699:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2842361-2842621:-1:exon

position:2842361:-1
position: 2842361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2842194-2842275:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2841213-2841328:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2840936-2841110:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2839691-2839984:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2838786-2839094:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2835066-2835175:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2834549-2834750:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2833580-2833682:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2832897-2833170:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2831215-2831251:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2830566-2830704:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2828518-2828547:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2827074-2827231:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2823494-2823684:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2821307-2821379:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2820340-2820416:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2819623-2819640:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2818782-2818818:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2818359-2818456:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2818148-2818264:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2817014-2817168:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2815404-2815539:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2815152-2815301:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2814874-2815047:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2812260-2812400:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2809658-2809783:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2806770-2806927:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2805513-2805648:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2800096-2803037:-1:exon

PTPRU
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PTPRU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-type tyrosine-protein phosphatase U isoform X4
translation: MRSARALLLALALRVYALDTETPAAGCTFEEDSDPNQCEYSQGEDDDFEWELIRSYLMPHLTPDLPHGSYLMVNSSQHAPGQKAHLLFQALSENDTHCLQFSYFMYSRDGHSPGTLSAYVRVTGGPVGSAVWNASGSHGRQWHQAELAVSLFWPSEYQVLFEAVVSGERRGYLGLDDILLLNYPCSKAPHFSRLGDVEVNAGQNATFQCVAAGKASEAERFLMQRQSGQAVPAASVKHISHRRFLATFQLDEVSKAQQDLYRCVTQSSRGSGVSNFAELIVKEPPTPIAPPQLLRAGSTYLIIQLNTNSIIGDGPIVRKEIEYHMTSGPWSEVHAVNMQTYKLWHLDPDTEYEISVLLTRPGEGGTGKPGPPLISRTKCAEPMRAPKGLAFSEIQSRQLTLQWEPLGYNLTRCHTYTVSLCYRYFVGSGHNQTFQECVKMERNANRYTIKNLLPYKNIHVKLILSNPEGRKEGKEVVFQTDEDVPGGIASESLTFTPLEDMIFLKWEEPVEPNGLITQYEISYQSIESSDPAVNVPGPRRTVSKLRNETYHVFSNLHPGTTYLFSVRARTGKGFGQTALTEITTNISAPTFDYGDMPSPLSESESTITVLLRPAQGRGAPISTYQVIVEEDRPKKLKRELGGPECFPVPLTFDDAVSRGSVHYFGAELPASSLTEAKPFTVGDNQTYSGYWNPPLEPKKAYLIYFQAMSNLKGETRLNCVRIARKAACKESKRPLEVSQHSEEMGLILGICAGGLIVLIILLGAIIVAIRKGKPVNMTKATINYRHEKTHMMSAIDRSFTDQSTLQEDERLGLSFMDTHNYGNRGDQRSSVVNESSSLLGGSPRRQCGRKGSPYHTGQLHPAVRVADLLQHINQMKTAEGYGFKQEYESFFEGWDASKKKDKTKGRQDHVSTYDRHRVKLHPLLGDPNSDYINANYIDGYHRSNHFIATQGPKQEMVYDFWRMVWQEHCSSIVMITKLVEVGRVKCSKYWPDDSEMYGDIKITLVESETLAEYAVRTFALERRGYSARHEVKQFHFMSWPEHGVPYHATGLLAFIRRVKASTPPDAGPIVIHCSAGTGRTGCYIVLDVMLDMAECEGVVDIYNCVKTLCSRRINMIQTEEQYIFIHDAILEACLCGETSIPASEFKPTYKEMVRIEPQSNSSQLREEFQTLNSVTPHLDVEECSIALLPRNRERNRSMDVLPPDRCLPFLISVDGDSNNYINAALTDSYTKSAAFIVTLHPLQNTTTDFWRLVYDYGCTSIVMLNQLNQSNSAWPCLQYWPEPGLQQYGPMEVEYVSGTADEDIVSRLFRVQNITRLQEGHLMVRHFQYLRWSAYRDTPDSKKSFLHLLAQVERWQKESGDGRTVVHCLNGGGRSGTFCASTMILEMIKCHNMADVFYAAKTLRNYKPNMVETLEQYHFCYDIALEYLESLETR
SIO_010081: PTPRU
subclass of: SO_0000673
so part of: PTPRU
location: complement(join(2802975..2803037,2805513..2805648,2806770..2806927,2809658..2809783,2812260..2812400,2814874..2815047,2815152..2815301,2815404..2815539,2817014..2817168,2818148..2818264,2818359..2818456,2818782..2818818,2820340..2820416,2821307..2821379,2823494..2823684,2827074..2827231,2830566..2830704,2831215..2831251,2832897..2833170,2833580..2833682,2834549..2834750,2835066..2835175,2838786..2839094,2839691..2839984,2840936..2841110,2841213..2841328,2842194..2842275,2842350..2842621,2850571..2850699,2868974..2869046))
location: region:2802975-2869046:-1
so has part: feature:2868974-2869046:-1:exon
so has part: feature:2850571-2850699:-1:exon
so has part: feature:2842350-2842621:-1:exon
so has part: feature:2842194-2842275:-1:exon
so has part: feature:2841213-2841328:-1:exon
so has part: feature:2840936-2841110:-1:exon
so has part: feature:2839691-2839984:-1:exon
so has part: feature:2838786-2839094:-1:exon
so has part: feature:2835066-2835175:-1:exon
so has part: feature:2834549-2834750:-1:exon
so has part: feature:2833580-2833682:-1:exon
so has part: feature:2832897-2833170:-1:exon
so has part: feature:2831215-2831251:-1:exon
so has part: feature:2830566-2830704:-1:exon
so has part: feature:2827074-2827231:-1:exon
so has part: feature:2823494-2823684:-1:exon
so has part: feature:2821307-2821379:-1:exon
so has part: feature:2820340-2820416:-1:exon
so has part: feature:2818782-2818818:-1:exon
so has part: feature:2818359-2818456:-1:exon
so has part: feature:2818148-2818264:-1:exon
so has part: feature:2817014-2817168:-1:exon
so has part: feature:2815404-2815539:-1:exon
so has part: feature:2815152-2815301:-1:exon
so has part: feature:2814874-2815047:-1:exon
so has part: feature:2812260-2812400:-1:exon
so has part: feature:2809658-2809783:-1:exon
so has part: feature:2806770-2806927:-1:exon
so has part: feature:2805513-2805648:-1:exon
so has part: feature:2802975-2803037:-1:exon

XP_032565909.1
type: Protein
SIO_000068: ncbiprotein

position:2802975:-1
position: 2802975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2869046:-1
position: 2869046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2868974-2869046:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2850571-2850699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2842350-2842621:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2842194-2842275:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2841213-2841328:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2840936-2841110:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2839691-2839984:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2838786-2839094:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2835066-2835175:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2834549-2834750:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2833580-2833682:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2832897-2833170:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2831215-2831251:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2830566-2830704:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2827074-2827231:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2823494-2823684:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2821307-2821379:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2820340-2820416:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2818782-2818818:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2818359-2818456:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2818148-2818264:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2817014-2817168:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2815404-2815539:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2815152-2815301:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2814874-2815047:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2812260-2812400:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2809658-2809783:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2806770-2806927:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2805513-2805648:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2802975-2803037:-1:exon

PTPRU
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PTPRU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-type tyrosine-protein phosphatase U isoform X3
translation: MRSARALLLALALRVYALDTETPAAGCTFEEDSDPNQCEYSQGEDDDFEWELIRSYLMPHLTPDLPHGSYLMVNSSQHAPGQKAHLLFQALSENDTHCLQFSYFMYSRDGHSPGTLSAYVRVTGGPVGSAVWNASGSHGRQWHQAELAVSLFWPSEYQVLFEAVVSGERRGYLGLDDILLLNYPCSKAPHFSRLGDVEVNAGQNATFQCVAAGKASEAERFLMQRQSGQAVPAASVKHISHRRFLATFQLDEVSKAQQDLYRCVTQSSRGSGVSNFAELIVKEPPTPIAPPQLLRAGSTYLIIQLNTNSIIGDGPIVRKEIEYHMTSGPWSEVHAVNMQTYKLWHLDPDTEYEISVLLTRPGEGGTGKPGPPLISRTKCAEPMRAPKGLAFSEIQSRQLTLQWEPLGYNLTRCHTYTVSLCYRYFVGSGHNQTFQECVKMERNANRYTIKNLLPYKNIHVKLILSNPEGRKEGKEVVFQTDEDVPGGIASESLTFTPLEDMIFLKWEEPVEPNGLITQYEISYQSIESSDPAVNVPGPRRTVSKLRNETYHVFSNLHPGTTYLFSVRARTGKGFGQTALTEITTNISAPTFDYGDMPSPLSESESTITVLLRPAQGRGAPISTYQVIVEEDRPKKLKRELGGPECFPVPLTFDDAVSRGSVHYFGAELPASSLTEAKPFTVGDNQTYSGYWNPPLEPKKAYLIYFQAMSNLKGETRLNCVRIARKAACKESKRPLEVSQHSEEMGLILGICAGGLIVLIILLGAIIVAIRKGKPVNMTKATINYRHEKTHMMSAIDRSFTDQSTLQEDERLGLSFMDTHNYGNRGDQRSSVVNESSSLLGGSPRRQCGRKGSPYHTGQLHPAVRVADLLQHINQMKTAEGYGFKQEYESFFEGWDASKKKDKTKGRQDHVSTYDRHRVKLHPLLGDPNSDYINANYIDIRINREGYHRSNHFIATQGPKQEMVYDFWRMVWQEHCSSIVMITKLVEVGRVKCSKYWPDDSEMYGDIKITLVESETLAEYAVRTFALERRGYSARHEVKQFHFMSWPEHGVPYHATGLLAFIRRVKASTPPDAGPIVIHCSAGTGRTGCYIVLDVMLDMAECEGVVDIYNCVKTLCSRRINMIQTEEQYIFIHDAILEACLCGETSIPASEFKPTYKEMVRIEPQSNSSQLREEFQTLNSVTPHLDVEECSIALLPRNRERNRSMDVLPPDRCLPFLISVDGDSNNYINAALTDSYTKSAAFIVTLHPLQNTTTDFWRLVYDYGCTSIVMLNQLNQSNSAWPCLQYWPEPGLQQYGPMEVEYVSGTADEDIVSRLFRVQNITRLQEGHLMVRHFQYLRWSAYRDTPDSKKSFLHLLAQVERWQKESGDGRTVVHCLNGGGRSGTFCASTMILEMIKCHNMADVFYAAKTLRNYKPNMVETLEQYHFCYDIALEYLESLETR
SIO_010081: PTPRU
subclass of: SO_0000673
so part of: PTPRU
location: complement(join(2802975..2803037,2805513..2805648,2806770..2806927,2809658..2809783,2812260..2812400,2814874..2815047,2815152..2815301,2815404..2815539,2817014..2817168,2818148..2818264,2818359..2818456,2818782..2818818,2819623..2819640,2820340..2820416,2821307..2821379,2823494..2823684,2827074..2827231,2830566..2830704,2831215..2831251,2832897..2833170,2833580..2833682,2834549..2834750,2835066..2835175,2838786..2839094,2839691..2839984,2840936..2841110,2841213..2841328,2842194..2842275,2842350..2842621,2850571..2850699,2868974..2869046))
location: region:2802975-2869046:-1
so has part: feature:2868974-2869046:-1:exon
so has part: feature:2850571-2850699:-1:exon
so has part: feature:2842350-2842621:-1:exon
so has part: feature:2842194-2842275:-1:exon
so has part: feature:2841213-2841328:-1:exon
so has part: feature:2840936-2841110:-1:exon
so has part: feature:2839691-2839984:-1:exon
so has part: feature:2838786-2839094:-1:exon
so has part: feature:2835066-2835175:-1:exon
so has part: feature:2834549-2834750:-1:exon
so has part: feature:2833580-2833682:-1:exon
so has part: feature:2832897-2833170:-1:exon
so has part: feature:2831215-2831251:-1:exon
so has part: feature:2830566-2830704:-1:exon
so has part: feature:2827074-2827231:-1:exon
so has part: feature:2823494-2823684:-1:exon
so has part: feature:2821307-2821379:-1:exon
so has part: feature:2820340-2820416:-1:exon
so has part: feature:2819623-2819640:-1:exon
so has part: feature:2818782-2818818:-1:exon
so has part: feature:2818359-2818456:-1:exon
so has part: feature:2818148-2818264:-1:exon
so has part: feature:2817014-2817168:-1:exon
so has part: feature:2815404-2815539:-1:exon
so has part: feature:2815152-2815301:-1:exon
so has part: feature:2814874-2815047:-1:exon
so has part: feature:2812260-2812400:-1:exon
so has part: feature:2809658-2809783:-1:exon
so has part: feature:2806770-2806927:-1:exon
so has part: feature:2805513-2805648:-1:exon
so has part: feature:2802975-2803037:-1:exon

XP_032565908.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2868974-2869046:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2850571-2850699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2842350-2842621:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2842194-2842275:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2841213-2841328:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2840936-2841110:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2839691-2839984:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2838786-2839094:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2835066-2835175:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2834549-2834750:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2833580-2833682:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2832897-2833170:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2831215-2831251:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2830566-2830704:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2827074-2827231:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2823494-2823684:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2821307-2821379:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2820340-2820416:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2819623-2819640:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2818782-2818818:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2818359-2818456:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2818148-2818264:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2817014-2817168:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2815404-2815539:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2815152-2815301:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2814874-2815047:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2812260-2812400:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2809658-2809783:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2806770-2806927:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2805513-2805648:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2802975-2803037:-1:exon

PTPRU
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PTPRU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-type tyrosine-protein phosphatase U isoform X2
translation: MRSARALLLALALRVYALDTETPAAGCTFEEDSDPNQCEYSQGEDDDFEWELIRSYLMPHLTPDLPHGSYLMVNSSQHAPGQKAHLLFQALSENDTHCLQFSYFMYSRDGHSPGTLSAYVRVTGGPVGSAVWNASGSHGRQWHQAELAVSLFWPSEYQVLFEAVVSGERRGYLGLDDILLLNYPCSKAPHFSRLGDVEVNAGQNATFQCVAAGKASEAERFLMQRQSGQAVPAASVKHISHRRFLATFQLDEVSKAQQDLYRCVTQSSRGSGVSNFAELIVKEPPTPIAPPQLLRAGSTYLIIQLNTNSIIGDGPIVRKEIEYHMTSGPWSEVHAVNMQTYKLWHLDPDTEYEISVLLTRPGEGGTGKPGPPLISRTKCAEPMRAPKGLAFSEIQSRQLTLQWEPLGYNLTRCHTYTVSLCYRYFVGSGHNQTFQECVKMERNANRYTIKNLLPYKNIHVKLILSNPEGRKEGKEVVFQTDEDVPGGIASESLTFTPLEDMIFLKWEEPVEPNGLITQYEISYQSIESSDPAVNVPGPRRTVSKLRNETYHVFSNLHPGTTYLFSVRARTGKGFGQTALTEITTNISAPTFDYGDMPSPLSESESTITVLLRPAQGRGAPISTYQVIVEEDRPKKLKRELGGPECFPVPLTFDDAVSRGSVHYFGAELPASSLTEAKPFTVGDNQTYSGYWNPPLEPKKAYLIYFQAMSNLKGETRLNCVRIARKAACKESKRPLEVSQHSEEMGLILGICAGGLIVLIILLGAIIVAIRKGRNYYSYSYYPKPVNMTKATINYRHEKTHMMSAIDRSFTDQSTLQEDERLGLSFMDTHNYGNRGDQRSSVVNESSSLLGGSPRRQCGRKGSPYHTGQLHPAVRVADLLQHINQMKTAEGYGFKQEYESFFEGWDASKKKDKTKGRQDHVSTYDRHRVKLHPLLGDPNSDYINANYIDGYHRSNHFIATQGPKQEMVYDFWRMVWQEHCSSIVMITKLVEVGRVKCSKYWPDDSEMYGDIKITLVESETLAEYAVRTFALERRGYSARHEVKQFHFMSWPEHGVPYHATGLLAFIRRVKASTPPDAGPIVIHCSAGTGRTGCYIVLDVMLDMAECEGVVDIYNCVKTLCSRRINMIQTEEQYIFIHDAILEACLCGETSIPASEFKPTYKEMVRIEPQSNSSQLREEFQTLNSVTPHLDVEECSIALLPRNRERNRSMDVLPPDRCLPFLISVDGDSNNYINAALTDSYTKSAAFIVTLHPLQNTTTDFWRLVYDYGCTSIVMLNQLNQSNSAWPCLQYWPEPGLQQYGPMEVEYVSGTADEDIVSRLFRVQNITRLQEGHLMVRHFQYLRWSAYRDTPDSKKSFLHLLAQVERWQKESGDGRTVVHCLNGGGRSGTFCASTMILEMIKCHNMADVFYAAKTLRNYKPNMVETLEQYHFCYDIALEYLESLETR
SIO_010081: PTPRU
subclass of: SO_0000673
so part of: PTPRU
location: complement(join(2802975..2803037,2805513..2805648,2806770..2806927,2809658..2809783,2812260..2812400,2814874..2815047,2815152..2815301,2815404..2815539,2817014..2817168,2818148..2818264,2818359..2818456,2818782..2818818,2820340..2820416,2821307..2821379,2823494..2823684,2827074..2827231,2828518..2828547,2830566..2830704,2831215..2831251,2832897..2833170,2833580..2833682,2834549..2834750,2835066..2835175,2838786..2839094,2839691..2839984,2840936..2841110,2841213..2841328,2842194..2842275,2842350..2842621,2850571..2850699,2868974..2869046))
location: region:2802975-2869046:-1
so has part: feature:2868974-2869046:-1:exon
so has part: feature:2850571-2850699:-1:exon
so has part: feature:2842350-2842621:-1:exon
so has part: feature:2842194-2842275:-1:exon
so has part: feature:2841213-2841328:-1:exon
so has part: feature:2840936-2841110:-1:exon
so has part: feature:2839691-2839984:-1:exon
so has part: feature:2838786-2839094:-1:exon
so has part: feature:2835066-2835175:-1:exon
so has part: feature:2834549-2834750:-1:exon
so has part: feature:2833580-2833682:-1:exon
so has part: feature:2832897-2833170:-1:exon
so has part: feature:2831215-2831251:-1:exon
so has part: feature:2830566-2830704:-1:exon
so has part: feature:2828518-2828547:-1:exon
so has part: feature:2827074-2827231:-1:exon
so has part: feature:2823494-2823684:-1:exon
so has part: feature:2821307-2821379:-1:exon
so has part: feature:2820340-2820416:-1:exon
so has part: feature:2818782-2818818:-1:exon
so has part: feature:2818359-2818456:-1:exon
so has part: feature:2818148-2818264:-1:exon
so has part: feature:2817014-2817168:-1:exon
so has part: feature:2815404-2815539:-1:exon
so has part: feature:2815152-2815301:-1:exon
so has part: feature:2814874-2815047:-1:exon
so has part: feature:2812260-2812400:-1:exon
so has part: feature:2809658-2809783:-1:exon
so has part: feature:2806770-2806927:-1:exon
so has part: feature:2805513-2805648:-1:exon
so has part: feature:2802975-2803037:-1:exon

XP_032565907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2868974-2869046:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2850571-2850699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2842350-2842621:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2842194-2842275:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2841213-2841328:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2840936-2841110:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2839691-2839984:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2838786-2839094:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2835066-2835175:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2834549-2834750:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2833580-2833682:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2832897-2833170:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2831215-2831251:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2830566-2830704:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2828518-2828547:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2827074-2827231:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2823494-2823684:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2821307-2821379:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2820340-2820416:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2818782-2818818:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2818359-2818456:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2818148-2818264:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2817014-2817168:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2815404-2815539:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2815152-2815301:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2814874-2815047:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2812260-2812400:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2809658-2809783:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2806770-2806927:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2805513-2805648:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2802975-2803037:-1:exon

PTPRU
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PTPRU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-type tyrosine-protein phosphatase U isoform X1
translation: MRSARALLLALALRVYALDTETPAAGCTFEEDSDPNQCEYSQGEDDDFEWELIRSYLMPHLTPDLPHGSYLMVNSSQHAPGQKAHLLFQALSENDTHCLQFSYFMYSRDGHSPGTLSAYVRVTGGPVGSAVWNASGSHGRQWHQAELAVSLFWPSEYQVLFEAVVSGERRGYLGLDDILLLNYPCSKAPHFSRLGDVEVNAGQNATFQCVAAGKASEAERFLMQRQSGQAVPAASVKHISHRRFLATFQLDEVSKAQQDLYRCVTQSSRGSGVSNFAELIVKEPPTPIAPPQLLRAGSTYLIIQLNTNSIIGDGPIVRKEIEYHMTSGPWSEVHAVNMQTYKLWHLDPDTEYEISVLLTRPGEGGTGKPGPPLISRTKCAEPMRAPKGLAFSEIQSRQLTLQWEPLGYNLTRCHTYTVSLCYRYFVGSGHNQTFQECVKMERNANRYTIKNLLPYKNIHVKLILSNPEGRKEGKEVVFQTDEDVPGGIASESLTFTPLEDMIFLKWEEPVEPNGLITQYEISYQSIESSDPAVNVPGPRRTVSKLRNETYHVFSNLHPGTTYLFSVRARTGKGFGQTALTEITTNISAPTFDYGDMPSPLSESESTITVLLRPAQGRGAPISTYQVIVEEDRPKKLKRELGGPECFPVPLTFDDAVSRGSVHYFGAELPASSLTEAKPFTVGDNQTYSGYWNPPLEPKKAYLIYFQAMSNLKGETRLNCVRIARKAACKESKRPLEVSQHSEEMGLILGICAGGLIVLIILLGAIIVAIRKGRNYYSYSYYPKPVNMTKATINYRHEKTHMMSAIDRSFTDQSTLQEDERLGLSFMDTHNYGNRGDQRSSVVNESSSLLGGSPRRQCGRKGSPYHTGQLHPAVRVADLLQHINQMKTAEGYGFKQEYESFFEGWDASKKKDKTKGRQDHVSTYDRHRVKLHPLLGDPNSDYINANYIDIRINREGYHRSNHFIATQGPKQEMVYDFWRMVWQEHCSSIVMITKLVEVGRVKCSKYWPDDSEMYGDIKITLVESETLAEYAVRTFALERRGYSARHEVKQFHFMSWPEHGVPYHATGLLAFIRRVKASTPPDAGPIVIHCSAGTGRTGCYIVLDVMLDMAECEGVVDIYNCVKTLCSRRINMIQTEEQYIFIHDAILEACLCGETSIPASEFKPTYKEMVRIEPQSNSSQLREEFQTLNSVTPHLDVEECSIALLPRNRERNRSMDVLPPDRCLPFLISVDGDSNNYINAALTDSYTKSAAFIVTLHPLQNTTTDFWRLVYDYGCTSIVMLNQLNQSNSAWPCLQYWPEPGLQQYGPMEVEYVSGTADEDIVSRLFRVQNITRLQEGHLMVRHFQYLRWSAYRDTPDSKKSFLHLLAQVERWQKESGDGRTVVHCLNGGGRSGTFCASTMILEMIKCHNMADVFYAAKTLRNYKPNMVETLEQYHFCYDIALEYLESLETR
SIO_010081: PTPRU
subclass of: SO_0000673
so part of: PTPRU
location: complement(join(2802975..2803037,2805513..2805648,2806770..2806927,2809658..2809783,2812260..2812400,2814874..2815047,2815152..2815301,2815404..2815539,2817014..2817168,2818148..2818264,2818359..2818456,2818782..2818818,2819623..2819640,2820340..2820416,2821307..2821379,2823494..2823684,2827074..2827231,2828518..2828547,2830566..2830704,2831215..2831251,2832897..2833170,2833580..2833682,2834549..2834750,2835066..2835175,2838786..2839094,2839691..2839984,2840936..2841110,2841213..2841328,2842194..2842275,2842350..2842621,2850571..2850699,2868974..2869046))
location: region:2802975-2869046:-1
so has part: feature:2868974-2869046:-1:exon
so has part: feature:2850571-2850699:-1:exon
so has part: feature:2842350-2842621:-1:exon
so has part: feature:2842194-2842275:-1:exon
so has part: feature:2841213-2841328:-1:exon
so has part: feature:2840936-2841110:-1:exon
so has part: feature:2839691-2839984:-1:exon
so has part: feature:2838786-2839094:-1:exon
so has part: feature:2835066-2835175:-1:exon
so has part: feature:2834549-2834750:-1:exon
so has part: feature:2833580-2833682:-1:exon
so has part: feature:2832897-2833170:-1:exon
so has part: feature:2831215-2831251:-1:exon
so has part: feature:2830566-2830704:-1:exon
so has part: feature:2828518-2828547:-1:exon
so has part: feature:2827074-2827231:-1:exon
so has part: feature:2823494-2823684:-1:exon
so has part: feature:2821307-2821379:-1:exon
so has part: feature:2820340-2820416:-1:exon
so has part: feature:2819623-2819640:-1:exon
so has part: feature:2818782-2818818:-1:exon
so has part: feature:2818359-2818456:-1:exon
so has part: feature:2818148-2818264:-1:exon
so has part: feature:2817014-2817168:-1:exon
so has part: feature:2815404-2815539:-1:exon
so has part: feature:2815152-2815301:-1:exon
so has part: feature:2814874-2815047:-1:exon
so has part: feature:2812260-2812400:-1:exon
so has part: feature:2809658-2809783:-1:exon
so has part: feature:2806770-2806927:-1:exon
so has part: feature:2805513-2805648:-1:exon
so has part: feature:2802975-2803037:-1:exon

XP_032565906.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2868974-2869046:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2850571-2850699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2842350-2842621:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2842194-2842275:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2841213-2841328:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2840936-2841110:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2839691-2839984:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2838786-2839094:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2835066-2835175:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2834549-2834750:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2833580-2833682:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2832897-2833170:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2831215-2831251:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2830566-2830704:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2828518-2828547:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2827074-2827231:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2823494-2823684:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2821307-2821379:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2820340-2820416:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2819623-2819640:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2818782-2818818:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2818359-2818456:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2818148-2818264:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2817014-2817168:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2815404-2815539:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2815152-2815301:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2814874-2815047:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2812260-2812400:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2809658-2809783:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2806770-2806927:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2805513-2805648:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2802975-2803037:-1:exon

PTPRU
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PTPRU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-type tyrosine-protein phosphatase U isoform X5
translation: MTPTACSSATSCTAGTGTALAPSAPTCGSRGARWAAPSGTPRAPTAASGTRQSWLSACSGPVLFEAVVSGERRGYLGLDDILLLNYPCSKAPHFSRLGDVEVNAGQNATFQCVAAGKASEAERFLMQRQSGQAVPAASVKHISHRRFLATFQLDEVSKAQQDLYRCVTQSSRGSGVSNFAELIVKEPPTPIAPPQLLRAGSTYLIIQLNTNSIIGDGPIVRKEIEYHMTSGPWSEVHAVNMQTYKLWHLDPDTEYEISVLLTRPGEGGTGKPGPPLISRTKCAEPMRAPKGLAFSEIQSRQLTLQWEPLGYNLTRCHTYTVSLCYRYFVGSGHNQTFQECVKMERNANRYTIKNLLPYKNIHVKLILSNPEGRKEGKEVVFQTDEDVPGGIASESLTFTPLEDMIFLKWEEPVEPNGLITQYEISYQSIESSDPAVNVPGPRRTVSKLRNETYHVFSNLHPGTTYLFSVRARTGKGFGQTALTEITTNISAPTFDYGDMPSPLSESESTITVLLRPAQGRGAPISTYQVIVEEDRPKKLKRELGGPECFPVPLTFDDAVSRGSVHYFGAELPASSLTEAKPFTVGDNQTYSGYWNPPLEPKKAYLIYFQAMSNLKGETRLNCVRIARKAACKESKRPLEVSQHSEEMGLILGICAGGLIVLIILLGAIIVAIRKGRNYYSYSYYPKPVNMTKATINYRHEKTHMMSAIDRSFTDQSTLQEDERLGLSFMDTHNYGNRGDQRSSVVNESSSLLGGSPRRQCGRKGSPYHTGQLHPAVRVADLLQHINQMKTAEGYGFKQEYESFFEGWDASKKKDKTKGRQDHVSTYDRHRVKLHPLLGDPNSDYINANYIDIRINREGYHRSNHFIATQGPKQEMVYDFWRMVWQEHCSSIVMITKLVEVGRVKCSKYWPDDSEMYGDIKITLVESETLAEYAVRTFALERRGYSARHEVKQFHFMSWPEHGVPYHATGLLAFIRRVKASTPPDAGPIVIHCSAGTGRTGCYIVLDVMLDMAECEGVVDIYNCVKTLCSRRINMIQTEEQYIFIHDAILEACLCGETSIPASEFKPTYKEMVRIEPQSNSSQLREEFQTLNSVTPHLDVEECSIALLPRNRERNRSMDVLPPDRCLPFLISVDGDSNNYINAALTDSYTKSAAFIVTLHPLQNTTTDFWRLVYDYGCTSIVMLNQLNQSNSAWPCLQYWPEPGLQQYGPMEVEYVSGTADEDIVSRLFRVQNITRLQEGHLMVRHFQYLRWSAYRDTPDSKKSFLHLLAQVERWQKESGDGRTVVHCLNGGGRSGTFCASTMILEMIKCHNMADVFYAAKTLRNYKPNMVETLEQYHFCYDIALEYLESLETR
SIO_010081: PTPRU
subclass of: SO_0000673
so part of: PTPRU
location: complement(join(2802975..2803037,2805513..2805648,2806770..2806927,2809658..2809783,2812260..2812400,2814874..2815047,2815152..2815301,2815404..2815539,2817014..2817168,2818148..2818264,2818359..2818456,2818782..2818818,2819623..2819640,2820340..2820416,2821307..2821379,2823494..2823684,2827074..2827231,2828518..2828547,2830566..2830704,2831215..2831251,2832897..2833170,2833580..2833682,2834549..2834750,2835066..2835175,2838786..2839094,2839691..2839984,2840936..2841110,2841213..2841328,2842194..2842275,2842361..2842543))
location: region:2802975-2842543:-1
so has part: feature:2842361-2842543:-1:exon
so has part: feature:2842194-2842275:-1:exon
so has part: feature:2841213-2841328:-1:exon
so has part: feature:2840936-2841110:-1:exon
so has part: feature:2839691-2839984:-1:exon
so has part: feature:2838786-2839094:-1:exon
so has part: feature:2835066-2835175:-1:exon
so has part: feature:2834549-2834750:-1:exon
so has part: feature:2833580-2833682:-1:exon
so has part: feature:2832897-2833170:-1:exon
so has part: feature:2831215-2831251:-1:exon
so has part: feature:2830566-2830704:-1:exon
so has part: feature:2828518-2828547:-1:exon
so has part: feature:2827074-2827231:-1:exon
so has part: feature:2823494-2823684:-1:exon
so has part: feature:2821307-2821379:-1:exon
so has part: feature:2820340-2820416:-1:exon
so has part: feature:2819623-2819640:-1:exon
so has part: feature:2818782-2818818:-1:exon
so has part: feature:2818359-2818456:-1:exon
so has part: feature:2818148-2818264:-1:exon
so has part: feature:2817014-2817168:-1:exon
so has part: feature:2815404-2815539:-1:exon
so has part: feature:2815152-2815301:-1:exon
so has part: feature:2814874-2815047:-1:exon
so has part: feature:2812260-2812400:-1:exon
so has part: feature:2809658-2809783:-1:exon
so has part: feature:2806770-2806927:-1:exon
so has part: feature:2805513-2805648:-1:exon
so has part: feature:2802975-2803037:-1:exon

XP_032565910.1
type: Protein
SIO_000068: ncbiprotein

position:2842543:-1
position: 2842543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2842361-2842543:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2842194-2842275:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2841213-2841328:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2840936-2841110:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2839691-2839984:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2838786-2839094:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2835066-2835175:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2834549-2834750:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2833580-2833682:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2832897-2833170:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2831215-2831251:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2830566-2830704:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2828518-2828547:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2827074-2827231:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2823494-2823684:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2821307-2821379:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2820340-2820416:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2819623-2819640:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2818782-2818818:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2818359-2818456:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2818148-2818264:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2817014-2817168:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2815404-2815539:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2815152-2815301:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2814874-2815047:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2812260-2812400:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2809658-2809783:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2806770-2806927:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2805513-2805648:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2802975-2803037:-1:exon

MECR
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: MECR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2881581..2889873
location: region:2881581-2889873:1
so has part: feature:2881581-2889873:1:exon
subclass of: SO_0000010

116797872
type: Gene
SIO_000068: ncbigene

position:2881581:1
position: 2881581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2889873:1
position: 2889873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2881581-2889873:1:exon

MECR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: MECR
product: mitochondrial trans-2-enoyl-CoA reductase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 14 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032709766.1
SIO_010081: MECR
subclass of: SO_0000673
so part of: MECR
location: join(2881581..2881860,2883471..2883568,2884534..2884665,2886111..2886254,2886340..2886442,2886814..2886916,2887344..2887417,2887835..2887895,2888676..2888748,2889042..2889873)
location: region:2881581-2889873:1
so has part: feature:2881581-2881860:1:exon
so has part: feature:2883471-2883568:1:exon
so has part: feature:2884534-2884665:1:exon
so has part: feature:2886111-2886254:1:exon
so has part: feature:2886340-2886442:1:exon
so has part: feature:2886814-2886916:1:exon
so has part: feature:2887344-2887417:1:exon
so has part: feature:2887835-2887895:1:exon
so has part: feature:2888676-2888748:1:exon
so has part: feature:2889042-2889873:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2881581-2881860:1:exon

position:2881860:1
position: 2881860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2883471-2883568:1:exon

position:2883471:1
position: 2883471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2883568:1
position: 2883568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2884534-2884665:1:exon

position:2884534:1
position: 2884534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2884665:1
position: 2884665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2886111-2886254:1:exon

position:2886111:1
position: 2886111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2886254:1
position: 2886254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2886340-2886442:1:exon

position:2886340:1
position: 2886340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2886442:1
position: 2886442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2886814-2886916:1:exon

position:2886814:1
position: 2886814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2886916:1
position: 2886916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2887344-2887417:1:exon

position:2887344:1
position: 2887344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2887417:1
position: 2887417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2887835-2887895:1:exon

position:2887835:1
position: 2887835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2887895:1
position: 2887895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2888676-2888748:1:exon

position:2888676:1
position: 2888676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2888748:1
position: 2888748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2889042-2889873:1:exon

position:2889042:1
position: 2889042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MECR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: MECR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: enoyl-[acyl-carrier-protein] reductase, mitochondrial
translation: MQRAAARVLRGARSPPVRTPPVRTPPVRARSASAGSAPRGLVYERHGEPPSVVQLKDLEVPNLGDSDVHVKMLAAPINPADINMIQGTYAILTPLPAVGGNEGVGEVLEVGSRVSALKPGDWVIPADTGLGTWRTRGVFPEEKLLKVPSDIPVLCAATLSVNPCTALRMLTDFETLAPGDSIIQNAANSGVGQAVIQIARASGIKTINVVRDRPDLPQLVERLMALGADHVVTEEMLRKPEMKEIFKSTPKPRLALNCVGGKSTTEMLRHLQPRGTMVTYGGMAKQPVMVPVSAFIFRDVRLRGFWMTQWRKDHAQDQESVAGMMDTLCQLIQRGQLTAPASTEVPLQDYRAALEASMKPFVSSKQILLL
SIO_010081: MECR
subclass of: SO_0000673
so part of: MECR
location: join(2881700..2881860,2883471..2883568,2884534..2884665,2886111..2886254,2886340..2886442,2886814..2886916,2887344..2887417,2887835..2887895,2888676..2888748,2889042..2889205)
location: region:2881700-2889205:1
so has part: feature:2881700-2881860:1:exon
so has part: feature:2883471-2883568:1:exon
so has part: feature:2884534-2884665:1:exon
so has part: feature:2886111-2886254:1:exon
so has part: feature:2886340-2886442:1:exon
so has part: feature:2886814-2886916:1:exon
so has part: feature:2887344-2887417:1:exon
so has part: feature:2887835-2887895:1:exon
so has part: feature:2888676-2888748:1:exon
so has part: feature:2889042-2889205:1:exon

XP_032565657.1
type: Protein
SIO_000068: ncbiprotein

position:2881700:1
position: 2881700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2889205:1
position: 2889205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2881700-2881860:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2883471-2883568:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2884534-2884665:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2886111-2886254:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2886340-2886442:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2886814-2886916:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2887344-2887417:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2887835-2887895:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2888676-2888748:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2889042-2889205:1:exon

LOC116797873
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116797873
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2889815..2891613)
location: region:2889815-2891613:-1
so has part: feature:2889815-2891613:-1:exon
subclass of: SO_0000010

116797873
type: Gene
SIO_000068: ncbigene

position:2889815:-1
position: 2889815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2891613:-1
position: 2891613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2889815-2891613:-1:exon

LOC116797873
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116797873
product: heat shock transcription factor, X-linked-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032709768.1
SIO_010081: LOC116797873
subclass of: SO_0000673
so part of: LOC116797873
location: complement(join(2889815..2890520,2890944..2891613))
location: region:2889815-2891613:-1
so has part: feature:2890944-2891613:-1:exon
so has part: feature:2889815-2890520:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2890944-2891613:-1:exon

position:2890944:-1
position: 2890944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2889815-2890520:-1:exon

position:2890520:-1
position: 2890520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116797873
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116797873
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock transcription factor, X-linked-like
translation: MEMSSPETSCAPSPEEPAWWVAQAPHAGDDTGLSWDAAAGPPTDKITLRDWQDEPRDPKVKFCSLKISVNTKPSDDSFLETLWEILSSQSFESIWWGNDGNCIVIGEKLFRKEVLGRRGPRKIFEAESMRGFLLQLMFHGFRRMEGDSPLLTSMEELRAVAAAGAELGKLLFYSNPHFTRDNPSCHRRGVESAGESLTPPAVSPSATGKKAELPWKRWWDVQLAAGAEEEEEDDDTQTSTSTSPEPGADTPTQLGSARPSPPKRPRRCSPAGTQEAAPAPSTASLPWLTPPALNRPLAVPTLPSGQPNPGAMRVPGAGLAPLCAPGFGMDSVGSPPGHAPAHSHCPTCSCGGNSGARPHQGQDWEGQRS
SIO_010081: LOC116797873
subclass of: SO_0000673
so part of: LOC116797873
location: complement(join(2889918..2890520,2890944..2891450))
location: region:2889918-2891450:-1
so has part: feature:2890944-2891450:-1:exon
so has part: feature:2889918-2890520:-1:exon

XP_032565659.1
type: Protein
SIO_000068: ncbiprotein

position:2889918:-1
position: 2889918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2891450:-1
position: 2891450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2890944-2891450:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2889918-2890520:-1:exon

SRSF4
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: SRSF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2894056..2905114
location: region:2894056-2905114:1
so has part: feature:2894056-2905114:1:exon
subclass of: SO_0000010

116797871
type: Gene
SIO_000068: ncbigene

position:2894056:1
position: 2894056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2905114:1
position: 2905114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2894056-2905114:1:exon

SRSF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SRSF4
product: serine and arginine rich splicing factor 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 43 ESTs, 3 long SRA reads, 21 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_032709765.1
SIO_010081: SRSF4
subclass of: SO_0000673
so part of: SRSF4
location: join(2894056..2894228,2899640..2899782,2900674..2900786,2902466..2902680,2903446..2903529,2903691..2905114)
location: region:2894056-2905114:1
so has part: feature:2894056-2894228:1:exon
so has part: feature:2899640-2899782:1:exon
so has part: feature:2900674-2900786:1:exon
so has part: feature:2902466-2902680:1:exon
so has part: feature:2903446-2903529:1:exon
so has part: feature:2903691-2905114:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2894056-2894228:1:exon

position:2894228:1
position: 2894228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2899640-2899782:1:exon

position:2899640:1
position: 2899640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2899782:1
position: 2899782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2900674-2900786:1:exon

position:2900674:1
position: 2900674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2900786:1
position: 2900786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2902466-2902680:1:exon

position:2902466:1
position: 2902466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2902680:1
position: 2902680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2903446-2903529:1:exon

position:2903446:1
position: 2903446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2903529:1
position: 2903529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2903691-2905114:1:exon

position:2903691:1
position: 2903691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SRSF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SRSF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor 4
translation: MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDSSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFKSYSDMKRALEKLDGTEVNGRKIRLVEDRPGSRRRRSYSRSRSHSRSRSRSRHSHKSRSRSASSSRSKSRSRSRSVSRSRSKSRSRSKSRSRGQKEKSRTPSKEDKSRSRSRSAEKSRNKSKDKSEGALHNSEEKAKSRSPSKEKSRSRSGSKDRGEARESMRSRSKEKSRSKDREKSISKARSRSKSRDESRSRSHSKDKRKSRKRSRDDSRSRSRSRSKSEKSRRRSKRDKASSKKKRKDSHERSRSGSKEKEHLKGESDKKEAKGEGEDAVSRSRSRSISKSKPNVKSDSRSRSKSVSKPRSRSKSRSRSASRSRSRSRSRSRSRS
SIO_010081: SRSF4
subclass of: SO_0000673
so part of: SRSF4
location: join(2894122..2894228,2899640..2899782,2900674..2900786,2902466..2902680,2903446..2903529,2903691..2904459)
location: region:2894122-2904459:1
so has part: feature:2894122-2894228:1:exon
so has part: feature:2899640-2899782:1:exon
so has part: feature:2900674-2900786:1:exon
so has part: feature:2902466-2902680:1:exon
so has part: feature:2903446-2903529:1:exon
so has part: feature:2903691-2904459:1:exon

XP_032565656.1
type: Protein
SIO_000068: ncbiprotein

position:2894122:1
position: 2894122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2904459:1
position: 2904459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2894122-2894228:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2899640-2899782:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2900674-2900786:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2902466-2902680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2903446-2903529:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2903691-2904459:1:exon

LOC116797870
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116797870
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2908957..2949990
location: region:2908957-2949990:1
so has part: feature:2908957-2949990:1:exon
subclass of: SO_0000010

116797870
type: Gene
SIO_000068: ncbigene

position:2908957:1
position: 2908957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2949990:1
position: 2949990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2908957-2949990:1:exon

LOC116797870
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116797870
product: lethal(3)malignant brain tumor-like protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032709760.1
SIO_010081: LOC116797870
subclass of: SO_0000673
so part of: LOC116797870
location: join(2908957..2909024,2918516..2918624,2918937..2919045,2920486..2920543,2921584..2921672,2922816..2922920,2923247..2923382,2923867..2923958,2924897..2925048,2925850..2925926,2927272..2927357,2930925..2931035,2932188..2932302,2932408..2932507,2933228..2933407,2933813..2933851,2934674..2934805,2935209..2935270,2937643..2937809,2942296..2942358,2945966..2949990)
location: region:2908957-2949990:1
so has part: feature:2908957-2909024:1:exon
so has part: feature:2918516-2918624:1:exon
so has part: feature:2918937-2919045:1:exon
so has part: feature:2920486-2920543:1:exon
so has part: feature:2921584-2921672:1:exon
so has part: feature:2922816-2922920:1:exon
so has part: feature:2923247-2923382:1:exon
so has part: feature:2923867-2923958:1:exon
so has part: feature:2924897-2925048:1:exon
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so has part: feature:2927272-2927357:1:exon
so has part: feature:2930925-2931035:1:exon
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so has part: feature:2932408-2932507:1:exon
so has part: feature:2933228-2933407:1:exon
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so has part: feature:2934674-2934805:1:exon
so has part: feature:2935209-2935270:1:exon
so has part: feature:2937643-2937809:1:exon
so has part: feature:2942296-2942358:1:exon
so has part: feature:2945966-2949990:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2908957-2909024:1:exon

position:2909024:1
position: 2909024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2918516-2918624:1:exon

position:2918516:1
position: 2918516
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type: ForwardStrandPosition
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position:2918624:1
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urn:…
SIO_000300: 3
SIO_000628: feature:2918937-2919045:1:exon

position:2918937:1
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reference: sequence
type: ForwardStrandPosition
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position:2919045:1
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urn:…
SIO_000300: 4
SIO_000628: feature:2920486-2920543:1:exon

position:2920486:1
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reference: sequence
type: ForwardStrandPosition
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position:2920543:1
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urn:…
SIO_000300: 5
SIO_000628: feature:2921584-2921672:1:exon

position:2921584:1
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reference: sequence
type: ForwardStrandPosition
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position:2921672:1
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urn:…
SIO_000300: 6
SIO_000628: feature:2922816-2922920:1:exon

position:2922816:1
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reference: sequence
type: ForwardStrandPosition
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position:2922920:1
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urn:…
SIO_000300: 7
SIO_000628: feature:2923247-2923382:1:exon

position:2923247:1
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type: ForwardStrandPosition
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position:2923382:1
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urn:…
SIO_000300: 8
SIO_000628: feature:2923867-2923958:1:exon

position:2923867:1
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reference: sequence
type: ForwardStrandPosition
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position:2923958:1
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reference: sequence
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urn:…
SIO_000300: 9
SIO_000628: feature:2924897-2925048:1:exon

position:2924897:1
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reference: sequence
type: ForwardStrandPosition
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position:2925048:1
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urn:…
SIO_000300: 10
SIO_000628: feature:2925850-2925926:1:exon

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reference: sequence
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position:2925926:1
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urn:…
SIO_000300: 11
SIO_000628: feature:2927272-2927357:1:exon

position:2927272:1
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reference: sequence
type: ForwardStrandPosition
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position:2927357:1
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reference: sequence
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urn:…
SIO_000300: 12
SIO_000628: feature:2930925-2931035:1:exon

position:2930925:1
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reference: sequence
type: ForwardStrandPosition
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position:2931035:1
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urn:…
SIO_000300: 13
SIO_000628: feature:2932188-2932302:1:exon

position:2932188:1
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reference: sequence
type: ForwardStrandPosition
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position:2932302:1
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urn:…
SIO_000300: 14
SIO_000628: feature:2932408-2932507:1:exon

position:2932408:1
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reference: sequence
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position:2932507:1
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urn:…
SIO_000300: 15
SIO_000628: feature:2933228-2933407:1:exon

position:2933228:1
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reference: sequence
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position:2933407:1
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urn:…
SIO_000300: 16
SIO_000628: feature:2933813-2933851:1:exon

position:2933813:1
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reference: sequence
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position:2933851:1
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urn:…
SIO_000300: 17
SIO_000628: feature:2934674-2934805:1:exon

position:2934674:1
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reference: sequence
type: ForwardStrandPosition
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position:2934805:1
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urn:…
SIO_000300: 18
SIO_000628: feature:2935209-2935270:1:exon

position:2935209:1
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reference: sequence
type: ForwardStrandPosition
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position:2935270:1
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reference: sequence
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urn:…
SIO_000300: 19
SIO_000628: feature:2937643-2937809:1:exon

position:2937643:1
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reference: sequence
type: ForwardStrandPosition
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position:2937809:1
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urn:…
SIO_000300: 20
SIO_000628: feature:2942296-2942358:1:exon

position:2942296:1
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reference: sequence
type: ForwardStrandPosition
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position:2942358:1
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reference: sequence
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urn:…
SIO_000300: 21
SIO_000628: feature:2945966-2949990:1:exon

position:2945966:1
position: 2945966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116797870
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116797870
product: lethal(3)malignant brain tumor-like protein 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032709762.1
SIO_010081: LOC116797870
subclass of: SO_0000673
so part of: LOC116797870
location: join(2908957..2909024,2918516..2918624,2918937..2919045,2920486..2920543,2921584..2921672,2922816..2922920,2923247..2923382,2923867..2923958,2924897..2925048,2925850..2925926,2927272..2927357,2930925..2931035,2932188..2932302,2932408..2932507,2933228..2933407,2933813..2933851,2934674..2934805,2935209..2935270,2937643..2937809,2942296..2942358,2945969..2949990)
location: region:2908957-2949990:1
so has part: feature:2908957-2909024:1:exon
so has part: feature:2918516-2918624:1:exon
so has part: feature:2918937-2919045:1:exon
so has part: feature:2920486-2920543:1:exon
so has part: feature:2921584-2921672:1:exon
so has part: feature:2922816-2922920:1:exon
so has part: feature:2923247-2923382:1:exon
so has part: feature:2923867-2923958:1:exon
so has part: feature:2924897-2925048:1:exon
so has part: feature:2925850-2925926:1:exon
so has part: feature:2927272-2927357:1:exon
so has part: feature:2930925-2931035:1:exon
so has part: feature:2932188-2932302:1:exon
so has part: feature:2932408-2932507:1:exon
so has part: feature:2933228-2933407:1:exon
so has part: feature:2933813-2933851:1:exon
so has part: feature:2934674-2934805:1:exon
so has part: feature:2935209-2935270:1:exon
so has part: feature:2937643-2937809:1:exon
so has part: feature:2942296-2942358:1:exon
so has part: feature:2945969-2949990:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2908957-2909024:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2918516-2918624:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2918937-2919045:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2920486-2920543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2921584-2921672:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2922816-2922920:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2923247-2923382:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2923867-2923958:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2924897-2925048:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2925850-2925926:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2927272-2927357:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2930925-2931035:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2932188-2932302:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2932408-2932507:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2933228-2933407:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2933813-2933851:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2934674-2934805:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2935209-2935270:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2937643-2937809:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2942296-2942358:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2945969-2949990:1:exon

position:2945969:1
position: 2945969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116797870
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116797870
product: lethal(3)malignant brain tumor-like protein 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032709763.1
SIO_010081: LOC116797870
subclass of: SO_0000673
so part of: LOC116797870
location: join(2908957..2909024,2918516..2918624,2918937..2919045,2920486..2920543,2921584..2921672,2922816..2922920,2923247..2923382,2923867..2923958,2924897..2925048,2925850..2925926,2927272..2927357,2930925..2931035,2932188..2932302,2932408..2932507,2933228..2933407,2934674..2934805,2935209..2935270,2937643..2937809,2942296..2942358,2945966..2949990)
location: region:2908957-2949990:1
so has part: feature:2908957-2909024:1:exon
so has part: feature:2918516-2918624:1:exon
so has part: feature:2918937-2919045:1:exon
so has part: feature:2920486-2920543:1:exon
so has part: feature:2921584-2921672:1:exon
so has part: feature:2922816-2922920:1:exon
so has part: feature:2923247-2923382:1:exon
so has part: feature:2923867-2923958:1:exon
so has part: feature:2924897-2925048:1:exon
so has part: feature:2925850-2925926:1:exon
so has part: feature:2927272-2927357:1:exon
so has part: feature:2930925-2931035:1:exon
so has part: feature:2932188-2932302:1:exon
so has part: feature:2932408-2932507:1:exon
so has part: feature:2933228-2933407:1:exon
so has part: feature:2934674-2934805:1:exon
so has part: feature:2935209-2935270:1:exon
so has part: feature:2937643-2937809:1:exon
so has part: feature:2942296-2942358:1:exon
so has part: feature:2945966-2949990:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2908957-2909024:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2918516-2918624:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2918937-2919045:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2920486-2920543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2921584-2921672:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2922816-2922920:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2923247-2923382:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2923867-2923958:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2924897-2925048:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2925850-2925926:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2927272-2927357:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2930925-2931035:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2932188-2932302:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2932408-2932507:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2933228-2933407:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2934674-2934805:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2935209-2935270:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2937643-2937809:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2942296-2942358:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2945966-2949990:1:exon

LOC116797870
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116797870
product: lethal(3)malignant brain tumor-like protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032709761.1
SIO_010081: LOC116797870
subclass of: SO_0000673
so part of: LOC116797870
location: join(2908957..2909024,2918516..2918624,2918940..2919045,2920486..2920543,2921584..2921672,2922816..2922920,2923247..2923382,2923867..2923958,2924897..2925048,2925850..2925926,2927272..2927357,2930925..2931035,2932188..2932302,2932408..2932507,2933228..2933407,2933813..2933851,2934674..2934805,2935209..2935270,2937643..2937809,2942296..2942358,2945966..2949990)
location: region:2908957-2949990:1
so has part: feature:2908957-2909024:1:exon
so has part: feature:2918516-2918624:1:exon
so has part: feature:2918940-2919045:1:exon
so has part: feature:2920486-2920543:1:exon
so has part: feature:2921584-2921672:1:exon
so has part: feature:2922816-2922920:1:exon
so has part: feature:2923247-2923382:1:exon
so has part: feature:2923867-2923958:1:exon
so has part: feature:2924897-2925048:1:exon
so has part: feature:2925850-2925926:1:exon
so has part: feature:2927272-2927357:1:exon
so has part: feature:2930925-2931035:1:exon
so has part: feature:2932188-2932302:1:exon
so has part: feature:2932408-2932507:1:exon
so has part: feature:2933228-2933407:1:exon
so has part: feature:2933813-2933851:1:exon
so has part: feature:2934674-2934805:1:exon
so has part: feature:2935209-2935270:1:exon
so has part: feature:2937643-2937809:1:exon
so has part: feature:2942296-2942358:1:exon
so has part: feature:2945966-2949990:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2908957-2909024:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2918516-2918624:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2918940-2919045:1:exon

position:2918940:1
position: 2918940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2920486-2920543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2921584-2921672:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2922816-2922920:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2923247-2923382:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2923867-2923958:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2924897-2925048:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2925850-2925926:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2927272-2927357:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2930925-2931035:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2932188-2932302:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2932408-2932507:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2933228-2933407:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2933813-2933851:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2934674-2934805:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2935209-2935270:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2937643-2937809:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2942296-2942358:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2945966-2949990:1:exon

LOC116797870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116797870
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lethal(3)malignant brain tumor-like protein 4 isoform X1
translation: MDCFENGKFCTQTGSQQHRDSSGCQVTEAGRPVRRLRRKRRLPLDSEDEEENAYEDEEKNKSNNMKSRRNTKPIKQVLPGKKKVWNWVSYLEEEQMPAAPLKLFREYQSFPQGRNGFKVGMKLEGLDPEHPSRFCVLTVAEIQGYRMRLHFDGYPECYDFWANADSSDIHPVGWCEKTSHKLLPPKGFKEGEFNWTSYLKNCKAQAAPKSLFKTLSTPVTPSGFRLGMKLEAVDKKNPSLICVATITDMVDNRLLIHFDNWDESYDYWCETSSPYIRPVGYCQETGTPLTTPPGYKDPKAFSWEKYLEETNSQAAPARAFKVRPAHGFQVNMKLEAVDRRNPILIRVATIVDKDNHRIKIHFDGWDPHYDFWVDADSPDIHPVGWCAKTGHALQVPLGAEDPEGAVGQVCPTPGCHGIGHVRGPRYGTHYTLVGCPYSDVNLSRENSLQDRLSGERPSPGNTMQKAKRLETPAPFLLGAGESSQGESPQSRKTLELSNIEANCVKAAPDSEKWCQSSVHTPSEQSENSQERDWGEEDSSADIKATPKTLGCSRAYIKFQLVKQESNGKGPDLDLQQALHQSIFMPSLASNPTHRLHLFWEQHCRLLPEVSGLTAKQVAKWTVEEVVSFIQRLPGCKEQASVFREEQIDGEAFLLLKQNDIVKILSIKLGPALKIYNAILMFKSAEDN
SIO_010081: LOC116797870
subclass of: SO_0000673
so part of: LOC116797870
location: join(2918563..2918624,2918937..2919045,2920486..2920543,2921584..2921672,2922816..2922920,2923247..2923382,2923867..2923958,2924897..2925048,2925850..2925926,2927272..2927357,2930925..2931035,2932188..2932302,2932408..2932507,2933228..2933407,2933813..2933851,2934674..2934805,2935209..2935270,2937643..2937809,2942296..2942358,2945966..2946094)
location: region:2918563-2946094:1
so has part: feature:2918563-2918624:1:exon
so has part: feature:2918937-2919045:1:exon
so has part: feature:2920486-2920543:1:exon
so has part: feature:2921584-2921672:1:exon
so has part: feature:2922816-2922920:1:exon
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so has part: feature:2927272-2927357:1:exon
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so has part: feature:2933813-2933851:1:exon
so has part: feature:2934674-2934805:1:exon
so has part: feature:2935209-2935270:1:exon
so has part: feature:2937643-2937809:1:exon
so has part: feature:2942296-2942358:1:exon
so has part: feature:2945966-2946094:1:exon

XP_032565651.1
type: Protein
SIO_000068: ncbiprotein

position:2918563:1
position: 2918563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2946094:1
position: 2946094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2918563-2918624:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2918937-2919045:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2920486-2920543:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2921584-2921672:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2922816-2922920:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2923247-2923382:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2923867-2923958:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2924897-2925048:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2925850-2925926:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2927272-2927357:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2930925-2931035:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2932188-2932302:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2932408-2932507:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2933228-2933407:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2933813-2933851:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2934674-2934805:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2935209-2935270:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2937643-2937809:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2942296-2942358:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2945966-2946094:1:exon

LOC116797870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116797870
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lethal(3)malignant brain tumor-like protein 4 isoform X3
translation: MDCFENGKFCTQTGSQQHRDSSGCQVTEAGRPVRRLRRKRRLPLDSEDEEENAYEDEEKNKSNNMKSRRNTKPIKQVLPGKKKVWNWVSYLEEEQMPAAPLKLFREYQSFPQGRNGFKVGMKLEGLDPEHPSRFCVLTVAEIQGYRMRLHFDGYPECYDFWANADSSDIHPVGWCEKTSHKLLPPKGFKEGEFNWTSYLKNCKAQAAPKSLFKTLSTPVTPSGFRLGMKLEAVDKKNPSLICVATITDMVDNRLLIHFDNWDESYDYWCETSSPYIRPVGYCQETGTPLTTPPGYKDPKAFSWEKYLEETNSQAAPARAFKVRPAHGFQVNMKLEAVDRRNPILIRVATIVDKDNHRIKIHFDGWDPHYDFWVDADSPDIHPVGWCAKTGHALQVPLGAEDPEGAVGQVCPTPGCHGIGHVRGPRYGTHYTLVGCPYSDVNLSRENSLQDRLSGERPSPGNTMQKAKRLETPAPFLLGAGESSQGESPQSRKTLELSNIEANCVKAAPDSEKWCQSSVHTPSEQSENSQERDWGEEDSSADIKATPKTLGCSRAYIKFQLVKQESNGKGPDLDLQQALHQSIFMPSLASNPTHRLHLFWEQHCRLLPEVSGLTAKQVAKWTVEEVVSFIQRLPGCKEQASVFREEIDGEAFLLLKQNDIVKILSIKLGPALKIYNAILMFKSAEDN
SIO_010081: LOC116797870
subclass of: SO_0000673
so part of: LOC116797870
location: join(2918563..2918624,2918937..2919045,2920486..2920543,2921584..2921672,2922816..2922920,2923247..2923382,2923867..2923958,2924897..2925048,2925850..2925926,2927272..2927357,2930925..2931035,2932188..2932302,2932408..2932507,2933228..2933407,2933813..2933851,2934674..2934805,2935209..2935270,2937643..2937809,2942296..2942358,2945969..2946094)
location: region:2918563-2946094:1
so has part: feature:2918563-2918624:1:exon
so has part: feature:2918937-2919045:1:exon
so has part: feature:2920486-2920543:1:exon
so has part: feature:2921584-2921672:1:exon
so has part: feature:2922816-2922920:1:exon
so has part: feature:2923247-2923382:1:exon
so has part: feature:2923867-2923958:1:exon
so has part: feature:2924897-2925048:1:exon
so has part: feature:2925850-2925926:1:exon
so has part: feature:2927272-2927357:1:exon
so has part: feature:2930925-2931035:1:exon
so has part: feature:2932188-2932302:1:exon
so has part: feature:2932408-2932507:1:exon
so has part: feature:2933228-2933407:1:exon
so has part: feature:2933813-2933851:1:exon
so has part: feature:2934674-2934805:1:exon
so has part: feature:2935209-2935270:1:exon
so has part: feature:2937643-2937809:1:exon
so has part: feature:2942296-2942358:1:exon
so has part: feature:2945969-2946094:1:exon

XP_032565653.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2918563-2918624:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2918937-2919045:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2920486-2920543:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2921584-2921672:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2922816-2922920:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2923247-2923382:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2923867-2923958:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2924897-2925048:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2925850-2925926:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2927272-2927357:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2930925-2931035:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2932188-2932302:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2932408-2932507:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2933228-2933407:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2933813-2933851:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2934674-2934805:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2935209-2935270:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2937643-2937809:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2942296-2942358:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2945969-2946094:1:exon

LOC116797870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116797870
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lethal(3)malignant brain tumor-like protein 3 isoform X4
translation: MDCFENGKFCTQTGSQQHRDSSGCQVTEAGRPVRRLRRKRRLPLDSEDEEENAYEDEEKNKSNNMKSRRNTKPIKQVLPGKKKVWNWVSYLEEEQMPAAPLKLFREYQSFPQGRNGFKVGMKLEGLDPEHPSRFCVLTVAEIQGYRMRLHFDGYPECYDFWANADSSDIHPVGWCEKTSHKLLPPKGFKEGEFNWTSYLKNCKAQAAPKSLFKTLSTPVTPSGFRLGMKLEAVDKKNPSLICVATITDMVDNRLLIHFDNWDESYDYWCETSSPYIRPVGYCQETGTPLTTPPGYKDPKAFSWEKYLEETNSQAAPARAFKVRPAHGFQVNMKLEAVDRRNPILIRVATIVDKDNHRIKIHFDGWDPHYDFWVDADSPDIHPVGWCAKTGHALQVPLGAEDPEGAVGQVCPTPGCHGIGHVRGPRYGTHYTLVGCPYSDVNLSRENSLQDRLSGERPSPGNTMQKAKRLETPAPFLLGAGESSQGESPQSRKAAPDSEKWCQSSVHTPSEQSENSQERDWGEEDSSADIKATPKTLGCSRAYIKFQLVKQESNGKGPDLDLQQALHQSIFMPSLASNPTHRLHLFWEQHCRLLPEVSGLTAKQVAKWTVEEVVSFIQRLPGCKEQASVFREEQIDGEAFLLLKQNDIVKILSIKLGPALKIYNAILMFKSAEDN
SIO_010081: LOC116797870
subclass of: SO_0000673
so part of: LOC116797870
location: join(2918563..2918624,2918937..2919045,2920486..2920543,2921584..2921672,2922816..2922920,2923247..2923382,2923867..2923958,2924897..2925048,2925850..2925926,2927272..2927357,2930925..2931035,2932188..2932302,2932408..2932507,2933228..2933407,2934674..2934805,2935209..2935270,2937643..2937809,2942296..2942358,2945966..2946094)
location: region:2918563-2946094:1
so has part: feature:2918563-2918624:1:exon
so has part: feature:2918937-2919045:1:exon
so has part: feature:2920486-2920543:1:exon
so has part: feature:2921584-2921672:1:exon
so has part: feature:2922816-2922920:1:exon
so has part: feature:2923247-2923382:1:exon
so has part: feature:2923867-2923958:1:exon
so has part: feature:2924897-2925048:1:exon
so has part: feature:2925850-2925926:1:exon
so has part: feature:2927272-2927357:1:exon
so has part: feature:2930925-2931035:1:exon
so has part: feature:2932188-2932302:1:exon
so has part: feature:2932408-2932507:1:exon
so has part: feature:2933228-2933407:1:exon
so has part: feature:2934674-2934805:1:exon
so has part: feature:2935209-2935270:1:exon
so has part: feature:2937643-2937809:1:exon
so has part: feature:2942296-2942358:1:exon
so has part: feature:2945966-2946094:1:exon

XP_032565654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2918563-2918624:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2918937-2919045:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2920486-2920543:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2921584-2921672:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2922816-2922920:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2923247-2923382:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2923867-2923958:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2924897-2925048:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2925850-2925926:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2927272-2927357:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2930925-2931035:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2932188-2932302:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2932408-2932507:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2933228-2933407:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2934674-2934805:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2935209-2935270:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2937643-2937809:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2942296-2942358:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2945966-2946094:1:exon

LOC116797870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116797870
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lethal(3)malignant brain tumor-like protein 4 isoform X2
translation: MDCFENGKFCTQTGSQQHRDSGCQVTEAGRPVRRLRRKRRLPLDSEDEEENAYEDEEKNKSNNMKSRRNTKPIKQVLPGKKKVWNWVSYLEEEQMPAAPLKLFREYQSFPQGRNGFKVGMKLEGLDPEHPSRFCVLTVAEIQGYRMRLHFDGYPECYDFWANADSSDIHPVGWCEKTSHKLLPPKGFKEGEFNWTSYLKNCKAQAAPKSLFKTLSTPVTPSGFRLGMKLEAVDKKNPSLICVATITDMVDNRLLIHFDNWDESYDYWCETSSPYIRPVGYCQETGTPLTTPPGYKDPKAFSWEKYLEETNSQAAPARAFKVRPAHGFQVNMKLEAVDRRNPILIRVATIVDKDNHRIKIHFDGWDPHYDFWVDADSPDIHPVGWCAKTGHALQVPLGAEDPEGAVGQVCPTPGCHGIGHVRGPRYGTHYTLVGCPYSDVNLSRENSLQDRLSGERPSPGNTMQKAKRLETPAPFLLGAGESSQGESPQSRKTLELSNIEANCVKAAPDSEKWCQSSVHTPSEQSENSQERDWGEEDSSADIKATPKTLGCSRAYIKFQLVKQESNGKGPDLDLQQALHQSIFMPSLASNPTHRLHLFWEQHCRLLPEVSGLTAKQVAKWTVEEVVSFIQRLPGCKEQASVFREEQIDGEAFLLLKQNDIVKILSIKLGPALKIYNAILMFKSAEDN
SIO_010081: LOC116797870
subclass of: SO_0000673
so part of: LOC116797870
location: join(2918563..2918624,2918940..2919045,2920486..2920543,2921584..2921672,2922816..2922920,2923247..2923382,2923867..2923958,2924897..2925048,2925850..2925926,2927272..2927357,2930925..2931035,2932188..2932302,2932408..2932507,2933228..2933407,2933813..2933851,2934674..2934805,2935209..2935270,2937643..2937809,2942296..2942358,2945966..2946094)
location: region:2918563-2946094:1
so has part: feature:2918563-2918624:1:exon
so has part: feature:2918940-2919045:1:exon
so has part: feature:2920486-2920543:1:exon
so has part: feature:2921584-2921672:1:exon
so has part: feature:2922816-2922920:1:exon
so has part: feature:2923247-2923382:1:exon
so has part: feature:2923867-2923958:1:exon
so has part: feature:2924897-2925048:1:exon
so has part: feature:2925850-2925926:1:exon
so has part: feature:2927272-2927357:1:exon
so has part: feature:2930925-2931035:1:exon
so has part: feature:2932188-2932302:1:exon
so has part: feature:2932408-2932507:1:exon
so has part: feature:2933228-2933407:1:exon
so has part: feature:2933813-2933851:1:exon
so has part: feature:2934674-2934805:1:exon
so has part: feature:2935209-2935270:1:exon
so has part: feature:2937643-2937809:1:exon
so has part: feature:2942296-2942358:1:exon
so has part: feature:2945966-2946094:1:exon

XP_032565652.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2918563-2918624:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2918940-2919045:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2920486-2920543:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2921584-2921672:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2922816-2922920:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2923247-2923382:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2923867-2923958:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2924897-2925048:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2925850-2925926:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2927272-2927357:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2930925-2931035:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2932188-2932302:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2932408-2932507:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2933228-2933407:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2933813-2933851:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2934674-2934805:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2935209-2935270:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2937643-2937809:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2942296-2942358:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2945966-2946094:1:exon

LOC116797870
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116797870
product: lethal(3)malignant brain tumor-like protein 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032709764.1
SIO_010081: LOC116797870
subclass of: SO_0000673
so part of: LOC116797870
location: join(2918958..2919045,2921584..2921672,2922816..2922920,2923247..2923382,2923867..2923958,2924897..2925048,2925850..2925926,2927272..2927357,2930925..2931035,2932188..2932302,2932408..2932507,2933228..2933407,2933813..2933851,2934674..2934805,2935209..2935270,2937643..2937809,2942296..2942358,2945966..2949990)
location: region:2918958-2949990:1
so has part: feature:2918958-2919045:1:exon
so has part: feature:2921584-2921672:1:exon
so has part: feature:2922816-2922920:1:exon
so has part: feature:2923247-2923382:1:exon
so has part: feature:2923867-2923958:1:exon
so has part: feature:2924897-2925048:1:exon
so has part: feature:2925850-2925926:1:exon
so has part: feature:2927272-2927357:1:exon
so has part: feature:2930925-2931035:1:exon
so has part: feature:2932188-2932302:1:exon
so has part: feature:2932408-2932507:1:exon
so has part: feature:2933228-2933407:1:exon
so has part: feature:2933813-2933851:1:exon
so has part: feature:2934674-2934805:1:exon
so has part: feature:2935209-2935270:1:exon
so has part: feature:2937643-2937809:1:exon
so has part: feature:2942296-2942358:1:exon
so has part: feature:2945966-2949990:1:exon

position:2918958:1
position: 2918958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2918958-2919045:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2921584-2921672:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2922816-2922920:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2923247-2923382:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2923867-2923958:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2924897-2925048:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2925850-2925926:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2927272-2927357:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2930925-2931035:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2932188-2932302:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2932408-2932507:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2933228-2933407:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2933813-2933851:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2934674-2934805:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2935209-2935270:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2937643-2937809:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2942296-2942358:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2945966-2949990:1:exon

LOC116797870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116797870
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lethal(3)malignant brain tumor-like protein 3 isoform X5
translation: MPAAPLKLFREYQSFPQGRNGFKVGMKLEGLDPEHPSRFCVLTVAEIQGYRMRLHFDGYPECYDFWANADSSDIHPVGWCEKTSHKLLPPKGFKEGEFNWTSYLKNCKAQAAPKSLFKTLSTPVTPSGFRLGMKLEAVDKKNPSLICVATITDMVDNRLLIHFDNWDESYDYWCETSSPYIRPVGYCQETGTPLTTPPGYKDPKAFSWEKYLEETNSQAAPARAFKVRPAHGFQVNMKLEAVDRRNPILIRVATIVDKDNHRIKIHFDGWDPHYDFWVDADSPDIHPVGWCAKTGHALQVPLGAEDPEGAVGQVCPTPGCHGIGHVRGPRYGTHYTLVGCPYSDVNLSRENSLQDRLSGERPSPGNTMQKAKRLETPAPFLLGAGESSQGESPQSRKTLELSNIEANCVKAAPDSEKWCQSSVHTPSEQSENSQERDWGEEDSSADIKATPKTLGCSRAYIKFQLVKQESNGKGPDLDLQQALHQSIFMPSLASNPTHRLHLFWEQHCRLLPEVSGLTAKQVAKWTVEEVVSFIQRLPGCKEQASVFREEQIDGEAFLLLKQNDIVKILSIKLGPALKIYNAILMFKSAEDN
SIO_010081: LOC116797870
subclass of: SO_0000673
so part of: LOC116797870
location: join(2921640..2921672,2922816..2922920,2923247..2923382,2923867..2923958,2924897..2925048,2925850..2925926,2927272..2927357,2930925..2931035,2932188..2932302,2932408..2932507,2933228..2933407,2933813..2933851,2934674..2934805,2935209..2935270,2937643..2937809,2942296..2942358,2945966..2946094)
location: region:2921640-2946094:1
so has part: feature:2921640-2921672:1:exon
so has part: feature:2922816-2922920:1:exon
so has part: feature:2923247-2923382:1:exon
so has part: feature:2923867-2923958:1:exon
so has part: feature:2924897-2925048:1:exon
so has part: feature:2925850-2925926:1:exon
so has part: feature:2927272-2927357:1:exon
so has part: feature:2930925-2931035:1:exon
so has part: feature:2932188-2932302:1:exon
so has part: feature:2932408-2932507:1:exon
so has part: feature:2933228-2933407:1:exon
so has part: feature:2933813-2933851:1:exon
so has part: feature:2934674-2934805:1:exon
so has part: feature:2935209-2935270:1:exon
so has part: feature:2937643-2937809:1:exon
so has part: feature:2942296-2942358:1:exon
so has part: feature:2945966-2946094:1:exon

XP_032565655.1
type: Protein
SIO_000068: ncbiprotein

position:2921640:1
position: 2921640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2921640-2921672:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2922816-2922920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2923247-2923382:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2923867-2923958:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2924897-2925048:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2925850-2925926:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2927272-2927357:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2930925-2931035:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2932188-2932302:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2932408-2932507:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2933228-2933407:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2933813-2933851:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2934674-2934805:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2935209-2935270:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2937643-2937809:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2942296-2942358:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2945966-2946094:1:exon

TMEM200B
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: TMEM200B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2977447..2979739
location: region:2977447-2979739:1
so has part: feature:2977447-2979739:1:exon
subclass of: SO_0000010

116797983
type: Gene
SIO_000068: ncbigene

position:2977447:1
position: 2977447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2979739:1
position: 2979739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2977447-2979739:1:exon

TMEM200B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: TMEM200B
product: transmembrane protein 200B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032710028.1
SIO_010081: TMEM200B
subclass of: SO_0000673
so part of: TMEM200B
location: 2977447..2979739
location: region:2977447-2979739:1
so has part: feature:2977447-2979739:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2977447-2979739:1:exon

TMEM200B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: TMEM200B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 200B
translation: MTVESTETNGPLREPELGGPKAPVPPVPSRRRGRRLRRKSPPESPVKGQLRMRSPAGAFVMVGISVVLVGMTIAVVGYWPHRGHGGTGAGAGNASVAGDTRREAAAARHGPHSEKLKLIGPVIMGIGLFIFICANTMLYENRDMETRRLMQKGLYGMAGGLPEGAGPEDGRCQHGDGPKANAECVEGCYQVDLSCQPCPGPGSKWSDCYGPNRLQAMAEFLQHPAGSPAASLHSLRSGASAEANLCLPRRAGAESLLCSAVGTLALPVIKLNNCLLDAAARGAGGRVGPAEHPPETPRPSRAPLSVGESVTACGQDCGGGGGGGGGGGGGGGGGGHTVIDMDGGCPAAELVAADLSPDAQLHTPGHSKSLDLGRPGVLLVAPMKDRKNRSWPRLDHVSLAGYAKLESTGESSDRLLEPSEPPSRAEPRPSSWVVGTEQGTQV
SIO_010081: TMEM200B
subclass of: SO_0000673
so part of: TMEM200B
location: 2977628..2978956
location: region:2977628-2978956:1
so has part: feature:2977628-2978956:1:exon

XP_032565919.1
type: Protein
SIO_000068: ncbiprotein

position:2977628:1
position: 2977628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2978956:1
position: 2978956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2977628-2978956:1:exon

EPB41
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: EPB41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2985615..3071690)
location: region:2985615-3071690:-1
so has part: feature:2985615-3071690:-1:exon
subclass of: SO_0000010

116798130
type: Gene
SIO_000068: ncbigene

position:2985615:-1
position: 2985615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3071690:-1
position: 3071690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2985615-3071690:-1:exon

EPB41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: EPB41
product: erythrocyte membrane protein band 4.1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032710286.1
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
location: complement(join(2985615..2988944,2989867..2989974,2991882..2991962,2992397..2992498,2994050..2994178,2995322..2995801,3008888..3009067,3011960..3012022,3012822..3012866,3012979..3013035,3014777..3014985,3017643..3017771,3019055..3019171,3020772..3020944,3021765..3021862,3022531..3022683,3023167..3023254,3025640..3025858,3026318..3026393,3028457..3028499,3031363..3031467,3033789..3034019,3036627..3037086,3071619..3071686))
location: region:2985615-3071686:-1
so has part: feature:3071619-3071686:-1:exon
so has part: feature:3036627-3037086:-1:exon
so has part: feature:3033789-3034019:-1:exon
so has part: feature:3031363-3031467:-1:exon
so has part: feature:3028457-3028499:-1:exon
so has part: feature:3026318-3026393:-1:exon
so has part: feature:3025640-3025858:-1:exon
so has part: feature:3023167-3023254:-1:exon
so has part: feature:3022531-3022683:-1:exon
so has part: feature:3021765-3021862:-1:exon
so has part: feature:3020772-3020944:-1:exon
so has part: feature:3019055-3019171:-1:exon
so has part: feature:3017643-3017771:-1:exon
so has part: feature:3014777-3014985:-1:exon
so has part: feature:3012979-3013035:-1:exon
so has part: feature:3012822-3012866:-1:exon
so has part: feature:3011960-3012022:-1:exon
so has part: feature:3008888-3009067:-1:exon
so has part: feature:2995322-2995801:-1:exon
so has part: feature:2994050-2994178:-1:exon
so has part: feature:2992397-2992498:-1:exon
so has part: feature:2991882-2991962:-1:exon
so has part: feature:2989867-2989974:-1:exon
so has part: feature:2985615-2988944:-1:exon

position:3071686:-1
position: 3071686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3071619-3071686:-1:exon

position:3071619:-1
position: 3071619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3036627-3037086:-1:exon

position:3036627:-1
position: 3036627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3037086:-1
position: 3037086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3033789-3034019:-1:exon

position:3033789:-1
position: 3033789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3034019:-1
position: 3034019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3031363-3031467:-1:exon

position:3031363:-1
position: 3031363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3031467:-1
position: 3031467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3028457-3028499:-1:exon

position:3028457:-1
position: 3028457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3028499:-1
position: 3028499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3026318-3026393:-1:exon

position:3026318:-1
position: 3026318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3026393:-1
position: 3026393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3025640-3025858:-1:exon

position:3025640:-1
position: 3025640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3025858:-1
position: 3025858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3023167-3023254:-1:exon

position:3023167:-1
position: 3023167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3023254:-1
position: 3023254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3022531-3022683:-1:exon

position:3022531:-1
position: 3022531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3022683:-1
position: 3022683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3021765-3021862:-1:exon

position:3021765:-1
position: 3021765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3021862:-1
position: 3021862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3020772-3020944:-1:exon

position:3020772:-1
position: 3020772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3020944:-1
position: 3020944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3019055-3019171:-1:exon

position:3019055:-1
position: 3019055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3019171:-1
position: 3019171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3017643-3017771:-1:exon

position:3017643:-1
position: 3017643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3017771:-1
position: 3017771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3014777-3014985:-1:exon

position:3014777:-1
position: 3014777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3014985:-1
position: 3014985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3012979-3013035:-1:exon

position:3012979:-1
position: 3012979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3013035:-1
position: 3013035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3012822-3012866:-1:exon

position:3012822:-1
position: 3012822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3012866:-1
position: 3012866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3011960-3012022:-1:exon

position:3011960:-1
position: 3011960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3012022:-1
position: 3012022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3008888-3009067:-1:exon

position:3008888:-1
position: 3008888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3009067:-1
position: 3009067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2995322-2995801:-1:exon

position:2995322:-1
position: 2995322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2995801:-1
position: 2995801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2994050-2994178:-1:exon

position:2994050:-1
position: 2994050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2994178:-1
position: 2994178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2992397-2992498:-1:exon

position:2992397:-1
position: 2992397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2992498:-1
position: 2992498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2991882-2991962:-1:exon

position:2991882:-1
position: 2991882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2991962:-1
position: 2991962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2989867-2989974:-1:exon

position:2989867:-1
position: 2989867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2989974:-1
position: 2989974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2985615-2988944:-1:exon

position:2988944:-1
position: 2988944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EPB41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: EPB41
product: erythrocyte membrane protein band 4.1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032710288.1
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
location: complement(join(2985615..2988944,2989867..2989974,2991882..2991962,2992397..2992498,2994050..2994178,3007051..3007086,3008888..3009067,3011960..3012022,3012822..3012866,3012979..3013035,3014777..3014985,3017643..3017771,3019055..3019171,3020772..3020944,3021765..3021862,3022531..3022683,3023167..3023254,3025640..3025858,3026318..3026393,3028457..3028499,3031363..3031467,3033789..3034019,3036627..3037086,3071619..3071684))
location: region:2985615-3071684:-1
so has part: feature:3071619-3071684:-1:exon
so has part: feature:3036627-3037086:-1:exon
so has part: feature:3033789-3034019:-1:exon
so has part: feature:3031363-3031467:-1:exon
so has part: feature:3028457-3028499:-1:exon
so has part: feature:3026318-3026393:-1:exon
so has part: feature:3025640-3025858:-1:exon
so has part: feature:3023167-3023254:-1:exon
so has part: feature:3022531-3022683:-1:exon
so has part: feature:3021765-3021862:-1:exon
so has part: feature:3020772-3020944:-1:exon
so has part: feature:3019055-3019171:-1:exon
so has part: feature:3017643-3017771:-1:exon
so has part: feature:3014777-3014985:-1:exon
so has part: feature:3012979-3013035:-1:exon
so has part: feature:3012822-3012866:-1:exon
so has part: feature:3011960-3012022:-1:exon
so has part: feature:3008888-3009067:-1:exon
so has part: feature:3007051-3007086:-1:exon
so has part: feature:2994050-2994178:-1:exon
so has part: feature:2992397-2992498:-1:exon
so has part: feature:2991882-2991962:-1:exon
so has part: feature:2989867-2989974:-1:exon
so has part: feature:2985615-2988944:-1:exon

position:3071684:-1
position: 3071684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3071619-3071684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3036627-3037086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3033789-3034019:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3031363-3031467:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3028457-3028499:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3026318-3026393:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3025640-3025858:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3023167-3023254:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3022531-3022683:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3021765-3021862:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3020772-3020944:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3019055-3019171:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3017643-3017771:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3014777-3014985:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3012979-3013035:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3012822-3012866:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3011960-3012022:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3008888-3009067:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3007051-3007086:-1:exon

position:3007051:-1
position: 3007051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3007086:-1
position: 3007086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2994050-2994178:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2992397-2992498:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2991882-2991962:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2989867-2989974:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2985615-2988944:-1:exon

EPB41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: EPB41
product: erythrocyte membrane protein band 4.1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032710287.1
SIO_010081: EPB41
subclass of: SO_0000673
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EPB41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: EPB41
product: erythrocyte membrane protein band 4.1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032710289.1
SIO_010081: EPB41
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EPB41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: EPB41
product: erythrocyte membrane protein band 4.1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032710295.1
SIO_010081: EPB41
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EPB41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: EPB41
product: erythrocyte membrane protein band 4.1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032710292.1
SIO_010081: EPB41
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EPB41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: EPB41
product: erythrocyte membrane protein band 4.1, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032710297.1
SIO_010081: EPB41
subclass of: SO_0000673
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EPB41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: EPB41
product: erythrocyte membrane protein band 4.1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032710290.1
SIO_010081: EPB41
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so has part: feature:3022531-3022683:-1:exon
so has part: feature:3021765-3021862:-1:exon
so has part: feature:3020772-3020944:-1:exon
so has part: feature:3019055-3019171:-1:exon
so has part: feature:3014777-3014985:-1:exon
so has part: feature:3011960-3012022:-1:exon
so has part: feature:3008888-3009067:-1:exon
so has part: feature:2994050-2994178:-1:exon
so has part: feature:2992397-2992498:-1:exon
so has part: feature:2991882-2991962:-1:exon
so has part: feature:2989867-2989974:-1:exon
so has part: feature:2985615-2988944:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3071619-3071680:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3036627-3037086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3033789-3034019:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3031363-3031467:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3028457-3028499:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3026318-3026393:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3025640-3025858:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3023167-3023254:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3022531-3022683:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3021765-3021862:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3020772-3020944:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3019055-3019171:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3014777-3014985:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3011960-3012022:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3008888-3009067:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2994050-2994178:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2992397-2992498:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2991882-2991962:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2989867-2989974:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2985615-2988944:-1:exon

EPB41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: EPB41
product: erythrocyte membrane protein band 4.1, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032710296.1
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
location: complement(join(2985615..2988944,2989867..2989974,2991882..2991962,2992397..2992498,2994050..2994178,3008888..3009067,3011960..3012022,3014777..3014985,3020772..3020944,3021765..3021862,3022531..3022683,3023167..3023254,3025640..3025858,3026318..3026393,3028457..3028499,3031363..3031467,3033789..3034019,3036627..3037086,3071619..3071679))
location: region:2985615-3071679:-1
so has part: feature:3071619-3071679:-1:exon
so has part: feature:3036627-3037086:-1:exon
so has part: feature:3033789-3034019:-1:exon
so has part: feature:3031363-3031467:-1:exon
so has part: feature:3028457-3028499:-1:exon
so has part: feature:3026318-3026393:-1:exon
so has part: feature:3025640-3025858:-1:exon
so has part: feature:3023167-3023254:-1:exon
so has part: feature:3022531-3022683:-1:exon
so has part: feature:3021765-3021862:-1:exon
so has part: feature:3020772-3020944:-1:exon
so has part: feature:3014777-3014985:-1:exon
so has part: feature:3011960-3012022:-1:exon
so has part: feature:3008888-3009067:-1:exon
so has part: feature:2994050-2994178:-1:exon
so has part: feature:2992397-2992498:-1:exon
so has part: feature:2991882-2991962:-1:exon
so has part: feature:2989867-2989974:-1:exon
so has part: feature:2985615-2988944:-1:exon

position:3071679:-1
position: 3071679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3071619-3071679:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3036627-3037086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3033789-3034019:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3031363-3031467:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3028457-3028499:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3026318-3026393:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3025640-3025858:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3023167-3023254:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3022531-3022683:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3021765-3021862:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3020772-3020944:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3014777-3014985:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3011960-3012022:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3008888-3009067:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2994050-2994178:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2992397-2992498:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2991882-2991962:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2989867-2989974:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2985615-2988944:-1:exon

EPB41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: EPB41
product: erythrocyte membrane protein band 4.1, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032710300.1
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
location: complement(join(2985615..2988944,2989867..2989974,2991882..2991962,2992397..2992498,2994050..2994178,3007051..3007086,3008888..3009067,3011960..3012022,3012822..3012866,3012979..3013035,3014777..3014985,3020772..3020944,3021765..3021862,3022531..3022683,3023167..3023254,3025640..3025858,3026318..3026393,3028457..3028499,3031363..3031467,3033789..3034019,3036627..3037086))
location: region:2985615-3037086:-1
so has part: feature:3036627-3037086:-1:exon
so has part: feature:3033789-3034019:-1:exon
so has part: feature:3031363-3031467:-1:exon
so has part: feature:3028457-3028499:-1:exon
so has part: feature:3026318-3026393:-1:exon
so has part: feature:3025640-3025858:-1:exon
so has part: feature:3023167-3023254:-1:exon
so has part: feature:3022531-3022683:-1:exon
so has part: feature:3021765-3021862:-1:exon
so has part: feature:3020772-3020944:-1:exon
so has part: feature:3014777-3014985:-1:exon
so has part: feature:3012979-3013035:-1:exon
so has part: feature:3012822-3012866:-1:exon
so has part: feature:3011960-3012022:-1:exon
so has part: feature:3008888-3009067:-1:exon
so has part: feature:3007051-3007086:-1:exon
so has part: feature:2994050-2994178:-1:exon
so has part: feature:2992397-2992498:-1:exon
so has part: feature:2991882-2991962:-1:exon
so has part: feature:2989867-2989974:-1:exon
so has part: feature:2985615-2988944:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3036627-3037086:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3033789-3034019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3031363-3031467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3028457-3028499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3026318-3026393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3025640-3025858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3023167-3023254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3022531-3022683:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3021765-3021862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3020772-3020944:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3014777-3014985:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3012979-3013035:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3012822-3012866:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3011960-3012022:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3008888-3009067:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3007051-3007086:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2994050-2994178:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2992397-2992498:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2991882-2991962:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2989867-2989974:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2985615-2988944:-1:exon

EPB41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: EPB41
product: erythrocyte membrane protein band 4.1, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 21 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032710299.1
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
location: complement(join(2985615..2988944,2989867..2989974,2991882..2991962,2992397..2992498,2994050..2994178,2995322..2995801,3007051..3007086,3008888..3009067,3011960..3012022,3012822..3012866,3012979..3013035,3014777..3014985,3016480..3016602,3017643..3017771,3019055..3019171,3020772..3020944,3021765..3021862,3022531..3022683,3023167..3023254,3025640..3025858,3026318..3026393,3028457..3028499,3031363..3031467,3033789..3034019,3036627..3037086))
location: region:2985615-3037086:-1
so has part: feature:3036627-3037086:-1:exon
so has part: feature:3033789-3034019:-1:exon
so has part: feature:3031363-3031467:-1:exon
so has part: feature:3028457-3028499:-1:exon
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so has part: feature:3025640-3025858:-1:exon
so has part: feature:3023167-3023254:-1:exon
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so has part: feature:3021765-3021862:-1:exon
so has part: feature:3020772-3020944:-1:exon
so has part: feature:3019055-3019171:-1:exon
so has part: feature:3017643-3017771:-1:exon
so has part: feature:3016480-3016602:-1:exon
so has part: feature:3014777-3014985:-1:exon
so has part: feature:3012979-3013035:-1:exon
so has part: feature:3012822-3012866:-1:exon
so has part: feature:3011960-3012022:-1:exon
so has part: feature:3008888-3009067:-1:exon
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so has part: feature:2994050-2994178:-1:exon
so has part: feature:2992397-2992498:-1:exon
so has part: feature:2991882-2991962:-1:exon
so has part: feature:2989867-2989974:-1:exon
so has part: feature:2985615-2988944:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3036627-3037086:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3033789-3034019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3031363-3031467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3028457-3028499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3026318-3026393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3025640-3025858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3023167-3023254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3022531-3022683:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3021765-3021862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3020772-3020944:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3019055-3019171:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3017643-3017771:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3016480-3016602:-1:exon

position:3016480:-1
position: 3016480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3016602:-1
position: 3016602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3014777-3014985:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3012979-3013035:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3012822-3012866:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3011960-3012022:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3008888-3009067:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3007051-3007086:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2995322-2995801:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2994050-2994178:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2992397-2992498:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2991882-2991962:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2989867-2989974:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2985615-2988944:-1:exon

EPB41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: EPB41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein 4.1 isoform X12
translation: MTTEKSPAADADSSDQQQAKEEEGAAEAQKQEASLEEGAQPTSEGQGQKQKASNGDTPTHEEQSKKERRTSEGRGLSRLFSSFLRRPKSQVSEEEKDTDAPKEAGGDQKGAGLGASPDEDILVKAPIAAPEPELKTDPSLDLHSLSSAETQPAQEERRDEQEPEGKDPEDKEEGEAKEECAKPEPKPETPETKADKDLKAAQKTVKRHRNMYCKVVLLDDTIFECAVDKHAKGQELLKKVCDHLNLLEEDYFGLAIWDTPTSRTWLDPAKEIKKQVHGGPWDFTFNVKFYPPDPAQLTEDITRYYLCLQLRQDILTGRLPCSFATLALLGSYTVQSELGDYDPELHGPDYITEFKLAPNQTKELEEKVVELHKTYRSMTPAQADLEFLENAKKLSMYGVDLHQAKDLEGVDITLGVCSSGLLVYKDKLRINRFPWPKVLKISYKRSSFFIKIRPGEQEQYESTIGFKLPSYRAAKKLWKVCVEHHTFFRLTSTEAIPKSRFLALGSKFRYSGRTQAQTRQASALIDRPAPQFERTASKRASRSLDGAVAVITPERSPRPTSAPAIAQSHPAEPAPAKPDVKDVATSKIGKETAKADVRREEFPPEKAKAEPADASKDLDKPQEEIKKHHANISELKKNFMESVPEPRPSEWDKRLSTHSPFRTLNVNGQIPTGADGPPLVKTQTVTISDVSSAIKSEIPTKEVPIVHTETKTITYEAAQTDGGNGDLDPGILLTAQTITSETTSSTTTTQITKTVKGGISETRIEKRIVITGDADVDHDQVLAQAIKAAKEQHPDMSVTKVVVHQETEIAEE
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
location: complement(join(2989876..2989974,2991882..2991962,2992397..2992498,2994050..2994178,3008888..3009067,3014777..3014985,3020772..3020944,3021765..3021862,3022531..3022683,3023167..3023254,3025640..3025858,3026318..3026393,3028457..3028499,3031363..3031467,3033789..3034019,3036627..3037079))
location: region:2989876-3037079:-1
so has part: feature:3036627-3037079:-1:exon
so has part: feature:3033789-3034019:-1:exon
so has part: feature:3031363-3031467:-1:exon
so has part: feature:3028457-3028499:-1:exon
so has part: feature:3026318-3026393:-1:exon
so has part: feature:3025640-3025858:-1:exon
so has part: feature:3023167-3023254:-1:exon
so has part: feature:3022531-3022683:-1:exon
so has part: feature:3021765-3021862:-1:exon
so has part: feature:3020772-3020944:-1:exon
so has part: feature:3014777-3014985:-1:exon
so has part: feature:3008888-3009067:-1:exon
so has part: feature:2994050-2994178:-1:exon
so has part: feature:2992397-2992498:-1:exon
so has part: feature:2991882-2991962:-1:exon
so has part: feature:2989876-2989974:-1:exon

XP_032566188.1
type: Protein
SIO_000068: ncbiprotein

position:2989876:-1
position: 2989876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3037079:-1
position: 3037079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3036627-3037079:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3033789-3034019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3031363-3031467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3028457-3028499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3026318-3026393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3025640-3025858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3023167-3023254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3022531-3022683:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3021765-3021862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3020772-3020944:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3014777-3014985:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3008888-3009067:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2994050-2994178:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2992397-2992498:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2991882-2991962:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2989876-2989974:-1:exon

EPB41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: EPB41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein 4.1 isoform X11
translation: MTTEKSPAADADSSDQQQAKEEEGAAEAQKQEASLEEGAQPTSEGQGQKQKASNGDTPTHEEQSKKERRTSEGRGLSRLFSSFLRRPKSQVSEEEKDTDAPKEAGGDQKGAGLGASPDEDILVKAPIAAPEPELKTDPSLDLHSLSSAETQPAQEERRDEQEPEGKDPEDKEEGEAKEECAKPEPKPETPETKADKDLKAAQKTVKRHRNMYCKVVLLDDTIFECAVDKHAKGQELLKKVCDHLNLLEEDYFGLAIWDTPTSRTWLDPAKEIKKQVHGGPWDFTFNVKFYPPDPAQLTEDITRYYLCLQLRQDILTGRLPCSFATLALLGSYTVQSELGDYDPELHGPDYITEFKLAPNQTKELEEKVVELHKTYRSMTPAQADLEFLENAKKLSMYGVDLHQAKDLEGVDITLGVCSSGLLVYKDKLRINRFPWPKVLKISYKRSSFFIKIRPGEQEQYESTIGFKLPSYRAAKKLWKVCVEHHTFFRLTSTEAIPKSRFLALGSKFRYSGRTQAQTRQASALIDRPAPQFERTASKRASRSLDGAVAVITPERSPRPTSAPAIAQSHPAEPAPAKPDVKDVATSKIGKETAKADVRREEFPPEKAKAEPADASKKRSKRLDGENIYIRHSNLMLEDLDKPQEEIKKHHANISELKKNFMESVPEPRPSEWDKRLSTHSPFRTLNVNGQIPTGADGPPLVKTQTVTISDVSSAIKSEIPTKEVPIVHTETKTITYEAAQTDGGNGDLDPGILLTAQTITSETTSSTTTTQITKTVKGGISETRIEKRIVITGDADVDHDQVLAQAIKAAKEQHPDMSVTKVVVHQETEIAEE
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
location: complement(join(2989876..2989974,2991882..2991962,2992397..2992498,2994050..2994178,3008888..3009067,3011960..3012022,3014777..3014985,3020772..3020944,3021765..3021862,3022531..3022683,3023167..3023254,3025640..3025858,3026318..3026393,3028457..3028499,3031363..3031467,3033789..3034019,3036627..3037079))
location: region:2989876-3037079:-1
so has part: feature:3036627-3037079:-1:exon
so has part: feature:3033789-3034019:-1:exon
so has part: feature:3031363-3031467:-1:exon
so has part: feature:3028457-3028499:-1:exon
so has part: feature:3026318-3026393:-1:exon
so has part: feature:3025640-3025858:-1:exon
so has part: feature:3023167-3023254:-1:exon
so has part: feature:3022531-3022683:-1:exon
so has part: feature:3021765-3021862:-1:exon
so has part: feature:3020772-3020944:-1:exon
so has part: feature:3014777-3014985:-1:exon
so has part: feature:3011960-3012022:-1:exon
so has part: feature:3008888-3009067:-1:exon
so has part: feature:2994050-2994178:-1:exon
so has part: feature:2992397-2992498:-1:exon
so has part: feature:2991882-2991962:-1:exon
so has part: feature:2989876-2989974:-1:exon

XP_032566187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3036627-3037079:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3033789-3034019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3031363-3031467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3028457-3028499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3026318-3026393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3025640-3025858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3023167-3023254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3022531-3022683:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3021765-3021862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3020772-3020944:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3014777-3014985:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3011960-3012022:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3008888-3009067:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2994050-2994178:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2992397-2992498:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2991882-2991962:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2989876-2989974:-1:exon

EPB41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: EPB41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein 4.1 isoform X10
translation: MTTEKSPAADADSSDQQQAKEEEGAAEAQKQEASLEEGAQPTSEGQGQKQKASNGDTPTHEEQSKKERRTSEGRGLSRLFSSFLRRPKSQVSEEEKDTDAPKEAGGDQKGAGLGASPDEDILVKAPIAAPEPELKTDPSLDLHSLSSAETQPAQEERRDEQEPEGKDPEDKEEGEAKEECAKPEPKPETPETKADKDLKAAQKTVKRHRNMYCKVVLLDDTIFECAVDKHAKGQELLKKVCDHLNLLEEDYFGLAIWDTPTSRTWLDPAKEIKKQVHGGPWDFTFNVKFYPPDPAQLTEDITRYYLCLQLRQDILTGRLPCSFATLALLGSYTVQSELGDYDPELHGPDYITEFKLAPNQTKELEEKVVELHKTYRSMTPAQADLEFLENAKKLSMYGVDLHQAKDLEGVDITLGVCSSGLLVYKDKLRINRFPWPKVLKISYKRSSFFIKIRPGEQEQYESTIGFKLPSYRAAKKLWKVCVEHHTFFRLTSTEAIPKSRFLALGSKFRYSGRTQAQTRQASALIDRPAPQFERTASKRASRSLDGAVAVITPERSPRPTSAPAIAQSHPAEPAPAKPDVKDVATSKIGKETAKADVRREEFPPEKAKAEPADASKVRKTHIEVTVPTTNGAQPQKRSKRLDGENIYIRHSNLMLEDLDKPQEEIKKHHANISELKKNFMESVPEPRPSEWDKRLSTHSPFRTLNVNGQIPTGADGPPLVKTQTVTISDVSSAIKSEIPTKEVPIVHTETKTITYEAAQTDGGNGDLDPGILLTAQTITSETTSSTTTTQITKTVKGGISETRIEKRIVITGDADVDHDQVLAQAIKAAKEQHPDMSVTKVVVHQETEIAEE
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
location: complement(join(2989876..2989974,2991882..2991962,2992397..2992498,2994050..2994178,3008888..3009067,3011960..3012022,3012979..3013035,3014777..3014985,3020772..3020944,3021765..3021862,3022531..3022683,3023167..3023254,3025640..3025858,3026318..3026393,3028457..3028499,3031363..3031467,3033789..3034019,3036627..3037079))
location: region:2989876-3037079:-1
so has part: feature:3036627-3037079:-1:exon
so has part: feature:3033789-3034019:-1:exon
so has part: feature:3031363-3031467:-1:exon
so has part: feature:3028457-3028499:-1:exon
so has part: feature:3026318-3026393:-1:exon
so has part: feature:3025640-3025858:-1:exon
so has part: feature:3023167-3023254:-1:exon
so has part: feature:3022531-3022683:-1:exon
so has part: feature:3021765-3021862:-1:exon
so has part: feature:3020772-3020944:-1:exon
so has part: feature:3014777-3014985:-1:exon
so has part: feature:3012979-3013035:-1:exon
so has part: feature:3011960-3012022:-1:exon
so has part: feature:3008888-3009067:-1:exon
so has part: feature:2994050-2994178:-1:exon
so has part: feature:2992397-2992498:-1:exon
so has part: feature:2991882-2991962:-1:exon
so has part: feature:2989876-2989974:-1:exon

XP_032566186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3036627-3037079:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3033789-3034019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3031363-3031467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3028457-3028499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3026318-3026393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3025640-3025858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3023167-3023254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3022531-3022683:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3021765-3021862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3020772-3020944:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3014777-3014985:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3012979-3013035:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3011960-3012022:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3008888-3009067:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2994050-2994178:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2992397-2992498:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2991882-2991962:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2989876-2989974:-1:exon

EPB41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: EPB41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein 4.1 isoform X7
translation: MTTEKSPAADADSSDQQQAKEEEGAAEAQKQEASLEEGAQPTSEGQGQKQKASNGDTPTHEEQSKKERRTSEGRGLSRLFSSFLRRPKSQVSEEEKDTDAPKEAGGDQKGAGLGASPDEDILVKAPIAAPEPELKTDPSLDLHSLSSAETQPAQEERRDEQEPEGKDPEDKEEGEAKEECAKPEPKPETPETKADKDLKAAQKTVKRHRNMYCKVVLLDDTIFECAVDKHAKGQELLKKVCDHLNLLEEDYFGLAIWDTPTSRTWLDPAKEIKKQVHGGPWDFTFNVKFYPPDPAQLTEDITRYYLCLQLRQDILTGRLPCSFATLALLGSYTVQSELGDYDPELHGPDYITEFKLAPNQTKELEEKVVELHKTYRSMTPAQADLEFLENAKKLSMYGVDLHQAKDLEGVDITLGVCSSGLLVYKDKLRINRFPWPKVLKISYKRSSFFIKIRPGEQEQYESTIGFKLPSYRAAKKLWKVCVEHHTFFRLTSTEAIPKSRFLALGSKFRYSGRTQAQTRQASALIDRPAPQFERTASKRASRSLDGAVAVITPERSPRPTSAPAIAQSHPAEPAPAKPDVKDVATSKIGKETAKADVRREEFPPEKAKAEPADASKVRKTHIEVTVPTTNGAQPQQPAEKEEELIRMRKKRSKRLDGENIYIRHSNLMLEDLDKPQEEIKKHHANISELKKNFMESVPEPRPSEWDKRLSTHSPFRTLNVNGQIPTGADGPPLVKTQTVTISDVSSAIKSEIPTKEVPIVHTETKTITYEAAQTDGGNGDLDPGILLTAQTITSETTSSTTTTQITKTVKGGISETRIEKRIVITGDADVDHDQVLAQAIKAAKEQHPDMSVTKVVVHQETEIAEE
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
location: complement(join(2989876..2989974,2991882..2991962,2992397..2992498,2994050..2994178,3008888..3009067,3011960..3012022,3012822..3012863,3012979..3013035,3014777..3014985,3020772..3020944,3021765..3021862,3022531..3022683,3023167..3023254,3025640..3025858,3026318..3026393,3028457..3028499,3031363..3031467,3033789..3034019,3036627..3037079))
location: region:2989876-3037079:-1
so has part: feature:3036627-3037079:-1:exon
so has part: feature:3033789-3034019:-1:exon
so has part: feature:3031363-3031467:-1:exon
so has part: feature:3028457-3028499:-1:exon
so has part: feature:3026318-3026393:-1:exon
so has part: feature:3025640-3025858:-1:exon
so has part: feature:3023167-3023254:-1:exon
so has part: feature:3022531-3022683:-1:exon
so has part: feature:3021765-3021862:-1:exon
so has part: feature:3020772-3020944:-1:exon
so has part: feature:3014777-3014985:-1:exon
so has part: feature:3012979-3013035:-1:exon
so has part: feature:3012822-3012863:-1:exon
so has part: feature:3011960-3012022:-1:exon
so has part: feature:3008888-3009067:-1:exon
so has part: feature:2994050-2994178:-1:exon
so has part: feature:2992397-2992498:-1:exon
so has part: feature:2991882-2991962:-1:exon
so has part: feature:2989876-2989974:-1:exon

XP_032566183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3036627-3037079:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3033789-3034019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3031363-3031467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3028457-3028499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3026318-3026393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3025640-3025858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3023167-3023254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3022531-3022683:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3021765-3021862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3020772-3020944:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3014777-3014985:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3012979-3013035:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3012822-3012863:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3011960-3012022:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3008888-3009067:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2994050-2994178:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2992397-2992498:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2991882-2991962:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2989876-2989974:-1:exon

EPB41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: EPB41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein 4.1 isoform X15
translation: MTTEKSPAADADSSDQQQAKEEEGAAEAQKQEASLEEGAQPTSEGQGQKQKASNGDTPTHEEQSKKERRTSEGRGLSRLFSSFLRRPKSQVSEEEKDTDAPKEAGGDQKGAGLGASPDEDILVKAPIAAPEPELKTDPSLDLHSLSSAETQPAQEERRDEQEPEGKDPEDKEEGEAKEECAKPEPKPETPETKADKDLKAAQKTVKRHRNMYCKVVLLDDTIFECAVDKHAKGQELLKKVCDHLNLLEEDYFGLAIWDTPTSRTWLDPAKEIKKQVHGGPWDFTFNVKFYPPDPAQLTEDITRYYLCLQLRQDILTGRLPCSFATLALLGSYTVQSELGDYDPELHGPDYITEFKLAPNQTKELEEKVVELHKTYRSMTPAQADLEFLENAKKLSMYGVDLHQAKDLEGVDITLGVCSSGLLVYKDKLRINRFPWPKVLKISYKRSSFFIKIRPGEQEQYESTIGFKLPSYRAAKKLWKVCVEHHTFFRLTSTEAIPKSRFLALGSKFRYSGRTQAQTRQASALIDRPAPQFERTASKRASRSLDGAVAVITPERSPRPTSAPAIAQSHPAEPAPAKPDVKDVATSKIGKETAKADVRREEFPPEKAKAEPADASKVRKTHIEVTVPTTNGAQPQQQPAEKEEELIRMRKKRSKRLDGENIYIRHSNLMLEDLDKPQEEIKKHHANISELKKNFMESVPEPRPSEWDKRLSTHSPFRTLNVNGQIPTGADGVKKVTVLSSERQPPLVKTQTVTISDVSSAIKSEIPTKEVPIVHTETKTITYEAAQTDGGNGDLDPGILLTAQTITSETTSSTTTTQITKTVKGGISETRIEKRIVITGDADVDHDQVLAQAIKAAKEQHPDMSVTKVVVHQETEIAEE
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
location: complement(join(2989876..2989974,2991882..2991962,2992397..2992498,2994050..2994178,3007051..3007086,3008888..3009067,3011960..3012022,3012822..3012866,3012979..3013035,3014777..3014985,3020772..3020944,3021765..3021862,3022531..3022683,3023167..3023254,3025640..3025858,3026318..3026393,3028457..3028499,3031363..3031467,3033789..3034019,3036627..3037079))
location: region:2989876-3037079:-1
so has part: feature:3036627-3037079:-1:exon
so has part: feature:3033789-3034019:-1:exon
so has part: feature:3031363-3031467:-1:exon
so has part: feature:3028457-3028499:-1:exon
so has part: feature:3026318-3026393:-1:exon
so has part: feature:3025640-3025858:-1:exon
so has part: feature:3023167-3023254:-1:exon
so has part: feature:3022531-3022683:-1:exon
so has part: feature:3021765-3021862:-1:exon
so has part: feature:3020772-3020944:-1:exon
so has part: feature:3014777-3014985:-1:exon
so has part: feature:3012979-3013035:-1:exon
so has part: feature:3012822-3012866:-1:exon
so has part: feature:3011960-3012022:-1:exon
so has part: feature:3008888-3009067:-1:exon
so has part: feature:3007051-3007086:-1:exon
so has part: feature:2994050-2994178:-1:exon
so has part: feature:2992397-2992498:-1:exon
so has part: feature:2991882-2991962:-1:exon
so has part: feature:2989876-2989974:-1:exon

XP_032566191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3036627-3037079:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3033789-3034019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3031363-3031467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3028457-3028499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3026318-3026393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3025640-3025858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3023167-3023254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3022531-3022683:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3021765-3021862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3020772-3020944:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3014777-3014985:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3012979-3013035:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3012822-3012866:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3011960-3012022:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3008888-3009067:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3007051-3007086:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2994050-2994178:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2992397-2992498:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2991882-2991962:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2989876-2989974:-1:exon

EPB41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: EPB41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein 4.1 isoform X5
translation: MTTEKSPAADADSSDQQQAKEEEGAAEAQKQEASLEEGAQPTSEGQGQKQKASNGDTPTHEEQSKKERRTSEGRGLSRLFSSFLRRPKSQVSEEEKDTDAPKEAGGDQKGAGLGASPDEDILVKAPIAAPEPELKTDPSLDLHSLSSAETQPAQEERRDEQEPEGKDPEDKEEGEAKEECAKPEPKPETPETKADKDLKAAQKTVKRHRNMYCKVVLLDDTIFECAVDKHAKGQELLKKVCDHLNLLEEDYFGLAIWDTPTSRTWLDPAKEIKKQVHGGPWDFTFNVKFYPPDPAQLTEDITRYYLCLQLRQDILTGRLPCSFATLALLGSYTVQSELGDYDPELHGPDYITEFKLAPNQTKELEEKVVELHKTYRSMTPAQADLEFLENAKKLSMYGVDLHQAKDLEGVDITLGVCSSGLLVYKDKLRINRFPWPKVLKISYKRSSFFIKIRPGEQEQYESTIGFKLPSYRAAKKLWKVCVEHHTFFRLTSTEAIPKSRFLALGSKFRYSGRTQAQTRQASALIDRPAPQFERTASKRASRSLDGAKRATQKVEFRTVEEEKQKEVVVVEVPEPKPADQIREKPAVAVITPERSPRPTSAPAIAQSHPAEPAPAKPDVKDVATSKIGKETAKADVRREEFPPEKAKAEPADASKKRSKRLDGENIYIRHSNLMLEDLDKPQEEIKKHHANISELKKNFMESVPEPRPSEWDKRLSTHSPFRTLNVNGQIPTGADGPPLVKTQTVTISDVSSAIKSEIPTKEVPIVHTETKTITYEAAQTDGGNGDLDPGILLTAQTITSETTSSTTTTQITKTVKGGISETRIEKRIVITGDADVDHDQVLAQAIKAAKEQHPDMSVTKVVVHQETEIAEE
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
location: complement(join(2989876..2989974,2991882..2991962,2992397..2992498,2994050..2994178,3008888..3009067,3011960..3012022,3014777..3014985,3019055..3019171,3020772..3020944,3021765..3021862,3022531..3022683,3023167..3023254,3025640..3025858,3026318..3026393,3028457..3028499,3031363..3031467,3033789..3034019,3036627..3037079))
location: region:2989876-3037079:-1
so has part: feature:3036627-3037079:-1:exon
so has part: feature:3033789-3034019:-1:exon
so has part: feature:3031363-3031467:-1:exon
so has part: feature:3028457-3028499:-1:exon
so has part: feature:3026318-3026393:-1:exon
so has part: feature:3025640-3025858:-1:exon
so has part: feature:3023167-3023254:-1:exon
so has part: feature:3022531-3022683:-1:exon
so has part: feature:3021765-3021862:-1:exon
so has part: feature:3020772-3020944:-1:exon
so has part: feature:3019055-3019171:-1:exon
so has part: feature:3014777-3014985:-1:exon
so has part: feature:3011960-3012022:-1:exon
so has part: feature:3008888-3009067:-1:exon
so has part: feature:2994050-2994178:-1:exon
so has part: feature:2992397-2992498:-1:exon
so has part: feature:2991882-2991962:-1:exon
so has part: feature:2989876-2989974:-1:exon

XP_032566181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3036627-3037079:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3033789-3034019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3031363-3031467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3028457-3028499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3026318-3026393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3025640-3025858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3023167-3023254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3022531-3022683:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3021765-3021862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3020772-3020944:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3019055-3019171:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3014777-3014985:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3011960-3012022:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3008888-3009067:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2994050-2994178:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2992397-2992498:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2991882-2991962:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2989876-2989974:-1:exon

EPB41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: EPB41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein 4.1 isoform X4
translation: MTTEKSPAADADSSDQQQAKEEEGAAEAQKQEASLEEGAQPTSEGQGQKQKASNGDTPTHEEQSKKERRTSEGRGLSRLFSSFLRRPKSQVSEEEKDTDAPKEAGGDQKGAGLGASPDEDILVKAPIAAPEPELKTDPSLDLHSLSSAETQPAQEERRDEQEPEGKDPEDKEEGEAKEECAKPEPKPETPETKADKDLKAAQKTVKRHRNMYCKVVLLDDTIFECAVDKHAKGQELLKKVCDHLNLLEEDYFGLAIWDTPTSRTWLDPAKEIKKQVHGGPWDFTFNVKFYPPDPAQLTEDITRYYLCLQLRQDILTGRLPCSFATLALLGSYTVQSELGDYDPELHGPDYITEFKLAPNQTKELEEKVVELHKTYRSMTPAQADLEFLENAKKLSMYGVDLHQAKDLEGVDITLGVCSSGLLVYKDKLRINRFPWPKVLKISYKRSSFFIKIRPGEQEQYESTIGFKLPSYRAAKKLWKVCVEHHTFFRLTSTEAIPKSRFLALGSKFRYSGRTQAQTRQASALIDRPAPQFERTASKRASRSLDGAKRATQKVEFRTVEEEKQKEVVVVEVPEPKPADQIREKPAKHTLETFEMKPIAEEEEEEEKVEVVKVPVAKPKFPEPVPPRSAVAVITPERSPRPTSAPAIAQSHPAEPAPAKPDVKDVATSKIGKETAKADVRREEFPPEKAKAEPADASKVRKTHIEVTVPTTNGAQPQQQPAEKEEELIRMRKKRSKRLDGENIYIRHSNLMLEDLDKPQEEIKKHHANISELKKNFMESVPEPRPSEWDKRLSTHSPFRTLNVNGQIPTGADGPPLVKTQTVTISDVSSAIKSEIPTKEVPIVHTETKTITYEAAQTDGGNGDLDPGILLTAQTITSETTSSTTTTQITKTVKGGISETRIEKRIVITGDADVDHDQVLAQAIKAAKEQHPDMSVTKVVVHQETEIAEE
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
location: complement(join(2989876..2989974,2991882..2991962,2992397..2992498,2994050..2994178,3008888..3009067,3011960..3012022,3012822..3012866,3012979..3013035,3014777..3014985,3017643..3017771,3019055..3019171,3020772..3020944,3021765..3021862,3022531..3022683,3023167..3023254,3025640..3025858,3026318..3026393,3028457..3028499,3031363..3031467,3033789..3034019,3036627..3037079))
location: region:2989876-3037079:-1
so has part: feature:3036627-3037079:-1:exon
so has part: feature:3033789-3034019:-1:exon
so has part: feature:3031363-3031467:-1:exon
so has part: feature:3028457-3028499:-1:exon
so has part: feature:3026318-3026393:-1:exon
so has part: feature:3025640-3025858:-1:exon
so has part: feature:3023167-3023254:-1:exon
so has part: feature:3022531-3022683:-1:exon
so has part: feature:3021765-3021862:-1:exon
so has part: feature:3020772-3020944:-1:exon
so has part: feature:3019055-3019171:-1:exon
so has part: feature:3017643-3017771:-1:exon
so has part: feature:3014777-3014985:-1:exon
so has part: feature:3012979-3013035:-1:exon
so has part: feature:3012822-3012866:-1:exon
so has part: feature:3011960-3012022:-1:exon
so has part: feature:3008888-3009067:-1:exon
so has part: feature:2994050-2994178:-1:exon
so has part: feature:2992397-2992498:-1:exon
so has part: feature:2991882-2991962:-1:exon
so has part: feature:2989876-2989974:-1:exon

XP_032566180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3036627-3037079:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3033789-3034019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3031363-3031467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3028457-3028499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3026318-3026393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3025640-3025858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3023167-3023254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3022531-3022683:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3021765-3021862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3020772-3020944:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3019055-3019171:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3017643-3017771:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3014777-3014985:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3012979-3013035:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3012822-3012866:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3011960-3012022:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3008888-3009067:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2994050-2994178:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2992397-2992498:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2991882-2991962:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2989876-2989974:-1:exon

EPB41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: EPB41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein 4.1 isoform X1
translation: MTTEKSPAADADSSDQQQAKEEEGAAEAQKQEASLEEGAQPTSEGQGQKQKASNGDTPTHEEQSKKERRTSEGRGLSRLFSSFLRRPKSQVSEEEKDTDAPKEAGGDQKGAGLGASPDEDILVKAPIAAPEPELKTDPSLDLHSLSSAETQPAQEERRDEQEPEGKDPEDKEEGEAKEECAKPEPKPETPETKADKDLKAAQKTVKRHRNMYCKVVLLDDTIFECAVDKHAKGQELLKKVCDHLNLLEEDYFGLAIWDTPTSRTWLDPAKEIKKQVHGGPWDFTFNVKFYPPDPAQLTEDITRYYLCLQLRQDILTGRLPCSFATLALLGSYTVQSELGDYDPELHGPDYITEFKLAPNQTKELEEKVVELHKTYRSMTPAQADLEFLENAKKLSMYGVDLHQAKDLEGVDITLGVCSSGLLVYKDKLRINRFPWPKVLKISYKRSSFFIKIRPGEQEQYESTIGFKLPSYRAAKKLWKVCVEHHTFFRLTSTEAIPKSRFLALGSKFRYSGRTQAQTRQASALIDRPAPQFERTASKRASRSLDGAKRATQKVEFRTVEEEKQKEVVVVEVPEPKPADQIREKPAKHTLETFEMKPIAEEEEEEEKVEVVKVPVAKPKFPEPVPPRSAVAVITPERSPRPTSAPAIAQSHPAEPAPAKPDVKDVATSKIGKETAKADVRREEFPPEKAKAEPADASKVRKTHIEVTVPTTNGAQPQQQPAEKEEELIRMRKKRSKRLDGENIYIRHSNLMLEDLDKPQEEIKKHHANISELKKNFMESVPEPRPSEWDKRLSTHSPFRTLNVNGQIPTGADGKMSDFSSQEDVAAVPERSSVNSGFAWEGSKQSVAFSETPVPPASEPSPSQHFGASSLSSEEEEVEEKEEEEAAPSLPTSEEDLTCGKGVCVDVEKDSELSELEPPTSPAPPQQPWGEEEEEEEEEVAEDGEDSFAFRKPHGECHNSDAPSGLPVVIRCFQPPLVKTQTVTISDVSSAIKSEIPTKEVPIVHTETKTITYEAAQTDGGNGDLDPGILLTAQTITSETTSSTTTTQITKTVKGGISETRIEKRIVITGDADVDHDQVLAQAIKAAKEQHPDMSVTKVVVHQETEIAEE
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
location: complement(join(2989876..2989974,2991882..2991962,2992397..2992498,2994050..2994178,2995322..2995801,3008888..3009067,3011960..3012022,3012822..3012866,3012979..3013035,3014777..3014985,3017643..3017771,3019055..3019171,3020772..3020944,3021765..3021862,3022531..3022683,3023167..3023254,3025640..3025858,3026318..3026393,3028457..3028499,3031363..3031467,3033789..3034019,3036627..3037079))
location: region:2989876-3037079:-1
so has part: feature:3036627-3037079:-1:exon
so has part: feature:3033789-3034019:-1:exon
so has part: feature:3031363-3031467:-1:exon
so has part: feature:3028457-3028499:-1:exon
so has part: feature:3026318-3026393:-1:exon
so has part: feature:3025640-3025858:-1:exon
so has part: feature:3023167-3023254:-1:exon
so has part: feature:3022531-3022683:-1:exon
so has part: feature:3021765-3021862:-1:exon
so has part: feature:3020772-3020944:-1:exon
so has part: feature:3019055-3019171:-1:exon
so has part: feature:3017643-3017771:-1:exon
so has part: feature:3014777-3014985:-1:exon
so has part: feature:3012979-3013035:-1:exon
so has part: feature:3012822-3012866:-1:exon
so has part: feature:3011960-3012022:-1:exon
so has part: feature:3008888-3009067:-1:exon
so has part: feature:2995322-2995801:-1:exon
so has part: feature:2994050-2994178:-1:exon
so has part: feature:2992397-2992498:-1:exon
so has part: feature:2991882-2991962:-1:exon
so has part: feature:2989876-2989974:-1:exon

XP_032566177.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3036627-3037079:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3033789-3034019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3031363-3031467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3028457-3028499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3026318-3026393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3025640-3025858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3023167-3023254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3022531-3022683:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3021765-3021862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3020772-3020944:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3019055-3019171:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3017643-3017771:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3014777-3014985:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3012979-3013035:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3012822-3012866:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3011960-3012022:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3008888-3009067:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2995322-2995801:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2994050-2994178:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2992397-2992498:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2991882-2991962:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2989876-2989974:-1:exon

EPB41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: EPB41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein 4.1 isoform X3
translation: MTTEKSPAADADSSDQQQAKEEEGAAEAQKQEASLEEGAQPTSEGQGQKQKASNGDTPTHEEQSKKERRTSEGRGLSRLFSSFLRRPKSQVSEEEKDTDAPKEAGGDQKGAGLGASPDEDILVKAPIAAPEPELKTDPSLDLHSLSSAETQPAQEERRDEQEPEGKDPEDKEEGEAKEECAKPEPKPETPETKADKDLKAAQKTVKRHRNMYCKVVLLDDTIFECAVDKHAKGQELLKKVCDHLNLLEEDYFGLAIWDTPTSRTWLDPAKEIKKQVHGGPWDFTFNVKFYPPDPAQLTEDITRYYLCLQLRQDILTGRLPCSFATLALLGSYTVQSELGDYDPELHGPDYITEFKLAPNQTKELEEKVVELHKTYRSMTPAQADLEFLENAKKLSMYGVDLHQAKDLEGVDITLGVCSSGLLVYKDKLRINRFPWPKVLKISYKRSSFFIKIRPGEQEQYESTIGFKLPSYRAAKKLWKVCVEHHTFFRLTSTEAIPKSRFLALGSKFRYSGRTQAQTRQASALIDRPAPQFERTASKRASRSLDGAKRATQKVEFRTVEEEKQKEVVVVEVPEPKPADQIREKPAKHTLETFEMKPIAEEEEEEEKVEVVKVPVAKPKFPEPVPPRSAVAVITPERSPRPTSAPAIAQSHPAEPAPAKPDVKDVATSKIGKETAKADVRREEFPPEKAKAEPADASKVRKTHIEVTVPTTNGAQPQQQPAEKEEELIRMRKKRSKRLDGENIYIRHSNLMLEDLDKPQEEIKKHHANISELKKNFMESVPEPRPSEWDKRLSTHSPFRTLNVNGQIPTGADGVKKVTVLSSERQPPLVKTQTVTISDVSSAIKSEIPTKEVPIVHTETKTITYEAAQTDGGNGDLDPGILLTAQTITSETTSSTTTTQITKTVKGGISETRIEKRIVITGDADVDHDQVLAQAIKAAKEQHPDMSVTKVVVHQETEIAEE
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
location: complement(join(2989876..2989974,2991882..2991962,2992397..2992498,2994050..2994178,3007051..3007086,3008888..3009067,3011960..3012022,3012822..3012866,3012979..3013035,3014777..3014985,3017643..3017771,3019055..3019171,3020772..3020944,3021765..3021862,3022531..3022683,3023167..3023254,3025640..3025858,3026318..3026393,3028457..3028499,3031363..3031467,3033789..3034019,3036627..3037079))
location: region:2989876-3037079:-1
so has part: feature:3036627-3037079:-1:exon
so has part: feature:3033789-3034019:-1:exon
so has part: feature:3031363-3031467:-1:exon
so has part: feature:3028457-3028499:-1:exon
so has part: feature:3026318-3026393:-1:exon
so has part: feature:3025640-3025858:-1:exon
so has part: feature:3023167-3023254:-1:exon
so has part: feature:3022531-3022683:-1:exon
so has part: feature:3021765-3021862:-1:exon
so has part: feature:3020772-3020944:-1:exon
so has part: feature:3019055-3019171:-1:exon
so has part: feature:3017643-3017771:-1:exon
so has part: feature:3014777-3014985:-1:exon
so has part: feature:3012979-3013035:-1:exon
so has part: feature:3012822-3012866:-1:exon
so has part: feature:3011960-3012022:-1:exon
so has part: feature:3008888-3009067:-1:exon
so has part: feature:3007051-3007086:-1:exon
so has part: feature:2994050-2994178:-1:exon
so has part: feature:2992397-2992498:-1:exon
so has part: feature:2991882-2991962:-1:exon
so has part: feature:2989876-2989974:-1:exon

XP_032566179.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3036627-3037079:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3033789-3034019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3031363-3031467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3028457-3028499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3026318-3026393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3025640-3025858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3023167-3023254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3022531-3022683:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3021765-3021862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3020772-3020944:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3019055-3019171:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3017643-3017771:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3014777-3014985:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3012979-3013035:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3012822-3012866:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3011960-3012022:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3008888-3009067:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3007051-3007086:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2994050-2994178:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2992397-2992498:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2991882-2991962:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2989876-2989974:-1:exon

EPB41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: EPB41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein 4.1 isoform X2
translation: MTTEKSPAADADSSDQQQAKEEEGAAEAQKQEASLEEGAQPTSEGQGQKQKASNGDTPTHEEQSKKERRTSEGRGLSRLFSSFLRRPKSQVSEEEKDTDAPKEAGGDQKGAGLGASPDEDILVKAPIAAPEPELKTDPSLDLHSLSSAETQPAQEERRDEQEPEGKDPEDKEEGEAKEECAKPEPKPETPETKADKDLKAAQKTVKRHRNMYCKVVLLDDTIFECAVDKHAKGQELLKKVCDHLNLLEEDYFGLAIWDTPTSRTWLDPAKEIKKQVHGGPWDFTFNVKFYPPDPAQLTEDITRYYLCLQLRQDILTGRLPCSFATLALLGSYTVQSELGDYDPELHGPDYITEFKLAPNQTKELEEKVVELHKTYRSMTPAQADLEFLENAKKLSMYGVDLHQAKDLEGVDITLGVCSSGLLVYKDKLRINRFPWPKVLKISYKRSSFFIKIRPGEQEQYESTIGFKLPSYRAAKKLWKVCVEHHTFFRLTSTEAIPKSRFLALGSKFRYSGRTQAQTRQASALIDRPAPQFERTASKRASRSLDGAKRATQKVEFRTVEEEKQKEVVVVEVPEPKPADQIREKPAKHTLETFEMKPIAEEEEEEEKVEVVKVPVAKPKFPEPVPPRSAVAVITPERSPRPTSAPAIAQSHPAEPAPAKPDVKDVATSKIGKETAKADVRREEFPPEKAKAEPADASKVRKTHIEVTVPTTNGAQPQQQPAEKEEELIRMRKKRSKRLDGENIYIRHSNLMLEDLDKPQEEIKKHHANISELKKNFMESVPEPRPSEWDKRLSTHSPFRTLNVNGQIPTGADGVKKVTVLSSERQVGGLEPPLVKTQTVTISDVSSAIKSEIPTKEVPIVHTETKTITYEAAQTDGGNGDLDPGILLTAQTITSETTSSTTTTQITKTVKGGISETRIEKRIVITGDADVDHDQVLAQAIKAAKEQHPDMSVTKVVVHQETEIAEE
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
location: complement(join(2989876..2989974,2991882..2991962,2992397..2992498,2994050..2994178,3007036..3007086,3008888..3009067,3011960..3012022,3012822..3012866,3012979..3013035,3014777..3014985,3017643..3017771,3019055..3019171,3020772..3020944,3021765..3021862,3022531..3022683,3023167..3023254,3025640..3025858,3026318..3026393,3028457..3028499,3031363..3031467,3033789..3034019,3036627..3037079))
location: region:2989876-3037079:-1
so has part: feature:3036627-3037079:-1:exon
so has part: feature:3033789-3034019:-1:exon
so has part: feature:3031363-3031467:-1:exon
so has part: feature:3028457-3028499:-1:exon
so has part: feature:3026318-3026393:-1:exon
so has part: feature:3025640-3025858:-1:exon
so has part: feature:3023167-3023254:-1:exon
so has part: feature:3022531-3022683:-1:exon
so has part: feature:3021765-3021862:-1:exon
so has part: feature:3020772-3020944:-1:exon
so has part: feature:3019055-3019171:-1:exon
so has part: feature:3017643-3017771:-1:exon
so has part: feature:3014777-3014985:-1:exon
so has part: feature:3012979-3013035:-1:exon
so has part: feature:3012822-3012866:-1:exon
so has part: feature:3011960-3012022:-1:exon
so has part: feature:3008888-3009067:-1:exon
so has part: feature:3007036-3007086:-1:exon
so has part: feature:2994050-2994178:-1:exon
so has part: feature:2992397-2992498:-1:exon
so has part: feature:2991882-2991962:-1:exon
so has part: feature:2989876-2989974:-1:exon

XP_032566178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3036627-3037079:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3033789-3034019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3031363-3031467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3028457-3028499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3026318-3026393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3025640-3025858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3023167-3023254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3022531-3022683:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3021765-3021862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3020772-3020944:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3019055-3019171:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3017643-3017771:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3014777-3014985:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3012979-3013035:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3012822-3012866:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3011960-3012022:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3008888-3009067:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3007036-3007086:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2994050-2994178:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2992397-2992498:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2991882-2991962:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2989876-2989974:-1:exon

EPB41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: EPB41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein 4.1 isoform X14
translation: MTTEKSPAADADSSDQQQAKEEEGAAEAQKQEASLEEGAQPTSEGQGQKQKASNGDTPTHEEQSKKERRTSEGRGLSRLFSSFLRRPKSQVSEEEKDTDAPKEAGGDQKGAGLGASPDEDILVKAPIAAPEPELKTDPSLDLHSLSSAETQPAQEERRDEQEPEGKDPEDKEEGEAKEECAKPEPKPETPETKADKDLKAAQKTVKRHRNMYCKVVLLDDTIFECAVDKHAKGQELLKKVCDHLNLLEEDYFGLAIWDTPTSRTWLDPAKEIKKQVHGGPWDFTFNVKFYPPDPAQLTEDITRYYLCLQLRQDILTGRLPCSFATLALLGSYTVQSELGDYDPELHGPDYITEFKLAPNQTKELEEKVVELHKTYRSMTPAQADLEFLENAKKLSMYGVDLHQAKDLEGVDITLGVCSSGLLVYKDKLRINRFPWPKVLKISYKRSSFFIKIRPGEQEQYESTIGFKLPSYRAAKKLWKVCVEHHTFFRLTSTEAIPKSRFLALGSKFRYSGRTQAQTRQASALIDRPAPQFERTASKRASRSLDGAKRATQKVEFRTVEEEKQKEVVVVEVPEPKPADQIREKPAKHTLETFEMKPIAEEEEEEEKVEVVKVPVAKPKFPEPVPPRSAKRDLGSIEISPIEEEEEEEEEEEEEKMMMVRELEPVPKEPAVAVITPERSPRPTSAPAIAQSHPAEPAPAKPDVKDVATSKIGKETAKADVRREEFPPEKAKAEPADASKVRKTHIEVTVPTTNGAQPQQQPAEKEEELIRMRKKRSKRLDGENIYIRHSNLMLEDLDKPQEEIKKHHANISELKKNFMESVPEPRPSEWDKRLSTHSPFRTLNVNGQIPTGADGVKKVTVLSSERQKMSDFSSQEDVAAVPERSSVNSGFAWEGSKQSVAFSETPVPPASEPSPSQHFGASSLSSEEEEVEEKEEEEAAPSLPTSEEDLTCGKGVCVDVEKDSELSELEPPTSPAPPQQPWGEEEEEEEEEVAEDGEDSFAFRKPHGECHNSDAPSGLPVVIRCFQPPLVKTQTVTISDVSSAIKSEIPTKEVPIVHTETKTITYEAAQTDGGNGDLDPGILLTAQTITSETTSSTTTTQITKTVKGGISETRIEKRIVITGDADVDHDQVLAQAIKAAKEQHPDMSVTKVVVHQETEIAEE
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
location: complement(join(2989876..2989974,2991882..2991962,2992397..2992498,2994050..2994178,2995322..2995801,3007051..3007086,3008888..3009067,3011960..3012022,3012822..3012866,3012979..3013035,3014777..3014985,3016480..3016602,3017643..3017771,3019055..3019171,3020772..3020944,3021765..3021862,3022531..3022683,3023167..3023254,3025640..3025858,3026318..3026393,3028457..3028499,3031363..3031467,3033789..3034019,3036627..3037079))
location: region:2989876-3037079:-1
so has part: feature:3036627-3037079:-1:exon
so has part: feature:3033789-3034019:-1:exon
so has part: feature:3031363-3031467:-1:exon
so has part: feature:3028457-3028499:-1:exon
so has part: feature:3026318-3026393:-1:exon
so has part: feature:3025640-3025858:-1:exon
so has part: feature:3023167-3023254:-1:exon
so has part: feature:3022531-3022683:-1:exon
so has part: feature:3021765-3021862:-1:exon
so has part: feature:3020772-3020944:-1:exon
so has part: feature:3019055-3019171:-1:exon
so has part: feature:3017643-3017771:-1:exon
so has part: feature:3016480-3016602:-1:exon
so has part: feature:3014777-3014985:-1:exon
so has part: feature:3012979-3013035:-1:exon
so has part: feature:3012822-3012866:-1:exon
so has part: feature:3011960-3012022:-1:exon
so has part: feature:3008888-3009067:-1:exon
so has part: feature:3007051-3007086:-1:exon
so has part: feature:2995322-2995801:-1:exon
so has part: feature:2994050-2994178:-1:exon
so has part: feature:2992397-2992498:-1:exon
so has part: feature:2991882-2991962:-1:exon
so has part: feature:2989876-2989974:-1:exon

XP_032566190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3036627-3037079:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3033789-3034019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3031363-3031467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3028457-3028499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3026318-3026393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3025640-3025858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3023167-3023254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3022531-3022683:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3021765-3021862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3020772-3020944:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3019055-3019171:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3017643-3017771:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3016480-3016602:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3014777-3014985:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3012979-3013035:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3012822-3012866:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3011960-3012022:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3008888-3009067:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3007051-3007086:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2995322-2995801:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2994050-2994178:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2992397-2992498:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2991882-2991962:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2989876-2989974:-1:exon

EPB41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: EPB41
product: erythrocyte membrane protein band 4.1, transcript variant X16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032710301.1
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
location: complement(join(3001312..3005770,3007036..3007086,3008888..3009067,3011960..3012022,3012822..3012863,3012979..3013035,3014777..3014985,3020772..3020944,3021765..3021862,3022531..3022683,3023167..3023254,3025640..3025858,3026318..3026393,3028457..3028499,3031363..3031467,3033789..3034019,3036627..3037086))
location: region:3001312-3037086:-1
so has part: feature:3036627-3037086:-1:exon
so has part: feature:3033789-3034019:-1:exon
so has part: feature:3031363-3031467:-1:exon
so has part: feature:3028457-3028499:-1:exon
so has part: feature:3026318-3026393:-1:exon
so has part: feature:3025640-3025858:-1:exon
so has part: feature:3023167-3023254:-1:exon
so has part: feature:3022531-3022683:-1:exon
so has part: feature:3021765-3021862:-1:exon
so has part: feature:3020772-3020944:-1:exon
so has part: feature:3014777-3014985:-1:exon
so has part: feature:3012979-3013035:-1:exon
so has part: feature:3012822-3012863:-1:exon
so has part: feature:3011960-3012022:-1:exon
so has part: feature:3008888-3009067:-1:exon
so has part: feature:3007036-3007086:-1:exon
so has part: feature:3001312-3005770:-1:exon

position:3001312:-1
position: 3001312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3036627-3037086:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3033789-3034019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3031363-3031467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3028457-3028499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3026318-3026393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3025640-3025858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3023167-3023254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3022531-3022683:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3021765-3021862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3020772-3020944:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3014777-3014985:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3012979-3013035:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3012822-3012863:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3011960-3012022:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3008888-3009067:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3007036-3007086:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3001312-3005770:-1:exon

position:3005770:-1
position: 3005770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EPB41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: EPB41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein 4.1 isoform X16
translation: MTTEKSPAADADSSDQQQAKEEEGAAEAQKQEASLEEGAQPTSEGQGQKQKASNGDTPTHEEQSKKERRTSEGRGLSRLFSSFLRRPKSQVSEEEKDTDAPKEAGGDQKGAGLGASPDEDILVKAPIAAPEPELKTDPSLDLHSLSSAETQPAQEERRDEQEPEGKDPEDKEEGEAKEECAKPEPKPETPETKADKDLKAAQKTVKRHRNMYCKVVLLDDTIFECAVDKHAKGQELLKKVCDHLNLLEEDYFGLAIWDTPTSRTWLDPAKEIKKQVHGGPWDFTFNVKFYPPDPAQLTEDITRYYLCLQLRQDILTGRLPCSFATLALLGSYTVQSELGDYDPELHGPDYITEFKLAPNQTKELEEKVVELHKTYRSMTPAQADLEFLENAKKLSMYGVDLHQAKDLEGVDITLGVCSSGLLVYKDKLRINRFPWPKVLKISYKRSSFFIKIRPGEQEQYESTIGFKLPSYRAAKKLWKVCVEHHTFFRLTSTEAIPKSRFLALGSKFRYSGRTQAQTRQASALIDRPAPQFERTASKRASRSLDGAVAVITPERSPRPTSAPAIAQSHPAEPAPAKPDVKDVATSKIGKETAKADVRREEFPPEKAKAEPADASKVRKTHIEVTVPTTNGAQPQQPAEKEEELIRMRKKRSKRLDGENIYIRHSNLMLEDLDKPQEEIKKHHANISELKKNFMESVPEPRPSEWDKRLSTHSPFRTLNVNGQIPTGADGVKKVTVLSSERQVGGLEKRERPLLVQDEDKLKKQQIPTETAFPRPASEETLPKVSIAIPEEQKALKKCQLYSSIFPSPRIPFMMSFLLVVALTVWWLLFL
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
location: complement(join(3005519..3005770,3007036..3007086,3008888..3009067,3011960..3012022,3012822..3012863,3012979..3013035,3014777..3014985,3020772..3020944,3021765..3021862,3022531..3022683,3023167..3023254,3025640..3025858,3026318..3026393,3028457..3028499,3031363..3031467,3033789..3034019,3036627..3037079))
location: region:3005519-3037079:-1
so has part: feature:3036627-3037079:-1:exon
so has part: feature:3033789-3034019:-1:exon
so has part: feature:3031363-3031467:-1:exon
so has part: feature:3028457-3028499:-1:exon
so has part: feature:3026318-3026393:-1:exon
so has part: feature:3025640-3025858:-1:exon
so has part: feature:3023167-3023254:-1:exon
so has part: feature:3022531-3022683:-1:exon
so has part: feature:3021765-3021862:-1:exon
so has part: feature:3020772-3020944:-1:exon
so has part: feature:3014777-3014985:-1:exon
so has part: feature:3012979-3013035:-1:exon
so has part: feature:3012822-3012863:-1:exon
so has part: feature:3011960-3012022:-1:exon
so has part: feature:3008888-3009067:-1:exon
so has part: feature:3007036-3007086:-1:exon
so has part: feature:3005519-3005770:-1:exon

XP_032566192.1
type: Protein
SIO_000068: ncbiprotein

position:3005519:-1
position: 3005519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3036627-3037079:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3033789-3034019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3031363-3031467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3028457-3028499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3026318-3026393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3025640-3025858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3023167-3023254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3022531-3022683:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3021765-3021862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3020772-3020944:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3014777-3014985:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3012979-3013035:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3012822-3012863:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3011960-3012022:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3008888-3009067:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3007036-3007086:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3005519-3005770:-1:exon

EPB41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: EPB41
product: erythrocyte membrane protein band 4.1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032710293.1
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
location: complement(join(3005989..3006673,3007051..3007086,3008888..3009067,3011960..3012022,3012822..3012863,3012979..3013035,3014777..3014985,3017643..3017771,3019055..3019171,3020772..3020944,3021765..3021862,3022531..3022683,3023167..3023254,3025640..3025858,3026318..3026393,3028457..3028499,3031363..3031467,3033789..3034019,3036627..3037086,3071619..3071690))
location: region:3005989-3071690:-1
so has part: feature:3071619-3071690:-1:exon
so has part: feature:3036627-3037086:-1:exon
so has part: feature:3033789-3034019:-1:exon
so has part: feature:3031363-3031467:-1:exon
so has part: feature:3028457-3028499:-1:exon
so has part: feature:3026318-3026393:-1:exon
so has part: feature:3025640-3025858:-1:exon
so has part: feature:3023167-3023254:-1:exon
so has part: feature:3022531-3022683:-1:exon
so has part: feature:3021765-3021862:-1:exon
so has part: feature:3020772-3020944:-1:exon
so has part: feature:3019055-3019171:-1:exon
so has part: feature:3017643-3017771:-1:exon
so has part: feature:3014777-3014985:-1:exon
so has part: feature:3012979-3013035:-1:exon
so has part: feature:3012822-3012863:-1:exon
so has part: feature:3011960-3012022:-1:exon
so has part: feature:3008888-3009067:-1:exon
so has part: feature:3007051-3007086:-1:exon
so has part: feature:3005989-3006673:-1:exon

position:3005989:-1
position: 3005989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3071619-3071690:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3036627-3037086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3033789-3034019:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3031363-3031467:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3028457-3028499:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3026318-3026393:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3025640-3025858:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3023167-3023254:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3022531-3022683:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3021765-3021862:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3020772-3020944:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3019055-3019171:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3017643-3017771:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3014777-3014985:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3012979-3013035:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3012822-3012863:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3011960-3012022:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3008888-3009067:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3007051-3007086:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3005989-3006673:-1:exon

position:3006673:-1
position: 3006673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EPB41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: EPB41
product: erythrocyte membrane protein band 4.1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032710291.1
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
location: complement(join(3005989..3006673,3007051..3007086,3008888..3009067,3011960..3012022,3012822..3012866,3012979..3013035,3014777..3014985,3017643..3017771,3019055..3019171,3020772..3020944,3021765..3021862,3022531..3022683,3023167..3023254,3025640..3025858,3026318..3026393,3028457..3028499,3031363..3031467,3033789..3034019,3036627..3037086,3071619..3071690))
location: region:3005989-3071690:-1
so has part: feature:3071619-3071690:-1:exon
so has part: feature:3036627-3037086:-1:exon
so has part: feature:3033789-3034019:-1:exon
so has part: feature:3031363-3031467:-1:exon
so has part: feature:3028457-3028499:-1:exon
so has part: feature:3026318-3026393:-1:exon
so has part: feature:3025640-3025858:-1:exon
so has part: feature:3023167-3023254:-1:exon
so has part: feature:3022531-3022683:-1:exon
so has part: feature:3021765-3021862:-1:exon
so has part: feature:3020772-3020944:-1:exon
so has part: feature:3019055-3019171:-1:exon
so has part: feature:3017643-3017771:-1:exon
so has part: feature:3014777-3014985:-1:exon
so has part: feature:3012979-3013035:-1:exon
so has part: feature:3012822-3012866:-1:exon
so has part: feature:3011960-3012022:-1:exon
so has part: feature:3008888-3009067:-1:exon
so has part: feature:3007051-3007086:-1:exon
so has part: feature:3005989-3006673:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3071619-3071690:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3036627-3037086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3033789-3034019:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3031363-3031467:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3028457-3028499:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3026318-3026393:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3025640-3025858:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3023167-3023254:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3022531-3022683:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3021765-3021862:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3020772-3020944:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3019055-3019171:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3017643-3017771:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3014777-3014985:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3012979-3013035:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3012822-3012866:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3011960-3012022:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3008888-3009067:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3007051-3007086:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3005989-3006673:-1:exon

EPB41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: EPB41
product: erythrocyte membrane protein band 4.1, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032710298.1
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
location: complement(join(3005989..3006673,3007051..3007086,3008888..3009067,3011960..3012022,3012822..3012863,3012979..3013035,3014777..3014985,3020772..3020944,3021765..3021862,3022531..3022683,3023167..3023254,3025640..3025858,3026318..3026393,3028457..3028499,3031363..3031467,3033789..3034019,3036627..3037086,3071619..3071689))
location: region:3005989-3071689:-1
so has part: feature:3071619-3071689:-1:exon
so has part: feature:3036627-3037086:-1:exon
so has part: feature:3033789-3034019:-1:exon
so has part: feature:3031363-3031467:-1:exon
so has part: feature:3028457-3028499:-1:exon
so has part: feature:3026318-3026393:-1:exon
so has part: feature:3025640-3025858:-1:exon
so has part: feature:3023167-3023254:-1:exon
so has part: feature:3022531-3022683:-1:exon
so has part: feature:3021765-3021862:-1:exon
so has part: feature:3020772-3020944:-1:exon
so has part: feature:3014777-3014985:-1:exon
so has part: feature:3012979-3013035:-1:exon
so has part: feature:3012822-3012863:-1:exon
so has part: feature:3011960-3012022:-1:exon
so has part: feature:3008888-3009067:-1:exon
so has part: feature:3007051-3007086:-1:exon
so has part: feature:3005989-3006673:-1:exon

position:3071689:-1
position: 3071689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3071619-3071689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3036627-3037086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3033789-3034019:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3031363-3031467:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3028457-3028499:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3026318-3026393:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3025640-3025858:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3023167-3023254:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3022531-3022683:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3021765-3021862:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3020772-3020944:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3014777-3014985:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3012979-3013035:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3012822-3012863:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3011960-3012022:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3008888-3009067:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3007051-3007086:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3005989-3006673:-1:exon

EPB41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: EPB41
product: erythrocyte membrane protein band 4.1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032710294.1
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
location: complement(join(3005989..3006673,3008888..3009067,3011960..3012022,3012822..3012866,3012979..3013035,3014777..3014985,3017643..3017771,3019055..3019171,3020772..3020944,3021765..3021862,3022531..3022683,3023167..3023254,3025640..3025858,3026318..3026393,3028457..3028499,3031363..3031467,3033789..3034019,3036627..3037086,3071619..3071689))
location: region:3005989-3071689:-1
so has part: feature:3071619-3071689:-1:exon
so has part: feature:3036627-3037086:-1:exon
so has part: feature:3033789-3034019:-1:exon
so has part: feature:3031363-3031467:-1:exon
so has part: feature:3028457-3028499:-1:exon
so has part: feature:3026318-3026393:-1:exon
so has part: feature:3025640-3025858:-1:exon
so has part: feature:3023167-3023254:-1:exon
so has part: feature:3022531-3022683:-1:exon
so has part: feature:3021765-3021862:-1:exon
so has part: feature:3020772-3020944:-1:exon
so has part: feature:3019055-3019171:-1:exon
so has part: feature:3017643-3017771:-1:exon
so has part: feature:3014777-3014985:-1:exon
so has part: feature:3012979-3013035:-1:exon
so has part: feature:3012822-3012866:-1:exon
so has part: feature:3011960-3012022:-1:exon
so has part: feature:3008888-3009067:-1:exon
so has part: feature:3005989-3006673:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3071619-3071689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3036627-3037086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3033789-3034019:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3031363-3031467:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3028457-3028499:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3026318-3026393:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3025640-3025858:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3023167-3023254:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3022531-3022683:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3021765-3021862:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3020772-3020944:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3019055-3019171:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3017643-3017771:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3014777-3014985:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3012979-3013035:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3012822-3012866:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3011960-3012022:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3008888-3009067:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3005989-3006673:-1:exon

EPB41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: EPB41
product: erythrocyte membrane protein band 4.1, transcript variant X17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032710302.1
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
location: complement(join(3005989..3006673,3007051..3007086,3008888..3009067,3014777..3014985,3020772..3020944,3021765..3021862,3022531..3022683,3023167..3023254,3025640..3025858,3026318..3026393,3028457..3028499,3031363..3031467,3033789..3034019,3036627..3037086))
location: region:3005989-3037086:-1
so has part: feature:3036627-3037086:-1:exon
so has part: feature:3033789-3034019:-1:exon
so has part: feature:3031363-3031467:-1:exon
so has part: feature:3028457-3028499:-1:exon
so has part: feature:3026318-3026393:-1:exon
so has part: feature:3025640-3025858:-1:exon
so has part: feature:3023167-3023254:-1:exon
so has part: feature:3022531-3022683:-1:exon
so has part: feature:3021765-3021862:-1:exon
so has part: feature:3020772-3020944:-1:exon
so has part: feature:3014777-3014985:-1:exon
so has part: feature:3008888-3009067:-1:exon
so has part: feature:3007051-3007086:-1:exon
so has part: feature:3005989-3006673:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3036627-3037086:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3033789-3034019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3031363-3031467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3028457-3028499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3026318-3026393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3025640-3025858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3023167-3023254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3022531-3022683:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3021765-3021862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3020772-3020944:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3014777-3014985:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3008888-3009067:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3007051-3007086:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3005989-3006673:-1:exon

EPB41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: EPB41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein 4.1 isoform X17
translation: MTTEKSPAADADSSDQQQAKEEEGAAEAQKQEASLEEGAQPTSEGQGQKQKASNGDTPTHEEQSKKERRTSEGRGLSRLFSSFLRRPKSQVSEEEKDTDAPKEAGGDQKGAGLGASPDEDILVKAPIAAPEPELKTDPSLDLHSLSSAETQPAQEERRDEQEPEGKDPEDKEEGEAKEECAKPEPKPETPETKADKDLKAAQKTVKRHRNMYCKVVLLDDTIFECAVDKHAKGQELLKKVCDHLNLLEEDYFGLAIWDTPTSRTWLDPAKEIKKQVHGGPWDFTFNVKFYPPDPAQLTEDITRYYLCLQLRQDILTGRLPCSFATLALLGSYTVQSELGDYDPELHGPDYITEFKLAPNQTKELEEKVVELHKTYRSMTPAQADLEFLENAKKLSMYGVDLHQAKDLEGVDITLGVCSSGLLVYKDKLRINRFPWPKVLKISYKRSSFFIKIRPGEQEQYESTIGFKLPSYRAAKKLWKVCVEHHTFFRLTSTEAIPKSRFLALGSKFRYSGRTQAQTRQASALIDRPAPQFERTASKRASRSLDGAVAVITPERSPRPTSAPAIAQSHPAEPAPAKPDVKDVATSKIGKETAKADVRREEFPPEKAKAEPADASKDLDKPQEEIKKHHANISELKKNFMESVPEPRPSEWDKRLSTHSPFRTLNVNGQIPTGADGVKKVTVLSSERQSPSYFLPNSHHLGVCKEPVPKYRTDQRRLAQLRELRAKFFLS
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
location: complement(join(3006545..3006673,3007051..3007086,3008888..3009067,3014777..3014985,3020772..3020944,3021765..3021862,3022531..3022683,3023167..3023254,3025640..3025858,3026318..3026393,3028457..3028499,3031363..3031467,3033789..3034019,3036627..3037079))
location: region:3006545-3037079:-1
so has part: feature:3036627-3037079:-1:exon
so has part: feature:3033789-3034019:-1:exon
so has part: feature:3031363-3031467:-1:exon
so has part: feature:3028457-3028499:-1:exon
so has part: feature:3026318-3026393:-1:exon
so has part: feature:3025640-3025858:-1:exon
so has part: feature:3023167-3023254:-1:exon
so has part: feature:3022531-3022683:-1:exon
so has part: feature:3021765-3021862:-1:exon
so has part: feature:3020772-3020944:-1:exon
so has part: feature:3014777-3014985:-1:exon
so has part: feature:3008888-3009067:-1:exon
so has part: feature:3007051-3007086:-1:exon
so has part: feature:3006545-3006673:-1:exon

XP_032566193.1
type: Protein
SIO_000068: ncbiprotein

position:3006545:-1
position: 3006545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3036627-3037079:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3033789-3034019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3031363-3031467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3028457-3028499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3026318-3026393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3025640-3025858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3023167-3023254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3022531-3022683:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3021765-3021862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3020772-3020944:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3014777-3014985:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3008888-3009067:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3007051-3007086:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3006545-3006673:-1:exon

EPB41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: EPB41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein 4.1 isoform X13
translation: MTTEKSPAADADSSDQQQAKEEEGAAEAQKQEASLEEGAQPTSEGQGQKQKASNGDTPTHEEQSKKERRTSEGRGLSRLFSSFLRRPKSQVSEEEKDTDAPKEAGGDQKGAGLGASPDEDILVKAPIAAPEPELKTDPSLDLHSLSSAETQPAQEERRDEQEPEGKDPEDKEEGEAKEECAKPEPKPETPETKADKDLKAAQKTVKRHRNMYCKVVLLDDTIFECAVDKHAKGQELLKKVCDHLNLLEEDYFGLAIWDTPTSRTWLDPAKEIKKQVHGGPWDFTFNVKFYPPDPAQLTEDITRYYLCLQLRQDILTGRLPCSFATLALLGSYTVQSELGDYDPELHGPDYITEFKLAPNQTKELEEKVVELHKTYRSMTPAQADLEFLENAKKLSMYGVDLHQAKDLEGVDITLGVCSSGLLVYKDKLRINRFPWPKVLKISYKRSSFFIKIRPGEQEQYESTIGFKLPSYRAAKKLWKVCVEHHTFFRLTSTEAIPKSRFLALGSKFRYSGRTQAQTRQASALIDRPAPQFERTASKRASRSLDGAVAVITPERSPRPTSAPAIAQSHPAEPAPAKPDVKDVATSKIGKETAKADVRREEFPPEKAKAEPADASKVRKTHIEVTVPTTNGAQPQQPAEKEEELIRMRKKRSKRLDGENIYIRHSNLMLEDLDKPQEEIKKHHANISELKKNFMESVPEPRPSEWDKRLSTHSPFRTLNVNGQIPTGADGVKKVTVLSSERQSPSYFLPNSHHLGVCKEPVPKYRTDQRRLAQLRELRAKFFLS
SIO_010081: EPB41
subclass of: SO_0000673
so part of: EPB41
location: complement(join(3006545..3006673,3007051..3007086,3008888..3009067,3011960..3012022,3012822..3012863,3012979..3013035,3014777..3014985,3020772..3020944,3021765..3021862,3022531..3022683,3023167..3023254,3025640..3025858,3026318..3026393,3028457..3028499,3031363..3031467,3033789..3034019,3036627..3037079))
location: region:3006545-3037079:-1
so has part: feature:3036627-3037079:-1:exon
so has part: feature:3033789-3034019:-1:exon
so has part: feature:3031363-3031467:-1:exon
so has part: feature:3028457-3028499:-1:exon
so has part: feature:3026318-3026393:-1:exon
so has part: feature:3025640-3025858:-1:exon
so has part: feature:3023167-3023254:-1:exon
so has part: feature:3022531-3022683:-1:exon
so has part: feature:3021765-3021862:-1:exon
so has part: feature:3020772-3020944:-1:exon
so has part: feature:3014777-3014985:-1:exon
so has part: feature:3012979-3013035:-1:exon
so has part: feature:3012822-3012863:-1:exon
so has part: feature:3011960-3012022:-1:exon
so has part: feature:3008888-3009067:-1:exon
so has part: feature:3007051-3007086:-1:exon
so has part: feature:3006545-3006673:-1:exon

XP_032566189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3036627-3037079:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3033789-3034019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3031363-3031467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3028457-3028499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3026318-3026393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3025640-3025858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3023167-3023254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3022531-3022683:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3021765-3021862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3020772-3020944:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3014777-3014985:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3012979-3013035:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3012822-3012863:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3011960-3012022:-1:exon