Chiroxiphia lanceolata isolate bChiLan1 chromosome 23, bChiLan1.pri, whole genome shotgun sequence.
type: Entry
definition: Chiroxiphia lanceolata isolate bChiLan1 chromosome 23, bChiLan1.pri, whole genome shotgun sequence.
sequence version: NC_045659.1
sequence date: 2020-02-29
sequence: sequence
division: CON
label: NC_045659.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA603801
dblink: SAMN12620979
keyword: WGS
keyword: RefSeq
source: Chiroxiphia lanceolata (lance-tailed manakin)
organism: Chiroxiphia lanceolata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Pipridae; Chiroxiphia.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020555.1.\nAssembly name: bChiLan1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/01/03. The original whole-genome shotgun project has the\naccession WNMC00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 08-OCT-2019\nAssembly Method :: FALCON v. DNANexus 1.9.0; FALCON-Unzip v.\n DNANexus 1.0.6; purge_haplotigs v.\n v1.0.3+ 1.Nov.2018; scaff10x v. 4.1.0;\n Bionano Solve DLS v. 3.2.1; Salsa HiC v.\n 2.2; Arrow smrtanalysis Pacbio polishing\n & gap filling v. 6.0.0.47841; longranger\n align v. 2.2.2; freebayes Illumina\n polishing v. 1.3.1; gEVAL manual curation\n v. 2019-10-08; VGP assembly pipeline v.\n 1.5\nAssembly Name :: bChiLan1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 67.75x\nSequencing Technology :: PacBio Sequel I CLR; llumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Chiroxiphia lanceolata Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 7394705
topology: linear
so has quality: SO_0000987
location: 1..7394705
location: region:1-7394705:1
RO_0002162: 296741

NC_045659
type: RefSeq
SIO_000068: refseq

PRJNA603801
type: BioProject
SIO_000068: bioproject

SAMN12620979
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7394705:1
position: 7394705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-7394705:1:source
so part of: sequence
organism: Chiroxiphia lanceolata
mol type: genomic DNA
isolate: bChiLan1
chromosome: 23
sex: female
tissue type: isolated red blood cells
dev stage: adult
country: Panama: Isla Boca Btava
lat lon: 8.2166658 N 82.2666656 W
collection date: 14-Apr-2017
collected by: Emily DuVal

296741
type: Taxonomy
SIO_000068: taxonomy

LOC116797700
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116797700
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6126..8044)
location: region:6126-8044:-1
so has part: feature:6126-8044:-1:exon
subclass of: SO_0000011

116797700
type: Gene
SIO_000068: ncbigene

position:6126:-1
position: 6126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8044:-1
position: 8044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6126-8044:-1:exon

LOC116797700
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116797700
product: uncharacterized LOC116797700
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004360717.1
SIO_010081: LOC116797700
subclass of: SO_0000673
so part of: LOC116797700
location: complement(join(6126..6380,6463..6804,7731..8044))
location: region:6126-8044:-1
so has part: feature:7731-8044:-1:exon
so has part: feature:6463-6804:-1:exon
so has part: feature:6126-6380:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7731-8044:-1:exon

position:7731:-1
position: 7731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6463-6804:-1:exon

position:6463:-1
position: 6463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6804:-1
position: 6804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6126-6380:-1:exon

position:6380:-1
position: 6380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116797702
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116797702
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12646..15374)
location: region:12646-15374:-1
so has part: feature:12646-15374:-1:exon
subclass of: SO_0000011

116797702
type: Gene
SIO_000068: ncbigene

position:12646:-1
position: 12646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15374:-1
position: 15374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12646-15374:-1:exon

LOC116797702
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116797702
product: uncharacterized LOC116797702
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004360723.1
SIO_010081: LOC116797702
subclass of: SO_0000673
so part of: LOC116797702
location: complement(join(12646..12795,13790..13998,14043..14132,15017..15374))
location: region:12646-15374:-1
so has part: feature:15017-15374:-1:exon
so has part: feature:14043-14132:-1:exon
so has part: feature:13790-13998:-1:exon
so has part: feature:12646-12795:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15017-15374:-1:exon

position:15017:-1
position: 15017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14043-14132:-1:exon

position:14043:-1
position: 14043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14132:-1
position: 14132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13790-13998:-1:exon

position:13790:-1
position: 13790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13998:-1
position: 13998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12646-12795:-1:exon

position:12795:-1
position: 12795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116797701
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116797701
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(17798..20502)
location: region:17798-20502:-1
so has part: feature:17798-20502:-1:exon
subclass of: SO_0000011

116797701
type: Gene
SIO_000068: ncbigene

position:17798:-1
position: 17798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20502:-1
position: 20502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17798-20502:-1:exon

LOC116797701
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116797701
product: uncharacterized LOC116797701, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004360722.1
SIO_010081: LOC116797701
subclass of: SO_0000673
so part of: LOC116797701
location: complement(join(17798..18071,18148..18221,18304..18985,20018..20054,20137..20502))
location: region:17798-20502:-1
so has part: feature:20137-20502:-1:exon
so has part: feature:20018-20054:-1:exon
so has part: feature:18304-18985:-1:exon
so has part: feature:18148-18221:-1:exon
so has part: feature:17798-18071:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20137-20502:-1:exon

position:20137:-1
position: 20137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:20018-20054:-1:exon

position:20018:-1
position: 20018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20054:-1
position: 20054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:18304-18985:-1:exon

position:18304:-1
position: 18304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18985:-1
position: 18985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:18148-18221:-1:exon

position:18148:-1
position: 18148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18221:-1
position: 18221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:17798-18071:-1:exon

position:18071:-1
position: 18071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116797701
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116797701
product: uncharacterized LOC116797701, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004360719.1
SIO_010081: LOC116797701
subclass of: SO_0000673
so part of: LOC116797701
location: complement(join(17798..18071,18148..18221,18304..18985,19987..20054,20137..20502))
location: region:17798-20502:-1
so has part: feature:20137-20502:-1:exon
so has part: feature:19987-20054:-1:exon
so has part: feature:18304-18985:-1:exon
so has part: feature:18148-18221:-1:exon
so has part: feature:17798-18071:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20137-20502:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19987-20054:-1:exon

position:19987:-1
position: 19987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:18304-18985:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:18148-18221:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17798-18071:-1:exon

LOC116797701
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116797701
product: uncharacterized LOC116797701, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004360721.1
SIO_010081: LOC116797701
subclass of: SO_0000673
so part of: LOC116797701
location: complement(join(17798..18071,18185..18221,18304..18985,19981..20054,20137..20502))
location: region:17798-20502:-1
so has part: feature:20137-20502:-1:exon
so has part: feature:19981-20054:-1:exon
so has part: feature:18304-18985:-1:exon
so has part: feature:18185-18221:-1:exon
so has part: feature:17798-18071:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20137-20502:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19981-20054:-1:exon

position:19981:-1
position: 19981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:18304-18985:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:18185-18221:-1:exon

position:18185:-1
position: 18185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:17798-18071:-1:exon

LOC116797701
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116797701
product: uncharacterized LOC116797701, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004360720.1
SIO_010081: LOC116797701
subclass of: SO_0000673
so part of: LOC116797701
location: complement(join(17798..18071,18154..18221,18304..18985,19981..20054,20137..20502))
location: region:17798-20502:-1
so has part: feature:20137-20502:-1:exon
so has part: feature:19981-20054:-1:exon
so has part: feature:18304-18985:-1:exon
so has part: feature:18154-18221:-1:exon
so has part: feature:17798-18071:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20137-20502:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19981-20054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18304-18985:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:18154-18221:-1:exon

position:18154:-1
position: 18154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:17798-18071:-1:exon

LOC116797701
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116797701
product: uncharacterized LOC116797701, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004360718.1
SIO_010081: LOC116797701
subclass of: SO_0000673
so part of: LOC116797701
location: complement(join(17798..18071,18148..18221,18304..18985,19981..20054,20137..20502))
location: region:17798-20502:-1
so has part: feature:20137-20502:-1:exon
so has part: feature:19981-20054:-1:exon
so has part: feature:18304-18985:-1:exon
so has part: feature:18148-18221:-1:exon
so has part: feature:17798-18071:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20137-20502:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19981-20054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18304-18985:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:18148-18221:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17798-18071:-1:exon

LOC116797703
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116797703
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(23432..24386)
location: region:23432-24386:-1
so has part: feature:23432-24386:-1:exon
subclass of: SO_0000011

116797703
type: Gene
SIO_000068: ncbigene

position:23432:-1
position: 23432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24386:-1
position: 24386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23432-24386:-1:exon

LOC116797703
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116797703
product: uncharacterized LOC116797703, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004360725.1
SIO_010081: LOC116797703
subclass of: SO_0000673
so part of: LOC116797703
location: complement(join(23432..23747,23832..23905,24014..24386))
location: region:23432-24386:-1
so has part: feature:24014-24386:-1:exon
so has part: feature:23832-23905:-1:exon
so has part: feature:23432-23747:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24014-24386:-1:exon

position:24014:-1
position: 24014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:23832-23905:-1:exon

position:23832:-1
position: 23832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23905:-1
position: 23905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:23432-23747:-1:exon

position:23747:-1
position: 23747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116797703
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116797703
product: uncharacterized LOC116797703, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004360724.1
SIO_010081: LOC116797703
subclass of: SO_0000673
so part of: LOC116797703
location: complement(join(23432..23747,23832..23905,23995..24386))
location: region:23432-24386:-1
so has part: feature:23995-24386:-1:exon
so has part: feature:23832-23905:-1:exon
so has part: feature:23432-23747:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23995-24386:-1:exon

position:23995:-1
position: 23995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:23832-23905:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:23432-23747:-1:exon

LOC116797699
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116797699
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(27575..28628)
location: region:27575-28628:-1
so has part: feature:27575-28628:-1:exon
subclass of: SO_0000011

116797699
type: Gene
SIO_000068: ncbigene

position:27575:-1
position: 27575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28628:-1
position: 28628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27575-28628:-1:exon

LOC116797699
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116797699
product: uncharacterized LOC116797699
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004360716.1
SIO_010081: LOC116797699
subclass of: SO_0000673
so part of: LOC116797699
location: complement(join(27575..27785,28322..28628))
location: region:27575-28628:-1
so has part: feature:28322-28628:-1:exon
so has part: feature:27575-27785:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28322-28628:-1:exon

position:28322:-1
position: 28322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27575-27785:-1:exon

position:27785:-1
position: 27785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116797698
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116797698
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(37048..39860)
location: region:37048-39860:-1
so has part: feature:37048-39860:-1:exon
subclass of: SO_0000011

116797698
type: Gene
SIO_000068: ncbigene

position:37048:-1
position: 37048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39860:-1
position: 39860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37048-39860:-1:exon

LOC116797698
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116797698
product: uncharacterized LOC116797698, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004360715.1
SIO_010081: LOC116797698
subclass of: SO_0000673
so part of: LOC116797698
location: complement(join(37048..37224,37694..37788,37897..37975,38525..38563,39716..39860))
location: region:37048-39860:-1
so has part: feature:39716-39860:-1:exon
so has part: feature:38525-38563:-1:exon
so has part: feature:37897-37975:-1:exon
so has part: feature:37694-37788:-1:exon
so has part: feature:37048-37224:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39716-39860:-1:exon

position:39716:-1
position: 39716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:38525-38563:-1:exon

position:38525:-1
position: 38525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38563:-1
position: 38563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:37897-37975:-1:exon

position:37897:-1
position: 37897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37975:-1
position: 37975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:37694-37788:-1:exon

position:37694:-1
position: 37694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37788:-1
position: 37788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:37048-37224:-1:exon

position:37224:-1
position: 37224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116797698
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116797698
product: uncharacterized LOC116797698, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004360714.1
SIO_010081: LOC116797698
subclass of: SO_0000673
so part of: LOC116797698
location: complement(join(37048..37224,37694..37788,37897..37991,38525..38563,39716..39860))
location: region:37048-39860:-1
so has part: feature:39716-39860:-1:exon
so has part: feature:38525-38563:-1:exon
so has part: feature:37897-37991:-1:exon
so has part: feature:37694-37788:-1:exon
so has part: feature:37048-37224:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39716-39860:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:38525-38563:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:37897-37991:-1:exon

position:37991:-1
position: 37991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:37694-37788:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:37048-37224:-1:exon

LOC116797698
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116797698
product: uncharacterized LOC116797698, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004360713.1
SIO_010081: LOC116797698
subclass of: SO_0000673
so part of: LOC116797698
location: complement(join(37048..37224,37694..37788,37897..37991,38525..38628,39716..39851))
location: region:37048-39851:-1
so has part: feature:39716-39851:-1:exon
so has part: feature:38525-38628:-1:exon
so has part: feature:37897-37991:-1:exon
so has part: feature:37694-37788:-1:exon
so has part: feature:37048-37224:-1:exon

position:39851:-1
position: 39851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39716-39851:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:38525-38628:-1:exon

position:38628:-1
position: 38628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:37897-37991:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:37694-37788:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:37048-37224:-1:exon

LOC116797757
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116797757
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(40262..59860)
location: region:40262-59860:-1
so has part: feature:40262-59860:-1:exon
subclass of: SO_0000010

116797757
type: Gene
SIO_000068: ncbigene

position:40262:-1
position: 40262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59860:-1
position: 59860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40262-59860:-1:exon

LOC116797757
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116797757
product: uncharacterized LOC116797757
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 70% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032709583.1
SIO_010081: LOC116797757
subclass of: SO_0000673
so part of: LOC116797757
location: complement(join(40262..40401,40749..40864,48634..48769,48960..49072,49543..49637,57149..57162,57733..57832,58569..58607,59659..59726,59759..59860))
location: region:40262-59860:-1
so has part: feature:59759-59860:-1:exon
so has part: feature:59659-59726:-1:exon
so has part: feature:58569-58607:-1:exon
so has part: feature:57733-57832:-1:exon
so has part: feature:57149-57162:-1:exon
so has part: feature:49543-49637:-1:exon
so has part: feature:48960-49072:-1:exon
so has part: feature:48634-48769:-1:exon
so has part: feature:40749-40864:-1:exon
so has part: feature:40262-40401:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:59759-59860:-1:exon

position:59759:-1
position: 59759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:59659-59726:-1:exon

position:59659:-1
position: 59659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59726:-1
position: 59726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:58569-58607:-1:exon

position:58569:-1
position: 58569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58607:-1
position: 58607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:57733-57832:-1:exon

position:57733:-1
position: 57733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57832:-1
position: 57832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:57149-57162:-1:exon

position:57149:-1
position: 57149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57162:-1
position: 57162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:49543-49637:-1:exon

position:49543:-1
position: 49543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49637:-1
position: 49637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:48960-49072:-1:exon

position:48960:-1
position: 48960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49072:-1
position: 49072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:48634-48769:-1:exon

position:48634:-1
position: 48634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48769:-1
position: 48769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:40749-40864:-1:exon

position:40749:-1
position: 40749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40864:-1
position: 40864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:40262-40401:-1:exon

position:40401:-1
position: 40401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116797757
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116797757
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116797757
translation: MLSGLRRRFFPPEATHGGRSDGRGRGRSSASPAASGDRGQGKRQVTKLMEKKTKGLEAPSFPSVAVDVPDASGRTNPVALRSSVLCCVPAGEDFLAPSFPSVAVDVPDASGRTNPVALRSSMPCACSILYKTKLPFLVGMDWPGFGNLAPRKTKVTSSNRGRLSAPLGEPQCLAGAERASREVFTWSASGTILPEASARAFFLSDWTVKLEPKKRRGSGSKKAKPGGGVGKVGTPAPAQSLARRRRSRARKSAKPTVKMAPPGPELRRDHTKDGGPARKFAPGHTQDGAARTAT
SIO_010081: LOC116797757
subclass of: SO_0000673
so part of: LOC116797757
location: complement(join(40262..40401,40749..40864,48634..48769,48960..49072,49543..49637,57149..57162,57733..57832,58569..58607,59659..59726,59759..59822))
location: region:40262-59822:-1
so has part: feature:59759-59822:-1:exon
so has part: feature:59659-59726:-1:exon
so has part: feature:58569-58607:-1:exon
so has part: feature:57733-57832:-1:exon
so has part: feature:57149-57162:-1:exon
so has part: feature:49543-49637:-1:exon
so has part: feature:48960-49072:-1:exon
so has part: feature:48634-48769:-1:exon
so has part: feature:40749-40864:-1:exon
so has part: feature:40262-40401:-1:exon

XP_032565474.1
type: Protein
SIO_000068: ncbiprotein

position:59822:-1
position: 59822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59759-59822:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:59659-59726:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:58569-58607:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:57733-57832:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:57149-57162:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:49543-49637:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:48960-49072:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:48634-48769:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:40749-40864:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:40262-40401:-1:exon

C2CD2L
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: C2CD2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(67373..85225)
location: region:67373-85225:-1
so has part: feature:67373-85225:-1:exon
subclass of: SO_0000010

116797697
type: Gene
SIO_000068: ncbigene

position:67373:-1
position: 67373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85225:-1
position: 85225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67373-85225:-1:exon

C2CD2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: C2CD2L
product: C2CD2 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032709497.1
SIO_010081: C2CD2L
subclass of: SO_0000673
so part of: C2CD2L
location: complement(join(67373..73045,74465..74747,75231..75364,75976..76077,77406..77577,77873..78000,78583..78647,79176..79299,79465..79582,80171..80284,81122..81232,82640..82759,83151..83246,84890..85225))
location: region:67373-85225:-1
so has part: feature:84890-85225:-1:exon
so has part: feature:83151-83246:-1:exon
so has part: feature:82640-82759:-1:exon
so has part: feature:81122-81232:-1:exon
so has part: feature:80171-80284:-1:exon
so has part: feature:79465-79582:-1:exon
so has part: feature:79176-79299:-1:exon
so has part: feature:78583-78647:-1:exon
so has part: feature:77873-78000:-1:exon
so has part: feature:77406-77577:-1:exon
so has part: feature:75976-76077:-1:exon
so has part: feature:75231-75364:-1:exon
so has part: feature:74465-74747:-1:exon
so has part: feature:67373-73045:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:84890-85225:-1:exon

position:84890:-1
position: 84890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:83151-83246:-1:exon

position:83151:-1
position: 83151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83246:-1
position: 83246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:82640-82759:-1:exon

position:82640:-1
position: 82640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82759:-1
position: 82759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:81122-81232:-1:exon

position:81122:-1
position: 81122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81232:-1
position: 81232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:80171-80284:-1:exon

position:80171:-1
position: 80171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80284:-1
position: 80284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:79465-79582:-1:exon

position:79465:-1
position: 79465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79582:-1
position: 79582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:79176-79299:-1:exon

position:79176:-1
position: 79176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79299:-1
position: 79299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:78583-78647:-1:exon

position:78583:-1
position: 78583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78647:-1
position: 78647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:77873-78000:-1:exon

position:77873:-1
position: 77873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78000:-1
position: 78000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:77406-77577:-1:exon

position:77406:-1
position: 77406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77577:-1
position: 77577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:75976-76077:-1:exon

position:75976:-1
position: 75976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76077:-1
position: 76077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:75231-75364:-1:exon

position:75231:-1
position: 75231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75364:-1
position: 75364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:74465-74747:-1:exon

position:74465:-1
position: 74465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74747:-1
position: 74747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:67373-73045:-1:exon

position:73045:-1
position: 73045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C2CD2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: C2CD2L
product: C2CD2 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032709496.1
SIO_010081: C2CD2L
subclass of: SO_0000673
so part of: C2CD2L
location: complement(join(67373..73045,74465..74747,75231..75364,75976..76077,77406..77577,77873..78000,78583..78647,79176..79299,79465..79582,80171..80287,81122..81232,82640..82759,83151..83246,84890..85225))
location: region:67373-85225:-1
so has part: feature:84890-85225:-1:exon
so has part: feature:83151-83246:-1:exon
so has part: feature:82640-82759:-1:exon
so has part: feature:81122-81232:-1:exon
so has part: feature:80171-80287:-1:exon
so has part: feature:79465-79582:-1:exon
so has part: feature:79176-79299:-1:exon
so has part: feature:78583-78647:-1:exon
so has part: feature:77873-78000:-1:exon
so has part: feature:77406-77577:-1:exon
so has part: feature:75976-76077:-1:exon
so has part: feature:75231-75364:-1:exon
so has part: feature:74465-74747:-1:exon
so has part: feature:67373-73045:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:84890-85225:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:83151-83246:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82640-82759:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:81122-81232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:80171-80287:-1:exon

position:80287:-1
position: 80287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:79465-79582:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:79176-79299:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:78583-78647:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:77873-78000:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:77406-77577:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:75976-76077:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:75231-75364:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:74465-74747:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:67373-73045:-1:exon

C2CD2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: C2CD2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid transfer protein C2CD2L isoform X2
translation: MGPDLGWAALVLLFAASLLTVAAWLLQYWRSAALRAPRRRGAAAEEAGARALLAALLALRSLREQWQRAWVRALNSQARRHGSSVQITFEEGPQLPPAANINCVTCKGQLDRGMVLCCHLSAEAVKFPVSVTQQSPVAVSVDTYHVTLAVMQAQVEIHLEEIENEGLLVSWTFKDRPDLDLLVLPRLQLPEDEGRADLSTIRDLIEDTIVSTQPAMTVNLMACTAGASAVPSNKLIRESPSGVAAAPLGSKLLLRNLRVLNLGCQGKGGVGEICCVAELDSPPQQKWTRPMTAGSASAAGEMEWNEELFLELGPKSKELKLQVLGNSDRMGNVLLAHATLLIDSLGKQPSGRHVCSLAPGPGQSLTAEATITLELLFQESPASLNAQHTTSLRTSITPTKKVEMDRTIMPDGTIVTTVTTIQSRPKADCKLDSPSRSPSKVEVTEKKTTVLLETGCPRGPLPSSSRDGHMPNGLDPVAETAIRQLTETNNKTTKKTPTKRSTLIISGVSKVPIAQDEMALSLGYAASLEPTAFGDSAAESTADQMHDSTESSQPLEASLLRQRASQELDETTRSDISERPSVEDAESETGSTGALETRSLKDHKVSFLRSGTKLIFRRRSKQKEAGLSQSHDDLSNVTANSVARKKAGSFSHRLIKRFSFKSKSKPKGSDSTSAGEN
SIO_010081: C2CD2L
subclass of: SO_0000673
so part of: C2CD2L
location: complement(join(72825..73045,74465..74747,75231..75364,75976..76077,77406..77577,77873..78000,78583..78647,79176..79299,79465..79582,80171..80284,81122..81232,82640..82759,83151..83246,84890..85135))
location: region:72825-85135:-1
so has part: feature:84890-85135:-1:exon
so has part: feature:83151-83246:-1:exon
so has part: feature:82640-82759:-1:exon
so has part: feature:81122-81232:-1:exon
so has part: feature:80171-80284:-1:exon
so has part: feature:79465-79582:-1:exon
so has part: feature:79176-79299:-1:exon
so has part: feature:78583-78647:-1:exon
so has part: feature:77873-78000:-1:exon
so has part: feature:77406-77577:-1:exon
so has part: feature:75976-76077:-1:exon
so has part: feature:75231-75364:-1:exon
so has part: feature:74465-74747:-1:exon
so has part: feature:72825-73045:-1:exon

XP_032565388.1
type: Protein
SIO_000068: ncbiprotein

position:72825:-1
position: 72825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85135:-1
position: 85135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84890-85135:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:83151-83246:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82640-82759:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:81122-81232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:80171-80284:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:79465-79582:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:79176-79299:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:78583-78647:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:77873-78000:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:77406-77577:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:75976-76077:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:75231-75364:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:74465-74747:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:72825-73045:-1:exon

C2CD2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: C2CD2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid transfer protein C2CD2L isoform X1
translation: MGPDLGWAALVLLFAASLLTVAAWLLQYWRSAALRAPRRRGAAAEEAGARALLAALLALRSLREQWQRAWVRALNSQARRHGSSVQITFEEGPQLPPAANINCVTCKGQLDRGMVLCCHLSAEAVKFPVSVTQQSPVAVSVDTYHVTLAVMQAQVEIHLEEIENEGLLVSWTFKDRPDLDLLVLPRLQLPEKDEGRADLSTIRDLIEDTIVSTQPAMTVNLMACTAGASAVPSNKLIRESPSGVAAAPLGSKLLLRNLRVLNLGCQGKGGVGEICCVAELDSPPQQKWTRPMTAGSASAAGEMEWNEELFLELGPKSKELKLQVLGNSDRMGNVLLAHATLLIDSLGKQPSGRHVCSLAPGPGQSLTAEATITLELLFQESPASLNAQHTTSLRTSITPTKKVEMDRTIMPDGTIVTTVTTIQSRPKADCKLDSPSRSPSKVEVTEKKTTVLLETGCPRGPLPSSSRDGHMPNGLDPVAETAIRQLTETNNKTTKKTPTKRSTLIISGVSKVPIAQDEMALSLGYAASLEPTAFGDSAAESTADQMHDSTESSQPLEASLLRQRASQELDETTRSDISERPSVEDAESETGSTGALETRSLKDHKVSFLRSGTKLIFRRRSKQKEAGLSQSHDDLSNVTANSVARKKAGSFSHRLIKRFSFKSKSKPKGSDSTSAGEN
SIO_010081: C2CD2L
subclass of: SO_0000673
so part of: C2CD2L
location: complement(join(72825..73045,74465..74747,75231..75364,75976..76077,77406..77577,77873..78000,78583..78647,79176..79299,79465..79582,80171..80287,81122..81232,82640..82759,83151..83246,84890..85135))
location: region:72825-85135:-1
so has part: feature:84890-85135:-1:exon
so has part: feature:83151-83246:-1:exon
so has part: feature:82640-82759:-1:exon
so has part: feature:81122-81232:-1:exon
so has part: feature:80171-80287:-1:exon
so has part: feature:79465-79582:-1:exon
so has part: feature:79176-79299:-1:exon
so has part: feature:78583-78647:-1:exon
so has part: feature:77873-78000:-1:exon
so has part: feature:77406-77577:-1:exon
so has part: feature:75976-76077:-1:exon
so has part: feature:75231-75364:-1:exon
so has part: feature:74465-74747:-1:exon
so has part: feature:72825-73045:-1:exon

XP_032565387.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84890-85135:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:83151-83246:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82640-82759:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:81122-81232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:80171-80287:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:79465-79582:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:79176-79299:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:78583-78647:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:77873-78000:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:77406-77577:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:75976-76077:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:75231-75364:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:74465-74747:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:72825-73045:-1:exon

DPAGT1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: DPAGT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 86436..91780
location: region:86436-91780:1
so has part: feature:86436-91780:1:exon
subclass of: SO_0000010

116797704
type: Gene
SIO_000068: ncbigene

position:86436:1
position: 86436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91780:1
position: 91780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86436-91780:1:exon

DPAGT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: DPAGT1
product: dolichyl-phosphate N-acetylglucosaminephosphotransferase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 9 long SRA reads, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_032709499.1
SIO_010081: DPAGT1
subclass of: SO_0000673
so part of: DPAGT1
location: join(86436..86816,86896..87016,87102..87315,87846..87992,88125..88209,88670..88858,89474..89561,89927..90082,91194..91780)
location: region:86436-91780:1
so has part: feature:86436-86816:1:exon
so has part: feature:86896-87016:1:exon
so has part: feature:87102-87315:1:exon
so has part: feature:87846-87992:1:exon
so has part: feature:88125-88209:1:exon
so has part: feature:88670-88858:1:exon
so has part: feature:89474-89561:1:exon
so has part: feature:89927-90082:1:exon
so has part: feature:91194-91780:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:86436-86816:1:exon

position:86816:1
position: 86816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:86896-87016:1:exon

position:86896:1
position: 86896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87016:1
position: 87016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:87102-87315:1:exon

position:87102:1
position: 87102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87315:1
position: 87315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:87846-87992:1:exon

position:87846:1
position: 87846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87992:1
position: 87992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:88125-88209:1:exon

position:88125:1
position: 88125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88209:1
position: 88209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:88670-88858:1:exon

position:88670:1
position: 88670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88858:1
position: 88858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:89474-89561:1:exon

position:89474:1
position: 89474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89561:1
position: 89561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:89927-90082:1:exon

position:89927:1
position: 89927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90082:1
position: 90082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:91194-91780:1:exon

position:91194:1
position: 91194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DPAGT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: DPAGT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase
translation: MAALPAVPLLINLCGSLLGFAATLTLIPAFTDRFLAARLFGEDLNKASRRPVPEAQGVISGAVFLIILFCFIPVPFLRCFVEEQCAAFPHDEFVELIGSLLAICCMIFLGFADDVLNLRWRHKLLLPTMASLPLLMVYFTNFGNTTIVVPKPFRVLLGMHLDLGILYYVYMGMLAVFCTNAINILAGINGIEAGQSLVIAASIIIFNIVELNGDYRDDHIFSLYFMIPFFFTTLGLFYHNWYPSRVFVGDTFCYFAGMTFAVVGILGHFSKTMLLFFIPQVLNFLYSLPQLFHIIPCPRHRLPRLNPTTGKLEMSYSKFKTKSLSALGSNILKVVKILHVVDVRSGMDEDGEYTECNNMTLINFVIKLIGPTQERNLTLLLLLIQVLGSTIAFSIRYQLVRLFYDV
SIO_010081: DPAGT1
subclass of: SO_0000673
so part of: DPAGT1
location: join(86662..86816,86896..87016,87102..87315,87846..87992,88125..88209,88670..88858,89474..89561,89927..90082,91194..91259)
location: region:86662-91259:1
so has part: feature:86662-86816:1:exon
so has part: feature:86896-87016:1:exon
so has part: feature:87102-87315:1:exon
so has part: feature:87846-87992:1:exon
so has part: feature:88125-88209:1:exon
so has part: feature:88670-88858:1:exon
so has part: feature:89474-89561:1:exon
so has part: feature:89927-90082:1:exon
so has part: feature:91194-91259:1:exon

XP_032565390.1
type: Protein
SIO_000068: ncbiprotein

position:86662:1
position: 86662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91259:1
position: 91259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86662-86816:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86896-87016:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:87102-87315:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:87846-87992:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:88125-88209:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:88670-88858:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:89474-89561:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89927-90082:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:91194-91259:1:exon

LOC116797706
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116797706
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 93802..94547
location: region:93802-94547:1
so has part: feature:93802-94547:1:exon
subclass of: SO_0000010

116797706
type: Gene
SIO_000068: ncbigene

position:93802:1
position: 93802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94547:1
position: 94547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93802-94547:1:exon

LOC116797706
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116797706
product: histone H2A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 54 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032709502.1
SIO_010081: LOC116797706
subclass of: SO_0000673
so part of: LOC116797706
location: 93802..94547
location: region:93802-94547:1
so has part: feature:93802-94547:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:93802-94547:1:exon

LOC116797706
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116797706
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H2A
translation: MSGRGKSGGKARAKAKSRSSRAGLQFPVGRVHRLLRRGHYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTSGGAASPAKAGKKGSGQQSQEY
SIO_010081: LOC116797706
subclass of: SO_0000673
so part of: LOC116797706
location: 93863..94294
location: region:93863-94294:1
so has part: feature:93863-94294:1:exon

XP_032565393.1
type: Protein
SIO_000068: ncbiprotein

position:93863:1
position: 93863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94294:1
position: 94294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93863-94294:1:exon

HMBS
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: HMBS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(95046..104574)
location: region:95046-104574:-1
so has part: feature:95046-104574:-1:exon
subclass of: SO_0000010

116797705
type: Gene
SIO_000068: ncbigene

position:95046:-1
position: 95046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104574:-1
position: 104574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95046-104574:-1:exon

HMBS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: HMBS
product: hydroxymethylbilane synthase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 1 long SRA read, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_032709501.1
SIO_010081: HMBS
subclass of: SO_0000673
so part of: HMBS
location: complement(join(95046..95512,95733..95819,96363..96416,96657..96776,97453..97491,98007..98120,98791..98866,100335..100412,100716..100793,101907..101962,102062..102111,102787..102859,104386..104574))
location: region:95046-104574:-1
so has part: feature:104386-104574:-1:exon
so has part: feature:102787-102859:-1:exon
so has part: feature:102062-102111:-1:exon
so has part: feature:101907-101962:-1:exon
so has part: feature:100716-100793:-1:exon
so has part: feature:100335-100412:-1:exon
so has part: feature:98791-98866:-1:exon
so has part: feature:98007-98120:-1:exon
so has part: feature:97453-97491:-1:exon
so has part: feature:96657-96776:-1:exon
so has part: feature:96363-96416:-1:exon
so has part: feature:95733-95819:-1:exon
so has part: feature:95046-95512:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:104386-104574:-1:exon

position:104386:-1
position: 104386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:102787-102859:-1:exon

position:102787:-1
position: 102787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102859:-1
position: 102859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:102062-102111:-1:exon

position:102062:-1
position: 102062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102111:-1
position: 102111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:101907-101962:-1:exon

position:101907:-1
position: 101907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101962:-1
position: 101962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:100716-100793:-1:exon

position:100716:-1
position: 100716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100793:-1
position: 100793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:100335-100412:-1:exon

position:100335:-1
position: 100335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100412:-1
position: 100412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:98791-98866:-1:exon

position:98791:-1
position: 98791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98866:-1
position: 98866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:98007-98120:-1:exon

position:98007:-1
position: 98007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98120:-1
position: 98120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:97453-97491:-1:exon

position:97453:-1
position: 97453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97491:-1
position: 97491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:96657-96776:-1:exon

position:96657:-1
position: 96657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96776:-1
position: 96776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:96363-96416:-1:exon

position:96363:-1
position: 96363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96416:-1
position: 96416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:95733-95819:-1:exon

position:95733:-1
position: 95733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95819:-1
position: 95819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:95046-95512:-1:exon

position:95512:-1
position: 95512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HMBS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: HMBS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: porphobilinogen deaminase
translation: MAEPGTGAAGGGRDRAGNGTGSGGAGDDPGADPPLPRGENGVEGRAVRVGTRRSQLARIQTDSVVTILRELYPDLHFEIVAMSTTGDKILDTALSKIGEKSLFTKELENALEKNEVDLVVHSLKDLPTSLPPGFTIGAVCKRENPLDAVVFHPKNCGKTLSLLPEKSVIGTSSLRRAAQLKKKFPQLQFRDIRGNLNTRLKKLDEKEDFSAIILAAAGLKRMGWEHRIGQLLGPEDCLYAVGQGALAVEVRAKDQEILNMVSALHDADTVLCCIAERAFMKRLEGGCSVPVAVSTLLKDGQLYLTGAVYSLDGSDSLKETMQTSVNYPHQNEDGPNDDVQHVGITAKSVPNQAQEAAENLGVELANLLLSKGAKHILSVARQLNDTR
SIO_010081: HMBS
subclass of: SO_0000673
so part of: HMBS
location: complement(join(95339..95512,95733..95819,96363..96416,96657..96776,97453..97491,98007..98120,98791..98866,100335..100412,100716..100793,101907..101962,102062..102111,102787..102859,104386..104550))
location: region:95339-104550:-1
so has part: feature:104386-104550:-1:exon
so has part: feature:102787-102859:-1:exon
so has part: feature:102062-102111:-1:exon
so has part: feature:101907-101962:-1:exon
so has part: feature:100716-100793:-1:exon
so has part: feature:100335-100412:-1:exon
so has part: feature:98791-98866:-1:exon
so has part: feature:98007-98120:-1:exon
so has part: feature:97453-97491:-1:exon
so has part: feature:96657-96776:-1:exon
so has part: feature:96363-96416:-1:exon
so has part: feature:95733-95819:-1:exon
so has part: feature:95339-95512:-1:exon

XP_032565392.1
type: Protein
SIO_000068: ncbiprotein

position:95339:-1
position: 95339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104550:-1
position: 104550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104386-104550:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:102787-102859:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:102062-102111:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:101907-101962:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:100716-100793:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:100335-100412:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:98791-98866:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:98007-98120:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:97453-97491:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:96657-96776:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:96363-96416:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:95733-95819:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:95339-95512:-1:exon

VPS11
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: VPS11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(104737..114516)
location: region:104737-114516:-1
so has part: feature:104737-114516:-1:exon
subclass of: SO_0000010

116797658
type: Gene
SIO_000068: ncbigene

position:104737:-1
position: 104737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114516:-1
position: 114516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104737-114516:-1:exon

VPS11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: VPS11
product: VPS11 core subunit of CORVET and HOPS complexes, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 ESTs, 4 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032709384.1
SIO_010081: VPS11
subclass of: SO_0000673
so part of: VPS11
location: complement(join(104737..104986,105670..105892,106011..106182,106767..106969,107265..107404,107883..108044,108878..109066,109552..109695,110100..110286,111007..111158,111433..111634,112038..112285,112387..112550,113655..113727,113917..114065,114348..114516))
location: region:104737-114516:-1
so has part: feature:114348-114516:-1:exon
so has part: feature:113917-114065:-1:exon
so has part: feature:113655-113727:-1:exon
so has part: feature:112387-112550:-1:exon
so has part: feature:112038-112285:-1:exon
so has part: feature:111433-111634:-1:exon
so has part: feature:111007-111158:-1:exon
so has part: feature:110100-110286:-1:exon
so has part: feature:109552-109695:-1:exon
so has part: feature:108878-109066:-1:exon
so has part: feature:107883-108044:-1:exon
so has part: feature:107265-107404:-1:exon
so has part: feature:106767-106969:-1:exon
so has part: feature:106011-106182:-1:exon
so has part: feature:105670-105892:-1:exon
so has part: feature:104737-104986:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:114348-114516:-1:exon

position:114348:-1
position: 114348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:113917-114065:-1:exon

position:113917:-1
position: 113917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114065:-1
position: 114065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:113655-113727:-1:exon

position:113655:-1
position: 113655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113727:-1
position: 113727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:112387-112550:-1:exon

position:112387:-1
position: 112387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112550:-1
position: 112550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:112038-112285:-1:exon

position:112038:-1
position: 112038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112285:-1
position: 112285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:111433-111634:-1:exon

position:111433:-1
position: 111433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111634:-1
position: 111634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:111007-111158:-1:exon

position:111007:-1
position: 111007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111158:-1
position: 111158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:110100-110286:-1:exon

position:110100:-1
position: 110100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110286:-1
position: 110286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:109552-109695:-1:exon

position:109552:-1
position: 109552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109695:-1
position: 109695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:108878-109066:-1:exon

position:108878:-1
position: 108878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109066:-1
position: 109066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:107883-108044:-1:exon

position:107883:-1
position: 107883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108044:-1
position: 108044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:107265-107404:-1:exon

position:107265:-1
position: 107265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107404:-1
position: 107404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:106767-106969:-1:exon

position:106767:-1
position: 106767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106969:-1
position: 106969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:106011-106182:-1:exon

position:106011:-1
position: 106011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106182:-1
position: 106182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:105670-105892:-1:exon

position:105670:-1
position: 105670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105892:-1
position: 105892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:104737-104986:-1:exon

position:104986:-1
position: 104986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VPS11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: VPS11
product: VPS11 core subunit of CORVET and HOPS complexes, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 ESTs, 4 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032709383.1
SIO_010081: VPS11
subclass of: SO_0000673
so part of: VPS11
location: complement(join(104737..104986,105670..105892,106011..106182,106767..106969,107265..107404,107883..108044,108878..109066,109552..109695,110100..110286,111007..111158,111433..111634,112038..112285,112387..112550,113592..113727,113917..114065,114348..114516))
location: region:104737-114516:-1
so has part: feature:114348-114516:-1:exon
so has part: feature:113917-114065:-1:exon
so has part: feature:113592-113727:-1:exon
so has part: feature:112387-112550:-1:exon
so has part: feature:112038-112285:-1:exon
so has part: feature:111433-111634:-1:exon
so has part: feature:111007-111158:-1:exon
so has part: feature:110100-110286:-1:exon
so has part: feature:109552-109695:-1:exon
so has part: feature:108878-109066:-1:exon
so has part: feature:107883-108044:-1:exon
so has part: feature:107265-107404:-1:exon
so has part: feature:106767-106969:-1:exon
so has part: feature:106011-106182:-1:exon
so has part: feature:105670-105892:-1:exon
so has part: feature:104737-104986:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:114348-114516:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:113917-114065:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:113592-113727:-1:exon

position:113592:-1
position: 113592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:112387-112550:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:112038-112285:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:111433-111634:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:111007-111158:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:110100-110286:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109552-109695:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:108878-109066:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:107883-108044:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:107265-107404:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:106767-106969:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:106011-106182:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:105670-105892:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:104737-104986:-1:exon

VPS11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: VPS11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 11 homolog isoform X2
translation: MAAYLQWRRFVFFDRETVKEPPGPDGAGAKPFALPPGIAVCDSGRGSLVFGDMEGQIWFLPRSLQLSSFQAYKLRVTHLYQLKQHSILVSVGEDEEGINPLVKVWNLEKRDGGNPLCTRIFPAIPGFADGSVVLTKGDITRDRHSKTQILHEGSYPVTGLAFRQSGKTTHLFVVTTENIQSYMLSVKDYPHLELDTHGCGLRCSSLSDPSQDLQFIVAGNECVYLYQPDERGPCFAFEGQKLIVHWYRGYLIIVSKDRKTSPKSEFAGNEAQNSDKQVLNIYDLCNKFIAYSSVFDDIVDVLAEWGSLYVLTRDGKIHVLQEKDTQTKLEMLFRKNLFEMAINLAKSHHLDSDGLSEIFRQYGDHLYNKGNHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHNLTAYLQTLHLQSLANADHTTLLLNCYTKLKDSSKLEEFIKTSDSEVRFDVETAIKVLRQAGYYSHAVYLAEKHEHHEWYLKIQLEDIKNYQEALHYIGKLPFEQAESNMKRYGKILMHHVPNETTELLKILCTDYRPSGDSEGHGMLEGKKANSEEFIPVFANNSRELKAFLEHMTEVQADSPQGVYDTLLELRLQNWAHEQDEQIKEKLHDEALTLLKSGRFKTVFDKALVLCQMHNFKDGVLYLYEQGKLFQQIMHYHMQNEQYKKVIEVCELYGDQEACLWEQALGYFARKEEDCKEYVAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIKDYLVNKLQKQSRQIEQDEQRIQKYREETTRIRQEIEELKASPKIFQKTKCSICTSALELPSVHFLCGHSFHQHCFESYSESDSECPTCMPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDGFSVVADYFGRGVFNKLTLITDLPSGKAATTLEAGLQRELLIHTKRST
SIO_010081: VPS11
subclass of: SO_0000673
so part of: VPS11
location: complement(join(104822..104986,105670..105892,106011..106182,106767..106969,107265..107404,107883..108044,108878..109066,109552..109695,110100..110286,111007..111158,111433..111634,112038..112285,112387..112550,113655..113727,113917..114065,114348..114501))
location: region:104822-114501:-1
so has part: feature:114348-114501:-1:exon
so has part: feature:113917-114065:-1:exon
so has part: feature:113655-113727:-1:exon
so has part: feature:112387-112550:-1:exon
so has part: feature:112038-112285:-1:exon
so has part: feature:111433-111634:-1:exon
so has part: feature:111007-111158:-1:exon
so has part: feature:110100-110286:-1:exon
so has part: feature:109552-109695:-1:exon
so has part: feature:108878-109066:-1:exon
so has part: feature:107883-108044:-1:exon
so has part: feature:107265-107404:-1:exon
so has part: feature:106767-106969:-1:exon
so has part: feature:106011-106182:-1:exon
so has part: feature:105670-105892:-1:exon
so has part: feature:104822-104986:-1:exon

XP_032565275.1
type: Protein
SIO_000068: ncbiprotein

position:104822:-1
position: 104822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114501:-1
position: 114501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114348-114501:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:113917-114065:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:113655-113727:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:112387-112550:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:112038-112285:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:111433-111634:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:111007-111158:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:110100-110286:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109552-109695:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:108878-109066:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:107883-108044:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:107265-107404:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:106767-106969:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:106011-106182:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:105670-105892:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:104822-104986:-1:exon

VPS11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: VPS11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 11 homolog isoform X1
translation: MAAYLQWRRFVFFDRETVKEPPGPDGAGAKPFALPPGIAVCDSGRGSLVFGDMEGQIWFLPRSLQLSSFQAYKLRVTHLYQLKQHSILVSVGEDEEGINPLVKVWNLEKRDGGNPLCTRIFPAIPGNKPTVVSCLTVHENLNFMAIGFADGSVVLTKGDITRDRHSKTQILHEGSYPVTGLAFRQSGKTTHLFVVTTENIQSYMLSVKDYPHLELDTHGCGLRCSSLSDPSQDLQFIVAGNECVYLYQPDERGPCFAFEGQKLIVHWYRGYLIIVSKDRKTSPKSEFAGNEAQNSDKQVLNIYDLCNKFIAYSSVFDDIVDVLAEWGSLYVLTRDGKIHVLQEKDTQTKLEMLFRKNLFEMAINLAKSHHLDSDGLSEIFRQYGDHLYNKGNHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHNLTAYLQTLHLQSLANADHTTLLLNCYTKLKDSSKLEEFIKTSDSEVRFDVETAIKVLRQAGYYSHAVYLAEKHEHHEWYLKIQLEDIKNYQEALHYIGKLPFEQAESNMKRYGKILMHHVPNETTELLKILCTDYRPSGDSEGHGMLEGKKANSEEFIPVFANNSRELKAFLEHMTEVQADSPQGVYDTLLELRLQNWAHEQDEQIKEKLHDEALTLLKSGRFKTVFDKALVLCQMHNFKDGVLYLYEQGKLFQQIMHYHMQNEQYKKVIEVCELYGDQEACLWEQALGYFARKEEDCKEYVAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIKDYLVNKLQKQSRQIEQDEQRIQKYREETTRIRQEIEELKASPKIFQKTKCSICTSALELPSVHFLCGHSFHQHCFESYSESDSECPTCMPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDGFSVVADYFGRGVFNKLTLITDLPSGKAATTLEAGLQRELLIHTKRST
SIO_010081: VPS11
subclass of: SO_0000673
so part of: VPS11
location: complement(join(104822..104986,105670..105892,106011..106182,106767..106969,107265..107404,107883..108044,108878..109066,109552..109695,110100..110286,111007..111158,111433..111634,112038..112285,112387..112550,113592..113727,113917..114065,114348..114501))
location: region:104822-114501:-1
so has part: feature:114348-114501:-1:exon
so has part: feature:113917-114065:-1:exon
so has part: feature:113592-113727:-1:exon
so has part: feature:112387-112550:-1:exon
so has part: feature:112038-112285:-1:exon
so has part: feature:111433-111634:-1:exon
so has part: feature:111007-111158:-1:exon
so has part: feature:110100-110286:-1:exon
so has part: feature:109552-109695:-1:exon
so has part: feature:108878-109066:-1:exon
so has part: feature:107883-108044:-1:exon
so has part: feature:107265-107404:-1:exon
so has part: feature:106767-106969:-1:exon
so has part: feature:106011-106182:-1:exon
so has part: feature:105670-105892:-1:exon
so has part: feature:104822-104986:-1:exon

XP_032565274.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114348-114501:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:113917-114065:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:113592-113727:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:112387-112550:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:112038-112285:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:111433-111634:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:111007-111158:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:110100-110286:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109552-109695:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:108878-109066:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:107883-108044:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:107265-107404:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:106767-106969:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:106011-106182:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:105670-105892:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:104822-104986:-1:exon

DDX6
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: DDX6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(116030..133841)
location: region:116030-133841:-1
so has part: feature:116030-133841:-1:exon
subclass of: SO_0000010

116797659
type: Gene
SIO_000068: ncbigene

position:116030:-1
position: 116030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133841:-1
position: 133841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116030-133841:-1:exon

DDX6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: DDX6
product: DEAD-box helicase 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 13 ESTs, 6 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_032709385.1
SIO_010081: DDX6
subclass of: SO_0000673
so part of: DDX6
location: complement(join(116030..120295,121644..121823,122583..122684,123585..123648,125195..125311,125639..125767,126232..126354,126889..126983,127218..127364,127844..127973,129249..129353,129807..129870,131277..131734,133695..133840))
location: region:116030-133840:-1
so has part: feature:133695-133840:-1:exon
so has part: feature:131277-131734:-1:exon
so has part: feature:129807-129870:-1:exon
so has part: feature:129249-129353:-1:exon
so has part: feature:127844-127973:-1:exon
so has part: feature:127218-127364:-1:exon
so has part: feature:126889-126983:-1:exon
so has part: feature:126232-126354:-1:exon
so has part: feature:125639-125767:-1:exon
so has part: feature:125195-125311:-1:exon
so has part: feature:123585-123648:-1:exon
so has part: feature:122583-122684:-1:exon
so has part: feature:121644-121823:-1:exon
so has part: feature:116030-120295:-1:exon

position:133840:-1
position: 133840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133695-133840:-1:exon

position:133695:-1
position: 133695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:131277-131734:-1:exon

position:131277:-1
position: 131277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131734:-1
position: 131734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:129807-129870:-1:exon

position:129807:-1
position: 129807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129870:-1
position: 129870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:129249-129353:-1:exon

position:129249:-1
position: 129249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129353:-1
position: 129353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:127844-127973:-1:exon

position:127844:-1
position: 127844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127973:-1
position: 127973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:127218-127364:-1:exon

position:127218:-1
position: 127218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127364:-1
position: 127364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:126889-126983:-1:exon

position:126889:-1
position: 126889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126983:-1
position: 126983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:126232-126354:-1:exon

position:126232:-1
position: 126232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126354:-1
position: 126354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:125639-125767:-1:exon

position:125639:-1
position: 125639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125767:-1
position: 125767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:125195-125311:-1:exon

position:125195:-1
position: 125195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125311:-1
position: 125311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:123585-123648:-1:exon

position:123585:-1
position: 123585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123648:-1
position: 123648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:122583-122684:-1:exon

position:122583:-1
position: 122583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122684:-1
position: 122684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:121644-121823:-1:exon

position:121644:-1
position: 121644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121823:-1
position: 121823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:116030-120295:-1:exon

position:120295:-1
position: 120295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DDX6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: DDX6
product: DEAD-box helicase 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 10 ESTs, 6 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_032709386.1
SIO_010081: DDX6
subclass of: SO_0000673
so part of: DDX6
location: complement(join(116030..120295,121636..121823,122583..122684,123585..123648,125195..125311,125639..125767,126232..126354,126889..126983,127218..127364,127844..127973,129249..129353,129807..129870,131277..131734,133695..133840))
location: region:116030-133840:-1
so has part: feature:133695-133840:-1:exon
so has part: feature:131277-131734:-1:exon
so has part: feature:129807-129870:-1:exon
so has part: feature:129249-129353:-1:exon
so has part: feature:127844-127973:-1:exon
so has part: feature:127218-127364:-1:exon
so has part: feature:126889-126983:-1:exon
so has part: feature:126232-126354:-1:exon
so has part: feature:125639-125767:-1:exon
so has part: feature:125195-125311:-1:exon
so has part: feature:123585-123648:-1:exon
so has part: feature:122583-122684:-1:exon
so has part: feature:121636-121823:-1:exon
so has part: feature:116030-120295:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:133695-133840:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131277-131734:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:129807-129870:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:129249-129353:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127844-127973:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:127218-127364:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:126889-126983:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:126232-126354:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:125639-125767:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:125195-125311:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:123585-123648:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:122583-122684:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:121636-121823:-1:exon

position:121636:-1
position: 121636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:116030-120295:-1:exon

DDX6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: DDX6
product: DEAD-box helicase 6, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 9 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032709388.1
SIO_010081: DDX6
subclass of: SO_0000673
so part of: DDX6
location: complement(join(120451..121314,121644..121823,122583..122684,123585..123648,125195..125311,125639..125767,126232..126354,126889..126983,127218..127364,127844..127973,129249..129353,129807..129870,131277..131734,133695..133841))
location: region:120451-133841:-1
so has part: feature:133695-133841:-1:exon
so has part: feature:131277-131734:-1:exon
so has part: feature:129807-129870:-1:exon
so has part: feature:129249-129353:-1:exon
so has part: feature:127844-127973:-1:exon
so has part: feature:127218-127364:-1:exon
so has part: feature:126889-126983:-1:exon
so has part: feature:126232-126354:-1:exon
so has part: feature:125639-125767:-1:exon
so has part: feature:125195-125311:-1:exon
so has part: feature:123585-123648:-1:exon
so has part: feature:122583-122684:-1:exon
so has part: feature:121644-121823:-1:exon
so has part: feature:120451-121314:-1:exon

position:120451:-1
position: 120451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133695-133841:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131277-131734:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:129807-129870:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:129249-129353:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127844-127973:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:127218-127364:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:126889-126983:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:126232-126354:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:125639-125767:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:125195-125311:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:123585-123648:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:122583-122684:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:121644-121823:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:120451-121314:-1:exon

position:121314:-1
position: 121314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DDX6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: DDX6
product: DEAD-box helicase 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 9 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032709387.1
SIO_010081: DDX6
subclass of: SO_0000673
so part of: DDX6
location: complement(join(120451..121314,121636..121823,122583..122684,123585..123648,125195..125311,125639..125767,126232..126354,126889..126983,127218..127364,127844..127973,129249..129353,129807..129870,131277..131734,133695..133841))
location: region:120451-133841:-1
so has part: feature:133695-133841:-1:exon
so has part: feature:131277-131734:-1:exon
so has part: feature:129807-129870:-1:exon
so has part: feature:129249-129353:-1:exon
so has part: feature:127844-127973:-1:exon
so has part: feature:127218-127364:-1:exon
so has part: feature:126889-126983:-1:exon
so has part: feature:126232-126354:-1:exon
so has part: feature:125639-125767:-1:exon
so has part: feature:125195-125311:-1:exon
so has part: feature:123585-123648:-1:exon
so has part: feature:122583-122684:-1:exon
so has part: feature:121636-121823:-1:exon
so has part: feature:120451-121314:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:133695-133841:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131277-131734:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:129807-129870:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:129249-129353:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127844-127973:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:127218-127364:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:126889-126983:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:126232-126354:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:125639-125767:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:125195-125311:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:123585-123648:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:122583-122684:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:121636-121823:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:120451-121314:-1:exon

DDX6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: DDX6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent RNA helicase DDX6
translation: MSTARTENPVIMGLSSQNGQLRGPVKPSGGPGGGGTQTQQQMNQLKNANTINNGTQQQAQSMTTAIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVEHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVEDEKQ
SIO_010081: DDX6
subclass of: SO_0000673
so part of: DDX6
location: complement(join(121648..121823,122583..122684,123585..123648,125195..125311,125639..125767,126232..126354,126889..126983,127218..127364,127844..127973,129249..129353,129807..129870,131277..131476))
location: region:121648-131476:-1
so has part: feature:131277-131476:-1:exon
so has part: feature:129807-129870:-1:exon
so has part: feature:129249-129353:-1:exon
so has part: feature:127844-127973:-1:exon
so has part: feature:127218-127364:-1:exon
so has part: feature:126889-126983:-1:exon
so has part: feature:126232-126354:-1:exon
so has part: feature:125639-125767:-1:exon
so has part: feature:125195-125311:-1:exon
so has part: feature:123585-123648:-1:exon
so has part: feature:122583-122684:-1:exon
so has part: feature:121648-121823:-1:exon

XP_032565276.1
type: Protein
SIO_000068: ncbiprotein

position:121648:-1
position: 121648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131476:-1
position: 131476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131277-131476:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:129807-129870:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:129249-129353:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:127844-127973:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127218-127364:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:126889-126983:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:126232-126354:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:125639-125767:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:125195-125311:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:123585-123648:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:122583-122684:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:121648-121823:-1:exon

DDX6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: DDX6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent RNA helicase DDX6
translation: MSTARTENPVIMGLSSQNGQLRGPVKPSGGPGGGGTQTQQQMNQLKNANTINNGTQQQAQSMTTAIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVEHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVEDEKQ
SIO_010081: DDX6
subclass of: SO_0000673
so part of: DDX6
location: complement(join(121648..121823,122583..122684,123585..123648,125195..125311,125639..125767,126232..126354,126889..126983,127218..127364,127844..127973,129249..129353,129807..129870,131277..131476))
location: region:121648-131476:-1
so has part: feature:131277-131476:-1:exon
so has part: feature:129807-129870:-1:exon
so has part: feature:129249-129353:-1:exon
so has part: feature:127844-127973:-1:exon
so has part: feature:127218-127364:-1:exon
so has part: feature:126889-126983:-1:exon
so has part: feature:126232-126354:-1:exon
so has part: feature:125639-125767:-1:exon
so has part: feature:125195-125311:-1:exon
so has part: feature:123585-123648:-1:exon
so has part: feature:122583-122684:-1:exon
so has part: feature:121648-121823:-1:exon

XP_032565277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131277-131476:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:129807-129870:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:129249-129353:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:127844-127973:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127218-127364:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:126889-126983:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:126232-126354:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:125639-125767:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:125195-125311:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:123585-123648:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:122583-122684:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:121648-121823:-1:exon

DDX6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: DDX6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent RNA helicase DDX6
translation: MSTARTENPVIMGLSSQNGQLRGPVKPSGGPGGGGTQTQQQMNQLKNANTINNGTQQQAQSMTTAIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVEHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVEDEKQ
SIO_010081: DDX6
subclass of: SO_0000673
so part of: DDX6
location: complement(join(121648..121823,122583..122684,123585..123648,125195..125311,125639..125767,126232..126354,126889..126983,127218..127364,127844..127973,129249..129353,129807..129870,131277..131476))
location: region:121648-131476:-1
so has part: feature:131277-131476:-1:exon
so has part: feature:129807-129870:-1:exon
so has part: feature:129249-129353:-1:exon
so has part: feature:127844-127973:-1:exon
so has part: feature:127218-127364:-1:exon
so has part: feature:126889-126983:-1:exon
so has part: feature:126232-126354:-1:exon
so has part: feature:125639-125767:-1:exon
so has part: feature:125195-125311:-1:exon
so has part: feature:123585-123648:-1:exon
so has part: feature:122583-122684:-1:exon
so has part: feature:121648-121823:-1:exon

XP_032565278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131277-131476:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:129807-129870:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:129249-129353:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:127844-127973:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127218-127364:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:126889-126983:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:126232-126354:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:125639-125767:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:125195-125311:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:123585-123648:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:122583-122684:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:121648-121823:-1:exon

DDX6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: DDX6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent RNA helicase DDX6
translation: MSTARTENPVIMGLSSQNGQLRGPVKPSGGPGGGGTQTQQQMNQLKNANTINNGTQQQAQSMTTAIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVEHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVEDEKQ
SIO_010081: DDX6
subclass of: SO_0000673
so part of: DDX6
location: complement(join(121648..121823,122583..122684,123585..123648,125195..125311,125639..125767,126232..126354,126889..126983,127218..127364,127844..127973,129249..129353,129807..129870,131277..131476))
location: region:121648-131476:-1
so has part: feature:131277-131476:-1:exon
so has part: feature:129807-129870:-1:exon
so has part: feature:129249-129353:-1:exon
so has part: feature:127844-127973:-1:exon
so has part: feature:127218-127364:-1:exon
so has part: feature:126889-126983:-1:exon
so has part: feature:126232-126354:-1:exon
so has part: feature:125639-125767:-1:exon
so has part: feature:125195-125311:-1:exon
so has part: feature:123585-123648:-1:exon
so has part: feature:122583-122684:-1:exon
so has part: feature:121648-121823:-1:exon

XP_032565279.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131277-131476:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:129807-129870:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:129249-129353:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:127844-127973:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127218-127364:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:126889-126983:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:126232-126354:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:125639-125767:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:125195-125311:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:123585-123648:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:122583-122684:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:121648-121823:-1:exon

CXCR5
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: CXCR5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 133894..144657
location: region:133894-144657:1
so has part: feature:133894-144657:1:exon
subclass of: SO_0000010

116797852
type: Gene
SIO_000068: ncbigene

position:133894:1
position: 133894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144657:1
position: 144657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133894-144657:1:exon

CXCR5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: CXCR5
product: C-X-C motif chemokine receptor 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032709723.1
SIO_010081: CXCR5
subclass of: SO_0000673
so part of: CXCR5
location: join(133894..133951,133985..134469,136355..137375,141922..144657)
location: region:133894-144657:1
so has part: feature:133894-133951:1:exon
so has part: feature:133985-134469:1:exon
so has part: feature:136355-137375:1:exon
so has part: feature:141922-144657:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:133894-133951:1:exon

position:133951:1
position: 133951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:133985-134469:1:exon

position:133985:1
position: 133985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134469:1
position: 134469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:136355-137375:1:exon

position:136355:1
position: 136355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137375:1
position: 137375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:141922-144657:1:exon

position:141922:1
position: 141922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CXCR5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: CXCR5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-X-C chemokine receptor type 5
translation: MLYPFLLKLLTPPQKRTSVETSVEETDPAPETMGPVSYSSETYDLSQVELSGYYEAENTTPSLEGYFCFNPASSVVGNQRDPFRKVFMPLIYLLMFMLGTVGNALVLVILERFKRSRTTTENFLFHLTLANLALLLTFPFSVVESLAGWVFGKFLCKILSAVHKINFYCSSMLLGCIAVDRYLAIVYAIHTYRKRRAHSIHLTCTAVWLCSLLLTLPDLIFMEVWTDDSNRSICYFPEVGIDGNNAWLATRFLYHTVGFFVPLLVMCYCYMAIVRVLCQSQRLQRQKAVRVAILVTGIFLLCWSPYHIVIFLNTLTKLEAFTKNCLLEDQLDTAIMVTEAIGFTHCCLNPILYAFIGVKFRNDFFRILQELGCISQETLQEILEVTRKGSGIDSDTTTSISTF
SIO_010081: CXCR5
subclass of: SO_0000673
so part of: CXCR5
location: join(137241..137375,141922..142998)
location: region:137241-142998:1
so has part: feature:137241-137375:1:exon
so has part: feature:141922-142998:1:exon

XP_032565614.1
type: Protein
SIO_000068: ncbiprotein

position:137241:1
position: 137241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142998:1
position: 142998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137241-137375:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:141922-142998:1:exon

BCL9L
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: BCL9L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(145892..210691)
location: region:145892-210691:-1
so has part: feature:145892-210691:-1:exon
subclass of: SO_0000010

116797708
type: Gene
SIO_000068: ncbigene

position:145892:-1
position: 145892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210691:-1
position: 210691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145892-210691:-1:exon

BCL9L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: BCL9L
product: BCL9 like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032709511.1
SIO_010081: BCL9L
subclass of: SO_0000673
so part of: BCL9L
location: complement(join(145892..150512,151790..151954,152483..154859,155247..155331,156085..156295,157451..157573,159198..159563,193595..193675))
location: region:145892-193675:-1
so has part: feature:193595-193675:-1:exon
so has part: feature:159198-159563:-1:exon
so has part: feature:157451-157573:-1:exon
so has part: feature:156085-156295:-1:exon
so has part: feature:155247-155331:-1:exon
so has part: feature:152483-154859:-1:exon
so has part: feature:151790-151954:-1:exon
so has part: feature:145892-150512:-1:exon

position:193675:-1
position: 193675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193595-193675:-1:exon

position:193595:-1
position: 193595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:159198-159563:-1:exon

position:159198:-1
position: 159198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159563:-1
position: 159563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:157451-157573:-1:exon

position:157451:-1
position: 157451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157573:-1
position: 157573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:156085-156295:-1:exon

position:156085:-1
position: 156085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156295:-1
position: 156295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:155247-155331:-1:exon

position:155247:-1
position: 155247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155331:-1
position: 155331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:152483-154859:-1:exon

position:152483:-1
position: 152483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154859:-1
position: 154859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:151790-151954:-1:exon

position:151790:-1
position: 151790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151954:-1
position: 151954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:145892-150512:-1:exon

position:150512:-1
position: 150512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BCL9L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: BCL9L
product: BCL9 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs, 3 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032709508.1
SIO_010081: BCL9L
subclass of: SO_0000673
so part of: BCL9L
location: complement(join(145892..150512,151790..152050,152483..154859,155247..155331,156085..156295,157451..157573,159198..159563,193595..193675))
location: region:145892-193675:-1
so has part: feature:193595-193675:-1:exon
so has part: feature:159198-159563:-1:exon
so has part: feature:157451-157573:-1:exon
so has part: feature:156085-156295:-1:exon
so has part: feature:155247-155331:-1:exon
so has part: feature:152483-154859:-1:exon
so has part: feature:151790-152050:-1:exon
so has part: feature:145892-150512:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:193595-193675:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:159198-159563:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:157451-157573:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:156085-156295:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:155247-155331:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:152483-154859:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:151790-152050:-1:exon

position:152050:-1
position: 152050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:145892-150512:-1:exon

BCL9L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: BCL9L
product: BCL9 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032709510.1
SIO_010081: BCL9L
subclass of: SO_0000673
so part of: BCL9L
location: complement(join(145917..150512,151790..152050,152483..154859,155247..155331,156085..156295,157451..157573,159198..159561,209727..209892,210566..210691))
location: region:145917-210691:-1
so has part: feature:210566-210691:-1:exon
so has part: feature:209727-209892:-1:exon
so has part: feature:159198-159561:-1:exon
so has part: feature:157451-157573:-1:exon
so has part: feature:156085-156295:-1:exon
so has part: feature:155247-155331:-1:exon
so has part: feature:152483-154859:-1:exon
so has part: feature:151790-152050:-1:exon
so has part: feature:145917-150512:-1:exon

position:145917:-1
position: 145917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210566-210691:-1:exon

position:210566:-1
position: 210566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:209727-209892:-1:exon

position:209727:-1
position: 209727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209892:-1
position: 209892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:159198-159561:-1:exon

position:159561:-1
position: 159561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:157451-157573:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:156085-156295:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:155247-155331:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:152483-154859:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:151790-152050:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:145917-150512:-1:exon

BCL9L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: BCL9L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: B-cell CLL/lymphoma 9-like protein isoform X2
translation: MHPDNKLPSHGKAGSSGALAQHHNVSQAPTCNLGSKGVGAGSHGSKATQISPGNSGLKNSQNTVPNFSSLKGKVKRERSISVDSGEQREVSTPSQDTESKGEVAPRSKRRCVLERKQPYSGDEWCSGPDSEEDDKPISNAHSCNVADPAMSTAPQLGPGSNPLPNLSESSASGVPHGAAPGLRSEAVGGGGSGAGKQPSQFVYVFTTHLANTAAEAVLQGRADSILVYHQQNVPRAKLDQAPAPKVLGVAEPLPINPPAANTPQSQPPAPQASQPQPQPPPPQPPPPTPQTISQTPLPAPQEGTSEDVRRDLTPSSLGNNSSSNQPGNNHPNTPTASASAMQPGQVDSSAASSSSLLGEGPGPGMPGQAGLGPRNAMNSEGLSKEQLEHRERSLQTLRDIERLLLRSGEAEPFLKSSQNVGEGGTAPQPQATPTQPPAPSASMKKYEEPLQSMISQTQSLGGPSLEHEVPHHPGADMGQQMNMMMQRLNQDSLTPEQVAWRKLQEEYYEEKRRKEEQISIHGRPMQEIMIPQSMGSMMMRGPPPPYHSKPGEPWPPGMGSQLRGPIDVQDPMQLRGGPPFPGPRFPGNQMQRVSGFGGMQNMPLDALGPMNAMQRPVRPGMGWSDDMSPMGGPGNFPQGTLPYPSGQGDPERFMNPRAREEILRHQLMEKRPVAMQRPMGISGNSMSQSMEMERMMQAHRQMDPSMFAGQITGESLSSAPMGMDFAGTRGMLSPPMSQSGLRDMDAPVGPGNLNMNMNVNMNMNMNLNVQMTPQQQMMMSQKMRGPEMMAHQGMSPEELARARAQNGSGSAMLTGPQKMMIPSQFPNQGQQGFSSGQGPYPSMPQEMGSGSDIFNPEQGTMPVGSISGTTRLSHIPLPPASNPTPTPGGNLANMHPAPSRGLGRRPSDLTINISQMNSPSMGHLKSPTLSQVHSPLVTSPSANLKSPQTPSQMVSMPPSNQSGPLKSPQVMSSSLNVRSPTGSPSRLKSPSMAVPSPGWVPSPKATMPSPGVNQSKQTLSMNSSASMGALDQDPSPSQNPLSLMMSQMSKYAMPSSTPLYHNAIKTIATSDDELLPDRPMLPPGSMSGVTGNQPNQLHLNSVAPGSSQSPMGMNLPGQQPLSHEPPPTSMMSSPNPLGSNIPMHPSGPGAGVPPQNPMMMPPGPQDSLNQQCGPVPNSSQMIPSNQLVFPRMQQPHNAMPSPAGGMPIAPGAGGGPGMQQHYPPGMPLPPEDLPSQQPGQMPPQQHMMGKNIPPRIGEPYPPVLPGVASVLNDPELSEVIRPTPTGIPEFDLSRIIPSEKPSSTLQYFPKSDSQAPKSQPSNLHLMNLQNMMAEQPPVRPGMNAPSLPGQQGVQRGLSMPMCHPGQMPMLGRTGIPPQQGMMGNSMHQGMMSPQQSLMAQQNFMLMQAKQRSMSVSGEMYAQTGHMMSPQGSLMGPPPQQNLMVTHQMRQRSVSLDSQMSYIPGPGNMANLPF
SIO_010081: BCL9L
subclass of: SO_0000673
so part of: BCL9L
location: complement(join(149353..150512,151790..151954,152483..154859,155247..155331,156085..156295,157451..157573,159198..159498))
location: region:149353-159498:-1
so has part: feature:159198-159498:-1:exon
so has part: feature:157451-157573:-1:exon
so has part: feature:156085-156295:-1:exon
so has part: feature:155247-155331:-1:exon
so has part: feature:152483-154859:-1:exon
so has part: feature:151790-151954:-1:exon
so has part: feature:149353-150512:-1:exon

XP_032565402.1
type: Protein
SIO_000068: ncbiprotein

position:149353:-1
position: 149353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159498:-1
position: 159498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159198-159498:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:157451-157573:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:156085-156295:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:155247-155331:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:152483-154859:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:151790-151954:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:149353-150512:-1:exon

BCL9L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: BCL9L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: B-cell CLL/lymphoma 9-like protein isoform X1
translation: MHPDNKLPSHGKAGSSGALAQHHNVSQAPTCNLGSKGVGAGSHGSKATQISPGNSGLKNSQNTVPNFSSLKGKVKRERSISVDSGEQREVSTPSQDTESKGEVAPRSKRRCVLERKQPYSGDEWCSGPDSEEDDKPISNAHSCNVADPAMSTAPQLGPGSNPLPNLSESSASGVPHGAAPGLRSEAVGGGGSGAGKQPSQFVYVFTTHLANTAAEAVLQGRADSILVYHQQNVPRAKLDQAPAPKVLGVAEPLPINPPAANTPQSQPPAPQASQPQPQPPPPQPPPPTPQTISQTPLPAPQEGTSEDVRRDLTPSSLGNNSSSNQPGNNHPNTPTASASAMQPGQVDSSAASSSSLLGEGPGPGMPGQAGLGPRNAMNSEGLSKEQLEHRERSLQTLRDIERLLLRSGEAEPFLKSSQNVGEGGTAPQPQATPTQPPAPSASMKKYEEPLQSMISQTQSLGGPSLEHEVPHHPGADMGQQMNMMMQRLNQDSLTPEQVAWRKLQEEYYEEKRRKEEQISIHGRPMQEIMIPQSMGSMMMRGPPPPYHSKPGEPWPPGMGSQLRGPIDVQDPMQLRGGPPFPGPRFPGNQMQRVSGFGGMQNMPLDALGPMNAMQRPVRPGMGWSDDMSPMGGPGNFPQGTLPYPSGQGDPERFMNPRAREEILRHQLMEKRPVAMQRPMGISGNSMSQSMEMERMMQAHRQMDPSMFAGQITGESLSSAPMGMDFAGTRGMLSPPMSQSGLRDMDAPVGPGNLNMNMNVNMNMNMNLNVQMTPQQQMMMSQKMRGPEMMAHQGMSPEELARARAQNGSGSAMLTGPQKMMIPSQFPNQGQQGFSSGQGPYPSMPQEMGSGSDIFNPEQGTMPVGSISGTTRLSHIPLPPASNPTPTPGGNLANMHPAPSRGLGRRPSDLTINISQMNSPSMGHLKSPTLSQVHSPLVTSPSANLKSPQTPSQMVSMPPSNQSGPLKSPQVMSSSLNVRSPTGSPSRLKSPSMAVPSPGWVPSPKATMPSPGVNQSKQTLSMNSSASMGALDQGSLPSGPRSSSSAPASNTSSTINPNMPFTSSPDPSPSQNPLSLMMSQMSKYAMPSSTPLYHNAIKTIATSDDELLPDRPMLPPGSMSGVTGNQPNQLHLNSVAPGSSQSPMGMNLPGQQPLSHEPPPTSMMSSPNPLGSNIPMHPSGPGAGVPPQNPMMMPPGPQDSLNQQCGPVPNSSQMIPSNQLVFPRMQQPHNAMPSPAGGMPIAPGAGGGPGMQQHYPPGMPLPPEDLPSQQPGQMPPQQHMMGKNIPPRIGEPYPPVLPGVASVLNDPELSEVIRPTPTGIPEFDLSRIIPSEKPSSTLQYFPKSDSQAPKSQPSNLHLMNLQNMMAEQPPVRPGMNAPSLPGQQGVQRGLSMPMCHPGQMPMLGRTGIPPQQGMMGNSMHQGMMSPQQSLMAQQNFMLMQAKQRSMSVSGEMYAQTGHMMSPQGSLMGPPPQQNLMVTHQMRQRSVSLDSQMSYIPGPGNMANLPF
SIO_010081: BCL9L
subclass of: SO_0000673
so part of: BCL9L
location: complement(join(149353..150512,151790..152050,152483..154859,155247..155331,156085..156295,157451..157573,159198..159498))
location: region:149353-159498:-1
so has part: feature:159198-159498:-1:exon
so has part: feature:157451-157573:-1:exon
so has part: feature:156085-156295:-1:exon
so has part: feature:155247-155331:-1:exon
so has part: feature:152483-154859:-1:exon
so has part: feature:151790-152050:-1:exon
so has part: feature:149353-150512:-1:exon

XP_032565399.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:159198-159498:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:157451-157573:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:156085-156295:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:155247-155331:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:152483-154859:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:151790-152050:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:149353-150512:-1:exon

BCL9L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: BCL9L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: B-cell CLL/lymphoma 9-like protein isoform X1
translation: MHPDNKLPSHGKAGSSGALAQHHNVSQAPTCNLGSKGVGAGSHGSKATQISPGNSGLKNSQNTVPNFSSLKGKVKRERSISVDSGEQREVSTPSQDTESKGEVAPRSKRRCVLERKQPYSGDEWCSGPDSEEDDKPISNAHSCNVADPAMSTAPQLGPGSNPLPNLSESSASGVPHGAAPGLRSEAVGGGGSGAGKQPSQFVYVFTTHLANTAAEAVLQGRADSILVYHQQNVPRAKLDQAPAPKVLGVAEPLPINPPAANTPQSQPPAPQASQPQPQPPPPQPPPPTPQTISQTPLPAPQEGTSEDVRRDLTPSSLGNNSSSNQPGNNHPNTPTASASAMQPGQVDSSAASSSSLLGEGPGPGMPGQAGLGPRNAMNSEGLSKEQLEHRERSLQTLRDIERLLLRSGEAEPFLKSSQNVGEGGTAPQPQATPTQPPAPSASMKKYEEPLQSMISQTQSLGGPSLEHEVPHHPGADMGQQMNMMMQRLNQDSLTPEQVAWRKLQEEYYEEKRRKEEQISIHGRPMQEIMIPQSMGSMMMRGPPPPYHSKPGEPWPPGMGSQLRGPIDVQDPMQLRGGPPFPGPRFPGNQMQRVSGFGGMQNMPLDALGPMNAMQRPVRPGMGWSDDMSPMGGPGNFPQGTLPYPSGQGDPERFMNPRAREEILRHQLMEKRPVAMQRPMGISGNSMSQSMEMERMMQAHRQMDPSMFAGQITGESLSSAPMGMDFAGTRGMLSPPMSQSGLRDMDAPVGPGNLNMNMNVNMNMNMNLNVQMTPQQQMMMSQKMRGPEMMAHQGMSPEELARARAQNGSGSAMLTGPQKMMIPSQFPNQGQQGFSSGQGPYPSMPQEMGSGSDIFNPEQGTMPVGSISGTTRLSHIPLPPASNPTPTPGGNLANMHPAPSRGLGRRPSDLTINISQMNSPSMGHLKSPTLSQVHSPLVTSPSANLKSPQTPSQMVSMPPSNQSGPLKSPQVMSSSLNVRSPTGSPSRLKSPSMAVPSPGWVPSPKATMPSPGVNQSKQTLSMNSSASMGALDQGSLPSGPRSSSSAPASNTSSTINPNMPFTSSPDPSPSQNPLSLMMSQMSKYAMPSSTPLYHNAIKTIATSDDELLPDRPMLPPGSMSGVTGNQPNQLHLNSVAPGSSQSPMGMNLPGQQPLSHEPPPTSMMSSPNPLGSNIPMHPSGPGAGVPPQNPMMMPPGPQDSLNQQCGPVPNSSQMIPSNQLVFPRMQQPHNAMPSPAGGMPIAPGAGGGPGMQQHYPPGMPLPPEDLPSQQPGQMPPQQHMMGKNIPPRIGEPYPPVLPGVASVLNDPELSEVIRPTPTGIPEFDLSRIIPSEKPSSTLQYFPKSDSQAPKSQPSNLHLMNLQNMMAEQPPVRPGMNAPSLPGQQGVQRGLSMPMCHPGQMPMLGRTGIPPQQGMMGNSMHQGMMSPQQSLMAQQNFMLMQAKQRSMSVSGEMYAQTGHMMSPQGSLMGPPPQQNLMVTHQMRQRSVSLDSQMSYIPGPGNMANLPF
SIO_010081: BCL9L
subclass of: SO_0000673
so part of: BCL9L
location: complement(join(149353..150512,151790..152050,152483..154859,155247..155331,156085..156295,157451..157573,159198..159498))
location: region:149353-159498:-1
so has part: feature:159198-159498:-1:exon
so has part: feature:157451-157573:-1:exon
so has part: feature:156085-156295:-1:exon
so has part: feature:155247-155331:-1:exon
so has part: feature:152483-154859:-1:exon
so has part: feature:151790-152050:-1:exon
so has part: feature:149353-150512:-1:exon

XP_032565401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:159198-159498:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:157451-157573:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:156085-156295:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:155247-155331:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:152483-154859:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:151790-152050:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:149353-150512:-1:exon

CCDC84
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: CCDC84
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 212596..215597
location: region:212596-215597:1
so has part: feature:212596-215597:1:exon
subclass of: SO_0000010

116797827
type: Gene
SIO_000068: ncbigene

position:212596:1
position: 212596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215597:1
position: 215597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212596-215597:1:exon

CCDC84
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: CCDC84
product: coiled-coil domain containing 84
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032709680.1
SIO_010081: CCDC84
subclass of: SO_0000673
so part of: CCDC84
location: join(212596..212885,212975..213140,213222..213284,213448..213512,213670..213775,214112..214142,214533..214616,214822..214954,215434..215597)
location: region:212596-215597:1
so has part: feature:212596-212885:1:exon
so has part: feature:212975-213140:1:exon
so has part: feature:213222-213284:1:exon
so has part: feature:213448-213512:1:exon
so has part: feature:213670-213775:1:exon
so has part: feature:214112-214142:1:exon
so has part: feature:214533-214616:1:exon
so has part: feature:214822-214954:1:exon
so has part: feature:215434-215597:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:212596-212885:1:exon

position:212885:1
position: 212885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:212975-213140:1:exon

position:212975:1
position: 212975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213140:1
position: 213140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:213222-213284:1:exon

position:213222:1
position: 213222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213284:1
position: 213284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:213448-213512:1:exon

position:213448:1
position: 213448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213512:1
position: 213512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:213670-213775:1:exon

position:213670:1
position: 213670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213775:1
position: 213775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:214112-214142:1:exon

position:214112:1
position: 214112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214142:1
position: 214142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:214533-214616:1:exon

position:214533:1
position: 214533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214616:1
position: 214616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:214822-214954:1:exon

position:214822:1
position: 214822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214954:1
position: 214954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:215434-215597:1:exon

position:215434:1
position: 215434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CCDC84
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: CCDC84
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 84
translation: MAVHYCGLCRRTAFTGRRHRYSAGHRHRLQDALVRLQEAAAAARAAAADVGSAVRPYDPAEHDGRVWCPCCGRGVRRDGRRGGLALPQAGLLRHLAGSEHRRETARFWRENRAEAALRERCLVPTEEYEQFARALERALAEHQRREEERIRQMAADIREAERRQRETVQAALQLQTEAERCAGPSVCSPPAGPERDTSHDAEQPGLSGMQTGPDLSWMEAGQALTFIGHQETEGKGNVHTGAKPPWLTEEEDGTKQEIGPSYEEFLRQKEKQKLKKLPAERVGANFDHTSQTSDSWLPSFGRVWNHGRRWQSRHQFRTESGEKKKR
SIO_010081: CCDC84
subclass of: SO_0000673
so part of: CCDC84
location: join(212596..212885,212975..213140,213222..213284,213448..213512,213670..213775,214112..214142,214533..214616,214822..214954,215434..215476)
location: region:212596-215476:1
so has part: feature:212596-212885:1:exon
so has part: feature:212975-213140:1:exon
so has part: feature:213222-213284:1:exon
so has part: feature:213448-213512:1:exon
so has part: feature:213670-213775:1:exon
so has part: feature:214112-214142:1:exon
so has part: feature:214533-214616:1:exon
so has part: feature:214822-214954:1:exon
so has part: feature:215434-215476:1:exon

XP_032565571.1
type: Protein
SIO_000068: ncbiprotein

position:215476:1
position: 215476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212596-212885:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212975-213140:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:213222-213284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:213448-213512:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:213670-213775:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:214112-214142:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:214533-214616:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:214822-214954:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:215434-215476:1:exon

RPS25
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: RPS25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(216032..217968)
location: region:216032-217968:-1
so has part: feature:216032-217968:-1:exon
subclass of: SO_0000010

116797829
type: Gene
SIO_000068: ncbigene

position:216032:-1
position: 216032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217968:-1
position: 217968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216032-217968:-1:exon

RPS25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: RPS25
product: ribosomal protein S25
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 15 ESTs, 6 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_032709682.1
SIO_010081: RPS25
subclass of: SO_0000673
so part of: RPS25
location: complement(join(216032..216110,216522..216620,217017..217200,217597..217692,217851..217968))
location: region:216032-217968:-1
so has part: feature:217851-217968:-1:exon
so has part: feature:217597-217692:-1:exon
so has part: feature:217017-217200:-1:exon
so has part: feature:216522-216620:-1:exon
so has part: feature:216032-216110:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:217851-217968:-1:exon

position:217851:-1
position: 217851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:217597-217692:-1:exon

position:217597:-1
position: 217597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217692:-1
position: 217692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:217017-217200:-1:exon

position:217017:-1
position: 217017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217200:-1
position: 217200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:216522-216620:-1:exon

position:216522:-1
position: 216522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216620:-1
position: 216620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:216032-216110:-1:exon

position:216110:-1
position: 216110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPS25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: RPS25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S25
translation: MPPKDDKKKKDAGKSAKKDKDPVNKSGGKAKKKKWSKGKVRDKLNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNTKGGDAPAAGEDA
SIO_010081: RPS25
subclass of: SO_0000673
so part of: RPS25
location: complement(join(216526..216620,217017..217200,217597..217692,217851..217853))
location: region:216526-217853:-1
so has part: feature:217851-217853:-1:exon
so has part: feature:217597-217692:-1:exon
so has part: feature:217017-217200:-1:exon
so has part: feature:216526-216620:-1:exon

XP_032565573.1
type: Protein
SIO_000068: ncbiprotein

position:216526:-1
position: 216526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217853:-1
position: 217853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217851-217853:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:217597-217692:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217017-217200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:216526-216620:-1:exon

TRAPPC4
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: TRAPPC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 217932..219760
location: region:217932-219760:1
so has part: feature:217932-219760:1:exon
subclass of: SO_0000010

116797828
type: Gene
SIO_000068: ncbigene

position:217932:1
position: 217932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219760:1
position: 219760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217932-219760:1:exon

TRAPPC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: TRAPPC4
product: trafficking protein particle complex 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 4 ESTs, 4 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_032709681.1
SIO_010081: TRAPPC4
subclass of: SO_0000673
so part of: TRAPPC4
location: join(217932..218162,218272..218446,218527..218630,218725..218851,219279..219760)
location: region:217932-219760:1
so has part: feature:217932-218162:1:exon
so has part: feature:218272-218446:1:exon
so has part: feature:218527-218630:1:exon
so has part: feature:218725-218851:1:exon
so has part: feature:219279-219760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:217932-218162:1:exon

position:218162:1
position: 218162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:218272-218446:1:exon

position:218272:1
position: 218272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218446:1
position: 218446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:218527-218630:1:exon

position:218527:1
position: 218527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218630:1
position: 218630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:218725-218851:1:exon

position:218725:1
position: 218725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218851:1
position: 218851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:219279-219760:1:exon

position:219279:1
position: 219279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRAPPC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: TRAPPC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trafficking protein particle complex subunit 4
translation: MAIFSVYVVNKAGGLIYQLDHYAPRADTEKTFSFPLDLVLRPHDERVVVAFGQRDGIRVGHAVLAINGAEVNGRFTADGKDVLEFLGNPANYPVSIRFGRHRLSSNEKLMLASMFHSLFAIGSQLSPEVGSSGIEMLETDTFKLHCFQTLTGIKFMVLADPRQTGIDALLRKIYEIYSDFALKNPFYSLEMPIRCELFDQNLKLALEVAEKAGPFGPGS
SIO_010081: TRAPPC4
subclass of: SO_0000673
so part of: TRAPPC4
location: join(217988..218162,218272..218446,218527..218630,218725..218851,219279..219357)
location: region:217988-219357:1
so has part: feature:217988-218162:1:exon
so has part: feature:218272-218446:1:exon
so has part: feature:218527-218630:1:exon
so has part: feature:218725-218851:1:exon
so has part: feature:219279-219357:1:exon

XP_032565572.1
type: Protein
SIO_000068: ncbiprotein

position:217988:1
position: 217988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219357:1
position: 219357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217988-218162:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218272-218446:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218527-218630:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:218725-218851:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:219279-219357:1:exon

SLC37A4
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: SLC37A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(219869..227335)
location: region:219869-227335:-1
so has part: feature:219869-227335:-1:exon
subclass of: SO_0000010

116797825
type: Gene
SIO_000068: ncbigene

position:219869:-1
position: 219869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227335:-1
position: 227335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219869-227335:-1:exon

SLC37A4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SLC37A4
product: solute carrier family 37 member 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 20 long SRA reads, 18 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_032709679.1
SIO_010081: SLC37A4
subclass of: SO_0000673
so part of: SLC37A4
location: complement(join(219869..221356,221645..221783,223154..223267,223528..223613,223985..224143,225400..225643,226806..227038,227128..227335))
location: region:219869-227335:-1
so has part: feature:227128-227335:-1:exon
so has part: feature:226806-227038:-1:exon
so has part: feature:225400-225643:-1:exon
so has part: feature:223985-224143:-1:exon
so has part: feature:223528-223613:-1:exon
so has part: feature:223154-223267:-1:exon
so has part: feature:221645-221783:-1:exon
so has part: feature:219869-221356:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:227128-227335:-1:exon

position:227128:-1
position: 227128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:226806-227038:-1:exon

position:226806:-1
position: 226806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227038:-1
position: 227038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:225400-225643:-1:exon

position:225400:-1
position: 225400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225643:-1
position: 225643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:223985-224143:-1:exon

position:223985:-1
position: 223985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224143:-1
position: 224143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:223528-223613:-1:exon

position:223528:-1
position: 223528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223613:-1
position: 223613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:223154-223267:-1:exon

position:223154:-1
position: 223154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223267:-1
position: 223267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:221645-221783:-1:exon

position:221645:-1
position: 221645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221783:-1
position: 221783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:219869-221356:-1:exon

position:221356:-1
position: 221356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC37A4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SLC37A4
product: solute carrier family 37 member 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 8 long SRA reads, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_032709678.1
SIO_010081: SLC37A4
subclass of: SO_0000673
so part of: SLC37A4
location: complement(join(219869..221356,221645..221783,222826..222891,223154..223267,223528..223613,223985..224143,225400..225643,226806..227038,227128..227335))
location: region:219869-227335:-1
so has part: feature:227128-227335:-1:exon
so has part: feature:226806-227038:-1:exon
so has part: feature:225400-225643:-1:exon
so has part: feature:223985-224143:-1:exon
so has part: feature:223528-223613:-1:exon
so has part: feature:223154-223267:-1:exon
so has part: feature:222826-222891:-1:exon
so has part: feature:221645-221783:-1:exon
so has part: feature:219869-221356:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:227128-227335:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:226806-227038:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:225400-225643:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:223985-224143:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:223528-223613:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:223154-223267:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:222826-222891:-1:exon

position:222826:-1
position: 222826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222891:-1
position: 222891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:221645-221783:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:219869-221356:-1:exon

SLC37A4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SLC37A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphate exchanger SLC37A4 isoform X2
translation: MAAGGYGRYRAVIFAAMFVGYTLYYFNRKTFSFVMPAVMAEVPLGKDDLGLITSSQSAAYAISKFISGVLSDQMSARWLFSSGLLMVGLVNVVFSWSSTVTAFAGLWFLNGLAQGLGWPPCGKILRKWFEPSQFGTWWAILSASMNLAGGLGPIVAALVSMNYNWRMTLSSSGFTCVVVSFVCLVLIKNEPSDVGLPNIDQGAKKGKKGSSSDNSTLTELLLSPYLWVLSTGYLVVFGVKTCCTDWGQLFLIQERGQSMLVGSSYMSALEIGGLVGSIAAGYLSDRAVARVGLSSYGNPRHALLLSMMAGMCVSMFLFRVTVTGNSPKLWILTLGAVFGFSSYGPIALFGVIANESAPANLCGTSHAIVALMANVGGFLAGLPFSTIAKHYSWATAFWVAEITCICSTVAFFFLRNIRTKMGRIPKKAD
SIO_010081: SLC37A4
subclass of: SO_0000673
so part of: SLC37A4
location: complement(join(221190..221356,221645..221783,223154..223267,223528..223613,223985..224143,225400..225643,226806..227038,227128..227275))
location: region:221190-227275:-1
so has part: feature:227128-227275:-1:exon
so has part: feature:226806-227038:-1:exon
so has part: feature:225400-225643:-1:exon
so has part: feature:223985-224143:-1:exon
so has part: feature:223528-223613:-1:exon
so has part: feature:223154-223267:-1:exon
so has part: feature:221645-221783:-1:exon
so has part: feature:221190-221356:-1:exon

XP_032565570.1
type: Protein
SIO_000068: ncbiprotein

position:221190:-1
position: 221190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227275:-1
position: 227275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227128-227275:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:226806-227038:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:225400-225643:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:223985-224143:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:223528-223613:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:223154-223267:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:221645-221783:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:221190-221356:-1:exon

SLC37A4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SLC37A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphate exchanger SLC37A4 isoform X1
translation: MAAGGYGRYRAVIFAAMFVGYTLYYFNRKTFSFVMPAVMAEVPLGKDDLGLITSSQSAAYAISKFISGVLSDQMSARWLFSSGLLMVGLVNVVFSWSSTVTAFAGLWFLNGLAQGLGWPPCGKILRKWFEPSQFGTWWAILSASMNLAGGLGPIVAALVSMNYNWRMTLSSSGFTCVVVSFVCLVLIKNEPSDVGLPNIDQGAKKGKKGSSSDNSTLTELLLSPYLWVLSTGYLVVFGVKTCCTDWGQLFLIQERGQSMLVGSSYMSALEIGGLVGSIAAGYLSDRAVARVGLSSYGNPRHALLLSMMAGMCVSMFLFRVTVTGNSPKETHFWTVALQPLADLTGLKEHELWILTLGAVFGFSSYGPIALFGVIANESAPANLCGTSHAIVALMANVGGFLAGLPFSTIAKHYSWATAFWVAEITCICSTVAFFFLRNIRTKMGRIPKKAD
SIO_010081: SLC37A4
subclass of: SO_0000673
so part of: SLC37A4
location: complement(join(221190..221356,221645..221783,222826..222891,223154..223267,223528..223613,223985..224143,225400..225643,226806..227038,227128..227275))
location: region:221190-227275:-1
so has part: feature:227128-227275:-1:exon
so has part: feature:226806-227038:-1:exon
so has part: feature:225400-225643:-1:exon
so has part: feature:223985-224143:-1:exon
so has part: feature:223528-223613:-1:exon
so has part: feature:223154-223267:-1:exon
so has part: feature:222826-222891:-1:exon
so has part: feature:221645-221783:-1:exon
so has part: feature:221190-221356:-1:exon

XP_032565569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:227128-227275:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:226806-227038:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:225400-225643:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:223985-224143:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:223528-223613:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:223154-223267:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:222826-222891:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:221645-221783:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:221190-221356:-1:exon

HYOU1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: HYOU1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(227410..241075)
location: region:227410-241075:-1
so has part: feature:227410-241075:-1:exon
subclass of: SO_0000010

116797648
type: Gene
SIO_000068: ncbigene

position:227410:-1
position: 227410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241075:-1
position: 241075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227410-241075:-1:exon

HYOU1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: HYOU1
product: hypoxia up-regulated 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 15 long SRA reads, 6 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032709371.1
SIO_010081: HYOU1
subclass of: SO_0000673
so part of: HYOU1
location: complement(join(227410..228427,228937..229020,229880..230132,230576..230660,230986..231119,231416..231538,232091..232178,232341..232540,232698..232886,233026..233108,233399..233459,233572..233710,233975..234162,234490..234617,234719..234805,235692..235824,236236..236419,237167..237282,237860..238041,238945..239021,239117..239271,239514..239592,240443..240536,240676..240841,240935..241075))
location: region:227410-241075:-1
so has part: feature:240935-241075:-1:exon
so has part: feature:240676-240841:-1:exon
so has part: feature:240443-240536:-1:exon
so has part: feature:239514-239592:-1:exon
so has part: feature:239117-239271:-1:exon
so has part: feature:238945-239021:-1:exon
so has part: feature:237860-238041:-1:exon
so has part: feature:237167-237282:-1:exon
so has part: feature:236236-236419:-1:exon
so has part: feature:235692-235824:-1:exon
so has part: feature:234719-234805:-1:exon
so has part: feature:234490-234617:-1:exon
so has part: feature:233975-234162:-1:exon
so has part: feature:233572-233710:-1:exon
so has part: feature:233399-233459:-1:exon
so has part: feature:233026-233108:-1:exon
so has part: feature:232698-232886:-1:exon
so has part: feature:232341-232540:-1:exon
so has part: feature:232091-232178:-1:exon
so has part: feature:231416-231538:-1:exon
so has part: feature:230986-231119:-1:exon
so has part: feature:230576-230660:-1:exon
so has part: feature:229880-230132:-1:exon
so has part: feature:228937-229020:-1:exon
so has part: feature:227410-228427:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:240935-241075:-1:exon

position:240935:-1
position: 240935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:240676-240841:-1:exon

position:240676:-1
position: 240676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240841:-1
position: 240841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:240443-240536:-1:exon

position:240443:-1
position: 240443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240536:-1
position: 240536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:239514-239592:-1:exon

position:239514:-1
position: 239514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239592:-1
position: 239592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:239117-239271:-1:exon

position:239117:-1
position: 239117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239271:-1
position: 239271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:238945-239021:-1:exon

position:238945:-1
position: 238945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239021:-1
position: 239021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:237860-238041:-1:exon

position:237860:-1
position: 237860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238041:-1
position: 238041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:237167-237282:-1:exon

position:237167:-1
position: 237167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237282:-1
position: 237282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:236236-236419:-1:exon

position:236236:-1
position: 236236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236419:-1
position: 236419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:235692-235824:-1:exon

position:235692:-1
position: 235692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235824:-1
position: 235824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:234719-234805:-1:exon

position:234719:-1
position: 234719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234805:-1
position: 234805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:234490-234617:-1:exon

position:234490:-1
position: 234490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234617:-1
position: 234617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:233975-234162:-1:exon

position:233975:-1
position: 233975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234162:-1
position: 234162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:233572-233710:-1:exon

position:233572:-1
position: 233572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233710:-1
position: 233710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:233399-233459:-1:exon

position:233399:-1
position: 233399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233459:-1
position: 233459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:233026-233108:-1:exon

position:233026:-1
position: 233026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233108:-1
position: 233108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:232698-232886:-1:exon

position:232698:-1
position: 232698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232886:-1
position: 232886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:232341-232540:-1:exon

position:232341:-1
position: 232341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232540:-1
position: 232540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:232091-232178:-1:exon

position:232091:-1
position: 232091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232178:-1
position: 232178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:231416-231538:-1:exon

position:231416:-1
position: 231416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231538:-1
position: 231538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:230986-231119:-1:exon

position:230986:-1
position: 230986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231119:-1
position: 231119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:230576-230660:-1:exon

position:230576:-1
position: 230576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230660:-1
position: 230660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:229880-230132:-1:exon

position:229880:-1
position: 229880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230132:-1
position: 230132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:228937-229020:-1:exon

position:228937:-1
position: 228937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229020:-1
position: 229020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:227410-228427:-1:exon

position:228427:-1
position: 228427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HYOU1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: HYOU1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: hypoxia up-regulated protein 1
translation: MGARPPPVTTSGFPRRGPMGARAPRDWRAGPAPPNAPIRARRVRAGAPSPAQPGPTEPGRVQPSLTEPGLVQPSPVERCRAWRGCPAGAAWLLLLLCLLPAAEPVAVMSVDVGSESMKIAIVKPGVPMEIVLNKESRRKTPVAVSLKENERLFGDSALGMSIRTPKVAFRYFQDLLGKRMDNPHVALYQSRFPEHELVKDETRQTVIFKLSPTIQYSPEEMLGMVLNYSRGLAEEFAEQPIKDVVITVPAYFNQAERRAVLHAARMADLKVLQLINDNTAVALNYGVFRRKDINATAQNIMFYDMGAGSTICTIVTYQTVKTKDSGTQPQLQIQGIGFDRTLGGLEMELRLRDYLAKLFNEQHPSKDVRKNPRAMAKLLKEANRLKTVLSANADHVAQIEGLLDDIDFKAKVSRQEXEDLCSDLFKRXPGPVQQALSSAEMNMDGIDQVILVGGATRXPKVQEVLLKAVGKVKLGKNINADEAAAMGAVYQAAALSKAFKVKPFVVRDAAVFPIQVEFTREVEEDDKSRSLKHNKRILFQRMAPYPQRKVITFNRYTDDFEFYVNYGDLTFLSQDDLRVFGSLNLTTVRLKGVGESFKKHSDYESKGIKAHFNMDESGVLSLDRVESVFETLVEDKLEEESTLTKLGNTISSLFGGGSPTPETGENLTDTVQEEEESLAETGKEEQGEKQDQKSSTEDAGEEQGEEKQQSPGQAETASPKAESQKKEEGEKLEPQDPKENRETAKEEELSKSSGDSTAAKTEEEKKIKAPKKQKLVHEVTMEVDVNDVPDLVEDELKSSMKKLQDLTIRDLEKQEREKSANSLESFIFETQDKLYQEEYQFVSTEEQREEISKKLNEASSWMEEEGYAAATKELKDKLSELKKLCRNLFFRVEERRKWPERLAALESLLNHSTIFLKGARMIPEADQIFTEVELSTLEKAINETTIWKNETLAEQNKLSPTEKPVLLSKDIELKIAALDREVQYLLNKAKFAKPKPKREKNATKTDSAKNATAAPETENTIPPTEGKQEDKLEDIGPAKEPPTAEKAAIDAEPGSDSGSKSEKTQAGGESRKNDEL
SIO_010081: HYOU1
subclass of: SO_0000673
so part of: HYOU1
location: complement(join(228369..228427,228937..229020,229880..230132,230576..230660,230986..231119,231416..231538,232091..232178,232341..232540,232698..232886,233026..233108,233399..233459,233572..233710,233975..234162,234490..234617,234719..234805,235692..235824,236236..236419,237167..237282,237860..238041,238945..239021,239117..239271,239514..239592,240443..240536,240676..240841,240935..241075))
location: region:228369-241075:-1
so has part: feature:240935-241075:-1:exon
so has part: feature:240676-240841:-1:exon
so has part: feature:240443-240536:-1:exon
so has part: feature:239514-239592:-1:exon
so has part: feature:239117-239271:-1:exon
so has part: feature:238945-239021:-1:exon
so has part: feature:237860-238041:-1:exon
so has part: feature:237167-237282:-1:exon
so has part: feature:236236-236419:-1:exon
so has part: feature:235692-235824:-1:exon
so has part: feature:234719-234805:-1:exon
so has part: feature:234490-234617:-1:exon
so has part: feature:233975-234162:-1:exon
so has part: feature:233572-233710:-1:exon
so has part: feature:233399-233459:-1:exon
so has part: feature:233026-233108:-1:exon
so has part: feature:232698-232886:-1:exon
so has part: feature:232341-232540:-1:exon
so has part: feature:232091-232178:-1:exon
so has part: feature:231416-231538:-1:exon
so has part: feature:230986-231119:-1:exon
so has part: feature:230576-230660:-1:exon
so has part: feature:229880-230132:-1:exon
so has part: feature:228937-229020:-1:exon
so has part: feature:228369-228427:-1:exon

XP_032565262.1
type: Protein
SIO_000068: ncbiprotein

position:228369:-1
position: 228369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240935-241075:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:240676-240841:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:240443-240536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:239514-239592:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239117-239271:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:238945-239021:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:237860-238041:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:237167-237282:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:236236-236419:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:235692-235824:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:234719-234805:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:234490-234617:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:233975-234162:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:233572-233710:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:233399-233459:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:233026-233108:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:232698-232886:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:232341-232540:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:232091-232178:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:231416-231538:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:230986-231119:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:230576-230660:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:229880-230132:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:228937-229020:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:228369-228427:-1:exon

PHLDB1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: PHLDB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(241432..259950)
location: region:241432-259950:-1
so has part: feature:241432-259950:-1:exon
subclass of: SO_0000010

116797649
type: Gene
SIO_000068: ncbigene

position:241432:-1
position: 241432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259950:-1
position: 259950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241432-259950:-1:exon

PHLDB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PHLDB1
product: pleckstrin homology like domain family B member 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 8 bases in 8 codons; deleted 5 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032709372.1
SIO_010081: PHLDB1
subclass of: SO_0000673
so part of: PHLDB1
location: complement(join(241432..242136,242401..242486,242563..242782,242922..243068,243154..243244,243350..243641,244310..244403,244508..244623,244948..245297,247618..247742,247876..248010,248072..248225,249352..249477,251456..251592,251719..251855,251912..252171,252879..253374,253420..253952,255334..255486,257364..257534,257610..257731,258165..258266,259462..259950))
location: region:241432-259950:-1
so has part: feature:259462-259950:-1:exon
so has part: feature:258165-258266:-1:exon
so has part: feature:257610-257731:-1:exon
so has part: feature:257364-257534:-1:exon
so has part: feature:255334-255486:-1:exon
so has part: feature:253420-253952:-1:exon
so has part: feature:252879-253374:-1:exon
so has part: feature:251912-252171:-1:exon
so has part: feature:251719-251855:-1:exon
so has part: feature:251456-251592:-1:exon
so has part: feature:249352-249477:-1:exon
so has part: feature:248072-248225:-1:exon
so has part: feature:247876-248010:-1:exon
so has part: feature:247618-247742:-1:exon
so has part: feature:244948-245297:-1:exon
so has part: feature:244508-244623:-1:exon
so has part: feature:244310-244403:-1:exon
so has part: feature:243350-243641:-1:exon
so has part: feature:243154-243244:-1:exon
so has part: feature:242922-243068:-1:exon
so has part: feature:242563-242782:-1:exon
so has part: feature:242401-242486:-1:exon
so has part: feature:241432-242136:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:259462-259950:-1:exon

position:259462:-1
position: 259462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:258165-258266:-1:exon

position:258165:-1
position: 258165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258266:-1
position: 258266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:257610-257731:-1:exon

position:257610:-1
position: 257610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257731:-1
position: 257731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:257364-257534:-1:exon

position:257364:-1
position: 257364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257534:-1
position: 257534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:255334-255486:-1:exon

position:255334:-1
position: 255334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255486:-1
position: 255486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:253420-253952:-1:exon

position:253420:-1
position: 253420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253952:-1
position: 253952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:252879-253374:-1:exon

position:252879:-1
position: 252879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253374:-1
position: 253374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:251912-252171:-1:exon

position:251912:-1
position: 251912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252171:-1
position: 252171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:251719-251855:-1:exon

position:251719:-1
position: 251719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251855:-1
position: 251855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:251456-251592:-1:exon

position:251456:-1
position: 251456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251592:-1
position: 251592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:249352-249477:-1:exon

position:249352:-1
position: 249352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249477:-1
position: 249477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:248072-248225:-1:exon

position:248072:-1
position: 248072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248225:-1
position: 248225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:247876-248010:-1:exon

position:247876:-1
position: 247876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248010:-1
position: 248010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:247618-247742:-1:exon

position:247618:-1
position: 247618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247742:-1
position: 247742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:244948-245297:-1:exon

position:244948:-1
position: 244948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245297:-1
position: 245297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:244508-244623:-1:exon

position:244508:-1
position: 244508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244623:-1
position: 244623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:244310-244403:-1:exon

position:244310:-1
position: 244310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244403:-1
position: 244403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:243350-243641:-1:exon

position:243350:-1
position: 243350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243641:-1
position: 243641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:243154-243244:-1:exon

position:243154:-1
position: 243154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243244:-1
position: 243244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:242922-243068:-1:exon

position:242922:-1
position: 242922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243068:-1
position: 243068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:242563-242782:-1:exon

position:242563:-1
position: 242563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242782:-1
position: 242782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:242401-242486:-1:exon

position:242401:-1
position: 242401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242486:-1
position: 242486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:241432-242136:-1:exon

position:242136:-1
position: 242136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PHLDB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PHLDB1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 8 bases in 8 codons; deleted 5 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: pleckstrin homology-like domain family B member 1
translation: MGTLPWRVPLGSRTRWQQPVPRSIQYLQAGIMEAPGGTPTSPTHRVQNVIQNSPLDLIDTGKXLKVQTEKPHLVSXGSGRLSTAITLLPLEEGKTTIGTAMTDIVLQGPGLVPQHCYIENVQGTLTLHPCGNTCAIDGVTVRRPTRLTQGCTICLGQATFLRFNHPAEAKWMKSMIPAGGRSPAASMGCQQVGDPLYPRQEPEALVNGGHQPSERGCPSHSSLVSSIEKDLQDIIDSXVLEEPASPGIQKPPACGRSPLSPVVNGVDAASCPPTSPGAASGGSSYEXFSPLSSPTSSSSYTSXSLSSQEQGPPVPPVVHSAPPSYNHTVQPPTLPSGSPGEPWPVERLGDHRAGSPRLTPRGGTAATGGPTGAAPEPLPAVPEARLQPPESPRVARXNMESMRELPPLSPSLSRWAASPRAAPDAPSPQPRLGREVPGSPVQGARARKVERCREPLAPLLAETSTRRPSFGTCLSPTYGLSSPAMPSPHQSPRAPRKPWDPRLPAGPRERKNSITEISDNEDELLEYHRRQRQERVREQEMERLERQRLETILNLCAEYTKTDSTEPGDVPRLLAGDADPGRRVPRGAVALGRAAEELRQRESLEKSDEENLKEECSSTESTHHEVRGQLSRGVDRPRAKEAQRLEEERARVLGHLDQLKGRVKELEQQLQETSREAEMERALLQGERESEAARLRQEQEAVQQLQEKLSSLDASIARSGTRAKMMTAERKELEQLRCXYHESKSHLDKCPESMREQLREQMRREAEALETEAKLFEDLEFQQLERESXLEEEREARGQQLLQPGRVQTAASPAGSQLIPAASPQERWLPWMPKLPRFGCRVPEAERLNQERAASCSSCRSISSCPSALTVTVQENEAHVSEMRYQLVTGGMSFPKMSSALRTKVSYSCGGLAREYTGSLGVCTSNSGGVVQAQAGMLQPLLCASVPLAAFVLHPFSHGLSLQMEQQLPGGPMCLPALDLEKWYQEVMAGFETSSCPVSPPSSPPPLPAKAHSSHKALQVYRAKTEGDAGVPTPRMKSGTPRLRSSTSLCWGSPSPKGPPSPAGSLPRNLAATLQDIETKRQLALQQKGQQVIEEQKRRLAELKQKAAAEAQSQWEALHGQPPFPAAFPRLMHHSILHHHRPHGAGPRAEELDHAYDTLSLESSDSMETSISTGNNSACSPDNISSASGMETGKIEEMEKMLKEAHAEKSRLMESREREMELRRQALEDERRRREQLERRLQDETARRQKLVEKEVKLREKHFSQARPLTRYLPIRKEDFNLRLHIESSGHSVDTCYHVILTEKMCKGYLVKMGGKIKSWKKRWFVFDRMKRTLSYYMDKHETKLKGVIYFQAIEEVYYDHLRSAAKSPNPALTFCVKTHDRLYYMVAPSAEAMRIWMDVIVTGAEGYTQFMN
SIO_010081: PHLDB1
subclass of: SO_0000673
so part of: PHLDB1
location: complement(join(241996..242136,242401..242486,242563..242782,242922..243068,243154..243244,243350..243641,244310..244403,244508..244623,244948..245297,247618..247742,247876..248010,248072..248225,249352..249477,251456..251592,251719..251855,251912..252171,252879..253374,253420..253952,255334..255486,257364..257534,257610..257731,258165..258266,259462..259512))
location: region:241996-259512:-1
so has part: feature:259462-259512:-1:exon
so has part: feature:258165-258266:-1:exon
so has part: feature:257610-257731:-1:exon
so has part: feature:257364-257534:-1:exon
so has part: feature:255334-255486:-1:exon
so has part: feature:253420-253952:-1:exon
so has part: feature:252879-253374:-1:exon
so has part: feature:251912-252171:-1:exon
so has part: feature:251719-251855:-1:exon
so has part: feature:251456-251592:-1:exon
so has part: feature:249352-249477:-1:exon
so has part: feature:248072-248225:-1:exon
so has part: feature:247876-248010:-1:exon
so has part: feature:247618-247742:-1:exon
so has part: feature:244948-245297:-1:exon
so has part: feature:244508-244623:-1:exon
so has part: feature:244310-244403:-1:exon
so has part: feature:243350-243641:-1:exon
so has part: feature:243154-243244:-1:exon
so has part: feature:242922-243068:-1:exon
so has part: feature:242563-242782:-1:exon
so has part: feature:242401-242486:-1:exon
so has part: feature:241996-242136:-1:exon

XP_032565263.1
type: Protein
SIO_000068: ncbiprotein

position:241996:-1
position: 241996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259512:-1
position: 259512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259462-259512:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:258165-258266:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:257610-257731:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:257364-257534:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:255334-255486:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:253420-253952:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:252879-253374:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251912-252171:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:251719-251855:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:251456-251592:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:249352-249477:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:248072-248225:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:247876-248010:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:247618-247742:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:244948-245297:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:244508-244623:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:244310-244403:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:243350-243641:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:243154-243244:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:242922-243068:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:242563-242782:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:242401-242486:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:241996-242136:-1:exon

ARCN1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: ARCN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(262820..277507)
location: region:262820-277507:-1
so has part: feature:262820-277507:-1:exon
subclass of: SO_0000010

116797816
type: Gene
SIO_000068: ncbigene

position:262820:-1
position: 262820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277507:-1
position: 277507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262820-277507:-1:exon

ARCN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ARCN1
product: archain 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 6 bases in 6 codons; deleted 5 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 4 long SRA reads, 9 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032709669.1
SIO_010081: ARCN1
subclass of: SO_0000673
so part of: ARCN1
location: complement(join(262820..264422,264975..265179,265327..265436,265739..265885,267113..267277,267917..268077,268476..268682,268939..269119,269735..269998,275548..275645,275754..275840,275942..276226,276301..276591,276827..277507))
location: region:262820-277507:-1
so has part: feature:276827-277507:-1:exon
so has part: feature:276301-276591:-1:exon
so has part: feature:275942-276226:-1:exon
so has part: feature:275754-275840:-1:exon
so has part: feature:275548-275645:-1:exon
so has part: feature:269735-269998:-1:exon
so has part: feature:268939-269119:-1:exon
so has part: feature:268476-268682:-1:exon
so has part: feature:267917-268077:-1:exon
so has part: feature:267113-267277:-1:exon
so has part: feature:265739-265885:-1:exon
so has part: feature:265327-265436:-1:exon
so has part: feature:264975-265179:-1:exon
so has part: feature:262820-264422:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:276827-277507:-1:exon

position:276827:-1
position: 276827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:276301-276591:-1:exon

position:276301:-1
position: 276301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276591:-1
position: 276591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:275942-276226:-1:exon

position:275942:-1
position: 275942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276226:-1
position: 276226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:275754-275840:-1:exon

position:275754:-1
position: 275754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275840:-1
position: 275840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:275548-275645:-1:exon

position:275548:-1
position: 275548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275645:-1
position: 275645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:269735-269998:-1:exon

position:269735:-1
position: 269735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269998:-1
position: 269998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:268939-269119:-1:exon

position:268939:-1
position: 268939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269119:-1
position: 269119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:268476-268682:-1:exon

position:268476:-1
position: 268476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268682:-1
position: 268682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:267917-268077:-1:exon

position:267917:-1
position: 267917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268077:-1
position: 268077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:267113-267277:-1:exon

position:267113:-1
position: 267113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267277:-1
position: 267277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:265739-265885:-1:exon

position:265739:-1
position: 265739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265885:-1
position: 265885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:265327-265436:-1:exon

position:265327:-1
position: 265327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265436:-1
position: 265436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:264975-265179:-1:exon

position:264975:-1
position: 264975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265179:-1
position: 265179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:262820-264422:-1:exon

position:264422:-1
position: 264422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARCN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ARCN1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 6 bases in 6 codons; deleted 5 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: coatomer subunit delta
translation: MGCPRGWPGSALVPLLLLGLPALSSAGEAVVGSVALLRQQDPPAAALTCRGSPAGLGELGPTIDGQPWTVCTLQEGESRAFTCRVPQPVPGATLAWYLNGQRQEANLSAAGTASTVTLTARRSDHQLNCSLTDPASGRPXNASVLLNVQYKPEILRAGAHYQEVEGSGLLLVLFVLVQANPPASITWVDQDGHMMANASEFLLLGATHYPGLANHSLRIHLSSVAGNFSVSAANSVGITTTSLLPTGLLDAHVELPLLGVAVGAALALATLLSLGSCAACLACRSPKLVPGPGQAEGSSLPSRCSRCSGSEHPQPQGTRLPRQTRSLPPDLHLSDLAQEDGASPKDVGAGARGEDSAVPGLENHLVLNKLAPNVWAHLQSAQCKQRRDLAVNRGAHEPGAQPQVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERHGKKAPGLGGFGSSAVSGGTTAAMITETIIETEKPKVAPAPARPSGPSKALKLGAKGKEVDNFVDKLKSEGENIMTSVGKRSAEAAKFXAPPVNMESVHMKXEEKISLTCGRDGGLQNMELHGMIMLHISDEKFARIRLPVENEDKRGVQLQTHPNVDKKLFTTESQIGLKNPEKSXPINSDVGVLKWRLQTTEESFIPLTINCWPSESGNSCDVNIEYELQEESLELNDVIITIPLPSGVGTPVIGEIDGEYRHDAGENLLEWCLPVIDAXNKSGSLEFSIAGQPNDFFPVQVAFVSXKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKYEIL
SIO_010081: ARCN1
subclass of: SO_0000673
so part of: ARCN1
location: complement(join(264333..264422,264975..265179,265327..265436,265739..265885,267113..267277,267917..268077,268476..268682,268939..269119,269735..269998,275548..275645,275754..275840,275942..276226,276301..276591,276827..277273))
location: region:264333-277273:-1
so has part: feature:276827-277273:-1:exon
so has part: feature:276301-276591:-1:exon
so has part: feature:275942-276226:-1:exon
so has part: feature:275754-275840:-1:exon
so has part: feature:275548-275645:-1:exon
so has part: feature:269735-269998:-1:exon
so has part: feature:268939-269119:-1:exon
so has part: feature:268476-268682:-1:exon
so has part: feature:267917-268077:-1:exon
so has part: feature:267113-267277:-1:exon
so has part: feature:265739-265885:-1:exon
so has part: feature:265327-265436:-1:exon
so has part: feature:264975-265179:-1:exon
so has part: feature:264333-264422:-1:exon

XP_032565560.1
type: Protein
SIO_000068: ncbiprotein

position:264333:-1
position: 264333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277273:-1
position: 277273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276827-277273:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276301-276591:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:275942-276226:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:275754-275840:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:275548-275645:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:269735-269998:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:268939-269119:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:268476-268682:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:267917-268077:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:267113-267277:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:265739-265885:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:265327-265436:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:264975-265179:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:264333-264422:-1:exon

IFT46
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: IFT46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 271188..274924
location: region:271188-274924:1
so has part: feature:271188-274924:1:exon
subclass of: SO_0000010

116797817
type: Gene
SIO_000068: ncbigene

position:271188:1
position: 271188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274924:1
position: 274924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271188-274924:1:exon

IFT46
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: IFT46
product: intraflagellar transport 46
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032709670.1
SIO_010081: IFT46
subclass of: SO_0000673
so part of: IFT46
location: join(271188..271281,271627..271754,272268..272342,272440..272534,272823..272950,273343..273464,273548..273614,273862..273921,274156..274241,274584..274924)
location: region:271188-274924:1
so has part: feature:271188-271281:1:exon
so has part: feature:271627-271754:1:exon
so has part: feature:272268-272342:1:exon
so has part: feature:272440-272534:1:exon
so has part: feature:272823-272950:1:exon
so has part: feature:273343-273464:1:exon
so has part: feature:273548-273614:1:exon
so has part: feature:273862-273921:1:exon
so has part: feature:274156-274241:1:exon
so has part: feature:274584-274924:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:271188-271281:1:exon

position:271281:1
position: 271281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:271627-271754:1:exon

position:271627:1
position: 271627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271754:1
position: 271754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:272268-272342:1:exon

position:272268:1
position: 272268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272342:1
position: 272342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:272440-272534:1:exon

position:272440:1
position: 272440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272534:1
position: 272534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:272823-272950:1:exon

position:272823:1
position: 272823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272950:1
position: 272950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:273343-273464:1:exon

position:273343:1
position: 273343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273464:1
position: 273464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:273548-273614:1:exon

position:273548:1
position: 273548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273614:1
position: 273614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:273862-273921:1:exon

position:273862:1
position: 273862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273921:1
position: 273921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:274156-274241:1:exon

position:274156:1
position: 274156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274241:1
position: 274241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:274584-274924:1:exon

position:274584:1
position: 274584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IFT46
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: IFT46
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: intraflagellar transport protein 46 homolog
translation: MATAAARRDTGRAEEEAVAHPAALSEDDDEDDEDSEEDSSESDSEDDSEEQGAALEGDFNPADFDYLKVSSEIKDLFEYIRGTLPKTVEIEHKLQPFIPDFIPAVGDIDAFLKVPRPDWKPDNLGLLVLDEPSTKQSDPTVLSXWLTENSKQHNITQQIKVKSLENAEKNPKAIDSWIESISELHRCKPPATVHYSRPMPDIETLMQEWSPEFEELLGKVGLPTAEMSCDLAEYXDMICAILDIPVYKSRIQPLHVLFSLFSEFKNSQHFKPLADGQKGRSPPSNPPSQAAEAEVVSFT
SIO_010081: IFT46
subclass of: SO_0000673
so part of: IFT46
location: join(271240..271281,271627..271754,272268..272342,272440..272534,272823..272950,273343..273464,273548..273614,273862..273921,274156..274241,274584..274679)
location: region:271240-274679:1
so has part: feature:271240-271281:1:exon
so has part: feature:271627-271754:1:exon
so has part: feature:272268-272342:1:exon
so has part: feature:272440-272534:1:exon
so has part: feature:272823-272950:1:exon
so has part: feature:273343-273464:1:exon
so has part: feature:273548-273614:1:exon
so has part: feature:273862-273921:1:exon
so has part: feature:274156-274241:1:exon
so has part: feature:274584-274679:1:exon

XP_032565561.1
type: Protein
SIO_000068: ncbiprotein

position:271240:1
position: 271240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274679:1
position: 274679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271240-271281:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271627-271754:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:272268-272342:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:272440-272534:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:272823-272950:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:273343-273464:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:273548-273614:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:273862-273921:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:274156-274241:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:274584-274679:1:exon

TTC36
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: TTC36
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(277768..279111)
location: region:277768-279111:-1
so has part: feature:277768-279111:-1:exon
subclass of: SO_0000010

116797818
type: Gene
SIO_000068: ncbigene

position:277768:-1
position: 277768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279111:-1
position: 279111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277768-279111:-1:exon

TTC36
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: TTC36
product: tetratricopeptide repeat domain 36
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032709671.1
SIO_010081: TTC36
subclass of: SO_0000673
so part of: TTC36
location: complement(join(277768..278202,278274..278463,278716..279111))
location: region:277768-279111:-1
so has part: feature:278716-279111:-1:exon
so has part: feature:278274-278463:-1:exon
so has part: feature:277768-278202:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:278716-279111:-1:exon

position:278716:-1
position: 278716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:278274-278463:-1:exon

position:278274:-1
position: 278274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278463:-1
position: 278463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:277768-278202:-1:exon

position:278202:-1
position: 278202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TTC36
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: TTC36
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: tetratricopeptide repeat protein 36
translation: MATANDRAVLQTIFNPSTPFGDIPGLDEEEEDIELEVEAFPLELLEQVRDLELQGVSAAESGDVSTALKRFSEAIRLLPERASGYNNRAQALRLRGDVAGALQDLDTAIRLSRGRGRAACQSFVQRGLIHRLQARDEDARRDFECAARLGSAFARRQLVLLNPYSALCNQMLCEMLGRLRNPNGTGSE
SIO_010081: TTC36
subclass of: SO_0000673
so part of: TTC36
location: complement(join(277934..278202,278274..278463,278716..278824))
location: region:277934-278824:-1
so has part: feature:278716-278824:-1:exon
so has part: feature:278274-278463:-1:exon
so has part: feature:277934-278202:-1:exon

XP_032565562.1
type: Protein
SIO_000068: ncbiprotein

position:277934:-1
position: 277934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278824:-1
position: 278824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278716-278824:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:278274-278463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:277934-278202:-1:exon

KMT2A
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: KMT2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(279435..320593)
location: region:279435-320593:-1
so has part: feature:279435-320593:-1:exon
subclass of: SO_0000010

116797815
type: Gene
SIO_000068: ncbigene

position:279435:-1
position: 279435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320593:-1
position: 320593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279435-320593:-1:exon

KMT2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: KMT2A
product: lysine methyltransferase 2A
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 21 bases in 19 codons; deleted 13 bases in 12 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 3 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032709668.1
SIO_010081: KMT2A
subclass of: SO_0000673
so part of: KMT2A
location: complement(join(279435..283304,283670..283799,284188..284272,284669..284776,285153..285327,285585..285659,286185..286355,286736..286800,287320..287400,287691..291998,292624..292809,293454..293614,293866..293944,294029..294146,294436..294594,295107..295244,295383..295489,295838..296031,296517..296590,296838..296948,297776..297948,298528..298712,299064..299177,299938..300058,300856..300951,301199..301345,302504..302617,303473..303601,304237..304310,304927..305298,305817..305881,306853..307088,307474..307650,308934..311601,312253..312322,320264..320593))
location: region:279435-320593:-1
so has part: feature:320264-320593:-1:exon
so has part: feature:312253-312322:-1:exon
so has part: feature:308934-311601:-1:exon
so has part: feature:307474-307650:-1:exon
so has part: feature:306853-307088:-1:exon
so has part: feature:305817-305881:-1:exon
so has part: feature:304927-305298:-1:exon
so has part: feature:304237-304310:-1:exon
so has part: feature:303473-303601:-1:exon
so has part: feature:302504-302617:-1:exon
so has part: feature:301199-301345:-1:exon
so has part: feature:300856-300951:-1:exon
so has part: feature:299938-300058:-1:exon
so has part: feature:299064-299177:-1:exon
so has part: feature:298528-298712:-1:exon
so has part: feature:297776-297948:-1:exon
so has part: feature:296838-296948:-1:exon
so has part: feature:296517-296590:-1:exon
so has part: feature:295838-296031:-1:exon
so has part: feature:295383-295489:-1:exon
so has part: feature:295107-295244:-1:exon
so has part: feature:294436-294594:-1:exon
so has part: feature:294029-294146:-1:exon
so has part: feature:293866-293944:-1:exon
so has part: feature:293454-293614:-1:exon
so has part: feature:292624-292809:-1:exon
so has part: feature:287691-291998:-1:exon
so has part: feature:287320-287400:-1:exon
so has part: feature:286736-286800:-1:exon
so has part: feature:286185-286355:-1:exon
so has part: feature:285585-285659:-1:exon
so has part: feature:285153-285327:-1:exon
so has part: feature:284669-284776:-1:exon
so has part: feature:284188-284272:-1:exon
so has part: feature:283670-283799:-1:exon
so has part: feature:279435-283304:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:320264-320593:-1:exon

position:320264:-1
position: 320264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:312253-312322:-1:exon

position:312253:-1
position: 312253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312322:-1
position: 312322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:308934-311601:-1:exon

position:308934:-1
position: 308934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311601:-1
position: 311601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:307474-307650:-1:exon

position:307474:-1
position: 307474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307650:-1
position: 307650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:306853-307088:-1:exon

position:306853:-1
position: 306853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307088:-1
position: 307088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:305817-305881:-1:exon

position:305817:-1
position: 305817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305881:-1
position: 305881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:304927-305298:-1:exon

position:304927:-1
position: 304927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305298:-1
position: 305298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:304237-304310:-1:exon

position:304237:-1
position: 304237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304310:-1
position: 304310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:303473-303601:-1:exon

position:303473:-1
position: 303473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303601:-1
position: 303601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:302504-302617:-1:exon

position:302504:-1
position: 302504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302617:-1
position: 302617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:301199-301345:-1:exon

position:301199:-1
position: 301199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301345:-1
position: 301345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:300856-300951:-1:exon

position:300856:-1
position: 300856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300951:-1
position: 300951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:299938-300058:-1:exon

position:299938:-1
position: 299938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300058:-1
position: 300058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:299064-299177:-1:exon

position:299064:-1
position: 299064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299177:-1
position: 299177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:298528-298712:-1:exon

position:298528:-1
position: 298528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298712:-1
position: 298712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:297776-297948:-1:exon

position:297776:-1
position: 297776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297948:-1
position: 297948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:296838-296948:-1:exon

position:296838:-1
position: 296838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296948:-1
position: 296948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:296517-296590:-1:exon

position:296517:-1
position: 296517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296590:-1
position: 296590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:295838-296031:-1:exon

position:295838:-1
position: 295838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296031:-1
position: 296031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:295383-295489:-1:exon

position:295383:-1
position: 295383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295489:-1
position: 295489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:295107-295244:-1:exon

position:295107:-1
position: 295107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295244:-1
position: 295244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:294436-294594:-1:exon

position:294436:-1
position: 294436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294594:-1
position: 294594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:294029-294146:-1:exon

position:294029:-1
position: 294029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294146:-1
position: 294146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:293866-293944:-1:exon

position:293866:-1
position: 293866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293944:-1
position: 293944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:293454-293614:-1:exon

position:293454:-1
position: 293454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293614:-1
position: 293614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:292624-292809:-1:exon

position:292624:-1
position: 292624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292809:-1
position: 292809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:287691-291998:-1:exon

position:287691:-1
position: 287691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291998:-1
position: 291998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:287320-287400:-1:exon

position:287320:-1
position: 287320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287400:-1
position: 287400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:286736-286800:-1:exon

position:286736:-1
position: 286736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286800:-1
position: 286800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:286185-286355:-1:exon

position:286185:-1
position: 286185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286355:-1
position: 286355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:285585-285659:-1:exon

position:285585:-1
position: 285585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285659:-1
position: 285659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:285153-285327:-1:exon

position:285153:-1
position: 285153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285327:-1
position: 285327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:284669-284776:-1:exon

position:284669:-1
position: 284669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284776:-1
position: 284776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:284188-284272:-1:exon

position:284188:-1
position: 284188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284272:-1
position: 284272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:283670-283799:-1:exon

position:283670:-1
position: 283670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283799:-1
position: 283799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:279435-283304:-1:exon

position:283304:-1
position: 283304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KMT2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: KMT2A
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 21 bases in 19 codons; deleted 13 bases in 12 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: histone-lysine N-methyltransferase 2A
translation: MAHSGRWRFPARPGSGGWGRRGPGGSRLRVPAVHSLRPAEPAAAPAAAGEGERGGPCSGGAAGSGGGGAAPGPAAAAGPGFDAALQVSAAIGINLRRFRAACGAEAGSGEDEQFLGFGSDEEVKVRSPTRSPTVKSSPRKPRGRPXSSSDRSSAVLSDSSSVCSPSSKSETTSMEKVKKKESKSGEKRRGRPPTLTSVKFKLSQEKDTSDIQKGSKEXKESLKKIKRSPSTTFQQAAKIKKLRTSKLSPLKSKFKPGAKLQIGRKSVQIVRRRGRPPSSERVKTSSTLVINSQLEKPQRIRKEKDGTPPLTKEEKTAVRQSPRRIKPVRIIPSTKRTDATIAKQLLQRAXKGAQKKIEKEAAKLQGRKGRTQLKNIRQFIMPVVSAISSRIIKTPKRFIEDEDYDPPIKISRLESTPNSRFSATSCGSSEKSSAASQHSSQMSSDSSRSSSPSVDTSTDSQASEEMQTLSEERSNTPEVHTPLXVSQSPENDNGDRRNRRFSITERSFGQRTAKKLSTLPSVPQQQSSSSPPPPLLTPPPPLQPASSISDHTPWLMPPTIPLASPFLPASAAPMQEKRKSILREPTFRWTSLKHSRSEPQYFSSAKYAKEGLIRKPIFDNFRPPPLTPEDVGFASGFSTPGATAPTRLFSLHSGARFDMHKRSPLLRAPRFTPSEAHSRIFESVTLPSSVGRAATGTSAAGVSSRRRKRKAFSPIRSEPRSPSHSMRTRSGRLRTSDLTTLTPQSSVSSSLTSISVSSLATSALNSTFTFXSHSLSQSGESAERSQRPRKQTSAPAEPFSSSSPNPLFPWFTSSPQTERGRNKDRAAEELSKDKDADKXLEKDKSREKTERGKKENKRGVKEEKRRKGXEIQSSSALFPVGKMPKEKVVSEDVAASSSAKKTAGAKKKSTAVDPTADVSAAALVDTAAVKTKTSKKGRGGLDXSDLDVSPAVPSLEKEKALALSAPSSSTVKHSASSISSMLAQADKLPMTDKRVASLLKKAKAQLYKIEKSKSLKQADQPKAQGQESDSSETSVRGPRIKHVCRRAAVALGRKRAVFPDDMPTLSALPWEEREKILSSXGNDDKSSIAGSEEAEPLAPPIKPIKRLPRNKAQQEPPVKKGRRSRRCGPCSGCQVPADCGVCTNCLDKPKFGGRNIKKQCCKMRKCQNLQWMPSKAYLQKQAKAAKKKEKKSKTNEKKESHSGKNQLDSGQKQTPQAVAPREDSGGKKSGEPARKPVEEKHEDGNSSVPVSEPKPVPTSGTRKTGKQTFQQVQLPPSQPPSSGPLKKEAPKLSTSEPKKKQTPQPEIGTEQSKQKKIAPRPTFPVKQKPKEKEKPPPLSKPESSTLNLLSTLTNGSSSKQKPPTDGVHRIRVDFKEDCEVENVWEMGGLGIVTSVPITPRVVCFLCASSGHVEFVYCQVCCEPFHKFCLEESERPQEDQLENWCCRRCKFCHVCGRQHQATKQLLECNKCRNSYHPECLGPNYPTKPTKKKKVWICTKCVRCKSCGSTTPGKGWDAQWSHDFSLCHDCAKLFAKGNFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCINCTDQHPAEWRLALEKELQVSLKQVLTALLNSRTTSHLLRYRQAAKPPDLNPETEESIPSRSSPEGPDPPVLTEVSKQEEQQPLDLEGVKXKMDQGSYTSVLDFSDDIVKIIQAAINSDGGQPEVKKANSMVKSFFIRQMERVFPWFSVKKSRFWEPNKVTSNSGMLPNAVLPPSLDHNYAQWQEREENNRTEQPPLMKKIIPAPKPKGPGEPDSPTPLHPPTPPISGSDRSREDSPELNPPPDVEDNRQCALCLKYGDDSANDAGRLLYIGQNEWTHVNCALWSAEVFEDDDGSLKNVHMAVIRGKQLRCEFCQKSGATVGCCLTSCTSNYHFMCSRAKNCVFLDDKKVYCQRHRDLIKGEVVPENGFEVLRRVFVDFEGISLRRKFLSGLEPENIHMMIGSMTIDCL…
SIO_010081: KMT2A
subclass of: SO_0000673
so part of: KMT2A
location: complement(join(283029..283304,283670..283799,284188..284272,284669..284776,285153..285327,285585..285659,286185..286355,286736..286800,287320..287400,287691..291998,292624..292809,293454..293614,293866..293944,294029..294146,294436..294594,295107..295244,295383..295489,295838..296031,296517..296590,296838..296948,297776..297948,298528..298712,299064..299177,299938..300058,300856..300951,301199..301345,302504..302617,303473..303601,304237..304310,304927..305298,305817..305881,306853..307088,307474..307650,308934..311601,312253..312322,320264..320593))
location: region:283029-320593:-1
so has part: feature:320264-320593:-1:exon
so has part: feature:312253-312322:-1:exon
so has part: feature:308934-311601:-1:exon
so has part: feature:307474-307650:-1:exon
so has part: feature:306853-307088:-1:exon
so has part: feature:305817-305881:-1:exon
so has part: feature:304927-305298:-1:exon
so has part: feature:304237-304310:-1:exon
so has part: feature:303473-303601:-1:exon
so has part: feature:302504-302617:-1:exon
so has part: feature:301199-301345:-1:exon
so has part: feature:300856-300951:-1:exon
so has part: feature:299938-300058:-1:exon
so has part: feature:299064-299177:-1:exon
so has part: feature:298528-298712:-1:exon
so has part: feature:297776-297948:-1:exon
so has part: feature:296838-296948:-1:exon
so has part: feature:296517-296590:-1:exon
so has part: feature:295838-296031:-1:exon
so has part: feature:295383-295489:-1:exon
so has part: feature:295107-295244:-1:exon
so has part: feature:294436-294594:-1:exon
so has part: feature:294029-294146:-1:exon
so has part: feature:293866-293944:-1:exon
so has part: feature:293454-293614:-1:exon
so has part: feature:292624-292809:-1:exon
so has part: feature:287691-291998:-1:exon
so has part: feature:287320-287400:-1:exon
so has part: feature:286736-286800:-1:exon
so has part: feature:286185-286355:-1:exon
so has part: feature:285585-285659:-1:exon
so has part: feature:285153-285327:-1:exon
so has part: feature:284669-284776:-1:exon
so has part: feature:284188-284272:-1:exon
so has part: feature:283670-283799:-1:exon
so has part: feature:283029-283304:-1:exon

XP_032565559.1
type: Protein
SIO_000068: ncbiprotein

position:283029:-1
position: 283029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320264-320593:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:312253-312322:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:308934-311601:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:307474-307650:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:306853-307088:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:305817-305881:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:304927-305298:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:304237-304310:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:303473-303601:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:302504-302617:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:301199-301345:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:300856-300951:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:299938-300058:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:299064-299177:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:298528-298712:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:297776-297948:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:296838-296948:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:296517-296590:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:295838-296031:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:295383-295489:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:295107-295244:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:294436-294594:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:294029-294146:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:293866-293944:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:293454-293614:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:292624-292809:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:287691-291998:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:287320-287400:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:286736-286800:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:286185-286355:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:285585-285659:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:285153-285327:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:284669-284776:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:284188-284272:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:283670-283799:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:283029-283304:-1:exon

ATP5MG
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: ATP5MG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(322717..323955)
location: region:322717-323955:-1
so has part: feature:322717-323955:-1:exon
subclass of: SO_0000010

116797819
type: Gene
SIO_000068: ncbigene

position:322717:-1
position: 322717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323955:-1
position: 323955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322717-323955:-1:exon

ATP5MG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ATP5MG
product: ATP synthase membrane subunit g
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 mRNAs, 3 ESTs, 5 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_032709672.1
SIO_010081: ATP5MG
subclass of: SO_0000673
so part of: ATP5MG
location: complement(join(322717..322899,323467..323627,323816..323955))
location: region:322717-323955:-1
so has part: feature:323816-323955:-1:exon
so has part: feature:323467-323627:-1:exon
so has part: feature:322717-322899:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:323816-323955:-1:exon

position:323816:-1
position: 323816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:323467-323627:-1:exon

position:323467:-1
position: 323467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323627:-1
position: 323627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:322717-322899:-1:exon

position:322899:-1
position: 322899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP5MG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ATP5MG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase subunit g, mitochondrial
translation: MAKAAQGLVQRLVQRGPELLGAAVTYSKPRLATFWHYAKVELAPPTPAEIPRAIDGMKGLVRAFQSGRLAQLTVKEALRNGLVATEVLMWFYIGEIIGKRGIIGYDV
SIO_010081: ATP5MG
subclass of: SO_0000673
so part of: ATP5MG
location: complement(join(322801..322899,323467..323627,323816..323879))
location: region:322801-323879:-1
so has part: feature:323816-323879:-1:exon
so has part: feature:323467-323627:-1:exon
so has part: feature:322801-322899:-1:exon

XP_032565563.1
type: Protein
SIO_000068: ncbiprotein

position:322801:-1
position: 322801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323879:-1
position: 323879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323816-323879:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:323467-323627:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:322801-322899:-1:exon

UBE4A
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: UBE4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(324089..333942)
location: region:324089-333942:-1
so has part: feature:324089-333942:-1:exon
subclass of: SO_0000010

116797789
type: Gene
SIO_000068: ncbigene

position:324089:-1
position: 324089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333942:-1
position: 333942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324089-333942:-1:exon

UBE4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: UBE4A
product: ubiquitination factor E4A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 4 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032709631.1
SIO_010081: UBE4A
subclass of: SO_0000673
so part of: UBE4A
location: complement(join(324089..324763,324904..325061,325278..325425,325624..325804,325923..326097,326794..326907,327026..327126,327213..327400,328407..328539,329090..329397,330225..330351,330616..330949,331287..331478,331694..331896,332040..332199,332327..332479,333032..333144,333296..333472,333594..333758,333905..333942))
location: region:324089-333942:-1
so has part: feature:333905-333942:-1:exon
so has part: feature:333594-333758:-1:exon
so has part: feature:333296-333472:-1:exon
so has part: feature:333032-333144:-1:exon
so has part: feature:332327-332479:-1:exon
so has part: feature:332040-332199:-1:exon
so has part: feature:331694-331896:-1:exon
so has part: feature:331287-331478:-1:exon
so has part: feature:330616-330949:-1:exon
so has part: feature:330225-330351:-1:exon
so has part: feature:329090-329397:-1:exon
so has part: feature:328407-328539:-1:exon
so has part: feature:327213-327400:-1:exon
so has part: feature:327026-327126:-1:exon
so has part: feature:326794-326907:-1:exon
so has part: feature:325923-326097:-1:exon
so has part: feature:325624-325804:-1:exon
so has part: feature:325278-325425:-1:exon
so has part: feature:324904-325061:-1:exon
so has part: feature:324089-324763:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:333905-333942:-1:exon

position:333905:-1
position: 333905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:333594-333758:-1:exon

position:333594:-1
position: 333594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333758:-1
position: 333758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:333296-333472:-1:exon

position:333296:-1
position: 333296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333472:-1
position: 333472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:333032-333144:-1:exon

position:333032:-1
position: 333032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333144:-1
position: 333144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:332327-332479:-1:exon

position:332327:-1
position: 332327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332479:-1
position: 332479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:332040-332199:-1:exon

position:332040:-1
position: 332040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332199:-1
position: 332199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:331694-331896:-1:exon

position:331694:-1
position: 331694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331896:-1
position: 331896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:331287-331478:-1:exon

position:331287:-1
position: 331287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331478:-1
position: 331478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:330616-330949:-1:exon

position:330616:-1
position: 330616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330949:-1
position: 330949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:330225-330351:-1:exon

position:330225:-1
position: 330225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330351:-1
position: 330351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:329090-329397:-1:exon

position:329090:-1
position: 329090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329397:-1
position: 329397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:328407-328539:-1:exon

position:328407:-1
position: 328407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328539:-1
position: 328539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:327213-327400:-1:exon

position:327213:-1
position: 327213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327400:-1
position: 327400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:327026-327126:-1:exon

position:327026:-1
position: 327026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327126:-1
position: 327126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:326794-326907:-1:exon

position:326794:-1
position: 326794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326907:-1
position: 326907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:325923-326097:-1:exon

position:325923:-1
position: 325923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326097:-1
position: 326097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:325624-325804:-1:exon

position:325624:-1
position: 325624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325804:-1
position: 325804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:325278-325425:-1:exon

position:325278:-1
position: 325278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325425:-1
position: 325425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:324904-325061:-1:exon

position:324904:-1
position: 324904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325061:-1
position: 325061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:324089-324763:-1:exon

position:324763:-1
position: 324763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UBE4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: UBE4A
product: ubiquitination factor E4A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 3 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_032709628.1
SIO_010081: UBE4A
subclass of: SO_0000673
so part of: UBE4A
location: complement(join(324089..324763,324904..325061,325278..325425,325624..325804,325923..326097,326794..326907,327026..327126,327213..327400,328407..328539,329090..329397,330225..330351,330616..330949,331287..331478,331694..331896,332040..332199,332327..332479,333032..333144,333296..333472,333594..333828))
location: region:324089-333828:-1
so has part: feature:333594-333828:-1:exon
so has part: feature:333296-333472:-1:exon
so has part: feature:333032-333144:-1:exon
so has part: feature:332327-332479:-1:exon
so has part: feature:332040-332199:-1:exon
so has part: feature:331694-331896:-1:exon
so has part: feature:331287-331478:-1:exon
so has part: feature:330616-330949:-1:exon
so has part: feature:330225-330351:-1:exon
so has part: feature:329090-329397:-1:exon
so has part: feature:328407-328539:-1:exon
so has part: feature:327213-327400:-1:exon
so has part: feature:327026-327126:-1:exon
so has part: feature:326794-326907:-1:exon
so has part: feature:325923-326097:-1:exon
so has part: feature:325624-325804:-1:exon
so has part: feature:325278-325425:-1:exon
so has part: feature:324904-325061:-1:exon
so has part: feature:324089-324763:-1:exon

position:333828:-1
position: 333828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333594-333828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:333296-333472:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:333032-333144:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:332327-332479:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:332040-332199:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:331694-331896:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:331287-331478:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:330616-330949:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:330225-330351:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:329090-329397:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:328407-328539:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:327213-327400:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:327026-327126:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:326794-326907:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:325923-326097:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:325624-325804:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:325278-325425:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:324904-325061:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:324089-324763:-1:exon

UBE4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: UBE4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin conjugation factor E4 A
translation: MTDQENNNSISSNPFAALFGSVAAAKHFAAIQKQQQLRQLTGEETSISQDDSDNSVSESLDDCDYSVAEISRSFRSQRELCEQLNINHMIQRIFLITLDNSDPSMKSGNGIPARCVYLEEMAADLDDQDWLDMDNVEQALFTRLLLPEPGSHLIHMTCASTQNLSADRDAGERHILRYLYACFRRAREEITKVPENLLPFAVRCRNLTVSNTRTVLLTPEIYVNQNVYEQLVDLMLEALRGAQFEDMTEFLEEVIEALTMDEEVRTFGEVMVPVFDILLGRIKDLDLCQILLYTYLDVLLYFTKQKDIAKVFAGYIQPKDPSNGQMYQKTLLGAILNISCLLKTPGVVENHGYFLNPSRSSPQEIKVQESNIHQFMAQFHEKIYQMLKNLLQLSPETKHRILSWLGNCLHANAGRTKIWANQMPEIFFQMYASDAFFLNLGAALLKLCQPFCKPKSPRLLTFNPTYCALKELNEEERRSKNVHMKGLEKETCLIPALSEQEPEFANSYNLVTENLVLTQYTLHLGFHRLHDQMVKINQSLHRLQVAWREAQQSSSPAADSLREQFERLMTIYLSTKTAMTEPQMLQNCLNLQVSMAVLLVQLAMGNHGTEPLELSFPLPEVEHSALAYVPEFFADNLGDFFIFLRRFADDILETSADSLEHILHFVTVFMGDVERMKNPHLRAKLAEVLEAVMPHLDQAQNPLVSSVFHRKRVFCSYQHAAHLAEALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILRYMWGTDSYRESIKALADYASENLEAMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKIKVQQIEKDRGEWDSLSPEARREKESSLQMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICTIYLNLGDEENFCATVPKDGRSYSPTLFAQTVRVLKKINKPGNMIVSFSNLAERIKSLADRQQQEEETYADACDEFLDPIMSTLMSDPVILPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKERIQQWLAERKKQKEELEDTLN
SIO_010081: UBE4A
subclass of: SO_0000673
so part of: UBE4A
location: complement(join(324625..324763,324904..325061,325278..325425,325624..325804,325923..326097,326794..326907,327026..327126,327213..327400,328407..328539,329090..329397,330225..330351,330616..330949,331287..331478,331694..331896,332040..332199,332327..332479,333032..333144,333296..333472,333594..333717))
location: region:324625-333717:-1
so has part: feature:333594-333717:-1:exon
so has part: feature:333296-333472:-1:exon
so has part: feature:333032-333144:-1:exon
so has part: feature:332327-332479:-1:exon
so has part: feature:332040-332199:-1:exon
so has part: feature:331694-331896:-1:exon
so has part: feature:331287-331478:-1:exon
so has part: feature:330616-330949:-1:exon
so has part: feature:330225-330351:-1:exon
so has part: feature:329090-329397:-1:exon
so has part: feature:328407-328539:-1:exon
so has part: feature:327213-327400:-1:exon
so has part: feature:327026-327126:-1:exon
so has part: feature:326794-326907:-1:exon
so has part: feature:325923-326097:-1:exon
so has part: feature:325624-325804:-1:exon
so has part: feature:325278-325425:-1:exon
so has part: feature:324904-325061:-1:exon
so has part: feature:324625-324763:-1:exon

XP_032565519.1
type: Protein
SIO_000068: ncbiprotein

position:324625:-1
position: 324625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333717:-1
position: 333717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333594-333717:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:333296-333472:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:333032-333144:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:332327-332479:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:332040-332199:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:331694-331896:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:331287-331478:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:330616-330949:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:330225-330351:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:329090-329397:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:328407-328539:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:327213-327400:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:327026-327126:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:326794-326907:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:325923-326097:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:325624-325804:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:325278-325425:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:324904-325061:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:324625-324763:-1:exon

UBE4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: UBE4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin conjugation factor E4 A
translation: MTDQENNNSISSNPFAALFGSVAAAKHFAAIQKQQQLRQLTGEETSISQDDSDNSVSESLDDCDYSVAEISRSFRSQRELCEQLNINHMIQRIFLITLDNSDPSMKSGNGIPARCVYLEEMAADLDDQDWLDMDNVEQALFTRLLLPEPGSHLIHMTCASTQNLSADRDAGERHILRYLYACFRRAREEITKVPENLLPFAVRCRNLTVSNTRTVLLTPEIYVNQNVYEQLVDLMLEALRGAQFEDMTEFLEEVIEALTMDEEVRTFGEVMVPVFDILLGRIKDLDLCQILLYTYLDVLLYFTKQKDIAKVFAGYIQPKDPSNGQMYQKTLLGAILNISCLLKTPGVVENHGYFLNPSRSSPQEIKVQESNIHQFMAQFHEKIYQMLKNLLQLSPETKHRILSWLGNCLHANAGRTKIWANQMPEIFFQMYASDAFFLNLGAALLKLCQPFCKPKSPRLLTFNPTYCALKELNEEERRSKNVHMKGLEKETCLIPALSEQEPEFANSYNLVTENLVLTQYTLHLGFHRLHDQMVKINQSLHRLQVAWREAQQSSSPAADSLREQFERLMTIYLSTKTAMTEPQMLQNCLNLQVSMAVLLVQLAMGNHGTEPLELSFPLPEVEHSALAYVPEFFADNLGDFFIFLRRFADDILETSADSLEHILHFVTVFMGDVERMKNPHLRAKLAEVLEAVMPHLDQAQNPLVSSVFHRKRVFCSYQHAAHLAEALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILRYMWGTDSYRESIKALADYASENLEAMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKIKVQQIEKDRGEWDSLSPEARREKESSLQMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICTIYLNLGDEENFCATVPKDGRSYSPTLFAQTVRVLKKINKPGNMIVSFSNLAERIKSLADRQQQEEETYADACDEFLDPIMSTLMSDPVILPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKERIQQWLAERKKQKEELEDTLN
SIO_010081: UBE4A
subclass of: SO_0000673
so part of: UBE4A
location: complement(join(324625..324763,324904..325061,325278..325425,325624..325804,325923..326097,326794..326907,327026..327126,327213..327400,328407..328539,329090..329397,330225..330351,330616..330949,331287..331478,331694..331896,332040..332199,332327..332479,333032..333144,333296..333472,333594..333717))
location: region:324625-333717:-1
so has part: feature:333594-333717:-1:exon
so has part: feature:333296-333472:-1:exon
so has part: feature:333032-333144:-1:exon
so has part: feature:332327-332479:-1:exon
so has part: feature:332040-332199:-1:exon
so has part: feature:331694-331896:-1:exon
so has part: feature:331287-331478:-1:exon
so has part: feature:330616-330949:-1:exon
so has part: feature:330225-330351:-1:exon
so has part: feature:329090-329397:-1:exon
so has part: feature:328407-328539:-1:exon
so has part: feature:327213-327400:-1:exon
so has part: feature:327026-327126:-1:exon
so has part: feature:326794-326907:-1:exon
so has part: feature:325923-326097:-1:exon
so has part: feature:325624-325804:-1:exon
so has part: feature:325278-325425:-1:exon
so has part: feature:324904-325061:-1:exon
so has part: feature:324625-324763:-1:exon

XP_032565522.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333594-333717:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:333296-333472:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:333032-333144:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:332327-332479:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:332040-332199:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:331694-331896:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:331287-331478:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:330616-330949:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:330225-330351:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:329090-329397:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:328407-328539:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:327213-327400:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:327026-327126:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:326794-326907:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:325923-326097:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:325624-325804:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:325278-325425:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:324904-325061:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:324625-324763:-1:exon

LOC116797650
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116797650
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(334748..338806)
location: region:334748-338806:-1
so has part: feature:334748-338806:-1:exon
subclass of: SO_0000010

116797650
type: Gene
SIO_000068: ncbigene

position:334748:-1
position: 334748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338806:-1
position: 338806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334748-338806:-1:exon

LOC116797650
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116797650
product: G protein-activated inward rectifier potassium channel 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032709374.1
SIO_010081: LOC116797650
subclass of: SO_0000673
so part of: LOC116797650
location: complement(join(334748..335091,335302..336505,336615..336836,337485..337703,338437..338806))
location: region:334748-338806:-1
so has part: feature:338437-338806:-1:exon
so has part: feature:337485-337703:-1:exon
so has part: feature:336615-336836:-1:exon
so has part: feature:335302-336505:-1:exon
so has part: feature:334748-335091:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:338437-338806:-1:exon

position:338437:-1
position: 338437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:337485-337703:-1:exon

position:337485:-1
position: 337485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337703:-1
position: 337703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:336615-336836:-1:exon

position:336615:-1
position: 336615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336836:-1
position: 336836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:335302-336505:-1:exon

position:335302:-1
position: 335302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336505:-1
position: 336505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:334748-335091:-1:exon

position:335091:-1
position: 335091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116797650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116797650
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein-activated inward rectifier potassium channel 4-like
translation: MVLPYARNSGGAGGWGAPEEPRGRSNSIPAAQTPTAKHMLAYLPRPPTDTSRYGTFPQKPDVPATPEALVEDGRQQTTAAAAAATAAAKRSAPMPNYPSAPRRGGFVPSEASLPLSRGSLAAQHLRGRPSWCPPPAPQDPGARLYPLHALSVANIPNSSRGKTSARSSTVPAPEGLPSRRCKLLEEDNPMVQSGKRQRQRYVTKVGKCQVNLGNIQDKKRFLSDIFTTIVDLKYRWFLFVFMMCYIVTWVVFGFIYFFDAWVRGDVGHQGDPEWQACIENVDGFISALLLSVESQRTIGYGTRMVTANCTEGVILLMAQSIVGSMIDAMMVGCMFVKISRPKKRAQTLIFSKNCVISRRDEKLCLMFRVGDLRESHMVDAKIRAKLIKSRQTAEGEFIPLEQSELNLGYDTGEDRLFLVEPQIICHVINRHSPFWDMSAESLRRDQFEIIIILEGIVEATGMTCQARTSYTEDEILWGYRFEPCMSLEKGAFHVDYSRFEMTFEVQTPVASAKELHELKELEQQDHSTLSLYWDHLVHPCALPGPGEDALGGMSGPGSVAEGTRDEPPEQEFPA
SIO_010081: LOC116797650
subclass of: SO_0000673
so part of: LOC116797650
location: complement(join(334748..335091,335302..336505,336615..336791))
location: region:334748-336791:-1
so has part: feature:336615-336791:-1:exon
so has part: feature:335302-336505:-1:exon
so has part: feature:334748-335091:-1:exon

XP_032565265.1
type: Protein
SIO_000068: ncbiprotein

position:336791:-1
position: 336791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336615-336791:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:335302-336505:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334748-335091:-1:exon

LOC116797722
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116797722
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 338567..340006
location: region:338567-340006:1
so has part: feature:338567-340006:1:exon
subclass of: SO_0000010

116797722
type: Gene
SIO_000068: ncbigene

position:338567:1
position: 338567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340006:1
position: 340006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338567-340006:1:exon

LOC116797722
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116797722
product: putative claudin-24
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032709534.1
SIO_010081: LOC116797722
subclass of: SO_0000673
so part of: LOC116797722
location: 338567..340006
location: region:338567-340006:1
so has part: feature:338567-340006:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:338567-340006:1:exon

LOC116797722
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116797722
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative claudin-24
translation: MAGGWWAKAQAGGMLLALLGWVSSCVTTFVPLWKNLNLDLNELEVWNMGLWQVCITQEEGAVECQAHGSFLALPPELRISRLLMCASNGLGLLGCLLAAMGLDSWRACEDKPGQKQRLLLAGGAVLGTAGITTLVPVSWVAYNTVLDFWDETVPDIVPRWEFGEATFLGWFAGAFLAAGGLLLACSARSTSTATPPAPACRQLPTTRGPGGGHHPPPKIADLVI
SIO_010081: LOC116797722
subclass of: SO_0000673
so part of: LOC116797722
location: 339005..339679
location: region:339005-339679:1
so has part: feature:339005-339679:1:exon

XP_032565425.1
type: Protein
SIO_000068: ncbiprotein

position:339005:1
position: 339005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339679:1
position: 339679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339005-339679:1:exon

USP28
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: USP28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(341681..364457)
location: region:341681-364457:-1
so has part: feature:341681-364457:-1:exon
subclass of: SO_0000010

116797707
type: Gene
SIO_000068: ncbigene

position:341681:-1
position: 341681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364457:-1
position: 364457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341681-364457:-1:exon

USP28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: USP28
product: ubiquitin specific peptidase 28, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 6 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032709503.1
SIO_010081: USP28
subclass of: SO_0000673
so part of: USP28
location: complement(join(341681..342855,344229..344427,344941..345064,346138..346217,346566..346644,346738..346916,347757..347852,348754..348939,349117..349256,349778..349978,351339..351567,351876..351946,352187..352401,353088..353267,354123..354218,354391..354518,356483..356631,356749..356825,357311..357384,357824..357961,358796..358882,359811..359973,360163..360274,360772..360904,361177..361254,363840..364178))
location: region:341681-364178:-1
so has part: feature:363840-364178:-1:exon
so has part: feature:361177-361254:-1:exon
so has part: feature:360772-360904:-1:exon
so has part: feature:360163-360274:-1:exon
so has part: feature:359811-359973:-1:exon
so has part: feature:358796-358882:-1:exon
so has part: feature:357824-357961:-1:exon
so has part: feature:357311-357384:-1:exon
so has part: feature:356749-356825:-1:exon
so has part: feature:356483-356631:-1:exon
so has part: feature:354391-354518:-1:exon
so has part: feature:354123-354218:-1:exon
so has part: feature:353088-353267:-1:exon
so has part: feature:352187-352401:-1:exon
so has part: feature:351876-351946:-1:exon
so has part: feature:351339-351567:-1:exon
so has part: feature:349778-349978:-1:exon
so has part: feature:349117-349256:-1:exon
so has part: feature:348754-348939:-1:exon
so has part: feature:347757-347852:-1:exon
so has part: feature:346738-346916:-1:exon
so has part: feature:346566-346644:-1:exon
so has part: feature:346138-346217:-1:exon
so has part: feature:344941-345064:-1:exon
so has part: feature:344229-344427:-1:exon
so has part: feature:341681-342855:-1:exon

position:364178:-1
position: 364178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363840-364178:-1:exon

position:363840:-1
position: 363840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:361177-361254:-1:exon

position:361177:-1
position: 361177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361254:-1
position: 361254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:360772-360904:-1:exon

position:360772:-1
position: 360772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360904:-1
position: 360904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:360163-360274:-1:exon

position:360163:-1
position: 360163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360274:-1
position: 360274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:359811-359973:-1:exon

position:359811:-1
position: 359811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359973:-1
position: 359973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:358796-358882:-1:exon

position:358796:-1
position: 358796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358882:-1
position: 358882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:357824-357961:-1:exon

position:357824:-1
position: 357824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357961:-1
position: 357961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:357311-357384:-1:exon

position:357311:-1
position: 357311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357384:-1
position: 357384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:356749-356825:-1:exon

position:356749:-1
position: 356749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356825:-1
position: 356825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:356483-356631:-1:exon

position:356483:-1
position: 356483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356631:-1
position: 356631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:354391-354518:-1:exon

position:354391:-1
position: 354391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354518:-1
position: 354518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:354123-354218:-1:exon

position:354123:-1
position: 354123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354218:-1
position: 354218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:353088-353267:-1:exon

position:353088:-1
position: 353088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353267:-1
position: 353267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:352187-352401:-1:exon

position:352187:-1
position: 352187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352401:-1
position: 352401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:351876-351946:-1:exon

position:351876:-1
position: 351876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351946:-1
position: 351946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:351339-351567:-1:exon

position:351339:-1
position: 351339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351567:-1
position: 351567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:349778-349978:-1:exon

position:349778:-1
position: 349778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349978:-1
position: 349978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:349117-349256:-1:exon

position:349117:-1
position: 349117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349256:-1
position: 349256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:348754-348939:-1:exon

position:348754:-1
position: 348754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348939:-1
position: 348939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:347757-347852:-1:exon

position:347757:-1
position: 347757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347852:-1
position: 347852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:346738-346916:-1:exon

position:346738:-1
position: 346738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346916:-1
position: 346916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:346566-346644:-1:exon

position:346566:-1
position: 346566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346644:-1
position: 346644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:346138-346217:-1:exon

position:346138:-1
position: 346138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346217:-1
position: 346217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:344941-345064:-1:exon

position:344941:-1
position: 344941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345064:-1
position: 345064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:344229-344427:-1:exon

position:344229:-1
position: 344229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344427:-1
position: 344427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:341681-342855:-1:exon

position:342855:-1
position: 342855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

USP28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: USP28
product: ubiquitin specific peptidase 28, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 6 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032709505.1
SIO_010081: USP28
subclass of: SO_0000673
so part of: USP28
location: complement(join(341770..342855,344229..344427,344941..345064,346138..346217,346566..346644,346738..346916,347757..347852,348754..348939,349117..349256,349778..349978,351339..351567,351876..351946,352187..352401,353088..353267,354123..354218,354391..354518,356483..356631,356749..356825,357311..357384,357824..357961,358796..358882,359811..359973,360163..360274,360772..360904,361177..361254,364428..364457))
location: region:341770-364457:-1
so has part: feature:364428-364457:-1:exon
so has part: feature:361177-361254:-1:exon
so has part: feature:360772-360904:-1:exon
so has part: feature:360163-360274:-1:exon
so has part: feature:359811-359973:-1:exon
so has part: feature:358796-358882:-1:exon
so has part: feature:357824-357961:-1:exon
so has part: feature:357311-357384:-1:exon
so has part: feature:356749-356825:-1:exon
so has part: feature:356483-356631:-1:exon
so has part: feature:354391-354518:-1:exon
so has part: feature:354123-354218:-1:exon
so has part: feature:353088-353267:-1:exon
so has part: feature:352187-352401:-1:exon
so has part: feature:351876-351946:-1:exon
so has part: feature:351339-351567:-1:exon
so has part: feature:349778-349978:-1:exon
so has part: feature:349117-349256:-1:exon
so has part: feature:348754-348939:-1:exon
so has part: feature:347757-347852:-1:exon
so has part: feature:346738-346916:-1:exon
so has part: feature:346566-346644:-1:exon
so has part: feature:346138-346217:-1:exon
so has part: feature:344941-345064:-1:exon
so has part: feature:344229-344427:-1:exon
so has part: feature:341770-342855:-1:exon

position:341770:-1
position: 341770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364428-364457:-1:exon

position:364428:-1
position: 364428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:361177-361254:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:360772-360904:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:360163-360274:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:359811-359973:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:358796-358882:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:357824-357961:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:357311-357384:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:356749-356825:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:356483-356631:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:354391-354518:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:354123-354218:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:353088-353267:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:352187-352401:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:351876-351946:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:351339-351567:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:349778-349978:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:349117-349256:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:348754-348939:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:347757-347852:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:346738-346916:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:346566-346644:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:346138-346217:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:344941-345064:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:344229-344427:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:341770-342855:-1:exon

USP28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: USP28
product: ubiquitin specific peptidase 28, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 6 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032709504.1
SIO_010081: USP28
subclass of: SO_0000673
so part of: USP28
location: complement(join(341770..342855,344229..344427,344941..345064,346138..346217,346566..346644,346738..346916,347757..347852,348754..348939,349117..349256,349778..349978,351339..351567,351876..351946,352187..352401,353088..353267,354123..354218,354391..354518,356483..356631,356749..356825,357311..357384,357824..357961,358796..358882,359811..359973,360163..360274,360772..360904,361177..361254,363855..364177))
location: region:341770-364177:-1
so has part: feature:363855-364177:-1:exon
so has part: feature:361177-361254:-1:exon
so has part: feature:360772-360904:-1:exon
so has part: feature:360163-360274:-1:exon
so has part: feature:359811-359973:-1:exon
so has part: feature:358796-358882:-1:exon
so has part: feature:357824-357961:-1:exon
so has part: feature:357311-357384:-1:exon
so has part: feature:356749-356825:-1:exon
so has part: feature:356483-356631:-1:exon
so has part: feature:354391-354518:-1:exon
so has part: feature:354123-354218:-1:exon
so has part: feature:353088-353267:-1:exon
so has part: feature:352187-352401:-1:exon
so has part: feature:351876-351946:-1:exon
so has part: feature:351339-351567:-1:exon
so has part: feature:349778-349978:-1:exon
so has part: feature:349117-349256:-1:exon
so has part: feature:348754-348939:-1:exon
so has part: feature:347757-347852:-1:exon
so has part: feature:346738-346916:-1:exon
so has part: feature:346566-346644:-1:exon
so has part: feature:346138-346217:-1:exon
so has part: feature:344941-345064:-1:exon
so has part: feature:344229-344427:-1:exon
so has part: feature:341770-342855:-1:exon

position:364177:-1
position: 364177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363855-364177:-1:exon

position:363855:-1
position: 363855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:361177-361254:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:360772-360904:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:360163-360274:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:359811-359973:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:358796-358882:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:357824-357961:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:357311-357384:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:356749-356825:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:356483-356631:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:354391-354518:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:354123-354218:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:353088-353267:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:352187-352401:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:351876-351946:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:351339-351567:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:349778-349978:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:349117-349256:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:348754-348939:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:347757-347852:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:346738-346916:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:346566-346644:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:346138-346217:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:344941-345064:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:344229-344427:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:341770-342855:-1:exon

USP28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: USP28
product: ubiquitin specific peptidase 28, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 7 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032709507.1
SIO_010081: USP28
subclass of: SO_0000673
so part of: USP28
location: complement(join(341770..342855,344229..344427,344941..345064,346138..346217,346566..346644,346738..346916,349117..349256,349778..349978,351339..351567,351876..351946,352187..352401,353088..353267,354123..354218,354391..354518,356483..356631,356749..356825,357311..357384,357824..357961,358796..358882,359811..359973,360163..360274,360772..360904,361177..361254,363840..364177))
location: region:341770-364177:-1
so has part: feature:363840-364177:-1:exon
so has part: feature:361177-361254:-1:exon
so has part: feature:360772-360904:-1:exon
so has part: feature:360163-360274:-1:exon
so has part: feature:359811-359973:-1:exon
so has part: feature:358796-358882:-1:exon
so has part: feature:357824-357961:-1:exon
so has part: feature:357311-357384:-1:exon
so has part: feature:356749-356825:-1:exon
so has part: feature:356483-356631:-1:exon
so has part: feature:354391-354518:-1:exon
so has part: feature:354123-354218:-1:exon
so has part: feature:353088-353267:-1:exon
so has part: feature:352187-352401:-1:exon
so has part: feature:351876-351946:-1:exon
so has part: feature:351339-351567:-1:exon
so has part: feature:349778-349978:-1:exon
so has part: feature:349117-349256:-1:exon
so has part: feature:346738-346916:-1:exon
so has part: feature:346566-346644:-1:exon
so has part: feature:346138-346217:-1:exon
so has part: feature:344941-345064:-1:exon
so has part: feature:344229-344427:-1:exon
so has part: feature:341770-342855:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:363840-364177:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361177-361254:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:360772-360904:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:360163-360274:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:359811-359973:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:358796-358882:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:357824-357961:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:357311-357384:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:356749-356825:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:356483-356631:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:354391-354518:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:354123-354218:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:353088-353267:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:352187-352401:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:351876-351946:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:351339-351567:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:349778-349978:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:349117-349256:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:346738-346916:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:346566-346644:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:346138-346217:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:344941-345064:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:344229-344427:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:341770-342855:-1:exon

USP28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: USP28
product: ubiquitin specific peptidase 28, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 6 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032709506.1
SIO_010081: USP28
subclass of: SO_0000673
so part of: USP28
location: complement(join(341770..342855,344229..344427,344941..345064,346138..346217,346566..346644,346738..346916,348754..348939,349117..349256,349778..349978,351339..351567,351876..351946,352187..352401,353088..353267,354123..354218,354391..354518,356483..356631,356749..356825,357311..357384,357824..357961,358796..358882,359811..359973,360163..360274,360772..360904,361177..361254,363840..364177))
location: region:341770-364177:-1
so has part: feature:363840-364177:-1:exon
so has part: feature:361177-361254:-1:exon
so has part: feature:360772-360904:-1:exon
so has part: feature:360163-360274:-1:exon
so has part: feature:359811-359973:-1:exon
so has part: feature:358796-358882:-1:exon
so has part: feature:357824-357961:-1:exon
so has part: feature:357311-357384:-1:exon
so has part: feature:356749-356825:-1:exon
so has part: feature:356483-356631:-1:exon
so has part: feature:354391-354518:-1:exon
so has part: feature:354123-354218:-1:exon
so has part: feature:353088-353267:-1:exon
so has part: feature:352187-352401:-1:exon
so has part: feature:351876-351946:-1:exon
so has part: feature:351339-351567:-1:exon
so has part: feature:349778-349978:-1:exon
so has part: feature:349117-349256:-1:exon
so has part: feature:348754-348939:-1:exon
so has part: feature:346738-346916:-1:exon
so has part: feature:346566-346644:-1:exon
so has part: feature:346138-346217:-1:exon
so has part: feature:344941-345064:-1:exon
so has part: feature:344229-344427:-1:exon
so has part: feature:341770-342855:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:363840-364177:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361177-361254:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:360772-360904:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:360163-360274:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:359811-359973:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:358796-358882:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:357824-357961:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:357311-357384:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:356749-356825:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:356483-356631:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:354391-354518:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:354123-354218:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:353088-353267:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:352187-352401:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:351876-351946:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:351339-351567:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:349778-349978:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:349117-349256:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:348754-348939:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:346738-346916:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:346566-346644:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:346138-346217:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:344941-345064:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:344229-344427:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:341770-342855:-1:exon

USP28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: USP28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 28 isoform X2
translation: MRVREDCQMLLNQMKEITGIQNSALLLAALKAANGDLMEAVTFLTEEHAQEPTQDVAAAEPSAWEGSAVGKQLPQDVSAAPAPLNQDNLHTANTVRPLESPKAPAAERDAAERPQDTHSTENKNRSKRKRCEVWGENSKQNDWRRAGDWPVGMKNIGNTCWFSAVIQSLFQLPEFRRLVLGYSLSQKVLESCRSHTGKRNIAFMQELQSLFALMLGTRRKFVDPSAALELLRDVFRSAEEPQQDVSEFTHKLLDWLEDAFQLTVNVTNPGDKSKNPMVQLFYGTFLTEGVHEGNTFSKIETFGQYPLQVNGYRNLSECLEGAMVEGEMDEATASESVKYGQERWFTKLPPVLTFELSRFEFNQSLGQPEKIHTKLEFPQTIYMDRYLYCNKELIQIKREEMKRLKEKMVILQQKLERYMEYGSGPARFPLPDMLQYMLEFITTKPAVAVPSAQGSQTTLLHSQAEPHVSDVLSQPNGILERTDTGTEDGAFFLANSSPQQNSNMELQPSVPPAELSEHPAPHVVSEEELNLVRTCLQRWRNEIKQDVQDLKESIARTNLSMEQMYLDPLLQQVPYHLHAVLVHEGQANAGHYWAFIYNQPRKRWLKYNDISVTESSWEELERESFGGLRNTSAYCLMYISDQVSCVGADEDEGPEAVQIQKEVEALTPALRQHIQEDNWRLEQEAEEWEEEQSCKIPQMEPSRASELQDFSESGPDQLSVCEQSVHSLSSEHARIAKEQTAKAIANTADAYEKNGVEAALCEPKEAEPLKAQPGETALTVQAEQPQDSQEAEAAAQTSSQVSEVEIPSVGKIPVRSDADGYNEEVMLSPAMQGVILAIAKARQTFDRDGSEAGLVKAFHEEYSRLYLLSKETPTPQNDARLQHVLIYFLQNNAPQQVVERTLLEQFADKNLSYDERSISIMKVARAKLREIGPDDVDMEEYRRWHEDYSLFRKVSIYLLTGLELYQNRKYQESLTYLVHAYQSNEKLLLKGINRGVNESLIALYRRKCLLKLNEVAASLFVSSEEAHVSEGVSILNEQIIPCMHLMNNFDISREDLEAIEVMRNHWCSYLGREDMDEKLQMKLGELLPRLLEGSNEVIVLKEPPKIRPNTPYDLCSRFAAVMESIHGASTVTVK
SIO_010081: USP28
subclass of: SO_0000673
so part of: USP28
location: complement(join(342680..342855,344229..344427,344941..345064,346138..346217,346566..346644,346738..346916,347757..347852,348754..348939,349117..349256,349778..349978,351339..351567,351876..351946,352187..352401,353088..353267,354123..354218,354391..354518,356483..356631,356749..356825,357311..357384,357824..357961,358796..358882,359811..359973,360163..360274,360772..360904,361177..361254,363855..363869))
location: region:342680-363869:-1
so has part: feature:363855-363869:-1:exon
so has part: feature:361177-361254:-1:exon
so has part: feature:360772-360904:-1:exon
so has part: feature:360163-360274:-1:exon
so has part: feature:359811-359973:-1:exon
so has part: feature:358796-358882:-1:exon
so has part: feature:357824-357961:-1:exon
so has part: feature:357311-357384:-1:exon
so has part: feature:356749-356825:-1:exon
so has part: feature:356483-356631:-1:exon
so has part: feature:354391-354518:-1:exon
so has part: feature:354123-354218:-1:exon
so has part: feature:353088-353267:-1:exon
so has part: feature:352187-352401:-1:exon
so has part: feature:351876-351946:-1:exon
so has part: feature:351339-351567:-1:exon
so has part: feature:349778-349978:-1:exon
so has part: feature:349117-349256:-1:exon
so has part: feature:348754-348939:-1:exon
so has part: feature:347757-347852:-1:exon
so has part: feature:346738-346916:-1:exon
so has part: feature:346566-346644:-1:exon
so has part: feature:346138-346217:-1:exon
so has part: feature:344941-345064:-1:exon
so has part: feature:344229-344427:-1:exon
so has part: feature:342680-342855:-1:exon

XP_032565395.1
type: Protein
SIO_000068: ncbiprotein

position:342680:-1
position: 342680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363869:-1
position: 363869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363855-363869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361177-361254:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:360772-360904:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:360163-360274:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:359811-359973:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:358796-358882:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:357824-357961:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:357311-357384:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:356749-356825:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:356483-356631:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:354391-354518:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:354123-354218:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:353088-353267:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:352187-352401:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:351876-351946:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:351339-351567:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:349778-349978:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:349117-349256:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:348754-348939:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:347757-347852:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:346738-346916:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:346566-346644:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:346138-346217:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:344941-345064:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:344229-344427:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:342680-342855:-1:exon

USP28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: USP28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 28 isoform X5
translation: MRVREVRVTADCQMLLNQMKEITGIQNSALLLAALKAANGDLMEAVTFLTEEHAQEPTQDVAAAEPSAWEGSAVGKQLPQDVSAAPAPLNQDNLHTANTVRPLESPKAPAAERDAAERPQDTHSTENKNRSKRKRCEVWGENSKQNDWRRAGDWPVGMKNIGNTCWFSAVIQSLFQLPEFRRLVLGYSLSQKVLESCRSHTGKRNIAFMQELQSLFALMLGTRRKFVDPSAALELLRDVFRSAEEPQQDVSEFTHKLLDWLEDAFQLTVNVTNPGDKSKNPMVQLFYGTFLTEGVHEGNTFSKIETFGQYPLQVNGYRNLSECLEGAMVEGEMDEATASESVKYGQERWFTKLPPVLTFELSRFEFNQSLGQPEKIHTKLEFPQTIYMDRYLYCNKELIQIKREEMKRLKEKMVILQQKLERYMEYGSGPARFPLPDMLQYMLEFITTKPAVAVPSAQGSQTTLLHSQAEPHVSDVLSQPNGILERTDTGTEDGAFFLANSSPQQNSNMELQPSVPPAELSEHPAPHVVSEEELNLVRTCLQRWRNEIKQDVQDLKESIARTNLSMEQMYLDPLLQQVPYHLHAVLVHEGQANAGHYWAFIYNQPRKRWLKYNDISVTESSWEELERESFGGLRNTSAYCLMYISDQVSCVGADEDEGPEAVQIQKEVEALTPALRQHIQEDNWRLEQEAEEWEEEQSCKIPQMEPSRASELQDFSESGPDQLSVCEQSVHSLSSEHARIAKEQTAKAIANTADAYEKNGVEAALCEAFHEEYSRLYLLSKETPTPQNDARLQHVLIYFLQNNAPQQVVERTLLEQFADKNLSYDERSISIMKVARAKLREIGPDDVDMEEYRRWHEDYSLFRKVSIYLLTGLELYQNRKYQESLTYLVHAYQSNEKLLLKGINRGVNESLIALYRRKCLLKLNEVAASLFVSSEEAHVSEGVSILNEQIIPCMHLMNNFDISREDLEAIEVMRNHWCSYLGREDMDEKLQMKLGELLPRLLEGSNEVIVLKEPPKIRPNTPYDLCSRFAAVMESIHGASTVTVK
SIO_010081: USP28
subclass of: SO_0000673
so part of: USP28
location: complement(join(342680..342855,344229..344427,344941..345064,346138..346217,346566..346644,346738..346916,349117..349256,349778..349978,351339..351567,351876..351946,352187..352401,353088..353267,354123..354218,354391..354518,356483..356631,356749..356825,357311..357384,357824..357961,358796..358882,359811..359973,360163..360274,360772..360904,361177..361254,363840..363869))
location: region:342680-363869:-1
so has part: feature:363840-363869:-1:exon
so has part: feature:361177-361254:-1:exon
so has part: feature:360772-360904:-1:exon
so has part: feature:360163-360274:-1:exon
so has part: feature:359811-359973:-1:exon
so has part: feature:358796-358882:-1:exon
so has part: feature:357824-357961:-1:exon
so has part: feature:357311-357384:-1:exon
so has part: feature:356749-356825:-1:exon
so has part: feature:356483-356631:-1:exon
so has part: feature:354391-354518:-1:exon
so has part: feature:354123-354218:-1:exon
so has part: feature:353088-353267:-1:exon
so has part: feature:352187-352401:-1:exon
so has part: feature:351876-351946:-1:exon
so has part: feature:351339-351567:-1:exon
so has part: feature:349778-349978:-1:exon
so has part: feature:349117-349256:-1:exon
so has part: feature:346738-346916:-1:exon
so has part: feature:346566-346644:-1:exon
so has part: feature:346138-346217:-1:exon
so has part: feature:344941-345064:-1:exon
so has part: feature:344229-344427:-1:exon
so has part: feature:342680-342855:-1:exon

XP_032565398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:363840-363869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361177-361254:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:360772-360904:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:360163-360274:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:359811-359973:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:358796-358882:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:357824-357961:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:357311-357384:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:356749-356825:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:356483-356631:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:354391-354518:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:354123-354218:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:353088-353267:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:352187-352401:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:351876-351946:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:351339-351567:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:349778-349978:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:349117-349256:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:346738-346916:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:346566-346644:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:346138-346217:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:344941-345064:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:344229-344427:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:342680-342855:-1:exon

USP28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: USP28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 28 isoform X4
translation: MRVREVRVTADCQMLLNQMKEITGIQNSALLLAALKAANGDLMEAVTFLTEEHAQEPTQDVAAAEPSAWEGSAVGKQLPQDVSAAPAPLNQDNLHTANTVRPLESPKAPAAERDAAERPQDTHSTENKNRSKRKRCEVWGENSKQNDWRRAGDWPVGMKNIGNTCWFSAVIQSLFQLPEFRRLVLGYSLSQKVLESCRSHTGKRNIAFMQELQSLFALMLGTRRKFVDPSAALELLRDVFRSAEEPQQDVSEFTHKLLDWLEDAFQLTVNVTNPGDKSKNPMVQLFYGTFLTEGVHEGNTFSKIETFGQYPLQVNGYRNLSECLEGAMVEGEMDEATASESVKYGQERWFTKLPPVLTFELSRFEFNQSLGQPEKIHTKLEFPQTIYMDRYLYCNKELIQIKREEMKRLKEKMVILQQKLERYMEYGSGPARFPLPDMLQYMLEFITTKPAVAVPSAQGSQTTLLHSQAEPHVSDVLSQPNGILERTDTGTEDGAFFLANSSPQQNSNMELQPSVPPAELSEHPAPHVVSEEELNLVRTCLQRWRNEIKQDVQDLKESIARTNLSMEQMYLDPLLQQVPYHLHAVLVHEGQANAGHYWAFIYNQPRKRWLKYNDISVTESSWEELERESFGGLRNTSAYCLMYISDQVSCVGADEDEGPEAVQIQKEVEALTPALRQHIQEDNWRLEQEAEEWEEEQSCKIPQMEPSRASELQDFSESGPDQLSVCEQSVHSLSSEHARIAKEQTAKAIANTADAYEKNGVEAALCEPKEAEPLKAQPGETALTVQAEQPQDSQEAEAAAQTSSQVSEVEIPSVGKIPVRSDADGYNEEAFHEEYSRLYLLSKETPTPQNDARLQHVLIYFLQNNAPQQVVERTLLEQFADKNLSYDERSISIMKVARAKLREIGPDDVDMEEYRRWHEDYSLFRKVSIYLLTGLELYQNRKYQESLTYLVHAYQSNEKLLLKGINRGVNESLIALYRRKCLLKLNEVAASLFVSSEEAHVSEGVSILNEQIIPCMHLMNNFDISREDLEAIEVMRNHWCSYLGREDMDEKLQMKLGELLPRLLEGSNEVIVLKEPPKIRPNTPYDLCSRFAAVMESIHGASTVTVK
SIO_010081: USP28
subclass of: SO_0000673
so part of: USP28
location: complement(join(342680..342855,344229..344427,344941..345064,346138..346217,346566..346644,346738..346916,348754..348939,349117..349256,349778..349978,351339..351567,351876..351946,352187..352401,353088..353267,354123..354218,354391..354518,356483..356631,356749..356825,357311..357384,357824..357961,358796..358882,359811..359973,360163..360274,360772..360904,361177..361254,363840..363869))
location: region:342680-363869:-1
so has part: feature:363840-363869:-1:exon
so has part: feature:361177-361254:-1:exon
so has part: feature:360772-360904:-1:exon
so has part: feature:360163-360274:-1:exon
so has part: feature:359811-359973:-1:exon
so has part: feature:358796-358882:-1:exon
so has part: feature:357824-357961:-1:exon
so has part: feature:357311-357384:-1:exon
so has part: feature:356749-356825:-1:exon
so has part: feature:356483-356631:-1:exon
so has part: feature:354391-354518:-1:exon
so has part: feature:354123-354218:-1:exon
so has part: feature:353088-353267:-1:exon
so has part: feature:352187-352401:-1:exon
so has part: feature:351876-351946:-1:exon
so has part: feature:351339-351567:-1:exon
so has part: feature:349778-349978:-1:exon
so has part: feature:349117-349256:-1:exon
so has part: feature:348754-348939:-1:exon
so has part: feature:346738-346916:-1:exon
so has part: feature:346566-346644:-1:exon
so has part: feature:346138-346217:-1:exon
so has part: feature:344941-345064:-1:exon
so has part: feature:344229-344427:-1:exon
so has part: feature:342680-342855:-1:exon

XP_032565397.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:363840-363869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361177-361254:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:360772-360904:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:360163-360274:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:359811-359973:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:358796-358882:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:357824-357961:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:357311-357384:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:356749-356825:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:356483-356631:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:354391-354518:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:354123-354218:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:353088-353267:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:352187-352401:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:351876-351946:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:351339-351567:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:349778-349978:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:349117-349256:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:348754-348939:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:346738-346916:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:346566-346644:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:346138-346217:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:344941-345064:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:344229-344427:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:342680-342855:-1:exon

USP28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: USP28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 28 isoform X1
translation: MRVREVRVTADCQMLLNQMKEITGIQNSALLLAALKAANGDLMEAVTFLTEEHAQEPTQDVAAAEPSAWEGSAVGKQLPQDVSAAPAPLNQDNLHTANTVRPLESPKAPAAERDAAERPQDTHSTENKNRSKRKRCEVWGENSKQNDWRRAGDWPVGMKNIGNTCWFSAVIQSLFQLPEFRRLVLGYSLSQKVLESCRSHTGKRNIAFMQELQSLFALMLGTRRKFVDPSAALELLRDVFRSAEEPQQDVSEFTHKLLDWLEDAFQLTVNVTNPGDKSKNPMVQLFYGTFLTEGVHEGNTFSKIETFGQYPLQVNGYRNLSECLEGAMVEGEMDEATASESVKYGQERWFTKLPPVLTFELSRFEFNQSLGQPEKIHTKLEFPQTIYMDRYLYCNKELIQIKREEMKRLKEKMVILQQKLERYMEYGSGPARFPLPDMLQYMLEFITTKPAVAVPSAQGSQTTLLHSQAEPHVSDVLSQPNGILERTDTGTEDGAFFLANSSPQQNSNMELQPSVPPAELSEHPAPHVVSEEELNLVRTCLQRWRNEIKQDVQDLKESIARTNLSMEQMYLDPLLQQVPYHLHAVLVHEGQANAGHYWAFIYNQPRKRWLKYNDISVTESSWEELERESFGGLRNTSAYCLMYISDQVSCVGADEDEGPEAVQIQKEVEALTPALRQHIQEDNWRLEQEAEEWEEEQSCKIPQMEPSRASELQDFSESGPDQLSVCEQSVHSLSSEHARIAKEQTAKAIANTADAYEKNGVEAALCEPKEAEPLKAQPGETALTVQAEQPQDSQEAEAAAQTSSQVSEVEIPSVGKIPVRSDADGYNEEVMLSPAMQGVILAIAKARQTFDRDGSEAGLVKAFHEEYSRLYLLSKETPTPQNDARLQHVLIYFLQNNAPQQVVERTLLEQFADKNLSYDERSISIMKVARAKLREIGPDDVDMEEYRRWHEDYSLFRKVSIYLLTGLELYQNRKYQESLTYLVHAYQSNEKLLLKGINRGVNESLIALYRRKCLLKLNEVAASLFVSSEEAHVSEGVSILNEQIIPCMHLMNNFDISREDLEAIEVMRNHWCSYLGREDMDEKLQMKLGELLPRLLEGSNEVIVLKEPPKIRPNTPYDLCSRFAAVMESIHGASTVTVK
SIO_010081: USP28
subclass of: SO_0000673
so part of: USP28
location: complement(join(342680..342855,344229..344427,344941..345064,346138..346217,346566..346644,346738..346916,347757..347852,348754..348939,349117..349256,349778..349978,351339..351567,351876..351946,352187..352401,353088..353267,354123..354218,354391..354518,356483..356631,356749..356825,357311..357384,357824..357961,358796..358882,359811..359973,360163..360274,360772..360904,361177..361254,363840..363869))
location: region:342680-363869:-1
so has part: feature:363840-363869:-1:exon
so has part: feature:361177-361254:-1:exon
so has part: feature:360772-360904:-1:exon
so has part: feature:360163-360274:-1:exon
so has part: feature:359811-359973:-1:exon
so has part: feature:358796-358882:-1:exon
so has part: feature:357824-357961:-1:exon
so has part: feature:357311-357384:-1:exon
so has part: feature:356749-356825:-1:exon
so has part: feature:356483-356631:-1:exon
so has part: feature:354391-354518:-1:exon
so has part: feature:354123-354218:-1:exon
so has part: feature:353088-353267:-1:exon
so has part: feature:352187-352401:-1:exon
so has part: feature:351876-351946:-1:exon
so has part: feature:351339-351567:-1:exon
so has part: feature:349778-349978:-1:exon
so has part: feature:349117-349256:-1:exon
so has part: feature:348754-348939:-1:exon
so has part: feature:347757-347852:-1:exon
so has part: feature:346738-346916:-1:exon
so has part: feature:346566-346644:-1:exon
so has part: feature:346138-346217:-1:exon
so has part: feature:344941-345064:-1:exon
so has part: feature:344229-344427:-1:exon
so has part: feature:342680-342855:-1:exon

XP_032565394.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:363840-363869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361177-361254:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:360772-360904:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:360163-360274:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:359811-359973:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:358796-358882:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:357824-357961:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:357311-357384:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:356749-356825:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:356483-356631:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:354391-354518:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:354123-354218:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:353088-353267:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:352187-352401:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:351876-351946:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:351339-351567:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:349778-349978:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:349117-349256:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:348754-348939:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:347757-347852:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:346738-346916:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:346566-346644:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:346138-346217:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:344941-345064:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:344229-344427:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:342680-342855:-1:exon

USP28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: USP28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 28 isoform X3
translation: MLLNQMKEITGIQNSALLLAALKAANGDLMEAVTFLTEEHAQEPTQDVAAAEPSAWEGSAVGKQLPQDVSAAPAPLNQDNLHTANTVRPLESPKAPAAERDAAERPQDTHSTENKNRSKRKRCEVWGENSKQNDWRRAGDWPVGMKNIGNTCWFSAVIQSLFQLPEFRRLVLGYSLSQKVLESCRSHTGKRNIAFMQELQSLFALMLGTRRKFVDPSAALELLRDVFRSAEEPQQDVSEFTHKLLDWLEDAFQLTVNVTNPGDKSKNPMVQLFYGTFLTEGVHEGNTFSKIETFGQYPLQVNGYRNLSECLEGAMVEGEMDEATASESVKYGQERWFTKLPPVLTFELSRFEFNQSLGQPEKIHTKLEFPQTIYMDRYLYCNKELIQIKREEMKRLKEKMVILQQKLERYMEYGSGPARFPLPDMLQYMLEFITTKPAVAVPSAQGSQTTLLHSQAEPHVSDVLSQPNGILERTDTGTEDGAFFLANSSPQQNSNMELQPSVPPAELSEHPAPHVVSEEELNLVRTCLQRWRNEIKQDVQDLKESIARTNLSMEQMYLDPLLQQVPYHLHAVLVHEGQANAGHYWAFIYNQPRKRWLKYNDISVTESSWEELERESFGGLRNTSAYCLMYISDQVSCVGADEDEGPEAVQIQKEVEALTPALRQHIQEDNWRLEQEAEEWEEEQSCKIPQMEPSRASELQDFSESGPDQLSVCEQSVHSLSSEHARIAKEQTAKAIANTADAYEKNGVEAALCEPKEAEPLKAQPGETALTVQAEQPQDSQEAEAAAQTSSQVSEVEIPSVGKIPVRSDADGYNEEVMLSPAMQGVILAIAKARQTFDRDGSEAGLVKAFHEEYSRLYLLSKETPTPQNDARLQHVLIYFLQNNAPQQVVERTLLEQFADKNLSYDERSISIMKVARAKLREIGPDDVDMEEYRRWHEDYSLFRKVSIYLLTGLELYQNRKYQESLTYLVHAYQSNEKLLLKGINRGVNESLIALYRRKCLLKLNEVAASLFVSSEEAHVSEGVSILNEQIIPCMHLMNNFDISREDLEAIEVMRNHWCSYLGREDMDEKLQMKLGELLPRLLEGSNEVIVLKEPPKIRPNTPYDLCSRFAAVMESIHGASTVTVK
SIO_010081: USP28
subclass of: SO_0000673
so part of: USP28
location: complement(join(342680..342855,344229..344427,344941..345064,346138..346217,346566..346644,346738..346916,347757..347852,348754..348939,349117..349256,349778..349978,351339..351567,351876..351946,352187..352401,353088..353267,354123..354218,354391..354518,356483..356631,356749..356825,357311..357384,357824..357961,358796..358882,359811..359973,360163..360274,360772..360904,361177..361245))
location: region:342680-361245:-1
so has part: feature:361177-361245:-1:exon
so has part: feature:360772-360904:-1:exon
so has part: feature:360163-360274:-1:exon
so has part: feature:359811-359973:-1:exon
so has part: feature:358796-358882:-1:exon
so has part: feature:357824-357961:-1:exon
so has part: feature:357311-357384:-1:exon
so has part: feature:356749-356825:-1:exon
so has part: feature:356483-356631:-1:exon
so has part: feature:354391-354518:-1:exon
so has part: feature:354123-354218:-1:exon
so has part: feature:353088-353267:-1:exon
so has part: feature:352187-352401:-1:exon
so has part: feature:351876-351946:-1:exon
so has part: feature:351339-351567:-1:exon
so has part: feature:349778-349978:-1:exon
so has part: feature:349117-349256:-1:exon
so has part: feature:348754-348939:-1:exon
so has part: feature:347757-347852:-1:exon
so has part: feature:346738-346916:-1:exon
so has part: feature:346566-346644:-1:exon
so has part: feature:346138-346217:-1:exon
so has part: feature:344941-345064:-1:exon
so has part: feature:344229-344427:-1:exon
so has part: feature:342680-342855:-1:exon

XP_032565396.1
type: Protein
SIO_000068: ncbiprotein

position:361245:-1
position: 361245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361177-361245:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:360772-360904:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:360163-360274:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:359811-359973:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:358796-358882:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:357824-357961:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:357311-357384:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:356749-356825:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:356483-356631:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:354391-354518:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:354123-354218:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:353088-353267:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:352187-352401:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:351876-351946:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:351339-351567:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:349778-349978:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:349117-349256:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:348754-348939:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:347757-347852:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:346738-346916:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:346566-346644:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:346138-346217:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:344941-345064:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:344229-344427:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:342680-342855:-1:exon

LOC116797687
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116797687
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 369634..375171
location: region:369634-375171:1
so has part: feature:369634-375171:1:exon
subclass of: SO_0000010

116797687
type: Gene
SIO_000068: ncbigene

position:369634:1
position: 369634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375171:1
position: 375171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369634-375171:1:exon

LOC116797687
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116797687
product: 5-hydroxytryptamine receptor 3A-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032709479.1
SIO_010081: LOC116797687
subclass of: SO_0000673
so part of: LOC116797687
location: join(369634..369842,371785..371948,372089..372133,372469..372578,373158..373327,373549..373709,373955..374165,374315..374548,374714..375171)
location: region:369634-375171:1
so has part: feature:369634-369842:1:exon
so has part: feature:371785-371948:1:exon
so has part: feature:372089-372133:1:exon
so has part: feature:372469-372578:1:exon
so has part: feature:373158-373327:1:exon
so has part: feature:373549-373709:1:exon
so has part: feature:373955-374165:1:exon
so has part: feature:374315-374548:1:exon
so has part: feature:374714-375171:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:369634-369842:1:exon

position:369842:1
position: 369842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:371785-371948:1:exon

position:371785:1
position: 371785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371948:1
position: 371948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:372089-372133:1:exon

position:372089:1
position: 372089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372133:1
position: 372133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:372469-372578:1:exon

position:372469:1
position: 372469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372578:1
position: 372578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:373158-373327:1:exon

position:373158:1
position: 373158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373327:1
position: 373327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:373549-373709:1:exon

position:373549:1
position: 373549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373709:1
position: 373709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:373955-374165:1:exon

position:373955:1
position: 373955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374165:1
position: 374165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:374315-374548:1:exon

position:374315:1
position: 374315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374548:1
position: 374548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:374714-375171:1:exon

position:374714:1
position: 374714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116797687
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116797687
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: 5-hydroxytryptamine receptor 3A-like
translation: MQRKKLIARLTGRSQKPDGGGKATRLPPVSLLRSLLCRAGSSGASRAMTLTALGALLALLPLALMLQSPGTQRGGRTPEPSEPALRRLSHYLLAHYQKGTRPVRDWRTTTNVAIDLMVYAILSVDEKNQVLTTYIWYRQHWTDEFLRWDPARFDNLTQISLPVESIWVPDILINEFVDVGKSPHVPYVYVSHHGEVQNLKPIQVMTACSLDIYNFPFDVQNCSLTFTSWLHHIRDINLTLWRQPELVKFDRSVFMNQGEWELLYVLSHFQEFSVKSSDNYAEMKFYVVIRRRPLFYTVSLLLPSIFLMVMDIVGFYLPPNSGERVSFKITLLLGYSVFLIIVSDTLPATAVGTPLIGTYFVVCMALLVISLTETILIVRLVHKQDLQPHVPEWVKHLLLERATVLLCIRDRKKFSQSRTQSSDISRQAENNDSTAKLTPYGCEDPRECGAVGGTRPTLAFGSRAEGSAVLQEVLRETTAIRQFLEKREEFRDVAREWLQVGYVLDVLLFRAYLVAVLAYSITLGTLWSVWRDA
SIO_010081: LOC116797687
subclass of: SO_0000673
so part of: LOC116797687
location: join(369634..369842,371785..371948,372089..372133,372469..372578,373158..373327,373549..373709,373955..374165,374315..374548,374714..375012)
location: region:369634-375012:1
so has part: feature:369634-369842:1:exon
so has part: feature:371785-371948:1:exon
so has part: feature:372089-372133:1:exon
so has part: feature:372469-372578:1:exon
so has part: feature:373158-373327:1:exon
so has part: feature:373549-373709:1:exon
so has part: feature:373955-374165:1:exon
so has part: feature:374315-374548:1:exon
so has part: feature:374714-375012:1:exon

XP_032565370.1
type: Protein
SIO_000068: ncbiprotein

position:375012:1
position: 375012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369634-369842:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:371785-371948:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:372089-372133:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:372469-372578:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:373158-373327:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:373549-373709:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:373955-374165:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:374315-374548:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:374714-375012:1:exon

ZBTB16
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: ZBTB16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(377525..432111)
location: region:377525-432111:-1
so has part: feature:377525-432111:-1:exon
subclass of: SO_0000010

116797686
type: Gene
SIO_000068: ncbigene

position:377525:-1
position: 377525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432111:-1
position: 432111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377525-432111:-1:exon

ZBTB16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ZBTB16
product: zinc finger and BTB domain containing 16, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 long SRA read, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032709478.1
SIO_010081: ZBTB16
subclass of: SO_0000673
so part of: ZBTB16
location: complement(join(377525..380501,380773..380940,383089..383259,396921..397007,405213..405310,430001..431332,432048..432111))
location: region:377525-432111:-1
so has part: feature:432048-432111:-1:exon
so has part: feature:430001-431332:-1:exon
so has part: feature:405213-405310:-1:exon
so has part: feature:396921-397007:-1:exon
so has part: feature:383089-383259:-1:exon
so has part: feature:380773-380940:-1:exon
so has part: feature:377525-380501:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:432048-432111:-1:exon

position:432048:-1
position: 432048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:430001-431332:-1:exon

position:430001:-1
position: 430001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431332:-1
position: 431332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:405213-405310:-1:exon

position:405213:-1
position: 405213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405310:-1
position: 405310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:396921-397007:-1:exon

position:396921:-1
position: 396921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397007:-1
position: 397007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:383089-383259:-1:exon

position:383089:-1
position: 383089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383259:-1
position: 383259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:380773-380940:-1:exon

position:380773:-1
position: 380773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380940:-1
position: 380940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:377525-380501:-1:exon

position:380501:-1
position: 380501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZBTB16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ZBTB16
product: zinc finger and BTB domain containing 16, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 1 long SRA read, 17 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032709475.1
SIO_010081: ZBTB16
subclass of: SO_0000673
so part of: ZBTB16
location: complement(join(377525..380501,380773..380940,383089..383259,396921..397007,405213..405310,430001..431332,431821..431923))
location: region:377525-431923:-1
so has part: feature:431821-431923:-1:exon
so has part: feature:430001-431332:-1:exon
so has part: feature:405213-405310:-1:exon
so has part: feature:396921-397007:-1:exon
so has part: feature:383089-383259:-1:exon
so has part: feature:380773-380940:-1:exon
so has part: feature:377525-380501:-1:exon

position:431923:-1
position: 431923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431821-431923:-1:exon

position:431821:-1
position: 431821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:430001-431332:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:405213-405310:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:396921-397007:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:383089-383259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:380773-380940:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:377525-380501:-1:exon

ZBTB16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ZBTB16
product: zinc finger and BTB domain containing 16, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 long SRA read, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032709477.1
SIO_010081: ZBTB16
subclass of: SO_0000673
so part of: ZBTB16
location: complement(join(377525..380501,380773..380940,383089..383259,396921..397007,405213..405310,430001..431336,431821..431890))
location: region:377525-431890:-1
so has part: feature:431821-431890:-1:exon
so has part: feature:430001-431336:-1:exon
so has part: feature:405213-405310:-1:exon
so has part: feature:396921-397007:-1:exon
so has part: feature:383089-383259:-1:exon
so has part: feature:380773-380940:-1:exon
so has part: feature:377525-380501:-1:exon

position:431890:-1
position: 431890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431821-431890:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:430001-431336:-1:exon

position:431336:-1
position: 431336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:405213-405310:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:396921-397007:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:383089-383259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:380773-380940:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:377525-380501:-1:exon

ZBTB16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ZBTB16
product: zinc finger and BTB domain containing 16, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 long SRA read, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_032709474.1
SIO_010081: ZBTB16
subclass of: SO_0000673
so part of: ZBTB16
location: complement(join(377525..380501,380773..380940,383089..383259,396921..397007,405213..405310,430001..431603))
location: region:377525-431603:-1
so has part: feature:430001-431603:-1:exon
so has part: feature:405213-405310:-1:exon
so has part: feature:396921-397007:-1:exon
so has part: feature:383089-383259:-1:exon
so has part: feature:380773-380940:-1:exon
so has part: feature:377525-380501:-1:exon

position:431603:-1
position: 431603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430001-431603:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:405213-405310:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:396921-397007:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:383089-383259:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:380773-380940:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:377525-380501:-1:exon

ZBTB16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ZBTB16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 16
translation: MDLTKMGLIQLQNPCHPTGLLHKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRNSQHYTLDFLSPKTFQQILEYAYTATLQAKVEDLDDLLYAAEILEIEYLEEQCLKILETIQASEDNDTEVAMTDGGATAEEEEERKSRYIKGLFISKPTGEHGGYAGTTGQSLPAATAEQSHSASVSYCSLSAMSPTKAAVDSLMTIGQSLLQGALPPSAPDDSRPTTVRRPPGLAEVKTEAMQVDEASSRDSPQTAEPGASSGEKPDEKGKEGPGTPTRSSVITSARELHYAREEGTEPPPEPGQGLPLGPEPSAATPGEKPLGIYSLLPNHKTEPVLGVPPAVASALHVQPALAVSMDFSAYGGLLPQGFIQRELFSKLGELAAGMKTESRALGEQCSVCGAELPDNETLEQHRKLHSGMKTYGCELCGKRFLDSLRLRMHLLAHSAGAKALVCDQCGAQFSKEDALETHRQTHTGTDMAVFCLLCGKRFQTQSALQQHMEVHAGVRSYICSECNRTFPSHTALKRHLRSHTGDHPYECEFCGSCFRDESTLKGHKRIHTGEKPYECNGCGKKFSLKHQLETHYRVHTGEKPFECKLCHQRSRDYSAMIKHLRTHNGASPYQCTICLEYCPSLSAMQKHMKGHKPEEIPTDWRIEKTYLYLCYV
SIO_010081: ZBTB16
subclass of: SO_0000673
so part of: ZBTB16
location: complement(join(380272..380501,380773..380940,383089..383259,396921..397007,405213..405310,430001..431262))
location: region:380272-431262:-1
so has part: feature:430001-431262:-1:exon
so has part: feature:405213-405310:-1:exon
so has part: feature:396921-397007:-1:exon
so has part: feature:383089-383259:-1:exon
so has part: feature:380773-380940:-1:exon
so has part: feature:380272-380501:-1:exon

XP_032565365.1
type: Protein
SIO_000068: ncbiprotein

position:380272:-1
position: 380272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431262:-1
position: 431262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430001-431262:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:405213-405310:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:396921-397007:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:383089-383259:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:380773-380940:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:380272-380501:-1:exon

ZBTB16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ZBTB16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 16
translation: MDLTKMGLIQLQNPCHPTGLLHKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRNSQHYTLDFLSPKTFQQILEYAYTATLQAKVEDLDDLLYAAEILEIEYLEEQCLKILETIQASEDNDTEVAMTDGGATAEEEEERKSRYIKGLFISKPTGEHGGYAGTTGQSLPAATAEQSHSASVSYCSLSAMSPTKAAVDSLMTIGQSLLQGALPPSAPDDSRPTTVRRPPGLAEVKTEAMQVDEASSRDSPQTAEPGASSGEKPDEKGKEGPGTPTRSSVITSARELHYAREEGTEPPPEPGQGLPLGPEPSAATPGEKPLGIYSLLPNHKTEPVLGVPPAVASALHVQPALAVSMDFSAYGGLLPQGFIQRELFSKLGELAAGMKTESRALGEQCSVCGAELPDNETLEQHRKLHSGMKTYGCELCGKRFLDSLRLRMHLLAHSAGAKALVCDQCGAQFSKEDALETHRQTHTGTDMAVFCLLCGKRFQTQSALQQHMEVHAGVRSYICSECNRTFPSHTALKRHLRSHTGDHPYECEFCGSCFRDESTLKGHKRIHTGEKPYECNGCGKKFSLKHQLETHYRVHTGEKPFECKLCHQRSRDYSAMIKHLRTHNGASPYQCTICLEYCPSLSAMQKHMKGHKPEEIPTDWRIEKTYLYLCYV
SIO_010081: ZBTB16
subclass of: SO_0000673
so part of: ZBTB16
location: complement(join(380272..380501,380773..380940,383089..383259,396921..397007,405213..405310,430001..431262))
location: region:380272-431262:-1
so has part: feature:430001-431262:-1:exon
so has part: feature:405213-405310:-1:exon
so has part: feature:396921-397007:-1:exon
so has part: feature:383089-383259:-1:exon
so has part: feature:380773-380940:-1:exon
so has part: feature:380272-380501:-1:exon

XP_032565366.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:430001-431262:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:405213-405310:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:396921-397007:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:383089-383259:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:380773-380940:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:380272-380501:-1:exon

ZBTB16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ZBTB16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 16
translation: MDLTKMGLIQLQNPCHPTGLLHKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRNSQHYTLDFLSPKTFQQILEYAYTATLQAKVEDLDDLLYAAEILEIEYLEEQCLKILETIQASEDNDTEVAMTDGGATAEEEEERKSRYIKGLFISKPTGEHGGYAGTTGQSLPAATAEQSHSASVSYCSLSAMSPTKAAVDSLMTIGQSLLQGALPPSAPDDSRPTTVRRPPGLAEVKTEAMQVDEASSRDSPQTAEPGASSGEKPDEKGKEGPGTPTRSSVITSARELHYAREEGTEPPPEPGQGLPLGPEPSAATPGEKPLGIYSLLPNHKTEPVLGVPPAVASALHVQPALAVSMDFSAYGGLLPQGFIQRELFSKLGELAAGMKTESRALGEQCSVCGAELPDNETLEQHRKLHSGMKTYGCELCGKRFLDSLRLRMHLLAHSAGAKALVCDQCGAQFSKEDALETHRQTHTGTDMAVFCLLCGKRFQTQSALQQHMEVHAGVRSYICSECNRTFPSHTALKRHLRSHTGDHPYECEFCGSCFRDESTLKGHKRIHTGEKPYECNGCGKKFSLKHQLETHYRVHTGEKPFECKLCHQRSRDYSAMIKHLRTHNGASPYQCTICLEYCPSLSAMQKHMKGHKPEEIPTDWRIEKTYLYLCYV
SIO_010081: ZBTB16
subclass of: SO_0000673
so part of: ZBTB16
location: complement(join(380272..380501,380773..380940,383089..383259,396921..397007,405213..405310,430001..431262))
location: region:380272-431262:-1
so has part: feature:430001-431262:-1:exon
so has part: feature:405213-405310:-1:exon
so has part: feature:396921-397007:-1:exon
so has part: feature:383089-383259:-1:exon
so has part: feature:380773-380940:-1:exon
so has part: feature:380272-380501:-1:exon

XP_032565368.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:430001-431262:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:405213-405310:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:396921-397007:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:383089-383259:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:380773-380940:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:380272-380501:-1:exon

ZBTB16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ZBTB16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 16
translation: MDLTKMGLIQLQNPCHPTGLLHKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRNSQHYTLDFLSPKTFQQILEYAYTATLQAKVEDLDDLLYAAEILEIEYLEEQCLKILETIQASEDNDTEVAMTDGGATAEEEEERKSRYIKGLFISKPTGEHGGYAGTTGQSLPAATAEQSHSASVSYCSLSAMSPTKAAVDSLMTIGQSLLQGALPPSAPDDSRPTTVRRPPGLAEVKTEAMQVDEASSRDSPQTAEPGASSGEKPDEKGKEGPGTPTRSSVITSARELHYAREEGTEPPPEPGQGLPLGPEPSAATPGEKPLGIYSLLPNHKTEPVLGVPPAVASALHVQPALAVSMDFSAYGGLLPQGFIQRELFSKLGELAAGMKTESRALGEQCSVCGAELPDNETLEQHRKLHSGMKTYGCELCGKRFLDSLRLRMHLLAHSAGAKALVCDQCGAQFSKEDALETHRQTHTGTDMAVFCLLCGKRFQTQSALQQHMEVHAGVRSYICSECNRTFPSHTALKRHLRSHTGDHPYECEFCGSCFRDESTLKGHKRIHTGEKPYECNGCGKKFSLKHQLETHYRVHTGEKPFECKLCHQRSRDYSAMIKHLRTHNGASPYQCTICLEYCPSLSAMQKHMKGHKPEEIPTDWRIEKTYLYLCYV
SIO_010081: ZBTB16
subclass of: SO_0000673
so part of: ZBTB16
location: complement(join(380272..380501,380773..380940,383089..383259,396921..397007,405213..405310,430001..431262))
location: region:380272-431262:-1
so has part: feature:430001-431262:-1:exon
so has part: feature:405213-405310:-1:exon
so has part: feature:396921-397007:-1:exon
so has part: feature:383089-383259:-1:exon
so has part: feature:380773-380940:-1:exon
so has part: feature:380272-380501:-1:exon

XP_032565369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:430001-431262:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:405213-405310:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:396921-397007:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:383089-383259:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:380773-380940:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:380272-380501:-1:exon

NNMT
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: NNMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 449613..453110
location: region:449613-453110:1
so has part: feature:449613-453110:1:exon
subclass of: SO_0000010

116797847
type: Gene
SIO_000068: ncbigene

position:449613:1
position: 449613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453110:1
position: 453110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449613-453110:1:exon

NNMT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: NNMT
product: nicotinamide N-methyltransferase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_032709717.1
SIO_010081: NNMT
subclass of: SO_0000673
so part of: NNMT
location: join(449613..449839,450322..450529,450628..451167)
location: region:449613-451167:1
so has part: feature:449613-449839:1:exon
so has part: feature:450322-450529:1:exon
so has part: feature:450628-451167:1:exon

position:451167:1
position: 451167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449613-449839:1:exon

position:449839:1
position: 449839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:450322-450529:1:exon

position:450322:1
position: 450322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450529:1
position: 450529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:450628-451167:1:exon

position:450628:1
position: 450628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NNMT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: NNMT
product: nicotinamide N-methyltransferase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032709718.1
SIO_010081: NNMT
subclass of: SO_0000673
so part of: NNMT
location: join(449614..449839,450322..450529,450628..450988,452252..453110)
location: region:449614-453110:1
so has part: feature:449614-449839:1:exon
so has part: feature:450322-450529:1:exon
so has part: feature:450628-450988:1:exon
so has part: feature:452252-453110:1:exon

position:449614:1
position: 449614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449614-449839:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:450322-450529:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450628-450988:1:exon

position:450988:1
position: 450988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:452252-453110:1:exon

position:452252:1
position: 452252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NNMT
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 296741
gene: NNMT
product: nicotinamide N-methyltransferase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004360763.1
SIO_010081: NNMT
so part of: NNMT
location: join(449614..449839,450322..450529,450628..450988,452252..452415,452498..453106)
location: region:449614-453106:1
so has part: feature:449614-449839:1:exon
so has part: feature:450322-450529:1:exon
so has part: feature:450628-450988:1:exon
so has part: feature:452252-452415:1:exon
so has part: feature:452498-453106:1:exon

position:453106:1
position: 453106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449614-449839:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:450322-450529:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450628-450988:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:452252-452415:1:exon

position:452415:1
position: 452415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:452498-453106:1:exon

position:452498:1
position: 452498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NNMT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: NNMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nicotinamide N-methyltransferase isoform X2
translation: MDAPAIFTEADFYQQNFDPQAYLKEYYSMSDGQEGANVFLTQNLKSLHKMFSLDGLRGGTLIDVGCGPTIYQLLSACERFQEIIALDYTDQNRRELERWLRNEEGAFDWVPVVKYVCELEGDREKWAEKQEKVRKKVKQVLKCDVTRANPTGAVSLPPADCIVSTLCLEGACKDLPTFRSALRNIGTLVKPGGHLVLVTVLGETYYAFNKQVFSCLRLEKHEVEAAVEAAGFEVTFSEAQPYAA
SIO_010081: NNMT
subclass of: SO_0000673
so part of: NNMT
location: join(449680..449839,450322..450529,450628..450988,452252..452257)
location: region:449680-452257:1
so has part: feature:449680-449839:1:exon
so has part: feature:450322-450529:1:exon
so has part: feature:450628-450988:1:exon
so has part: feature:452252-452257:1:exon

XP_032565609.1
type: Protein
SIO_000068: ncbiprotein

position:449680:1
position: 449680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452257:1
position: 452257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449680-449839:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:450322-450529:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450628-450988:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:452252-452257:1:exon

NNMT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: NNMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nicotinamide N-methyltransferase isoform X1
translation: MDAPAIFTEADFYQQNFDPQAYLKEYYSMSDGQEGANVFLTQNLKSLHKMFSLDGLRGGTLIDVGCGPTIYQLLSACERFQEIIALDYTDQNRRELERWLRNEEGAFDWVPVVKYVCELEGDREKWAEKQEKVRKKVKQVLKCDVTRANPTGAVSLPPADCIVSTLCLEGACKDLPTFRSALRNIGTLVKPGGHLVLVTVLGETYYAFNKQVFSCLRLEKHEVEAAVEAAGFEVTFSEAQPYAVSEERTDCQGTLGLVARRRPSV
SIO_010081: NNMT
subclass of: SO_0000673
so part of: NNMT
location: join(449680..449839,450322..450529,450628..451057)
location: region:449680-451057:1
so has part: feature:449680-449839:1:exon
so has part: feature:450322-450529:1:exon
so has part: feature:450628-451057:1:exon

XP_032565608.1
type: Protein
SIO_000068: ncbiprotein

position:451057:1
position: 451057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449680-449839:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:450322-450529:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450628-451057:1:exon

RBM7
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: RBM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 453384..456099
location: region:453384-456099:1
so has part: feature:453384-456099:1:exon
subclass of: SO_0000010

116797714
type: Gene
SIO_000068: ncbigene

position:453384:1
position: 453384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456099:1
position: 456099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453384-456099:1:exon

RBM7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: RBM7
product: RNA binding motif protein 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 long SRA reads, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032709520.1
SIO_010081: RBM7
subclass of: SO_0000673
so part of: RBM7
location: join(453384..453541,453720..453882,454395..454497,454687..454753,455129..456099)
location: region:453384-456099:1
so has part: feature:453384-453541:1:exon
so has part: feature:453720-453882:1:exon
so has part: feature:454395-454497:1:exon
so has part: feature:454687-454753:1:exon
so has part: feature:455129-456099:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:453384-453541:1:exon

position:453541:1
position: 453541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:453720-453882:1:exon

position:453720:1
position: 453720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453882:1
position: 453882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:454395-454497:1:exon

position:454395:1
position: 454395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454497:1
position: 454497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:454687-454753:1:exon

position:454687:1
position: 454687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454753:1
position: 454753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:455129-456099:1:exon

position:455129:1
position: 455129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RBM7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: RBM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 7
translation: MGAAAAEANRTLFVGNLDPKVTEEIIFELFHQAGPVITVKIPKDRDGRPKQFAFVNFKHEVSVPYGLQLLNGIKLYGRPMRIQFRSGSSHAAQDTSLSCSPLGAAGTIPPGMPHLASNCSRYERVTEGMASMGFPPSLQRQAVMNSMARQQPQFGSKYEQPSFAPPAYPHAFHAPPPGSPLPRRPEGPVLRKGRLAAHPYPPDSRHFGRERFGPDYGRGKRDDYGFDERGHDAEHHYRGGRDEPYNDRHRDGWSHDYDHRRESYREAKWHPSRH
SIO_010081: RBM7
subclass of: SO_0000673
so part of: RBM7
location: join(453446..453541,453720..453882,454395..454497,454687..454753,455129..455524)
location: region:453446-455524:1
so has part: feature:453446-453541:1:exon
so has part: feature:453720-453882:1:exon
so has part: feature:454395-454497:1:exon
so has part: feature:454687-454753:1:exon
so has part: feature:455129-455524:1:exon

XP_032565411.1
type: Protein
SIO_000068: ncbiprotein

position:453446:1
position: 453446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455524:1
position: 455524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453446-453541:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:453720-453882:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:454395-454497:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:454687-454753:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:455129-455524:1:exon

REXO2
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: REXO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 456380..460797
location: region:456380-460797:1
so has part: feature:456380-460797:1:exon
subclass of: SO_0000010

116797833
type: Gene
SIO_000068: ncbigene

position:456380:1
position: 456380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460797:1
position: 460797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456380-460797:1:exon

REXO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: REXO2
product: RNA exonuclease 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 16 ESTs, 7 long SRA reads, 5 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_032709692.1
SIO_010081: REXO2
subclass of: SO_0000673
so part of: REXO2
location: join(456380..456512,456614..456697,456934..457011,458902..459013,459556..459664,459880..459933,460378..460797)
location: region:456380-460797:1
so has part: feature:456380-456512:1:exon
so has part: feature:456614-456697:1:exon
so has part: feature:456934-457011:1:exon
so has part: feature:458902-459013:1:exon
so has part: feature:459556-459664:1:exon
so has part: feature:459880-459933:1:exon
so has part: feature:460378-460797:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:456380-456512:1:exon

position:456512:1
position: 456512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:456614-456697:1:exon

position:456614:1
position: 456614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456697:1
position: 456697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:456934-457011:1:exon

position:456934:1
position: 456934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457011:1
position: 457011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:458902-459013:1:exon

position:458902:1
position: 458902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459013:1
position: 459013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:459556-459664:1:exon

position:459556:1
position: 459556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459664:1
position: 459664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:459880-459933:1:exon

position:459880:1
position: 459880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459933:1
position: 459933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:460378-460797:1:exon

position:460378:1
position: 460378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

REXO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: REXO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oligoribonuclease, mitochondrial
translation: MLGGGRAGLGRLRSCAGRLWRGRRRAAAMAGGDMGQRMVWVDLEMTGLDVEKDQILEMACLITDCDLNVLAEGPNLIINQPDELLESMSEWCKEHHGKSGLTKAVKESKISLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKYMPQFMRHLHYRIVDVSTVKELCRRWYPEEYEFAPKKAASHRALDDIRESIKELQFYRDHIFKRKTDEKKRKLIENGESDKAAS
SIO_010081: REXO2
subclass of: SO_0000673
so part of: REXO2
location: join(456381..456512,456614..456697,456934..457011,458902..459013,459556..459664,459880..459933,460378..460507)
location: region:456381-460507:1
so has part: feature:456381-456512:1:exon
so has part: feature:456614-456697:1:exon
so has part: feature:456934-457011:1:exon
so has part: feature:458902-459013:1:exon
so has part: feature:459556-459664:1:exon
so has part: feature:459880-459933:1:exon
so has part: feature:460378-460507:1:exon

XP_032565583.1
type: Protein
SIO_000068: ncbiprotein

position:456381:1
position: 456381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460507:1
position: 460507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456381-456512:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:456614-456697:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:456934-457011:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:458902-459013:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:459556-459664:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:459880-459933:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:460378-460507:1:exon

CADM1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: CADM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(525202..663538)
location: region:525202-663538:-1
so has part: feature:525202-663538:-1:exon
subclass of: SO_0000010

116797634
type: Gene
SIO_000068: ncbigene

position:525202:-1
position: 525202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663538:-1
position: 663538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525202-663538:-1:exon

CADM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: CADM1
product: cell adhesion molecule 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_032709351.1
SIO_010081: CADM1
subclass of: SO_0000673
so part of: CADM1
location: complement(join(525202..527383,527575..527706,553482..553654,556601..556700,564618..564773,566456..566593,568990..569142,570223..570369,663413..663538))
location: region:525202-663538:-1
so has part: feature:663413-663538:-1:exon
so has part: feature:570223-570369:-1:exon
so has part: feature:568990-569142:-1:exon
so has part: feature:566456-566593:-1:exon
so has part: feature:564618-564773:-1:exon
so has part: feature:556601-556700:-1:exon
so has part: feature:553482-553654:-1:exon
so has part: feature:527575-527706:-1:exon
so has part: feature:525202-527383:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:663413-663538:-1:exon

position:663413:-1
position: 663413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:570223-570369:-1:exon

position:570223:-1
position: 570223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:570369:-1
position: 570369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:568990-569142:-1:exon

position:568990:-1
position: 568990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569142:-1
position: 569142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:566456-566593:-1:exon

position:566456:-1
position: 566456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:566593:-1
position: 566593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:564618-564773:-1:exon

position:564618:-1
position: 564618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564773:-1
position: 564773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:556601-556700:-1:exon

position:556601:-1
position: 556601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556700:-1
position: 556700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:553482-553654:-1:exon

position:553482:-1
position: 553482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553654:-1
position: 553654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:527575-527706:-1:exon

position:527575:-1
position: 527575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527706:-1
position: 527706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:525202-527383:-1:exon

position:527383:-1
position: 527383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CADM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: CADM1
product: cell adhesion molecule 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032709350.1
SIO_010081: CADM1
subclass of: SO_0000673
so part of: CADM1
location: complement(join(525202..527383,527575..527706,541276..541308,553482..553654,556601..556700,564618..564773,566456..566593,568990..569142,570223..570369,663413..663538))
location: region:525202-663538:-1
so has part: feature:663413-663538:-1:exon
so has part: feature:570223-570369:-1:exon
so has part: feature:568990-569142:-1:exon
so has part: feature:566456-566593:-1:exon
so has part: feature:564618-564773:-1:exon
so has part: feature:556601-556700:-1:exon
so has part: feature:553482-553654:-1:exon
so has part: feature:541276-541308:-1:exon
so has part: feature:527575-527706:-1:exon
so has part: feature:525202-527383:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:663413-663538:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:570223-570369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568990-569142:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:566456-566593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:564618-564773:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:556601-556700:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553482-553654:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:541276-541308:-1:exon

position:541276:-1
position: 541276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541308:-1
position: 541308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:527575-527706:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:525202-527383:-1:exon

CADM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: CADM1
product: cell adhesion molecule 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032709348.1
SIO_010081: CADM1
subclass of: SO_0000673
so part of: CADM1
location: complement(join(525202..527383,527575..527706,536098..536151,541276..541308,553482..553654,556601..556700,564618..564773,566456..566593,568990..569142,570223..570369,663413..663538))
location: region:525202-663538:-1
so has part: feature:663413-663538:-1:exon
so has part: feature:570223-570369:-1:exon
so has part: feature:568990-569142:-1:exon
so has part: feature:566456-566593:-1:exon
so has part: feature:564618-564773:-1:exon
so has part: feature:556601-556700:-1:exon
so has part: feature:553482-553654:-1:exon
so has part: feature:541276-541308:-1:exon
so has part: feature:536098-536151:-1:exon
so has part: feature:527575-527706:-1:exon
so has part: feature:525202-527383:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:663413-663538:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:570223-570369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568990-569142:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:566456-566593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:564618-564773:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:556601-556700:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553482-553654:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:541276-541308:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:536098-536151:-1:exon

position:536098:-1
position: 536098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536151:-1
position: 536151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:527575-527706:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:525202-527383:-1:exon

CADM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: CADM1
product: cell adhesion molecule 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032709344.1
SIO_010081: CADM1
subclass of: SO_0000673
so part of: CADM1
location: complement(join(525202..527383,527575..527706,534081..534161,536098..536151,541276..541308,553482..553654,556601..556700,564618..564773,566456..566593,568990..569142,570223..570369,663413..663538))
location: region:525202-663538:-1
so has part: feature:663413-663538:-1:exon
so has part: feature:570223-570369:-1:exon
so has part: feature:568990-569142:-1:exon
so has part: feature:566456-566593:-1:exon
so has part: feature:564618-564773:-1:exon
so has part: feature:556601-556700:-1:exon
so has part: feature:553482-553654:-1:exon
so has part: feature:541276-541308:-1:exon
so has part: feature:536098-536151:-1:exon
so has part: feature:534081-534161:-1:exon
so has part: feature:527575-527706:-1:exon
so has part: feature:525202-527383:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:663413-663538:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:570223-570369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568990-569142:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:566456-566593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:564618-564773:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:556601-556700:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553482-553654:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:541276-541308:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:536098-536151:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534081-534161:-1:exon

position:534081:-1
position: 534081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534161:-1
position: 534161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:527575-527706:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:525202-527383:-1:exon

CADM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: CADM1
product: cell adhesion molecule 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_032709349.1
SIO_010081: CADM1
subclass of: SO_0000673
so part of: CADM1
location: complement(join(525202..527383,527575..527706,549601..549672,553482..553654,556601..556700,564618..564773,566456..566593,568990..569142,570223..570369,663413..663538))
location: region:525202-663538:-1
so has part: feature:663413-663538:-1:exon
so has part: feature:570223-570369:-1:exon
so has part: feature:568990-569142:-1:exon
so has part: feature:566456-566593:-1:exon
so has part: feature:564618-564773:-1:exon
so has part: feature:556601-556700:-1:exon
so has part: feature:553482-553654:-1:exon
so has part: feature:549601-549672:-1:exon
so has part: feature:527575-527706:-1:exon
so has part: feature:525202-527383:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:663413-663538:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:570223-570369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568990-569142:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:566456-566593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:564618-564773:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:556601-556700:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553482-553654:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:549601-549672:-1:exon

position:549601:-1
position: 549601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549672:-1
position: 549672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:527575-527706:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:525202-527383:-1:exon

CADM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: CADM1
product: cell adhesion molecule 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032709346.1
SIO_010081: CADM1
subclass of: SO_0000673
so part of: CADM1
location: complement(join(525202..527383,527575..527706,534081..534161,549601..549672,553482..553654,556601..556700,564618..564773,566456..566593,568990..569142,570223..570369,663413..663538))
location: region:525202-663538:-1
so has part: feature:663413-663538:-1:exon
so has part: feature:570223-570369:-1:exon
so has part: feature:568990-569142:-1:exon
so has part: feature:566456-566593:-1:exon
so has part: feature:564618-564773:-1:exon
so has part: feature:556601-556700:-1:exon
so has part: feature:553482-553654:-1:exon
so has part: feature:549601-549672:-1:exon
so has part: feature:534081-534161:-1:exon
so has part: feature:527575-527706:-1:exon
so has part: feature:525202-527383:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:663413-663538:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:570223-570369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568990-569142:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:566456-566593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:564618-564773:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:556601-556700:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553482-553654:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:549601-549672:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534081-534161:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:527575-527706:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:525202-527383:-1:exon

CADM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: CADM1
product: cell adhesion molecule 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032709347.1
SIO_010081: CADM1
subclass of: SO_0000673
so part of: CADM1
location: complement(join(525202..527383,527575..527706,541276..541308,549601..549672,553482..553654,556601..556700,564618..564773,566456..566593,568990..569142,570223..570369,663413..663538))
location: region:525202-663538:-1
so has part: feature:663413-663538:-1:exon
so has part: feature:570223-570369:-1:exon
so has part: feature:568990-569142:-1:exon
so has part: feature:566456-566593:-1:exon
so has part: feature:564618-564773:-1:exon
so has part: feature:556601-556700:-1:exon
so has part: feature:553482-553654:-1:exon
so has part: feature:549601-549672:-1:exon
so has part: feature:541276-541308:-1:exon
so has part: feature:527575-527706:-1:exon
so has part: feature:525202-527383:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:663413-663538:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:570223-570369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568990-569142:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:566456-566593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:564618-564773:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:556601-556700:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553482-553654:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:549601-549672:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:541276-541308:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:527575-527706:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:525202-527383:-1:exon

CADM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: CADM1
product: cell adhesion molecule 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_032709345.1
SIO_010081: CADM1
subclass of: SO_0000673
so part of: CADM1
location: complement(join(525202..527383,527575..527706,536098..536151,541276..541308,549601..549672,553482..553654,556601..556700,564618..564773,566456..566593,568990..569142,570223..570369,663413..663538))
location: region:525202-663538:-1
so has part: feature:663413-663538:-1:exon
so has part: feature:570223-570369:-1:exon
so has part: feature:568990-569142:-1:exon
so has part: feature:566456-566593:-1:exon
so has part: feature:564618-564773:-1:exon
so has part: feature:556601-556700:-1:exon
so has part: feature:553482-553654:-1:exon
so has part: feature:549601-549672:-1:exon
so has part: feature:541276-541308:-1:exon
so has part: feature:536098-536151:-1:exon
so has part: feature:527575-527706:-1:exon
so has part: feature:525202-527383:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:663413-663538:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:570223-570369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568990-569142:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:566456-566593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:564618-564773:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:556601-556700:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553482-553654:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:549601-549672:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:541276-541308:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:536098-536151:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:527575-527706:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:525202-527383:-1:exon

CADM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: CADM1
product: cell adhesion molecule 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032709343.1
SIO_010081: CADM1
subclass of: SO_0000673
so part of: CADM1
location: complement(join(525202..527383,527575..527706,534081..534161,536098..536151,541276..541308,549601..549672,553482..553654,556601..556700,564618..564773,566456..566593,568990..569142,570223..570369,663413..663538))
location: region:525202-663538:-1
so has part: feature:663413-663538:-1:exon
so has part: feature:570223-570369:-1:exon
so has part: feature:568990-569142:-1:exon
so has part: feature:566456-566593:-1:exon
so has part: feature:564618-564773:-1:exon
so has part: feature:556601-556700:-1:exon
so has part: feature:553482-553654:-1:exon
so has part: feature:549601-549672:-1:exon
so has part: feature:541276-541308:-1:exon
so has part: feature:536098-536151:-1:exon
so has part: feature:534081-534161:-1:exon
so has part: feature:527575-527706:-1:exon
so has part: feature:525202-527383:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:663413-663538:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:570223-570369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568990-569142:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:566456-566593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:564618-564773:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:556601-556700:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553482-553654:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:549601-549672:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:541276-541308:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:536098-536151:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:534081-534161:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:527575-527706:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:525202-527383:-1:exon

CADM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: CADM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule 1 isoform X9
translation: MAGRAQPSGPAGSGGGAPGLLPLLLLLLSAAAIIPRGDGQNLVTEDVTVVEGDVATISCRVKNSDDSVIQLLNPNRQTIYFRDFRPLKDSRFQLVNFSNSELRVSLTNVSISDEGRYFCQLYTDPPQEIYTTITVLVPPRNLVIDIQKETAVEGEEIELNCTAMASRPATTIRWFKGNKELTGKSEVEQWSDMYTVTSQLLLKVGREDDGVPVICLVDHPAVKDLQTQRYLEVMYKPQVRVSQNYPLQGLTREGEPLELTCTAFGKPQPTDMRWLRVDDEMPQHVVVSGSNLLISNLNKTDNGTYRCEASNAVGKSHADYMLFVYDSRAGEEGAIRSVDHAVVGGVVAVVVFAMLCLLIILGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGQNNSEEKKEYFI
SIO_010081: CADM1
subclass of: SO_0000673
so part of: CADM1
location: complement(join(527265..527383,527575..527706,553482..553654,556601..556700,564618..564773,566456..566593,568990..569142,570223..570369,663413..663521))
location: region:527265-663521:-1
so has part: feature:663413-663521:-1:exon
so has part: feature:570223-570369:-1:exon
so has part: feature:568990-569142:-1:exon
so has part: feature:566456-566593:-1:exon
so has part: feature:564618-564773:-1:exon
so has part: feature:556601-556700:-1:exon
so has part: feature:553482-553654:-1:exon
so has part: feature:527575-527706:-1:exon
so has part: feature:527265-527383:-1:exon

XP_032565242.1
type: Protein
SIO_000068: ncbiprotein

position:527265:-1
position: 527265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663521:-1
position: 663521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:663413-663521:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:570223-570369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568990-569142:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:566456-566593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:564618-564773:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:556601-556700:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553482-553654:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:527575-527706:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:527265-527383:-1:exon

CADM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: CADM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule 1 isoform X8
translation: MAGRAQPSGPAGSGGGAPGLLPLLLLLLSAAAIIPRGDGQNLVTEDVTVVEGDVATISCRVKNSDDSVIQLLNPNRQTIYFRDFRPLKDSRFQLVNFSNSELRVSLTNVSISDEGRYFCQLYTDPPQEIYTTITVLVPPRNLVIDIQKETAVEGEEIELNCTAMASRPATTIRWFKGNKELTGKSEVEQWSDMYTVTSQLLLKVGREDDGVPVICLVDHPAVKDLQTQRYLEVMYKPQVRVSQNYPLQGLTREGEPLELTCTAFGKPQPTDMRWLRVDDEMPQHVVVSGSNLLISNLNKTDNGTYRCEASNAVGKSHADYMLFVYDTTATTEPAVHDSRAGEEGAIRSVDHAVVGGVVAVVVFAMLCLLIILGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGQNNSEEKKEYFI
SIO_010081: CADM1
subclass of: SO_0000673
so part of: CADM1
location: complement(join(527265..527383,527575..527706,541276..541308,553482..553654,556601..556700,564618..564773,566456..566593,568990..569142,570223..570369,663413..663521))
location: region:527265-663521:-1
so has part: feature:663413-663521:-1:exon
so has part: feature:570223-570369:-1:exon
so has part: feature:568990-569142:-1:exon
so has part: feature:566456-566593:-1:exon
so has part: feature:564618-564773:-1:exon
so has part: feature:556601-556700:-1:exon
so has part: feature:553482-553654:-1:exon
so has part: feature:541276-541308:-1:exon
so has part: feature:527575-527706:-1:exon
so has part: feature:527265-527383:-1:exon

XP_032565241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:663413-663521:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:570223-570369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568990-569142:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:566456-566593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:564618-564773:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:556601-556700:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553482-553654:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:541276-541308:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:527575-527706:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:527265-527383:-1:exon

CADM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: CADM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule 1 isoform X6
translation: MAGRAQPSGPAGSGGGAPGLLPLLLLLLSAAAIIPRGDGQNLVTEDVTVVEGDVATISCRVKNSDDSVIQLLNPNRQTIYFRDFRPLKDSRFQLVNFSNSELRVSLTNVSISDEGRYFCQLYTDPPQEIYTTITVLVPPRNLVIDIQKETAVEGEEIELNCTAMASRPATTIRWFKGNKELTGKSEVEQWSDMYTVTSQLLLKVGREDDGVPVICLVDHPAVKDLQTQRYLEVMYKPQVRVSQNYPLQGLTREGEPLELTCTAFGKPQPTDMRWLRVDDEMPQHVVVSGSNLLISNLNKTDNGTYRCEASNAVGKSHADYMLFVYDTTATTEPAVHGFTQLPNSAEELDYGDLSDSRAGEEGAIRSVDHAVVGGVVAVVVFAMLCLLIILGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGQNNSEEKKEYFI
SIO_010081: CADM1
subclass of: SO_0000673
so part of: CADM1
location: complement(join(527265..527383,527575..527706,536098..536151,541276..541308,553482..553654,556601..556700,564618..564773,566456..566593,568990..569142,570223..570369,663413..663521))
location: region:527265-663521:-1
so has part: feature:663413-663521:-1:exon
so has part: feature:570223-570369:-1:exon
so has part: feature:568990-569142:-1:exon
so has part: feature:566456-566593:-1:exon
so has part: feature:564618-564773:-1:exon
so has part: feature:556601-556700:-1:exon
so has part: feature:553482-553654:-1:exon
so has part: feature:541276-541308:-1:exon
so has part: feature:536098-536151:-1:exon
so has part: feature:527575-527706:-1:exon
so has part: feature:527265-527383:-1:exon

XP_032565239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:663413-663521:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:570223-570369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568990-569142:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:566456-566593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:564618-564773:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:556601-556700:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553482-553654:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:541276-541308:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:536098-536151:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:527575-527706:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:527265-527383:-1:exon

CADM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: CADM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule 1 isoform X2
translation: MAGRAQPSGPAGSGGGAPGLLPLLLLLLSAAAIIPRGDGQNLVTEDVTVVEGDVATISCRVKNSDDSVIQLLNPNRQTIYFRDFRPLKDSRFQLVNFSNSELRVSLTNVSISDEGRYFCQLYTDPPQEIYTTITVLVPPRNLVIDIQKETAVEGEEIELNCTAMASRPATTIRWFKGNKELTGKSEVEQWSDMYTVTSQLLLKVGREDDGVPVICLVDHPAVKDLQTQRYLEVMYKPQVRVSQNYPLQGLTREGEPLELTCTAFGKPQPTDMRWLRVDDEMPQHVVVSGSNLLISNLNKTDNGTYRCEASNAVGKSHADYMLFVYDTTATTEPAVHGFTQLPNSAEELDYGDLSGTPVPLTASTEALPTVQLSNASLAFQPDSRAGEEGAIRSVDHAVVGGVVAVVVFAMLCLLIILGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGQNNSEEKKEYFI
SIO_010081: CADM1
subclass of: SO_0000673
so part of: CADM1
location: complement(join(527265..527383,527575..527706,534081..534161,536098..536151,541276..541308,553482..553654,556601..556700,564618..564773,566456..566593,568990..569142,570223..570369,663413..663521))
location: region:527265-663521:-1
so has part: feature:663413-663521:-1:exon
so has part: feature:570223-570369:-1:exon
so has part: feature:568990-569142:-1:exon
so has part: feature:566456-566593:-1:exon
so has part: feature:564618-564773:-1:exon
so has part: feature:556601-556700:-1:exon
so has part: feature:553482-553654:-1:exon
so has part: feature:541276-541308:-1:exon
so has part: feature:536098-536151:-1:exon
so has part: feature:534081-534161:-1:exon
so has part: feature:527575-527706:-1:exon
so has part: feature:527265-527383:-1:exon

XP_032565235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:663413-663521:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:570223-570369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568990-569142:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:566456-566593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:564618-564773:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:556601-556700:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553482-553654:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:541276-541308:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:536098-536151:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534081-534161:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:527575-527706:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:527265-527383:-1:exon

CADM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: CADM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule 1 isoform X7
translation: MAGRAQPSGPAGSGGGAPGLLPLLLLLLSAAAIIPRGDGQNLVTEDVTVVEGDVATISCRVKNSDDSVIQLLNPNRQTIYFRDFRPLKDSRFQLVNFSNSELRVSLTNVSISDEGRYFCQLYTDPPQEIYTTITVLVPPRNLVIDIQKETAVEGEEIELNCTAMASRPATTIRWFKGNKELTGKSEVEQWSDMYTVTSQLLLKVGREDDGVPVICLVDHPAVKDLQTQRYLEVMYKPQVRVSQNYPLQGLTREGEPLELTCTAFGKPQPTDMRWLRVDDEMPQHVVVSGSNLLISNLNKTDNGTYRCEASNAVGKSHADYMLFVYDPPTTIPPPTTTTTTTTTIPTTITDSRAGEEGAIRSVDHAVVGGVVAVVVFAMLCLLIILGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGQNNSEEKKEYFI
SIO_010081: CADM1
subclass of: SO_0000673
so part of: CADM1
location: complement(join(527265..527383,527575..527706,549601..549672,553482..553654,556601..556700,564618..564773,566456..566593,568990..569142,570223..570369,663413..663521))
location: region:527265-663521:-1
so has part: feature:663413-663521:-1:exon
so has part: feature:570223-570369:-1:exon
so has part: feature:568990-569142:-1:exon
so has part: feature:566456-566593:-1:exon
so has part: feature:564618-564773:-1:exon
so has part: feature:556601-556700:-1:exon
so has part: feature:553482-553654:-1:exon
so has part: feature:549601-549672:-1:exon
so has part: feature:527575-527706:-1:exon
so has part: feature:527265-527383:-1:exon

XP_032565240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:663413-663521:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:570223-570369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568990-569142:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:566456-566593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:564618-564773:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:556601-556700:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553482-553654:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:549601-549672:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:527575-527706:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:527265-527383:-1:exon

CADM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: CADM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule 1 isoform X4
translation: MAGRAQPSGPAGSGGGAPGLLPLLLLLLSAAAIIPRGDGQNLVTEDVTVVEGDVATISCRVKNSDDSVIQLLNPNRQTIYFRDFRPLKDSRFQLVNFSNSELRVSLTNVSISDEGRYFCQLYTDPPQEIYTTITVLVPPRNLVIDIQKETAVEGEEIELNCTAMASRPATTIRWFKGNKELTGKSEVEQWSDMYTVTSQLLLKVGREDDGVPVICLVDHPAVKDLQTQRYLEVMYKPQVRVSQNYPLQGLTREGEPLELTCTAFGKPQPTDMRWLRVDDEMPQHVVVSGSNLLISNLNKTDNGTYRCEASNAVGKSHADYMLFVYDPPTTIPPPTTTTTTTTTIPTTITGTPVPLTASTEALPTVQLSNASLAFQPDSRAGEEGAIRSVDHAVVGGVVAVVVFAMLCLLIILGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGQNNSEEKKEYFI
SIO_010081: CADM1
subclass of: SO_0000673
so part of: CADM1
location: complement(join(527265..527383,527575..527706,534081..534161,549601..549672,553482..553654,556601..556700,564618..564773,566456..566593,568990..569142,570223..570369,663413..663521))
location: region:527265-663521:-1
so has part: feature:663413-663521:-1:exon
so has part: feature:570223-570369:-1:exon
so has part: feature:568990-569142:-1:exon
so has part: feature:566456-566593:-1:exon
so has part: feature:564618-564773:-1:exon
so has part: feature:556601-556700:-1:exon
so has part: feature:553482-553654:-1:exon
so has part: feature:549601-549672:-1:exon
so has part: feature:534081-534161:-1:exon
so has part: feature:527575-527706:-1:exon
so has part: feature:527265-527383:-1:exon

XP_032565237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:663413-663521:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:570223-570369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568990-569142:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:566456-566593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:564618-564773:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:556601-556700:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553482-553654:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:549601-549672:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534081-534161:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:527575-527706:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:527265-527383:-1:exon

CADM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: CADM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule 1 isoform X5
translation: MAGRAQPSGPAGSGGGAPGLLPLLLLLLSAAAIIPRGDGQNLVTEDVTVVEGDVATISCRVKNSDDSVIQLLNPNRQTIYFRDFRPLKDSRFQLVNFSNSELRVSLTNVSISDEGRYFCQLYTDPPQEIYTTITVLVPPRNLVIDIQKETAVEGEEIELNCTAMASRPATTIRWFKGNKELTGKSEVEQWSDMYTVTSQLLLKVGREDDGVPVICLVDHPAVKDLQTQRYLEVMYKPQVRVSQNYPLQGLTREGEPLELTCTAFGKPQPTDMRWLRVDDEMPQHVVVSGSNLLISNLNKTDNGTYRCEASNAVGKSHADYMLFVYDPPTTIPPPTTTTTTTTTIPTTITDTTATTEPAVHDSRAGEEGAIRSVDHAVVGGVVAVVVFAMLCLLIILGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGQNNSEEKKEYFI
SIO_010081: CADM1
subclass of: SO_0000673
so part of: CADM1
location: complement(join(527265..527383,527575..527706,541276..541308,549601..549672,553482..553654,556601..556700,564618..564773,566456..566593,568990..569142,570223..570369,663413..663521))
location: region:527265-663521:-1
so has part: feature:663413-663521:-1:exon
so has part: feature:570223-570369:-1:exon
so has part: feature:568990-569142:-1:exon
so has part: feature:566456-566593:-1:exon
so has part: feature:564618-564773:-1:exon
so has part: feature:556601-556700:-1:exon
so has part: feature:553482-553654:-1:exon
so has part: feature:549601-549672:-1:exon
so has part: feature:541276-541308:-1:exon
so has part: feature:527575-527706:-1:exon
so has part: feature:527265-527383:-1:exon

XP_032565238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:663413-663521:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:570223-570369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568990-569142:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:566456-566593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:564618-564773:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:556601-556700:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553482-553654:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:549601-549672:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:541276-541308:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:527575-527706:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:527265-527383:-1:exon

CADM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: CADM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule 1 isoform X3
translation: MAGRAQPSGPAGSGGGAPGLLPLLLLLLSAAAIIPRGDGQNLVTEDVTVVEGDVATISCRVKNSDDSVIQLLNPNRQTIYFRDFRPLKDSRFQLVNFSNSELRVSLTNVSISDEGRYFCQLYTDPPQEIYTTITVLVPPRNLVIDIQKETAVEGEEIELNCTAMASRPATTIRWFKGNKELTGKSEVEQWSDMYTVTSQLLLKVGREDDGVPVICLVDHPAVKDLQTQRYLEVMYKPQVRVSQNYPLQGLTREGEPLELTCTAFGKPQPTDMRWLRVDDEMPQHVVVSGSNLLISNLNKTDNGTYRCEASNAVGKSHADYMLFVYDPPTTIPPPTTTTTTTTTIPTTITDTTATTEPAVHGFTQLPNSAEELDYGDLSDSRAGEEGAIRSVDHAVVGGVVAVVVFAMLCLLIILGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGQNNSEEKKEYFI
SIO_010081: CADM1
subclass of: SO_0000673
so part of: CADM1
location: complement(join(527265..527383,527575..527706,536098..536151,541276..541308,549601..549672,553482..553654,556601..556700,564618..564773,566456..566593,568990..569142,570223..570369,663413..663521))
location: region:527265-663521:-1
so has part: feature:663413-663521:-1:exon
so has part: feature:570223-570369:-1:exon
so has part: feature:568990-569142:-1:exon
so has part: feature:566456-566593:-1:exon
so has part: feature:564618-564773:-1:exon
so has part: feature:556601-556700:-1:exon
so has part: feature:553482-553654:-1:exon
so has part: feature:549601-549672:-1:exon
so has part: feature:541276-541308:-1:exon
so has part: feature:536098-536151:-1:exon
so has part: feature:527575-527706:-1:exon
so has part: feature:527265-527383:-1:exon

XP_032565236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:663413-663521:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:570223-570369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568990-569142:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:566456-566593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:564618-564773:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:556601-556700:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553482-553654:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:549601-549672:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:541276-541308:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:536098-536151:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:527575-527706:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:527265-527383:-1:exon

CADM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: CADM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule 1 isoform X1
translation: MAGRAQPSGPAGSGGGAPGLLPLLLLLLSAAAIIPRGDGQNLVTEDVTVVEGDVATISCRVKNSDDSVIQLLNPNRQTIYFRDFRPLKDSRFQLVNFSNSELRVSLTNVSISDEGRYFCQLYTDPPQEIYTTITVLVPPRNLVIDIQKETAVEGEEIELNCTAMASRPATTIRWFKGNKELTGKSEVEQWSDMYTVTSQLLLKVGREDDGVPVICLVDHPAVKDLQTQRYLEVMYKPQVRVSQNYPLQGLTREGEPLELTCTAFGKPQPTDMRWLRVDDEMPQHVVVSGSNLLISNLNKTDNGTYRCEASNAVGKSHADYMLFVYDPPTTIPPPTTTTTTTTTIPTTITDTTATTEPAVHGFTQLPNSAEELDYGDLSGTPVPLTASTEALPTVQLSNASLAFQPDSRAGEEGAIRSVDHAVVGGVVAVVVFAMLCLLIILGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGQNNSEEKKEYFI
SIO_010081: CADM1
subclass of: SO_0000673
so part of: CADM1
location: complement(join(527265..527383,527575..527706,534081..534161,536098..536151,541276..541308,549601..549672,553482..553654,556601..556700,564618..564773,566456..566593,568990..569142,570223..570369,663413..663521))
location: region:527265-663521:-1
so has part: feature:663413-663521:-1:exon
so has part: feature:570223-570369:-1:exon
so has part: feature:568990-569142:-1:exon
so has part: feature:566456-566593:-1:exon
so has part: feature:564618-564773:-1:exon
so has part: feature:556601-556700:-1:exon
so has part: feature:553482-553654:-1:exon
so has part: feature:549601-549672:-1:exon
so has part: feature:541276-541308:-1:exon
so has part: feature:536098-536151:-1:exon
so has part: feature:534081-534161:-1:exon
so has part: feature:527575-527706:-1:exon
so has part: feature:527265-527383:-1:exon

XP_032565234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:663413-663521:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:570223-570369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568990-569142:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:566456-566593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:564618-564773:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:556601-556700:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553482-553654:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:549601-549672:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:541276-541308:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:536098-536151:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:534081-534161:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:527575-527706:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:527265-527383:-1:exon

LOC116797785
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116797785
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(878006..880418)
location: region:878006-880418:-1
so has part: feature:878006-880418:-1:exon
subclass of: SO_0000011

116797785
type: Gene
SIO_000068: ncbigene

position:878006:-1
position: 878006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:880418:-1
position: 880418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:878006-880418:-1:exon

LOC116797785
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116797785
product: uncharacterized LOC116797785
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004360752.1
SIO_010081: LOC116797785
subclass of: SO_0000673
so part of: LOC116797785
location: complement(join(878006..878148,878867..879180,880224..880418))
location: region:878006-880418:-1
so has part: feature:880224-880418:-1:exon
so has part: feature:878867-879180:-1:exon
so has part: feature:878006-878148:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:880224-880418:-1:exon

position:880224:-1
position: 880224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:878867-879180:-1:exon

position:878867:-1
position: 878867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:879180:-1
position: 879180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:878006-878148:-1:exon

position:878148:-1
position: 878148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BUD13
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: BUD13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(882459..888282)
location: region:882459-888282:-1
so has part: feature:882459-888282:-1:exon
subclass of: SO_0000010

116797784
type: Gene
SIO_000068: ncbigene

position:882459:-1
position: 882459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888282:-1
position: 888282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:882459-888282:-1:exon

BUD13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: BUD13
product: BUD13 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032709622.1
SIO_010081: BUD13
subclass of: SO_0000673
so part of: BUD13
location: complement(join(882459..883700,884025..884106,884471..884652,884933..885071,885254..885362,885579..885673,885853..886679,887192..887249,887395..887479,887911..888004,888141..888282))
location: region:882459-888282:-1
so has part: feature:888141-888282:-1:exon
so has part: feature:887911-888004:-1:exon
so has part: feature:887395-887479:-1:exon
so has part: feature:887192-887249:-1:exon
so has part: feature:885853-886679:-1:exon
so has part: feature:885579-885673:-1:exon
so has part: feature:885254-885362:-1:exon
so has part: feature:884933-885071:-1:exon
so has part: feature:884471-884652:-1:exon
so has part: feature:884025-884106:-1:exon
so has part: feature:882459-883700:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:888141-888282:-1:exon

position:888141:-1
position: 888141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:887911-888004:-1:exon

position:887911:-1
position: 887911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888004:-1
position: 888004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:887395-887479:-1:exon

position:887395:-1
position: 887395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887479:-1
position: 887479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:887192-887249:-1:exon

position:887192:-1
position: 887192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887249:-1
position: 887249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:885853-886679:-1:exon

position:885853:-1
position: 885853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886679:-1
position: 886679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:885579-885673:-1:exon

position:885579:-1
position: 885579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885673:-1
position: 885673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:885254-885362:-1:exon

position:885254:-1
position: 885254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885362:-1
position: 885362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:884933-885071:-1:exon

position:884933:-1
position: 884933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885071:-1
position: 885071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:884471-884652:-1:exon

position:884471:-1
position: 884471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:884652:-1
position: 884652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:884025-884106:-1:exon

position:884025:-1
position: 884025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:884106:-1
position: 884106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:882459-883700:-1:exon

position:883700:-1
position: 883700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BUD13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: BUD13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BUD13 homolog
translation: MAAPGVSKAEYLQRYLSGPAAPAQPRRRRKKRPPGGTGRAGMRIVDDDVSWNSIATAPQKEEEDDDEADMPVVAEFIDERPDEVKLMEEFRTNSKWKLLGDQNEDSQSSDISGPAKSAMRRQRHDSPDPSPPRGEHNGSLDPSAPRRQRHDTPDPSPPRRKRHDTPDPSPPRRKRQDTPDPSPPRRKRHDTPDPSPPRRKRHDTPDPSPPRRKRHDTPDPSPPRRKRQDTPDPSPPRKKRHDTPDPSPPRRKRHDTPDPSPPRRKRHDTPDPSPPRRKRHDTPDPSPPRKQRHDTPDLSPPRRRQRQDTPDPSPPRRRRRDTPDPSPPRRQRHDTPDSSPPRKQRCDTPDLSPPRRRRHDTPELSPPRKQRHDSPDPPPRRDKPGSPSLRKSQMKGRSSPAGKGQHRSRSPPDHSPHRQDTRGSPRKANTMSSGVRAGLVSAEVLQKEKQELQKPDKSMKHLEEESRNAKTVFRDKSGRKRNLAQEQLEQRQKAEAEAKREEQYAKWGKGLAQERQQQQNVEDAIKEMQKPLARYIDDQDLDRMLREQEREGDPMAALIKKRKAKENKEKEKPRYKGPAPPLNRFNIWPGHRWDGVDRSNGFEQQRFARIANKKAVQELAYKWSVEDM
SIO_010081: BUD13
subclass of: SO_0000673
so part of: BUD13
location: complement(join(883607..883700,884025..884106,884471..884652,884933..885071,885254..885362,885579..885673,885853..886679,887192..887249,887395..887479,887911..888004,888141..888262))
location: region:883607-888262:-1
so has part: feature:888141-888262:-1:exon
so has part: feature:887911-888004:-1:exon
so has part: feature:887395-887479:-1:exon
so has part: feature:887192-887249:-1:exon
so has part: feature:885853-886679:-1:exon
so has part: feature:885579-885673:-1:exon
so has part: feature:885254-885362:-1:exon
so has part: feature:884933-885071:-1:exon
so has part: feature:884471-884652:-1:exon
so has part: feature:884025-884106:-1:exon
so has part: feature:883607-883700:-1:exon

XP_032565513.1
type: Protein
SIO_000068: ncbiprotein

position:883607:-1
position: 883607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888262:-1
position: 888262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:888141-888262:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:887911-888004:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:887395-887479:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:887192-887249:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:885853-886679:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:885579-885673:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:885254-885362:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:884933-885071:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:884471-884652:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:884025-884106:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:883607-883700:-1:exon

ZPR1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: ZPR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(888515..892321)
location: region:888515-892321:-1
so has part: feature:888515-892321:-1:exon
subclass of: SO_0000010

116797674
type: Gene
SIO_000068: ncbigene

position:888515:-1
position: 888515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892321:-1
position: 892321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:888515-892321:-1:exon

ZPR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ZPR1
product: ZPR1 zinc finger
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_032709447.1
SIO_010081: ZPR1
subclass of: SO_0000673
so part of: ZPR1
location: complement(join(888515..888894,889012..889077,889166..889252,889347..889457,889565..889654,889948..890018,890243..890309,890403..890456,890562..890684,890762..890848,891067..891137,891232..891322,891573..891734,892160..892321))
location: region:888515-892321:-1
so has part: feature:892160-892321:-1:exon
so has part: feature:891573-891734:-1:exon
so has part: feature:891232-891322:-1:exon
so has part: feature:891067-891137:-1:exon
so has part: feature:890762-890848:-1:exon
so has part: feature:890562-890684:-1:exon
so has part: feature:890403-890456:-1:exon
so has part: feature:890243-890309:-1:exon
so has part: feature:889948-890018:-1:exon
so has part: feature:889565-889654:-1:exon
so has part: feature:889347-889457:-1:exon
so has part: feature:889166-889252:-1:exon
so has part: feature:889012-889077:-1:exon
so has part: feature:888515-888894:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:892160-892321:-1:exon

position:892160:-1
position: 892160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:891573-891734:-1:exon

position:891573:-1
position: 891573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891734:-1
position: 891734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:891232-891322:-1:exon

position:891232:-1
position: 891232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891322:-1
position: 891322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:891067-891137:-1:exon

position:891067:-1
position: 891067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891137:-1
position: 891137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:890762-890848:-1:exon

position:890762:-1
position: 890762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:890848:-1
position: 890848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:890562-890684:-1:exon

position:890562:-1
position: 890562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:890684:-1
position: 890684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:890403-890456:-1:exon

position:890403:-1
position: 890403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:890456:-1
position: 890456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:890243-890309:-1:exon

position:890243:-1
position: 890243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:890309:-1
position: 890309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:889948-890018:-1:exon

position:889948:-1
position: 889948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:890018:-1
position: 890018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:889565-889654:-1:exon

position:889565:-1
position: 889565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889654:-1
position: 889654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:889347-889457:-1:exon

position:889347:-1
position: 889347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889457:-1
position: 889457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:889166-889252:-1:exon

position:889166:-1
position: 889166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889252:-1
position: 889252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:889012-889077:-1:exon

position:889012:-1
position: 889012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889077:-1
position: 889077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:888515-888894:-1:exon

position:888894:-1
position: 888894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZPR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ZPR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ZPR1
translation: MSALGAMEPGPGSGGSLFRPLSADDGEQQPAEIESLCMNCFRNGVTRLLLTRIPFFKEIIVSSFSCDSCSWSNTEIQSAGRIQEQGVRYTLAVTSRQDMNREVVKTDCAMARIPELDFEIPAFSQKGVLTTIEGIIDRAVAGLEQDQPVRRATDEEVARKIDEFIGKLRQLKEMNSPFTFIIDDPSGNSFVENPHAPRRDDALVVTHYRRTPQQAAMLGLEGEEVDAKPPDAAEDLRDEVLQFNTNCPECNAPANTNMKVVQIPHFKEVIIMATNCDSCGHRTNEVKSGGAIEPQGTRITLRITDPSDMTRDILKSETCSVEIPELEFELGMGALGGKFTTLEGLLKDIRDLVERNPFTLGDSSTPSRTGKLQEFIGKLQEIIDGKNKAHFIMDDPAGNSYLQNVYAPEKDPELRVERYERTFEQNEDLGLNDMKTEGYEPEGASGR
SIO_010081: ZPR1
subclass of: SO_0000673
so part of: ZPR1
location: complement(join(888760..888894,889012..889077,889166..889252,889347..889457,889565..889654,889948..890018,890243..890309,890403..890456,890562..890684,890762..890848,891067..891137,891232..891322,891573..891734,892160..892288))
location: region:888760-892288:-1
so has part: feature:892160-892288:-1:exon
so has part: feature:891573-891734:-1:exon
so has part: feature:891232-891322:-1:exon
so has part: feature:891067-891137:-1:exon
so has part: feature:890762-890848:-1:exon
so has part: feature:890562-890684:-1:exon
so has part: feature:890403-890456:-1:exon
so has part: feature:890243-890309:-1:exon
so has part: feature:889948-890018:-1:exon
so has part: feature:889565-889654:-1:exon
so has part: feature:889347-889457:-1:exon
so has part: feature:889166-889252:-1:exon
so has part: feature:889012-889077:-1:exon
so has part: feature:888760-888894:-1:exon

XP_032565338.1
type: Protein
SIO_000068: ncbiprotein

position:888760:-1
position: 888760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892288:-1
position: 892288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:892160-892288:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:891573-891734:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:891232-891322:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:891067-891137:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:890762-890848:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:890562-890684:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:890403-890456:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:890243-890309:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:889948-890018:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:889565-889654:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:889347-889457:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:889166-889252:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:889012-889077:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:888760-888894:-1:exon

APOA5
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: APOA5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(892420..894646)
location: region:892420-894646:-1
so has part: feature:892420-894646:-1:exon
subclass of: SO_0000010

116797676
type: Gene
SIO_000068: ncbigene

position:892420:-1
position: 892420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:894646:-1
position: 894646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:892420-894646:-1:exon

APOA5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: APOA5
product: apolipoprotein A5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032709453.1
SIO_010081: APOA5
subclass of: SO_0000673
so part of: APOA5
location: complement(join(892420..893358,893532..893640,893715..893789,894436..894646))
location: region:892420-894646:-1
so has part: feature:894436-894646:-1:exon
so has part: feature:893715-893789:-1:exon
so has part: feature:893532-893640:-1:exon
so has part: feature:892420-893358:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:894436-894646:-1:exon

position:894436:-1
position: 894436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:893715-893789:-1:exon

position:893715:-1
position: 893715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893789:-1
position: 893789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:893532-893640:-1:exon

position:893532:-1
position: 893532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893640:-1
position: 893640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:892420-893358:-1:exon

position:893358:-1
position: 893358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

APOA5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: APOA5
product: apolipoprotein A5, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032709454.1
SIO_010081: APOA5
subclass of: SO_0000673
so part of: APOA5
location: complement(join(892420..892964,893169..893358,893532..893640,893715..893789,893988..894104))
location: region:892420-894104:-1
so has part: feature:893988-894104:-1:exon
so has part: feature:893715-893789:-1:exon
so has part: feature:893532-893640:-1:exon
so has part: feature:893169-893358:-1:exon
so has part: feature:892420-892964:-1:exon

position:894104:-1
position: 894104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:893988-894104:-1:exon

position:893988:-1
position: 893988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:893715-893789:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:893532-893640:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:893169-893358:-1:exon

position:893169:-1
position: 893169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:892420-892964:-1:exon

position:892964:-1
position: 892964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

APOA5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: APOA5
product: apolipoprotein A5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032709450.1
SIO_010081: APOA5
subclass of: SO_0000673
so part of: APOA5
location: complement(join(892420..893358,893532..893640,893715..893789,893988..894104))
location: region:892420-894104:-1
so has part: feature:893988-894104:-1:exon
so has part: feature:893715-893789:-1:exon
so has part: feature:893532-893640:-1:exon
so has part: feature:892420-893358:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:893988-894104:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:893715-893789:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:893532-893640:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:892420-893358:-1:exon

APOA5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: APOA5
product: apolipoprotein A5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032709451.1
SIO_010081: APOA5
subclass of: SO_0000673
so part of: APOA5
location: complement(join(892420..893358,893532..893640,893715..893789,893930..894015))
location: region:892420-894015:-1
so has part: feature:893930-894015:-1:exon
so has part: feature:893715-893789:-1:exon
so has part: feature:893532-893640:-1:exon
so has part: feature:892420-893358:-1:exon

position:894015:-1
position: 894015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:893930-894015:-1:exon

position:893930:-1
position: 893930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:893715-893789:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:893532-893640:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:892420-893358:-1:exon

APOA5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: APOA5
product: apolipoprotein A5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032709452.1
SIO_010081: APOA5
subclass of: SO_0000673
so part of: APOA5
location: complement(join(892420..893358,893532..893640,893715..893789,893886..893993))
location: region:892420-893993:-1
so has part: feature:893886-893993:-1:exon
so has part: feature:893715-893789:-1:exon
so has part: feature:893532-893640:-1:exon
so has part: feature:892420-893358:-1:exon

position:893993:-1
position: 893993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:893886-893993:-1:exon

position:893886:-1
position: 893886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:893715-893789:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:893532-893640:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:892420-893358:-1:exon

APOA5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: APOA5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apolipoprotein A-V isoform X2
translation: MLLKAVLLLSLLAAFPVSPAQAGQGSFWEYLSQLTGDKDSLERSHGKLGKDITNLKESIQDGVSYMGDFLGKLSPLPRGPQPQLSQDSDSLRKVIRRELESLRVKLSPYVDEVHHQVKDILHPYADRLVTEIHRNVQELHRSVAPHARATPEQLNQHIQELSAKLTRNARDLHQQIQKNLEQLKAKLSLYPESLGEHPAPPGRYREALAREVQRRVEEFRRDTYVQIQAFTRALDQETEEMRLKLSARPDPPEEPRDAPPPPVEDLRAQLDALWRDLALSLGGEAGGER
SIO_010081: APOA5
subclass of: SO_0000673
so part of: APOA5
location: complement(join(892443..892964,893169..893358,893532..893640,893715..893763))
location: region:892443-893763:-1
so has part: feature:893715-893763:-1:exon
so has part: feature:893532-893640:-1:exon
so has part: feature:893169-893358:-1:exon
so has part: feature:892443-892964:-1:exon

XP_032565345.1
type: Protein
SIO_000068: ncbiprotein

position:892443:-1
position: 892443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893763:-1
position: 893763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:893715-893763:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:893532-893640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:893169-893358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:892443-892964:-1:exon

APOA5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: APOA5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apolipoprotein A-V isoform X1
translation: MLLKAVLLLSLLAAFPVSPAQAGQGSFWEYLSQLTGDKDSLERSHGKLGKDITNLKESIQDGVSYMGDFLGKLSPLPRGPQPQLSQDSDSLRKVIRRELESLRVKLSPYVDEVHHQVGKHLDDLRHQLQPFTEELLDEVSLRARDLRRHLLPSREVTAQLLEGAGELQRFMAHYADKIAFHTDQVKDILHPYADRLVTEIHRNVQELHRSVAPHARATPEQLNQHIQELSAKLTRNARDLHQQIQKNLEQLKAKLSLYPESLGEHPAPPGRYREALAREVQRRVEEFRRDTYVQIQAFTRALDQETEEMRLKLSARPDPPEEPRDAPPPPVEDLRAQLDALWRDLALSLGGEAGGER
SIO_010081: APOA5
subclass of: SO_0000673
so part of: APOA5
location: complement(join(892443..893358,893532..893640,893715..893763))
location: region:892443-893763:-1
so has part: feature:893715-893763:-1:exon
so has part: feature:893532-893640:-1:exon
so has part: feature:892443-893358:-1:exon

XP_032565341.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:893715-893763:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:893532-893640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:892443-893358:-1:exon

APOA5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: APOA5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apolipoprotein A-V isoform X1
translation: MLLKAVLLLSLLAAFPVSPAQAGQGSFWEYLSQLTGDKDSLERSHGKLGKDITNLKESIQDGVSYMGDFLGKLSPLPRGPQPQLSQDSDSLRKVIRRELESLRVKLSPYVDEVHHQVGKHLDDLRHQLQPFTEELLDEVSLRARDLRRHLLPSREVTAQLLEGAGELQRFMAHYADKIAFHTDQVKDILHPYADRLVTEIHRNVQELHRSVAPHARATPEQLNQHIQELSAKLTRNARDLHQQIQKNLEQLKAKLSLYPESLGEHPAPPGRYREALAREVQRRVEEFRRDTYVQIQAFTRALDQETEEMRLKLSARPDPPEEPRDAPPPPVEDLRAQLDALWRDLALSLGGEAGGER
SIO_010081: APOA5
subclass of: SO_0000673
so part of: APOA5
location: complement(join(892443..893358,893532..893640,893715..893763))
location: region:892443-893763:-1
so has part: feature:893715-893763:-1:exon
so has part: feature:893532-893640:-1:exon
so has part: feature:892443-893358:-1:exon

XP_032565342.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:893715-893763:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:893532-893640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:892443-893358:-1:exon

APOA5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: APOA5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apolipoprotein A-V isoform X1
translation: MLLKAVLLLSLLAAFPVSPAQAGQGSFWEYLSQLTGDKDSLERSHGKLGKDITNLKESIQDGVSYMGDFLGKLSPLPRGPQPQLSQDSDSLRKVIRRELESLRVKLSPYVDEVHHQVGKHLDDLRHQLQPFTEELLDEVSLRARDLRRHLLPSREVTAQLLEGAGELQRFMAHYADKIAFHTDQVKDILHPYADRLVTEIHRNVQELHRSVAPHARATPEQLNQHIQELSAKLTRNARDLHQQIQKNLEQLKAKLSLYPESLGEHPAPPGRYREALAREVQRRVEEFRRDTYVQIQAFTRALDQETEEMRLKLSARPDPPEEPRDAPPPPVEDLRAQLDALWRDLALSLGGEAGGER
SIO_010081: APOA5
subclass of: SO_0000673
so part of: APOA5
location: complement(join(892443..893358,893532..893640,893715..893763))
location: region:892443-893763:-1
so has part: feature:893715-893763:-1:exon
so has part: feature:893532-893640:-1:exon
so has part: feature:892443-893358:-1:exon

XP_032565343.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:893715-893763:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:893532-893640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:892443-893358:-1:exon

APOA5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: APOA5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apolipoprotein A-V isoform X1
translation: MLLKAVLLLSLLAAFPVSPAQAGQGSFWEYLSQLTGDKDSLERSHGKLGKDITNLKESIQDGVSYMGDFLGKLSPLPRGPQPQLSQDSDSLRKVIRRELESLRVKLSPYVDEVHHQVGKHLDDLRHQLQPFTEELLDEVSLRARDLRRHLLPSREVTAQLLEGAGELQRFMAHYADKIAFHTDQVKDILHPYADRLVTEIHRNVQELHRSVAPHARATPEQLNQHIQELSAKLTRNARDLHQQIQKNLEQLKAKLSLYPESLGEHPAPPGRYREALAREVQRRVEEFRRDTYVQIQAFTRALDQETEEMRLKLSARPDPPEEPRDAPPPPVEDLRAQLDALWRDLALSLGGEAGGER
SIO_010081: APOA5
subclass of: SO_0000673
so part of: APOA5
location: complement(join(892443..893358,893532..893640,893715..893763))
location: region:892443-893763:-1
so has part: feature:893715-893763:-1:exon
so has part: feature:893532-893640:-1:exon
so has part: feature:892443-893358:-1:exon

XP_032565344.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:893715-893763:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:893532-893640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:892443-893358:-1:exon

APOA4
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: APOA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(895108..896794)
location: region:895108-896794:-1
so has part: feature:895108-896794:-1:exon
subclass of: SO_0000010

116797675
type: Gene
SIO_000068: ncbigene

position:895108:-1
position: 895108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896794:-1
position: 896794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:895108-896794:-1:exon

APOA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: APOA4
product: apolipoprotein A4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032709448.1
SIO_010081: APOA4
subclass of: SO_0000673
so part of: APOA4
location: complement(join(895108..896141,896234..896360,896482..896548,896665..896794))
location: region:895108-896794:-1
so has part: feature:896665-896794:-1:exon
so has part: feature:896482-896548:-1:exon
so has part: feature:896234-896360:-1:exon
so has part: feature:895108-896141:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:896665-896794:-1:exon

position:896665:-1
position: 896665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:896482-896548:-1:exon

position:896482:-1
position: 896482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896548:-1
position: 896548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:896234-896360:-1:exon

position:896234:-1
position: 896234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896360:-1
position: 896360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:895108-896141:-1:exon

position:896141:-1
position: 896141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

APOA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: APOA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apolipoprotein A-IV
translation: MAPKVAALVLVLLAISGARADVNPDEVASVIWKYFTELGSNAKETVDQLQQTELTKQINTLLKTNLQSVSAYAEDLQEKLVPFATELQARLAQDSQRLKEQIRRELAELQAKLAPYADEVHQQIGTNIRQLQAKMSPYAEELRSQVDRGAGELQRVLEPYATELRDRLQDNAQSIQASLSPYADRLQEQIDGGVESLKERLVPMADELKAQVAQSVAELRRGLSPYAQEVQDGLNRQLESLTAQMERAAEELRARLATSSEELRAQLSPLARELREAASGDAESLRQRLAPLAQQLDQRVGQTLEAFRQQAAPFGEAFGKQLVQQLEEMRGKLESGTAGVEDHLQLLEKEVREKVSAFLSTIPPPEN
SIO_010081: APOA4
subclass of: SO_0000673
so part of: APOA4
location: complement(join(895214..896141,896234..896360,896482..896530))
location: region:895214-896530:-1
so has part: feature:896482-896530:-1:exon
so has part: feature:896234-896360:-1:exon
so has part: feature:895214-896141:-1:exon

XP_032565339.1
type: Protein
SIO_000068: ncbiprotein

position:895214:-1
position: 895214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896530:-1
position: 896530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:896482-896530:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:896234-896360:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:895214-896141:-1:exon

APOC3
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: APOC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 897842..898625
location: region:897842-898625:1
so has part: feature:897842-898625:1:exon
subclass of: SO_0000010

116797678
type: Gene
SIO_000068: ncbigene

position:897842:1
position: 897842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:898625:1
position: 898625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:897842-898625:1:exon

APOC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: APOC3
product: apolipoprotein C3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032709456.1
SIO_010081: APOC3
subclass of: SO_0000673
so part of: APOC3
location: join(897842..897915,898027..898086,898208..898334,898438..898625)
location: region:897842-898625:1
so has part: feature:897842-897915:1:exon
so has part: feature:898027-898086:1:exon
so has part: feature:898208-898334:1:exon
so has part: feature:898438-898625:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:897842-897915:1:exon

position:897915:1
position: 897915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:898027-898086:1:exon

position:898027:1
position: 898027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:898086:1
position: 898086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:898208-898334:1:exon

position:898208:1
position: 898208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:898334:1
position: 898334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:898438-898625:1:exon

position:898438:1
position: 898438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

APOC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: APOC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apolipoprotein C-III
translation: MRASLLLLLACTAVLAVGARADSPEEPKALVQKVQELAQKASAMAKDAFSRVRESEAAQQARQWLTDNTELVKQRLVWLKEQLAELWKKTPAM
SIO_010081: APOC3
subclass of: SO_0000673
so part of: APOC3
location: join(898029..898086,898208..898334,898438..898534)
location: region:898029-898534:1
so has part: feature:898029-898086:1:exon
so has part: feature:898208-898334:1:exon
so has part: feature:898438-898534:1:exon

XP_032565347.1
type: Protein
SIO_000068: ncbiprotein

position:898029:1
position: 898029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:898534:1
position: 898534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:898029-898086:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:898208-898334:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:898438-898534:1:exon

APOA1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: APOA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(899023..900797)
location: region:899023-900797:-1
so has part: feature:899023-900797:-1:exon
subclass of: SO_0000010

116797677
type: Gene
SIO_000068: ncbigene

position:899023:-1
position: 899023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900797:-1
position: 900797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:899023-900797:-1:exon

APOA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: APOA1
product: apolipoprotein A1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 mRNAs, 282 ESTs, 21 long SRA reads, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032709455.1
SIO_010081: APOA1
subclass of: SO_0000673
so part of: APOA1
location: complement(join(899023..899869,899945..900098,900353..900408,900591..900797))
location: region:899023-900797:-1
so has part: feature:900591-900797:-1:exon
so has part: feature:900353-900408:-1:exon
so has part: feature:899945-900098:-1:exon
so has part: feature:899023-899869:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:900591-900797:-1:exon

position:900591:-1
position: 900591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:900353-900408:-1:exon

position:900353:-1
position: 900353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900408:-1
position: 900408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:899945-900098:-1:exon

position:899945:-1
position: 899945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900098:-1
position: 900098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:899023-899869:-1:exon

position:899869:-1
position: 899869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

APOA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: APOA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apolipoprotein A-I
translation: MRAVVLTLALLCLTGTQARSFWQHDEPQAPLDRLRDMLDVYLETVKASGKEAISQFEASAVGKQLDLKLGENLDTLGAATAKLREDLAPYYKEVREMWLKDTENLRQELTKDLEEVKEKIRPFLDQFSAKWTEDLEQYRQRLAPLAQELKELSKQKVELLQQKLTPVAEEARDRLRGHVEELRKNVAPFSDELRQKLSQKLEEIREKGIPQAAEYQAKVVEHLSNLREKVTPLVQDFKERLTPYTETLKARFISFLDELQKSVA
SIO_010081: APOA1
subclass of: SO_0000673
so part of: APOA1
location: complement(join(899272..899869,899945..900098,900353..900395))
location: region:899272-900395:-1
so has part: feature:900353-900395:-1:exon
so has part: feature:899945-900098:-1:exon
so has part: feature:899272-899869:-1:exon

XP_032565346.1
type: Protein
SIO_000068: ncbiprotein

position:899272:-1
position: 899272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900395:-1
position: 900395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:900353-900395:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:899945-900098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:899272-899869:-1:exon

SIK3
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: SIK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(901837..976080)
location: region:901837-976080:-1
so has part: feature:901837-976080:-1:exon
subclass of: SO_0000010

116797679
type: Gene
SIO_000068: ncbigene

position:901837:-1
position: 901837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976080:-1
position: 976080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:901837-976080:-1:exon

SIK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SIK3
product: SIK family kinase 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 long SRA reads, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032709457.1
SIO_010081: SIK3
subclass of: SO_0000673
so part of: SIK3
location: complement(join(901837..903502,903814..903981,904103..904235,904976..905139,908756..909612,909901..910258,910911..911020,911686..911771,912090..912215,912988..913138,916429..916572,919573..919643,920198..920353,921031..921184,921659..921768,921874..921954,922433..922573,922697..922807,923144..923262,923954..924077,924351..924475,930420..930580,936474..936537,938759..938875,975877..976080))
location: region:901837-976080:-1
so has part: feature:975877-976080:-1:exon
so has part: feature:938759-938875:-1:exon
so has part: feature:936474-936537:-1:exon
so has part: feature:930420-930580:-1:exon
so has part: feature:924351-924475:-1:exon
so has part: feature:923954-924077:-1:exon
so has part: feature:923144-923262:-1:exon
so has part: feature:922697-922807:-1:exon
so has part: feature:922433-922573:-1:exon
so has part: feature:921874-921954:-1:exon
so has part: feature:921659-921768:-1:exon
so has part: feature:921031-921184:-1:exon
so has part: feature:920198-920353:-1:exon
so has part: feature:919573-919643:-1:exon
so has part: feature:916429-916572:-1:exon
so has part: feature:912988-913138:-1:exon
so has part: feature:912090-912215:-1:exon
so has part: feature:911686-911771:-1:exon
so has part: feature:910911-911020:-1:exon
so has part: feature:909901-910258:-1:exon
so has part: feature:908756-909612:-1:exon
so has part: feature:904976-905139:-1:exon
so has part: feature:904103-904235:-1:exon
so has part: feature:903814-903981:-1:exon
so has part: feature:901837-903502:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:975877-976080:-1:exon

position:975877:-1
position: 975877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:938759-938875:-1:exon

position:938759:-1
position: 938759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938875:-1
position: 938875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:936474-936537:-1:exon

position:936474:-1
position: 936474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:936537:-1
position: 936537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:930420-930580:-1:exon

position:930420:-1
position: 930420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:930580:-1
position: 930580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:924351-924475:-1:exon

position:924351:-1
position: 924351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:924475:-1
position: 924475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:923954-924077:-1:exon

position:923954:-1
position: 923954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:924077:-1
position: 924077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:923144-923262:-1:exon

position:923144:-1
position: 923144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:923262:-1
position: 923262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:922697-922807:-1:exon

position:922697:-1
position: 922697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:922807:-1
position: 922807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:922433-922573:-1:exon

position:922433:-1
position: 922433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:922573:-1
position: 922573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:921874-921954:-1:exon

position:921874:-1
position: 921874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:921954:-1
position: 921954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:921659-921768:-1:exon

position:921659:-1
position: 921659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:921768:-1
position: 921768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:921031-921184:-1:exon

position:921031:-1
position: 921031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:921184:-1
position: 921184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:920198-920353:-1:exon

position:920198:-1
position: 920198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:920353:-1
position: 920353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:919573-919643:-1:exon

position:919573:-1
position: 919573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919643:-1
position: 919643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:916429-916572:-1:exon

position:916429:-1
position: 916429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:916572:-1
position: 916572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:912988-913138:-1:exon

position:912988:-1
position: 912988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:913138:-1
position: 913138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:912090-912215:-1:exon

position:912090:-1
position: 912090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:912215:-1
position: 912215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:911686-911771:-1:exon

position:911686:-1
position: 911686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:911771:-1
position: 911771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:910911-911020:-1:exon

position:910911:-1
position: 910911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:911020:-1
position: 911020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:909901-910258:-1:exon

position:909901:-1
position: 909901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:910258:-1
position: 910258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:908756-909612:-1:exon

position:908756:-1
position: 908756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:909612:-1
position: 909612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:904976-905139:-1:exon

position:904976:-1
position: 904976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:905139:-1
position: 905139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:904103-904235:-1:exon

position:904103:-1
position: 904103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:904235:-1
position: 904235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:903814-903981:-1:exon

position:903814:-1
position: 903814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:903981:-1
position: 903981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:901837-903502:-1:exon

position:903502:-1
position: 903502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SIK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SIK3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: serine/threonine-protein kinase SIK3
translation: MAAAAAAGGGGGGGGAGGPPAAPRLSPAPPPPRPPGPARIGYYEIERTIGKGNFAVVKLATHLVTRAKVAIKIIDKTQLDEENLKKIFREVQIMKMLCHPHIIRLYQVMETERMIYLVTEYASGGEIFDHLVAHGRMAEXEARRKFKQIVAAVNFCHCRNIVHRDLKAENLLLDANLNIKIADFGFSNIFTPGQLLKTWCGSPPYAAPELFEGKEYDGPKVDIWSLGVVLYVLVCGALPFDGSTLQNLRARVLSGKFRIPFFMSTECEHLIRHMLVLDPSKRLSMEQICKHKWMKLGEADAEFDRLIAECQHLKTERQLEPLNEDVLLAMADMGLDKERTVQSLRADAYDHYSAIYSLLCDRLKRHKNLRIAPSPSIPRTMTFPSANIQQTEQTSNTMNINVPQVQLINPENQIVETDGTMNLDSDEGEEPSPEALVRYLSMRRHTVGVADPRTEVMEDLQKLLPGFPRVTPQAPFLQVTPNVNFMHNVLPRQNLQPTGQLEYKEQSLLQPPTLQLLNGMGPLGRRASDGGANIQLHAQQLLKRPRGPSPLVTMTPAVPAVTPVDEESSDGEPDQEAVQRYLANRSKRHTLAMTNPTAEIPPDLQRQLGQQSFRPRAWAPHLGPDQHRSIYKDSNTLHLPTERFSPVRRFSDGAASIQAFKAHLEKMGNNSSIKQLQQECEQLQKMYGGHMDERTLEKTQQQHMLYQQEQHHQILHQQIQDCIRPPQPSPPLQAPCENQPALLTHQLQRLRIQPSSPPPNHPNNHLFRQPNSSPPPVSSSVLQPHGAASQSQFQGMPSHNTIFPQSGNCSPPPAMGLTCLGLQQQSQPQQVTIQVQEPGDMVGSSLLPGAPVGGQGLASHARGMSLSPSASQIQMQHRANLMASLSYGHRQLSKQLSADSAESHRYPPANYDQVHLHPHLFPEQPRVSPSNYSPSGGVGFPAAQQALKVPQLDQYPSFPQNAHQQQQHYTASALQQALLSPTPPDYSRHQQVPHILQGLLSPRHSLTGHTDMRLPQAEFAQLIKRRQQQQQQQEFQELFRHMSQGDAGNMGTSVGQNLSERQSLSLPYQSADTYHPQNSPQHLLKIRAQECIQQVPASVPPQGYGHQPALFHSESMEEDCACEGNRDSFPDSKSSNTLTKGCHETPLLVNAGGHGDPESLLGTANPAQELGTHQYRHQPAPGFRNKVPSRESIVGNCMDRSSPGQAMQLPDHNGLGYPVRPTSSEHPRPRTLQRHHTIQNSDDAYVQLDNLPGMSLMAGKALSSARMSDAVLSQSSLMASQQLRDRDSEECGESLEGQEHPNLGDGSQHLNTSCYPSTCITDVLLSYKHPEVPFGMEQAGV
SIO_010081: SIK3
subclass of: SO_0000673
so part of: SIK3
location: complement(join(903824..903981,904103..904235,904976..905139,908756..909612,909901..910258,910911..911020,911686..911771,912090..912215,912988..913138,916429..916572,919573..919643,920198..920353,921031..921184,921659..921768,921874..921954,922433..922573,922697..922807,923144..923262,923954..924077,924351..924475,930420..930580,936474..936537,938759..938875,975877..976080))
location: region:903824-976080:-1
so has part: feature:975877-976080:-1:exon
so has part: feature:938759-938875:-1:exon
so has part: feature:936474-936537:-1:exon
so has part: feature:930420-930580:-1:exon
so has part: feature:924351-924475:-1:exon
so has part: feature:923954-924077:-1:exon
so has part: feature:923144-923262:-1:exon
so has part: feature:922697-922807:-1:exon
so has part: feature:922433-922573:-1:exon
so has part: feature:921874-921954:-1:exon
so has part: feature:921659-921768:-1:exon
so has part: feature:921031-921184:-1:exon
so has part: feature:920198-920353:-1:exon
so has part: feature:919573-919643:-1:exon
so has part: feature:916429-916572:-1:exon
so has part: feature:912988-913138:-1:exon
so has part: feature:912090-912215:-1:exon
so has part: feature:911686-911771:-1:exon
so has part: feature:910911-911020:-1:exon
so has part: feature:909901-910258:-1:exon
so has part: feature:908756-909612:-1:exon
so has part: feature:904976-905139:-1:exon
so has part: feature:904103-904235:-1:exon
so has part: feature:903824-903981:-1:exon

XP_032565348.1
type: Protein
SIO_000068: ncbiprotein

position:903824:-1
position: 903824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:975877-976080:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:938759-938875:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:936474-936537:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:930420-930580:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:924351-924475:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:923954-924077:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:923144-923262:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:922697-922807:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:922433-922573:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:921874-921954:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:921659-921768:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:921031-921184:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:920198-920353:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:919573-919643:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:916429-916572:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:912988-913138:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:912090-912215:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:911686-911771:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:910911-911020:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:909901-910258:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:908756-909612:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:904976-905139:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:904103-904235:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:903824-903981:-1:exon

PAFAH1B2
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: PAFAH1B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 975543..983616
location: region:975543-983616:1
so has part: feature:975543-983616:1:exon
subclass of: SO_0000010

116797680
type: Gene
SIO_000068: ncbigene

position:975543:1
position: 975543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983616:1
position: 983616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:975543-983616:1:exon

PAFAH1B2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PAFAH1B2
product: platelet activating factor acetylhydrolase 1b catalytic subunit 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 8 long SRA reads, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032709461.1
SIO_010081: PAFAH1B2
subclass of: SO_0000673
so part of: PAFAH1B2
location: join(975543..975643,977769..977856,978237..978326,979133..979249,979831..979953,980445..983616)
location: region:975543-983616:1
so has part: feature:975543-975643:1:exon
so has part: feature:977769-977856:1:exon
so has part: feature:978237-978326:1:exon
so has part: feature:979133-979249:1:exon
so has part: feature:979831-979953:1:exon
so has part: feature:980445-983616:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:975543-975643:1:exon

position:975643:1
position: 975643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:977769-977856:1:exon

position:977769:1
position: 977769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:977856:1
position: 977856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:978237-978326:1:exon

position:978237:1
position: 978237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:978326:1
position: 978326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:979133-979249:1:exon

position:979133:1
position: 979133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:979249:1
position: 979249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:979831-979953:1:exon

position:979831:1
position: 979831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:979953:1
position: 979953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:980445-983616:1:exon

position:980445:1
position: 980445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PAFAH1B2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PAFAH1B2
product: platelet activating factor acetylhydrolase 1b catalytic subunit 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 8 long SRA reads, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032709463.1
SIO_010081: PAFAH1B2
subclass of: SO_0000673
so part of: PAFAH1B2
location: join(975876..975894,977769..977856,978237..978326,979133..979249,979831..979953,980445..983616)
location: region:975876-983616:1
so has part: feature:975876-975894:1:exon
so has part: feature:977769-977856:1:exon
so has part: feature:978237-978326:1:exon
so has part: feature:979133-979249:1:exon
so has part: feature:979831-979953:1:exon
so has part: feature:980445-983616:1:exon

position:975876:1
position: 975876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:975876-975894:1:exon

position:975894:1
position: 975894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:977769-977856:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:978237-978326:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:979133-979249:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:979831-979953:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:980445-983616:1:exon

PAFAH1B2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PAFAH1B2
product: platelet activating factor acetylhydrolase 1b catalytic subunit 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 8 long SRA reads, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032709460.1
SIO_010081: PAFAH1B2
subclass of: SO_0000673
so part of: PAFAH1B2
location: join(976254..976367,977769..977856,978237..978326,979133..979249,979831..979953,980445..983616)
location: region:976254-983616:1
so has part: feature:976254-976367:1:exon
so has part: feature:977769-977856:1:exon
so has part: feature:978237-978326:1:exon
so has part: feature:979133-979249:1:exon
so has part: feature:979831-979953:1:exon
so has part: feature:980445-983616:1:exon

position:976254:1
position: 976254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:976254-976367:1:exon

position:976367:1
position: 976367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:977769-977856:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:978237-978326:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:979133-979249:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:979831-979953:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:980445-983616:1:exon

PAFAH1B2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PAFAH1B2
product: platelet activating factor acetylhydrolase 1b catalytic subunit 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 8 long SRA reads, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032709462.1
SIO_010081: PAFAH1B2
subclass of: SO_0000673
so part of: PAFAH1B2
location: join(976289..976372,977769..977856,978237..978326,979133..979249,979831..979953,980445..983616)
location: region:976289-983616:1
so has part: feature:976289-976372:1:exon
so has part: feature:977769-977856:1:exon
so has part: feature:978237-978326:1:exon
so has part: feature:979133-979249:1:exon
so has part: feature:979831-979953:1:exon
so has part: feature:980445-983616:1:exon

position:976289:1
position: 976289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:976289-976372:1:exon

position:976372:1
position: 976372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:977769-977856:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:978237-978326:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:979133-979249:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:979831-979953:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:980445-983616:1:exon

PAFAH1B2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PAFAH1B2
product: platelet activating factor acetylhydrolase 1b catalytic subunit 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 ESTs, 19 long SRA reads, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032709459.1
SIO_010081: PAFAH1B2
subclass of: SO_0000673
so part of: PAFAH1B2
location: join(976744..976856,977769..977856,978237..978326,979133..979249,979831..979953,980445..983616)
location: region:976744-983616:1
so has part: feature:976744-976856:1:exon
so has part: feature:977769-977856:1:exon
so has part: feature:978237-978326:1:exon
so has part: feature:979133-979249:1:exon
so has part: feature:979831-979953:1:exon
so has part: feature:980445-983616:1:exon

position:976744:1
position: 976744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:976744-976856:1:exon

position:976856:1
position: 976856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:977769-977856:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:978237-978326:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:979133-979249:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:979831-979953:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:980445-983616:1:exon

PAFAH1B2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PAFAH1B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: platelet-activating factor acetylhydrolase IB subunit beta isoform X1
translation: MESRGKEPQPPNRMGMGDSNPAAVPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLLQQYEIWRELFSPLHALNFGIGGDTTGHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVRLINTQQPQAKVIVLGLLPRGEKPNPLRQKNAKVNNLLKASLPKLPNVQLLDVDVGFVHSDGTISYHDMFDFLHLTGGGYAKVCKPLHELIMQLLEETPEEKRAALA
SIO_010081: PAFAH1B2
subclass of: SO_0000673
so part of: PAFAH1B2
location: join(976825..976856,977769..977856,978237..978326,979133..979249,979831..979953,980445..980723)
location: region:976825-980723:1
so has part: feature:976825-976856:1:exon
so has part: feature:977769-977856:1:exon
so has part: feature:978237-978326:1:exon
so has part: feature:979133-979249:1:exon
so has part: feature:979831-979953:1:exon
so has part: feature:980445-980723:1:exon

XP_032565350.1
type: Protein
SIO_000068: ncbiprotein

position:976825:1
position: 976825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:980723:1
position: 980723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:976825-976856:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:977769-977856:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:978237-978326:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:979133-979249:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:979831-979953:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:980445-980723:1:exon

PAFAH1B2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PAFAH1B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: platelet-activating factor acetylhydrolase IB subunit beta isoform X2
translation: MGMGDSNPAAVPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLLQQYEIWRELFSPLHALNFGIGGDTTGHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVRLINTQQPQAKVIVLGLLPRGEKPNPLRQKNAKVNNLLKASLPKLPNVQLLDVDVGFVHSDGTISYHDMFDFLHLTGGGYAKVCKPLHELIMQLLEETPEEKRAALA
SIO_010081: PAFAH1B2
subclass of: SO_0000673
so part of: PAFAH1B2
location: join(977776..977856,978237..978326,979133..979249,979831..979953,980445..980723)
location: region:977776-980723:1
so has part: feature:977776-977856:1:exon
so has part: feature:978237-978326:1:exon
so has part: feature:979133-979249:1:exon
so has part: feature:979831-979953:1:exon
so has part: feature:980445-980723:1:exon

XP_032565351.1
type: Protein
SIO_000068: ncbiprotein

position:977776:1
position: 977776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:977776-977856:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:978237-978326:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:979133-979249:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:979831-979953:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:980445-980723:1:exon

PAFAH1B2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PAFAH1B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: platelet-activating factor acetylhydrolase IB subunit beta isoform X2
translation: MGMGDSNPAAVPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLLQQYEIWRELFSPLHALNFGIGGDTTGHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVRLINTQQPQAKVIVLGLLPRGEKPNPLRQKNAKVNNLLKASLPKLPNVQLLDVDVGFVHSDGTISYHDMFDFLHLTGGGYAKVCKPLHELIMQLLEETPEEKRAALA
SIO_010081: PAFAH1B2
subclass of: SO_0000673
so part of: PAFAH1B2
location: join(977776..977856,978237..978326,979133..979249,979831..979953,980445..980723)
location: region:977776-980723:1
so has part: feature:977776-977856:1:exon
so has part: feature:978237-978326:1:exon
so has part: feature:979133-979249:1:exon
so has part: feature:979831-979953:1:exon
so has part: feature:980445-980723:1:exon

XP_032565352.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:977776-977856:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:978237-978326:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:979133-979249:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:979831-979953:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:980445-980723:1:exon

PAFAH1B2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PAFAH1B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: platelet-activating factor acetylhydrolase IB subunit beta isoform X2
translation: MGMGDSNPAAVPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLLQQYEIWRELFSPLHALNFGIGGDTTGHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVRLINTQQPQAKVIVLGLLPRGEKPNPLRQKNAKVNNLLKASLPKLPNVQLLDVDVGFVHSDGTISYHDMFDFLHLTGGGYAKVCKPLHELIMQLLEETPEEKRAALA
SIO_010081: PAFAH1B2
subclass of: SO_0000673
so part of: PAFAH1B2
location: join(977776..977856,978237..978326,979133..979249,979831..979953,980445..980723)
location: region:977776-980723:1
so has part: feature:977776-977856:1:exon
so has part: feature:978237-978326:1:exon
so has part: feature:979133-979249:1:exon
so has part: feature:979831-979953:1:exon
so has part: feature:980445-980723:1:exon

XP_032565353.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:977776-977856:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:978237-978326:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:979133-979249:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:979831-979953:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:980445-980723:1:exon

PAFAH1B2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PAFAH1B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: platelet-activating factor acetylhydrolase IB subunit beta isoform X2
translation: MGMGDSNPAAVPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLLQQYEIWRELFSPLHALNFGIGGDTTGHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVRLINTQQPQAKVIVLGLLPRGEKPNPLRQKNAKVNNLLKASLPKLPNVQLLDVDVGFVHSDGTISYHDMFDFLHLTGGGYAKVCKPLHELIMQLLEETPEEKRAALA
SIO_010081: PAFAH1B2
subclass of: SO_0000673
so part of: PAFAH1B2
location: join(977776..977856,978237..978326,979133..979249,979831..979953,980445..980723)
location: region:977776-980723:1
so has part: feature:977776-977856:1:exon
so has part: feature:978237-978326:1:exon
so has part: feature:979133-979249:1:exon
so has part: feature:979831-979953:1:exon
so has part: feature:980445-980723:1:exon

XP_032565354.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:977776-977856:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:978237-978326:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:979133-979249:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:979831-979953:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:980445-980723:1:exon

SIDT2
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: SIDT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 985507..992299
location: region:985507-992299:1
so has part: feature:985507-992299:1:exon
subclass of: SO_0000010

116797681
type: Gene
SIO_000068: ncbigene

position:985507:1
position: 985507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:992299:1
position: 992299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:985507-992299:1:exon

SIDT2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 296741
gene: SIDT2
product: SID1 transmembrane family member 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004360704.1
SIO_010081: SIDT2
so part of: SIDT2
location: join(985507..985743,985911..986032,986137..986298,986408..986453,986540..986641,986715..986798,986999..987110,987218..987283,987392..987485,987615..987670,987939..987950,988090..988158,988235..988309,988503..988565,988960..989081,989154..989227,989334..989400,989533..989606,989729..989852,989937..990054,990131..990267,990355..990463,990543..990612,990727..990773,991052..991157,991259..991369,991452..991565,991654..992299)
location: region:985507-992299:1
so has part: feature:985507-985743:1:exon
so has part: feature:985911-986032:1:exon
so has part: feature:986137-986298:1:exon
so has part: feature:986408-986453:1:exon
so has part: feature:986540-986641:1:exon
so has part: feature:986715-986798:1:exon
so has part: feature:986999-987110:1:exon
so has part: feature:987218-987283:1:exon
so has part: feature:987392-987485:1:exon
so has part: feature:987615-987670:1:exon
so has part: feature:987939-987950:1:exon
so has part: feature:988090-988158:1:exon
so has part: feature:988235-988309:1:exon
so has part: feature:988503-988565:1:exon
so has part: feature:988960-989081:1:exon
so has part: feature:989154-989227:1:exon
so has part: feature:989334-989400:1:exon
so has part: feature:989533-989606:1:exon
so has part: feature:989729-989852:1:exon
so has part: feature:989937-990054:1:exon
so has part: feature:990131-990267:1:exon
so has part: feature:990355-990463:1:exon
so has part: feature:990543-990612:1:exon
so has part: feature:990727-990773:1:exon
so has part: feature:991052-991157:1:exon
so has part: feature:991259-991369:1:exon
so has part: feature:991452-991565:1:exon
so has part: feature:991654-992299:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:985507-985743:1:exon

position:985743:1
position: 985743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:985911-986032:1:exon

position:985911:1
position: 985911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:986032:1
position: 986032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:986137-986298:1:exon

position:986137:1
position: 986137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:986298:1
position: 986298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:986408-986453:1:exon

position:986408:1
position: 986408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:986453:1
position: 986453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:986540-986641:1:exon

position:986540:1
position: 986540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:986641:1
position: 986641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:986715-986798:1:exon

position:986715:1
position: 986715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:986798:1
position: 986798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:986999-987110:1:exon

position:986999:1
position: 986999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:987110:1
position: 987110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:987218-987283:1:exon

position:987218:1
position: 987218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:987283:1
position: 987283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:987392-987485:1:exon

position:987392:1
position: 987392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:987485:1
position: 987485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:987615-987670:1:exon

position:987615:1
position: 987615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:987670:1
position: 987670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:987939-987950:1:exon

position:987939:1
position: 987939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:987950:1
position: 987950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:988090-988158:1:exon

position:988090:1
position: 988090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:988158:1
position: 988158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:988235-988309:1:exon

position:988235:1
position: 988235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:988309:1
position: 988309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:988503-988565:1:exon

position:988503:1
position: 988503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:988565:1
position: 988565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:988960-989081:1:exon

position:988960:1
position: 988960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:989081:1
position: 989081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:989154-989227:1:exon

position:989154:1
position: 989154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:989227:1
position: 989227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:989334-989400:1:exon

position:989334:1
position: 989334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:989400:1
position: 989400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:989533-989606:1:exon

position:989533:1
position: 989533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:989606:1
position: 989606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:989729-989852:1:exon

position:989729:1
position: 989729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:989852:1
position: 989852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:989937-990054:1:exon

position:989937:1
position: 989937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:990054:1
position: 990054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:990131-990267:1:exon

position:990131:1
position: 990131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:990267:1
position: 990267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:990355-990463:1:exon

position:990355:1
position: 990355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:990463:1
position: 990463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:990543-990612:1:exon

position:990543:1
position: 990543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:990612:1
position: 990612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:990727-990773:1:exon

position:990727:1
position: 990727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:990773:1
position: 990773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:991052-991157:1:exon

position:991052:1
position: 991052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:991157:1
position: 991157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:991259-991369:1:exon

position:991259:1
position: 991259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:991369:1
position: 991369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:991452-991565:1:exon

position:991452:1
position: 991452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:991565:1
position: 991565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:991654-992299:1:exon

position:991654:1
position: 991654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SIDT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SIDT2
product: SID1 transmembrane family member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032709464.1
SIO_010081: SIDT2
subclass of: SO_0000673
so part of: SIDT2
location: join(985519..985743,985911..986032,986137..986298,986408..986453,986540..986641,986715..986798,986999..987110,987218..987283,987392..987485,987615..987670,987939..987950,988090..988158,988235..988309,988503..988565,988960..989081,989154..989227,989334..989400,989533..989606,989729..989852,989937..990054,990131..990267,990355..990463,990543..990619,990727..990773,991052..991157,991259..991369,991452..991565,991654..992299)
location: region:985519-992299:1
so has part: feature:985519-985743:1:exon
so has part: feature:985911-986032:1:exon
so has part: feature:986137-986298:1:exon
so has part: feature:986408-986453:1:exon
so has part: feature:986540-986641:1:exon
so has part: feature:986715-986798:1:exon
so has part: feature:986999-987110:1:exon
so has part: feature:987218-987283:1:exon
so has part: feature:987392-987485:1:exon
so has part: feature:987615-987670:1:exon
so has part: feature:987939-987950:1:exon
so has part: feature:988090-988158:1:exon
so has part: feature:988235-988309:1:exon
so has part: feature:988503-988565:1:exon
so has part: feature:988960-989081:1:exon
so has part: feature:989154-989227:1:exon
so has part: feature:989334-989400:1:exon
so has part: feature:989533-989606:1:exon
so has part: feature:989729-989852:1:exon
so has part: feature:989937-990054:1:exon
so has part: feature:990131-990267:1:exon
so has part: feature:990355-990463:1:exon
so has part: feature:990543-990619:1:exon
so has part: feature:990727-990773:1:exon
so has part: feature:991052-991157:1:exon
so has part: feature:991259-991369:1:exon
so has part: feature:991452-991565:1:exon
so has part: feature:991654-992299:1:exon

position:985519:1
position: 985519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:985519-985743:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:985911-986032:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:986137-986298:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:986408-986453:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:986540-986641:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:986715-986798:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:986999-987110:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:987218-987283:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:987392-987485:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:987615-987670:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:987939-987950:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:988090-988158:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:988235-988309:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:988503-988565:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:988960-989081:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:989154-989227:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:989334-989400:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:989533-989606:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:989729-989852:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:989937-990054:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:990131-990267:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:990355-990463:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:990543-990619:1:exon

position:990619:1
position: 990619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:990727-990773:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:991052-991157:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:991259-991369:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:991452-991565:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:991654-992299:1:exon

SIDT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SIDT2
product: SID1 transmembrane family member 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_032709466.1
SIO_010081: SIDT2
subclass of: SO_0000673
so part of: SIDT2
location: join(985519..985743,985911..986032,986137..986298,986408..986453,986540..986641,986715..986798,986999..987110,987218..987283,987392..987485,987615..987670,987939..987950,988090..988158,988235..988309,988960..989081,989154..989227,989334..989400,989533..989606,989729..989852,989937..990054,990131..990267,990355..990463,990543..990619,990727..990773,991052..991157,991259..991369,991452..991565,991654..992299)
location: region:985519-992299:1
so has part: feature:985519-985743:1:exon
so has part: feature:985911-986032:1:exon
so has part: feature:986137-986298:1:exon
so has part: feature:986408-986453:1:exon
so has part: feature:986540-986641:1:exon
so has part: feature:986715-986798:1:exon
so has part: feature:986999-987110:1:exon
so has part: feature:987218-987283:1:exon
so has part: feature:987392-987485:1:exon
so has part: feature:987615-987670:1:exon
so has part: feature:987939-987950:1:exon
so has part: feature:988090-988158:1:exon
so has part: feature:988235-988309:1:exon
so has part: feature:988960-989081:1:exon
so has part: feature:989154-989227:1:exon
so has part: feature:989334-989400:1:exon
so has part: feature:989533-989606:1:exon
so has part: feature:989729-989852:1:exon
so has part: feature:989937-990054:1:exon
so has part: feature:990131-990267:1:exon
so has part: feature:990355-990463:1:exon
so has part: feature:990543-990619:1:exon
so has part: feature:990727-990773:1:exon
so has part: feature:991052-991157:1:exon
so has part: feature:991259-991369:1:exon
so has part: feature:991452-991565:1:exon
so has part: feature:991654-992299:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:985519-985743:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:985911-986032:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:986137-986298:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:986408-986453:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:986540-986641:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:986715-986798:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:986999-987110:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:987218-987283:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:987392-987485:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:987615-987670:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:987939-987950:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:988090-988158:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:988235-988309:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:988960-989081:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:989154-989227:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:989334-989400:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:989533-989606:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:989729-989852:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:989937-990054:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:990131-990267:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:990355-990463:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:990543-990619:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:990727-990773:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:991052-991157:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:991259-991369:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:991452-991565:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:991654-992299:1:exon

SIDT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SIDT2
product: SID1 transmembrane family member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032709465.1
SIO_010081: SIDT2
subclass of: SO_0000673
so part of: SIDT2
location: join(985519..985743,985911..986032,986137..986298,986408..986453,986540..986641,986715..986798,986999..987110,987218..987283,987392..987485,987615..987670,988090..988158,988235..988309,988503..988565,988960..989081,989154..989227,989334..989400,989533..989606,989729..989852,989937..990054,990131..990267,990355..990463,990543..990619,990727..990773,991052..991157,991259..991369,991452..991565,991654..992299)
location: region:985519-992299:1
so has part: feature:985519-985743:1:exon
so has part: feature:985911-986032:1:exon
so has part: feature:986137-986298:1:exon
so has part: feature:986408-986453:1:exon
so has part: feature:986540-986641:1:exon
so has part: feature:986715-986798:1:exon
so has part: feature:986999-987110:1:exon
so has part: feature:987218-987283:1:exon
so has part: feature:987392-987485:1:exon
so has part: feature:987615-987670:1:exon
so has part: feature:988090-988158:1:exon
so has part: feature:988235-988309:1:exon
so has part: feature:988503-988565:1:exon
so has part: feature:988960-989081:1:exon
so has part: feature:989154-989227:1:exon
so has part: feature:989334-989400:1:exon
so has part: feature:989533-989606:1:exon
so has part: feature:989729-989852:1:exon
so has part: feature:989937-990054:1:exon
so has part: feature:990131-990267:1:exon
so has part: feature:990355-990463:1:exon
so has part: feature:990543-990619:1:exon
so has part: feature:990727-990773:1:exon
so has part: feature:991052-991157:1:exon
so has part: feature:991259-991369:1:exon
so has part: feature:991452-991565:1:exon
so has part: feature:991654-992299:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:985519-985743:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:985911-986032:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:986137-986298:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:986408-986453:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:986540-986641:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:986715-986798:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:986999-987110:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:987218-987283:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:987392-987485:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:987615-987670:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:988090-988158:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:988235-988309:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:988503-988565:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:988960-989081:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:989154-989227:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:989334-989400:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:989533-989606:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:989729-989852:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:989937-990054:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:990131-990267:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:990355-990463:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:990543-990619:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:990727-990773:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:991052-991157:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:991259-991369:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:991452-991565:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:991654-992299:1:exon

SIDT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SIDT2
product: SID1 transmembrane family member 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032709467.1
SIO_010081: SIDT2
subclass of: SO_0000673
so part of: SIDT2
location: join(985519..985743,985911..986032,986137..986298,986408..986453,986540..986641,986715..986798,986999..987110,987218..987283,987392..987485,987615..987670,988090..988158,988235..988309,988960..989081,989154..989227,989334..989400,989533..989606,989729..989852,989937..990054,990131..990267,990355..990463,990543..990619,990727..990773,991052..991157,991259..991369,991452..991565,991654..992299)
location: region:985519-992299:1
so has part: feature:985519-985743:1:exon
so has part: feature:985911-986032:1:exon
so has part: feature:986137-986298:1:exon
so has part: feature:986408-986453:1:exon
so has part: feature:986540-986641:1:exon
so has part: feature:986715-986798:1:exon
so has part: feature:986999-987110:1:exon
so has part: feature:987218-987283:1:exon
so has part: feature:987392-987485:1:exon
so has part: feature:987615-987670:1:exon
so has part: feature:988090-988158:1:exon
so has part: feature:988235-988309:1:exon
so has part: feature:988960-989081:1:exon
so has part: feature:989154-989227:1:exon
so has part: feature:989334-989400:1:exon
so has part: feature:989533-989606:1:exon
so has part: feature:989729-989852:1:exon
so has part: feature:989937-990054:1:exon
so has part: feature:990131-990267:1:exon
so has part: feature:990355-990463:1:exon
so has part: feature:990543-990619:1:exon
so has part: feature:990727-990773:1:exon
so has part: feature:991052-991157:1:exon
so has part: feature:991259-991369:1:exon
so has part: feature:991452-991565:1:exon
so has part: feature:991654-992299:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:985519-985743:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:985911-986032:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:986137-986298:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:986408-986453:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:986540-986641:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:986715-986798:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:986999-987110:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:987218-987283:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:987392-987485:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:987615-987670:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:988090-988158:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:988235-988309:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:988960-989081:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:989154-989227:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:989334-989400:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:989533-989606:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:989729-989852:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:989937-990054:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:990131-990267:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:990355-990463:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:990543-990619:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:990727-990773:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:991052-991157:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:991259-991369:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:991452-991565:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:991654-992299:1:exon

SIDT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SIDT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SID1 transmembrane family member 2 isoform X1
translation: MPGSGAAALAWALLAGALLLLPPPPVLPQPQPHRRNVSETEAQFNTTYTDWVDADLLHIYAFNHSVRRNTTEGVRVSVNVLSDHKDLPVLFVVRQKEAVVSFQVPLILRGLYQRKYAYQEVSRTLCQPQTKAEVETQHFYVDVSTLSLNASYQLRVTRVENFVLRTNKRFSFNATAAQPQYFKYEFPEGVDSVIVKVTSAMAFPCSVISIQDILCPVYDLDNNVAFIGMYQTMTKKAAITVQKKDFPSHSFYVVVVVKTEDEACGGPLPYYPLSKNSSPDEPVDQHNRQKMLEVMVSPAITSEAYVSSVLFCLSIFLSFYVLTLLIACWESCRQHKRKGLLSAMDSPSLDTASLLGHSRSIPDSFLGRGYDSYGYGSFGNGSSSSTEGVTDSLGSTEVSYSYVGQEQFKRRTPSAPTRPLSIPMGERSLENVAGRPRLDSLSSVEEDDYDTLADIDYDKNVIRTKKYLCVADLARKDKRVLRKKYQIYFWNIATIAVFYALPVIQLVITYQTVVNVTGNQDICYYNFLCAHPLGNLSAFNNILSNLGYILLGLLFLLIILQREINYNRALMRNDTHALECGIPKHFGLFYAMGTALMMEGLLSACYHVCPNYTNFQFDTSFMYMIAGLCMLKLYQKRHPDINASAYSAYACLALVIFFSVVGVVFGKGNTAFWIVFSVIHILATLLLSTQLYYMGRWKLDSGILRRILHVLYTDCVRQCSGPMYVDRMVLLVMGNIINWSLAAYGLIVRPNDFASYLLAIGICNLLLYFAFYIIMKLRSGERIKLIPLLCIISTSVVWGFALFFFFQGLSTWQKTPAESREHNRDCILLDFFDDHDIWHFLSSIAMFGSFLVLLTLDDDLDCIQRDKIYVF
SIO_010081: SIDT2
subclass of: SO_0000673
so part of: SIDT2
location: join(985534..985743,985911..986032,986137..986298,986408..986453,986540..986641,986715..986798,986999..987110,987218..987283,987392..987485,987615..987670,987939..987950,988090..988158,988235..988309,988503..988565,988960..989081,989154..989227,989334..989400,989533..989606,989729..989852,989937..990054,990131..990267,990355..990463,990543..990619,990727..990773,991052..991157,991259..991369,991452..991565,991654..991716)
location: region:985534-991716:1
so has part: feature:985534-985743:1:exon
so has part: feature:985911-986032:1:exon
so has part: feature:986137-986298:1:exon
so has part: feature:986408-986453:1:exon
so has part: feature:986540-986641:1:exon
so has part: feature:986715-986798:1:exon
so has part: feature:986999-987110:1:exon
so has part: feature:987218-987283:1:exon
so has part: feature:987392-987485:1:exon
so has part: feature:987615-987670:1:exon
so has part: feature:987939-987950:1:exon
so has part: feature:988090-988158:1:exon
so has part: feature:988235-988309:1:exon
so has part: feature:988503-988565:1:exon
so has part: feature:988960-989081:1:exon
so has part: feature:989154-989227:1:exon
so has part: feature:989334-989400:1:exon
so has part: feature:989533-989606:1:exon
so has part: feature:989729-989852:1:exon
so has part: feature:989937-990054:1:exon
so has part: feature:990131-990267:1:exon
so has part: feature:990355-990463:1:exon
so has part: feature:990543-990619:1:exon
so has part: feature:990727-990773:1:exon
so has part: feature:991052-991157:1:exon
so has part: feature:991259-991369:1:exon
so has part: feature:991452-991565:1:exon
so has part: feature:991654-991716:1:exon

XP_032565355.1
type: Protein
SIO_000068: ncbiprotein

position:985534:1
position: 985534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:991716:1
position: 991716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:985534-985743:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:985911-986032:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:986137-986298:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:986408-986453:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:986540-986641:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:986715-986798:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:986999-987110:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:987218-987283:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:987392-987485:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:987615-987670:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:987939-987950:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:988090-988158:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:988235-988309:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:988503-988565:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:988960-989081:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:989154-989227:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:989334-989400:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:989533-989606:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:989729-989852:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:989937-990054:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:990131-990267:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:990355-990463:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:990543-990619:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:990727-990773:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:991052-991157:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:991259-991369:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:991452-991565:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:991654-991716:1:exon

SIDT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SIDT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SID1 transmembrane family member 2 isoform X3
translation: MPGSGAAALAWALLAGALLLLPPPPVLPQPQPHRRNVSETEAQFNTTYTDWVDADLLHIYAFNHSVRRNTTEGVRVSVNVLSDHKDLPVLFVVRQKEAVVSFQVPLILRGLYQRKYAYQEVSRTLCQPQTKAEVETQHFYVDVSTLSLNASYQLRVTRVENFVLRTNKRFSFNATAAQPQYFKYEFPEGVDSVIVKVTSAMAFPCSVISIQDILCPVYDLDNNVAFIGMYQTMTKKAAITVQKKDFPSHSFYVVVVVKTEDEACGGPLPYYPLSKNSSPDEPVDQHNRQKMLEVMVSPAITSEAYVSSVLFCLSIFLSFYVLTLLIACWESCRQHKRKGLLSAMDSPSLDTASLLGHSRSIPDSFLGRGYDSYGYGSFGNGSSSSTEGVTDSLGSTEVSYSYVGERSLENVAGRPRLDSLSSVEEDDYDTLADIDYDKNVIRTKKYLCVADLARKDKRVLRKKYQIYFWNIATIAVFYALPVIQLVITYQTVVNVTGNQDICYYNFLCAHPLGNLSAFNNILSNLGYILLGLLFLLIILQREINYNRALMRNDTHALECGIPKHFGLFYAMGTALMMEGLLSACYHVCPNYTNFQFDTSFMYMIAGLCMLKLYQKRHPDINASAYSAYACLALVIFFSVVGVVFGKGNTAFWIVFSVIHILATLLLSTQLYYMGRWKLDSGILRRILHVLYTDCVRQCSGPMYVDRMVLLVMGNIINWSLAAYGLIVRPNDFASYLLAIGICNLLLYFAFYIIMKLRSGERIKLIPLLCIISTSVVWGFALFFFFQGLSTWQKTPAESREHNRDCILLDFFDDHDIWHFLSSIAMFGSFLVLLTLDDDLDCIQRDKIYVF
SIO_010081: SIDT2
subclass of: SO_0000673
so part of: SIDT2
location: join(985534..985743,985911..986032,986137..986298,986408..986453,986540..986641,986715..986798,986999..987110,987218..987283,987392..987485,987615..987670,987939..987950,988090..988158,988235..988309,988960..989081,989154..989227,989334..989400,989533..989606,989729..989852,989937..990054,990131..990267,990355..990463,990543..990619,990727..990773,991052..991157,991259..991369,991452..991565,991654..991716)
location: region:985534-991716:1
so has part: feature:985534-985743:1:exon
so has part: feature:985911-986032:1:exon
so has part: feature:986137-986298:1:exon
so has part: feature:986408-986453:1:exon
so has part: feature:986540-986641:1:exon
so has part: feature:986715-986798:1:exon
so has part: feature:986999-987110:1:exon
so has part: feature:987218-987283:1:exon
so has part: feature:987392-987485:1:exon
so has part: feature:987615-987670:1:exon
so has part: feature:987939-987950:1:exon
so has part: feature:988090-988158:1:exon
so has part: feature:988235-988309:1:exon
so has part: feature:988960-989081:1:exon
so has part: feature:989154-989227:1:exon
so has part: feature:989334-989400:1:exon
so has part: feature:989533-989606:1:exon
so has part: feature:989729-989852:1:exon
so has part: feature:989937-990054:1:exon
so has part: feature:990131-990267:1:exon
so has part: feature:990355-990463:1:exon
so has part: feature:990543-990619:1:exon
so has part: feature:990727-990773:1:exon
so has part: feature:991052-991157:1:exon
so has part: feature:991259-991369:1:exon
so has part: feature:991452-991565:1:exon
so has part: feature:991654-991716:1:exon

XP_032565357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:985534-985743:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:985911-986032:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:986137-986298:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:986408-986453:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:986540-986641:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:986715-986798:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:986999-987110:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:987218-987283:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:987392-987485:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:987615-987670:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:987939-987950:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:988090-988158:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:988235-988309:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:988960-989081:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:989154-989227:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:989334-989400:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:989533-989606:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:989729-989852:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:989937-990054:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:990131-990267:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:990355-990463:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:990543-990619:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:990727-990773:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:991052-991157:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:991259-991369:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:991452-991565:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:991654-991716:1:exon

SIDT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SIDT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SID1 transmembrane family member 2 isoform X2
translation: MPGSGAAALAWALLAGALLLLPPPPVLPQPQPHRRNVSETEAQFNTTYTDWVDADLLHIYAFNHSVRRNTTEGVRVSVNVLSDHKDLPVLFVVRQKEAVVSFQVPLILRGLYQRKYAYQEVSRTLCQPQTKAEVETQHFYVDVSTLSLNASYQLRVTRVENFVLRTNKRFSFNATAAQPQYFKYEFPEGVDSVIVKVTSAMAFPCSVISIQDILCPVYDLDNNVAFIGMYQTMTKKAAITVQKKDFPSHSFYVVVVVKTEDEACGGPLPYYPLSKNSSPDEPVDQHNRQKMLEVMVSPAITSEAYVSSVLFCLSIFLSFYVLTLLIACWESCRQHKRKGLLSAMDSPSLDTGHSRSIPDSFLGRGYDSYGYGSFGNGSSSSTEGVTDSLGSTEVSYSYVGQEQFKRRTPSAPTRPLSIPMGERSLENVAGRPRLDSLSSVEEDDYDTLADIDYDKNVIRTKKYLCVADLARKDKRVLRKKYQIYFWNIATIAVFYALPVIQLVITYQTVVNVTGNQDICYYNFLCAHPLGNLSAFNNILSNLGYILLGLLFLLIILQREINYNRALMRNDTHALECGIPKHFGLFYAMGTALMMEGLLSACYHVCPNYTNFQFDTSFMYMIAGLCMLKLYQKRHPDINASAYSAYACLALVIFFSVVGVVFGKGNTAFWIVFSVIHILATLLLSTQLYYMGRWKLDSGILRRILHVLYTDCVRQCSGPMYVDRMVLLVMGNIINWSLAAYGLIVRPNDFASYLLAIGICNLLLYFAFYIIMKLRSGERIKLIPLLCIISTSVVWGFALFFFFQGLSTWQKTPAESREHNRDCILLDFFDDHDIWHFLSSIAMFGSFLVLLTLDDDLDCIQRDKIYVF
SIO_010081: SIDT2
subclass of: SO_0000673
so part of: SIDT2
location: join(985534..985743,985911..986032,986137..986298,986408..986453,986540..986641,986715..986798,986999..987110,987218..987283,987392..987485,987615..987670,988090..988158,988235..988309,988503..988565,988960..989081,989154..989227,989334..989400,989533..989606,989729..989852,989937..990054,990131..990267,990355..990463,990543..990619,990727..990773,991052..991157,991259..991369,991452..991565,991654..991716)
location: region:985534-991716:1
so has part: feature:985534-985743:1:exon
so has part: feature:985911-986032:1:exon
so has part: feature:986137-986298:1:exon
so has part: feature:986408-986453:1:exon
so has part: feature:986540-986641:1:exon
so has part: feature:986715-986798:1:exon
so has part: feature:986999-987110:1:exon
so has part: feature:987218-987283:1:exon
so has part: feature:987392-987485:1:exon
so has part: feature:987615-987670:1:exon
so has part: feature:988090-988158:1:exon
so has part: feature:988235-988309:1:exon
so has part: feature:988503-988565:1:exon
so has part: feature:988960-989081:1:exon
so has part: feature:989154-989227:1:exon
so has part: feature:989334-989400:1:exon
so has part: feature:989533-989606:1:exon
so has part: feature:989729-989852:1:exon
so has part: feature:989937-990054:1:exon
so has part: feature:990131-990267:1:exon
so has part: feature:990355-990463:1:exon
so has part: feature:990543-990619:1:exon
so has part: feature:990727-990773:1:exon
so has part: feature:991052-991157:1:exon
so has part: feature:991259-991369:1:exon
so has part: feature:991452-991565:1:exon
so has part: feature:991654-991716:1:exon

XP_032565356.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:985534-985743:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:985911-986032:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:986137-986298:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:986408-986453:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:986540-986641:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:986715-986798:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:986999-987110:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:987218-987283:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:987392-987485:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:987615-987670:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:988090-988158:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:988235-988309:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:988503-988565:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:988960-989081:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:989154-989227:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:989334-989400:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:989533-989606:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:989729-989852:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:989937-990054:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:990131-990267:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:990355-990463:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:990543-990619:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:990727-990773:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:991052-991157:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:991259-991369:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:991452-991565:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:991654-991716:1:exon

SIDT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SIDT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SID1 transmembrane family member 2 isoform X4
translation: MPGSGAAALAWALLAGALLLLPPPPVLPQPQPHRRNVSETEAQFNTTYTDWVDADLLHIYAFNHSVRRNTTEGVRVSVNVLSDHKDLPVLFVVRQKEAVVSFQVPLILRGLYQRKYAYQEVSRTLCQPQTKAEVETQHFYVDVSTLSLNASYQLRVTRVENFVLRTNKRFSFNATAAQPQYFKYEFPEGVDSVIVKVTSAMAFPCSVISIQDILCPVYDLDNNVAFIGMYQTMTKKAAITVQKKDFPSHSFYVVVVVKTEDEACGGPLPYYPLSKNSSPDEPVDQHNRQKMLEVMVSPAITSEAYVSSVLFCLSIFLSFYVLTLLIACWESCRQHKRKGLLSAMDSPSLDTGHSRSIPDSFLGRGYDSYGYGSFGNGSSSSTEGVTDSLGSTEVSYSYVGERSLENVAGRPRLDSLSSVEEDDYDTLADIDYDKNVIRTKKYLCVADLARKDKRVLRKKYQIYFWNIATIAVFYALPVIQLVITYQTVVNVTGNQDICYYNFLCAHPLGNLSAFNNILSNLGYILLGLLFLLIILQREINYNRALMRNDTHALECGIPKHFGLFYAMGTALMMEGLLSACYHVCPNYTNFQFDTSFMYMIAGLCMLKLYQKRHPDINASAYSAYACLALVIFFSVVGVVFGKGNTAFWIVFSVIHILATLLLSTQLYYMGRWKLDSGILRRILHVLYTDCVRQCSGPMYVDRMVLLVMGNIINWSLAAYGLIVRPNDFASYLLAIGICNLLLYFAFYIIMKLRSGERIKLIPLLCIISTSVVWGFALFFFFQGLSTWQKTPAESREHNRDCILLDFFDDHDIWHFLSSIAMFGSFLVLLTLDDDLDCIQRDKIYVF
SIO_010081: SIDT2
subclass of: SO_0000673
so part of: SIDT2
location: join(985534..985743,985911..986032,986137..986298,986408..986453,986540..986641,986715..986798,986999..987110,987218..987283,987392..987485,987615..987670,988090..988158,988235..988309,988960..989081,989154..989227,989334..989400,989533..989606,989729..989852,989937..990054,990131..990267,990355..990463,990543..990619,990727..990773,991052..991157,991259..991369,991452..991565,991654..991716)
location: region:985534-991716:1
so has part: feature:985534-985743:1:exon
so has part: feature:985911-986032:1:exon
so has part: feature:986137-986298:1:exon
so has part: feature:986408-986453:1:exon
so has part: feature:986540-986641:1:exon
so has part: feature:986715-986798:1:exon
so has part: feature:986999-987110:1:exon
so has part: feature:987218-987283:1:exon
so has part: feature:987392-987485:1:exon
so has part: feature:987615-987670:1:exon
so has part: feature:988090-988158:1:exon
so has part: feature:988235-988309:1:exon
so has part: feature:988960-989081:1:exon
so has part: feature:989154-989227:1:exon
so has part: feature:989334-989400:1:exon
so has part: feature:989533-989606:1:exon
so has part: feature:989729-989852:1:exon
so has part: feature:989937-990054:1:exon
so has part: feature:990131-990267:1:exon
so has part: feature:990355-990463:1:exon
so has part: feature:990543-990619:1:exon
so has part: feature:990727-990773:1:exon
so has part: feature:991052-991157:1:exon
so has part: feature:991259-991369:1:exon
so has part: feature:991452-991565:1:exon
so has part: feature:991654-991716:1:exon

XP_032565358.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:985534-985743:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:985911-986032:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:986137-986298:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:986408-986453:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:986540-986641:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:986715-986798:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:986999-987110:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:987218-987283:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:987392-987485:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:987615-987670:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:988090-988158:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:988235-988309:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:988960-989081:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:989154-989227:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:989334-989400:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:989533-989606:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:989729-989852:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:989937-990054:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:990131-990267:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:990355-990463:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:990543-990619:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:990727-990773:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:991052-991157:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:991259-991369:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:991452-991565:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:991654-991716:1:exon

TAGLN
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: TAGLN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 985968..995833
location: region:985968-995833:1
so has part: feature:985968-995833:1:exon
subclass of: SO_0000010

116797683
type: Gene
SIO_000068: ncbigene

position:985968:1
position: 985968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:995833:1
position: 995833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:985968-995833:1:exon

TAGLN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: TAGLN
product: transgelin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032709472.1
SIO_010081: TAGLN
subclass of: SO_0000673
so part of: TAGLN
location: join(985968..985973,993128..993174,994646..994844,994926..995103,995189..995291,995481..995833)
location: region:985968-995833:1
so has part: feature:985968-985973:1:exon
so has part: feature:993128-993174:1:exon
so has part: feature:994646-994844:1:exon
so has part: feature:994926-995103:1:exon
so has part: feature:995189-995291:1:exon
so has part: feature:995481-995833:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:985968-985973:1:exon

position:985973:1
position: 985973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:993128-993174:1:exon

position:993128:1
position: 993128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:993174:1
position: 993174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:994646-994844:1:exon

position:994646:1
position: 994646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:994844:1
position: 994844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:994926-995103:1:exon

position:994926:1
position: 994926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:995103:1
position: 995103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:995189-995291:1:exon

position:995189:1
position: 995189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:995291:1
position: 995291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:995481-995833:1:exon

position:995481:1
position: 995481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SIDT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SIDT2
product: SID1 transmembrane family member 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032709469.1
SIO_010081: SIDT2
subclass of: SO_0000673
so part of: SIDT2
location: join(988276..988309,988508..988565,988960..989081,989154..989227,989334..989400,989533..989606,989729..989852,989937..990054,990131..990267,990355..990463,990543..990619,990727..990773,991052..991157,991259..991369,991452..991565,991654..992299)
location: region:988276-992299:1
so has part: feature:988276-988309:1:exon
so has part: feature:988508-988565:1:exon
so has part: feature:988960-989081:1:exon
so has part: feature:989154-989227:1:exon
so has part: feature:989334-989400:1:exon
so has part: feature:989533-989606:1:exon
so has part: feature:989729-989852:1:exon
so has part: feature:989937-990054:1:exon
so has part: feature:990131-990267:1:exon
so has part: feature:990355-990463:1:exon
so has part: feature:990543-990619:1:exon
so has part: feature:990727-990773:1:exon
so has part: feature:991052-991157:1:exon
so has part: feature:991259-991369:1:exon
so has part: feature:991452-991565:1:exon
so has part: feature:991654-992299:1:exon

position:988276:1
position: 988276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:988276-988309:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:988508-988565:1:exon

position:988508:1
position: 988508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:988960-989081:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:989154-989227:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:989334-989400:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:989533-989606:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:989729-989852:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:989937-990054:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:990131-990267:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:990355-990463:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:990543-990619:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:990727-990773:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:991052-991157:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:991259-991369:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:991452-991565:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:991654-992299:1:exon

SIDT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SIDT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SID1 transmembrane family member 2 isoform X5
translation: MGERSLENVAGRPRLDSLSSVEEDDYDTLADIDYDKNVIRTKKYLCVADLARKDKRVLRKKYQIYFWNIATIAVFYALPVIQLVITYQTVVNVTGNQDICYYNFLCAHPLGNLSAFNNILSNLGYILLGLLFLLIILQREINYNRALMRNDTHALECGIPKHFGLFYAMGTALMMEGLLSACYHVCPNYTNFQFDTSFMYMIAGLCMLKLYQKRHPDINASAYSAYACLALVIFFSVVGVVFGKGNTAFWIVFSVIHILATLLLSTQLYYMGRWKLDSGILRRILHVLYTDCVRQCSGPMYVDRMVLLVMGNIINWSLAAYGLIVRPNDFASYLLAIGICNLLLYFAFYIIMKLRSGERIKLIPLLCIISTSVVWGFALFFFFQGLSTWQKTPAESREHNRDCILLDFFDDHDIWHFLSSIAMFGSFLVLLTLDDDLDCIQRDKIYVF
SIO_010081: SIDT2
subclass of: SO_0000673
so part of: SIDT2
location: join(988562..988565,988960..989081,989154..989227,989334..989400,989533..989606,989729..989852,989937..990054,990131..990267,990355..990463,990543..990619,990727..990773,991052..991157,991259..991369,991452..991565,991654..991716)
location: region:988562-991716:1
so has part: feature:988562-988565:1:exon
so has part: feature:988960-989081:1:exon
so has part: feature:989154-989227:1:exon
so has part: feature:989334-989400:1:exon
so has part: feature:989533-989606:1:exon
so has part: feature:989729-989852:1:exon
so has part: feature:989937-990054:1:exon
so has part: feature:990131-990267:1:exon
so has part: feature:990355-990463:1:exon
so has part: feature:990543-990619:1:exon
so has part: feature:990727-990773:1:exon
so has part: feature:991052-991157:1:exon
so has part: feature:991259-991369:1:exon
so has part: feature:991452-991565:1:exon
so has part: feature:991654-991716:1:exon

XP_032565360.1
type: Protein
SIO_000068: ncbiprotein

position:988562:1
position: 988562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:988562-988565:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:988960-989081:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:989154-989227:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:989334-989400:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:989533-989606:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:989729-989852:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:989937-990054:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:990131-990267:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:990355-990463:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:990543-990619:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:990727-990773:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:991052-991157:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:991259-991369:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:991452-991565:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:991654-991716:1:exon

TAGLN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: TAGLN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transgelin
translation: MANKGPAYGMSRDVQSKIEKKYDDELEDRLVEWIVAQCGSSVGRPERGRLGFQVWLKNGIVLSRLVNSLYPDGSKPVKIPDAPPTMVFKQMEQIAQFLKAAEDYGVTKTDMFQTVDLFEAKDMAAVQRTLMALGSLAITKNDGHYHGDPNWFMKKAQEHKREFTESQLKEGKNIIGLQMGTNKGASQAGMSYGRPRQIIS
SIO_010081: TAGLN
subclass of: SO_0000673
so part of: TAGLN
location: join(994665..994844,994926..995103,995189..995291,995481..995622)
location: region:994665-995622:1
so has part: feature:994665-994844:1:exon
so has part: feature:994926-995103:1:exon
so has part: feature:995189-995291:1:exon
so has part: feature:995481-995622:1:exon

XP_032565363.1
type: Protein
SIO_000068: ncbiprotein

position:994665:1
position: 994665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:995622:1
position: 995622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:994665-994844:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:994926-995103:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:995189-995291:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:995481-995622:1:exon

PCSK7
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: PCSK7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(996517..1010308)
location: region:996517-1010308:-1
so has part: feature:996517-1010308:-1:exon
subclass of: SO_0000010

116797682
type: Gene
SIO_000068: ncbigene

position:996517:-1
position: 996517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1010308:-1
position: 1010308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:996517-1010308:-1:exon

PCSK7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PCSK7
product: proprotein convertase subtilisin/kexin type 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 9 ESTs, 3 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032709470.1
SIO_010081: PCSK7
subclass of: SO_0000673
so part of: PCSK7
location: complement(join(996517..997870,998026..998143,998412..998505,998626..998720,998832..998988,999763..999865,1000780..1000887,1001950..1002117,1004208..1004308,1004892..1005030,1006128..1006182,1006726..1006816,1007790..1007955,1008368..1008502,1008904..1009383,1010254..1010308))
location: region:996517-1010308:-1
so has part: feature:1010254-1010308:-1:exon
so has part: feature:1008904-1009383:-1:exon
so has part: feature:1008368-1008502:-1:exon
so has part: feature:1007790-1007955:-1:exon
so has part: feature:1006726-1006816:-1:exon
so has part: feature:1006128-1006182:-1:exon
so has part: feature:1004892-1005030:-1:exon
so has part: feature:1004208-1004308:-1:exon
so has part: feature:1001950-1002117:-1:exon
so has part: feature:1000780-1000887:-1:exon
so has part: feature:999763-999865:-1:exon
so has part: feature:998832-998988:-1:exon
so has part: feature:998626-998720:-1:exon
so has part: feature:998412-998505:-1:exon
so has part: feature:998026-998143:-1:exon
so has part: feature:996517-997870:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1010254-1010308:-1:exon

position:1010254:-1
position: 1010254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1008904-1009383:-1:exon

position:1008904:-1
position: 1008904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1009383:-1
position: 1009383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1008368-1008502:-1:exon

position:1008368:-1
position: 1008368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1008502:-1
position: 1008502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1007790-1007955:-1:exon

position:1007790:-1
position: 1007790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1007955:-1
position: 1007955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1006726-1006816:-1:exon

position:1006726:-1
position: 1006726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1006816:-1
position: 1006816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1006128-1006182:-1:exon

position:1006128:-1
position: 1006128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1006182:-1
position: 1006182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1004892-1005030:-1:exon

position:1004892:-1
position: 1004892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1005030:-1
position: 1005030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1004208-1004308:-1:exon

position:1004208:-1
position: 1004208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1004308:-1
position: 1004308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1001950-1002117:-1:exon

position:1001950:-1
position: 1001950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1002117:-1
position: 1002117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1000780-1000887:-1:exon

position:1000780:-1
position: 1000780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1000887:-1
position: 1000887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:999763-999865:-1:exon

position:999763:-1
position: 999763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:999865:-1
position: 999865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:998832-998988:-1:exon

position:998832:-1
position: 998832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:998988:-1
position: 998988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:998626-998720:-1:exon

position:998626:-1
position: 998626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:998720:-1
position: 998720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:998412-998505:-1:exon

position:998412:-1
position: 998412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:998505:-1
position: 998505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:998026-998143:-1:exon

position:998026:-1
position: 998026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:998143:-1
position: 998143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:996517-997870:-1:exon

position:997870:-1
position: 997870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCSK7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PCSK7
product: proprotein convertase subtilisin/kexin type 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 ESTs, 1 long SRA read, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032709471.1
SIO_010081: PCSK7
subclass of: SO_0000673
so part of: PCSK7
location: complement(join(996517..997870,998026..998143,998412..998505,998626..998720,998832..998988,999763..999865,1000780..1000887,1001950..1002117,1004208..1004308,1004892..1005030,1006128..1006182,1006726..1006816,1007790..1007955,1008368..1008502,1008904..1009383,1009498..1009674))
location: region:996517-1009674:-1
so has part: feature:1009498-1009674:-1:exon
so has part: feature:1008904-1009383:-1:exon
so has part: feature:1008368-1008502:-1:exon
so has part: feature:1007790-1007955:-1:exon
so has part: feature:1006726-1006816:-1:exon
so has part: feature:1006128-1006182:-1:exon
so has part: feature:1004892-1005030:-1:exon
so has part: feature:1004208-1004308:-1:exon
so has part: feature:1001950-1002117:-1:exon
so has part: feature:1000780-1000887:-1:exon
so has part: feature:999763-999865:-1:exon
so has part: feature:998832-998988:-1:exon
so has part: feature:998626-998720:-1:exon
so has part: feature:998412-998505:-1:exon
so has part: feature:998026-998143:-1:exon
so has part: feature:996517-997870:-1:exon

position:1009674:-1
position: 1009674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1009498-1009674:-1:exon

position:1009498:-1
position: 1009498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1008904-1009383:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1008368-1008502:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1007790-1007955:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1006726-1006816:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1006128-1006182:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1004892-1005030:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1004208-1004308:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1001950-1002117:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1000780-1000887:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:999763-999865:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:998832-998988:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:998626-998720:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:998412-998505:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:998026-998143:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:996517-997870:-1:exon

PCSK7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PCSK7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proprotein convertase subtilisin/kexin type 7
translation: MPHWRQGVPLWSAGMEATLCIHTCLWLSAAWIPLASPAGAACGGQCSLDTEGHHGKLTWAVSLDAPEEELEQRAEELARTAGLVNMGRVGELKGHYLLAYQPDGRAGSEPEAIRRSVDTLFAQHDSVRWHSEQKLLKRSKRSLHFNDPKYPQQWHLNNRKSPGKDINVTGVWERNVTGRGVTVVVVDDGVEHTIKDIQPNYSPEGSYDLNSNDPDPMPHPDEENGNHHGTRCAGEIAAVPNNSFCTVGVAYGSRIAGIRVLDGPLTDSMEAIAFNKHYQINDIYSCSWGPDDDGKTVDGPHQLGKAALQHGVIAGRRGFGSIFVVASGNGGQHSDNCNYDGYANSIYTVTIGAVDETGSMPFYAEECASMLAVTFSGGDKMMRSIVTTDWDLQKGTGCTEGHTGTSAAAPLAAGMIALMLQVRPCLTWRDVQHIIVFTATKYEDRHAKWDTNQAGFSHSHQHGFGLLNAWRLVNAAKIWESVPYLASYVSPVLKEGRSIPLLPRELEVAWNVTTADLELSGMRTLEHVAVTVTITHPRRGNLEIRLFCPSGMMSLIGTTRSMDSDPNGFSDWTFSTVRCWGEEAQGTYRLLVRDIGDESLRPGTLKQWQLTLYGSSWSPAEMKERHRLLEEAMSGQYLSSNFSLPCPPGLDIPEEQHYTITANTLKTLLLLGCFAVFWTFYYMLEVCLTRKDVGLDLACSGSPSCRWYQQGGKHRALESGLEMESVPLYREKDVEEAEVECEHPEPARDGEEGSWTPTHPELPSNGRAVSFHEAAPTGAGYLGREAPAELLLEDREHRPC
SIO_010081: PCSK7
subclass of: SO_0000673
so part of: PCSK7
location: complement(join(997466..997870,998026..998143,998412..998505,998626..998720,998832..998988,999763..999865,1000780..1000887,1001950..1002117,1004208..1004308,1004892..1005030,1006128..1006182,1006726..1006816,1007790..1007955,1008368..1008502,1008904..1009371))
location: region:997466-1009371:-1
so has part: feature:1008904-1009371:-1:exon
so has part: feature:1008368-1008502:-1:exon
so has part: feature:1007790-1007955:-1:exon
so has part: feature:1006726-1006816:-1:exon
so has part: feature:1006128-1006182:-1:exon
so has part: feature:1004892-1005030:-1:exon
so has part: feature:1004208-1004308:-1:exon
so has part: feature:1001950-1002117:-1:exon
so has part: feature:1000780-1000887:-1:exon
so has part: feature:999763-999865:-1:exon
so has part: feature:998832-998988:-1:exon
so has part: feature:998626-998720:-1:exon
so has part: feature:998412-998505:-1:exon
so has part: feature:998026-998143:-1:exon
so has part: feature:997466-997870:-1:exon

XP_032565361.1
type: Protein
SIO_000068: ncbiprotein

position:997466:-1
position: 997466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1009371:-1
position: 1009371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1008904-1009371:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1008368-1008502:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1007790-1007955:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1006726-1006816:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1006128-1006182:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1004892-1005030:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1004208-1004308:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1001950-1002117:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1000780-1000887:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:999763-999865:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:998832-998988:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:998626-998720:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:998412-998505:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:998026-998143:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:997466-997870:-1:exon

PCSK7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PCSK7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proprotein convertase subtilisin/kexin type 7
translation: MPHWRQGVPLWSAGMEATLCIHTCLWLSAAWIPLASPAGAACGGQCSLDTEGHHGKLTWAVSLDAPEEELEQRAEELARTAGLVNMGRVGELKGHYLLAYQPDGRAGSEPEAIRRSVDTLFAQHDSVRWHSEQKLLKRSKRSLHFNDPKYPQQWHLNNRKSPGKDINVTGVWERNVTGRGVTVVVVDDGVEHTIKDIQPNYSPEGSYDLNSNDPDPMPHPDEENGNHHGTRCAGEIAAVPNNSFCTVGVAYGSRIAGIRVLDGPLTDSMEAIAFNKHYQINDIYSCSWGPDDDGKTVDGPHQLGKAALQHGVIAGRRGFGSIFVVASGNGGQHSDNCNYDGYANSIYTVTIGAVDETGSMPFYAEECASMLAVTFSGGDKMMRSIVTTDWDLQKGTGCTEGHTGTSAAAPLAAGMIALMLQVRPCLTWRDVQHIIVFTATKYEDRHAKWDTNQAGFSHSHQHGFGLLNAWRLVNAAKIWESVPYLASYVSPVLKEGRSIPLLPRELEVAWNVTTADLELSGMRTLEHVAVTVTITHPRRGNLEIRLFCPSGMMSLIGTTRSMDSDPNGFSDWTFSTVRCWGEEAQGTYRLLVRDIGDESLRPGTLKQWQLTLYGSSWSPAEMKERHRLLEEAMSGQYLSSNFSLPCPPGLDIPEEQHYTITANTLKTLLLLGCFAVFWTFYYMLEVCLTRKDVGLDLACSGSPSCRWYQQGGKHRALESGLEMESVPLYREKDVEEAEVECEHPEPARDGEEGSWTPTHPELPSNGRAVSFHEAAPTGAGYLGREAPAELLLEDREHRPC
SIO_010081: PCSK7
subclass of: SO_0000673
so part of: PCSK7
location: complement(join(997466..997870,998026..998143,998412..998505,998626..998720,998832..998988,999763..999865,1000780..1000887,1001950..1002117,1004208..1004308,1004892..1005030,1006128..1006182,1006726..1006816,1007790..1007955,1008368..1008502,1008904..1009371))
location: region:997466-1009371:-1
so has part: feature:1008904-1009371:-1:exon
so has part: feature:1008368-1008502:-1:exon
so has part: feature:1007790-1007955:-1:exon
so has part: feature:1006726-1006816:-1:exon
so has part: feature:1006128-1006182:-1:exon
so has part: feature:1004892-1005030:-1:exon
so has part: feature:1004208-1004308:-1:exon
so has part: feature:1001950-1002117:-1:exon
so has part: feature:1000780-1000887:-1:exon
so has part: feature:999763-999865:-1:exon
so has part: feature:998832-998988:-1:exon
so has part: feature:998626-998720:-1:exon
so has part: feature:998412-998505:-1:exon
so has part: feature:998026-998143:-1:exon
so has part: feature:997466-997870:-1:exon

XP_032565362.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1008904-1009371:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1008368-1008502:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1007790-1007955:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1006726-1006816:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1006128-1006182:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1004892-1005030:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1004208-1004308:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1001950-1002117:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1000780-1000887:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:999763-999865:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:998832-998988:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:998626-998720:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:998412-998505:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:998026-998143:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:997466-997870:-1:exon

RNF214
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: RNF214
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1010788..1018566
location: region:1010788-1018566:1
so has part: feature:1010788-1018566:1:exon
subclass of: SO_0000010

116797730
type: Gene
SIO_000068: ncbigene

position:1010788:1
position: 1010788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1018566:1
position: 1018566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1010788-1018566:1:exon

RNF214
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: RNF214
product: ring finger protein 214
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, 3 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032709547.1
SIO_010081: RNF214
subclass of: SO_0000673
so part of: RNF214
location: join(1010788..1010867,1011728..1011787,1012161..1012301,1012571..1012710,1013212..1013280,1014088..1014184,1014446..1014534,1014970..1015072,1015465..1015563,1015943..1016319,1016749..1016884,1017115..1017222,1017555..1017650,1018311..1018566)
location: region:1010788-1018566:1
so has part: feature:1010788-1010867:1:exon
so has part: feature:1011728-1011787:1:exon
so has part: feature:1012161-1012301:1:exon
so has part: feature:1012571-1012710:1:exon
so has part: feature:1013212-1013280:1:exon
so has part: feature:1014088-1014184:1:exon
so has part: feature:1014446-1014534:1:exon
so has part: feature:1014970-1015072:1:exon
so has part: feature:1015465-1015563:1:exon
so has part: feature:1015943-1016319:1:exon
so has part: feature:1016749-1016884:1:exon
so has part: feature:1017115-1017222:1:exon
so has part: feature:1017555-1017650:1:exon
so has part: feature:1018311-1018566:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1010788-1010867:1:exon

position:1010867:1
position: 1010867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1011728-1011787:1:exon

position:1011728:1
position: 1011728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011787:1
position: 1011787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1012161-1012301:1:exon

position:1012161:1
position: 1012161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012301:1
position: 1012301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1012571-1012710:1:exon

position:1012571:1
position: 1012571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012710:1
position: 1012710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1013212-1013280:1:exon

position:1013212:1
position: 1013212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013280:1
position: 1013280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1014088-1014184:1:exon

position:1014088:1
position: 1014088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1014184:1
position: 1014184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1014446-1014534:1:exon

position:1014446:1
position: 1014446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1014534:1
position: 1014534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1014970-1015072:1:exon

position:1014970:1
position: 1014970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1015072:1
position: 1015072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1015465-1015563:1:exon

position:1015465:1
position: 1015465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1015563:1
position: 1015563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1015943-1016319:1:exon

position:1015943:1
position: 1015943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1016319:1
position: 1016319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1016749-1016884:1:exon

position:1016749:1
position: 1016749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1016884:1
position: 1016884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1017115-1017222:1:exon

position:1017115:1
position: 1017115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1017222:1
position: 1017222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1017555-1017650:1:exon

position:1017555:1
position: 1017555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1017650:1
position: 1017650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1018311-1018566:1:exon

position:1018311:1
position: 1018311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RNF214
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: RNF214
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 214
translation: MMSERALLKERYQEVLDKQRQVENQLQVQLKQLQQRREEEMKNHQEILKAIQDVTIKREETKKKMEKEKKEFLQKEQDLKAEIEKLCEKGRRLLKEQEEKENKIASLIAEQSDEKQLWEMELDKLKNQHNEINRNILEETERAWKAEILSLESRKELLVLKLEEAEKEAELHLTYLNCACRSAPPTLETMRPKQEWEMRLNRIRMTKESVRDQFNDHIQMVRNGTKLSSLPQIPTPTLPPPPSETDFMLTAFQPNPSLAPRLPFPIGPVPVPMVMPSADPRALSFPLLNPAISRPNQPSPPLPASQGRNSPVVASLIGTHSPHMPPATSIPPPPGLGGVNVTPEFHRPQPADKLEKLLEKLLTRFPQCNKAQLTNILQQIKTARKTMAGLTMEQLNQLVAAKLAEQQEQAAAGAQPLGRIRAPMFSAPLPQISTPVFLPPAQVAYPGTASHTPAACKLCLMCQKLVQPGDLHPMACSHVLHKECIKFWAQTNTNDTCPFCPSLK
SIO_010081: RNF214
subclass of: SO_0000673
so part of: RNF214
location: join(1012167..1012301,1012571..1012710,1013212..1013280,1014088..1014184,1014446..1014534,1014970..1015072,1015465..1015563,1015943..1016319,1016749..1016884,1017115..1017222,1017555..1017650,1018311..1018376)
location: region:1012167-1018376:1
so has part: feature:1012167-1012301:1:exon
so has part: feature:1012571-1012710:1:exon
so has part: feature:1013212-1013280:1:exon
so has part: feature:1014088-1014184:1:exon
so has part: feature:1014446-1014534:1:exon
so has part: feature:1014970-1015072:1:exon
so has part: feature:1015465-1015563:1:exon
so has part: feature:1015943-1016319:1:exon
so has part: feature:1016749-1016884:1:exon
so has part: feature:1017115-1017222:1:exon
so has part: feature:1017555-1017650:1:exon
so has part: feature:1018311-1018376:1:exon

XP_032565438.1
type: Protein
SIO_000068: ncbiprotein

position:1012167:1
position: 1012167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1018376:1
position: 1018376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1012167-1012301:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1012571-1012710:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1013212-1013280:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1014088-1014184:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1014446-1014534:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1014970-1015072:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1015465-1015563:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1015943-1016319:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1016749-1016884:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1017115-1017222:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1017555-1017650:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1018311-1018376:1:exon

BACE1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: BACE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1018825..1027125)
location: region:1018825-1027125:-1
so has part: feature:1018825-1027125:-1:exon
subclass of: SO_0000010

116797729
type: Gene
SIO_000068: ncbigene

position:1018825:-1
position: 1018825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1027125:-1
position: 1027125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1018825-1027125:-1:exon

BACE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: BACE1
product: beta-secretase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 12 long SRA reads, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032709546.1
SIO_010081: BACE1
subclass of: SO_0000673
so part of: BACE1
location: complement(join(1018825..1021614,1021700..1021871,1021984..1022133,1022265..1022366,1022503..1022637,1022728..1022865,1023066..1023282,1023453..1023541,1026803..1027125))
location: region:1018825-1027125:-1
so has part: feature:1026803-1027125:-1:exon
so has part: feature:1023453-1023541:-1:exon
so has part: feature:1023066-1023282:-1:exon
so has part: feature:1022728-1022865:-1:exon
so has part: feature:1022503-1022637:-1:exon
so has part: feature:1022265-1022366:-1:exon
so has part: feature:1021984-1022133:-1:exon
so has part: feature:1021700-1021871:-1:exon
so has part: feature:1018825-1021614:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1026803-1027125:-1:exon

position:1026803:-1
position: 1026803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1023453-1023541:-1:exon

position:1023453:-1
position: 1023453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023541:-1
position: 1023541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1023066-1023282:-1:exon

position:1023066:-1
position: 1023066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023282:-1
position: 1023282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1022728-1022865:-1:exon

position:1022728:-1
position: 1022728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022865:-1
position: 1022865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1022503-1022637:-1:exon

position:1022503:-1
position: 1022503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022637:-1
position: 1022637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1022265-1022366:-1:exon

position:1022265:-1
position: 1022265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022366:-1
position: 1022366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1021984-1022133:-1:exon

position:1021984:-1
position: 1021984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022133:-1
position: 1022133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1021700-1021871:-1:exon

position:1021700:-1
position: 1021700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1021871:-1
position: 1021871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1018825-1021614:-1:exon

position:1021614:-1
position: 1021614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BACE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: BACE1
product: beta-secretase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 11 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032709545.1
SIO_010081: BACE1
subclass of: SO_0000673
so part of: BACE1
location: complement(join(1018825..1021617,1021700..1021871,1021984..1022133,1022265..1022366,1022503..1022637,1022728..1022865,1023066..1023282,1023453..1023541,1026803..1027125))
location: region:1018825-1027125:-1
so has part: feature:1026803-1027125:-1:exon
so has part: feature:1023453-1023541:-1:exon
so has part: feature:1023066-1023282:-1:exon
so has part: feature:1022728-1022865:-1:exon
so has part: feature:1022503-1022637:-1:exon
so has part: feature:1022265-1022366:-1:exon
so has part: feature:1021984-1022133:-1:exon
so has part: feature:1021700-1021871:-1:exon
so has part: feature:1018825-1021617:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1026803-1027125:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1023453-1023541:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1023066-1023282:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1022728-1022865:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1022503-1022637:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1022265-1022366:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1021984-1022133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1021700-1021871:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1018825-1021617:-1:exon

position:1021617:-1
position: 1021617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BACE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: BACE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-secretase 1 isoform X2
translation: MAPAWPWLLLLLWLGVVRALPAPPRIRLPLRGGAAPPSGLRQRRAPLDTEPERAGSFVEMIDNLRGKSGQGYYVEMTVGSPPQKLNILVDTGSSNFAVGAAPHPFLRRYYQRQLSSTYRDLRKGVYVPYTQGKWEGELGTDLVTIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTRVPNIFSLQLCGTGFSPNETEAVASVGGSMIIGGIDRSLYVGDIWYTPIRKEWYYEVIIVKLEVNGQDLNMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKTASSTEKFPDGFWLGEQLVCWQVGTTPWHIFPVLSLYLMGEATNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFRTAAVDGPHLHSNMEDCGYNIPQTDESTLMTIAYVMAAICALFMLPLCLMVFQWRCFRCLRRDHDDFADDISLLK
SIO_010081: BACE1
subclass of: SO_0000673
so part of: BACE1
location: complement(join(1021373..1021614,1021700..1021871,1021984..1022133,1022265..1022366,1022503..1022637,1022728..1022865,1023066..1023282,1023453..1023541,1026803..1027054))
location: region:1021373-1027054:-1
so has part: feature:1026803-1027054:-1:exon
so has part: feature:1023453-1023541:-1:exon
so has part: feature:1023066-1023282:-1:exon
so has part: feature:1022728-1022865:-1:exon
so has part: feature:1022503-1022637:-1:exon
so has part: feature:1022265-1022366:-1:exon
so has part: feature:1021984-1022133:-1:exon
so has part: feature:1021700-1021871:-1:exon
so has part: feature:1021373-1021614:-1:exon

XP_032565437.1
type: Protein
SIO_000068: ncbiprotein

position:1021373:-1
position: 1021373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1027054:-1
position: 1027054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1026803-1027054:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1023453-1023541:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1023066-1023282:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1022728-1022865:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1022503-1022637:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1022265-1022366:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1021984-1022133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1021700-1021871:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1021373-1021614:-1:exon

BACE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: BACE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-secretase 1 isoform X1
translation: MAPAWPWLLLLLWLGVVRALPAPPRIRLPLRGGAAPPSGLRQRRAPLDTEPERAGSFVEMIDNLRGKSGQGYYVEMTVGSPPQKLNILVDTGSSNFAVGAAPHPFLRRYYQRQLSSTYRDLRKGVYVPYTQGKWEGELGTDLVTIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTRVPNIFSLQLCGTGFSPNETEAVASVGGSMIIGGIDRSLYVGDIWYTPIRKEWYYEVIIVKLEVNGQDLNMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKTASSTEKFPDGFWLGEQLVCWQVGTTPWHIFPVLSLYLMGEATNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHAVHDEFRTAAVDGPHLHSNMEDCGYNIPQTDESTLMTIAYVMAAICALFMLPLCLMVFQWRCFRCLRRDHDDFADDISLLK
SIO_010081: BACE1
subclass of: SO_0000673
so part of: BACE1
location: complement(join(1021373..1021617,1021700..1021871,1021984..1022133,1022265..1022366,1022503..1022637,1022728..1022865,1023066..1023282,1023453..1023541,1026803..1027054))
location: region:1021373-1027054:-1
so has part: feature:1026803-1027054:-1:exon
so has part: feature:1023453-1023541:-1:exon
so has part: feature:1023066-1023282:-1:exon
so has part: feature:1022728-1022865:-1:exon
so has part: feature:1022503-1022637:-1:exon
so has part: feature:1022265-1022366:-1:exon
so has part: feature:1021984-1022133:-1:exon
so has part: feature:1021700-1021871:-1:exon
so has part: feature:1021373-1021617:-1:exon

XP_032565436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1026803-1027054:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1023453-1023541:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1023066-1023282:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1022728-1022865:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1022503-1022637:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1022265-1022366:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1021984-1022133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1021700-1021871:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1021373-1021617:-1:exon

CEP164
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: CEP164
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1027470..1059873
location: region:1027470-1059873:1
so has part: feature:1027470-1059873:1:exon
subclass of: SO_0000010

116797727
type: Gene
SIO_000068: ncbigene

position:1027470:1
position: 1027470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1059873:1
position: 1059873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1027470-1059873:1:exon

CEP164
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: CEP164
product: centrosomal protein 164, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032709539.1
SIO_010081: CEP164
subclass of: SO_0000673
so part of: CEP164
location: join(1027470..1027553,1028114..1028269,1029338..1029442,1029751..1029862,1030500..1030728,1032352..1032504,1033605..1033736,1034084..1034161,1036528..1036647,1038883..1039326,1040706..1040783,1041780..1041857,1045031..1045116,1046706..1046852,1048467..1048679,1049831..1049962,1050140..1050356,1050940..1051017,1051278..1051409,1051671..1051793,1051882..1052025,1052240..1052323,1052707..1052775,1053116..1053294,1053642..1053768,1054166..1054233,1054403..1054610,1054952..1055059,1055715..1055829,1056339..1056683,1056874..1056940,1057243..1057359,1058251..1058359,1059609..1059873)
location: region:1027470-1059873:1
so has part: feature:1027470-1027553:1:exon
so has part: feature:1028114-1028269:1:exon
so has part: feature:1029338-1029442:1:exon
so has part: feature:1029751-1029862:1:exon
so has part: feature:1030500-1030728:1:exon
so has part: feature:1032352-1032504:1:exon
so has part: feature:1033605-1033736:1:exon
so has part: feature:1034084-1034161:1:exon
so has part: feature:1036528-1036647:1:exon
so has part: feature:1038883-1039326:1:exon
so has part: feature:1040706-1040783:1:exon
so has part: feature:1041780-1041857:1:exon
so has part: feature:1045031-1045116:1:exon
so has part: feature:1046706-1046852:1:exon
so has part: feature:1048467-1048679:1:exon
so has part: feature:1049831-1049962:1:exon
so has part: feature:1050140-1050356:1:exon
so has part: feature:1050940-1051017:1:exon
so has part: feature:1051278-1051409:1:exon
so has part: feature:1051671-1051793:1:exon
so has part: feature:1051882-1052025:1:exon
so has part: feature:1052240-1052323:1:exon
so has part: feature:1052707-1052775:1:exon
so has part: feature:1053116-1053294:1:exon
so has part: feature:1053642-1053768:1:exon
so has part: feature:1054166-1054233:1:exon
so has part: feature:1054403-1054610:1:exon
so has part: feature:1054952-1055059:1:exon
so has part: feature:1055715-1055829:1:exon
so has part: feature:1056339-1056683:1:exon
so has part: feature:1056874-1056940:1:exon
so has part: feature:1057243-1057359:1:exon
so has part: feature:1058251-1058359:1:exon
so has part: feature:1059609-1059873:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1027470-1027553:1:exon

position:1027553:1
position: 1027553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1028114-1028269:1:exon

position:1028114:1
position: 1028114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1028269:1
position: 1028269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1029338-1029442:1:exon

position:1029338:1
position: 1029338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029442:1
position: 1029442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1029751-1029862:1:exon

position:1029751:1
position: 1029751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029862:1
position: 1029862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1030500-1030728:1:exon

position:1030500:1
position: 1030500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1030728:1
position: 1030728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1032352-1032504:1:exon

position:1032352:1
position: 1032352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1032504:1
position: 1032504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1033605-1033736:1:exon

position:1033605:1
position: 1033605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1033736:1
position: 1033736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1034084-1034161:1:exon