Chiroxiphia lanceolata isolate bChiLan1 chromosome 21, bChiLan1.pri, whole genome shotgun sequence.
type: Entry
definition: Chiroxiphia lanceolata isolate bChiLan1 chromosome 21, bChiLan1.pri, whole genome shotgun sequence.
sequence version: NC_045657.1
sequence date: 2020-02-29
sequence: sequence
division: CON
label: NC_045657.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA603801
dblink: SAMN12620979
keyword: WGS
keyword: RefSeq
source: Chiroxiphia lanceolata (lance-tailed manakin)
organism: Chiroxiphia lanceolata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Pipridae; Chiroxiphia.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020553.1.\nAssembly name: bChiLan1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/01/03. The original whole-genome shotgun project has the\naccession WNMC00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 08-OCT-2019\nAssembly Method :: FALCON v. DNANexus 1.9.0; FALCON-Unzip v.\n DNANexus 1.0.6; purge_haplotigs v.\n v1.0.3+ 1.Nov.2018; scaff10x v. 4.1.0;\n Bionano Solve DLS v. 3.2.1; Salsa HiC v.\n 2.2; Arrow smrtanalysis Pacbio polishing\n & gap filling v. 6.0.0.47841; longranger\n align v. 2.2.2; freebayes Illumina\n polishing v. 1.3.1; gEVAL manual curation\n v. 2019-10-08; VGP assembly pipeline v.\n 1.5\nAssembly Name :: bChiLan1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 67.75x\nSequencing Technology :: PacBio Sequel I CLR; llumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Chiroxiphia lanceolata Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 11781312
topology: linear
so has quality: SO_0000987
location: 1..11781312
location: region:1-11781312:1
RO_0002162: 296741

NC_045657
type: RefSeq
SIO_000068: refseq

PRJNA603801
type: BioProject
SIO_000068: bioproject

SAMN12620979
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11781312:1
position: 11781312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-11781312:1:source
so part of: sequence
organism: Chiroxiphia lanceolata
mol type: genomic DNA
isolate: bChiLan1
chromosome: 21
sex: female
tissue type: isolated red blood cells
dev stage: adult
country: Panama: Isla Boca Btava
lat lon: 8.2166658 N 82.2666656 W
collection date: 14-Apr-2017
collected by: Emily DuVal

296741
type: Taxonomy
SIO_000068: taxonomy

LOC116797176
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116797176
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(24668..25745)
location: region:24668-25745:-1
so has part: feature:24668-25745:-1:exon
subclass of: SO_0000011

116797176
type: Gene
SIO_000068: ncbigene

position:24668:-1
position: 24668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25745:-1
position: 25745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24668-25745:-1:exon

LOC116797176
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116797176
product: uncharacterized LOC116797176, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XR_004360586.1
SIO_010081: LOC116797176
subclass of: SO_0000673
so part of: LOC116797176
location: complement(join(24668..24967,25442..25536,25645..25745))
location: region:24668-25745:-1
so has part: feature:25645-25745:-1:exon
so has part: feature:25442-25536:-1:exon
so has part: feature:24668-24967:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25645-25745:-1:exon

position:25645:-1
position: 25645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:25442-25536:-1:exon

position:25442:-1
position: 25442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25536:-1
position: 25536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:24668-24967:-1:exon

position:24967:-1
position: 24967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116797176
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116797176
product: uncharacterized LOC116797176, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XR_004360585.1
SIO_010081: LOC116797176
subclass of: SO_0000673
so part of: LOC116797176
location: complement(join(24668..24967,25442..25536,25641..25745))
location: region:24668-25745:-1
so has part: feature:25641-25745:-1:exon
so has part: feature:25442-25536:-1:exon
so has part: feature:24668-24967:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25641-25745:-1:exon

position:25641:-1
position: 25641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:25442-25536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:24668-24967:-1:exon

GARNL3
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: GARNL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 30169..74681
location: region:30169-74681:1
so has part: feature:30169-74681:1:exon
subclass of: SO_0000010

116796971
type: Gene
SIO_000068: ncbigene

position:30169:1
position: 30169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74681:1
position: 74681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30169-74681:1:exon

GARNL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: GARNL3
product: GTPase activating Rap/RanGAP domain like 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032708009.1
SIO_010081: GARNL3
subclass of: SO_0000673
so part of: GARNL3
location: join(30169..30355,35597..35666,38000..38074,39509..39608,39961..40079,40706..40770,43196..43259,43507..43533,43916..43991,45786..45884,46407..46510,47686..47794,50093..50138,52592..52698,53545..53666,54427..54531,56994..57068,57996..58107,58849..58947,59518..59634,60278..60450,60762..60920,61651..61717,64345..64452,64878..64996,65420..65555,65835..66044,66353..66464,73593..73704,74520..74681)
location: region:30169-74681:1
so has part: feature:30169-30355:1:exon
so has part: feature:35597-35666:1:exon
so has part: feature:38000-38074:1:exon
so has part: feature:39509-39608:1:exon
so has part: feature:39961-40079:1:exon
so has part: feature:40706-40770:1:exon
so has part: feature:43196-43259:1:exon
so has part: feature:43507-43533:1:exon
so has part: feature:43916-43991:1:exon
so has part: feature:45786-45884:1:exon
so has part: feature:46407-46510:1:exon
so has part: feature:47686-47794:1:exon
so has part: feature:50093-50138:1:exon
so has part: feature:52592-52698:1:exon
so has part: feature:53545-53666:1:exon
so has part: feature:54427-54531:1:exon
so has part: feature:56994-57068:1:exon
so has part: feature:57996-58107:1:exon
so has part: feature:58849-58947:1:exon
so has part: feature:59518-59634:1:exon
so has part: feature:60278-60450:1:exon
so has part: feature:60762-60920:1:exon
so has part: feature:61651-61717:1:exon
so has part: feature:64345-64452:1:exon
so has part: feature:64878-64996:1:exon
so has part: feature:65420-65555:1:exon
so has part: feature:65835-66044:1:exon
so has part: feature:66353-66464:1:exon
so has part: feature:73593-73704:1:exon
so has part: feature:74520-74681:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30169-30355:1:exon

position:30355:1
position: 30355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:35597-35666:1:exon

position:35597:1
position: 35597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35666:1
position: 35666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:38000-38074:1:exon

position:38000:1
position: 38000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38074:1
position: 38074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:39509-39608:1:exon

position:39509:1
position: 39509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39608:1
position: 39608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:39961-40079:1:exon

position:39961:1
position: 39961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40079:1
position: 40079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:40706-40770:1:exon

position:40706:1
position: 40706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40770:1
position: 40770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:43196-43259:1:exon

position:43196:1
position: 43196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43259:1
position: 43259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:43507-43533:1:exon

position:43507:1
position: 43507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43533:1
position: 43533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:43916-43991:1:exon

position:43916:1
position: 43916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43991:1
position: 43991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:45786-45884:1:exon

position:45786:1
position: 45786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45884:1
position: 45884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:46407-46510:1:exon

position:46407:1
position: 46407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46510:1
position: 46510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:47686-47794:1:exon

position:47686:1
position: 47686
reference: sequence
type: ForwardStrandPosition
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position:47794:1
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reference: sequence
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urn:…
SIO_000300: 13
SIO_000628: feature:50093-50138:1:exon

position:50093:1
position: 50093
reference: sequence
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position:50138:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 14
SIO_000628: feature:52592-52698:1:exon

position:52592:1
position: 52592
reference: sequence
type: ForwardStrandPosition
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position:52698:1
position: 52698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:53545-53666:1:exon

position:53545:1
position: 53545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53666:1
position: 53666
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 16
SIO_000628: feature:54427-54531:1:exon

position:54427:1
position: 54427
reference: sequence
type: ForwardStrandPosition
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position:54531:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:56994-57068:1:exon

position:56994:1
position: 56994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57068:1
position: 57068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:57996-58107:1:exon

position:57996:1
position: 57996
reference: sequence
type: ForwardStrandPosition
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position:58107:1
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reference: sequence
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urn:…
SIO_000300: 19
SIO_000628: feature:58849-58947:1:exon

position:58849:1
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reference: sequence
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position:58947:1
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reference: sequence
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urn:…
SIO_000300: 20
SIO_000628: feature:59518-59634:1:exon

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reference: sequence
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position:59634:1
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reference: sequence
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urn:…
SIO_000300: 21
SIO_000628: feature:60278-60450:1:exon

position:60278:1
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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 22
SIO_000628: feature:60762-60920:1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 23
SIO_000628: feature:61651-61717:1:exon

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position:61717:1
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reference: sequence
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urn:…
SIO_000300: 24
SIO_000628: feature:64345-64452:1:exon

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urn:…
SIO_000300: 25
SIO_000628: feature:64878-64996:1:exon

position:64878:1
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reference: sequence
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position:64996:1
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reference: sequence
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urn:…
SIO_000300: 26
SIO_000628: feature:65420-65555:1:exon

position:65420:1
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reference: sequence
type: ForwardStrandPosition
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position:65555:1
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reference: sequence
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urn:…
SIO_000300: 27
SIO_000628: feature:65835-66044:1:exon

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reference: sequence
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position:66044:1
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reference: sequence
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urn:…
SIO_000300: 28
SIO_000628: feature:66353-66464:1:exon

position:66353:1
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reference: sequence
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position:66464:1
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reference: sequence
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urn:…
SIO_000300: 29
SIO_000628: feature:73593-73704:1:exon

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reference: sequence
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position:73704:1
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reference: sequence
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urn:…
SIO_000300: 30
SIO_000628: feature:74520-74681:1:exon

position:74520:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GARNL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: GARNL3
product: GTPase activating Rap/RanGAP domain like 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032708011.1
SIO_010081: GARNL3
subclass of: SO_0000673
so part of: GARNL3
location: join(30169..30355,35597..35666,38000..38074,39509..39608,39961..40079,40706..40770,43196..43259,43507..43533,43916..43991,45786..45884,46407..46510,47686..47794,50093..50138,52592..52698,53545..53666,54427..54531,56994..57068,57996..58107,58849..58947,59518..59634,60278..60450,60762..60920,61651..61717,64345..64452,64878..64996,65420..65555,65835..66044,66353..66464,67792..67901,73593..73670)
location: region:30169-73670:1
so has part: feature:30169-30355:1:exon
so has part: feature:35597-35666:1:exon
so has part: feature:38000-38074:1:exon
so has part: feature:39509-39608:1:exon
so has part: feature:39961-40079:1:exon
so has part: feature:40706-40770:1:exon
so has part: feature:43196-43259:1:exon
so has part: feature:43507-43533:1:exon
so has part: feature:43916-43991:1:exon
so has part: feature:45786-45884:1:exon
so has part: feature:46407-46510:1:exon
so has part: feature:47686-47794:1:exon
so has part: feature:50093-50138:1:exon
so has part: feature:52592-52698:1:exon
so has part: feature:53545-53666:1:exon
so has part: feature:54427-54531:1:exon
so has part: feature:56994-57068:1:exon
so has part: feature:57996-58107:1:exon
so has part: feature:58849-58947:1:exon
so has part: feature:59518-59634:1:exon
so has part: feature:60278-60450:1:exon
so has part: feature:60762-60920:1:exon
so has part: feature:61651-61717:1:exon
so has part: feature:64345-64452:1:exon
so has part: feature:64878-64996:1:exon
so has part: feature:65420-65555:1:exon
so has part: feature:65835-66044:1:exon
so has part: feature:66353-66464:1:exon
so has part: feature:67792-67901:1:exon
so has part: feature:73593-73670:1:exon

position:73670:1
position: 73670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30169-30355:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:35597-35666:1:exon

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SIO_000300: 3
SIO_000628: feature:38000-38074:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:39509-39608:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:39961-40079:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:40706-40770:1:exon

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SIO_000300: 7
SIO_000628: feature:43196-43259:1:exon

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SIO_000300: 8
SIO_000628: feature:43507-43533:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:43916-43991:1:exon

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SIO_000300: 10
SIO_000628: feature:45786-45884:1:exon

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SIO_000300: 11
SIO_000628: feature:46407-46510:1:exon

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SIO_000300: 12
SIO_000628: feature:47686-47794:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:50093-50138:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:52592-52698:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:53545-53666:1:exon

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SIO_000300: 16
SIO_000628: feature:54427-54531:1:exon

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SIO_000300: 17
SIO_000628: feature:56994-57068:1:exon

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SIO_000628: feature:57996-58107:1:exon

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SIO_000300: 19
SIO_000628: feature:58849-58947:1:exon

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SIO_000300: 20
SIO_000628: feature:59518-59634:1:exon

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SIO_000628: feature:60278-60450:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:60762-60920:1:exon

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SIO_000300: 23
SIO_000628: feature:61651-61717:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:64345-64452:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:64878-64996:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:65420-65555:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:65835-66044:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:66353-66464:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:67792-67901:1:exon

position:67792:1
position: 67792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67901:1
position: 67901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:73593-73670:1:exon

GARNL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: GARNL3
product: GTPase activating Rap/RanGAP domain like 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 23 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032708007.1
SIO_010081: GARNL3
subclass of: SO_0000673
so part of: GARNL3
location: join(30169..30355,35597..35666,38000..38074,39509..39608,39961..40079,40706..40770,43196..43259,43507..43533,43916..43991,45786..45884,46407..46510,47686..47794,50093..50138,52592..52698,53545..53666,54427..54531,56994..57068,57996..58107,58849..58947,59518..59634,60278..60450,60762..60920,61651..61717,64345..64452,64878..64996,65420..65555,65835..66044,66353..66464,67197..69164)
location: region:30169-69164:1
so has part: feature:30169-30355:1:exon
so has part: feature:35597-35666:1:exon
so has part: feature:38000-38074:1:exon
so has part: feature:39509-39608:1:exon
so has part: feature:39961-40079:1:exon
so has part: feature:40706-40770:1:exon
so has part: feature:43196-43259:1:exon
so has part: feature:43507-43533:1:exon
so has part: feature:43916-43991:1:exon
so has part: feature:45786-45884:1:exon
so has part: feature:46407-46510:1:exon
so has part: feature:47686-47794:1:exon
so has part: feature:50093-50138:1:exon
so has part: feature:52592-52698:1:exon
so has part: feature:53545-53666:1:exon
so has part: feature:54427-54531:1:exon
so has part: feature:56994-57068:1:exon
so has part: feature:57996-58107:1:exon
so has part: feature:58849-58947:1:exon
so has part: feature:59518-59634:1:exon
so has part: feature:60278-60450:1:exon
so has part: feature:60762-60920:1:exon
so has part: feature:61651-61717:1:exon
so has part: feature:64345-64452:1:exon
so has part: feature:64878-64996:1:exon
so has part: feature:65420-65555:1:exon
so has part: feature:65835-66044:1:exon
so has part: feature:66353-66464:1:exon
so has part: feature:67197-69164:1:exon

position:69164:1
position: 69164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30169-30355:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:35597-35666:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:38000-38074:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:39509-39608:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:39961-40079:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:40706-40770:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43196-43259:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43507-43533:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:43916-43991:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:45786-45884:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:46407-46510:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:47686-47794:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:50093-50138:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:52592-52698:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:53545-53666:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:54427-54531:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:56994-57068:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:57996-58107:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:58849-58947:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:59518-59634:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:60278-60450:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:60762-60920:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:61651-61717:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:64345-64452:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:64878-64996:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:65420-65555:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:65835-66044:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:66353-66464:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:67197-69164:1:exon

position:67197:1
position: 67197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GARNL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: GARNL3
product: GTPase activating Rap/RanGAP domain like 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032708010.1
SIO_010081: GARNL3
subclass of: SO_0000673
so part of: GARNL3
location: join(30169..30355,35597..35666,38000..38074,39509..39608,39961..40079,40706..40770,43196..43259,43507..43533,43916..43991,45786..45884,46407..46510,47686..47794,50093..50138,52592..52698,53545..53666,54427..54531,56994..57068,57996..58107,58849..58947,59518..59634,60278..60450,60762..60920,61651..61717,64345..64452,64878..64996,65420..65555,65835..66044,66353..66464,67792..69164)
location: region:30169-69164:1
so has part: feature:30169-30355:1:exon
so has part: feature:35597-35666:1:exon
so has part: feature:38000-38074:1:exon
so has part: feature:39509-39608:1:exon
so has part: feature:39961-40079:1:exon
so has part: feature:40706-40770:1:exon
so has part: feature:43196-43259:1:exon
so has part: feature:43507-43533:1:exon
so has part: feature:43916-43991:1:exon
so has part: feature:45786-45884:1:exon
so has part: feature:46407-46510:1:exon
so has part: feature:47686-47794:1:exon
so has part: feature:50093-50138:1:exon
so has part: feature:52592-52698:1:exon
so has part: feature:53545-53666:1:exon
so has part: feature:54427-54531:1:exon
so has part: feature:56994-57068:1:exon
so has part: feature:57996-58107:1:exon
so has part: feature:58849-58947:1:exon
so has part: feature:59518-59634:1:exon
so has part: feature:60278-60450:1:exon
so has part: feature:60762-60920:1:exon
so has part: feature:61651-61717:1:exon
so has part: feature:64345-64452:1:exon
so has part: feature:64878-64996:1:exon
so has part: feature:65420-65555:1:exon
so has part: feature:65835-66044:1:exon
so has part: feature:66353-66464:1:exon
so has part: feature:67792-69164:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30169-30355:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:35597-35666:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:38000-38074:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:39509-39608:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:39961-40079:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:40706-40770:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43196-43259:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43507-43533:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:43916-43991:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:45786-45884:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:46407-46510:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:47686-47794:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:50093-50138:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:52592-52698:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:53545-53666:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:54427-54531:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:56994-57068:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:57996-58107:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:58849-58947:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:59518-59634:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:60278-60450:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:60762-60920:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:61651-61717:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:64345-64452:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:64878-64996:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:65420-65555:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:65835-66044:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:66353-66464:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:67792-69164:1:exon

GARNL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: GARNL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTPase-activating Rap/Ran-GAP domain-like protein 3 isoform X3
translation: MELSSAEAASTRFLGLTQRSVSEDLGCRRGDFSRKHYGSVELLISSDADGAIQRAGRFRVENGSSDENTDYTPGTWHRTDVHLENPEYHTRWYFKYFLGKVHQNYIGTDAEKNPFFLSVVLSDQNNQRIPQYHSILWRKTGTQKICLPYSPTKTLSVKSILSAMSLDKFEKSPREIFHPEIQKDLLVLEEQEGSVNFKFGVLYAKDGQLTDDEMFSNETGSESFQRFLHLLGDTVTLKGWTGYRGGLDTKNDTTGTCSIYTIFQGHEIMFHVSTMLPYSRENKQQVERKRHIGNDIVTIVFQEGEESSPAFKPSMIRSHFTHIFALVRYNKQNDSYRLKIFSEESVPLFGPPLPSPPVFTNHQEFRDFVLVKLINGEKATLETPTFSQKRQRTLDMLIRSLYQDMMPDLHRVNNMLNRRSFSDVLPESPKSTRKKEEARQAEFVRLGQALKLKTTVKGDTTAHLATTSFCKKEPWESQSFCSNFPHEVVCADSWGQSLLVSTDAGILLIDDGQPSVQVFDKTLQIKQMHVLEALDLLIARTDKGKDSRLLVFRLSAVQKDIETKQIIRSKYDCRENKLERTKGCHLYAINTHHGSELRIVVAIRNKLLLVTKKYNPHHSLTSSSVLSSPESPVEEFQYIREICLSDPPVVMTLVDGPTGESDNMICVAYRHQFDLVNESTGESYRLHHVETNKVNFVAAIDVYEDGEAGLLLCYNYVCQYRKVYPFSGGSPLIQPSAYDFHFSWNQVPYAVVCAFPYILAFTTDSIEIRLVVNGNLVHTAVVPELQLVASRSDIYFKATAAVSGSSDSSSKEMSSKSSPQTPTAYEKPECPLSSLEGEIPCRNLYKIPLSNLVGRSIERPLKSPLAPKVIATTTSSGIASLPVTHSLSLSRMEIKEIASRTRKELLGLLDEPIPKTESSQKHKKVPRRQSDPKQGAVRSTSSDRCRTSELQIWKEKRQEIKKTGGSIELWITDSICVL
SIO_010081: GARNL3
subclass of: SO_0000673
so part of: GARNL3
location: join(30300..30355,35597..35666,38000..38074,39509..39608,39961..40079,40706..40770,43196..43259,43507..43533,43916..43991,45786..45884,46407..46510,47686..47794,50093..50138,52592..52698,53545..53666,54427..54531,56994..57068,57996..58107,58849..58947,59518..59634,60278..60450,60762..60920,61651..61717,64345..64452,64878..64996,65420..65555,65835..66044,66353..66464,73593..73698)
location: region:30300-73698:1
so has part: feature:30300-30355:1:exon
so has part: feature:35597-35666:1:exon
so has part: feature:38000-38074:1:exon
so has part: feature:39509-39608:1:exon
so has part: feature:39961-40079:1:exon
so has part: feature:40706-40770:1:exon
so has part: feature:43196-43259:1:exon
so has part: feature:43507-43533:1:exon
so has part: feature:43916-43991:1:exon
so has part: feature:45786-45884:1:exon
so has part: feature:46407-46510:1:exon
so has part: feature:47686-47794:1:exon
so has part: feature:50093-50138:1:exon
so has part: feature:52592-52698:1:exon
so has part: feature:53545-53666:1:exon
so has part: feature:54427-54531:1:exon
so has part: feature:56994-57068:1:exon
so has part: feature:57996-58107:1:exon
so has part: feature:58849-58947:1:exon
so has part: feature:59518-59634:1:exon
so has part: feature:60278-60450:1:exon
so has part: feature:60762-60920:1:exon
so has part: feature:61651-61717:1:exon
so has part: feature:64345-64452:1:exon
so has part: feature:64878-64996:1:exon
so has part: feature:65420-65555:1:exon
so has part: feature:65835-66044:1:exon
so has part: feature:66353-66464:1:exon
so has part: feature:73593-73698:1:exon

XP_032563900.1
type: Protein
SIO_000068: ncbiprotein

position:30300:1
position: 30300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73698:1
position: 73698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30300-30355:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:35597-35666:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:38000-38074:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:39509-39608:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:39961-40079:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:40706-40770:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43196-43259:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43507-43533:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:43916-43991:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:45786-45884:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:46407-46510:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:47686-47794:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:50093-50138:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:52592-52698:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:53545-53666:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:54427-54531:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:56994-57068:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:57996-58107:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:58849-58947:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:59518-59634:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:60278-60450:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:60762-60920:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:61651-61717:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:64345-64452:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:64878-64996:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:65420-65555:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:65835-66044:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:66353-66464:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:73593-73698:1:exon

GARNL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: GARNL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTPase-activating Rap/Ran-GAP domain-like protein 3 isoform X4
translation: MELSSAEAASTRFLGLTQRSVSEDLGCRRGDFSRKHYGSVELLISSDADGAIQRAGRFRVENGSSDENTDYTPGTWHRTDVHLENPEYHTRWYFKYFLGKVHQNYIGTDAEKNPFFLSVVLSDQNNQRIPQYHSILWRKTGTQKICLPYSPTKTLSVKSILSAMSLDKFEKSPREIFHPEIQKDLLVLEEQEGSVNFKFGVLYAKDGQLTDDEMFSNETGSESFQRFLHLLGDTVTLKGWTGYRGGLDTKNDTTGTCSIYTIFQGHEIMFHVSTMLPYSRENKQQVERKRHIGNDIVTIVFQEGEESSPAFKPSMIRSHFTHIFALVRYNKQNDSYRLKIFSEESVPLFGPPLPSPPVFTNHQEFRDFVLVKLINGEKATLETPTFSQKRQRTLDMLIRSLYQDMMPDLHRVNNMLNRRSFSDVLPESPKSTRKKEEARQAEFVRLGQALKLKTTVKGDTTAHLATTSFCKKEPWESQSFCSNFPHEVVCADSWGQSLLVSTDAGILLIDDGQPSVQVFDKTLQIKQMHVLEALDLLIARTDKGKDSRLLVFRLSAVQKDIETKQIIRSKYDCRENKLERTKGCHLYAINTHHGSELRIVVAIRNKLLLVTKKYNPHHSLTSSSVLSSPESPVEEFQYIREICLSDPPVVMTLVDGPTGESDNMICVAYRHQFDLVNESTGESYRLHHVETNKVNFVAAIDVYEDGEAGLLLCYNYVCQYRKVYPFSGGSPLIQPSAYDFHFSWNQVPYAVVCAFPYILAFTTDSIEIRLVVNGNLVHTAVVPELQLVASRSDIYFKATAAVSGSSDSSSKEMSSKSSPQTPTAYEKPECPLSSLEGEIPCRNLYKIPLSNLVGRSIERPLKSPLAPKVIATTTSSGIASLPVTHSLSLSRMEIKEIASRTRKELLGLLDEPIPKTESSQKHKKVPRRQSDPKQGAVRSTSSDSLKQNNNKKKEACRQGHFKQCSQSLK
SIO_010081: GARNL3
subclass of: SO_0000673
so part of: GARNL3
location: join(30300..30355,35597..35666,38000..38074,39509..39608,39961..40079,40706..40770,43196..43259,43507..43533,43916..43991,45786..45884,46407..46510,47686..47794,50093..50138,52592..52698,53545..53666,54427..54531,56994..57068,57996..58107,58849..58947,59518..59634,60278..60450,60762..60920,61651..61717,64345..64452,64878..64996,65420..65555,65835..66044,66353..66464,67792..67870)
location: region:30300-67870:1
so has part: feature:30300-30355:1:exon
so has part: feature:35597-35666:1:exon
so has part: feature:38000-38074:1:exon
so has part: feature:39509-39608:1:exon
so has part: feature:39961-40079:1:exon
so has part: feature:40706-40770:1:exon
so has part: feature:43196-43259:1:exon
so has part: feature:43507-43533:1:exon
so has part: feature:43916-43991:1:exon
so has part: feature:45786-45884:1:exon
so has part: feature:46407-46510:1:exon
so has part: feature:47686-47794:1:exon
so has part: feature:50093-50138:1:exon
so has part: feature:52592-52698:1:exon
so has part: feature:53545-53666:1:exon
so has part: feature:54427-54531:1:exon
so has part: feature:56994-57068:1:exon
so has part: feature:57996-58107:1:exon
so has part: feature:58849-58947:1:exon
so has part: feature:59518-59634:1:exon
so has part: feature:60278-60450:1:exon
so has part: feature:60762-60920:1:exon
so has part: feature:61651-61717:1:exon
so has part: feature:64345-64452:1:exon
so has part: feature:64878-64996:1:exon
so has part: feature:65420-65555:1:exon
so has part: feature:65835-66044:1:exon
so has part: feature:66353-66464:1:exon
so has part: feature:67792-67870:1:exon

XP_032563901.1
type: Protein
SIO_000068: ncbiprotein

position:67870:1
position: 67870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30300-30355:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:35597-35666:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:38000-38074:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:39509-39608:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:39961-40079:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:40706-40770:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43196-43259:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43507-43533:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:43916-43991:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:45786-45884:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:46407-46510:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:47686-47794:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:50093-50138:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:52592-52698:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:53545-53666:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:54427-54531:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:56994-57068:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:57996-58107:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:58849-58947:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:59518-59634:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:60278-60450:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:60762-60920:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:61651-61717:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:64345-64452:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:64878-64996:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:65420-65555:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:65835-66044:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:66353-66464:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:67792-67870:1:exon

GARNL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: GARNL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTPase-activating Rap/Ran-GAP domain-like protein 3 isoform X4
translation: MELSSAEAASTRFLGLTQRSVSEDLGCRRGDFSRKHYGSVELLISSDADGAIQRAGRFRVENGSSDENTDYTPGTWHRTDVHLENPEYHTRWYFKYFLGKVHQNYIGTDAEKNPFFLSVVLSDQNNQRIPQYHSILWRKTGTQKICLPYSPTKTLSVKSILSAMSLDKFEKSPREIFHPEIQKDLLVLEEQEGSVNFKFGVLYAKDGQLTDDEMFSNETGSESFQRFLHLLGDTVTLKGWTGYRGGLDTKNDTTGTCSIYTIFQGHEIMFHVSTMLPYSRENKQQVERKRHIGNDIVTIVFQEGEESSPAFKPSMIRSHFTHIFALVRYNKQNDSYRLKIFSEESVPLFGPPLPSPPVFTNHQEFRDFVLVKLINGEKATLETPTFSQKRQRTLDMLIRSLYQDMMPDLHRVNNMLNRRSFSDVLPESPKSTRKKEEARQAEFVRLGQALKLKTTVKGDTTAHLATTSFCKKEPWESQSFCSNFPHEVVCADSWGQSLLVSTDAGILLIDDGQPSVQVFDKTLQIKQMHVLEALDLLIARTDKGKDSRLLVFRLSAVQKDIETKQIIRSKYDCRENKLERTKGCHLYAINTHHGSELRIVVAIRNKLLLVTKKYNPHHSLTSSSVLSSPESPVEEFQYIREICLSDPPVVMTLVDGPTGESDNMICVAYRHQFDLVNESTGESYRLHHVETNKVNFVAAIDVYEDGEAGLLLCYNYVCQYRKVYPFSGGSPLIQPSAYDFHFSWNQVPYAVVCAFPYILAFTTDSIEIRLVVNGNLVHTAVVPELQLVASRSDIYFKATAAVSGSSDSSSKEMSSKSSPQTPTAYEKPECPLSSLEGEIPCRNLYKIPLSNLVGRSIERPLKSPLAPKVIATTTSSGIASLPVTHSLSLSRMEIKEIASRTRKELLGLLDEPIPKTESSQKHKKVPRRQSDPKQGAVRSTSSDSLKQNNNKKKEACRQGHFKQCSQSLK
SIO_010081: GARNL3
subclass of: SO_0000673
so part of: GARNL3
location: join(30300..30355,35597..35666,38000..38074,39509..39608,39961..40079,40706..40770,43196..43259,43507..43533,43916..43991,45786..45884,46407..46510,47686..47794,50093..50138,52592..52698,53545..53666,54427..54531,56994..57068,57996..58107,58849..58947,59518..59634,60278..60450,60762..60920,61651..61717,64345..64452,64878..64996,65420..65555,65835..66044,66353..66464,67792..67870)
location: region:30300-67870:1
so has part: feature:30300-30355:1:exon
so has part: feature:35597-35666:1:exon
so has part: feature:38000-38074:1:exon
so has part: feature:39509-39608:1:exon
so has part: feature:39961-40079:1:exon
so has part: feature:40706-40770:1:exon
so has part: feature:43196-43259:1:exon
so has part: feature:43507-43533:1:exon
so has part: feature:43916-43991:1:exon
so has part: feature:45786-45884:1:exon
so has part: feature:46407-46510:1:exon
so has part: feature:47686-47794:1:exon
so has part: feature:50093-50138:1:exon
so has part: feature:52592-52698:1:exon
so has part: feature:53545-53666:1:exon
so has part: feature:54427-54531:1:exon
so has part: feature:56994-57068:1:exon
so has part: feature:57996-58107:1:exon
so has part: feature:58849-58947:1:exon
so has part: feature:59518-59634:1:exon
so has part: feature:60278-60450:1:exon
so has part: feature:60762-60920:1:exon
so has part: feature:61651-61717:1:exon
so has part: feature:64345-64452:1:exon
so has part: feature:64878-64996:1:exon
so has part: feature:65420-65555:1:exon
so has part: feature:65835-66044:1:exon
so has part: feature:66353-66464:1:exon
so has part: feature:67792-67870:1:exon

XP_032563902.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30300-30355:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:35597-35666:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:38000-38074:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:39509-39608:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:39961-40079:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:40706-40770:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43196-43259:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43507-43533:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:43916-43991:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:45786-45884:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:46407-46510:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:47686-47794:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:50093-50138:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:52592-52698:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:53545-53666:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:54427-54531:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:56994-57068:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:57996-58107:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:58849-58947:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:59518-59634:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:60278-60450:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:60762-60920:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:61651-61717:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:64345-64452:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:64878-64996:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:65420-65555:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:65835-66044:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:66353-66464:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:67792-67870:1:exon

GARNL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: GARNL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTPase-activating Rap/Ran-GAP domain-like protein 3 isoform X1
translation: MELSSAEAASTRFLGLTQRSVSEDLGCRRGDFSRKHYGSVELLISSDADGAIQRAGRFRVENGSSDENTDYTPGTWHRTDVHLENPEYHTRWYFKYFLGKVHQNYIGTDAEKNPFFLSVVLSDQNNQRIPQYHSILWRKTGTQKICLPYSPTKTLSVKSILSAMSLDKFEKSPREIFHPEIQKDLLVLEEQEGSVNFKFGVLYAKDGQLTDDEMFSNETGSESFQRFLHLLGDTVTLKGWTGYRGGLDTKNDTTGTCSIYTIFQGHEIMFHVSTMLPYSRENKQQVERKRHIGNDIVTIVFQEGEESSPAFKPSMIRSHFTHIFALVRYNKQNDSYRLKIFSEESVPLFGPPLPSPPVFTNHQEFRDFVLVKLINGEKATLETPTFSQKRQRTLDMLIRSLYQDMMPDLHRVNNMLNRRSFSDVLPESPKSTRKKEEARQAEFVRLGQALKLKTTVKGDTTAHLATTSFCKKEPWESQSFCSNFPHEVVCADSWGQSLLVSTDAGILLIDDGQPSVQVFDKTLQIKQMHVLEALDLLIARTDKGKDSRLLVFRLSAVQKDIETKQIIRSKYDCRENKLERTKGCHLYAINTHHGSELRIVVAIRNKLLLVTKKYNPHHSLTSSSVLSSPESPVEEFQYIREICLSDPPVVMTLVDGPTGESDNMICVAYRHQFDLVNESTGESYRLHHVETNKVNFVAAIDVYEDGEAGLLLCYNYVCQYRKVYPFSGGSPLIQPSAYDFHFSWNQVPYAVVCAFPYILAFTTDSIEIRLVVNGNLVHTAVVPELQLVASRSDIYFKATAAVSGSSDSSSKEMSSKSSPQTPTAYEKPECPLSSLEGEIPCRNLYKIPLSNLVGRSIERPLKSPLAPKVIATTTSSGIASLPVTHSLSLSRMEIKEIASRTRKELLGLLDEPIPKTESSQKHKKVPRRQSDPKQGAVRSTSSDRIISSSFESYSETRHLSTSSDPDTLAHREGSSPSSYPFQLISLYDEDIIDLK
SIO_010081: GARNL3
subclass of: SO_0000673
so part of: GARNL3
location: join(30300..30355,35597..35666,38000..38074,39509..39608,39961..40079,40706..40770,43196..43259,43507..43533,43916..43991,45786..45884,46407..46510,47686..47794,50093..50138,52592..52698,53545..53666,54427..54531,56994..57068,57996..58107,58849..58947,59518..59634,60278..60450,60762..60920,61651..61717,64345..64452,64878..64996,65420..65555,65835..66044,66353..66464,67197..67353)
location: region:30300-67353:1
so has part: feature:30300-30355:1:exon
so has part: feature:35597-35666:1:exon
so has part: feature:38000-38074:1:exon
so has part: feature:39509-39608:1:exon
so has part: feature:39961-40079:1:exon
so has part: feature:40706-40770:1:exon
so has part: feature:43196-43259:1:exon
so has part: feature:43507-43533:1:exon
so has part: feature:43916-43991:1:exon
so has part: feature:45786-45884:1:exon
so has part: feature:46407-46510:1:exon
so has part: feature:47686-47794:1:exon
so has part: feature:50093-50138:1:exon
so has part: feature:52592-52698:1:exon
so has part: feature:53545-53666:1:exon
so has part: feature:54427-54531:1:exon
so has part: feature:56994-57068:1:exon
so has part: feature:57996-58107:1:exon
so has part: feature:58849-58947:1:exon
so has part: feature:59518-59634:1:exon
so has part: feature:60278-60450:1:exon
so has part: feature:60762-60920:1:exon
so has part: feature:61651-61717:1:exon
so has part: feature:64345-64452:1:exon
so has part: feature:64878-64996:1:exon
so has part: feature:65420-65555:1:exon
so has part: feature:65835-66044:1:exon
so has part: feature:66353-66464:1:exon
so has part: feature:67197-67353:1:exon

XP_032563898.1
type: Protein
SIO_000068: ncbiprotein

position:67353:1
position: 67353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30300-30355:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:35597-35666:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:38000-38074:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:39509-39608:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:39961-40079:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:40706-40770:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43196-43259:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43507-43533:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:43916-43991:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:45786-45884:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:46407-46510:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:47686-47794:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:50093-50138:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:52592-52698:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:53545-53666:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:54427-54531:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:56994-57068:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:57996-58107:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:58849-58947:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:59518-59634:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:60278-60450:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:60762-60920:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:61651-61717:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:64345-64452:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:64878-64996:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:65420-65555:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:65835-66044:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:66353-66464:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:67197-67353:1:exon

GARNL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: GARNL3
product: GTPase activating Rap/RanGAP domain like 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032708008.1
SIO_010081: GARNL3
subclass of: SO_0000673
so part of: GARNL3
location: join(30891..31088,35597..35666,38000..38074,39509..39608,39961..40079,40706..40770,43196..43259,43507..43533,43916..43991,45786..45884,46407..46510,47686..47794,50093..50138,52592..52698,53545..53666,54427..54531,56994..57068,57996..58107,58849..58947,59518..59634,60278..60450,60762..60920,61651..61717,64345..64452,64878..64996,65420..65555,65835..66044,66353..66464,67197..69164)
location: region:30891-69164:1
so has part: feature:30891-31088:1:exon
so has part: feature:35597-35666:1:exon
so has part: feature:38000-38074:1:exon
so has part: feature:39509-39608:1:exon
so has part: feature:39961-40079:1:exon
so has part: feature:40706-40770:1:exon
so has part: feature:43196-43259:1:exon
so has part: feature:43507-43533:1:exon
so has part: feature:43916-43991:1:exon
so has part: feature:45786-45884:1:exon
so has part: feature:46407-46510:1:exon
so has part: feature:47686-47794:1:exon
so has part: feature:50093-50138:1:exon
so has part: feature:52592-52698:1:exon
so has part: feature:53545-53666:1:exon
so has part: feature:54427-54531:1:exon
so has part: feature:56994-57068:1:exon
so has part: feature:57996-58107:1:exon
so has part: feature:58849-58947:1:exon
so has part: feature:59518-59634:1:exon
so has part: feature:60278-60450:1:exon
so has part: feature:60762-60920:1:exon
so has part: feature:61651-61717:1:exon
so has part: feature:64345-64452:1:exon
so has part: feature:64878-64996:1:exon
so has part: feature:65420-65555:1:exon
so has part: feature:65835-66044:1:exon
so has part: feature:66353-66464:1:exon
so has part: feature:67197-69164:1:exon

position:30891:1
position: 30891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30891-31088:1:exon

position:31088:1
position: 31088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:35597-35666:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:38000-38074:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:39509-39608:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:39961-40079:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:40706-40770:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43196-43259:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43507-43533:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:43916-43991:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:45786-45884:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:46407-46510:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:47686-47794:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:50093-50138:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:52592-52698:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:53545-53666:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:54427-54531:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:56994-57068:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:57996-58107:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:58849-58947:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:59518-59634:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:60278-60450:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:60762-60920:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:61651-61717:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:64345-64452:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:64878-64996:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:65420-65555:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:65835-66044:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:66353-66464:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:67197-69164:1:exon

GARNL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: GARNL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTPase-activating Rap/Ran-GAP domain-like protein 3 isoform X2
translation: MGERGAVYLRSVSEDLGCRRGDFSRKHYGSVELLISSDADGAIQRAGRFRVENGSSDENTDYTPGTWHRTDVHLENPEYHTRWYFKYFLGKVHQNYIGTDAEKNPFFLSVVLSDQNNQRIPQYHSILWRKTGTQKICLPYSPTKTLSVKSILSAMSLDKFEKSPREIFHPEIQKDLLVLEEQEGSVNFKFGVLYAKDGQLTDDEMFSNETGSESFQRFLHLLGDTVTLKGWTGYRGGLDTKNDTTGTCSIYTIFQGHEIMFHVSTMLPYSRENKQQVERKRHIGNDIVTIVFQEGEESSPAFKPSMIRSHFTHIFALVRYNKQNDSYRLKIFSEESVPLFGPPLPSPPVFTNHQEFRDFVLVKLINGEKATLETPTFSQKRQRTLDMLIRSLYQDMMPDLHRVNNMLNRRSFSDVLPESPKSTRKKEEARQAEFVRLGQALKLKTTVKGDTTAHLATTSFCKKEPWESQSFCSNFPHEVVCADSWGQSLLVSTDAGILLIDDGQPSVQVFDKTLQIKQMHVLEALDLLIARTDKGKDSRLLVFRLSAVQKDIETKQIIRSKYDCRENKLERTKGCHLYAINTHHGSELRIVVAIRNKLLLVTKKYNPHHSLTSSSVLSSPESPVEEFQYIREICLSDPPVVMTLVDGPTGESDNMICVAYRHQFDLVNESTGESYRLHHVETNKVNFVAAIDVYEDGEAGLLLCYNYVCQYRKVYPFSGGSPLIQPSAYDFHFSWNQVPYAVVCAFPYILAFTTDSIEIRLVVNGNLVHTAVVPELQLVASRSDIYFKATAAVSGSSDSSSKEMSSKSSPQTPTAYEKPECPLSSLEGEIPCRNLYKIPLSNLVGRSIERPLKSPLAPKVIATTTSSGIASLPVTHSLSLSRMEIKEIASRTRKELLGLLDEPIPKTESSQKHKKVPRRQSDPKQGAVRSTSSDRIISSSFESYSETRHLSTSSDPDTLAHREGSSPSSYPFQLISLYDEDIIDLK
SIO_010081: GARNL3
subclass of: SO_0000673
so part of: GARNL3
location: join(31060..31088,35597..35666,38000..38074,39509..39608,39961..40079,40706..40770,43196..43259,43507..43533,43916..43991,45786..45884,46407..46510,47686..47794,50093..50138,52592..52698,53545..53666,54427..54531,56994..57068,57996..58107,58849..58947,59518..59634,60278..60450,60762..60920,61651..61717,64345..64452,64878..64996,65420..65555,65835..66044,66353..66464,67197..67353)
location: region:31060-67353:1
so has part: feature:31060-31088:1:exon
so has part: feature:35597-35666:1:exon
so has part: feature:38000-38074:1:exon
so has part: feature:39509-39608:1:exon
so has part: feature:39961-40079:1:exon
so has part: feature:40706-40770:1:exon
so has part: feature:43196-43259:1:exon
so has part: feature:43507-43533:1:exon
so has part: feature:43916-43991:1:exon
so has part: feature:45786-45884:1:exon
so has part: feature:46407-46510:1:exon
so has part: feature:47686-47794:1:exon
so has part: feature:50093-50138:1:exon
so has part: feature:52592-52698:1:exon
so has part: feature:53545-53666:1:exon
so has part: feature:54427-54531:1:exon
so has part: feature:56994-57068:1:exon
so has part: feature:57996-58107:1:exon
so has part: feature:58849-58947:1:exon
so has part: feature:59518-59634:1:exon
so has part: feature:60278-60450:1:exon
so has part: feature:60762-60920:1:exon
so has part: feature:61651-61717:1:exon
so has part: feature:64345-64452:1:exon
so has part: feature:64878-64996:1:exon
so has part: feature:65420-65555:1:exon
so has part: feature:65835-66044:1:exon
so has part: feature:66353-66464:1:exon
so has part: feature:67197-67353:1:exon

XP_032563899.1
type: Protein
SIO_000068: ncbiprotein

position:31060:1
position: 31060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31060-31088:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:35597-35666:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:38000-38074:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:39509-39608:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:39961-40079:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:40706-40770:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43196-43259:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43507-43533:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:43916-43991:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:45786-45884:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:46407-46510:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:47686-47794:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:50093-50138:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:52592-52698:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:53545-53666:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:54427-54531:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:56994-57068:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:57996-58107:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:58849-58947:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:59518-59634:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:60278-60450:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:60762-60920:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:61651-61717:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:64345-64452:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:64878-64996:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:65420-65555:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:65835-66044:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:66353-66464:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:67197-67353:1:exon

FBXW2
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: FBXW2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 74975..83201
location: region:74975-83201:1
so has part: feature:74975-83201:1:exon
subclass of: SO_0000010

116796976
type: Gene
SIO_000068: ncbigene

position:74975:1
position: 74975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83201:1
position: 83201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74975-83201:1:exon

FBXW2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 296741
gene: FBXW2
product: F-box and WD repeat domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004360552.1
SIO_010081: FBXW2
so part of: FBXW2
location: join(74975..75267,76711..77220,78528..78722,79516..79649,80252..80338,80995..81164,82394..82512,82600..82715)
location: region:74975-82715:1
so has part: feature:74975-75267:1:exon
so has part: feature:76711-77220:1:exon
so has part: feature:78528-78722:1:exon
so has part: feature:79516-79649:1:exon
so has part: feature:80252-80338:1:exon
so has part: feature:80995-81164:1:exon
so has part: feature:82394-82512:1:exon
so has part: feature:82600-82715:1:exon

position:82715:1
position: 82715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74975-75267:1:exon

position:75267:1
position: 75267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:76711-77220:1:exon

position:76711:1
position: 76711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77220:1
position: 77220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:78528-78722:1:exon

position:78528:1
position: 78528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78722:1
position: 78722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:79516-79649:1:exon

position:79516:1
position: 79516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79649:1
position: 79649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:80252-80338:1:exon

position:80252:1
position: 80252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80338:1
position: 80338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:80995-81164:1:exon

position:80995:1
position: 80995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81164:1
position: 81164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:82394-82512:1:exon

position:82394:1
position: 82394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82512:1
position: 82512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:82600-82715:1:exon

position:82600:1
position: 82600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FBXW2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: FBXW2
product: F-box and WD repeat domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 16 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_032708026.1
SIO_010081: FBXW2
subclass of: SO_0000673
so part of: FBXW2
location: join(74978..75267,76711..77220,78528..78722,79516..79649,80252..80338,80995..81164,82600..83201)
location: region:74978-83201:1
so has part: feature:74978-75267:1:exon
so has part: feature:76711-77220:1:exon
so has part: feature:78528-78722:1:exon
so has part: feature:79516-79649:1:exon
so has part: feature:80252-80338:1:exon
so has part: feature:80995-81164:1:exon
so has part: feature:82600-83201:1:exon

position:74978:1
position: 74978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74978-75267:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:76711-77220:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78528-78722:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:79516-79649:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:80252-80338:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:80995-81164:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:82600-83201:1:exon

FBXW2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: FBXW2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 2
translation: MEKKDFEAWLDNISITFLSLTDLQKNETLDHLISLSGAVQLRHLSNNLEILLKRDFLKLLPLELSFYLLKWLDPQTLLTCCLVSKQWNKVISACTEVWQTACKNLGWQIDDSVQDPLHWKKVYLKAILRMKQLKDHEAFETSSLIGHSARVYALYYKDGLLCTGSDDLSAKLWDVSTGQCIYGIQTHTCAAVKFDEQKLVTGSFDNTVACWEWSSGAKTQHFRGHTGAVFSVDYSDELDVLVSGSADFTVKVWALSTGTCLNTLTGHTEWVTKVVLQKCKVKSLMHSPGDHILLSADKYEIKIWPIGREINCKCLKTLSVSEDRSISLQPRLHFDGKYIVCSSALGLYQWDFASYDILRVIKPPDFLNVSLLGFGEIFALLFDNRYLYIMDLRTEKLISRWPLPEYRKSKRGSSFLAGEMSWLNGLNGQNDTGLVFATSMPDHSIHLVLWKEHG
SIO_010081: FBXW2
subclass of: SO_0000673
so part of: FBXW2
location: join(76731..77220,78528..78722,79516..79649,80252..80338,80995..81164,82600..82888)
location: region:76731-82888:1
so has part: feature:76731-77220:1:exon
so has part: feature:78528-78722:1:exon
so has part: feature:79516-79649:1:exon
so has part: feature:80252-80338:1:exon
so has part: feature:80995-81164:1:exon
so has part: feature:82600-82888:1:exon

XP_032563917.1
type: Protein
SIO_000068: ncbiprotein

position:76731:1
position: 76731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82888:1
position: 82888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76731-77220:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78528-78722:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:79516-79649:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:80252-80338:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:80995-81164:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:82600-82888:1:exon

LOC116796975
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116796975
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(83983..103733)
location: region:83983-103733:-1
so has part: feature:83983-103733:-1:exon
subclass of: SO_0000010

116796975
type: Gene
SIO_000068: ncbigene

position:83983:-1
position: 83983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103733:-1
position: 103733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83983-103733:-1:exon

LOC116796975
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116796975
product: uncharacterized LOC116796975, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032708017.1
SIO_010081: LOC116796975
subclass of: SO_0000673
so part of: LOC116796975
location: complement(join(83983..88130,99905..100037,101330..101922,102005..102117))
location: region:83983-102117:-1
so has part: feature:102005-102117:-1:exon
so has part: feature:101330-101922:-1:exon
so has part: feature:99905-100037:-1:exon
so has part: feature:83983-88130:-1:exon

position:102117:-1
position: 102117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102005-102117:-1:exon

position:102005:-1
position: 102005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:101330-101922:-1:exon

position:101330:-1
position: 101330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101922:-1
position: 101922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:99905-100037:-1:exon

position:99905:-1
position: 99905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100037:-1
position: 100037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:83983-88130:-1:exon

position:88130:-1
position: 88130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116796975
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116796975
product: uncharacterized LOC116796975, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032708019.1
SIO_010081: LOC116796975
subclass of: SO_0000673
so part of: LOC116796975
location: complement(join(83983..88130,88291..88377,95824..95845))
location: region:83983-95845:-1
so has part: feature:95824-95845:-1:exon
so has part: feature:88291-88377:-1:exon
so has part: feature:83983-88130:-1:exon

position:95845:-1
position: 95845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95824-95845:-1:exon

position:95824:-1
position: 95824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:88291-88377:-1:exon

position:88291:-1
position: 88291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88377:-1
position: 88377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:83983-88130:-1:exon

LOC116796975
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116796975
product: uncharacterized LOC116796975, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032708022.1
SIO_010081: LOC116796975
subclass of: SO_0000673
so part of: LOC116796975
location: complement(join(83983..88130,94002..94160))
location: region:83983-94160:-1
so has part: feature:94002-94160:-1:exon
so has part: feature:83983-88130:-1:exon

position:94160:-1
position: 94160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94002-94160:-1:exon

position:94002:-1
position: 94002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:83983-88130:-1:exon

LOC116796975
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116796975
product: uncharacterized LOC116796975, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032708018.1
SIO_010081: LOC116796975
subclass of: SO_0000673
so part of: LOC116796975
location: complement(join(83983..88130,88291..88377,90389..94097))
location: region:83983-94097:-1
so has part: feature:90389-94097:-1:exon
so has part: feature:88291-88377:-1:exon
so has part: feature:83983-88130:-1:exon

position:94097:-1
position: 94097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90389-94097:-1:exon

position:90389:-1
position: 90389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:88291-88377:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:83983-88130:-1:exon

LOC116796975
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116796975
product: uncharacterized LOC116796975, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032708023.1
SIO_010081: LOC116796975
subclass of: SO_0000673
so part of: LOC116796975
location: complement(join(83983..88130,90486..94096))
location: region:83983-94096:-1
so has part: feature:90486-94096:-1:exon
so has part: feature:83983-88130:-1:exon

position:94096:-1
position: 94096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90486-94096:-1:exon

position:90486:-1
position: 90486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:83983-88130:-1:exon

LOC116796975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116796975
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116796975 isoform X1
translation: MGNTQGCEVSHFSGSRIGALESVKYYTMRLETMWQHKVQGQRNLHPPLDKFRMLCGRKKSYFVAAVCIITLTSVVTVSYLRLQRLSRQPKVIQEGSKCRGEIANSTITPLKDNRTFIISPYFDDRESKVTRVIGIVHHEDVKQLYCWFCCQPNGKIYVSNAKIDVHSDRFGFPYGAADIVCLEPENCDPTHVSIHPFAHGNIDQLPRFEIKNRKPEPFSVDFTVCISAMFGNYNNVLQFIQSLEMYKILGAQKVVIYKNNCSHLMEKVLKFYIEEGTVEIIPWPINSHLKVSSRWHFMQDGTHIGYYGQITALNDCIYRNMQRSRFVVLNDADEIILPLKHPNWKTMMSSLQEQNPGTGIFLFENHIFPETISTHMFNISSWNTVPGVNILQHVHREPDRKDVINPRKMIVDPQKVIQTSVHSVLHAYGDSVNVPMDVALIYHCRKPLQRDLPRESLVRDTALWRYNSSLIMNVNKVLSETIL
SIO_010081: LOC116796975
subclass of: SO_0000673
so part of: LOC116796975
location: complement(join(86775..88130,99905..100000))
location: region:86775-100000:-1
so has part: feature:99905-100000:-1:exon
so has part: feature:86775-88130:-1:exon

XP_032563908.1
type: Protein
SIO_000068: ncbiprotein

position:86775:-1
position: 86775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100000:-1
position: 100000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99905-100000:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86775-88130:-1:exon

LOC116796975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116796975
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116796975 isoform X5
translation: MMWQHKVQGQRNLHPPLDKFRMLCGRKKSYFVAAVCIITLTSVVTVSYLRLQRLSRQPKVIQEGSKCRGEIANSTITPLKDNRTFIISPYFDDRESKVTRVIGIVHHEDVKQLYCWFCCQPNGKIYVSNAKIDVHSDRFGFPYGAADIVCLEPENCDPTHVSIHPFAHGNIDQLPRFEIKNRKPEPFSVDFTVCISAMFGNYNNVLQFIQSLEMYKILGAQKVVIYKNNCSHLMEKVLKFYIEEGTVEIIPWPINSHLKVSSRWHFMQDGTHIGYYGQITALNDCIYRNMQRSRFVVLNDADEIILPLKHPNWKTMMSSLQEQNPGTGIFLFENHIFPETISTHMFNISSWNTVPGVNILQHVHREPDRKDVINPRKMIVDPQKVIQTSVHSVLHAYGDSVNVPMDVALIYHCRKPLQRDLPRESLVRDTALWRYNSSLIMNVNKVLSETIL
SIO_010081: LOC116796975
subclass of: SO_0000673
so part of: LOC116796975
location: complement(join(86775..88130,94002..94004))
location: region:86775-94004:-1
so has part: feature:94002-94004:-1:exon
so has part: feature:86775-88130:-1:exon

XP_032563913.1
type: Protein
SIO_000068: ncbiprotein

position:94004:-1
position: 94004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94002-94004:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86775-88130:-1:exon

LOC116796975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116796975
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116796975 isoform X2
translation: MEAFRVSRAVSSIPLKMWQHKVQGQRNLHPPLDKFRMLCGRKKSYFVAAVCIITLTSVVTVSYLRLQRLSRQPKVIQEGSKCRGEIANSTITPLKDNRTFIISPYFDDRESKVTRVIGIVHHEDVKQLYCWFCCQPNGKIYVSNAKIDVHSDRFGFPYGAADIVCLEPENCDPTHVSIHPFAHGNIDQLPRFEIKNRKPEPFSVDFTVCISAMFGNYNNVLQFIQSLEMYKILGAQKVVIYKNNCSHLMEKVLKFYIEEGTVEIIPWPINSHLKVSSRWHFMQDGTHIGYYGQITALNDCIYRNMQRSRFVVLNDADEIILPLKHPNWKTMMSSLQEQNPGTGIFLFENHIFPETISTHMFNISSWNTVPGVNILQHVHREPDRKDVINPRKMIVDPQKVIQTSVHSVLHAYGDSVNVPMDVALIYHCRKPLQRDLPRESLVRDTALWRYNSSLIMNVNKVLSETIL
SIO_010081: LOC116796975
subclass of: SO_0000673
so part of: LOC116796975
location: complement(join(86775..88130,88291..88338))
location: region:86775-88338:-1
so has part: feature:88291-88338:-1:exon
so has part: feature:86775-88130:-1:exon

XP_032563909.1
type: Protein
SIO_000068: ncbiprotein

position:88338:-1
position: 88338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88291-88338:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86775-88130:-1:exon

LOC116796975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116796975
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116796975 isoform X2
translation: MEAFRVSRAVSSIPLKMWQHKVQGQRNLHPPLDKFRMLCGRKKSYFVAAVCIITLTSVVTVSYLRLQRLSRQPKVIQEGSKCRGEIANSTITPLKDNRTFIISPYFDDRESKVTRVIGIVHHEDVKQLYCWFCCQPNGKIYVSNAKIDVHSDRFGFPYGAADIVCLEPENCDPTHVSIHPFAHGNIDQLPRFEIKNRKPEPFSVDFTVCISAMFGNYNNVLQFIQSLEMYKILGAQKVVIYKNNCSHLMEKVLKFYIEEGTVEIIPWPINSHLKVSSRWHFMQDGTHIGYYGQITALNDCIYRNMQRSRFVVLNDADEIILPLKHPNWKTMMSSLQEQNPGTGIFLFENHIFPETISTHMFNISSWNTVPGVNILQHVHREPDRKDVINPRKMIVDPQKVIQTSVHSVLHAYGDSVNVPMDVALIYHCRKPLQRDLPRESLVRDTALWRYNSSLIMNVNKVLSETIL
SIO_010081: LOC116796975
subclass of: SO_0000673
so part of: LOC116796975
location: complement(join(86775..88130,88291..88338))
location: region:86775-88338:-1
so has part: feature:88291-88338:-1:exon
so has part: feature:86775-88130:-1:exon

XP_032563910.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88291-88338:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86775-88130:-1:exon

LOC116796975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116796975
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116796975 isoform X6
translation: MWQHKVQGQRNLHPPLDKFRMLCGRKKSYFVAAVCIITLTSVVTVSYLRLQRLSRQPKVIQEGSKCRGEIANSTITPLKDNRTFIISPYFDDRESKVTRVIGIVHHEDVKQLYCWFCCQPNGKIYVSNAKIDVHSDRFGFPYGAADIVCLEPENCDPTHVSIHPFAHGNIDQLPRFEIKNRKPEPFSVDFTVCISAMFGNYNNVLQFIQSLEMYKILGAQKVVIYKNNCSHLMEKVLKFYIEEGTVEIIPWPINSHLKVSSRWHFMQDGTHIGYYGQITALNDCIYRNMQRSRFVVLNDADEIILPLKHPNWKTMMSSLQEQNPGTGIFLFENHIFPETISTHMFNISSWNTVPGVNILQHVHREPDRKDVINPRKMIVDPQKVIQTSVHSVLHAYGDSVNVPMDVALIYHCRKPLQRDLPRESLVRDTALWRYNSSLIMNVNKVLSETIL
SIO_010081: LOC116796975
subclass of: SO_0000673
so part of: LOC116796975
location: complement(86775..88130)
location: region:86775-88130:-1
so has part: feature:86775-88130:-1:exon

XP_032563914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86775-88130:-1:exon

LOC116796975
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116796975
product: uncharacterized LOC116796975, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032708021.1
SIO_010081: LOC116796975
subclass of: SO_0000673
so part of: LOC116796975
location: complement(join(87982..88130,95824..97200,101330..101415,102138..103733))
location: region:87982-103733:-1
so has part: feature:102138-103733:-1:exon
so has part: feature:101330-101415:-1:exon
so has part: feature:95824-97200:-1:exon
so has part: feature:87982-88130:-1:exon

position:87982:-1
position: 87982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102138-103733:-1:exon

position:102138:-1
position: 102138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:101330-101415:-1:exon

position:101415:-1
position: 101415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:95824-97200:-1:exon

position:97200:-1
position: 97200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:87982-88130:-1:exon

LOC116796975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116796975
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116796975 isoform X4
translation: MIHCGKKHICAVVACIVIFASILICYWKDLQLPNTITRKIFPQATTASPAGQLCRGKIAQNAITPLKDNRTFIISPYFDDRESKVTRVIGIVHHEDVKQLYCWFCCQPNGKIYVSNAKIDVHSDRFGFPYGAADIVCLEPENCDPTHVSIHPFAHGNIDQLPRFEIKNRKPEPFSVDFTVCISAMFGNYNNVLQFIQSLEMYKILGAQKVVIYKNNCSHLMEKVLKFYIEEGTVEIIPWPINSHLKVSSKWHFSMDAKDIGYYGQITALNDCIYRNMQRSRFVVLNDADEIILPLKHPNWKTMMSSLQEQNPGTGIFLFENHIFPETISTHMFNISSWNTVPGVNILQHVHREPDRKDVFNPRKMIVDPQKVIQTSVHSVLHAYGDSVNVPMDVALIYHCRKPLQRDLPRESLVRDTALWRYNSSLIMNVNKVLSETILCGNIKYKDKETYIHL
SIO_010081: LOC116796975
subclass of: SO_0000673
so part of: LOC116796975
location: complement(join(88082..88130,95824..97139))
location: region:88082-97139:-1
so has part: feature:95824-97139:-1:exon
so has part: feature:88082-88130:-1:exon

XP_032563912.1
type: Protein
SIO_000068: ncbiprotein

position:88082:-1
position: 88082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97139:-1
position: 97139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95824-97139:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:88082-88130:-1:exon

LOC116796975
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116796975
product: uncharacterized LOC116796975, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032708020.1
SIO_010081: LOC116796975
subclass of: SO_0000673
so part of: LOC116796975
location: complement(join(88153..88377,95824..97200,101330..101415,102138..103733))
location: region:88153-103733:-1
so has part: feature:102138-103733:-1:exon
so has part: feature:101330-101415:-1:exon
so has part: feature:95824-97200:-1:exon
so has part: feature:88153-88377:-1:exon

position:88153:-1
position: 88153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102138-103733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:101330-101415:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:95824-97200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:88153-88377:-1:exon

LOC116796975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116796975
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116796975 isoform X3
translation: MIHCGKKHICAVVACIVIFASILICYWKDLQLPNTITRKIFPQATTASPAGQLCRGKIAQNAITPLKDNRTFIISPYFDDRESKVTRVIGIVHHEDVKQLYCWFCCQPNGKIYVSNAKIDVHSDRFGFPYGAADIVCLEPENCDPTHVSIHPFAHGNIDQLPRFEIKNRKPEPFSVDFTVCISAMFGNYNNVLQFIQSLEMYKILGAQKVVIYKNNCSHLMEKVLKFYIEEGTVEIIPWPINSHLKVSSKWHFSMDAKDIGYYGQITALNDCIYRNMQRSRFVVLNDADEIILPLKHPNWKTMMSSLQEQNPGTGIFLFENHIFPETISTHMFNISSWNTVPGVNILQHVHREPDRKDVFNPRKMIVDPQKVIQTSVHSVLHAYGDSVNVPMDVALIYHCRKPLQRDLPRESLVRDTALWRYNSSLIMNVNKVLSETILPLHVQKLLHTPDKWRHSECHVQYHPYH
SIO_010081: LOC116796975
subclass of: SO_0000673
so part of: LOC116796975
location: complement(join(88293..88377,95824..97139))
location: region:88293-97139:-1
so has part: feature:95824-97139:-1:exon
so has part: feature:88293-88377:-1:exon

XP_032563911.1
type: Protein
SIO_000068: ncbiprotein

position:88293:-1
position: 88293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95824-97139:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:88293-88377:-1:exon

LOC116796975
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116796975
product: uncharacterized LOC116796975, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032708024.1
SIO_010081: LOC116796975
subclass of: SO_0000673
so part of: LOC116796975
location: complement(join(95068..95487,95824..97200,101330..101415,102138..103733))
location: region:95068-103733:-1
so has part: feature:102138-103733:-1:exon
so has part: feature:101330-101415:-1:exon
so has part: feature:95824-97200:-1:exon
so has part: feature:95068-95487:-1:exon

position:95068:-1
position: 95068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102138-103733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:101330-101415:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:95824-97200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95068-95487:-1:exon

position:95487:-1
position: 95487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116796975
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116796975
product: uncharacterized LOC116796975, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032708025.1
SIO_010081: LOC116796975
subclass of: SO_0000673
so part of: LOC116796975
location: complement(join(95068..97200,99905..100037,101330..101415,102138..103733))
location: region:95068-103733:-1
so has part: feature:102138-103733:-1:exon
so has part: feature:101330-101415:-1:exon
so has part: feature:99905-100037:-1:exon
so has part: feature:95068-97200:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:102138-103733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:101330-101415:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99905-100037:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95068-97200:-1:exon

LOC116796975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116796975
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116796975 isoform X7
translation: MIHCGKKHICAVVACIVIFASILICYWKDLQLPNTITRKIFPQATTASPAGQLCRGKIAQNAITPLKDNRTFIISPYFDDRESKVTRVIGIVHHEDVKQLYCWFCCQPNGKIYVSNAKIDVHSDRFGFPYGAADIVCLEPENCDPTHVSIHPFAHGNIDQLPRFEIKNRKPEPFSVDFTVCISAMFGNYNNVLQFIQSLEMYKILGAQKVVIYKNNCSHLMEKVLKFYIEEGTVEIIPWPINSHLKVSSKWHFSMDAKDIGYYGQITALNDCIYRNMQRSRFVVLNDADEIILPLKHPNWKTMMSSLQEQNPGTGIFLFENHIFPETISTHMFNISSWNTVPGVNILQHVHREPDRKDVFNPRKMIVDPQKVIQTSVHSVLHAYGDSVNVPMDVALIYHCRKPLQRDLPRESLVRDTALWRYNSSLIMNVNKVLSETILKLV
SIO_010081: LOC116796975
subclass of: SO_0000673
so part of: LOC116796975
location: complement(join(95475..95487,95824..97139))
location: region:95475-97139:-1
so has part: feature:95824-97139:-1:exon
so has part: feature:95475-95487:-1:exon

XP_032563915.1
type: Protein
SIO_000068: ncbiprotein

position:95475:-1
position: 95475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95824-97139:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:95475-95487:-1:exon

LOC116796975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116796975
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116796975 isoform X8
translation: MIHCGKKHICAVVACIVIFASILICYWKDLQLPNTITRKIFPQATTASPAGQLCRGKIAQNAITPLKDNRTFIISPYFDDRESKVTRVIGIVHHEDVKQLYCWFCCQPNGKIYVSNAKIDVHSDRFGFPYGAADIVCLEPENCDPTHVSIHPFAHGNIDQLPRFEIKNRKPEPFSVDFTVCISAMFGNYNNVLQFIQSLEMYKILGAQKVVIYKNNCSHLMEKVLKFYIEEGTVEIIPWPINSHLKVSSKWHFSMDAKDIGYYGQITALNDCIYRNMQRSRFVVLNDADEIILPLKHPNWKTMMSSLQEQNPGTGIFLFENHIFPETISTHMFNISSWNTVPGVNILQHVHREPDRKDVFNPRKMIVDPQKVIQTSVHSVLHAYGDSVNVPMDVALIYHCRKPLQRDLPRESLVRDTALWRYNSSLIMNVNKVLSETIL
SIO_010081: LOC116796975
subclass of: SO_0000673
so part of: LOC116796975
location: complement(95820..97139)
location: region:95820-97139:-1
so has part: feature:95820-97139:-1:exon

XP_032563916.1
type: Protein
SIO_000068: ncbiprotein

position:95820:-1
position: 95820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95820-97139:-1:exon

LOC116796975
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 296741
gene: LOC116796975
product: uncharacterized LOC116796975, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004360551.1
SIO_010081: LOC116796975
so part of: LOC116796975
location: complement(join(96785..96897,101330..102122))
location: region:96785-102122:-1
so has part: feature:101330-102122:-1:exon
so has part: feature:96785-96897:-1:exon

position:96785:-1
position: 96785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102122:-1
position: 102122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101330-102122:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:96785-96897:-1:exon

position:96897:-1
position: 96897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RALGPS1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: RALGPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(105011..183062)
location: region:105011-183062:-1
so has part: feature:105011-183062:-1:exon
subclass of: SO_0000010

116796972
type: Gene
SIO_000068: ncbigene

position:105011:-1
position: 105011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183062:-1
position: 183062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105011-183062:-1:exon

RALGPS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: RALGPS1
product: Ral GEF with PH domain and SH3 binding motif 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032708012.1
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(105011..108689,109038..109129,110125..110230,110406..110498,111576..111681,113807..113887,114176..114227,115434..115585,116462..116588,128360..128427,132365..132458,134124..134261,165751..165877,166880..166972,168424..168513,168988..169071,172013..172063,173914..174021,175612..175734,177644..177739,180538..180654,182889..183062))
location: region:105011-183062:-1
so has part: feature:182889-183062:-1:exon
so has part: feature:180538-180654:-1:exon
so has part: feature:177644-177739:-1:exon
so has part: feature:175612-175734:-1:exon
so has part: feature:173914-174021:-1:exon
so has part: feature:172013-172063:-1:exon
so has part: feature:168988-169071:-1:exon
so has part: feature:168424-168513:-1:exon
so has part: feature:166880-166972:-1:exon
so has part: feature:165751-165877:-1:exon
so has part: feature:134124-134261:-1:exon
so has part: feature:132365-132458:-1:exon
so has part: feature:128360-128427:-1:exon
so has part: feature:116462-116588:-1:exon
so has part: feature:115434-115585:-1:exon
so has part: feature:114176-114227:-1:exon
so has part: feature:113807-113887:-1:exon
so has part: feature:111576-111681:-1:exon
so has part: feature:110406-110498:-1:exon
so has part: feature:110125-110230:-1:exon
so has part: feature:109038-109129:-1:exon
so has part: feature:105011-108689:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:182889-183062:-1:exon

position:182889:-1
position: 182889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:180538-180654:-1:exon

position:180538:-1
position: 180538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180654:-1
position: 180654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:177644-177739:-1:exon

position:177644:-1
position: 177644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177739:-1
position: 177739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:175612-175734:-1:exon

position:175612:-1
position: 175612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175734:-1
position: 175734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:173914-174021:-1:exon

position:173914:-1
position: 173914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174021:-1
position: 174021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:172013-172063:-1:exon

position:172013:-1
position: 172013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172063:-1
position: 172063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:168988-169071:-1:exon

position:168988:-1
position: 168988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169071:-1
position: 169071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:168424-168513:-1:exon

position:168424:-1
position: 168424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168513:-1
position: 168513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:166880-166972:-1:exon

position:166880:-1
position: 166880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166972:-1
position: 166972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:165751-165877:-1:exon

position:165751:-1
position: 165751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165877:-1
position: 165877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:134124-134261:-1:exon

position:134124:-1
position: 134124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134261:-1
position: 134261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:132365-132458:-1:exon

position:132365:-1
position: 132365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132458:-1
position: 132458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:128360-128427:-1:exon

position:128360:-1
position: 128360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128427:-1
position: 128427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:116462-116588:-1:exon

position:116462:-1
position: 116462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116588:-1
position: 116588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:115434-115585:-1:exon

position:115434:-1
position: 115434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115585:-1
position: 115585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:114176-114227:-1:exon

position:114176:-1
position: 114176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114227:-1
position: 114227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:113807-113887:-1:exon

position:113807:-1
position: 113807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113887:-1
position: 113887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:111576-111681:-1:exon

position:111576:-1
position: 111576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111681:-1
position: 111681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:110406-110498:-1:exon

position:110406:-1
position: 110406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110498:-1
position: 110498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:110125-110230:-1:exon

position:110125:-1
position: 110125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110230:-1
position: 110230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:109038-109129:-1:exon

position:109038:-1
position: 109038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109129:-1
position: 109129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:105011-108689:-1:exon

position:108689:-1
position: 108689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RALGPS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: RALGPS1
product: Ral GEF with PH domain and SH3 binding motif 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032708013.1
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(105011..108689,109038..109129,110125..110230,110406..110498,111576..111681,113807..113887,114176..114227,115434..115585,116462..116588,128360..128427,132365..132458,134124..134261,165751..165877,166880..166972,168424..168513,168988..169071,172013..172063,173914..174021,175612..175734,177644..177734,180538..180654,182889..183051))
location: region:105011-183051:-1
so has part: feature:182889-183051:-1:exon
so has part: feature:180538-180654:-1:exon
so has part: feature:177644-177734:-1:exon
so has part: feature:175612-175734:-1:exon
so has part: feature:173914-174021:-1:exon
so has part: feature:172013-172063:-1:exon
so has part: feature:168988-169071:-1:exon
so has part: feature:168424-168513:-1:exon
so has part: feature:166880-166972:-1:exon
so has part: feature:165751-165877:-1:exon
so has part: feature:134124-134261:-1:exon
so has part: feature:132365-132458:-1:exon
so has part: feature:128360-128427:-1:exon
so has part: feature:116462-116588:-1:exon
so has part: feature:115434-115585:-1:exon
so has part: feature:114176-114227:-1:exon
so has part: feature:113807-113887:-1:exon
so has part: feature:111576-111681:-1:exon
so has part: feature:110406-110498:-1:exon
so has part: feature:110125-110230:-1:exon
so has part: feature:109038-109129:-1:exon
so has part: feature:105011-108689:-1:exon

position:183051:-1
position: 183051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182889-183051:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:180538-180654:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:177644-177734:-1:exon

position:177734:-1
position: 177734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:175612-175734:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:173914-174021:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:172013-172063:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:168988-169071:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:168424-168513:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:166880-166972:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:165751-165877:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:134124-134261:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:132365-132458:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:128360-128427:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:116462-116588:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:115434-115585:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:114176-114227:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:113807-113887:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:111576-111681:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:110406-110498:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:110125-110230:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:109038-109129:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:105011-108689:-1:exon

RALGPS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: RALGPS1
product: Ral GEF with PH domain and SH3 binding motif 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032708014.1
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(105011..108689,109038..109129,110125..110230,110406..110498,111576..111681,113807..113887,114176..114227,115434..115585,116462..116588,128360..128427,132365..132458,134124..134261,165751..165877,166880..166972,168424..168513,168988..169071,172013..172063,172313..172414,173914..174023))
location: region:105011-174023:-1
so has part: feature:173914-174023:-1:exon
so has part: feature:172313-172414:-1:exon
so has part: feature:172013-172063:-1:exon
so has part: feature:168988-169071:-1:exon
so has part: feature:168424-168513:-1:exon
so has part: feature:166880-166972:-1:exon
so has part: feature:165751-165877:-1:exon
so has part: feature:134124-134261:-1:exon
so has part: feature:132365-132458:-1:exon
so has part: feature:128360-128427:-1:exon
so has part: feature:116462-116588:-1:exon
so has part: feature:115434-115585:-1:exon
so has part: feature:114176-114227:-1:exon
so has part: feature:113807-113887:-1:exon
so has part: feature:111576-111681:-1:exon
so has part: feature:110406-110498:-1:exon
so has part: feature:110125-110230:-1:exon
so has part: feature:109038-109129:-1:exon
so has part: feature:105011-108689:-1:exon

position:174023:-1
position: 174023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173914-174023:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:172313-172414:-1:exon

position:172313:-1
position: 172313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172414:-1
position: 172414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:172013-172063:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:168988-169071:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:168424-168513:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:166880-166972:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:165751-165877:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:134124-134261:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:132365-132458:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:128360-128427:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:116462-116588:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:115434-115585:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:114176-114227:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:113807-113887:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:111576-111681:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:110406-110498:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:110125-110230:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:109038-109129:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:105011-108689:-1:exon

RALGPS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: RALGPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1
translation: MYKRNDFMANVMVTSATPEGSSSSDSLEGRSSDYANKSYDAVVFDVLKVTPEEFASQITLMDMPVFKAIQPEELASCGWNKKEKHILAPNIVAFTRRFNQVSFWVVREILTAQTLKIRAEILSHFVKIAKKLLELNNLHSLMSVVSALQSAPIFRLTKTWALLNRKDKTTFEKLDYLLSKEDNYKRTREYIRSLKMVPTIPYLGIYLLDLIYIDSAYPASDSIMENEQRSNQMNNILRIIADLQVSCNYDHLTTLPHVQKYLKSVRYIEELQKFVEDDNYKLSLRIEPGNSSPRLVSSKEDLAGPSDMSAIVKFSRRPTCPDASVAASFPTPPVPRHRKSHSLGNNMMCQLSVVESKSATFPTERPRHLLDDSVLECHSPARGHAPSVRLANGLSRDSSESSEFSEELPSGLERGRLYATLGPNWKVPSRNSPRSRSCVYSPTGTCSCTAGGSTGVITMEGPLRRKTLLKEGKKPTLSSWTRYWVMLSGSTLLYFGAKSLRGTERKHYKSTPGKKVSIVGWMVALPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSNKPQVPANLMSFE
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(108660..108689,109038..109129,110125..110230,110406..110498,111576..111681,113807..113887,114176..114227,115434..115585,116462..116588,128360..128427,132365..132458,134124..134261,165751..165877,166880..166972,168424..168513,168988..169071,172013..172063,173914..174021,175612..175668))
location: region:108660-175668:-1
so has part: feature:175612-175668:-1:exon
so has part: feature:173914-174021:-1:exon
so has part: feature:172013-172063:-1:exon
so has part: feature:168988-169071:-1:exon
so has part: feature:168424-168513:-1:exon
so has part: feature:166880-166972:-1:exon
so has part: feature:165751-165877:-1:exon
so has part: feature:134124-134261:-1:exon
so has part: feature:132365-132458:-1:exon
so has part: feature:128360-128427:-1:exon
so has part: feature:116462-116588:-1:exon
so has part: feature:115434-115585:-1:exon
so has part: feature:114176-114227:-1:exon
so has part: feature:113807-113887:-1:exon
so has part: feature:111576-111681:-1:exon
so has part: feature:110406-110498:-1:exon
so has part: feature:110125-110230:-1:exon
so has part: feature:109038-109129:-1:exon
so has part: feature:108660-108689:-1:exon

XP_032563903.1
type: Protein
SIO_000068: ncbiprotein

position:108660:-1
position: 108660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175668:-1
position: 175668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175612-175668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:173914-174021:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:172013-172063:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:168988-169071:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:168424-168513:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:166880-166972:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:165751-165877:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:134124-134261:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:132365-132458:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:128360-128427:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:116462-116588:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:115434-115585:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:114176-114227:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:113807-113887:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:111576-111681:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:110406-110498:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:110125-110230:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:109038-109129:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:108660-108689:-1:exon

RALGPS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: RALGPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1
translation: MYKRNDFMANVMVTSATPEGSSSSDSLEGRSSDYANKSYDAVVFDVLKVTPEEFASQITLMDMPVFKAIQPEELASCGWNKKEKHILAPNIVAFTRRFNQVSFWVVREILTAQTLKIRAEILSHFVKIAKKLLELNNLHSLMSVVSALQSAPIFRLTKTWALLNRKDKTTFEKLDYLLSKEDNYKRTREYIRSLKMVPTIPYLGIYLLDLIYIDSAYPASDSIMENEQRSNQMNNILRIIADLQVSCNYDHLTTLPHVQKYLKSVRYIEELQKFVEDDNYKLSLRIEPGNSSPRLVSSKEDLAGPSDMSAIVKFSRRPTCPDASVAASFPTPPVPRHRKSHSLGNNMMCQLSVVESKSATFPTERPRHLLDDSVLECHSPARGHAPSVRLANGLSRDSSESSEFSEELPSGLERGRLYATLGPNWKVPSRNSPRSRSCVYSPTGTCSCTAGGSTGVITMEGPLRRKTLLKEGKKPTLSSWTRYWVMLSGSTLLYFGAKSLRGTERKHYKSTPGKKVSIVGWMVALPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSNKPQVPANLMSFE
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(108660..108689,109038..109129,110125..110230,110406..110498,111576..111681,113807..113887,114176..114227,115434..115585,116462..116588,128360..128427,132365..132458,134124..134261,165751..165877,166880..166972,168424..168513,168988..169071,172013..172063,173914..174021,175612..175668))
location: region:108660-175668:-1
so has part: feature:175612-175668:-1:exon
so has part: feature:173914-174021:-1:exon
so has part: feature:172013-172063:-1:exon
so has part: feature:168988-169071:-1:exon
so has part: feature:168424-168513:-1:exon
so has part: feature:166880-166972:-1:exon
so has part: feature:165751-165877:-1:exon
so has part: feature:134124-134261:-1:exon
so has part: feature:132365-132458:-1:exon
so has part: feature:128360-128427:-1:exon
so has part: feature:116462-116588:-1:exon
so has part: feature:115434-115585:-1:exon
so has part: feature:114176-114227:-1:exon
so has part: feature:113807-113887:-1:exon
so has part: feature:111576-111681:-1:exon
so has part: feature:110406-110498:-1:exon
so has part: feature:110125-110230:-1:exon
so has part: feature:109038-109129:-1:exon
so has part: feature:108660-108689:-1:exon

XP_032563904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:175612-175668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:173914-174021:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:172013-172063:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:168988-169071:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:168424-168513:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:166880-166972:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:165751-165877:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:134124-134261:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:132365-132458:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:128360-128427:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:116462-116588:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:115434-115585:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:114176-114227:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:113807-113887:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:111576-111681:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:110406-110498:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:110125-110230:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:109038-109129:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:108660-108689:-1:exon

RALGPS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: RALGPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X2
translation: MDMPVFKAIQPEELASCGWNKKEKHILAPNIVAFTRRFNQVSFWVVREILTAQTLKIRAEILSHFVKIAKKLLELNNLHSLMSVVSALQSAPIFRLTKTWALLNRKDKTTFEKLDYLLSKEDNYKRTREYIRSLKMVPTIPYLGIYLLDLIYIDSAYPASDSIMENEQRSNQMNNILRIIADLQVSCNYDHLTTLPHVQKYLKSVRYIEELQKFVEDDNYKLSLRIEPGNSSPRLVSSKEDLAGPSDMSAIVKFSRRPTCPDASVAASFPTPPVPRHRKSHSLGNNMMCQLSVVESKSATFPTERPRHLLDDSVLECHSPARGHAPSVRLANGLSRDSSESSEFSEELPSGLERGRLYATLGPNWKVPSRNSPRSRSCVYSPTGTCSCTAGGSTGVITMEGPLRRKTLLKEGKKPTLSSWTRYWVMLSGSTLLYFGAKSLRGTERKHYKSTPGKKVSIVGWMVALPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSNKPQVPANLMSFE
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(108660..108689,109038..109129,110125..110230,110406..110498,111576..111681,113807..113887,114176..114227,115434..115585,116462..116588,128360..128427,132365..132458,134124..134261,165751..165877,166880..166972,168424..168513,168988..169071,172013..172048))
location: region:108660-172048:-1
so has part: feature:172013-172048:-1:exon
so has part: feature:168988-169071:-1:exon
so has part: feature:168424-168513:-1:exon
so has part: feature:166880-166972:-1:exon
so has part: feature:165751-165877:-1:exon
so has part: feature:134124-134261:-1:exon
so has part: feature:132365-132458:-1:exon
so has part: feature:128360-128427:-1:exon
so has part: feature:116462-116588:-1:exon
so has part: feature:115434-115585:-1:exon
so has part: feature:114176-114227:-1:exon
so has part: feature:113807-113887:-1:exon
so has part: feature:111576-111681:-1:exon
so has part: feature:110406-110498:-1:exon
so has part: feature:110125-110230:-1:exon
so has part: feature:109038-109129:-1:exon
so has part: feature:108660-108689:-1:exon

XP_032563905.1
type: Protein
SIO_000068: ncbiprotein

position:172048:-1
position: 172048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172013-172048:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:168988-169071:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:168424-168513:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:166880-166972:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165751-165877:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:134124-134261:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:132365-132458:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:128360-128427:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:116462-116588:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:115434-115585:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:114176-114227:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:113807-113887:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:111576-111681:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:110406-110498:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:110125-110230:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:109038-109129:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:108660-108689:-1:exon

ANGPTL2
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: ANGPTL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 145196..161840
location: region:145196-161840:1
so has part: feature:145196-161840:1:exon
subclass of: SO_0000010

116796974
type: Gene
SIO_000068: ncbigene

position:145196:1
position: 145196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161840:1
position: 161840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145196-161840:1:exon

ANGPTL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ANGPTL2
product: angiopoietin like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 7 ESTs, 4 long SRA reads, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032708015.1
SIO_010081: ANGPTL2
subclass of: SO_0000673
so part of: ANGPTL2
location: join(145196..145423,154021..154874,159129..159322,159488..159758,160241..161840)
location: region:145196-161840:1
so has part: feature:145196-145423:1:exon
so has part: feature:154021-154874:1:exon
so has part: feature:159129-159322:1:exon
so has part: feature:159488-159758:1:exon
so has part: feature:160241-161840:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:145196-145423:1:exon

position:145423:1
position: 145423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:154021-154874:1:exon

position:154021:1
position: 154021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154874:1
position: 154874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:159129-159322:1:exon

position:159129:1
position: 159129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159322:1
position: 159322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:159488-159758:1:exon

position:159488:1
position: 159488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159758:1
position: 159758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:160241-161840:1:exon

position:160241:1
position: 160241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ANGPTL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ANGPTL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: angiopoietin-related protein 2
translation: MMTRFICLMLVTAVGVTTSKAQEFEGNDKETDQEFIYMNRYKRSSDTQDKCTYTFIVPQQRVTGAICVNSKEPEVLLENRVNKQELQLLNNELLKQKRQIETLQQLVEVDGGIVNEVKLLRKESRNMNSRVTQLYMQLLHEIIRKRDNALELSQLENKILNQTADMLQLASKYKDLEHKYQHLMSIANNQSMIIAQLEEHCQRMPSIKPLPQTPQPPHKVYQPPTYNRINNQISTNEIQSDQNLKVLPPTLPTMPAVTSIPTSTDKPSGPWRDCLQALEDGHDTSSIYLVKPENTNQLMQVWCDQRHDPGGWTVIQRRLDGSVNFFRNWETYKQGFGNIDGEYWLGLENIYWLTNQGNYKLLITMEDWSGRKVFAEYASFRLEPESEYYKLRLGRYNGNAGDSFTWHNGKQFTTLDRDHDVYTGNCAHYQKGGWWYNACAHSNLNGVWYRGGHYRSRYQDGVYWAEFRGGSYSLKKVVMMIRPNPNTFH
SIO_010081: ANGPTL2
subclass of: SO_0000673
so part of: ANGPTL2
location: join(154070..154874,159129..159322,159488..159758,160241..160440)
location: region:154070-160440:1
so has part: feature:154070-154874:1:exon
so has part: feature:159129-159322:1:exon
so has part: feature:159488-159758:1:exon
so has part: feature:160241-160440:1:exon

XP_032563906.1
type: Protein
SIO_000068: ncbiprotein

position:154070:1
position: 154070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160440:1
position: 160440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154070-154874:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:159129-159322:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:159488-159758:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:160241-160440:1:exon

ZBTB34
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: ZBTB34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(187004..201652)
location: region:187004-201652:-1
so has part: feature:187004-201652:-1:exon
subclass of: SO_0000010

116797180
type: Gene
SIO_000068: ncbigene

position:187004:-1
position: 187004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201652:-1
position: 201652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187004-201652:-1:exon

ZBTB34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ZBTB34
product: zinc finger and BTB domain containing 34, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032708504.1
SIO_010081: ZBTB34
subclass of: SO_0000673
so part of: ZBTB34
location: complement(join(187004..193215,194192..194306,201538..201652))
location: region:187004-201652:-1
so has part: feature:201538-201652:-1:exon
so has part: feature:194192-194306:-1:exon
so has part: feature:187004-193215:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:201538-201652:-1:exon

position:201538:-1
position: 201538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:194192-194306:-1:exon

position:194192:-1
position: 194192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194306:-1
position: 194306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:187004-193215:-1:exon

position:193215:-1
position: 193215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZBTB34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ZBTB34
product: zinc finger and BTB domain containing 34, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs, 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032708507.1
SIO_010081: ZBTB34
subclass of: SO_0000673
so part of: ZBTB34
location: complement(join(187004..193215,201538..201639))
location: region:187004-201639:-1
so has part: feature:201538-201639:-1:exon
so has part: feature:187004-193215:-1:exon

position:201639:-1
position: 201639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201538-201639:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:187004-193215:-1:exon

ZBTB34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ZBTB34
product: zinc finger and BTB domain containing 34, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032708505.1
SIO_010081: ZBTB34
subclass of: SO_0000673
so part of: ZBTB34
location: complement(join(187004..193215,194192..194819,201538..201629))
location: region:187004-201629:-1
so has part: feature:201538-201629:-1:exon
so has part: feature:194192-194819:-1:exon
so has part: feature:187004-193215:-1:exon

position:201629:-1
position: 201629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201538-201629:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194192-194819:-1:exon

position:194819:-1
position: 194819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:187004-193215:-1:exon

ZBTB34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ZBTB34
product: zinc finger and BTB domain containing 34, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032708506.1
SIO_010081: ZBTB34
subclass of: SO_0000673
so part of: ZBTB34
location: complement(join(187004..193215,194192..194306,200880..201120,201538..201569))
location: region:187004-201569:-1
so has part: feature:201538-201569:-1:exon
so has part: feature:200880-201120:-1:exon
so has part: feature:194192-194306:-1:exon
so has part: feature:187004-193215:-1:exon

position:201569:-1
position: 201569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201538-201569:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200880-201120:-1:exon

position:200880:-1
position: 200880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201120:-1
position: 201120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:194192-194306:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:187004-193215:-1:exon

ZBTB34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ZBTB34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 34 isoform X1
translation: MDDVEISLFNWKSRLLFTSVEMDSSSFIQFDVPEYSNTVLSQLNELRLQGKLCDIIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMSLQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKITVGDVDSVTVGAEENSENRNGVKDSSYFANPIEISPPYCSQVRQPTAGSDLRMETTPGKTLRSRLQEEGHSDRGSSGSISEYEIQIEGDHEQGDLIVRESQIAEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVGSYGSVLQHVYSFTHASSQATGVSETFGSLSNTSPSRSMLSCFRGGRARQKRVPTGHLHSDVQGLVQGADSESMVSNPGYENSPQERNARGHWYPYNERLICIYCGKSFNQKGSLDRHMRLHMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNHPGVTEVRNRVESPDRTEAFVEQKVDNDASASEAMDSSMEIHAMSNTSD
SIO_010081: ZBTB34
subclass of: SO_0000673
so part of: ZBTB34
location: complement(join(191694..193215,194192..194232))
location: region:191694-194232:-1
so has part: feature:194192-194232:-1:exon
so has part: feature:191694-193215:-1:exon

XP_032564395.1
type: Protein
SIO_000068: ncbiprotein

position:191694:-1
position: 191694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194232:-1
position: 194232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194192-194232:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:191694-193215:-1:exon

ZBTB34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ZBTB34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 34 isoform X1
translation: MDDVEISLFNWKSRLLFTSVEMDSSSFIQFDVPEYSNTVLSQLNELRLQGKLCDIIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMSLQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKITVGDVDSVTVGAEENSENRNGVKDSSYFANPIEISPPYCSQVRQPTAGSDLRMETTPGKTLRSRLQEEGHSDRGSSGSISEYEIQIEGDHEQGDLIVRESQIAEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVGSYGSVLQHVYSFTHASSQATGVSETFGSLSNTSPSRSMLSCFRGGRARQKRVPTGHLHSDVQGLVQGADSESMVSNPGYENSPQERNARGHWYPYNERLICIYCGKSFNQKGSLDRHMRLHMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNHPGVTEVRNRVESPDRTEAFVEQKVDNDASASEAMDSSMEIHAMSNTSD
SIO_010081: ZBTB34
subclass of: SO_0000673
so part of: ZBTB34
location: complement(join(191694..193215,194192..194232))
location: region:191694-194232:-1
so has part: feature:194192-194232:-1:exon
so has part: feature:191694-193215:-1:exon

XP_032564396.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194192-194232:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:191694-193215:-1:exon

ZBTB34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ZBTB34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 34 isoform X1
translation: MDDVEISLFNWKSRLLFTSVEMDSSSFIQFDVPEYSNTVLSQLNELRLQGKLCDIIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMSLQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKITVGDVDSVTVGAEENSENRNGVKDSSYFANPIEISPPYCSQVRQPTAGSDLRMETTPGKTLRSRLQEEGHSDRGSSGSISEYEIQIEGDHEQGDLIVRESQIAEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVGSYGSVLQHVYSFTHASSQATGVSETFGSLSNTSPSRSMLSCFRGGRARQKRVPTGHLHSDVQGLVQGADSESMVSNPGYENSPQERNARGHWYPYNERLICIYCGKSFNQKGSLDRHMRLHMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNHPGVTEVRNRVESPDRTEAFVEQKVDNDASASEAMDSSMEIHAMSNTSD
SIO_010081: ZBTB34
subclass of: SO_0000673
so part of: ZBTB34
location: complement(join(191694..193215,194192..194232))
location: region:191694-194232:-1
so has part: feature:194192-194232:-1:exon
so has part: feature:191694-193215:-1:exon

XP_032564397.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194192-194232:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:191694-193215:-1:exon

ZBTB34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ZBTB34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 34 isoform X2
translation: MDSSSFIQFDVPEYSNTVLSQLNELRLQGKLCDIIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMSLQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKITVGDVDSVTVGAEENSENRNGVKDSSYFANPIEISPPYCSQVRQPTAGSDLRMETTPGKTLRSRLQEEGHSDRGSSGSISEYEIQIEGDHEQGDLIVRESQIAEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVGSYGSVLQHVYSFTHASSQATGVSETFGSLSNTSPSRSMLSCFRGGRARQKRVPTGHLHSDVQGLVQGADSESMVSNPGYENSPQERNARGHWYPYNERLICIYCGKSFNQKGSLDRHMRLHMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNHPGVTEVRNRVESPDRTEAFVEQKVDNDASASEAMDSSMEIHAMSNTSD
SIO_010081: ZBTB34
subclass of: SO_0000673
so part of: ZBTB34
location: complement(191694..193193)
location: region:191694-193193:-1
so has part: feature:191694-193193:-1:exon

XP_032564398.1
type: Protein
SIO_000068: ncbiprotein

position:193193:-1
position: 193193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191694-193193:-1:exon

ZBTB43
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: ZBTB43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(203237..212106)
location: region:203237-212106:-1
so has part: feature:203237-212106:-1:exon
subclass of: SO_0000010

116797144
type: Gene
SIO_000068: ncbigene

position:203237:-1
position: 203237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212106:-1
position: 212106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203237-212106:-1:exon

ZBTB43
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ZBTB43
product: zinc finger and BTB domain containing 43, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 1 long SRA read, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032708435.1
SIO_010081: ZBTB43
subclass of: SO_0000673
so part of: ZBTB43
location: complement(join(203237..210008,211965..212106))
location: region:203237-212106:-1
so has part: feature:211965-212106:-1:exon
so has part: feature:203237-210008:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:211965-212106:-1:exon

position:211965:-1
position: 211965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:203237-210008:-1:exon

position:210008:-1
position: 210008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZBTB43
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ZBTB43
product: zinc finger and BTB domain containing 43, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 2 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032708431.1
SIO_010081: ZBTB43
subclass of: SO_0000673
so part of: ZBTB43
location: complement(join(203237..210008,211679..211770))
location: region:203237-211770:-1
so has part: feature:211679-211770:-1:exon
so has part: feature:203237-210008:-1:exon

position:211770:-1
position: 211770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211679-211770:-1:exon

position:211679:-1
position: 211679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:203237-210008:-1:exon

ZBTB43
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ZBTB43
product: zinc finger and BTB domain containing 43, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 1 long SRA read, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032708433.1
SIO_010081: ZBTB43
subclass of: SO_0000673
so part of: ZBTB43
location: complement(join(203237..210008,210101..210259,211679..211764))
location: region:203237-211764:-1
so has part: feature:211679-211764:-1:exon
so has part: feature:210101-210259:-1:exon
so has part: feature:203237-210008:-1:exon

position:211764:-1
position: 211764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211679-211764:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:210101-210259:-1:exon

position:210101:-1
position: 210101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210259:-1
position: 210259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:203237-210008:-1:exon

ZBTB43
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ZBTB43
product: zinc finger and BTB domain containing 43, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 1 long SRA read, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032708436.1
SIO_010081: ZBTB43
subclass of: SO_0000673
so part of: ZBTB43
location: complement(join(203237..210008,211683..211753))
location: region:203237-211753:-1
so has part: feature:211683-211753:-1:exon
so has part: feature:203237-210008:-1:exon

position:211753:-1
position: 211753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211683-211753:-1:exon

position:211683:-1
position: 211683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:203237-210008:-1:exon

ZBTB43
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ZBTB43
product: zinc finger and BTB domain containing 43, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 1 long SRA read, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032708434.1
SIO_010081: ZBTB43
subclass of: SO_0000673
so part of: ZBTB43
location: complement(join(203237..210008,210101..210259,211328..211445))
location: region:203237-211445:-1
so has part: feature:211328-211445:-1:exon
so has part: feature:210101-210259:-1:exon
so has part: feature:203237-210008:-1:exon

position:211445:-1
position: 211445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211328-211445:-1:exon

position:211328:-1
position: 211328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:210101-210259:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:203237-210008:-1:exon

ZBTB43
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ZBTB43
product: zinc finger and BTB domain containing 43, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 1 long SRA read, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_032708432.1
SIO_010081: ZBTB43
subclass of: SO_0000673
so part of: ZBTB43
location: complement(join(203237..210008,210101..210893))
location: region:203237-210893:-1
so has part: feature:210101-210893:-1:exon
so has part: feature:203237-210008:-1:exon

position:210893:-1
position: 210893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210101-210893:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:203237-210008:-1:exon

ZBTB43
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ZBTB43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 43 isoform X1
translation: MRETPQPVAQHLICNEMESGSSSFRVEFPDFSSTILQKLNQQRQQGQLCDVSIVVQGHLFRAHKAVLAASSPYFCDQVLLKNSRRIVLPDVMNPRVFENILLSTYTGRLVMPAPEIVSYLTAASFLQMWHVVDKCTEVLEGNPTVLCQKMNHGSDHQSPSSSNYNGLVETFELGSGGQTEFHKVQELRDGENEEEISKDELSCQLTEHEYLPSNSSTEHDRLSTGMTSQDGEEGTSDSAEYQYTRPMYSKPSIMSHKRWIHVKPERFEQDCEGVDNPYDEHQVSESMNAIQADHSIQSSGVEDFHIGDKKMETEFDEHADESNYDEQVDFYGSSMEEFSGERAEGNLSAHRQDLMIAAGYGEGIDMAAGIKEETSLTGFSHADKLYPCQCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICGKRFMWRDSFHRHVTSCTKSYQACKAEQSTTEMN
SIO_010081: ZBTB43
subclass of: SO_0000673
so part of: ZBTB43
location: complement(join(208591..210008,211679..211703))
location: region:208591-211703:-1
so has part: feature:211679-211703:-1:exon
so has part: feature:208591-210008:-1:exon

XP_032564322.1
type: Protein
SIO_000068: ncbiprotein

position:208591:-1
position: 208591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211703:-1
position: 211703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211679-211703:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:208591-210008:-1:exon

ZBTB43
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ZBTB43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 43 isoform X2
translation: MESGSSSFRVEFPDFSSTILQKLNQQRQQGQLCDVSIVVQGHLFRAHKAVLAASSPYFCDQVLLKNSRRIVLPDVMNPRVFENILLSTYTGRLVMPAPEIVSYLTAASFLQMWHVVDKCTEVLEGNPTVLCQKMNHGSDHQSPSSSNYNGLVETFELGSGGQTEFHKVQELRDGENEEEISKDELSCQLTEHEYLPSNSSTEHDRLSTGMTSQDGEEGTSDSAEYQYTRPMYSKPSIMSHKRWIHVKPERFEQDCEGVDNPYDEHQVSESMNAIQADHSIQSSGVEDFHIGDKKMETEFDEHADESNYDEQVDFYGSSMEEFSGERAEGNLSAHRQDLMIAAGYGEGIDMAAGIKEETSLTGFSHADKLYPCQCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICGKRFMWRDSFHRHVTSCTKSYQACKAEQSTTEMN
SIO_010081: ZBTB43
subclass of: SO_0000673
so part of: ZBTB43
location: complement(208591..209985)
location: region:208591-209985:-1
so has part: feature:208591-209985:-1:exon

XP_032564323.1
type: Protein
SIO_000068: ncbiprotein

position:209985:-1
position: 209985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208591-209985:-1:exon

ZBTB43
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ZBTB43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 43 isoform X2
translation: MESGSSSFRVEFPDFSSTILQKLNQQRQQGQLCDVSIVVQGHLFRAHKAVLAASSPYFCDQVLLKNSRRIVLPDVMNPRVFENILLSTYTGRLVMPAPEIVSYLTAASFLQMWHVVDKCTEVLEGNPTVLCQKMNHGSDHQSPSSSNYNGLVETFELGSGGQTEFHKVQELRDGENEEEISKDELSCQLTEHEYLPSNSSTEHDRLSTGMTSQDGEEGTSDSAEYQYTRPMYSKPSIMSHKRWIHVKPERFEQDCEGVDNPYDEHQVSESMNAIQADHSIQSSGVEDFHIGDKKMETEFDEHADESNYDEQVDFYGSSMEEFSGERAEGNLSAHRQDLMIAAGYGEGIDMAAGIKEETSLTGFSHADKLYPCQCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICGKRFMWRDSFHRHVTSCTKSYQACKAEQSTTEMN
SIO_010081: ZBTB43
subclass of: SO_0000673
so part of: ZBTB43
location: complement(208591..209985)
location: region:208591-209985:-1
so has part: feature:208591-209985:-1:exon

XP_032564324.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208591-209985:-1:exon

ZBTB43
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ZBTB43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 43 isoform X2
translation: MESGSSSFRVEFPDFSSTILQKLNQQRQQGQLCDVSIVVQGHLFRAHKAVLAASSPYFCDQVLLKNSRRIVLPDVMNPRVFENILLSTYTGRLVMPAPEIVSYLTAASFLQMWHVVDKCTEVLEGNPTVLCQKMNHGSDHQSPSSSNYNGLVETFELGSGGQTEFHKVQELRDGENEEEISKDELSCQLTEHEYLPSNSSTEHDRLSTGMTSQDGEEGTSDSAEYQYTRPMYSKPSIMSHKRWIHVKPERFEQDCEGVDNPYDEHQVSESMNAIQADHSIQSSGVEDFHIGDKKMETEFDEHADESNYDEQVDFYGSSMEEFSGERAEGNLSAHRQDLMIAAGYGEGIDMAAGIKEETSLTGFSHADKLYPCQCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICGKRFMWRDSFHRHVTSCTKSYQACKAEQSTTEMN
SIO_010081: ZBTB43
subclass of: SO_0000673
so part of: ZBTB43
location: complement(208591..209985)
location: region:208591-209985:-1
so has part: feature:208591-209985:-1:exon

XP_032564325.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208591-209985:-1:exon

ZBTB43
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ZBTB43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 43 isoform X2
translation: MESGSSSFRVEFPDFSSTILQKLNQQRQQGQLCDVSIVVQGHLFRAHKAVLAASSPYFCDQVLLKNSRRIVLPDVMNPRVFENILLSTYTGRLVMPAPEIVSYLTAASFLQMWHVVDKCTEVLEGNPTVLCQKMNHGSDHQSPSSSNYNGLVETFELGSGGQTEFHKVQELRDGENEEEISKDELSCQLTEHEYLPSNSSTEHDRLSTGMTSQDGEEGTSDSAEYQYTRPMYSKPSIMSHKRWIHVKPERFEQDCEGVDNPYDEHQVSESMNAIQADHSIQSSGVEDFHIGDKKMETEFDEHADESNYDEQVDFYGSSMEEFSGERAEGNLSAHRQDLMIAAGYGEGIDMAAGIKEETSLTGFSHADKLYPCQCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICGKRFMWRDSFHRHVTSCTKSYQACKAEQSTTEMN
SIO_010081: ZBTB43
subclass of: SO_0000673
so part of: ZBTB43
location: complement(208591..209985)
location: region:208591-209985:-1
so has part: feature:208591-209985:-1:exon

XP_032564326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208591-209985:-1:exon

ZBTB43
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ZBTB43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 43 isoform X2
translation: MESGSSSFRVEFPDFSSTILQKLNQQRQQGQLCDVSIVVQGHLFRAHKAVLAASSPYFCDQVLLKNSRRIVLPDVMNPRVFENILLSTYTGRLVMPAPEIVSYLTAASFLQMWHVVDKCTEVLEGNPTVLCQKMNHGSDHQSPSSSNYNGLVETFELGSGGQTEFHKVQELRDGENEEEISKDELSCQLTEHEYLPSNSSTEHDRLSTGMTSQDGEEGTSDSAEYQYTRPMYSKPSIMSHKRWIHVKPERFEQDCEGVDNPYDEHQVSESMNAIQADHSIQSSGVEDFHIGDKKMETEFDEHADESNYDEQVDFYGSSMEEFSGERAEGNLSAHRQDLMIAAGYGEGIDMAAGIKEETSLTGFSHADKLYPCQCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICGKRFMWRDSFHRHVTSCTKSYQACKAEQSTTEMN
SIO_010081: ZBTB43
subclass of: SO_0000673
so part of: ZBTB43
location: complement(208591..209985)
location: region:208591-209985:-1
so has part: feature:208591-209985:-1:exon

XP_032564327.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208591-209985:-1:exon

LMX1B
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LMX1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(297428..383567)
location: region:297428-383567:-1
so has part: feature:297428-383567:-1:exon
subclass of: SO_0000010

116797236
type: Gene
SIO_000068: ncbigene

position:297428:-1
position: 297428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383567:-1
position: 383567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297428-383567:-1:exon

LMX1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LMX1B
product: LIM homeobox transcription factor 1 beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032708595.1
SIO_010081: LMX1B
subclass of: SO_0000673
so part of: LMX1B
location: complement(join(297428..298073,299808..299969,300799..300865,301255..301332,301721..301899,304524..304756,382726..382912,383215..383567))
location: region:297428-383567:-1
so has part: feature:383215-383567:-1:exon
so has part: feature:382726-382912:-1:exon
so has part: feature:304524-304756:-1:exon
so has part: feature:301721-301899:-1:exon
so has part: feature:301255-301332:-1:exon
so has part: feature:300799-300865:-1:exon
so has part: feature:299808-299969:-1:exon
so has part: feature:297428-298073:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:383215-383567:-1:exon

position:383215:-1
position: 383215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:382726-382912:-1:exon

position:382726:-1
position: 382726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382912:-1
position: 382912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:304524-304756:-1:exon

position:304524:-1
position: 304524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304756:-1
position: 304756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:301721-301899:-1:exon

position:301721:-1
position: 301721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301899:-1
position: 301899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:301255-301332:-1:exon

position:301255:-1
position: 301255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301332:-1
position: 301332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:300799-300865:-1:exon

position:300799:-1
position: 300799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300865:-1
position: 300865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:299808-299969:-1:exon

position:299808:-1
position: 299808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299969:-1
position: 299969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:297428-298073:-1:exon

position:298073:-1
position: 298073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LMX1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LMX1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM homeobox transcription factor 1-beta
translation: MDIATGPESLERCFPRGPPDCAKMLDGIKMEDHPLRSGPATLGVLLGSECQHQAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDYQQLFAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDYEKEKDLLSSVSPDDSDSVKSDDEDGDVKPTKGQVTQGKGSDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQRLGQEVMSNRMEGMMTSYTPLAPPQQQIVAMEQSSYGTDPFQQGLTPPQMPGDHMNPYGNDSIFHDIDSDTSLTSLSDCFLASSEVNSMQARVGNPIDRLYSMQSSYFAS
SIO_010081: LMX1B
subclass of: SO_0000673
so part of: LMX1B
location: complement(join(297916..298073,299808..299969,300799..300865,301255..301332,301721..301899,304524..304756,382726..382912,383215..383353))
location: region:297916-383353:-1
so has part: feature:383215-383353:-1:exon
so has part: feature:382726-382912:-1:exon
so has part: feature:304524-304756:-1:exon
so has part: feature:301721-301899:-1:exon
so has part: feature:301255-301332:-1:exon
so has part: feature:300799-300865:-1:exon
so has part: feature:299808-299969:-1:exon
so has part: feature:297916-298073:-1:exon

XP_032564486.1
type: Protein
SIO_000068: ncbiprotein

position:297916:-1
position: 297916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383353:-1
position: 383353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383215-383353:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382726-382912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:304524-304756:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:301721-301899:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:301255-301332:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:300799-300865:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:299808-299969:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:297916-298073:-1:exon

LOC116797270
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116797270
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 383563..387525
location: region:383563-387525:1
so has part: feature:383563-387525:1:exon
subclass of: SO_0000010

116797270
type: Gene
SIO_000068: ncbigene

position:383563:1
position: 383563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387525:1
position: 387525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383563-387525:1:exon

LOC116797270
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116797270
product: collagen alpha-1(I) chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 60% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032708657.1
SIO_010081: LOC116797270
subclass of: SO_0000673
so part of: LOC116797270
location: join(383563..383729,383924..384487,385684..386097,386665..387353,387493..387525)
location: region:383563-387525:1
so has part: feature:383563-383729:1:exon
so has part: feature:383924-384487:1:exon
so has part: feature:385684-386097:1:exon
so has part: feature:386665-387353:1:exon
so has part: feature:387493-387525:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:383563-383729:1:exon

position:383729:1
position: 383729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:383924-384487:1:exon

position:383924:1
position: 383924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384487:1
position: 384487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:385684-386097:1:exon

position:385684:1
position: 385684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386097:1
position: 386097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:386665-387353:1:exon

position:386665:1
position: 386665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387353:1
position: 387353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:387493-387525:1:exon

position:387493:1
position: 387493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116797270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116797270
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(I) chain-like
translation: MGPPRYTGAHMPRTRRRAAAVSPARRQRRTHALRGAEGPPGAGRAGRSAGAVGRAGALAPPGPRGPRRAAAPGARGGRETRAVRARGAPPRAGEGENDLGRGWRRSGVTAAPLPGPSPAPLLTRRLLLAPALSGVGSSARPAPGHGQVAAGPSLGAPGPAATRVCPGGDGGATGPGGDAERGAGGCTSERRLRTVAAGLRAGELEQSSGLRAADAPSAATPRPLLWQRCPLGLAANAFERAGTRLTQPHLPAASFEFSVYLQGTSPCFGLILRVEQRTQPIPILPFPDEAGGRSIGLTNSGRTRGGAAAPNALHQISAGLRDEPPGPRSSPVGPAPVHTHAGSRRCGERSGTPAVCGTERRVTRGGRGRLGARAGWRRAFSAWTLHLAALRSPDLPRSPAERRSIGAGKNAHGRSTEGAPGHGAAGTADSCRGSAPPQRPAGAPLADSLPVARGAPHAPQNRALPRPALQPAAPTEPPAAAPAARCLPVARPLPPAAVVRGSPTTWPRWLGSPGGAVPAQEEPPPATHGGN
SIO_010081: LOC116797270
subclass of: SO_0000673
so part of: LOC116797270
location: join(383563..383729,383924..384487,385684..386097,386665..387115)
location: region:383563-387115:1
so has part: feature:383563-383729:1:exon
so has part: feature:383924-384487:1:exon
so has part: feature:385684-386097:1:exon
so has part: feature:386665-387115:1:exon

XP_032564548.1
type: Protein
SIO_000068: ncbiprotein

position:387115:1
position: 387115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383563-383729:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:383924-384487:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:385684-386097:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:386665-387115:1:exon

MVB12B
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: MVB12B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(433140..491758)
location: region:433140-491758:-1
so has part: feature:433140-491758:-1:exon
subclass of: SO_0000010

116797018
type: Gene
SIO_000068: ncbigene

position:433140:-1
position: 433140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491758:-1
position: 491758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433140-491758:-1:exon

MVB12B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: MVB12B
product: multivesicular body subunit 12B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 6 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032708101.1
SIO_010081: MVB12B
subclass of: SO_0000673
so part of: MVB12B
location: complement(join(433140..437782,442052..442111,443393..443448,461661..461758,473451..473573,473867..473996,476963..477059,480043..480150,485518..485640,486675..486792,491740..491758))
location: region:433140-491758:-1
so has part: feature:491740-491758:-1:exon
so has part: feature:486675-486792:-1:exon
so has part: feature:485518-485640:-1:exon
so has part: feature:480043-480150:-1:exon
so has part: feature:476963-477059:-1:exon
so has part: feature:473867-473996:-1:exon
so has part: feature:473451-473573:-1:exon
so has part: feature:461661-461758:-1:exon
so has part: feature:443393-443448:-1:exon
so has part: feature:442052-442111:-1:exon
so has part: feature:433140-437782:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:491740-491758:-1:exon

position:491740:-1
position: 491740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:486675-486792:-1:exon

position:486675:-1
position: 486675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486792:-1
position: 486792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:485518-485640:-1:exon

position:485518:-1
position: 485518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485640:-1
position: 485640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:480043-480150:-1:exon

position:480043:-1
position: 480043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480150:-1
position: 480150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:476963-477059:-1:exon

position:476963:-1
position: 476963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477059:-1
position: 477059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:473867-473996:-1:exon

position:473867:-1
position: 473867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473996:-1
position: 473996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:473451-473573:-1:exon

position:473451:-1
position: 473451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473573:-1
position: 473573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:461661-461758:-1:exon

position:461661:-1
position: 461661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461758:-1
position: 461758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:443393-443448:-1:exon

position:443393:-1
position: 443393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443448:-1
position: 443448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:442052-442111:-1:exon

position:442052:-1
position: 442052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:442111:-1
position: 442111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:433140-437782:-1:exon

position:437782:-1
position: 437782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MVB12B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: MVB12B
product: multivesicular body subunit 12B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 7 long SRA reads, 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032708098.1
SIO_010081: MVB12B
subclass of: SO_0000673
so part of: MVB12B
location: complement(join(433140..437782,442052..442111,443393..443448,461661..461758,473451..473573,473867..473996,476963..477059,480043..480150,485518..485640,486675..486760,491377..491652))
location: region:433140-491652:-1
so has part: feature:491377-491652:-1:exon
so has part: feature:486675-486760:-1:exon
so has part: feature:485518-485640:-1:exon
so has part: feature:480043-480150:-1:exon
so has part: feature:476963-477059:-1:exon
so has part: feature:473867-473996:-1:exon
so has part: feature:473451-473573:-1:exon
so has part: feature:461661-461758:-1:exon
so has part: feature:443393-443448:-1:exon
so has part: feature:442052-442111:-1:exon
so has part: feature:433140-437782:-1:exon

position:491652:-1
position: 491652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491377-491652:-1:exon

position:491377:-1
position: 491377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:486675-486760:-1:exon

position:486760:-1
position: 486760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:485518-485640:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:480043-480150:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:476963-477059:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:473867-473996:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:473451-473573:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:461661-461758:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:443393-443448:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:442052-442111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:433140-437782:-1:exon

MVB12B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: MVB12B
product: multivesicular body subunit 12B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 6 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032708097.1
SIO_010081: MVB12B
subclass of: SO_0000673
so part of: MVB12B
location: complement(join(433140..437782,442052..442111,443393..443448,461661..461758,473451..473573,473867..473996,476963..477059,480043..480150,485518..485640,491377..491466))
location: region:433140-491466:-1
so has part: feature:491377-491466:-1:exon
so has part: feature:485518-485640:-1:exon
so has part: feature:480043-480150:-1:exon
so has part: feature:476963-477059:-1:exon
so has part: feature:473867-473996:-1:exon
so has part: feature:473451-473573:-1:exon
so has part: feature:461661-461758:-1:exon
so has part: feature:443393-443448:-1:exon
so has part: feature:442052-442111:-1:exon
so has part: feature:433140-437782:-1:exon

position:491466:-1
position: 491466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491377-491466:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:485518-485640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:480043-480150:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:476963-477059:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:473867-473996:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:473451-473573:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:461661-461758:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:443393-443448:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:442052-442111:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:433140-437782:-1:exon

MVB12B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: MVB12B
product: multivesicular body subunit 12B, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 6 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032708102.1
SIO_010081: MVB12B
subclass of: SO_0000673
so part of: MVB12B
location: complement(join(433140..437782,442052..442111,443393..443448,461661..461758,473451..473573,473867..473996,476963..477059,480043..480150,485518..485640,486675..486792,491376..491452))
location: region:433140-491452:-1
so has part: feature:491376-491452:-1:exon
so has part: feature:486675-486792:-1:exon
so has part: feature:485518-485640:-1:exon
so has part: feature:480043-480150:-1:exon
so has part: feature:476963-477059:-1:exon
so has part: feature:473867-473996:-1:exon
so has part: feature:473451-473573:-1:exon
so has part: feature:461661-461758:-1:exon
so has part: feature:443393-443448:-1:exon
so has part: feature:442052-442111:-1:exon
so has part: feature:433140-437782:-1:exon

position:491452:-1
position: 491452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491376-491452:-1:exon

position:491376:-1
position: 491376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:486675-486792:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:485518-485640:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:480043-480150:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:476963-477059:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:473867-473996:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:473451-473573:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:461661-461758:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:443393-443448:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:442052-442111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:433140-437782:-1:exon

MVB12B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: MVB12B
product: multivesicular body subunit 12B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 6 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032708099.1
SIO_010081: MVB12B
subclass of: SO_0000673
so part of: MVB12B
location: complement(join(433140..437782,442052..442111,443393..443448,461661..461758,473451..473573,473867..473996,476963..477059,480043..480150,485518..485640,486336..486638))
location: region:433140-486638:-1
so has part: feature:486336-486638:-1:exon
so has part: feature:485518-485640:-1:exon
so has part: feature:480043-480150:-1:exon
so has part: feature:476963-477059:-1:exon
so has part: feature:473867-473996:-1:exon
so has part: feature:473451-473573:-1:exon
so has part: feature:461661-461758:-1:exon
so has part: feature:443393-443448:-1:exon
so has part: feature:442052-442111:-1:exon
so has part: feature:433140-437782:-1:exon

position:486638:-1
position: 486638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486336-486638:-1:exon

position:486336:-1
position: 486336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:485518-485640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:480043-480150:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:476963-477059:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:473867-473996:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:473451-473573:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:461661-461758:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:443393-443448:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:442052-442111:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:433140-437782:-1:exon

MVB12B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: MVB12B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: multivesicular body subunit 12B isoform X1
translation: MRSCFCLRRGSRDPPPAARATNQSIMPEVRDLSDALPELPMDPITGVGVVASRSRAPTGYDVVAQTADGLDADLWKDGLFKSKVTRYLCFTRSFSKENSHLGNVLVDMKLIDIKDTLPVGFIPIQETIDTQEIAFRKKRLCIKFIPRDSTEAAICDIRILGRSKQAPPQYTFIGELNSMGIWYRMGRVPRNHDPAQPAAPPAPAPASTPAPNLPRHISLTLPASFRGKSHSTRLDLEHQHSNLYAISAMDGVPFMISEKFACAPEGMQPVDLLGITIKTLAEIEKEYDYSFRTEQSAAARLPPSPTRCPPVPPS
SIO_010081: MVB12B
subclass of: SO_0000673
so part of: MVB12B
location: complement(join(437696..437782,442052..442111,443393..443448,461661..461758,473451..473573,473867..473996,476963..477059,480043..480150,485518..485640,491377..491439))
location: region:437696-491439:-1
so has part: feature:491377-491439:-1:exon
so has part: feature:485518-485640:-1:exon
so has part: feature:480043-480150:-1:exon
so has part: feature:476963-477059:-1:exon
so has part: feature:473867-473996:-1:exon
so has part: feature:473451-473573:-1:exon
so has part: feature:461661-461758:-1:exon
so has part: feature:443393-443448:-1:exon
so has part: feature:442052-442111:-1:exon
so has part: feature:437696-437782:-1:exon

XP_032563988.1
type: Protein
SIO_000068: ncbiprotein

position:437696:-1
position: 437696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491439:-1
position: 491439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491377-491439:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:485518-485640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:480043-480150:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:476963-477059:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:473867-473996:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:473451-473573:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:461661-461758:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:443393-443448:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:442052-442111:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:437696-437782:-1:exon

MVB12B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: MVB12B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: multivesicular body subunit 12B isoform X2
translation: MPEVRDLSDALPELPMDPITGVGVVASRSRAPTGYDVVAQTADGLDADLWKDGLFKSKVTRYLCFTRSFSKENSHLGNVLVDMKLIDIKDTLPVGFIPIQETIDTQEIAFRKKRLCIKFIPRDSTEAAICDIRILGRSKQAPPQYTFIGELNSMGIWYRMGRVPRNHDPAQPAAPPAPAPASTPAPNLPRHISLTLPASFRGKSHSTRLDLEHQHSNLYAISAMDGVPFMISEKFACAPEGMQPVDLLGITIKTLAEIEKEYDYSFRTEQSAAARLPPSPTRCPPVPPS
SIO_010081: MVB12B
subclass of: SO_0000673
so part of: MVB12B
location: complement(join(437696..437782,442052..442111,443393..443448,461661..461758,473451..473573,473867..473996,476963..477059,480043..480150,485518..485628))
location: region:437696-485628:-1
so has part: feature:485518-485628:-1:exon
so has part: feature:480043-480150:-1:exon
so has part: feature:476963-477059:-1:exon
so has part: feature:473867-473996:-1:exon
so has part: feature:473451-473573:-1:exon
so has part: feature:461661-461758:-1:exon
so has part: feature:443393-443448:-1:exon
so has part: feature:442052-442111:-1:exon
so has part: feature:437696-437782:-1:exon

XP_032563989.1
type: Protein
SIO_000068: ncbiprotein

position:485628:-1
position: 485628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485518-485628:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480043-480150:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:476963-477059:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:473867-473996:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:473451-473573:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:461661-461758:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:443393-443448:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:442052-442111:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:437696-437782:-1:exon

MVB12B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: MVB12B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: multivesicular body subunit 12B isoform X2
translation: MPEVRDLSDALPELPMDPITGVGVVASRSRAPTGYDVVAQTADGLDADLWKDGLFKSKVTRYLCFTRSFSKENSHLGNVLVDMKLIDIKDTLPVGFIPIQETIDTQEIAFRKKRLCIKFIPRDSTEAAICDIRILGRSKQAPPQYTFIGELNSMGIWYRMGRVPRNHDPAQPAAPPAPAPASTPAPNLPRHISLTLPASFRGKSHSTRLDLEHQHSNLYAISAMDGVPFMISEKFACAPEGMQPVDLLGITIKTLAEIEKEYDYSFRTEQSAAARLPPSPTRCPPVPPS
SIO_010081: MVB12B
subclass of: SO_0000673
so part of: MVB12B
location: complement(join(437696..437782,442052..442111,443393..443448,461661..461758,473451..473573,473867..473996,476963..477059,480043..480150,485518..485628))
location: region:437696-485628:-1
so has part: feature:485518-485628:-1:exon
so has part: feature:480043-480150:-1:exon
so has part: feature:476963-477059:-1:exon
so has part: feature:473867-473996:-1:exon
so has part: feature:473451-473573:-1:exon
so has part: feature:461661-461758:-1:exon
so has part: feature:443393-443448:-1:exon
so has part: feature:442052-442111:-1:exon
so has part: feature:437696-437782:-1:exon

XP_032563990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:485518-485628:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480043-480150:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:476963-477059:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:473867-473996:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:473451-473573:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:461661-461758:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:443393-443448:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:442052-442111:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:437696-437782:-1:exon

MVB12B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: MVB12B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: multivesicular body subunit 12B isoform X2
translation: MPEVRDLSDALPELPMDPITGVGVVASRSRAPTGYDVVAQTADGLDADLWKDGLFKSKVTRYLCFTRSFSKENSHLGNVLVDMKLIDIKDTLPVGFIPIQETIDTQEIAFRKKRLCIKFIPRDSTEAAICDIRILGRSKQAPPQYTFIGELNSMGIWYRMGRVPRNHDPAQPAAPPAPAPASTPAPNLPRHISLTLPASFRGKSHSTRLDLEHQHSNLYAISAMDGVPFMISEKFACAPEGMQPVDLLGITIKTLAEIEKEYDYSFRTEQSAAARLPPSPTRCPPVPPS
SIO_010081: MVB12B
subclass of: SO_0000673
so part of: MVB12B
location: complement(join(437696..437782,442052..442111,443393..443448,461661..461758,473451..473573,473867..473996,476963..477059,480043..480150,485518..485628))
location: region:437696-485628:-1
so has part: feature:485518-485628:-1:exon
so has part: feature:480043-480150:-1:exon
so has part: feature:476963-477059:-1:exon
so has part: feature:473867-473996:-1:exon
so has part: feature:473451-473573:-1:exon
so has part: feature:461661-461758:-1:exon
so has part: feature:443393-443448:-1:exon
so has part: feature:442052-442111:-1:exon
so has part: feature:437696-437782:-1:exon

XP_032563992.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:485518-485628:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480043-480150:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:476963-477059:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:473867-473996:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:473451-473573:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:461661-461758:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:443393-443448:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:442052-442111:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:437696-437782:-1:exon

MVB12B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: MVB12B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: multivesicular body subunit 12B isoform X2
translation: MPEVRDLSDALPELPMDPITGVGVVASRSRAPTGYDVVAQTADGLDADLWKDGLFKSKVTRYLCFTRSFSKENSHLGNVLVDMKLIDIKDTLPVGFIPIQETIDTQEIAFRKKRLCIKFIPRDSTEAAICDIRILGRSKQAPPQYTFIGELNSMGIWYRMGRVPRNHDPAQPAAPPAPAPASTPAPNLPRHISLTLPASFRGKSHSTRLDLEHQHSNLYAISAMDGVPFMISEKFACAPEGMQPVDLLGITIKTLAEIEKEYDYSFRTEQSAAARLPPSPTRCPPVPPS
SIO_010081: MVB12B
subclass of: SO_0000673
so part of: MVB12B
location: complement(join(437696..437782,442052..442111,443393..443448,461661..461758,473451..473573,473867..473996,476963..477059,480043..480150,485518..485628))
location: region:437696-485628:-1
so has part: feature:485518-485628:-1:exon
so has part: feature:480043-480150:-1:exon
so has part: feature:476963-477059:-1:exon
so has part: feature:473867-473996:-1:exon
so has part: feature:473451-473573:-1:exon
so has part: feature:461661-461758:-1:exon
so has part: feature:443393-443448:-1:exon
so has part: feature:442052-442111:-1:exon
so has part: feature:437696-437782:-1:exon

XP_032563993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:485518-485628:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480043-480150:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:476963-477059:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:473867-473996:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:473451-473573:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:461661-461758:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:443393-443448:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:442052-442111:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:437696-437782:-1:exon

MVB12B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: MVB12B
product: multivesicular body subunit 12B, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032708103.1
SIO_010081: MVB12B
subclass of: SO_0000673
so part of: MVB12B
location: complement(join(473447..473573,473867..473996,476963..477059,480043..480150,485518..485640,491347..491466))
location: region:473447-491466:-1
so has part: feature:491347-491466:-1:exon
so has part: feature:485518-485640:-1:exon
so has part: feature:480043-480150:-1:exon
so has part: feature:476963-477059:-1:exon
so has part: feature:473867-473996:-1:exon
so has part: feature:473447-473573:-1:exon

position:473447:-1
position: 473447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491347-491466:-1:exon

position:491347:-1
position: 491347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:485518-485640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:480043-480150:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:476963-477059:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:473867-473996:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:473447-473573:-1:exon

MVB12B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: MVB12B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: multivesicular body subunit 12B isoform X3
translation: MRSCFCLRRGSRDPPPAARATVKCPRARRGPNQSIMPEVRDLSDALPELPMDPITGVGVVASRSRAPTGYDVVAQTADGLDADLWKDGLFKSKVTRYLCFTRSFSKENSHLGNVLVDMKLIDIKDTLPVGFIPIQETIDTQEIAFRKKRLCIKFIPRDSTEAAICDIRILGRSKQAPPQYTFIGELNSMGIWYRMGRVPRNHDPAQPAAPPAPAPASTPAPNLPR
SIO_010081: MVB12B
subclass of: SO_0000673
so part of: MVB12B
location: complement(join(473447..473573,473867..473996,476963..477059,480043..480150,485518..485640,491347..491439))
location: region:473447-491439:-1
so has part: feature:491347-491439:-1:exon
so has part: feature:485518-485640:-1:exon
so has part: feature:480043-480150:-1:exon
so has part: feature:476963-477059:-1:exon
so has part: feature:473867-473996:-1:exon
so has part: feature:473447-473573:-1:exon

XP_032563994.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:491347-491439:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:485518-485640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:480043-480150:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:476963-477059:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:473867-473996:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:473447-473573:-1:exon

LOC116797193
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116797193
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(527411..533135)
location: region:527411-533135:-1
so has part: feature:527411-533135:-1:exon
subclass of: SO_0000011

116797193
type: Gene
SIO_000068: ncbigene

position:527411:-1
position: 527411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533135:-1
position: 533135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527411-533135:-1:exon

LOC116797193
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116797193
product: uncharacterized LOC116797193
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004360588.1
SIO_010081: LOC116797193
subclass of: SO_0000673
so part of: LOC116797193
location: complement(join(527411..527737,533007..533135))
location: region:527411-533135:-1
so has part: feature:533007-533135:-1:exon
so has part: feature:527411-527737:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:533007-533135:-1:exon

position:533007:-1
position: 533007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:527411-527737:-1:exon

position:527737:-1
position: 527737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116797263
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116797263
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 587953..592151
location: region:587953-592151:1
so has part: feature:587953-592151:1:exon
subclass of: SO_0000011

116797263
type: Gene
SIO_000068: ncbigene

position:587953:1
position: 587953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592151:1
position: 592151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587953-592151:1:exon

LOC116797263
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116797263
product: uncharacterized LOC116797263
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004360602.1
SIO_010081: LOC116797263
subclass of: SO_0000673
so part of: LOC116797263
location: join(587953..588927,591763..591844,591956..592151)
location: region:587953-592151:1
so has part: feature:587953-588927:1:exon
so has part: feature:591763-591844:1:exon
so has part: feature:591956-592151:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:587953-588927:1:exon

position:588927:1
position: 588927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:591763-591844:1:exon

position:591763:1
position: 591763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591844:1
position: 591844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:591956-592151:1:exon

position:591956:1
position: 591956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PBX3
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: PBX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(648211..752713)
location: region:648211-752713:-1
so has part: feature:648211-752713:-1:exon
subclass of: SO_0000010

116797039
type: Gene
SIO_000068: ncbigene

position:648211:-1
position: 648211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:752713:-1
position: 752713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:648211-752713:-1:exon

PBX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PBX3
product: PBX homeobox 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 19 ESTs, 16 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032708175.1
SIO_010081: PBX3
subclass of: SO_0000673
so part of: PBX3
location: complement(join(648211..649768,652576..652665,653502..653614,654867..655032,661325..661460,663242..663432,667470..667711,750686..750759,751597..752187,752653..752713))
location: region:648211-752713:-1
so has part: feature:752653-752713:-1:exon
so has part: feature:751597-752187:-1:exon
so has part: feature:750686-750759:-1:exon
so has part: feature:667470-667711:-1:exon
so has part: feature:663242-663432:-1:exon
so has part: feature:661325-661460:-1:exon
so has part: feature:654867-655032:-1:exon
so has part: feature:653502-653614:-1:exon
so has part: feature:652576-652665:-1:exon
so has part: feature:648211-649768:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:752653-752713:-1:exon

position:752653:-1
position: 752653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:751597-752187:-1:exon

position:751597:-1
position: 751597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:752187:-1
position: 752187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:750686-750759:-1:exon

position:750686:-1
position: 750686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:750759:-1
position: 750759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:667470-667711:-1:exon

position:667470:-1
position: 667470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667711:-1
position: 667711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:663242-663432:-1:exon

position:663242:-1
position: 663242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663432:-1
position: 663432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:661325-661460:-1:exon

position:661325:-1
position: 661325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661460:-1
position: 661460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:654867-655032:-1:exon

position:654867:-1
position: 654867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:655032:-1
position: 655032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:653502-653614:-1:exon

position:653502:-1
position: 653502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:653614:-1
position: 653614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:652576-652665:-1:exon

position:652576:-1
position: 652576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:652665:-1
position: 652665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:648211-649768:-1:exon

position:649768:-1
position: 649768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PBX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PBX3
product: PBX homeobox 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 19 ESTs, 16 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032708173.1
SIO_010081: PBX3
subclass of: SO_0000673
so part of: PBX3
location: complement(join(648211..649768,652576..652665,653502..653614,654867..655032,661325..661460,663242..663432,667470..667711,750686..750759,751597..752187,752518..752707))
location: region:648211-752707:-1
so has part: feature:752518-752707:-1:exon
so has part: feature:751597-752187:-1:exon
so has part: feature:750686-750759:-1:exon
so has part: feature:667470-667711:-1:exon
so has part: feature:663242-663432:-1:exon
so has part: feature:661325-661460:-1:exon
so has part: feature:654867-655032:-1:exon
so has part: feature:653502-653614:-1:exon
so has part: feature:652576-652665:-1:exon
so has part: feature:648211-649768:-1:exon

position:752707:-1
position: 752707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:752518-752707:-1:exon

position:752518:-1
position: 752518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:751597-752187:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:750686-750759:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:667470-667711:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:663242-663432:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:661325-661460:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:654867-655032:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:653502-653614:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:652576-652665:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:648211-649768:-1:exon

PBX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PBX3
product: PBX homeobox 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 19 ESTs, 16 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032708171.1
SIO_010081: PBX3
subclass of: SO_0000673
so part of: PBX3
location: complement(join(648211..649768,652576..652665,653502..653614,654867..655032,661325..661460,663242..663432,667470..667711,750686..750759,751597..752190,752518..752707))
location: region:648211-752707:-1
so has part: feature:752518-752707:-1:exon
so has part: feature:751597-752190:-1:exon
so has part: feature:750686-750759:-1:exon
so has part: feature:667470-667711:-1:exon
so has part: feature:663242-663432:-1:exon
so has part: feature:661325-661460:-1:exon
so has part: feature:654867-655032:-1:exon
so has part: feature:653502-653614:-1:exon
so has part: feature:652576-652665:-1:exon
so has part: feature:648211-649768:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:752518-752707:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:751597-752190:-1:exon

position:752190:-1
position: 752190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:750686-750759:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:667470-667711:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:663242-663432:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:661325-661460:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:654867-655032:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:653502-653614:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:652576-652665:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:648211-649768:-1:exon

PBX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PBX3
product: PBX homeobox 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 19 ESTs, 16 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032708174.1
SIO_010081: PBX3
subclass of: SO_0000673
so part of: PBX3
location: complement(join(648211..649768,652576..652665,653502..653614,654867..655032,661325..661460,663242..663432,667470..667711,750686..750759,751597..752187,752514..752707))
location: region:648211-752707:-1
so has part: feature:752514-752707:-1:exon
so has part: feature:751597-752187:-1:exon
so has part: feature:750686-750759:-1:exon
so has part: feature:667470-667711:-1:exon
so has part: feature:663242-663432:-1:exon
so has part: feature:661325-661460:-1:exon
so has part: feature:654867-655032:-1:exon
so has part: feature:653502-653614:-1:exon
so has part: feature:652576-652665:-1:exon
so has part: feature:648211-649768:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:752514-752707:-1:exon

position:752514:-1
position: 752514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:751597-752187:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:750686-750759:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:667470-667711:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:663242-663432:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:661325-661460:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:654867-655032:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:653502-653614:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:652576-652665:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:648211-649768:-1:exon

PBX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PBX3
product: PBX homeobox 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 26 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032708170.1
SIO_010081: PBX3
subclass of: SO_0000673
so part of: PBX3
location: complement(join(648211..649768,652576..652665,653502..653614,654867..655032,661325..661460,663242..663432,667470..667711,750686..750759,751597..752707))
location: region:648211-752707:-1
so has part: feature:751597-752707:-1:exon
so has part: feature:750686-750759:-1:exon
so has part: feature:667470-667711:-1:exon
so has part: feature:663242-663432:-1:exon
so has part: feature:661325-661460:-1:exon
so has part: feature:654867-655032:-1:exon
so has part: feature:653502-653614:-1:exon
so has part: feature:652576-652665:-1:exon
so has part: feature:648211-649768:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:751597-752707:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:750686-750759:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:667470-667711:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:663242-663432:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:661325-661460:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:654867-655032:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:653502-653614:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:652576-652665:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:648211-649768:-1:exon

PBX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PBX3
product: PBX homeobox 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 19 ESTs, 16 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032708176.1
SIO_010081: PBX3
subclass of: SO_0000673
so part of: PBX3
location: complement(join(648211..649768,652576..652665,653502..653614,654867..655032,661325..661460,663242..663432,667470..667711,750686..750759,751597..752190,752653..752698))
location: region:648211-752698:-1
so has part: feature:752653-752698:-1:exon
so has part: feature:751597-752190:-1:exon
so has part: feature:750686-750759:-1:exon
so has part: feature:667470-667711:-1:exon
so has part: feature:663242-663432:-1:exon
so has part: feature:661325-661460:-1:exon
so has part: feature:654867-655032:-1:exon
so has part: feature:653502-653614:-1:exon
so has part: feature:652576-652665:-1:exon
so has part: feature:648211-649768:-1:exon

position:752698:-1
position: 752698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:752653-752698:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:751597-752190:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:750686-750759:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:667470-667711:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:663242-663432:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:661325-661460:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:654867-655032:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:653502-653614:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:652576-652665:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:648211-649768:-1:exon

PBX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PBX3
product: PBX homeobox 3, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 9 ESTs, 1 long SRA read, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032708177.1
SIO_010081: PBX3
subclass of: SO_0000673
so part of: PBX3
location: complement(join(649176..649768,652576..652665,654867..655032,661325..661460,663242..663432,667470..667711,750686..750759,751597..752707))
location: region:649176-752707:-1
so has part: feature:751597-752707:-1:exon
so has part: feature:750686-750759:-1:exon
so has part: feature:667470-667711:-1:exon
so has part: feature:663242-663432:-1:exon
so has part: feature:661325-661460:-1:exon
so has part: feature:654867-655032:-1:exon
so has part: feature:652576-652665:-1:exon
so has part: feature:649176-649768:-1:exon

position:649176:-1
position: 649176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751597-752707:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:750686-750759:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:667470-667711:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:663242-663432:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:661325-661460:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:654867-655032:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:652576-652665:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:649176-649768:-1:exon

PBX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PBX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-B-cell leukemia transcription factor 3 isoform X1
translation: MDDQSRMLQTLAGVNLAGHSVQGGMALPPPHGHEGADGDGRKQDIGDILHQIMTITDQSLDEAQAKKHALNCHRMKPALFSVLCEIKEKTGLSIRGAQEEDPPDPQLMRLDNMLLAEGVSGPEKGGGSAAAAAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAAKTAVTAAHAVAAAVQNNQTNSPTTPNSGSSGSFNLPNSGDMFMNMQSLNGDSYQGSQVGANVQSQVDTLRHVINQTGGYNDGLGGNSLYSPHNLNANGGWQDATTPSSVTSPTEGPGSVHSDTSN
SIO_010081: PBX3
subclass of: SO_0000673
so part of: PBX3
location: complement(join(649676..649768,652576..652665,653502..653614,654867..655032,661325..661460,663242..663432,667470..667711,750686..750759,751597..751793))
location: region:649676-751793:-1
so has part: feature:751597-751793:-1:exon
so has part: feature:750686-750759:-1:exon
so has part: feature:667470-667711:-1:exon
so has part: feature:663242-663432:-1:exon
so has part: feature:661325-661460:-1:exon
so has part: feature:654867-655032:-1:exon
so has part: feature:653502-653614:-1:exon
so has part: feature:652576-652665:-1:exon
so has part: feature:649676-649768:-1:exon

XP_032564061.1
type: Protein
SIO_000068: ncbiprotein

position:649676:-1
position: 649676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:751793:-1
position: 751793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751597-751793:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:750686-750759:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:667470-667711:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:663242-663432:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:661325-661460:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:654867-655032:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:653502-653614:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:652576-652665:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:649676-649768:-1:exon

PBX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PBX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-B-cell leukemia transcription factor 3 isoform X1
translation: MDDQSRMLQTLAGVNLAGHSVQGGMALPPPHGHEGADGDGRKQDIGDILHQIMTITDQSLDEAQAKKHALNCHRMKPALFSVLCEIKEKTGLSIRGAQEEDPPDPQLMRLDNMLLAEGVSGPEKGGGSAAAAAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAAKTAVTAAHAVAAAVQNNQTNSPTTPNSGSSGSFNLPNSGDMFMNMQSLNGDSYQGSQVGANVQSQVDTLRHVINQTGGYNDGLGGNSLYSPHNLNANGGWQDATTPSSVTSPTEGPGSVHSDTSN
SIO_010081: PBX3
subclass of: SO_0000673
so part of: PBX3
location: complement(join(649676..649768,652576..652665,653502..653614,654867..655032,661325..661460,663242..663432,667470..667711,750686..750759,751597..751793))
location: region:649676-751793:-1
so has part: feature:751597-751793:-1:exon
so has part: feature:750686-750759:-1:exon
so has part: feature:667470-667711:-1:exon
so has part: feature:663242-663432:-1:exon
so has part: feature:661325-661460:-1:exon
so has part: feature:654867-655032:-1:exon
so has part: feature:653502-653614:-1:exon
so has part: feature:652576-652665:-1:exon
so has part: feature:649676-649768:-1:exon

XP_032564062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:751597-751793:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:750686-750759:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:667470-667711:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:663242-663432:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:661325-661460:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:654867-655032:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:653502-653614:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:652576-652665:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:649676-649768:-1:exon

PBX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PBX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-B-cell leukemia transcription factor 3 isoform X1
translation: MDDQSRMLQTLAGVNLAGHSVQGGMALPPPHGHEGADGDGRKQDIGDILHQIMTITDQSLDEAQAKKHALNCHRMKPALFSVLCEIKEKTGLSIRGAQEEDPPDPQLMRLDNMLLAEGVSGPEKGGGSAAAAAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAAKTAVTAAHAVAAAVQNNQTNSPTTPNSGSSGSFNLPNSGDMFMNMQSLNGDSYQGSQVGANVQSQVDTLRHVINQTGGYNDGLGGNSLYSPHNLNANGGWQDATTPSSVTSPTEGPGSVHSDTSN
SIO_010081: PBX3
subclass of: SO_0000673
so part of: PBX3
location: complement(join(649676..649768,652576..652665,653502..653614,654867..655032,661325..661460,663242..663432,667470..667711,750686..750759,751597..751793))
location: region:649676-751793:-1
so has part: feature:751597-751793:-1:exon
so has part: feature:750686-750759:-1:exon
so has part: feature:667470-667711:-1:exon
so has part: feature:663242-663432:-1:exon
so has part: feature:661325-661460:-1:exon
so has part: feature:654867-655032:-1:exon
so has part: feature:653502-653614:-1:exon
so has part: feature:652576-652665:-1:exon
so has part: feature:649676-649768:-1:exon

XP_032564064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:751597-751793:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:750686-750759:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:667470-667711:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:663242-663432:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:661325-661460:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:654867-655032:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:653502-653614:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:652576-652665:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:649676-649768:-1:exon

PBX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PBX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-B-cell leukemia transcription factor 3 isoform X1
translation: MDDQSRMLQTLAGVNLAGHSVQGGMALPPPHGHEGADGDGRKQDIGDILHQIMTITDQSLDEAQAKKHALNCHRMKPALFSVLCEIKEKTGLSIRGAQEEDPPDPQLMRLDNMLLAEGVSGPEKGGGSAAAAAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAAKTAVTAAHAVAAAVQNNQTNSPTTPNSGSSGSFNLPNSGDMFMNMQSLNGDSYQGSQVGANVQSQVDTLRHVINQTGGYNDGLGGNSLYSPHNLNANGGWQDATTPSSVTSPTEGPGSVHSDTSN
SIO_010081: PBX3
subclass of: SO_0000673
so part of: PBX3
location: complement(join(649676..649768,652576..652665,653502..653614,654867..655032,661325..661460,663242..663432,667470..667711,750686..750759,751597..751793))
location: region:649676-751793:-1
so has part: feature:751597-751793:-1:exon
so has part: feature:750686-750759:-1:exon
so has part: feature:667470-667711:-1:exon
so has part: feature:663242-663432:-1:exon
so has part: feature:661325-661460:-1:exon
so has part: feature:654867-655032:-1:exon
so has part: feature:653502-653614:-1:exon
so has part: feature:652576-652665:-1:exon
so has part: feature:649676-649768:-1:exon

XP_032564065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:751597-751793:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:750686-750759:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:667470-667711:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:663242-663432:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:661325-661460:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:654867-655032:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:653502-653614:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:652576-652665:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:649676-649768:-1:exon

PBX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PBX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-B-cell leukemia transcription factor 3 isoform X1
translation: MDDQSRMLQTLAGVNLAGHSVQGGMALPPPHGHEGADGDGRKQDIGDILHQIMTITDQSLDEAQAKKHALNCHRMKPALFSVLCEIKEKTGLSIRGAQEEDPPDPQLMRLDNMLLAEGVSGPEKGGGSAAAAAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAAKTAVTAAHAVAAAVQNNQTNSPTTPNSGSSGSFNLPNSGDMFMNMQSLNGDSYQGSQVGANVQSQVDTLRHVINQTGGYNDGLGGNSLYSPHNLNANGGWQDATTPSSVTSPTEGPGSVHSDTSN
SIO_010081: PBX3
subclass of: SO_0000673
so part of: PBX3
location: complement(join(649676..649768,652576..652665,653502..653614,654867..655032,661325..661460,663242..663432,667470..667711,750686..750759,751597..751793))
location: region:649676-751793:-1
so has part: feature:751597-751793:-1:exon
so has part: feature:750686-750759:-1:exon
so has part: feature:667470-667711:-1:exon
so has part: feature:663242-663432:-1:exon
so has part: feature:661325-661460:-1:exon
so has part: feature:654867-655032:-1:exon
so has part: feature:653502-653614:-1:exon
so has part: feature:652576-652665:-1:exon
so has part: feature:649676-649768:-1:exon

XP_032564066.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:751597-751793:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:750686-750759:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:667470-667711:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:663242-663432:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:661325-661460:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:654867-655032:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:653502-653614:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:652576-652665:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:649676-649768:-1:exon

PBX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PBX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-B-cell leukemia transcription factor 3 isoform X1
translation: MDDQSRMLQTLAGVNLAGHSVQGGMALPPPHGHEGADGDGRKQDIGDILHQIMTITDQSLDEAQAKKHALNCHRMKPALFSVLCEIKEKTGLSIRGAQEEDPPDPQLMRLDNMLLAEGVSGPEKGGGSAAAAAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAAKTAVTAAHAVAAAVQNNQTNSPTTPNSGSSGSFNLPNSGDMFMNMQSLNGDSYQGSQVGANVQSQVDTLRHVINQTGGYNDGLGGNSLYSPHNLNANGGWQDATTPSSVTSPTEGPGSVHSDTSN
SIO_010081: PBX3
subclass of: SO_0000673
so part of: PBX3
location: complement(join(649676..649768,652576..652665,653502..653614,654867..655032,661325..661460,663242..663432,667470..667711,750686..750759,751597..751793))
location: region:649676-751793:-1
so has part: feature:751597-751793:-1:exon
so has part: feature:750686-750759:-1:exon
so has part: feature:667470-667711:-1:exon
so has part: feature:663242-663432:-1:exon
so has part: feature:661325-661460:-1:exon
so has part: feature:654867-655032:-1:exon
so has part: feature:653502-653614:-1:exon
so has part: feature:652576-652665:-1:exon
so has part: feature:649676-649768:-1:exon

XP_032564067.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:751597-751793:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:750686-750759:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:667470-667711:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:663242-663432:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:661325-661460:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:654867-655032:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:653502-653614:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:652576-652665:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:649676-649768:-1:exon

PBX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PBX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-B-cell leukemia transcription factor 3 isoform X2
translation: MDDQSRMLQTLAGVNLAGHSVQGGMALPPPHGHEGADGDGRKQDIGDILHQIMTITDQSLDEAQAKKHALNCHRMKPALFSVLCEIKEKTGLSIRGAQEEDPPDPQLMRLDNMLLAEGVSGPEKGGGSAAAAAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAAKTAVTAAHAVAAAVQNNQTNSPTTPNSGGYPASCYQSDGRIQ
SIO_010081: PBX3
subclass of: SO_0000673
so part of: PBX3
location: complement(join(652619..652665,654867..655032,661325..661460,663242..663432,667470..667711,750686..750759,751597..751793))
location: region:652619-751793:-1
so has part: feature:751597-751793:-1:exon
so has part: feature:750686-750759:-1:exon
so has part: feature:667470-667711:-1:exon
so has part: feature:663242-663432:-1:exon
so has part: feature:661325-661460:-1:exon
so has part: feature:654867-655032:-1:exon
so has part: feature:652619-652665:-1:exon

XP_032564068.1
type: Protein
SIO_000068: ncbiprotein

position:652619:-1
position: 652619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751597-751793:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:750686-750759:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:667470-667711:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:663242-663432:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:661325-661460:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:654867-655032:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:652619-652665:-1:exon

LOC116797213
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116797213
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 753142..753567
location: region:753142-753567:1
so has part: feature:753142-753567:1:exon
subclass of: SO_0000011

116797213
type: Gene
SIO_000068: ncbigene

position:753142:1
position: 753142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753567:1
position: 753567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:753142-753567:1:exon

LOC116797213
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116797213
product: uncharacterized LOC116797213
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004360592.1
SIO_010081: LOC116797213
subclass of: SO_0000673
so part of: LOC116797213
location: join(753142..753329,753467..753567)
location: region:753142-753567:1
so has part: feature:753142-753329:1:exon
so has part: feature:753467-753567:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:753142-753329:1:exon

position:753329:1
position: 753329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:753467-753567:1:exon

position:753467:1
position: 753467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAPKAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: MAPKAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 755096..844566
location: region:755096-844566:1
so has part: feature:755096-844566:1:exon
subclass of: SO_0000010

116797133
type: Gene
SIO_000068: ncbigene

position:755096:1
position: 755096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:844566:1
position: 844566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:755096-844566:1:exon

MAPKAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: MAPKAP1
product: MAPK associated protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 2 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032708401.1
SIO_010081: MAPKAP1
subclass of: SO_0000673
so part of: MAPKAP1
location: join(755096..755143,765343..765667,768774..768863,773240..773388,792641..792813,796813..796989,804797..804906,819344..819451,825786..825926,830677..830814,841001..841098,842907..844566)
location: region:755096-844566:1
so has part: feature:755096-755143:1:exon
so has part: feature:765343-765667:1:exon
so has part: feature:768774-768863:1:exon
so has part: feature:773240-773388:1:exon
so has part: feature:792641-792813:1:exon
so has part: feature:796813-796989:1:exon
so has part: feature:804797-804906:1:exon
so has part: feature:819344-819451:1:exon
so has part: feature:825786-825926:1:exon
so has part: feature:830677-830814:1:exon
so has part: feature:841001-841098:1:exon
so has part: feature:842907-844566:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:755096-755143:1:exon

position:755143:1
position: 755143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:765343-765667:1:exon

position:765343:1
position: 765343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:765667:1
position: 765667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:768774-768863:1:exon

position:768774:1
position: 768774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:768863:1
position: 768863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:773240-773388:1:exon

position:773240:1
position: 773240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:773388:1
position: 773388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:792641-792813:1:exon

position:792641:1
position: 792641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:792813:1
position: 792813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:796813-796989:1:exon

position:796813:1
position: 796813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:796989:1
position: 796989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:804797-804906:1:exon

position:804797:1
position: 804797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:804906:1
position: 804906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:819344-819451:1:exon

position:819344:1
position: 819344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:819451:1
position: 819451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:825786-825926:1:exon

position:825786:1
position: 825786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:825926:1
position: 825926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:830677-830814:1:exon

position:830677:1
position: 830677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:830814:1
position: 830814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:841001-841098:1:exon

position:841001:1
position: 841001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:841098:1
position: 841098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:842907-844566:1:exon

position:842907:1
position: 842907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAPKAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: MAPKAP1
product: MAPK associated protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 2 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032708402.1
SIO_010081: MAPKAP1
subclass of: SO_0000673
so part of: MAPKAP1
location: join(755328..755397,765343..765667,768774..768863,773240..773388,792641..792813,796813..796989,804797..804906,819344..819451,825786..825926,830677..830814,841001..841098,842907..844566)
location: region:755328-844566:1
so has part: feature:755328-755397:1:exon
so has part: feature:765343-765667:1:exon
so has part: feature:768774-768863:1:exon
so has part: feature:773240-773388:1:exon
so has part: feature:792641-792813:1:exon
so has part: feature:796813-796989:1:exon
so has part: feature:804797-804906:1:exon
so has part: feature:819344-819451:1:exon
so has part: feature:825786-825926:1:exon
so has part: feature:830677-830814:1:exon
so has part: feature:841001-841098:1:exon
so has part: feature:842907-844566:1:exon

position:755328:1
position: 755328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:755328-755397:1:exon

position:755397:1
position: 755397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:765343-765667:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:768774-768863:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:773240-773388:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:792641-792813:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:796813-796989:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:804797-804906:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:819344-819451:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:825786-825926:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:830677-830814:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:841001-841098:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:842907-844566:1:exon

MAPKAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: MAPKAP1
product: MAPK associated protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 2 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032708400.1
SIO_010081: MAPKAP1
subclass of: SO_0000673
so part of: MAPKAP1
location: join(755379..755397,762632..762731,765343..765667,768774..768863,773240..773388,792641..792813,796813..796989,804797..804906,819344..819451,825786..825926,830677..830814,841001..841098,842907..844566)
location: region:755379-844566:1
so has part: feature:755379-755397:1:exon
so has part: feature:762632-762731:1:exon
so has part: feature:765343-765667:1:exon
so has part: feature:768774-768863:1:exon
so has part: feature:773240-773388:1:exon
so has part: feature:792641-792813:1:exon
so has part: feature:796813-796989:1:exon
so has part: feature:804797-804906:1:exon
so has part: feature:819344-819451:1:exon
so has part: feature:825786-825926:1:exon
so has part: feature:830677-830814:1:exon
so has part: feature:841001-841098:1:exon
so has part: feature:842907-844566:1:exon

position:755379:1
position: 755379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:755379-755397:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:762632-762731:1:exon

position:762632:1
position: 762632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:762731:1
position: 762731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:765343-765667:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:768774-768863:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:773240-773388:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:792641-792813:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:796813-796989:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:804797-804906:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:819344-819451:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:825786-825926:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:830677-830814:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:841001-841098:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:842907-844566:1:exon

MAPKAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: MAPKAP1
product: MAPK associated protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032708403.1
SIO_010081: MAPKAP1
subclass of: SO_0000673
so part of: MAPKAP1
location: join(762632..762731,765343..765667,768774..768863,773240..773388,792641..792813,796813..796989,804797..804906,825786..825926,830677..830814,841001..841098,842907..843916)
location: region:762632-843916:1
so has part: feature:762632-762731:1:exon
so has part: feature:765343-765667:1:exon
so has part: feature:768774-768863:1:exon
so has part: feature:773240-773388:1:exon
so has part: feature:792641-792813:1:exon
so has part: feature:796813-796989:1:exon
so has part: feature:804797-804906:1:exon
so has part: feature:825786-825926:1:exon
so has part: feature:830677-830814:1:exon
so has part: feature:841001-841098:1:exon
so has part: feature:842907-843916:1:exon

position:843916:1
position: 843916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:762632-762731:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:765343-765667:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:768774-768863:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:773240-773388:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:792641-792813:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:796813-796989:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:804797-804906:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:825786-825926:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:830677-830814:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:841001-841098:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:842907-843916:1:exon

MAPKAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: MAPKAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: target of rapamycin complex 2 subunit MAPKAP1 isoform X1
translation: MAFLDNPTIILAHIRQSHVTSDDTGMCEMVLIDHDVDLEKFNPSSAYGDNGSEPQGSNGDTQGYVYSQSVDITSSWDFGIRRRSNTAQRLERLRKERQNQIKCKNVQWKDRNTSCSAEELSSLFEKKNFRVRSPCSGKQSILSVRLEQCPLQLNNPFNEYSKFDGKGHVGTTATKKIDVYLPLHTSQDKLQPMTVVTIANAKVHDLIGLICWQYTSEGREPKLNDNVNAYCLHIAEDDGEVDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLAAKQSLFVRINAAHGFSLIQVDSMKVTMKDILQKALKRRKGSQRGSGPQYRLEKQSEPNVPVDLDCTLESQSTLEFCLVRENSSRGEEVSEEDPQIDIATVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISIDSELLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVLKVNYILESRASTARADYFAQKQRKLSRRTSFSFQKEKKSGQQ
SIO_010081: MAPKAP1
subclass of: SO_0000673
so part of: MAPKAP1
location: join(765409..765667,768774..768863,773240..773388,792641..792813,796813..796989,804797..804906,819344..819451,825786..825926,830677..830814,841001..841098,842907..843032)
location: region:765409-843032:1
so has part: feature:765409-765667:1:exon
so has part: feature:768774-768863:1:exon
so has part: feature:773240-773388:1:exon
so has part: feature:792641-792813:1:exon
so has part: feature:796813-796989:1:exon
so has part: feature:804797-804906:1:exon
so has part: feature:819344-819451:1:exon
so has part: feature:825786-825926:1:exon
so has part: feature:830677-830814:1:exon
so has part: feature:841001-841098:1:exon
so has part: feature:842907-843032:1:exon

XP_032564291.1
type: Protein
SIO_000068: ncbiprotein

position:765409:1
position: 765409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:843032:1
position: 843032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:765409-765667:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:768774-768863:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:773240-773388:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:792641-792813:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:796813-796989:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:804797-804906:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:819344-819451:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:825786-825926:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:830677-830814:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:841001-841098:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:842907-843032:1:exon

MAPKAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: MAPKAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: target of rapamycin complex 2 subunit MAPKAP1 isoform X1
translation: MAFLDNPTIILAHIRQSHVTSDDTGMCEMVLIDHDVDLEKFNPSSAYGDNGSEPQGSNGDTQGYVYSQSVDITSSWDFGIRRRSNTAQRLERLRKERQNQIKCKNVQWKDRNTSCSAEELSSLFEKKNFRVRSPCSGKQSILSVRLEQCPLQLNNPFNEYSKFDGKGHVGTTATKKIDVYLPLHTSQDKLQPMTVVTIANAKVHDLIGLICWQYTSEGREPKLNDNVNAYCLHIAEDDGEVDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLAAKQSLFVRINAAHGFSLIQVDSMKVTMKDILQKALKRRKGSQRGSGPQYRLEKQSEPNVPVDLDCTLESQSTLEFCLVRENSSRGEEVSEEDPQIDIATVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISIDSELLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVLKVNYILESRASTARADYFAQKQRKLSRRTSFSFQKEKKSGQQ
SIO_010081: MAPKAP1
subclass of: SO_0000673
so part of: MAPKAP1
location: join(765409..765667,768774..768863,773240..773388,792641..792813,796813..796989,804797..804906,819344..819451,825786..825926,830677..830814,841001..841098,842907..843032)
location: region:765409-843032:1
so has part: feature:765409-765667:1:exon
so has part: feature:768774-768863:1:exon
so has part: feature:773240-773388:1:exon
so has part: feature:792641-792813:1:exon
so has part: feature:796813-796989:1:exon
so has part: feature:804797-804906:1:exon
so has part: feature:819344-819451:1:exon
so has part: feature:825786-825926:1:exon
so has part: feature:830677-830814:1:exon
so has part: feature:841001-841098:1:exon
so has part: feature:842907-843032:1:exon

XP_032564292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:765409-765667:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:768774-768863:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:773240-773388:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:792641-792813:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:796813-796989:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:804797-804906:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:819344-819451:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:825786-825926:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:830677-830814:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:841001-841098:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:842907-843032:1:exon

MAPKAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: MAPKAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: target of rapamycin complex 2 subunit MAPKAP1 isoform X1
translation: MAFLDNPTIILAHIRQSHVTSDDTGMCEMVLIDHDVDLEKFNPSSAYGDNGSEPQGSNGDTQGYVYSQSVDITSSWDFGIRRRSNTAQRLERLRKERQNQIKCKNVQWKDRNTSCSAEELSSLFEKKNFRVRSPCSGKQSILSVRLEQCPLQLNNPFNEYSKFDGKGHVGTTATKKIDVYLPLHTSQDKLQPMTVVTIANAKVHDLIGLICWQYTSEGREPKLNDNVNAYCLHIAEDDGEVDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLAAKQSLFVRINAAHGFSLIQVDSMKVTMKDILQKALKRRKGSQRGSGPQYRLEKQSEPNVPVDLDCTLESQSTLEFCLVRENSSRGEEVSEEDPQIDIATVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISIDSELLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVLKVNYILESRASTARADYFAQKQRKLSRRTSFSFQKEKKSGQQ
SIO_010081: MAPKAP1
subclass of: SO_0000673
so part of: MAPKAP1
location: join(765409..765667,768774..768863,773240..773388,792641..792813,796813..796989,804797..804906,819344..819451,825786..825926,830677..830814,841001..841098,842907..843032)
location: region:765409-843032:1
so has part: feature:765409-765667:1:exon
so has part: feature:768774-768863:1:exon
so has part: feature:773240-773388:1:exon
so has part: feature:792641-792813:1:exon
so has part: feature:796813-796989:1:exon
so has part: feature:804797-804906:1:exon
so has part: feature:819344-819451:1:exon
so has part: feature:825786-825926:1:exon
so has part: feature:830677-830814:1:exon
so has part: feature:841001-841098:1:exon
so has part: feature:842907-843032:1:exon

XP_032564293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:765409-765667:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:768774-768863:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:773240-773388:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:792641-792813:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:796813-796989:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:804797-804906:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:819344-819451:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:825786-825926:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:830677-830814:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:841001-841098:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:842907-843032:1:exon

MAPKAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: MAPKAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: target of rapamycin complex 2 subunit MAPKAP1 isoform X2
translation: MAFLDNPTIILAHIRQSHVTSDDTGMCEMVLIDHDVDLEKFNPSSAYGDNGSEPQGSNGDTQGYVYSQSVDITSSWDFGIRRRSNTAQRLERLRKERQNQIKCKNVQWKDRNTSCSAEELSSLFEKKNFRVRSPCSGKQSILSVRLEQCPLQLNNPFNEYSKFDGKGHVGTTATKKIDVYLPLHTSQDKLQPMTVVTIANAKVHDLIGLICWQYTSEGREPKLNDNVNAYCLHIAEDDGEVDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLAAKQSLFVRINAAHGFSLIQVDSMKVTMKDILQKALKRRKGSQRGSGSRGEEVSEEDPQIDIATVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISIDSELLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVLKVNYILESRASTARADYFAQKQRKLSRRTSFSFQKEKKSGQQ
SIO_010081: MAPKAP1
subclass of: SO_0000673
so part of: MAPKAP1
location: join(765409..765667,768774..768863,773240..773388,792641..792813,796813..796989,804797..804906,825786..825926,830677..830814,841001..841098,842907..843032)
location: region:765409-843032:1
so has part: feature:765409-765667:1:exon
so has part: feature:768774-768863:1:exon
so has part: feature:773240-773388:1:exon
so has part: feature:792641-792813:1:exon
so has part: feature:796813-796989:1:exon
so has part: feature:804797-804906:1:exon
so has part: feature:825786-825926:1:exon
so has part: feature:830677-830814:1:exon
so has part: feature:841001-841098:1:exon
so has part: feature:842907-843032:1:exon

XP_032564294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:765409-765667:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:768774-768863:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:773240-773388:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:792641-792813:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:796813-796989:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:804797-804906:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:825786-825926:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:830677-830814:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:841001-841098:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:842907-843032:1:exon

GAPVD1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: GAPVD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(857618..887553)
location: region:857618-887553:-1
so has part: feature:857618-887553:-1:exon
subclass of: SO_0000010

116797066
type: Gene
SIO_000068: ncbigene

position:857618:-1
position: 857618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887553:-1
position: 887553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:857618-887553:-1:exon

GAPVD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: GAPVD1
product: GTPase activating protein and VPS9 domains 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 22 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032708236.1
SIO_010081: GAPVD1
subclass of: SO_0000673
so part of: GAPVD1
location: complement(join(857618..861323,862012..862209,863236..863308,863870..864083,865418..865605,866055..866214,866798..866907,867301..867430,867914..868036,868686..868766,869146..869233,869744..870117,870247..870324,870778..870897,871437..871571,872171..872311,872586..872759,873570..873695,874405..874531,875311..875471,876288..876368,877313..877502,877610..877744,878943..879029,880219..881062,881423..881637,886922..886970,887481..887552))
location: region:857618-887552:-1
so has part: feature:887481-887552:-1:exon
so has part: feature:886922-886970:-1:exon
so has part: feature:881423-881637:-1:exon
so has part: feature:880219-881062:-1:exon
so has part: feature:878943-879029:-1:exon
so has part: feature:877610-877744:-1:exon
so has part: feature:877313-877502:-1:exon
so has part: feature:876288-876368:-1:exon
so has part: feature:875311-875471:-1:exon
so has part: feature:874405-874531:-1:exon
so has part: feature:873570-873695:-1:exon
so has part: feature:872586-872759:-1:exon
so has part: feature:872171-872311:-1:exon
so has part: feature:871437-871571:-1:exon
so has part: feature:870778-870897:-1:exon
so has part: feature:870247-870324:-1:exon
so has part: feature:869744-870117:-1:exon
so has part: feature:869146-869233:-1:exon
so has part: feature:868686-868766:-1:exon
so has part: feature:867914-868036:-1:exon
so has part: feature:867301-867430:-1:exon
so has part: feature:866798-866907:-1:exon
so has part: feature:866055-866214:-1:exon
so has part: feature:865418-865605:-1:exon
so has part: feature:863870-864083:-1:exon
so has part: feature:863236-863308:-1:exon
so has part: feature:862012-862209:-1:exon
so has part: feature:857618-861323:-1:exon

position:887552:-1
position: 887552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:887481-887552:-1:exon

position:887481:-1
position: 887481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:886922-886970:-1:exon

position:886922:-1
position: 886922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886970:-1
position: 886970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:881423-881637:-1:exon

position:881423:-1
position: 881423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:881637:-1
position: 881637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:880219-881062:-1:exon

position:880219:-1
position: 880219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:881062:-1
position: 881062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:878943-879029:-1:exon

position:878943:-1
position: 878943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:879029:-1
position: 879029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:877610-877744:-1:exon

position:877610:-1
position: 877610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:877744:-1
position: 877744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:877313-877502:-1:exon

position:877313:-1
position: 877313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:877502:-1
position: 877502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:876288-876368:-1:exon

position:876288:-1
position: 876288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:876368:-1
position: 876368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:875311-875471:-1:exon

position:875311:-1
position: 875311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875471:-1
position: 875471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:874405-874531:-1:exon

position:874405:-1
position: 874405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:874531:-1
position: 874531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:873570-873695:-1:exon

position:873570:-1
position: 873570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:873695:-1
position: 873695
reference: sequence
type: ReverseStrandPosition
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GAPVD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: GAPVD1
product: GTPase activating protein and VPS9 domains 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 19 ESTs, 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032708243.1
SIO_010081: GAPVD1
subclass of: SO_0000673
so part of: GAPVD1
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location: region:860604-887063:-1
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reference: sequence
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urn:…
SIO_000300: 1
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SIO_000300: 21
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SIO_000300: 22
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urn:…
SIO_000300: 23
SIO_000628: feature:863870-864083:-1:exon

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SIO_000300: 24
SIO_000628: feature:863236-863308:-1:exon

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SIO_000300: 25
SIO_000628: feature:862012-862209:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:860604-861323:-1:exon

GAPVD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: GAPVD1
product: GTPase activating protein and VPS9 domains 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 15 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032708238.1
SIO_010081: GAPVD1
subclass of: SO_0000673
so part of: GAPVD1
location: complement(join(861025..861323,862012..862209,863236..863308,863870..864083,865418..865605,866055..866214,866798..866907,867301..867430,867914..868036,868686..868766,869146..869233,869744..870117,870247..870324,870778..870897,871437..871571,872171..872233,872586..872759,873570..873695,874405..874531,875311..875471,876288..876368,877313..877502,877610..877744,878943..879029,880219..881062,881423..881637,886922..886970,887481..887553))
location: region:861025-887553:-1
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position:861025:-1
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reference: sequence
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 28
SIO_000628: feature:861025-861323:-1:exon

GAPVD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: GAPVD1
product: GTPase activating protein and VPS9 domains 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 17 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032708242.1
SIO_010081: GAPVD1
subclass of: SO_0000673
so part of: GAPVD1
location: complement(join(861025..861323,862012..862209,863236..863308,863870..864083,865418..865605,866055..866214,866798..866907,867301..867430,867914..868036,868686..868766,869146..869233,869744..870117,870247..870324,870778..870897,871437..871571,872171..872311,872586..872759,873570..873695,874468..874531,875311..875471,877313..877502,877610..877744,878943..879029,880219..881062,881423..881637,886922..886970,887481..887552))
location: region:861025-887552:-1
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urn:…
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position:874468:-1
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reference: sequence
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urn:…
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urn:…
SIO_000300: 27
SIO_000628: feature:861025-861323:-1:exon

GAPVD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: GAPVD1
product: GTPase activating protein and VPS9 domains 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 18 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032708239.1
SIO_010081: GAPVD1
subclass of: SO_0000673
so part of: GAPVD1
location: complement(join(861025..861323,862012..862209,863236..863308,863870..864083,865418..865605,866055..866214,866798..866907,867301..867430,867914..868036,868686..868766,869146..869233,869744..870117,870247..870324,870778..870897,871437..871571,872171..872311,872586..872759,873570..873695,874405..874531,875311..875471,877313..877502,877610..877744,878943..879029,880219..881062,881423..881637,886922..886970,887481..887552))
location: region:861025-887552:-1
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so has part: feature:872171-872311:-1:exon
so has part: feature:871437-871571:-1:exon
so has part: feature:870778-870897:-1:exon
so has part: feature:870247-870324:-1:exon
so has part: feature:869744-870117:-1:exon
so has part: feature:869146-869233:-1:exon
so has part: feature:868686-868766:-1:exon
so has part: feature:867914-868036:-1:exon
so has part: feature:867301-867430:-1:exon
so has part: feature:866798-866907:-1:exon
so has part: feature:866055-866214:-1:exon
so has part: feature:865418-865605:-1:exon
so has part: feature:863870-864083:-1:exon
so has part: feature:863236-863308:-1:exon
so has part: feature:862012-862209:-1:exon
so has part: feature:861025-861323:-1:exon

urn:…
SIO_000300: 1
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urn:…
SIO_000300: 2
SIO_000628: feature:886922-886970:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:881423-881637:-1:exon

urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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urn:…
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SIO_000628: feature:877610-877744:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:877313-877502:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:875311-875471:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:874405-874531:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:873570-873695:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:872586-872759:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:872171-872311:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:871437-871571:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:870778-870897:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:870247-870324:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:869744-870117:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:869146-869233:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:868686-868766:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:867914-868036:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:867301-867430:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:866798-866907:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:866055-866214:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:865418-865605:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:863870-864083:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:863236-863308:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:862012-862209:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:861025-861323:-1:exon

GAPVD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: GAPVD1
product: GTPase activating protein and VPS9 domains 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 17 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032708237.1
SIO_010081: GAPVD1
subclass of: SO_0000673
so part of: GAPVD1
location: complement(join(861025..861323,862012..862209,863236..863308,863870..864083,865418..865605,866055..866214,866798..866907,867301..867430,867914..868036,868686..868766,869146..869233,869744..870117,870247..870324,870778..870897,871437..871571,872171..872311,872586..872759,873570..873695,874468..874531,875311..875471,876288..876368,877313..877502,877610..877744,878943..879029,880219..881062,881423..881637,886922..886970,887481..887552))
location: region:861025-887552:-1
so has part: feature:887481-887552:-1:exon
so has part: feature:886922-886970:-1:exon
so has part: feature:881423-881637:-1:exon
so has part: feature:880219-881062:-1:exon
so has part: feature:878943-879029:-1:exon
so has part: feature:877610-877744:-1:exon
so has part: feature:877313-877502:-1:exon
so has part: feature:876288-876368:-1:exon
so has part: feature:875311-875471:-1:exon
so has part: feature:874468-874531:-1:exon
so has part: feature:873570-873695:-1:exon
so has part: feature:872586-872759:-1:exon
so has part: feature:872171-872311:-1:exon
so has part: feature:871437-871571:-1:exon
so has part: feature:870778-870897:-1:exon
so has part: feature:870247-870324:-1:exon
so has part: feature:869744-870117:-1:exon
so has part: feature:869146-869233:-1:exon
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so has part: feature:867301-867430:-1:exon
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so has part: feature:865418-865605:-1:exon
so has part: feature:863870-864083:-1:exon
so has part: feature:863236-863308:-1:exon
so has part: feature:862012-862209:-1:exon
so has part: feature:861025-861323:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:887481-887552:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:886922-886970:-1:exon

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SIO_000300: 3
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SIO_000300: 5
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SIO_000300: 6
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urn:…
SIO_000300: 7
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SIO_000300: 8
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urn:…
SIO_000300: 9
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urn:…
SIO_000300: 10
SIO_000628: feature:874468-874531:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:873570-873695:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:872586-872759:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:872171-872311:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:871437-871571:-1:exon

urn:…
SIO_000300: 15
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urn:…
SIO_000300: 16
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urn:…
SIO_000300: 17
SIO_000628: feature:869744-870117:-1:exon

urn:…
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urn:…
SIO_000300: 19
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urn:…
SIO_000300: 20
SIO_000628: feature:867914-868036:-1:exon

urn:…
SIO_000300: 21
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urn:…
SIO_000300: 22
SIO_000628: feature:866798-866907:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:866055-866214:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:865418-865605:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:863870-864083:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:863236-863308:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:862012-862209:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:861025-861323:-1:exon

GAPVD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: GAPVD1
product: GTPase activating protein and VPS9 domains 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 15 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032708241.1
SIO_010081: GAPVD1
subclass of: SO_0000673
so part of: GAPVD1
location: complement(join(861025..861323,862012..862209,863236..863308,863870..864083,865418..865605,866055..866214,866798..866907,867301..867430,867914..868036,868686..868766,869146..869233,869744..870117,870247..870324,870778..870897,871437..871571,872586..872759,873570..873695,874405..874531,875311..875471,876288..876368,877313..877502,877610..877744,878943..879029,880219..881062,881423..881637,886922..886970,887481..887552))
location: region:861025-887552:-1
so has part: feature:887481-887552:-1:exon
so has part: feature:886922-886970:-1:exon
so has part: feature:881423-881637:-1:exon
so has part: feature:880219-881062:-1:exon
so has part: feature:878943-879029:-1:exon
so has part: feature:877610-877744:-1:exon
so has part: feature:877313-877502:-1:exon
so has part: feature:876288-876368:-1:exon
so has part: feature:875311-875471:-1:exon
so has part: feature:874405-874531:-1:exon
so has part: feature:873570-873695:-1:exon
so has part: feature:872586-872759:-1:exon
so has part: feature:871437-871571:-1:exon
so has part: feature:870778-870897:-1:exon
so has part: feature:870247-870324:-1:exon
so has part: feature:869744-870117:-1:exon
so has part: feature:869146-869233:-1:exon
so has part: feature:868686-868766:-1:exon
so has part: feature:867914-868036:-1:exon
so has part: feature:867301-867430:-1:exon
so has part: feature:866798-866907:-1:exon
so has part: feature:866055-866214:-1:exon
so has part: feature:865418-865605:-1:exon
so has part: feature:863870-864083:-1:exon
so has part: feature:863236-863308:-1:exon
so has part: feature:862012-862209:-1:exon
so has part: feature:861025-861323:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:887481-887552:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:886922-886970:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:881423-881637:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:880219-881062:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:878943-879029:-1:exon

urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
SIO_000628: feature:877313-877502:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:876288-876368:-1:exon

urn:…
SIO_000300: 9
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urn:…
SIO_000300: 10
SIO_000628: feature:874405-874531:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:873570-873695:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:872586-872759:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:871437-871571:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:870778-870897:-1:exon

urn:…
SIO_000300: 15
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urn:…
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urn:…
SIO_000300: 17
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urn:…
SIO_000300: 18
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urn:…
SIO_000300: 19
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urn:…
SIO_000300: 20
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SIO_000300: 21
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SIO_000300: 22
SIO_000628: feature:866055-866214:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:865418-865605:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:863870-864083:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:863236-863308:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:862012-862209:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:861025-861323:-1:exon

GAPVD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: GAPVD1
product: GTPase activating protein and VPS9 domains 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 17 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032708240.1
SIO_010081: GAPVD1
subclass of: SO_0000673
so part of: GAPVD1
location: complement(join(861025..861323,862012..862209,863236..863308,863870..864083,865418..865605,866055..866214,866798..866907,867301..867430,867914..868036,868686..868766,869146..869233,869744..870117,870247..870324,870778..870897,871437..871571,872171..872311,872586..872759,873570..873695,874405..874531,875311..875471,876288..876368,877313..877502,877610..877744,878943..879029,880219..881062,881423..881637,886498..886731))
location: region:861025-886731:-1
so has part: feature:886498-886731:-1:exon
so has part: feature:881423-881637:-1:exon
so has part: feature:880219-881062:-1:exon
so has part: feature:878943-879029:-1:exon
so has part: feature:877610-877744:-1:exon
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so has part: feature:872171-872311:-1:exon
so has part: feature:871437-871571:-1:exon
so has part: feature:870778-870897:-1:exon
so has part: feature:870247-870324:-1:exon
so has part: feature:869744-870117:-1:exon
so has part: feature:869146-869233:-1:exon
so has part: feature:868686-868766:-1:exon
so has part: feature:867914-868036:-1:exon
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so has part: feature:866798-866907:-1:exon
so has part: feature:866055-866214:-1:exon
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so has part: feature:863870-864083:-1:exon
so has part: feature:863236-863308:-1:exon
so has part: feature:862012-862209:-1:exon
so has part: feature:861025-861323:-1:exon

position:886731:-1
position: 886731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:886498-886731:-1:exon

position:886498:-1
position: 886498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:881423-881637:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:880219-881062:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:878943-879029:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:877610-877744:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:877313-877502:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:876288-876368:-1:exon

urn:…
SIO_000300: 8
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urn:…
SIO_000300: 9
SIO_000628: feature:874405-874531:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:873570-873695:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:872586-872759:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:872171-872311:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:871437-871571:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:870778-870897:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:870247-870324:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:869744-870117:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:869146-869233:-1:exon

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SIO_000300: 18
SIO_000628: feature:868686-868766:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:867914-868036:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:867301-867430:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:866798-866907:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:866055-866214:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:865418-865605:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:863870-864083:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:863236-863308:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:862012-862209:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:861025-861323:-1:exon

GAPVD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: GAPVD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTPase-activating protein and VPS9 domain-containing protein 1 isoform X7
translation: MVTGGGGAAASRGHRGAARGKAGGRAETEPSRWVLCHPWLPTMVKLDIHTLAHHLKQERLYVTAEKQLIQRLNADVLKTAEKLYRTAWISKQQRINLDRLIITSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLNRLRENPRLIASCLVAGEKLNQDNTQSVIHTVFTSIYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSILFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDANKLIERFSPVQQEKLFGEKGTEKFKQRVQEMVDSNEAKLVTLVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVGEVRAMCTDLLLACFICPAIVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGDPRTKSSLAKFDKSCVAAFLDVVIDGRAVETPPMSAVNLLEGLSRTVVYMTYSQLTTLVGFMRNVMSSDQLKEDRMALENLLANLPQNKPGKSSSLEMTPYNTPQLSPATTPANKKNRLPIATRSRSRSNILMDQHGDHEGSSQETIPEVQPEEVLVISLGTGPQITPGMMSENEVLNMQLADGGQDVPIDENKLHGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNMDEDRLQEIAGAAAENMLGSLLCLPGSGSVLLDPCTGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDMDETAHGASQLTSPPSQTDSLLALFDPLSSNEGVSAVVRPKVHYARPSHPPPDPPILEGAVGGNEARLPNFGSHSLIPTDLEAFKQRHSYPERLVRSRSSDIVSSVRRPMSDPGWNRRPGNEDRELPMATSSAGAAVLAATSQSSSSSPSKDSSRGEIEERKDSDDEKSDRNKPWWRKRFASAMPKAPIPFRKKEKQEKDKDDMVPDRYATLQDDPSPRLSAQAQAAEDILDKYRNAIKRSSPSEGAIVNYDSAEALGDGESMHDSPRDEALQNMSADDLPDSASQVAQPQSSAFSYRDAKKKLRLALCSADSVAFPMLTHSTRNGLPDHTDPEDNEIVCFLKVQLAEAINLQDKNLMAQLQETMRCVSRFDNRTCRKLLASIAEDYRKRAPYIAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIREFIQDFQKLTAADDKTAQVEDFLQFLYGAMAQDAIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHKALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYANCLSGEESYWWMQFTAAVEFIKTIDDRK
SIO_010081: GAPVD1
subclass of: SO_0000673
so part of: GAPVD1
location: complement(join(861183..861323,862012..862209,863236..863308,863870..864083,865418..865605,866055..866214,866798..866907,867301..867430,867914..868036,868686..868766,869146..869233,869744..870117,870247..870324,870778..870897,871437..871571,872171..872311,872586..872759,873570..873695,874468..874531,875311..875471,877313..877502,877610..877744,878943..879029,880219..881062,881423..881637,886922..886970,887481..887527))
location: region:861183-887527:-1
so has part: feature:887481-887527:-1:exon
so has part: feature:886922-886970:-1:exon
so has part: feature:881423-881637:-1:exon
so has part: feature:880219-881062:-1:exon
so has part: feature:878943-879029:-1:exon
so has part: feature:877610-877744:-1:exon
so has part: feature:877313-877502:-1:exon
so has part: feature:875311-875471:-1:exon
so has part: feature:874468-874531:-1:exon
so has part: feature:873570-873695:-1:exon
so has part: feature:872586-872759:-1:exon
so has part: feature:872171-872311:-1:exon
so has part: feature:871437-871571:-1:exon
so has part: feature:870778-870897:-1:exon
so has part: feature:870247-870324:-1:exon
so has part: feature:869744-870117:-1:exon
so has part: feature:869146-869233:-1:exon
so has part: feature:868686-868766:-1:exon
so has part: feature:867914-868036:-1:exon
so has part: feature:867301-867430:-1:exon
so has part: feature:866798-866907:-1:exon
so has part: feature:866055-866214:-1:exon
so has part: feature:865418-865605:-1:exon
so has part: feature:863870-864083:-1:exon
so has part: feature:863236-863308:-1:exon
so has part: feature:862012-862209:-1:exon
so has part: feature:861183-861323:-1:exon

XP_032564133.1
type: Protein
SIO_000068: ncbiprotein

position:861183:-1
position: 861183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887527:-1
position: 887527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:887481-887527:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:886922-886970:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:881423-881637:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:880219-881062:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:878943-879029:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:877610-877744:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:877313-877502:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:875311-875471:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:874468-874531:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:873570-873695:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:872586-872759:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:872171-872311:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:871437-871571:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:870778-870897:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:870247-870324:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:869744-870117:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:869146-869233:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:868686-868766:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:867914-868036:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:867301-867430:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:866798-866907:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:866055-866214:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:865418-865605:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:863870-864083:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:863236-863308:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:862012-862209:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:861183-861323:-1:exon

GAPVD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: GAPVD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTPase-activating protein and VPS9 domain-containing protein 1 isoform X4
translation: MVTGGGGAAASRGHRGAARGKAGGRAETEPSRWVLCHPWLPTMVKLDIHTLAHHLKQERLYVTAEKQLIQRLNADVLKTAEKLYRTAWISKQQRINLDRLIITSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLNRLRENPRLIASCLVAGEKLNQDNTQSVIHTVFTSIYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSILFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDANKLIERFSPVQQEKLFGEKGTEKFKQRVQEMVDSNEAKLVTLVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVGEVRAMCTDLLLACFICPAIVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGDPRTKSSLAKFDKSCVAAFLDVVIDGRAVETPPMSAVNLLEGLSRTVVYMTYSQLTTLVGFMRNVMSSDQLKEDRMALENLLANLPQNKPGKSSSLEMTPYNTPQLSPATTPANKKNRLPIATRSRSRSNILMDQHGDHEGSSQETIPEVQPEEVLVISLGTGPQITPGMMSENEVLNMQLADGGQDVPIDENKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNMDEDRLQEIAGAAAENMLGSLLCLPGSGSVLLDPCTGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDMDETAHGASQLTSPPSQTDSLLALFDPLSSNEGVSAVVRPKVHYARPSHPPPDPPILEGAVGGNEARLPNFGSHSLIPTDLEAFKQRHSYPERLVRSRSSDIVSSVRRPMSDPGWNRRPGNEDRELPMATSSAGAAVLAATSQSSSSSPSKDSSRGEIEERKDSDDEKSDRNKPWWRKRFASAMPKAPIPFRKKEKQEKDKDDMVPDRYATLQDDPSPRLSAQAQAAEDILDKYRNAIKRSSPSEGAIVNYDSAEALGDGESMHDSPRDEALQNMSADDLPDSASQVAQPQSSAFSYRDAKKKLRLALCSADSVAFPMLTHSTRNGLPDHTDPEDNEIVCFLKVQLAEAINLQDKNLMAQLQETMRCVSRFDNRTCRKLLASIAEDYRKRAPYIAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIREFIQDFQKLTAADDKTAQVEDFLQFLYGAMAQDAIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHKALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYANCLSGEESYWWMQFTAAVEFIKTIDDRK
SIO_010081: GAPVD1
subclass of: SO_0000673
so part of: GAPVD1
location: complement(join(861183..861323,862012..862209,863236..863308,863870..864083,865418..865605,866055..866214,866798..866907,867301..867430,867914..868036,868686..868766,869146..869233,869744..870117,870247..870324,870778..870897,871437..871571,872171..872311,872586..872759,873570..873695,874405..874531,875311..875471,877313..877502,877610..877744,878943..879029,880219..881062,881423..881637,886922..886970,887481..887527))
location: region:861183-887527:-1
so has part: feature:887481-887527:-1:exon
so has part: feature:886922-886970:-1:exon
so has part: feature:881423-881637:-1:exon
so has part: feature:880219-881062:-1:exon
so has part: feature:878943-879029:-1:exon
so has part: feature:877610-877744:-1:exon
so has part: feature:877313-877502:-1:exon
so has part: feature:875311-875471:-1:exon
so has part: feature:874405-874531:-1:exon
so has part: feature:873570-873695:-1:exon
so has part: feature:872586-872759:-1:exon
so has part: feature:872171-872311:-1:exon
so has part: feature:871437-871571:-1:exon
so has part: feature:870778-870897:-1:exon
so has part: feature:870247-870324:-1:exon
so has part: feature:869744-870117:-1:exon
so has part: feature:869146-869233:-1:exon
so has part: feature:868686-868766:-1:exon
so has part: feature:867914-868036:-1:exon
so has part: feature:867301-867430:-1:exon
so has part: feature:866798-866907:-1:exon
so has part: feature:866055-866214:-1:exon
so has part: feature:865418-865605:-1:exon
so has part: feature:863870-864083:-1:exon
so has part: feature:863236-863308:-1:exon
so has part: feature:862012-862209:-1:exon
so has part: feature:861183-861323:-1:exon

XP_032564130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:887481-887527:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:886922-886970:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:881423-881637:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:880219-881062:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:878943-879029:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:877610-877744:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:877313-877502:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:875311-875471:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:874405-874531:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:873570-873695:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:872586-872759:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:872171-872311:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:871437-871571:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:870778-870897:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:870247-870324:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:869744-870117:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:869146-869233:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:868686-868766:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:867914-868036:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:867301-867430:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:866798-866907:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:866055-866214:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:865418-865605:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:863870-864083:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:863236-863308:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:862012-862209:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:861183-861323:-1:exon

GAPVD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: GAPVD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTPase-activating protein and VPS9 domain-containing protein 1 isoform X2
translation: MVTGGGGAAASRGHRGAARGKAGGRAETEPSRWVLCHPWLPTMVKLDIHTLAHHLKQERLYVTAEKQLIQRLNADVLKTAEKLYRTAWISKQQRINLDRLIITSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLNRLRENPRLIASCLVAGEKLNQDNTQSVIHTVFTSIYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSILFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDANKLIERFSPVQQEKLFGEKGTEKFKQRVQEMVDSNEAKLVTLVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVGEVRAMCTDLLLACFICPAIVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGDPRTKSSLAKFDKSCVAAFLDVVIDGRAVETPPMSAVNLLEGLSRTVVYMTYSQLTTLVGFMRNVMSSDQLKEDRMALENLLANLPQNKPGKSSSLEMTPYNTPQLSPATTPANKKNRLPIGQQLAAITAWDTSATNLSAHITLVTPFATRSRSRSNILMDQHGDHEGSSQETIPEVQPEEVLVISLGTGPQITPGMMSENEVLNMQLADGGQDVPIDENKLHGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNMDEDRLQEIAGAAAENMLGSLLCLPGSGSVLLDPCTGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDMDETAHGASQLTSPPSQTDSLLALFDPLSSNEGVSAVVRPKVHYARPSHPPPDPPILEGAVGGNEARLPNFGSHSLIPTDLEAFKQRHSYPERLVRSRSSDIVSSVRRPMSDPGWNRRPGNEDRELPMATSSAGAAVLAATSQSSSSSPSKDSSRGEIEERKDSDDEKSDRNKPWWRKRFASAMPKAPIPFRKKEKQEKDKDDMVPDRYATLQDDPSPRLSAQAQAAEDILDKYRNAIKRSSPSEGAIVNYDSAEALGDGESMHDSPRDEALQNMSADDLPDSASQVAQPQSSAFSYRDAKKKLRLALCSADSVAFPMLTHSTRNGLPDHTDPEDNEIVCFLKVQLAEAINLQDKNLMAQLQETMRCVSRFDNRTCRKLLASIAEDYRKRAPYIAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIREFIQDFQKLTAADDKTAQVEDFLQFLYGAMAQDAIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHKALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYANCLSGEESYWWMQFTAAVEFIKTIDDRK
SIO_010081: GAPVD1
subclass of: SO_0000673
so part of: GAPVD1
location: complement(join(861183..861323,862012..862209,863236..863308,863870..864083,865418..865605,866055..866214,866798..866907,867301..867430,867914..868036,868686..868766,869146..869233,869744..870117,870247..870324,870778..870897,871437..871571,872171..872311,872586..872759,873570..873695,874468..874531,875311..875471,876288..876368,877313..877502,877610..877744,878943..879029,880219..881062,881423..881637,886922..886970,887481..887527))
location: region:861183-887527:-1
so has part: feature:887481-887527:-1:exon
so has part: feature:886922-886970:-1:exon
so has part: feature:881423-881637:-1:exon
so has part: feature:880219-881062:-1:exon
so has part: feature:878943-879029:-1:exon
so has part: feature:877610-877744:-1:exon
so has part: feature:877313-877502:-1:exon
so has part: feature:876288-876368:-1:exon
so has part: feature:875311-875471:-1:exon
so has part: feature:874468-874531:-1:exon
so has part: feature:873570-873695:-1:exon
so has part: feature:872586-872759:-1:exon
so has part: feature:872171-872311:-1:exon
so has part: feature:871437-871571:-1:exon
so has part: feature:870778-870897:-1:exon
so has part: feature:870247-870324:-1:exon
so has part: feature:869744-870117:-1:exon
so has part: feature:869146-869233:-1:exon
so has part: feature:868686-868766:-1:exon
so has part: feature:867914-868036:-1:exon
so has part: feature:867301-867430:-1:exon
so has part: feature:866798-866907:-1:exon
so has part: feature:866055-866214:-1:exon
so has part: feature:865418-865605:-1:exon
so has part: feature:863870-864083:-1:exon
so has part: feature:863236-863308:-1:exon
so has part: feature:862012-862209:-1:exon
so has part: feature:861183-861323:-1:exon

XP_032564128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:887481-887527:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:886922-886970:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:881423-881637:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:880219-881062:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:878943-879029:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:877610-877744:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:877313-877502:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:876288-876368:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:875311-875471:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:874468-874531:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:873570-873695:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:872586-872759:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:872171-872311:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:871437-871571:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:870778-870897:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:870247-870324:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:869744-870117:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:869146-869233:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:868686-868766:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:867914-868036:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:867301-867430:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:866798-866907:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:866055-866214:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:865418-865605:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:863870-864083:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:863236-863308:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:862012-862209:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:861183-861323:-1:exon

GAPVD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: GAPVD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTPase-activating protein and VPS9 domain-containing protein 1 isoform X6
translation: MVTGGGGAAASRGHRGAARGKAGGRAETEPSRWVLCHPWLPTMVKLDIHTLAHHLKQERLYVTAEKQLIQRLNADVLKTAEKLYRTAWISKQQRINLDRLIITSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLNRLRENPRLIASCLVAGEKLNQDNTQSVIHTVFTSIYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSILFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDANKLIERFSPVQQEKLFGEKGTEKFKQRVQEMVDSNEAKLVTLVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVGEVRAMCTDLLLACFICPAIVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGDPRTKSSLAKFDKSCVAAFLDVVIDGRAVETPPMSAVNLLEGLSRTVVYMTYSQLTTLVGFMRNVMSSDQLKEDRMALENLLANLPQNKPGKSSSLEMTPYNTPQLSPATTPANKKNRLPIGQQLAAITAWDTSATNLSAHITLVTPFATRSRSRSNILMDQHGDHEGSSQETIPEVQPEEVLVISLGTGPQITPGMMSENEVLNMQLADGGQDVPIDENKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNMDEDRLQEIAEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDMDETAHGASQLTSPPSQTDSLLALFDPLSSNEGVSAVVRPKVHYARPSHPPPDPPILEGAVGGNEARLPNFGSHSLIPTDLEAFKQRHSYPERLVRSRSSDIVSSVRRPMSDPGWNRRPGNEDRELPMATSSAGAAVLAATSQSSSSSPSKDSSRGEIEERKDSDDEKSDRNKPWWRKRFASAMPKAPIPFRKKEKQEKDKDDMVPDRYATLQDDPSPRLSAQAQAAEDILDKYRNAIKRSSPSEGAIVNYDSAEALGDGESMHDSPRDEALQNMSADDLPDSASQVAQPQSSAFSYRDAKKKLRLALCSADSVAFPMLTHSTRNGLPDHTDPEDNEIVCFLKVQLAEAINLQDKNLMAQLQETMRCVSRFDNRTCRKLLASIAEDYRKRAPYIAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIREFIQDFQKLTAADDKTAQVEDFLQFLYGAMAQDAIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHKALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYANCLSGEESYWWMQFTAAVEFIKTIDDRK
SIO_010081: GAPVD1
subclass of: SO_0000673
so part of: GAPVD1
location: complement(join(861183..861323,862012..862209,863236..863308,863870..864083,865418..865605,866055..866214,866798..866907,867301..867430,867914..868036,868686..868766,869146..869233,869744..870117,870247..870324,870778..870897,871437..871571,872586..872759,873570..873695,874405..874531,875311..875471,876288..876368,877313..877502,877610..877744,878943..879029,880219..881062,881423..881637,886922..886970,887481..887527))
location: region:861183-887527:-1
so has part: feature:887481-887527:-1:exon
so has part: feature:886922-886970:-1:exon
so has part: feature:881423-881637:-1:exon
so has part: feature:880219-881062:-1:exon
so has part: feature:878943-879029:-1:exon
so has part: feature:877610-877744:-1:exon
so has part: feature:877313-877502:-1:exon
so has part: feature:876288-876368:-1:exon
so has part: feature:875311-875471:-1:exon
so has part: feature:874405-874531:-1:exon
so has part: feature:873570-873695:-1:exon
so has part: feature:872586-872759:-1:exon
so has part: feature:871437-871571:-1:exon
so has part: feature:870778-870897:-1:exon
so has part: feature:870247-870324:-1:exon
so has part: feature:869744-870117:-1:exon
so has part: feature:869146-869233:-1:exon
so has part: feature:868686-868766:-1:exon
so has part: feature:867914-868036:-1:exon
so has part: feature:867301-867430:-1:exon
so has part: feature:866798-866907:-1:exon
so has part: feature:866055-866214:-1:exon
so has part: feature:865418-865605:-1:exon
so has part: feature:863870-864083:-1:exon
so has part: feature:863236-863308:-1:exon
so has part: feature:862012-862209:-1:exon
so has part: feature:861183-861323:-1:exon

XP_032564132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:887481-887527:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:886922-886970:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:881423-881637:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:880219-881062:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:878943-879029:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:877610-877744:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:877313-877502:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:876288-876368:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:875311-875471:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:874405-874531:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:873570-873695:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:872586-872759:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:871437-871571:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:870778-870897:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:870247-870324:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:869744-870117:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:869146-869233:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:868686-868766:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:867914-868036:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:867301-867430:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:866798-866907:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:866055-866214:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:865418-865605:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:863870-864083:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:863236-863308:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:862012-862209:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:861183-861323:-1:exon

GAPVD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: GAPVD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTPase-activating protein and VPS9 domain-containing protein 1 isoform X3
translation: MVTGGGGAAASRGHRGAARGKAGGRAETEPSRWVLCHPWLPTMVKLDIHTLAHHLKQERLYVTAEKQLIQRLNADVLKTAEKLYRTAWISKQQRINLDRLIITSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLNRLRENPRLIASCLVAGEKLNQDNTQSVIHTVFTSIYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSILFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDANKLIERFSPVQQEKLFGEKGTEKFKQRVQEMVDSNEAKLVTLVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVGEVRAMCTDLLLACFICPAIVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGDPRTKSSLAKFDKSCVAAFLDVVIDGRAVETPPMSAVNLLEGLSRTVVYMTYSQLTTLVGFMRNVMSSDQLKEDRMALENLLANLPQNKPGKSSSLEMTPYNTPQLSPATTPANKKNRLPIGQQLAAITAWDTSATNLSAHITLVTPFATRSRSRSNILMDQHGDHEGSSQETIPEVQPEEVLVISLGTGPQITPGMMSENEVLNMQLADGGQDVPIDENKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNMDEDRLQEIAGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDMDETAHGASQLTSPPSQTDSLLALFDPLSSNEGVSAVVRPKVHYARPSHPPPDPPILEGAVGGNEARLPNFGSHSLIPTDLEAFKQRHSYPERLVRSRSSDIVSSVRRPMSDPGWNRRPGNEDRELPMATSSAGAAVLAATSQSSSSSPSKDSSRGEIEERKDSDDEKSDRNKPWWRKRFASAMPKAPIPFRKKEKQEKDKDDMVPDRYATLQDDPSPRLSAQAQAAEDILDKYRNAIKRSSPSEGAIVNYDSAEALGDGESMHDSPRDEALQNMSADDLPDSASQVAQPQSSAFSYRDAKKKLRLALCSADSVAFPMLTHSTRNGLPDHTDPEDNEIVCFLKVQLAEAINLQDKNLMAQLQETMRCVSRFDNRTCRKLLASIAEDYRKRAPYIAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIREFIQDFQKLTAADDKTAQVEDFLQFLYGAMAQDAIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHKALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYANCLSGEESYWWMQFTAAVEFIKTIDDRK
SIO_010081: GAPVD1
subclass of: SO_0000673
so part of: GAPVD1
location: complement(join(861183..861323,862012..862209,863236..863308,863870..864083,865418..865605,866055..866214,866798..866907,867301..867430,867914..868036,868686..868766,869146..869233,869744..870117,870247..870324,870778..870897,871437..871571,872171..872233,872586..872759,873570..873695,874405..874531,875311..875471,876288..876368,877313..877502,877610..877744,878943..879029,880219..881062,881423..881637,886922..886970,887481..887527))
location: region:861183-887527:-1
so has part: feature:887481-887527:-1:exon
so has part: feature:886922-886970:-1:exon
so has part: feature:881423-881637:-1:exon
so has part: feature:880219-881062:-1:exon
so has part: feature:878943-879029:-1:exon
so has part: feature:877610-877744:-1:exon
so has part: feature:877313-877502:-1:exon
so has part: feature:876288-876368:-1:exon
so has part: feature:875311-875471:-1:exon
so has part: feature:874405-874531:-1:exon
so has part: feature:873570-873695:-1:exon
so has part: feature:872586-872759:-1:exon
so has part: feature:872171-872233:-1:exon
so has part: feature:871437-871571:-1:exon
so has part: feature:870778-870897:-1:exon
so has part: feature:870247-870324:-1:exon
so has part: feature:869744-870117:-1:exon
so has part: feature:869146-869233:-1:exon
so has part: feature:868686-868766:-1:exon
so has part: feature:867914-868036:-1:exon
so has part: feature:867301-867430:-1:exon
so has part: feature:866798-866907:-1:exon
so has part: feature:866055-866214:-1:exon
so has part: feature:865418-865605:-1:exon
so has part: feature:863870-864083:-1:exon
so has part: feature:863236-863308:-1:exon
so has part: feature:862012-862209:-1:exon
so has part: feature:861183-861323:-1:exon

XP_032564129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:887481-887527:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:886922-886970:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:881423-881637:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:880219-881062:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:878943-879029:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:877610-877744:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:877313-877502:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:876288-876368:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:875311-875471:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:874405-874531:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:873570-873695:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:872586-872759:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:872171-872233:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:871437-871571:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:870778-870897:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:870247-870324:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:869744-870117:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:869146-869233:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:868686-868766:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:867914-868036:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:867301-867430:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:866798-866907:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:866055-866214:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:865418-865605:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:863870-864083:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:863236-863308:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:862012-862209:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:861183-861323:-1:exon

GAPVD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: GAPVD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
translation: MVTGGGGAAASRGHRGAARGKAGGRAETEPSRWVLCHPWLPTMVKLDIHTLAHHLKQERLYVTAEKQLIQRLNADVLKTAEKLYRTAWISKQQRINLDRLIITSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLNRLRENPRLIASCLVAGEKLNQDNTQSVIHTVFTSIYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSILFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDANKLIERFSPVQQEKLFGEKGTEKFKQRVQEMVDSNEAKLVTLVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVGEVRAMCTDLLLACFICPAIVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGDPRTKSSLAKFDKSCVAAFLDVVIDGRAVETPPMSAVNLLEGLSRTVVYMTYSQLTTLVGFMRNVMSSDQLKEDRMALENLLANLPQNKPGKSSSLEMTPYNTPQLSPATTPANKKNRLPIGQQLAAITAWDTSATNLSAHITLVTPFATRSRSRSNILMDQHGDHEGSSQETIPEVQPEEVLVISLGTGPQITPGMMSENEVLNMQLADGGQDVPIDENKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNMDEDRLQEIAGAAAENMLGSLLCLPGSGSVLLDPCTGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDMDETAHGASQLTSPPSQTDSLLALFDPLSSNEGVSAVVRPKVHYARPSHPPPDPPILEGAVGGNEARLPNFGSHSLIPTDLEAFKQRHSYPERLVRSRSSDIVSSVRRPMSDPGWNRRPGNEDRELPMATSSAGAAVLAATSQSSSSSPSKDSSRGEIEERKDSDDEKSDRNKPWWRKRFASAMPKAPIPFRKKEKQEKDKDDMVPDRYATLQDDPSPRLSAQAQAAEDILDKYRNAIKRSSPSEGAIVNYDSAEALGDGESMHDSPRDEALQNMSADDLPDSASQVAQPQSSAFSYRDAKKKLRLALCSADSVAFPMLTHSTRNGLPDHTDPEDNEIVCFLKVQLAEAINLQDKNLMAQLQETMRCVSRFDNRTCRKLLASIAEDYRKRAPYIAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIREFIQDFQKLTAADDKTAQVEDFLQFLYGAMAQDAIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHKALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYANCLSGEESYWWMQFTAAVEFIKTIDDRK
SIO_010081: GAPVD1
subclass of: SO_0000673
so part of: GAPVD1
location: complement(join(861183..861323,862012..862209,863236..863308,863870..864083,865418..865605,866055..866214,866798..866907,867301..867430,867914..868036,868686..868766,869146..869233,869744..870117,870247..870324,870778..870897,871437..871571,872171..872311,872586..872759,873570..873695,874405..874531,875311..875471,876288..876368,877313..877502,877610..877744,878943..879029,880219..881062,881423..881637,886922..886970,887481..887527))
location: region:861183-887527:-1
so has part: feature:887481-887527:-1:exon
so has part: feature:886922-886970:-1:exon
so has part: feature:881423-881637:-1:exon
so has part: feature:880219-881062:-1:exon
so has part: feature:878943-879029:-1:exon
so has part: feature:877610-877744:-1:exon
so has part: feature:877313-877502:-1:exon
so has part: feature:876288-876368:-1:exon
so has part: feature:875311-875471:-1:exon
so has part: feature:874405-874531:-1:exon
so has part: feature:873570-873695:-1:exon
so has part: feature:872586-872759:-1:exon
so has part: feature:872171-872311:-1:exon
so has part: feature:871437-871571:-1:exon
so has part: feature:870778-870897:-1:exon
so has part: feature:870247-870324:-1:exon
so has part: feature:869744-870117:-1:exon
so has part: feature:869146-869233:-1:exon
so has part: feature:868686-868766:-1:exon
so has part: feature:867914-868036:-1:exon
so has part: feature:867301-867430:-1:exon
so has part: feature:866798-866907:-1:exon
so has part: feature:866055-866214:-1:exon
so has part: feature:865418-865605:-1:exon
so has part: feature:863870-864083:-1:exon
so has part: feature:863236-863308:-1:exon
so has part: feature:862012-862209:-1:exon
so has part: feature:861183-861323:-1:exon

XP_032564127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:887481-887527:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:886922-886970:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:881423-881637:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:880219-881062:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:878943-879029:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:877610-877744:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:877313-877502:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:876288-876368:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:875311-875471:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:874405-874531:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:873570-873695:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:872586-872759:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:872171-872311:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:871437-871571:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:870778-870897:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:870247-870324:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:869744-870117:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:869146-869233:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:868686-868766:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:867914-868036:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:867301-867430:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:866798-866907:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:866055-866214:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:865418-865605:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:863870-864083:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:863236-863308:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:862012-862209:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:861183-861323:-1:exon

GAPVD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: GAPVD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTPase-activating protein and VPS9 domain-containing protein 1 isoform X8
translation: MVKLDIHTLAHHLKQERLYVTAEKQLIQRLNADVLKTAEKLYRTAWISKQQRINLDRLIITSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLNRLRENPRLIASCLVAGEKLNQDNTQSVIHTVFTSIYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSILFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDANKLIERFSPVQQEKLFGEKGTEKFKQRVQEMVDSNEAKLVTLVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVGEVRAMCTDLLLACFICPAIVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGDPRTKSSLAKFDKSCVAAFLDVVIDGRAVETPPMSAVNLLEGLSRTVVYMTYSQLTTLVGFMRNVMSSDQLKEDRMALENLLANLPQNKPGKSSSLEMTPYNTPQLSPATTPANKKNRLPIATRSRSRSNILMDQHGDHEGSSQETIPEVQPEEVLVISLGTGPQITPGMMSENEVLNMQLADGGQDVPIDENKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNMDEDRLQEIAGAAAENMLGSLLCLPGSGSVLLDPCTGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDMDETAHGASQLTSPPSQTDSLLALFDPLSSNEGVSAVVRPKVHYARPSHPPPDPPILEGAVGGNEARLPNFGSHSLIPTDLEAFKQRHSYPERLVRSRSSDIVSSVRRPMSDPGWNRRPGNEDRELPMATSSAGAAVLAATSQSSSSSPSKDSSRGEIEERKDSDDEKSDRNKPWWRKRFASAMPKAPIPFRKKEKQEKDKDDMVPDRYATLQDDPSPRLSAQAQAAEDILDKYRNAIKRSSPSEGAIVNYDSAEALGDGESMHDSPRDEALQNMSADDLPDSASQVAQPQSSAFSYRDAKKKLRLALCSADSVAFPMLTHSTRNGLPDHTDPEDNEIVCFLKVQLAEAINLQDKNLMAQLQETMRCVSRFDNRTCRKLLASIAEDYRKRAPYIAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIREFIQDFQKLTAADDKTAQVEDFLQFLYGAMAQDAIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHKALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYANCLSGEESYWWMQFTAAVEFIKTIDDRK
SIO_010081: GAPVD1
subclass of: SO_0000673
so part of: GAPVD1
location: complement(join(861183..861323,862012..862209,863236..863308,863870..864083,865418..865605,866055..866214,866798..866907,867301..867430,867914..868036,868686..868766,869146..869233,869744..870117,870247..870324,870778..870897,871437..871571,872171..872311,872586..872759,873570..873695,874405..874531,875311..875471,877313..877502,877610..877744,878943..879029,880219..881062,881423..881607))
location: region:861183-881607:-1
so has part: feature:881423-881607:-1:exon
so has part: feature:880219-881062:-1:exon
so has part: feature:878943-879029:-1:exon
so has part: feature:877610-877744:-1:exon
so has part: feature:877313-877502:-1:exon
so has part: feature:875311-875471:-1:exon
so has part: feature:874405-874531:-1:exon
so has part: feature:873570-873695:-1:exon
so has part: feature:872586-872759:-1:exon
so has part: feature:872171-872311:-1:exon
so has part: feature:871437-871571:-1:exon
so has part: feature:870778-870897:-1:exon
so has part: feature:870247-870324:-1:exon
so has part: feature:869744-870117:-1:exon
so has part: feature:869146-869233:-1:exon
so has part: feature:868686-868766:-1:exon
so has part: feature:867914-868036:-1:exon
so has part: feature:867301-867430:-1:exon
so has part: feature:866798-866907:-1:exon
so has part: feature:866055-866214:-1:exon
so has part: feature:865418-865605:-1:exon
so has part: feature:863870-864083:-1:exon
so has part: feature:863236-863308:-1:exon
so has part: feature:862012-862209:-1:exon
so has part: feature:861183-861323:-1:exon

XP_032564134.1
type: Protein
SIO_000068: ncbiprotein

position:881607:-1
position: 881607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:881423-881607:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:880219-881062:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:878943-879029:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:877610-877744:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:877313-877502:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:875311-875471:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:874405-874531:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:873570-873695:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:872586-872759:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:872171-872311:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:871437-871571:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:870778-870897:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:870247-870324:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:869744-870117:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:869146-869233:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:868686-868766:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:867914-868036:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:867301-867430:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:866798-866907:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:866055-866214:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:865418-865605:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:863870-864083:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:863236-863308:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:862012-862209:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:861183-861323:-1:exon

GAPVD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: GAPVD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTPase-activating protein and VPS9 domain-containing protein 1 isoform X5
translation: MVKLDIHTLAHHLKQERLYVTAEKQLIQRLNADVLKTAEKLYRTAWISKQQRINLDRLIITSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLNRLRENPRLIASCLVAGEKLNQDNTQSVIHTVFTSIYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSILFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDANKLIERFSPVQQEKLFGEKGTEKFKQRVQEMVDSNEAKLVTLVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVGEVRAMCTDLLLACFICPAIVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGDPRTKSSLAKFDKSCVAAFLDVVIDGRAVETPPMSAVNLLEGLSRTVVYMTYSQLTTLVGFMRNVMSSDQLKEDRMALENLLANLPQNKPGKSSSLEMTPYNTPQLSPATTPANKKNRLPIGQQLAAITAWDTSATNLSAHITLVTPFATRSRSRSNILMDQHGDHEGSSQETIPEVQPEEVLVISLGTGPQITPGMMSENEVLNMQLADGGQDVPIDENKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNMDEDRLQEIAGAAAENMLGSLLCLPGSGSVLLDPCTGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDMDETAHGASQLTSPPSQTDSLLALFDPLSSNEGVSAVVRPKVHYARPSHPPPDPPILEGAVGGNEARLPNFGSHSLIPTDLEAFKQRHSYPERLVRSRSSDIVSSVRRPMSDPGWNRRPGNEDRELPMATSSAGAAVLAATSQSSSSSPSKDSSRGEIEERKDSDDEKSDRNKPWWRKRFASAMPKAPIPFRKKEKQEKDKDDMVPDRYATLQDDPSPRLSAQAQAAEDILDKYRNAIKRSSPSEGAIVNYDSAEALGDGESMHDSPRDEALQNMSADDLPDSASQVAQPQSSAFSYRDAKKKLRLALCSADSVAFPMLTHSTRNGLPDHTDPEDNEIVCFLKVQLAEAINLQDKNLMAQLQETMRCVSRFDNRTCRKLLASIAEDYRKRAPYIAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIREFIQDFQKLTAADDKTAQVEDFLQFLYGAMAQDAIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHKALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYANCLSGEESYWWMQFTAAVEFIKTIDDRK
SIO_010081: GAPVD1
subclass of: SO_0000673
so part of: GAPVD1
location: complement(join(861183..861323,862012..862209,863236..863308,863870..864083,865418..865605,866055..866214,866798..866907,867301..867430,867914..868036,868686..868766,869146..869233,869744..870117,870247..870324,870778..870897,871437..871571,872171..872311,872586..872759,873570..873695,874405..874531,875311..875471,876288..876368,877313..877502,877610..877744,878943..879029,880219..881062,881423..881607))
location: region:861183-881607:-1
so has part: feature:881423-881607:-1:exon
so has part: feature:880219-881062:-1:exon
so has part: feature:878943-879029:-1:exon
so has part: feature:877610-877744:-1:exon
so has part: feature:877313-877502:-1:exon
so has part: feature:876288-876368:-1:exon
so has part: feature:875311-875471:-1:exon
so has part: feature:874405-874531:-1:exon
so has part: feature:873570-873695:-1:exon
so has part: feature:872586-872759:-1:exon
so has part: feature:872171-872311:-1:exon
so has part: feature:871437-871571:-1:exon
so has part: feature:870778-870897:-1:exon
so has part: feature:870247-870324:-1:exon
so has part: feature:869744-870117:-1:exon
so has part: feature:869146-869233:-1:exon
so has part: feature:868686-868766:-1:exon
so has part: feature:867914-868036:-1:exon
so has part: feature:867301-867430:-1:exon
so has part: feature:866798-866907:-1:exon
so has part: feature:866055-866214:-1:exon
so has part: feature:865418-865605:-1:exon
so has part: feature:863870-864083:-1:exon
so has part: feature:863236-863308:-1:exon
so has part: feature:862012-862209:-1:exon
so has part: feature:861183-861323:-1:exon

XP_032564131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:881423-881607:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:880219-881062:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:878943-879029:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:877610-877744:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:877313-877502:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:876288-876368:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:875311-875471:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:874405-874531:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:873570-873695:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:872586-872759:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:872171-872311:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:871437-871571:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:870778-870897:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:870247-870324:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:869744-870117:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:869146-869233:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:868686-868766:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:867914-868036:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:867301-867430:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:866798-866907:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:866055-866214:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:865418-865605:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:863870-864083:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:863236-863308:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:862012-862209:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:861183-861323:-1:exon

HSPA5
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: HSPA5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 887730..891717
location: region:887730-891717:1
so has part: feature:887730-891717:1:exon
subclass of: SO_0000010

116797068
type: Gene
SIO_000068: ncbigene

position:887730:1
position: 887730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:891717:1
position: 891717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:887730-891717:1:exon

HSPA5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: HSPA5
product: heat shock protein family A (Hsp70) member 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 113 ESTs, 33 long SRA reads, 65 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032708250.1
SIO_010081: HSPA5
subclass of: SO_0000673
so part of: HSPA5
location: join(887730..887865,888029..888166,888321..888552,888813..888950,889210..889322,889401..889791,890080..890317,890516..890683,890846..891717)
location: region:887730-891717:1
so has part: feature:887730-887865:1:exon
so has part: feature:888029-888166:1:exon
so has part: feature:888321-888552:1:exon
so has part: feature:888813-888950:1:exon
so has part: feature:889210-889322:1:exon
so has part: feature:889401-889791:1:exon
so has part: feature:890080-890317:1:exon
so has part: feature:890516-890683:1:exon
so has part: feature:890846-891717:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:887730-887865:1:exon

position:887865:1
position: 887865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:888029-888166:1:exon

position:888029:1
position: 888029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:888166:1
position: 888166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:888321-888552:1:exon

position:888321:1
position: 888321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:888552:1
position: 888552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:888813-888950:1:exon

position:888813:1
position: 888813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:888950:1
position: 888950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:889210-889322:1:exon

position:889210:1
position: 889210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:889322:1
position: 889322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:889401-889791:1:exon

position:889401:1
position: 889401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:889791:1
position: 889791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:890080-890317:1:exon

position:890080:1
position: 890080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890317:1
position: 890317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:890516-890683:1:exon

position:890516:1
position: 890516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890683:1
position: 890683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:890846-891717:1:exon

position:890846:1
position: 890846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HSPA5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: HSPA5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum chaperone BiP
translation: MRLLLLVLLALGAARADEEEKKEDVGTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKYLPFKVVEKKAKPHIQVDVGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKREGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFFEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGDQDTGDLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKGTGNKNKITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDARNELESYAYSLKNQIGDKEKLGGKLSSEDKETIEKAVEEKIEWLESHQDGDIEDFKAQKKELEEVVQPIVSKLYGSAGPPPGEEEAAEKDEL
SIO_010081: HSPA5
subclass of: SO_0000673
so part of: HSPA5
location: join(888051..888166,888321..888552,888813..888950,889210..889322,889401..889791,890080..890317,890516..890683,890846..891405)
location: region:888051-891405:1
so has part: feature:888051-888166:1:exon
so has part: feature:888321-888552:1:exon
so has part: feature:888813-888950:1:exon
so has part: feature:889210-889322:1:exon
so has part: feature:889401-889791:1:exon
so has part: feature:890080-890317:1:exon
so has part: feature:890516-890683:1:exon
so has part: feature:890846-891405:1:exon

XP_032564141.1
type: Protein
SIO_000068: ncbiprotein

position:888051:1
position: 888051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:891405:1
position: 891405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:888051-888166:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:888321-888552:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:888813-888950:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:889210-889322:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:889401-889791:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:890080-890317:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:890516-890683:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:890846-891405:1:exon

RABEPK
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: RABEPK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(892172..894494)
location: region:892172-894494:-1
so has part: feature:892172-894494:-1:exon
subclass of: SO_0000010

116797271
type: Gene
SIO_000068: ncbigene

position:892172:-1
position: 892172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:894494:-1
position: 894494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:892172-894494:-1:exon

RABEPK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: RABEPK
product: Rab9 effector protein with kelch motifs
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032708658.1
SIO_010081: RABEPK
subclass of: SO_0000673
so part of: RABEPK
location: complement(join(892172..892836,893008..893157,893320..893469,893667..893828,893910..894062,894143..894297,894436..894494))
location: region:892172-894494:-1
so has part: feature:894436-894494:-1:exon
so has part: feature:894143-894297:-1:exon
so has part: feature:893910-894062:-1:exon
so has part: feature:893667-893828:-1:exon
so has part: feature:893320-893469:-1:exon
so has part: feature:893008-893157:-1:exon
so has part: feature:892172-892836:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:894436-894494:-1:exon

position:894436:-1
position: 894436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:894143-894297:-1:exon

position:894143:-1
position: 894143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:894297:-1
position: 894297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:893910-894062:-1:exon

position:893910:-1
position: 893910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:894062:-1
position: 894062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:893667-893828:-1:exon

position:893667:-1
position: 893667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893828:-1
position: 893828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:893320-893469:-1:exon

position:893320:-1
position: 893320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893469:-1
position: 893469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:893008-893157:-1:exon

position:893008:-1
position: 893008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893157:-1
position: 893157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:892172-892836:-1:exon

position:892836:-1
position: 892836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RABEPK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: RABEPK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab9 effector protein with kelch motifs
translation: MAPRALLELLPGGRPQAGRWPPSPRRYRLSPRGERPRARVGLGCLALPGRVLLLGGADPAGAFADAHFVELAPLRWVPAGWRGLRPRYEHATFLPGPGTPRLWVFGGAHPAGNRGCVQVLDPETGTWESPAVKGSPPQPRTFHTSSAAIGTRLFVFGGGHRGAEPVRDQRLHVFDTATLTWSQPDTCGDPPSPRHGHAVVAVGTKLFIHGGLAGDVFYNDLFCIDTSDMRWVKVPATGDVPGGRASHSSAAFREHVYIFGGIGPEGTLVTTYKYHTGRQQWTLLQFESPMPAGRLDHAMCVIPWQAGTQGDRGATTAGTEPPVPAGDSAGPLQQGQGSTEDTVVHLLLVFGGMDTQGQLHGDCLVTLLE
SIO_010081: RABEPK
subclass of: SO_0000673
so part of: RABEPK
location: complement(join(892556..892836,893008..893157,893320..893469,893667..893828,893910..894062,894143..894297,894436..894494))
location: region:892556-894494:-1
so has part: feature:894436-894494:-1:exon
so has part: feature:894143-894297:-1:exon
so has part: feature:893910-894062:-1:exon
so has part: feature:893667-893828:-1:exon
so has part: feature:893320-893469:-1:exon
so has part: feature:893008-893157:-1:exon
so has part: feature:892556-892836:-1:exon

XP_032564549.1
type: Protein
SIO_000068: ncbiprotein

position:892556:-1
position: 892556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:894436-894494:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:894143-894297:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:893910-894062:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:893667-893828:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:893320-893469:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:893008-893157:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:892556-892836:-1:exon

PPP6C
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: PPP6C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 894549..897591
location: region:894549-897591:1
so has part: feature:894549-897591:1:exon
subclass of: SO_0000010

116797069
type: Gene
SIO_000068: ncbigene

position:894549:1
position: 894549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:897591:1
position: 897591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:894549-897591:1:exon

PPP6C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PPP6C
product: protein phosphatase 6 catalytic subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 20 ESTs, 6 long SRA reads, 42 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_032708251.1
SIO_010081: PPP6C
subclass of: SO_0000673
so part of: PPP6C
location: join(894549..894685,894798..894893,894970..895035,895292..895433,895804..895883,896007..896216,896817..897591)
location: region:894549-897591:1
so has part: feature:894549-894685:1:exon
so has part: feature:894798-894893:1:exon
so has part: feature:894970-895035:1:exon
so has part: feature:895292-895433:1:exon
so has part: feature:895804-895883:1:exon
so has part: feature:896007-896216:1:exon
so has part: feature:896817-897591:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:894549-894685:1:exon

position:894685:1
position: 894685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:894798-894893:1:exon

position:894798:1
position: 894798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:894893:1
position: 894893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:894970-895035:1:exon

position:894970:1
position: 894970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895035:1
position: 895035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:895292-895433:1:exon

position:895292:1
position: 895292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895433:1
position: 895433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:895804-895883:1:exon

position:895804:1
position: 895804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895883:1
position: 895883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:896007-896216:1:exon

position:896007:1
position: 896007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:896216:1
position: 896216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:896817-897591:1:exon

position:896817:1
position: 896817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPP6C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PPP6C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 6 catalytic subunit
translation: MAPLDLDKYVEIARLCKYLPENDLKRLCDYVCDLLLEESNVQPVSTPVTVCGDIHGQFYDLCELFRTGGQVPDTNYIFMGDFVDRGYYSLETFTYLLALKAKWPDRITLLRGNHESRQITQVYGFYDECQTKYGNANAWRYCTKVFDMLTIAALIDEQILCVHGGLSPDIKTLDQIRTIERNQEIPHKGAFCDLVWSDPEDVDTWAISPRGAGWLFGAKVTNEFVHINNLKLICRAHQLVHEGYKFMFDEKLVTVWSAPNYCYRCGNIASIMVFKDVNTREPKLFRAVPDSERVIPPRTTTPYFL
SIO_010081: PPP6C
subclass of: SO_0000673
so part of: PPP6C
location: join(894611..894685,894798..894893,894970..895035,895292..895433,895804..895883,896007..896216,896817..897065)
location: region:894611-897065:1
so has part: feature:894611-894685:1:exon
so has part: feature:894798-894893:1:exon
so has part: feature:894970-895035:1:exon
so has part: feature:895292-895433:1:exon
so has part: feature:895804-895883:1:exon
so has part: feature:896007-896216:1:exon
so has part: feature:896817-897065:1:exon

XP_032564142.1
type: Protein
SIO_000068: ncbiprotein

position:894611:1
position: 894611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:897065:1
position: 897065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:894611-894685:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:894798-894893:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:894970-895035:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:895292-895433:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:895804-895883:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:896007-896216:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:896817-897065:1:exon

ARPC5L
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: ARPC5L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 897714..900879
location: region:897714-900879:1
so has part: feature:897714-900879:1:exon
subclass of: SO_0000010

116797071
type: Gene
SIO_000068: ncbigene

position:897714:1
position: 897714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:900879:1
position: 900879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:897714-900879:1:exon

ARPC5L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ARPC5L
product: actin related protein 2/3 complex subunit 5 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 1 long SRA read, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_032708252.1
SIO_010081: ARPC5L
subclass of: SO_0000673
so part of: ARPC5L
location: join(897714..897914,898094..898166,898451..898627,900323..900879)
location: region:897714-900879:1
so has part: feature:897714-897914:1:exon
so has part: feature:898094-898166:1:exon
so has part: feature:898451-898627:1:exon
so has part: feature:900323-900879:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:897714-897914:1:exon

position:897914:1
position: 897914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:898094-898166:1:exon

position:898094:1
position: 898094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:898166:1
position: 898166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:898451-898627:1:exon

position:898451:1
position: 898451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:898627:1
position: 898627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:900323-900879:1:exon

position:900323:1
position: 900323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARPC5L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ARPC5L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-related protein 2/3 complex subunit 5-like protein
translation: MLFLFLCPDPVRPRCPSRAGMARSTLSSRFRRLDIDQYDENRFVEEPEEAAAAEPDASPEVEALLRQGEALRAFHTAIRSSPGNTRNQAMKEQAQGTMLKVLTSFKSSEIEQAVNSLDRNGVDLLMKYIYKGFEKPTENSSAILLQWHEKALAVGGLGSIVRVLTARKTV
SIO_010081: ARPC5L
subclass of: SO_0000673
so part of: ARPC5L
location: join(897715..897914,898094..898166,898451..898627,900323..900385)
location: region:897715-900385:1
so has part: feature:897715-897914:1:exon
so has part: feature:898094-898166:1:exon
so has part: feature:898451-898627:1:exon
so has part: feature:900323-900385:1:exon

XP_032564143.1
type: Protein
SIO_000068: ncbiprotein

position:897715:1
position: 897715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:900385:1
position: 900385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:897715-897914:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:898094-898166:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:898451-898627:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:900323-900385:1:exon

GOLGA1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: GOLGA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(901579..920052)
location: region:901579-920052:-1
so has part: feature:901579-920052:-1:exon
subclass of: SO_0000010

116797067
type: Gene
SIO_000068: ncbigene

position:901579:-1
position: 901579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:920052:-1
position: 920052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:901579-920052:-1:exon

GOLGA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: GOLGA1
product: golgin A1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032708245.1
SIO_010081: GOLGA1
subclass of: SO_0000673
so part of: GOLGA1
location: complement(join(901579..904033,904826..904912,905816..905986,906510..906569,907059..907220,907670..907827,908661..908763,909379..909468,910180..910275,910493..910645,910894..910989,911436..911531,912674..912799,913025..913120,913243..913354,913764..913933,914201..914329,915061..915093,915570..915667,916157..916231,917562..917652,919300..919606,919958..920052))
location: region:901579-920052:-1
so has part: feature:919958-920052:-1:exon
so has part: feature:919300-919606:-1:exon
so has part: feature:917562-917652:-1:exon
so has part: feature:916157-916231:-1:exon
so has part: feature:915570-915667:-1:exon
so has part: feature:915061-915093:-1:exon
so has part: feature:914201-914329:-1:exon
so has part: feature:913764-913933:-1:exon
so has part: feature:913243-913354:-1:exon
so has part: feature:913025-913120:-1:exon
so has part: feature:912674-912799:-1:exon
so has part: feature:911436-911531:-1:exon
so has part: feature:910894-910989:-1:exon
so has part: feature:910493-910645:-1:exon
so has part: feature:910180-910275:-1:exon
so has part: feature:909379-909468:-1:exon
so has part: feature:908661-908763:-1:exon
so has part: feature:907670-907827:-1:exon
so has part: feature:907059-907220:-1:exon
so has part: feature:906510-906569:-1:exon
so has part: feature:905816-905986:-1:exon
so has part: feature:904826-904912:-1:exon
so has part: feature:901579-904033:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:919958-920052:-1:exon

position:919958:-1
position: 919958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:919300-919606:-1:exon

position:919300:-1
position: 919300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919606:-1
position: 919606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:917562-917652:-1:exon

position:917562:-1
position: 917562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:917652:-1
position: 917652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:916157-916231:-1:exon

position:916157:-1
position: 916157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:916231:-1
position: 916231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:915570-915667:-1:exon

position:915570:-1
position: 915570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:915667:-1
position: 915667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:915061-915093:-1:exon

position:915061:-1
position: 915061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:915093:-1
position: 915093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:914201-914329:-1:exon

position:914201:-1
position: 914201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:914329:-1
position: 914329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:913764-913933:-1:exon

position:913764:-1
position: 913764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:913933:-1
position: 913933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:913243-913354:-1:exon

position:913243:-1
position: 913243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:913354:-1
position: 913354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:913025-913120:-1:exon

position:913025:-1
position: 913025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:913120:-1
position: 913120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:912674-912799:-1:exon

position:912674:-1
position: 912674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:912799:-1
position: 912799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:911436-911531:-1:exon

position:911436:-1
position: 911436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:911531:-1
position: 911531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:910894-910989:-1:exon

position:910894:-1
position: 910894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:910989:-1
position: 910989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:910493-910645:-1:exon

position:910493:-1
position: 910493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:910645:-1
position: 910645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:910180-910275:-1:exon

position:910180:-1
position: 910180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:910275:-1
position: 910275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:909379-909468:-1:exon

position:909379:-1
position: 909379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:909468:-1
position: 909468
reference: sequence
type: ReverseStrandPosition
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GOLGA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: GOLGA1
product: golgin A1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032708246.1
SIO_010081: GOLGA1
subclass of: SO_0000673
so part of: GOLGA1
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location: region:901579-919962:-1
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SIO_000300: 23
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GOLGA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: GOLGA1
product: golgin A1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032708248.1
SIO_010081: GOLGA1
subclass of: SO_0000673
so part of: GOLGA1
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location: region:901579-919700:-1
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urn:…
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position:907709:-1
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GOLGA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: GOLGA1
product: golgin A1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032708247.1
SIO_010081: GOLGA1
subclass of: SO_0000673
so part of: GOLGA1
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location: region:901579-919700:-1
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urn:…
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urn:…
SIO_000300: 23
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position:903855:-1
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GOLGA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: GOLGA1
product: golgin A1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032708244.1
SIO_010081: GOLGA1
subclass of: SO_0000673
so part of: GOLGA1
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location: region:901579-919700:-1
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urn:…
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GOLGA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: GOLGA1
product: golgin A1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032708249.1
SIO_010081: GOLGA1
subclass of: SO_0000673
so part of: GOLGA1
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location: region:901579-915643:-1
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position:915643:-1
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urn:…
SIO_000300: 1
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position:915060:-1
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urn:…
SIO_000300: 3
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position:914327:-1
position: 914327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:913764-913933:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:913243-913354:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:913025-913120:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:912674-912799:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:911436-911531:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:910894-910989:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:910493-910645:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:910180-910275:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:909379-909468:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:908661-908763:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:907670-907827:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:907059-907220:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:906510-906569:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:905816-905986:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:904826-904912:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:901579-904033:-1:exon

GOLGA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: GOLGA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 1 isoform X2
translation: MFAKLKKKIAEEAAVAPRPGGTARIPRSVSKESITSVGADSGDDFASDGSSSREDLSSQLFRRNEQIRKLEVKLSDYADQIRNLQKIKEKLENALEKHQDSSMRKFQEQNEAHQASRAKMAEGMALALEQKDKEWMEKLGQVEKEKKMLQIQLQEVREQSLNLFQKRDEIDELEGFQQQEIAKVKHMLLKKEESLGRAEQELEACARELTRAKAELQEARSEASSLRKDLQELQQQVLELEAQRDELMTAETNAENKITALELREQELQTVIQQLSVDLQNARVAGSGCEKRLEVLQAEHESLKVEYEQHKQKMTFEFAERNKFTEQLQEKVSSLEKKLERNLSGDEHVQELLKEKAALEQRLDETRQQVVTDRTHHTEALNRLETQNKELEQKLQIATEALKKSKEAAAEQDLKIQKLQTNLKHERSQLQQQISSEKHQYDQKVTGLESQITALEKAWELDKTATQHRISQLEKENGNLNRSREEYESSLKQQESELDRLKNELSSRETVSVEIAKALEETRRQREELQQEVSHLNALIKEKDQLIDEKCDLLLKQKEELNQLSQDHEAALLQVNQLQSDIETSQNQAVEKEETARKEIEELKLQVLELEESTRALNNEHFPSPENCVVEQNGEVAAADVIQLQKDNRELEQQVAEKNKMIKQLQQRMTELKKTLQKELKIRPDSEVPELREKANSEVPNASVTVTNNSDLNDSREINFEYLKHVVLKFMSCRESEAFHLIKAVSVLLNFSQEEENMLKETLEYKMSWFGSKPSPKGSIRPSISSPRTLWP
SIO_010081: GOLGA1
subclass of: SO_0000673
so part of: GOLGA1
location: complement(join(903953..904033,904826..904912,905816..905986,906510..906569,907059..907220,907709..907827,908661..908763,909379..909468,910180..910275,910493..910645,910894..910989,911436..911531,912674..912799,913025..913120,913243..913354,913764..913933,914201..914329,915061..915093,915570..915667,916157..916231,917562..917652,919300..919434))
location: region:903953-919434:-1
so has part: feature:919300-919434:-1:exon
so has part: feature:917562-917652:-1:exon
so has part: feature:916157-916231:-1:exon
so has part: feature:915570-915667:-1:exon
so has part: feature:915061-915093:-1:exon
so has part: feature:914201-914329:-1:exon
so has part: feature:913764-913933:-1:exon
so has part: feature:913243-913354:-1:exon
so has part: feature:913025-913120:-1:exon
so has part: feature:912674-912799:-1:exon
so has part: feature:911436-911531:-1:exon
so has part: feature:910894-910989:-1:exon
so has part: feature:910493-910645:-1:exon
so has part: feature:910180-910275:-1:exon
so has part: feature:909379-909468:-1:exon
so has part: feature:908661-908763:-1:exon
so has part: feature:907709-907827:-1:exon
so has part: feature:907059-907220:-1:exon
so has part: feature:906510-906569:-1:exon
so has part: feature:905816-905986:-1:exon
so has part: feature:904826-904912:-1:exon
so has part: feature:903953-904033:-1:exon

XP_032564139.1
type: Protein
SIO_000068: ncbiprotein

position:903953:-1
position: 903953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919434:-1
position: 919434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:919300-919434:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:917562-917652:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:916157-916231:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:915570-915667:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:915061-915093:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:914201-914329:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:913764-913933:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:913243-913354:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:913025-913120:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:912674-912799:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:911436-911531:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:910894-910989:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:910493-910645:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:910180-910275:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:909379-909468:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:908661-908763:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:907709-907827:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:907059-907220:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:906510-906569:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:905816-905986:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:904826-904912:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:903953-904033:-1:exon

GOLGA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: GOLGA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 1 isoform X1
translation: MFAKLKKKIAEEAAVAPRPGGTARIPRSVSKESITSVGADSGDDFASDGSSSREDLSSQLFRRNEQIRKLEVKLSDYADQIRNLQKIKEKLENALEKHQDSSMRKFQEQNEAHQASRAKMAEGMALALEQKDKEWMEKLGQVEKEKKMLQIQLQEVREQSLNLFQKRDEIDELEGFQQQEIAKVKHMLLKKEESLGRAEQELEACARELTRAKAELQEARSEASSLRKDLQELQQQVLELEAQRDELMTAETNAENKITALELREQELQTVIQQLSVDLQNARVAGSGCEKRLEVLQAEHESLKVEYEQHKQKMTFEFAERNKFTEQLQEKVSSLEKKLERNLSGDEHVQELLKEKAALEQRLDETRQQVVTDRTHHTEALNRLETQNKELEQKLQIATEALKKSKEAAAEQDLKIQKLQTNLKHERSQLQQQISSEKHQYDQKVTGLESQITALEKAWELDKTATQHRISQLEKENGNLNRSREEYESSLKQQESELDRLKNELSSRETVSVEIAKALEETRRQREELQQEVSHLNALIKEKDQLIDEKCDLLLKQKEELNQLSQDHEAALLQVNQLQSDIETSQNQAVEKEETARKEIEELKLQVQECLLAREHEKDVLELEESTRALNNEHFPSPENCVVEQNGEVAAADVIQLQKDNRELEQQVAEKNKMIKQLQQRMTELKKTLQKELKIRPDSEVPELREKANSEVPNASVTVTNNSDLNDSREINFEYLKHVVLKFMSCRESEAFHLIKAVSVLLNFSQEEENMLKETLEYKMSWFGSKPSPKGSIRPSISSPRTLWP
SIO_010081: GOLGA1
subclass of: SO_0000673
so part of: GOLGA1
location: complement(join(903953..904033,904826..904912,905816..905986,906510..906569,907059..907220,907670..907827,908661..908763,909379..909468,910180..910275,910493..910645,910894..910989,911436..911531,912674..912799,913025..913120,913243..913354,913764..913933,914201..914329,915061..915093,915570..915667,916157..916231,917562..917652,919300..919434))
location: region:903953-919434:-1
so has part: feature:919300-919434:-1:exon
so has part: feature:917562-917652:-1:exon
so has part: feature:916157-916231:-1:exon
so has part: feature:915570-915667:-1:exon
so has part: feature:915061-915093:-1:exon
so has part: feature:914201-914329:-1:exon
so has part: feature:913764-913933:-1:exon
so has part: feature:913243-913354:-1:exon
so has part: feature:913025-913120:-1:exon
so has part: feature:912674-912799:-1:exon
so has part: feature:911436-911531:-1:exon
so has part: feature:910894-910989:-1:exon
so has part: feature:910493-910645:-1:exon
so has part: feature:910180-910275:-1:exon
so has part: feature:909379-909468:-1:exon
so has part: feature:908661-908763:-1:exon
so has part: feature:907670-907827:-1:exon
so has part: feature:907059-907220:-1:exon
so has part: feature:906510-906569:-1:exon
so has part: feature:905816-905986:-1:exon
so has part: feature:904826-904912:-1:exon
so has part: feature:903953-904033:-1:exon

XP_032564135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:919300-919434:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:917562-917652:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:916157-916231:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:915570-915667:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:915061-915093:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:914201-914329:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:913764-913933:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:913243-913354:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:913025-913120:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:912674-912799:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:911436-911531:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:910894-910989:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:910493-910645:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:910180-910275:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:909379-909468:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:908661-908763:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:907670-907827:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:907059-907220:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:906510-906569:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:905816-905986:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:904826-904912:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:903953-904033:-1:exon

GOLGA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: GOLGA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 1 isoform X1
translation: MFAKLKKKIAEEAAVAPRPGGTARIPRSVSKESITSVGADSGDDFASDGSSSREDLSSQLFRRNEQIRKLEVKLSDYADQIRNLQKIKEKLENALEKHQDSSMRKFQEQNEAHQASRAKMAEGMALALEQKDKEWMEKLGQVEKEKKMLQIQLQEVREQSLNLFQKRDEIDELEGFQQQEIAKVKHMLLKKEESLGRAEQELEACARELTRAKAELQEARSEASSLRKDLQELQQQVLELEAQRDELMTAETNAENKITALELREQELQTVIQQLSVDLQNARVAGSGCEKRLEVLQAEHESLKVEYEQHKQKMTFEFAERNKFTEQLQEKVSSLEKKLERNLSGDEHVQELLKEKAALEQRLDETRQQVVTDRTHHTEALNRLETQNKELEQKLQIATEALKKSKEAAAEQDLKIQKLQTNLKHERSQLQQQISSEKHQYDQKVTGLESQITALEKAWELDKTATQHRISQLEKENGNLNRSREEYESSLKQQESELDRLKNELSSRETVSVEIAKALEETRRQREELQQEVSHLNALIKEKDQLIDEKCDLLLKQKEELNQLSQDHEAALLQVNQLQSDIETSQNQAVEKEETARKEIEELKLQVQECLLAREHEKDVLELEESTRALNNEHFPSPENCVVEQNGEVAAADVIQLQKDNRELEQQVAEKNKMIKQLQQRMTELKKTLQKELKIRPDSEVPELREKANSEVPNASVTVTNNSDLNDSREINFEYLKHVVLKFMSCRESEAFHLIKAVSVLLNFSQEEENMLKETLEYKMSWFGSKPSPKGSIRPSISSPRTLWP
SIO_010081: GOLGA1
subclass of: SO_0000673
so part of: GOLGA1
location: complement(join(903953..904033,904826..904912,905816..905986,906510..906569,907059..907220,907670..907827,908661..908763,909379..909468,910180..910275,910493..910645,910894..910989,911436..911531,912674..912799,913025..913120,913243..913354,913764..913933,914201..914329,915061..915093,915570..915667,916157..916231,917562..917652,919300..919434))
location: region:903953-919434:-1
so has part: feature:919300-919434:-1:exon
so has part: feature:917562-917652:-1:exon
so has part: feature:916157-916231:-1:exon
so has part: feature:915570-915667:-1:exon
so has part: feature:915061-915093:-1:exon
so has part: feature:914201-914329:-1:exon
so has part: feature:913764-913933:-1:exon
so has part: feature:913243-913354:-1:exon
so has part: feature:913025-913120:-1:exon
so has part: feature:912674-912799:-1:exon
so has part: feature:911436-911531:-1:exon
so has part: feature:910894-910989:-1:exon
so has part: feature:910493-910645:-1:exon
so has part: feature:910180-910275:-1:exon
so has part: feature:909379-909468:-1:exon
so has part: feature:908661-908763:-1:exon
so has part: feature:907670-907827:-1:exon
so has part: feature:907059-907220:-1:exon
so has part: feature:906510-906569:-1:exon
so has part: feature:905816-905986:-1:exon
so has part: feature:904826-904912:-1:exon
so has part: feature:903953-904033:-1:exon

XP_032564136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:919300-919434:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:917562-917652:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:916157-916231:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:915570-915667:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:915061-915093:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:914201-914329:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:913764-913933:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:913243-913354:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:913025-913120:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:912674-912799:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:911436-911531:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:910894-910989:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:910493-910645:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:910180-910275:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:909379-909468:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:908661-908763:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:907670-907827:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:907059-907220:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:906510-906569:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:905816-905986:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:904826-904912:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:903953-904033:-1:exon

GOLGA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: GOLGA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 1 isoform X1
translation: MFAKLKKKIAEEAAVAPRPGGTARIPRSVSKESITSVGADSGDDFASDGSSSREDLSSQLFRRNEQIRKLEVKLSDYADQIRNLQKIKEKLENALEKHQDSSMRKFQEQNEAHQASRAKMAEGMALALEQKDKEWMEKLGQVEKEKKMLQIQLQEVREQSLNLFQKRDEIDELEGFQQQEIAKVKHMLLKKEESLGRAEQELEACARELTRAKAELQEARSEASSLRKDLQELQQQVLELEAQRDELMTAETNAENKITALELREQELQTVIQQLSVDLQNARVAGSGCEKRLEVLQAEHESLKVEYEQHKQKMTFEFAERNKFTEQLQEKVSSLEKKLERNLSGDEHVQELLKEKAALEQRLDETRQQVVTDRTHHTEALNRLETQNKELEQKLQIATEALKKSKEAAAEQDLKIQKLQTNLKHERSQLQQQISSEKHQYDQKVTGLESQITALEKAWELDKTATQHRISQLEKENGNLNRSREEYESSLKQQESELDRLKNELSSRETVSVEIAKALEETRRQREELQQEVSHLNALIKEKDQLIDEKCDLLLKQKEELNQLSQDHEAALLQVNQLQSDIETSQNQAVEKEETARKEIEELKLQVQECLLAREHEKDVLELEESTRALNNEHFPSPENCVVEQNGEVAAADVIQLQKDNRELEQQVAEKNKMIKQLQQRMTELKKTLQKELKIRPDSEVPELREKANSEVPNASVTVTNNSDLNDSREINFEYLKHVVLKFMSCRESEAFHLIKAVSVLLNFSQEEENMLKETLEYKMSWFGSKPSPKGSIRPSISSPRTLWP
SIO_010081: GOLGA1
subclass of: SO_0000673
so part of: GOLGA1
location: complement(join(903953..904033,904826..904912,905816..905986,906510..906569,907059..907220,907670..907827,908661..908763,909379..909468,910180..910275,910493..910645,910894..910989,911436..911531,912674..912799,913025..913120,913243..913354,913764..913933,914201..914329,915061..915093,915570..915667,916157..916231,917562..917652,919300..919434))
location: region:903953-919434:-1
so has part: feature:919300-919434:-1:exon
so has part: feature:917562-917652:-1:exon
so has part: feature:916157-916231:-1:exon
so has part: feature:915570-915667:-1:exon
so has part: feature:915061-915093:-1:exon
so has part: feature:914201-914329:-1:exon
so has part: feature:913764-913933:-1:exon
so has part: feature:913243-913354:-1:exon
so has part: feature:913025-913120:-1:exon
so has part: feature:912674-912799:-1:exon
so has part: feature:911436-911531:-1:exon
so has part: feature:910894-910989:-1:exon
so has part: feature:910493-910645:-1:exon
so has part: feature:910180-910275:-1:exon
so has part: feature:909379-909468:-1:exon
so has part: feature:908661-908763:-1:exon
so has part: feature:907670-907827:-1:exon
so has part: feature:907059-907220:-1:exon
so has part: feature:906510-906569:-1:exon
so has part: feature:905816-905986:-1:exon
so has part: feature:904826-904912:-1:exon
so has part: feature:903953-904033:-1:exon

XP_032564137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:919300-919434:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:917562-917652:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:916157-916231:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:915570-915667:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:915061-915093:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:914201-914329:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:913764-913933:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:913243-913354:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:913025-913120:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:912674-912799:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:911436-911531:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:910894-910989:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:910493-910645:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:910180-910275:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:909379-909468:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:908661-908763:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:907670-907827:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:907059-907220:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:906510-906569:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:905816-905986:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:904826-904912:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:903953-904033:-1:exon

GOLGA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: GOLGA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 1 isoform X1
translation: MFAKLKKKIAEEAAVAPRPGGTARIPRSVSKESITSVGADSGDDFASDGSSSREDLSSQLFRRNEQIRKLEVKLSDYADQIRNLQKIKEKLENALEKHQDSSMRKFQEQNEAHQASRAKMAEGMALALEQKDKEWMEKLGQVEKEKKMLQIQLQEVREQSLNLFQKRDEIDELEGFQQQEIAKVKHMLLKKEESLGRAEQELEACARELTRAKAELQEARSEASSLRKDLQELQQQVLELEAQRDELMTAETNAENKITALELREQELQTVIQQLSVDLQNARVAGSGCEKRLEVLQAEHESLKVEYEQHKQKMTFEFAERNKFTEQLQEKVSSLEKKLERNLSGDEHVQELLKEKAALEQRLDETRQQVVTDRTHHTEALNRLETQNKELEQKLQIATEALKKSKEAAAEQDLKIQKLQTNLKHERSQLQQQISSEKHQYDQKVTGLESQITALEKAWELDKTATQHRISQLEKENGNLNRSREEYESSLKQQESELDRLKNELSSRETVSVEIAKALEETRRQREELQQEVSHLNALIKEKDQLIDEKCDLLLKQKEELNQLSQDHEAALLQVNQLQSDIETSQNQAVEKEETARKEIEELKLQVQECLLAREHEKDVLELEESTRALNNEHFPSPENCVVEQNGEVAAADVIQLQKDNRELEQQVAEKNKMIKQLQQRMTELKKTLQKELKIRPDSEVPELREKANSEVPNASVTVTNNSDLNDSREINFEYLKHVVLKFMSCRESEAFHLIKAVSVLLNFSQEEENMLKETLEYKMSWFGSKPSPKGSIRPSISSPRTLWP
SIO_010081: GOLGA1
subclass of: SO_0000673
so part of: GOLGA1
location: complement(join(903953..904033,904826..904912,905816..905986,906510..906569,907059..907220,907670..907827,908661..908763,909379..909468,910180..910275,910493..910645,910894..910989,911436..911531,912674..912799,913025..913120,913243..913354,913764..913933,914201..914329,915061..915093,915570..915667,916157..916231,917562..917652,919300..919434))
location: region:903953-919434:-1
so has part: feature:919300-919434:-1:exon
so has part: feature:917562-917652:-1:exon
so has part: feature:916157-916231:-1:exon
so has part: feature:915570-915667:-1:exon
so has part: feature:915061-915093:-1:exon
so has part: feature:914201-914329:-1:exon
so has part: feature:913764-913933:-1:exon
so has part: feature:913243-913354:-1:exon
so has part: feature:913025-913120:-1:exon
so has part: feature:912674-912799:-1:exon
so has part: feature:911436-911531:-1:exon
so has part: feature:910894-910989:-1:exon
so has part: feature:910493-910645:-1:exon
so has part: feature:910180-910275:-1:exon
so has part: feature:909379-909468:-1:exon
so has part: feature:908661-908763:-1:exon
so has part: feature:907670-907827:-1:exon
so has part: feature:907059-907220:-1:exon
so has part: feature:906510-906569:-1:exon
so has part: feature:905816-905986:-1:exon
so has part: feature:904826-904912:-1:exon
so has part: feature:903953-904033:-1:exon

XP_032564138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:919300-919434:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:917562-917652:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:916157-916231:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:915570-915667:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:915061-915093:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:914201-914329:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:913764-913933:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:913243-913354:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:913025-913120:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:912674-912799:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:911436-911531:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:910894-910989:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:910493-910645:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:910180-910275:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:909379-909468:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:908661-908763:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:907670-907827:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:907059-907220:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:906510-906569:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:905816-905986:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:904826-904912:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:903953-904033:-1:exon

GOLGA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: GOLGA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 1 isoform X3
translation: MLQIQLQEVREQSLNLFQKRDEIDELEGFQQQEIAKVKHMLLKKEESLGRAEQELEACARELTRAKAELQEARSEASSLRKDLQELQQQVLELEAQRDELMTAETNAENKITALELREQELQTVIQQLSVDLQNARVAGSGCEKRLEVLQAEHESLKVEYEQHKQKMTFEFAERNKFTEQLQEKVSSLEKKLERNLSGDEHVQELLKEKAALEQRLDETRQQVVTDRTHHTEALNRLETQNKELEQKLQIATEALKKSKEAAAEQDLKIQKLQTNLKHERSQLQQQISSEKHQYDQKVTGLESQITALEKAWELDKTATQHRISQLEKENGNLNRSREEYESSLKQQESELDRLKNELSSRETVSVEIAKALEETRRQREELQQEVSHLNALIKEKDQLIDEKCDLLLKQKEELNQLSQDHEAALLQVNQLQSDIETSQNQAVEKEETARKEIEELKLQVQECLLAREHEKDVLELEESTRALNNEHFPSPENCVVEQNGEVAAADVIQLQKDNRELEQQVAEKNKMIKQLQQRMTELKKTLQKELKIRPDSEVPELREKANSEVPNASVTVTNNSDLNDSREINFEYLKHVVLKFMSCRESEAFHLIKAVSVLLNFSQEEENMLKETLEYKMSWFGSKPSPKGSIRPSISSPRTLWP
SIO_010081: GOLGA1
subclass of: SO_0000673
so part of: GOLGA1
location: complement(join(903953..904033,904826..904912,905816..905986,906510..906569,907059..907220,907670..907827,908661..908763,909379..909468,910180..910275,910493..910645,910894..910989,911436..911531,912674..912799,913025..913120,913243..913354,913764..913933,914201..914320))
location: region:903953-914320:-1
so has part: feature:914201-914320:-1:exon
so has part: feature:913764-913933:-1:exon
so has part: feature:913243-913354:-1:exon
so has part: feature:913025-913120:-1:exon
so has part: feature:912674-912799:-1:exon
so has part: feature:911436-911531:-1:exon
so has part: feature:910894-910989:-1:exon
so has part: feature:910493-910645:-1:exon
so has part: feature:910180-910275:-1:exon
so has part: feature:909379-909468:-1:exon
so has part: feature:908661-908763:-1:exon
so has part: feature:907670-907827:-1:exon
so has part: feature:907059-907220:-1:exon
so has part: feature:906510-906569:-1:exon
so has part: feature:905816-905986:-1:exon
so has part: feature:904826-904912:-1:exon
so has part: feature:903953-904033:-1:exon

XP_032564140.1
type: Protein
SIO_000068: ncbiprotein

position:914320:-1
position: 914320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:914201-914320:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:913764-913933:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:913243-913354:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:913025-913120:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:912674-912799:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:911436-911531:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:910894-910989:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:910493-910645:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:910180-910275:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:909379-909468:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:908661-908763:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:907670-907827:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:907059-907220:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:906510-906569:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:905816-905986:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:904826-904912:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:903953-904033:-1:exon

SCAI
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: SCAI
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(920304..958375)
location: region:920304-958375:-1
so has part: feature:920304-958375:-1:exon
subclass of: SO_0000010

116797008
type: Gene
SIO_000068: ncbigene

position:920304:-1
position: 920304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:958375:-1
position: 958375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:920304-958375:-1:exon

SCAI
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SCAI
product: suppressor of cancer cell invasion, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 6 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032708077.1
SIO_010081: SCAI
subclass of: SO_0000673
so part of: SCAI
location: complement(join(920304..924705,924736..926046,927141..927241,927330..927503,928052..928124,932819..932900,933342..933441,935487..935565,936613..936714,937275..937376,938206..938358,938988..939086,939842..939938,940311..940409,940959..941045,941657..941752,948586..948717,958320..958375))
location: region:920304-958375:-1
so has part: feature:958320-958375:-1:exon
so has part: feature:948586-948717:-1:exon
so has part: feature:941657-941752:-1:exon
so has part: feature:940959-941045:-1:exon
so has part: feature:940311-940409:-1:exon
so has part: feature:939842-939938:-1:exon
so has part: feature:938988-939086:-1:exon
so has part: feature:938206-938358:-1:exon
so has part: feature:937275-937376:-1:exon
so has part: feature:936613-936714:-1:exon
so has part: feature:935487-935565:-1:exon
so has part: feature:933342-933441:-1:exon
so has part: feature:932819-932900:-1:exon
so has part: feature:928052-928124:-1:exon
so has part: feature:927330-927503:-1:exon
so has part: feature:927141-927241:-1:exon
so has part: feature:924736-926046:-1:exon
so has part: feature:920304-924705:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:958320-958375:-1:exon

position:958320:-1
position: 958320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:948586-948717:-1:exon

position:948586:-1
position: 948586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:948717:-1
position: 948717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:941657-941752:-1:exon

position:941657:-1
position: 941657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:941752:-1
position: 941752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:940959-941045:-1:exon

position:940959:-1
position: 940959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:941045:-1
position: 941045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:940311-940409:-1:exon

position:940311:-1
position: 940311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940409:-1
position: 940409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:939842-939938:-1:exon

position:939842:-1
position: 939842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:939938:-1
position: 939938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:938988-939086:-1:exon

position:938988:-1
position: 938988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:939086:-1
position: 939086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:938206-938358:-1:exon

position:938206:-1
position: 938206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938358:-1
position: 938358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:937275-937376:-1:exon

position:937275:-1
position: 937275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:937376:-1
position: 937376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:936613-936714:-1:exon

position:936613:-1
position: 936613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:936714:-1
position: 936714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:935487-935565:-1:exon

position:935487:-1
position: 935487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:935565:-1
position: 935565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:933342-933441:-1:exon

position:933342:-1
position: 933342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:933441:-1
position: 933441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:932819-932900:-1:exon

position:932819:-1
position: 932819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:932900:-1
position: 932900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:928052-928124:-1:exon

position:928052:-1
position: 928052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:928124:-1
position: 928124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:927330-927503:-1:exon

position:927330:-1
position: 927330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:927503:-1
position: 927503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:927141-927241:-1:exon

position:927141:-1
position: 927141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:927241:-1
position: 927241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:924736-926046:-1:exon

position:924736:-1
position: 924736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:926046:-1
position: 926046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:920304-924705:-1:exon

position:924705:-1
position: 924705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SCAI
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SCAI
product: suppressor of cancer cell invasion, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 6 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032708076.1
SIO_010081: SCAI
subclass of: SO_0000673
so part of: SCAI
location: complement(join(920304..924705,924736..926046,927141..927241,927330..927503,928052..928124,932819..932900,933342..933441,935487..935565,936613..936714,937275..937376,938206..938358,938988..939086,939842..939938,940311..940409,940959..941045,941657..941752,948586..948717,950370..958245))
location: region:920304-958245:-1
so has part: feature:950370-958245:-1:exon
so has part: feature:948586-948717:-1:exon
so has part: feature:941657-941752:-1:exon
so has part: feature:940959-941045:-1:exon
so has part: feature:940311-940409:-1:exon
so has part: feature:939842-939938:-1:exon
so has part: feature:938988-939086:-1:exon
so has part: feature:938206-938358:-1:exon
so has part: feature:937275-937376:-1:exon
so has part: feature:936613-936714:-1:exon
so has part: feature:935487-935565:-1:exon
so has part: feature:933342-933441:-1:exon
so has part: feature:932819-932900:-1:exon
so has part: feature:928052-928124:-1:exon
so has part: feature:927330-927503:-1:exon
so has part: feature:927141-927241:-1:exon
so has part: feature:924736-926046:-1:exon
so has part: feature:920304-924705:-1:exon

position:958245:-1
position: 958245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:950370-958245:-1:exon

position:950370:-1
position: 950370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:948586-948717:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:941657-941752:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:940959-941045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:940311-940409:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:939842-939938:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:938988-939086:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:938206-938358:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:937275-937376:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:936613-936714:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:935487-935565:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:933342-933441:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:932819-932900:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:928052-928124:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:927330-927503:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:927141-927241:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:924736-926046:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:920304-924705:-1:exon

SCAI
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SCAI
product: suppressor of cancer cell invasion, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 6 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032708075.1
SIO_010081: SCAI
subclass of: SO_0000673
so part of: SCAI
location: complement(join(920304..924705,924736..926046,927141..927241,927330..927503,928052..928124,932819..932900,933342..933441,935487..935565,936613..936714,937275..937376,938206..938358,938988..939086,939842..939938,940311..940409,940959..941045,941657..941752,948586..948717,950307..958245))
location: region:920304-958245:-1
so has part: feature:950307-958245:-1:exon
so has part: feature:948586-948717:-1:exon
so has part: feature:941657-941752:-1:exon
so has part: feature:940959-941045:-1:exon
so has part: feature:940311-940409:-1:exon
so has part: feature:939842-939938:-1:exon
so has part: feature:938988-939086:-1:exon
so has part: feature:938206-938358:-1:exon
so has part: feature:937275-937376:-1:exon
so has part: feature:936613-936714:-1:exon
so has part: feature:935487-935565:-1:exon
so has part: feature:933342-933441:-1:exon
so has part: feature:932819-932900:-1:exon
so has part: feature:928052-928124:-1:exon
so has part: feature:927330-927503:-1:exon
so has part: feature:927141-927241:-1:exon
so has part: feature:924736-926046:-1:exon
so has part: feature:920304-924705:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:950307-958245:-1:exon

position:950307:-1
position: 950307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:948586-948717:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:941657-941752:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:940959-941045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:940311-940409:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:939842-939938:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:938988-939086:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:938206-938358:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:937275-937376:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:936613-936714:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:935487-935565:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:933342-933441:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:932819-932900:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:928052-928124:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:927330-927503:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:927141-927241:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:924736-926046:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:920304-924705:-1:exon

SCAI
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SCAI
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SCAI
translation: MSSGGAEDDIPQAERKTVTDFCYLLDKSKQLFNGLRDLPQYGQKQWQSYFGRTFDVYTKLWKFQQQHRQVLDNRYGLKRWQIGEIASKIGQLYYHYYLRTSETSYLNEAFSFYSAIRQRSYYSQVNKEDRPELVVKKLRYYARFIVVCLLLNKMDVVKDLVKELSDEIEDYTHRFNTEDQVEWNLVLQEVAAFIEADPVMVLNDDNTIVITSNRLSETGAPLLEQGMIVGQLALADALIIGNCNNQVKFSELTVDMFRMLQALEREPMNLASQMNKPGMQESTEKPARRENPHKYLLYKPTFSQLYTFLAASFKELPANSVLLIYLSATGVFPSGRSDSEGPYDFGGVLTNSNRDIINGDAIHKRNQSYKEMHCLHPGDLYPFTRKPLFIIVDSSNSVAYKNFTNLFGQPLVCLLSPTAYPKALQDQSQRGSLFTLFLNNPLMAFLFVSGLSSMRRGLWEKCQDYLRKINRDIAQLLTHSRSIDQSFLQFFGDEFLRLLLTRFIFCSATMRMHKIFRQETRNYPESYPQLPRDETVENPHLQKHILELASILDVRNVFLENTLDDY
SIO_010081: SCAI
subclass of: SO_0000673
so part of: SCAI
location: complement(join(925897..926046,927141..927241,927330..927503,928052..928124,932819..932900,933342..933441,935487..935565,936613..936714,937275..937376,938206..938358,938988..939086,939842..939938,940311..940409,940959..941045,941657..941752,948586..948692))
location: region:925897-948692:-1
so has part: feature:948586-948692:-1:exon
so has part: feature:941657-941752:-1:exon
so has part: feature:940959-941045:-1:exon
so has part: feature:940311-940409:-1:exon
so has part: feature:939842-939938:-1:exon
so has part: feature:938988-939086:-1:exon
so has part: feature:938206-938358:-1:exon
so has part: feature:937275-937376:-1:exon
so has part: feature:936613-936714:-1:exon
so has part: feature:935487-935565:-1:exon
so has part: feature:933342-933441:-1:exon
so has part: feature:932819-932900:-1:exon
so has part: feature:928052-928124:-1:exon
so has part: feature:927330-927503:-1:exon
so has part: feature:927141-927241:-1:exon
so has part: feature:925897-926046:-1:exon

XP_032563966.1
type: Protein
SIO_000068: ncbiprotein

position:925897:-1
position: 925897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:948692:-1
position: 948692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:948586-948692:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:941657-941752:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:940959-941045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:940311-940409:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:939842-939938:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:938988-939086:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:938206-938358:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:937275-937376:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:936613-936714:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:935487-935565:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:933342-933441:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:932819-932900:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:928052-928124:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:927330-927503:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:927141-927241:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:925897-926046:-1:exon

SCAI
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SCAI
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SCAI
translation: MSSGGAEDDIPQAERKTVTDFCYLLDKSKQLFNGLRDLPQYGQKQWQSYFGRTFDVYTKLWKFQQQHRQVLDNRYGLKRWQIGEIASKIGQLYYHYYLRTSETSYLNEAFSFYSAIRQRSYYSQVNKEDRPELVVKKLRYYARFIVVCLLLNKMDVVKDLVKELSDEIEDYTHRFNTEDQVEWNLVLQEVAAFIEADPVMVLNDDNTIVITSNRLSETGAPLLEQGMIVGQLALADALIIGNCNNQVKFSELTVDMFRMLQALEREPMNLASQMNKPGMQESTEKPARRENPHKYLLYKPTFSQLYTFLAASFKELPANSVLLIYLSATGVFPSGRSDSEGPYDFGGVLTNSNRDIINGDAIHKRNQSYKEMHCLHPGDLYPFTRKPLFIIVDSSNSVAYKNFTNLFGQPLVCLLSPTAYPKALQDQSQRGSLFTLFLNNPLMAFLFVSGLSSMRRGLWEKCQDYLRKINRDIAQLLTHSRSIDQSFLQFFGDEFLRLLLTRFIFCSATMRMHKIFRQETRNYPESYPQLPRDETVENPHLQKHILELASILDVRNVFLENTLDDY
SIO_010081: SCAI
subclass of: SO_0000673
so part of: SCAI
location: complement(join(925897..926046,927141..927241,927330..927503,928052..928124,932819..932900,933342..933441,935487..935565,936613..936714,937275..937376,938206..938358,938988..939086,939842..939938,940311..940409,940959..941045,941657..941752,948586..948692))
location: region:925897-948692:-1
so has part: feature:948586-948692:-1:exon
so has part: feature:941657-941752:-1:exon
so has part: feature:940959-941045:-1:exon
so has part: feature:940311-940409:-1:exon
so has part: feature:939842-939938:-1:exon
so has part: feature:938988-939086:-1:exon
so has part: feature:938206-938358:-1:exon
so has part: feature:937275-937376:-1:exon
so has part: feature:936613-936714:-1:exon
so has part: feature:935487-935565:-1:exon
so has part: feature:933342-933441:-1:exon
so has part: feature:932819-932900:-1:exon
so has part: feature:928052-928124:-1:exon
so has part: feature:927330-927503:-1:exon
so has part: feature:927141-927241:-1:exon
so has part: feature:925897-926046:-1:exon

XP_032563967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:948586-948692:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:941657-941752:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:940959-941045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:940311-940409:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:939842-939938:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:938988-939086:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:938206-938358:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:937275-937376:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:936613-936714:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:935487-935565:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:933342-933441:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:932819-932900:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:928052-928124:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:927330-927503:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:927141-927241:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:925897-926046:-1:exon

SCAI
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SCAI
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SCAI
translation: MSSGGAEDDIPQAERKTVTDFCYLLDKSKQLFNGLRDLPQYGQKQWQSYFGRTFDVYTKLWKFQQQHRQVLDNRYGLKRWQIGEIASKIGQLYYHYYLRTSETSYLNEAFSFYSAIRQRSYYSQVNKEDRPELVVKKLRYYARFIVVCLLLNKMDVVKDLVKELSDEIEDYTHRFNTEDQVEWNLVLQEVAAFIEADPVMVLNDDNTIVITSNRLSETGAPLLEQGMIVGQLALADALIIGNCNNQVKFSELTVDMFRMLQALEREPMNLASQMNKPGMQESTEKPARRENPHKYLLYKPTFSQLYTFLAASFKELPANSVLLIYLSATGVFPSGRSDSEGPYDFGGVLTNSNRDIINGDAIHKRNQSYKEMHCLHPGDLYPFTRKPLFIIVDSSNSVAYKNFTNLFGQPLVCLLSPTAYPKALQDQSQRGSLFTLFLNNPLMAFLFVSGLSSMRRGLWEKCQDYLRKINRDIAQLLTHSRSIDQSFLQFFGDEFLRLLLTRFIFCSATMRMHKIFRQETRNYPESYPQLPRDETVENPHLQKHILELASILDVRNVFLENTLDDY
SIO_010081: SCAI
subclass of: SO_0000673
so part of: SCAI
location: complement(join(925897..926046,927141..927241,927330..927503,928052..928124,932819..932900,933342..933441,935487..935565,936613..936714,937275..937376,938206..938358,938988..939086,939842..939938,940311..940409,940959..941045,941657..941752,948586..948692))
location: region:925897-948692:-1
so has part: feature:948586-948692:-1:exon
so has part: feature:941657-941752:-1:exon
so has part: feature:940959-941045:-1:exon
so has part: feature:940311-940409:-1:exon
so has part: feature:939842-939938:-1:exon
so has part: feature:938988-939086:-1:exon
so has part: feature:938206-938358:-1:exon
so has part: feature:937275-937376:-1:exon
so has part: feature:936613-936714:-1:exon
so has part: feature:935487-935565:-1:exon
so has part: feature:933342-933441:-1:exon
so has part: feature:932819-932900:-1:exon
so has part: feature:928052-928124:-1:exon
so has part: feature:927330-927503:-1:exon
so has part: feature:927141-927241:-1:exon
so has part: feature:925897-926046:-1:exon

XP_032563968.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:948586-948692:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:941657-941752:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:940959-941045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:940311-940409:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:939842-939938:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:938988-939086:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:938206-938358:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:937275-937376:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:936613-936714:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:935487-935565:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:933342-933441:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:932819-932900:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:928052-928124:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:927330-927503:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:927141-927241:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:925897-926046:-1:exon

RPL35
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: RPL35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 959229..960933
location: region:959229-960933:1
so has part: feature:959229-960933:1:exon
subclass of: SO_0000010

116796980
type: Gene
SIO_000068: ncbigene

position:959229:1
position: 959229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:960933:1
position: 960933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:959229-960933:1:exon

RPL35
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: RPL35
product: ribosomal protein L35
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 ESTs, 4 long SRA reads, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_032708031.1
SIO_010081: RPL35
subclass of: SO_0000673
so part of: RPL35
location: join(959229..959331,959603..959739,960009..960090,960744..960933)
location: region:959229-960933:1
so has part: feature:959229-959331:1:exon
so has part: feature:959603-959739:1:exon
so has part: feature:960009-960090:1:exon
so has part: feature:960744-960933:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:959229-959331:1:exon

position:959331:1
position: 959331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:959603-959739:1:exon

position:959603:1
position: 959603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:959739:1
position: 959739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:960009-960090:1:exon

position:960009:1
position: 960009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:960090:1
position: 960090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:960744-960933:1:exon

position:960744:1
position: 960744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPL35
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: RPL35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L35
translation: MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPARKYAIKA
SIO_010081: RPL35
subclass of: SO_0000673
so part of: RPL35
location: join(959329..959331,959603..959739,960009..960090,960744..960893)
location: region:959329-960893:1
so has part: feature:959329-959331:1:exon
so has part: feature:959603-959739:1:exon
so has part: feature:960009-960090:1:exon
so has part: feature:960744-960893:1:exon

XP_032563922.1
type: Protein
SIO_000068: ncbiprotein

position:959329:1
position: 959329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:960893:1
position: 960893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:959329-959331:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:959603-959739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:960009-960090:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:960744-960893:1:exon

OLFML2A
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: OLFML2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(967139..974618)
location: region:967139-974618:-1
so has part: feature:967139-974618:-1:exon
subclass of: SO_0000010

116796978
type: Gene
SIO_000068: ncbigene

position:967139:-1
position: 967139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974618:-1
position: 974618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:967139-974618:-1:exon

OLFML2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: OLFML2A
product: olfactomedin like 2A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 4 long SRA reads, 16 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032708028.1
SIO_010081: OLFML2A
subclass of: SO_0000673
so part of: OLFML2A
location: complement(join(967139..968561,968805..968990,969152..969382,969493..969754,969973..970158,970253..970360,970521..970784,974518..974618))
location: region:967139-974618:-1
so has part: feature:974518-974618:-1:exon
so has part: feature:970521-970784:-1:exon
so has part: feature:970253-970360:-1:exon
so has part: feature:969973-970158:-1:exon
so has part: feature:969493-969754:-1:exon
so has part: feature:969152-969382:-1:exon
so has part: feature:968805-968990:-1:exon
so has part: feature:967139-968561:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:974518-974618:-1:exon

position:974518:-1
position: 974518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:970521-970784:-1:exon

position:970521:-1
position: 970521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:970784:-1
position: 970784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:970253-970360:-1:exon

position:970253:-1
position: 970253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:970360:-1
position: 970360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:969973-970158:-1:exon

position:969973:-1
position: 969973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:970158:-1
position: 970158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:969493-969754:-1:exon

position:969493:-1
position: 969493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:969754:-1
position: 969754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:969152-969382:-1:exon

position:969152:-1
position: 969152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:969382:-1
position: 969382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:968805-968990:-1:exon

position:968805:-1
position: 968805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:968990:-1
position: 968990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:967139-968561:-1:exon

position:968561:-1
position: 968561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OLFML2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: OLFML2A
product: olfactomedin like 2A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 3 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032708027.1
SIO_010081: OLFML2A
subclass of: SO_0000673
so part of: OLFML2A
location: complement(join(967139..968561,968805..968990,969152..969382,969493..969754,969973..970158,970253..970360,970521..971752))
location: region:967139-971752:-1
so has part: feature:970521-971752:-1:exon
so has part: feature:970253-970360:-1:exon
so has part: feature:969973-970158:-1:exon
so has part: feature:969493-969754:-1:exon
so has part: feature:969152-969382:-1:exon
so has part: feature:968805-968990:-1:exon
so has part: feature:967139-968561:-1:exon

position:971752:-1
position: 971752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:970521-971752:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:970253-970360:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:969973-970158:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:969493-969754:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:969152-969382:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:968805-968990:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:967139-968561:-1:exon

OLFML2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: OLFML2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactomedin-like protein 2A isoform X2
translation: MRALLLPALLLPALAAARGTATALGDTDQVRMTSEGSDCRCKCILRPLSKDACSRVRNGSARVEDFYTVETVSSGADCKCSCTAPPSSLNPCENEWKMEKLKKQAPELFKLQSMVDLLEGTLYSMDLMKVHSYISKVVAQMNTLEETIKTNLSRENDFMKESVLHLTNQMKRYENYSDIMLSIKKEISNLGYQLLQKDAAAVPESKAQDTAGGREKEAGRYPSTRKALGDKAAPRAPKEKPLKPEKPKKENTKARAGSQPTPKPKPLAHQQTVVRGITYYKVGQAGAAEGPAGSRESPARGPAVPEQQEERGPPPPPAEGTPAQAVAQTETAVPNTTAVPSTAPAPRSTTHSPPSPLGQGDDSTGDPETPNRVKEVECEGTIESVEPPMEHHSYGRNEGAWMKDPAAKDDRIYVTNYYYGNSLVEFRSLDNFKQGRWSNLYKLPYNWIGTGHVVYRGAFYYNRAFTKNIIKYDLKERYVAGWALLHDVVYEDTTPWKWRGHSDIDFAVDESGLWVIYPSVDYDYSQQEVIVLSRLDPGDLSVRKETTWKTGLKRNTYGNCFIICGILYAVDTYSQKEGQISYAFDTHTNTEAELRLPFLNHYSFTTQIDYNPKEKVLYAWDNGHQMTYGLHFVV
SIO_010081: OLFML2A
subclass of: SO_0000673
so part of: OLFML2A
location: complement(join(967960..968561,968805..968990,969152..969382,969493..969754,969973..970158,970253..970360,970521..970784,974518..974583))
location: region:967960-974583:-1
so has part: feature:974518-974583:-1:exon
so has part: feature:970521-970784:-1:exon
so has part: feature:970253-970360:-1:exon
so has part: feature:969973-970158:-1:exon
so has part: feature:969493-969754:-1:exon
so has part: feature:969152-969382:-1:exon
so has part: feature:968805-968990:-1:exon
so has part: feature:967960-968561:-1:exon

XP_032563919.1
type: Protein
SIO_000068: ncbiprotein

position:967960:-1
position: 967960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974583:-1
position: 974583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:974518-974583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:970521-970784:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:970253-970360:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:969973-970158:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:969493-969754:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:969152-969382:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:968805-968990:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:967960-968561:-1:exon

OLFML2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: OLFML2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactomedin-like protein 2A isoform X1
translation: MAVMACWGQQGPGGTPGSPCVPQALGDTDQVRMTSEGSDCRCKCILRPLSKDACSRVRNGSARVEDFYTVETVSSGADCKCSCTAPPSSLNPCENEWKMEKLKKQAPELFKLQSMVDLLEGTLYSMDLMKVHSYISKVVAQMNTLEETIKTNLSRENDFMKESVLHLTNQMKRYENYSDIMLSIKKEISNLGYQLLQKDAAAVPESKAQDTAGGREKEAGRYPSTRKALGDKAAPRAPKEKPLKPEKPKKENTKARAGSQPTPKPKPLAHQQTVVRGITYYKVGQAGAAEGPAGSRESPARGPAVPEQQEERGPPPPPAEGTPAQAVAQTETAVPNTTAVPSTAPAPRSTTHSPPSPLGQGDDSTGDPETPNRVKEVECEGTIESVEPPMEHHSYGRNEGAWMKDPAAKDDRIYVTNYYYGNSLVEFRSLDNFKQGRWSNLYKLPYNWIGTGHVVYRGAFYYNRAFTKNIIKYDLKERYVAGWALLHDVVYEDTTPWKWRGHSDIDFAVDESGLWVIYPSVDYDYSQQEVIVLSRLDPGDLSVRKETTWKTGLKRNTYGNCFIICGILYAVDTYSQKEGQISYAFDTHTNTEAELRLPFLNHYSFTTQIDYNPKEKVLYAWDNGHQMTYGLHFVV
SIO_010081: OLFML2A
subclass of: SO_0000673
so part of: OLFML2A
location: complement(join(967960..968561,968805..968990,969152..969382,969493..969754,969973..970158,970253..970360,970521..970853))
location: region:967960-970853:-1
so has part: feature:970521-970853:-1:exon
so has part: feature:970253-970360:-1:exon
so has part: feature:969973-970158:-1:exon
so has part: feature:969493-969754:-1:exon
so has part: feature:969152-969382:-1:exon
so has part: feature:968805-968990:-1:exon
so has part: feature:967960-968561:-1:exon

XP_032563918.1
type: Protein
SIO_000068: ncbiprotein

position:970853:-1
position: 970853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:970521-970853:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:970253-970360:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:969973-970158:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:969493-969754:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:969152-969382:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:968805-968990:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:967960-968561:-1:exon

NR6A1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: NR6A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 975501..1046604
location: region:975501-1046604:1
so has part: feature:975501-1046604:1:exon
subclass of: SO_0000010

116796979
type: Gene
SIO_000068: ncbigene

position:975501:1
position: 975501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046604:1
position: 1046604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:975501-1046604:1:exon

NR6A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: NR6A1
product: nuclear receptor subfamily 6 group A member 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 16 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032708029.1
SIO_010081: NR6A1
subclass of: SO_0000673
so part of: NR6A1
location: join(975501..975533,988261..988320,1032963..1033193,1036193..1036248,1038157..1038314,1039154..1039381,1039818..1040072,1043396..1043517,1045272..1045423,1046377..1046604)
location: region:975501-1046604:1
so has part: feature:975501-975533:1:exon
so has part: feature:988261-988320:1:exon
so has part: feature:1032963-1033193:1:exon
so has part: feature:1036193-1036248:1:exon
so has part: feature:1038157-1038314:1:exon
so has part: feature:1039154-1039381:1:exon
so has part: feature:1039818-1040072:1:exon
so has part: feature:1043396-1043517:1:exon
so has part: feature:1045272-1045423:1:exon
so has part: feature:1046377-1046604:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:975501-975533:1:exon

position:975533:1
position: 975533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:988261-988320:1:exon

position:988261:1
position: 988261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:988320:1
position: 988320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1032963-1033193:1:exon

position:1032963:1
position: 1032963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1033193:1
position: 1033193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1036193-1036248:1:exon

position:1036193:1
position: 1036193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1036248:1
position: 1036248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1038157-1038314:1:exon

position:1038157:1
position: 1038157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038314:1
position: 1038314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1039154-1039381:1:exon

position:1039154:1
position: 1039154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1039381:1
position: 1039381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1039818-1040072:1:exon

position:1039818:1
position: 1039818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040072:1
position: 1040072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1043396-1043517:1:exon

position:1043396:1
position: 1043396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1043517:1
position: 1043517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1045272-1045423:1:exon

position:1045272:1
position: 1045272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045423:1
position: 1045423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1046377-1046604:1:exon

position:1046377:1
position: 1046377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116796981
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116796981
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(983720..1007794)
location: region:983720-1007794:-1
so has part: feature:983720-1007794:-1:exon
subclass of: SO_0000011

116796981
type: Gene
SIO_000068: ncbigene

position:983720:-1
position: 983720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1007794:-1
position: 1007794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:983720-1007794:-1:exon

LOC116796981
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116796981
product: uncharacterized LOC116796981, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004360553.1
SIO_010081: LOC116796981
subclass of: SO_0000673
so part of: LOC116796981
location: complement(join(983720..986143,994774..994802,1007700..1007794))
location: region:983720-1007794:-1
so has part: feature:1007700-1007794:-1:exon
so has part: feature:994774-994802:-1:exon
so has part: feature:983720-986143:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1007700-1007794:-1:exon

position:1007700:-1
position: 1007700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:994774-994802:-1:exon

position:994774:-1
position: 994774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:994802:-1
position: 994802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:983720-986143:-1:exon

position:986143:-1
position: 986143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116796981
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116796981
product: uncharacterized LOC116796981, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004360554.1
SIO_010081: LOC116796981
subclass of: SO_0000673
so part of: LOC116796981
location: complement(join(983720..986143,994263..994322,994774..994802,1007700..1007794))
location: region:983720-1007794:-1
so has part: feature:1007700-1007794:-1:exon
so has part: feature:994774-994802:-1:exon
so has part: feature:994263-994322:-1:exon
so has part: feature:983720-986143:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1007700-1007794:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:994774-994802:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:994263-994322:-1:exon

position:994263:-1
position: 994263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:994322:-1
position: 994322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:983720-986143:-1:exon

NR6A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: NR6A1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: nuclear receptor subfamily 6 group A member 1
translation: MSSSSPVLPMNSMGNERVDQRTCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISEEEIERIMSGQEFEGEANMSWSNNGDSDHSSPGNGVSESNQPSPVSTPSSSRSVELNGFAALRDQYIGTPVSTHYQYLPHLFSYSAHSALVPPQTRSLDPQSHSLINQLVSAEDLEPLGTPMLIEDGYKVTQAELFALLCRLADELLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILLSSLTVYSKQIFGDLADVTSKYSPSDDELHRFSEEGMEVMERLIYLFRKFNQLKVSNEEYACMKAINFLNQDIRGLTNASQLEQLNKRYWYVCQDFTEYKYPHQPXRFPDLMMCLPEIRYIAGKMVNVPLEQLPLLFKAVLHSCKTSVSKE
SIO_010081: NR6A1
subclass of: SO_0000673
so part of: NR6A1
location: join(988278..988320,1032963..1033193,1036193..1036248,1038157..1038314,1039154..1039381,1039818..1040072,1043396..1043517,1045272..1045423,1046377..1046465)
location: region:988278-1046465:1
so has part: feature:988278-988320:1:exon
so has part: feature:1032963-1033193:1:exon
so has part: feature:1036193-1036248:1:exon
so has part: feature:1038157-1038314:1:exon
so has part: feature:1039154-1039381:1:exon
so has part: feature:1039818-1040072:1:exon
so has part: feature:1043396-1043517:1:exon
so has part: feature:1045272-1045423:1:exon
so has part: feature:1046377-1046465:1:exon

XP_032563920.1
type: Protein
SIO_000068: ncbiprotein

position:988278:1
position: 988278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046465:1
position: 1046465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:988278-988320:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1032963-1033193:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1036193-1036248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1038157-1038314:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1039154-1039381:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1039818-1040072:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1043396-1043517:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1045272-1045423:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1046377-1046465:1:exon

LOC116796982
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116796982
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1022803..1026039)
location: region:1022803-1026039:-1
so has part: feature:1022803-1026039:-1:exon
subclass of: SO_0000011

116796982
type: Gene
SIO_000068: ncbigene

position:1022803:-1
position: 1022803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1026039:-1
position: 1026039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1022803-1026039:-1:exon

LOC116796982
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116796982
product: uncharacterized LOC116796982
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004360555.1
SIO_010081: LOC116796982
subclass of: SO_0000673
so part of: LOC116796982
location: complement(join(1022803..1023178,1024356..1024556,1025603..1026039))
location: region:1022803-1026039:-1
so has part: feature:1025603-1026039:-1:exon
so has part: feature:1024356-1024556:-1:exon
so has part: feature:1022803-1023178:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1025603-1026039:-1:exon

position:1025603:-1
position: 1025603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1024356-1024556:-1:exon

position:1024356:-1
position: 1024356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1024556:-1
position: 1024556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1022803-1023178:-1:exon

position:1023178:-1
position: 1023178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NR5A1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: NR5A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1057231..1078111
location: region:1057231-1078111:1
so has part: feature:1057231-1078111:1:exon
subclass of: SO_0000010

116797258
type: Gene
SIO_000068: ncbigene

position:1057231:1
position: 1057231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1078111:1
position: 1078111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1057231-1078111:1:exon

NR5A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: NR5A1
product: nuclear receptor subfamily 5 group A member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 21 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032708645.1
SIO_010081: NR5A1
subclass of: SO_0000673
so part of: NR5A1
location: join(1057231..1057468,1059472..1059587,1060014..1060155,1063870..1064510,1071474..1071593,1072178..1072325,1076228..1076643)
location: region:1057231-1076643:1
so has part: feature:1057231-1057468:1:exon
so has part: feature:1059472-1059587:1:exon
so has part: feature:1060014-1060155:1:exon
so has part: feature:1063870-1064510:1:exon
so has part: feature:1071474-1071593:1:exon
so has part: feature:1072178-1072325:1:exon
so has part: feature:1076228-1076643:1:exon

position:1076643:1
position: 1076643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1057231-1057468:1:exon

position:1057468:1
position: 1057468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1059472-1059587:1:exon

position:1059472:1
position: 1059472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1059587:1
position: 1059587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1060014-1060155:1:exon

position:1060014:1
position: 1060014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1060155:1
position: 1060155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1063870-1064510:1:exon

position:1063870:1
position: 1063870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1064510:1
position: 1064510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1071474-1071593:1:exon

position:1071474:1
position: 1071474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1071593:1
position: 1071593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1072178-1072325:1:exon

position:1072178:1
position: 1072178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1072325:1
position: 1072325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1076228-1076643:1:exon

position:1076228:1
position: 1076228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NR5A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: NR5A1
product: nuclear receptor subfamily 5 group A member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 4 long SRA reads, 22 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032708644.1
SIO_010081: NR5A1
subclass of: SO_0000673
so part of: NR5A1
location: join(1057357..1057468,1059469..1059587,1060014..1060155,1063870..1064510,1071474..1071593,1072178..1072325,1076228..1078111)
location: region:1057357-1078111:1
so has part: feature:1057357-1057468:1:exon
so has part: feature:1059469-1059587:1:exon
so has part: feature:1060014-1060155:1:exon
so has part: feature:1063870-1064510:1:exon
so has part: feature:1071474-1071593:1:exon
so has part: feature:1072178-1072325:1:exon
so has part: feature:1076228-1078111:1:exon

position:1057357:1
position: 1057357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1057357-1057468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1059469-1059587:1:exon

position:1059469:1
position: 1059469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1060014-1060155:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1063870-1064510:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1071474-1071593:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1072178-1072325:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1076228-1078111:1:exon

NR5A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: NR5A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: steroidogenic factor 1
translation: MDYSYDEDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCPYCRFQKCLTVGMRLEAVRADRMRGGRNKFGPMYKRDRALKQQKKALIRANGFKLETVPQIMSPVQSDYSLSSTIHSIHAMSKTLPPNPAALTPVDYERSPYGTPSLGVTVPGHAPLPGYHYPSFPNRTIKSEYPDHYTNVHESVPTYVYPETYPSSSPPDIPEVILKLLQLEPDEAQVKARILACLQQEQGKGRHEKLSTFGLMCKMADQTLFSIVEWARSCIFFKELEVGDQMKLLQNCWSELLVFDHVYRQLQHGKEHSVLLVTGQEVDMSTIAAQAGSILNTLVLRAQELVLHLHSLQVDRHEFVCLKFLILFSLDVKYLENHTLAKDAQEKANAALLEYTVCHYPHSTDKFRQLLLWLAEVRALSMQAEEYLYHKHLSGEVPCNNLLIEMLHAKRT
SIO_010081: NR5A1
subclass of: SO_0000673
so part of: NR5A1
location: join(1059486..1059587,1060014..1060155,1063870..1064510,1071474..1071593,1072178..1072325,1076228..1076475)
location: region:1059486-1076475:1
so has part: feature:1059486-1059587:1:exon
so has part: feature:1060014-1060155:1:exon
so has part: feature:1063870-1064510:1:exon
so has part: feature:1071474-1071593:1:exon
so has part: feature:1072178-1072325:1:exon
so has part: feature:1076228-1076475:1:exon

XP_032564535.1
type: Protein
SIO_000068: ncbiprotein

position:1059486:1
position: 1059486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1076475:1
position: 1076475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1059486-1059587:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1060014-1060155:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1063870-1064510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1071474-1071593:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1072178-1072325:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1076228-1076475:1:exon

NR5A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: NR5A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: steroidogenic factor 1
translation: MDYSYDEDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCPYCRFQKCLTVGMRLEAVRADRMRGGRNKFGPMYKRDRALKQQKKALIRANGFKLETVPQIMSPVQSDYSLSSTIHSIHAMSKTLPPNPAALTPVDYERSPYGTPSLGVTVPGHAPLPGYHYPSFPNRTIKSEYPDHYTNVHESVPTYVYPETYPSSSPPDIPEVILKLLQLEPDEAQVKARILACLQQEQGKGRHEKLSTFGLMCKMADQTLFSIVEWARSCIFFKELEVGDQMKLLQNCWSELLVFDHVYRQLQHGKEHSVLLVTGQEVDMSTIAAQAGSILNTLVLRAQELVLHLHSLQVDRHEFVCLKFLILFSLDVKYLENHTLAKDAQEKANAALLEYTVCHYPHSTDKFRQLLLWLAEVRALSMQAEEYLYHKHLSGEVPCNNLLIEMLHAKRT
SIO_010081: NR5A1
subclass of: SO_0000673
so part of: NR5A1
location: join(1059486..1059587,1060014..1060155,1063870..1064510,1071474..1071593,1072178..1072325,1076228..1076475)
location: region:1059486-1076475:1
so has part: feature:1059486-1059587:1:exon
so has part: feature:1060014-1060155:1:exon
so has part: feature:1063870-1064510:1:exon
so has part: feature:1071474-1071593:1:exon
so has part: feature:1072178-1072325:1:exon
so has part: feature:1076228-1076475:1:exon

XP_032564536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1059486-1059587:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1060014-1060155:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1063870-1064510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1071474-1071593:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1072178-1072325:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1076228-1076475:1:exon

ADGRD2
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: ADGRD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1081800..1103050)
location: region:1081800-1103050:-1
so has part: feature:1081800-1103050:-1:exon
subclass of: SO_0000010

116797272
type: Gene
SIO_000068: ncbigene

position:1081800:-1
position: 1081800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1103050:-1
position: 1103050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1081800-1103050:-1:exon

ADGRD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ADGRD2
product: adhesion G protein-coupled receptor D2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032708659.1
SIO_010081: ADGRD2
subclass of: SO_0000673
so part of: ADGRD2
location: complement(join(1081800..1081915,1082976..1083006,1084991..1085049,1085545..1085686,1086012..1086065,1086273..1086314,1090369..1090489,1091374..1091489,1092106..1092239,1093012..1093165,1093451..1093553,1094005..1094108,1094220..1094346,1095445..1095500,1095803..1095908,1096497..1096608,1096884..1097018,1097352..1097463,1097733..1098014,1098390..1098475,1098964..1099062,1099687..1100340,1100492..1100722,1101391..1101451,1101538..1101615,1103008..1103050))
location: region:1081800-1103050:-1
so has part: feature:1103008-1103050:-1:exon
so has part: feature:1101538-1101615:-1:exon
so has part: feature:1101391-1101451:-1:exon
so has part: feature:1100492-1100722:-1:exon
so has part: feature:1099687-1100340:-1:exon
so has part: feature:1098964-1099062:-1:exon
so has part: feature:1098390-1098475:-1:exon
so has part: feature:1097733-1098014:-1:exon
so has part: feature:1097352-1097463:-1:exon
so has part: feature:1096884-1097018:-1:exon
so has part: feature:1096497-1096608:-1:exon
so has part: feature:1095803-1095908:-1:exon
so has part: feature:1095445-1095500:-1:exon
so has part: feature:1094220-1094346:-1:exon
so has part: feature:1094005-1094108:-1:exon
so has part: feature:1093451-1093553:-1:exon
so has part: feature:1093012-1093165:-1:exon
so has part: feature:1092106-1092239:-1:exon
so has part: feature:1091374-1091489:-1:exon
so has part: feature:1090369-1090489:-1:exon
so has part: feature:1086273-1086314:-1:exon
so has part: feature:1086012-1086065:-1:exon
so has part: feature:1085545-1085686:-1:exon
so has part: feature:1084991-1085049:-1:exon
so has part: feature:1082976-1083006:-1:exon
so has part: feature:1081800-1081915:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1103008-1103050:-1:exon

position:1103008:-1
position: 1103008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1101538-1101615:-1:exon

position:1101538:-1
position: 1101538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1101615:-1
position: 1101615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1101391-1101451:-1:exon

position:1101391:-1
position: 1101391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1101451:-1
position: 1101451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1100492-1100722:-1:exon

position:1100492:-1
position: 1100492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1100722:-1
position: 1100722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1099687-1100340:-1:exon

position:1099687:-1
position: 1099687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1100340:-1
position: 1100340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1098964-1099062:-1:exon

position:1098964:-1
position: 1098964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1099062:-1
position: 1099062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1098390-1098475:-1:exon

position:1098390:-1
position: 1098390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1098475:-1
position: 1098475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1097733-1098014:-1:exon

position:1097733:-1
position: 1097733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1098014:-1
position: 1098014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1097352-1097463:-1:exon

position:1097352:-1
position: 1097352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1097463:-1
position: 1097463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1096884-1097018:-1:exon

position:1096884:-1
position: 1096884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1097018:-1
position: 1097018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1096497-1096608:-1:exon

position:1096497:-1
position: 1096497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1096608:-1
position: 1096608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1095803-1095908:-1:exon

position:1095803:-1
position: 1095803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1095908:-1
position: 1095908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1095445-1095500:-1:exon

position:1095445:-1
position: 1095445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1095500:-1
position: 1095500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1094220-1094346:-1:exon

position:1094220:-1
position: 1094220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1094346:-1
position: 1094346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1094005-1094108:-1:exon

position:1094005:-1
position: 1094005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1094108:-1
position: 1094108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1093451-1093553:-1:exon

position:1093451:-1
position: 1093451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1093553:-1
position: 1093553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1093012-1093165:-1:exon

position:1093012:-1
position: 1093012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1093165:-1
position: 1093165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1092106-1092239:-1:exon

position:1092106:-1
position: 1092106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1092239:-1
position: 1092239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1091374-1091489:-1:exon

position:1091374:-1
position: 1091374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1091489:-1
position: 1091489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1090369-1090489:-1:exon

position:1090369:-1
position: 1090369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1090489:-1
position: 1090489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1086273-1086314:-1:exon

position:1086273:-1
position: 1086273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1086314:-1
position: 1086314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1086012-1086065:-1:exon

position:1086012:-1
position: 1086012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1086065:-1
position: 1086065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1085545-1085686:-1:exon

position:1085545:-1
position: 1085545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1085686:-1
position: 1085686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1084991-1085049:-1:exon

position:1084991:-1
position: 1084991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1085049:-1
position: 1085049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1082976-1083006:-1:exon

position:1082976:-1
position: 1082976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1083006:-1
position: 1083006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1081800-1081915:-1:exon

position:1081915:-1
position: 1081915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADGRD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ADGRD2
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(1081878..1081880),aa:OTHER)
product: LOW QUALITY PROTEIN: adhesion G-protein coupled receptor D2
translation: MVNMFRRNLRLDSWFFSFLVSLSRSLLAFAALAKNQTSKGFAPVTIETPRHTYEYVATALDWWHADRYCEQHFAQLLFEPQHGEQDSFSKLLQSHHITGSVWLKERDGVLHKPKRRRGHSVPVLVFRDKTDTKYVKVLSDFPALPAVTACAHLQWDTRTQEIATIFSYAVPAFINEFQLRGFVDEEGFVRFALIVHGHHSPYLPVFRADGQWHHFCVTWQQENGTWAIYADGKRRASASGLCAAGPAVPQAIYGQGTFIIGQDQDSLGGTFRAKESFSGNITDLHIWQKVLGTEQIEKVRSCWVTEQDLVFGWSSNALELESSVQTVTTQLLCPGPVEECRVLEAGSSGFSYASCLQTLPFICQYRKDAYWQLKRAQLESSHSLVSHVNTLAARSVVPDSIFTSGVQDMNLSVALGALDALAKVLREGEMSMLEPSDLLEVLQLLKQVSDVEVQEGDDLEMLEQLGQYYMEVTALILEEQNTGTWSSVSQVVRGPMAVVELCDRMVSLLVPLLTAERTRITIQHRNIGMEVRELELSGEELSSEAYVVQTVEKGRHDFIEVPAEEMQRLKARGLRRVTVKNLWFGYGALQRCLSGTAVSQHVAASDGGHKYVSAAVGTAVISSTLLCNYQEISTSVRYRLQHRAQDLSDTLVWPICAFWNFSLSPDAGGMWSTAGCSVVTSLQDSTACFCNHTTNFAILLQVYELKMTAKEEFTLQTLTFIGCGVSFCALVVTFILFLVVRVPKSERTTVHKNLIFALAAGEALLMLSELAKSNQVLCFMVTAFLHLFFMAAFSWMLVEGLLLWSKVVAVNMSEDRRMKFYYVTGWGLPVLIVGVTLATSFNKYVAANHCWLNAQTNVIWAFVGPVLFILAVNTFVLLRVVTVTVSSARRRSKMLTPNSSLESQIGAQIWATAKPVLVLLPVLGLTWVCGVFVHLSIIWAYVFIVLNSLQGLYIFLVYAIYNSEVRNAIQRMKDKKKALSFTNCSHPINYLSSPRNTTSWETGKLGPAAESALPSPAQKDPPVKNITNRGNFGAKIPMGISSIMSPERPAVELTAFKPSVSKQGILRLFLRXCHPEAVQPSSSHWTQEKGRNGGTQE
SIO_010081: ADGRD2
subclass of: SO_0000673
so part of: ADGRD2
location: complement(join(1081800..1081915,1082976..1083006,1084991..1085049,1085545..1085686,1086012..1086065,1086273..1086314,1090369..1090489,1091374..1091489,1092106..1092239,1093012..1093165,1093451..1093553,1094005..1094108,1094220..1094346,1095445..1095500,1095803..1095908,1096497..1096608,1096884..1097018,1097352..1097463,1097733..1098014,1098390..1098475,1098964..1099062,1099687..1100340,1100492..1100722,1101391..1101451,1101538..1101594))
location: region:1081800-1101594:-1
so has part: feature:1101538-1101594:-1:exon
so has part: feature:1101391-1101451:-1:exon
so has part: feature:1100492-1100722:-1:exon
so has part: feature:1099687-1100340:-1:exon
so has part: feature:1098964-1099062:-1:exon
so has part: feature:1098390-1098475:-1:exon
so has part: feature:1097733-1098014:-1:exon
so has part: feature:1097352-1097463:-1:exon
so has part: feature:1096884-1097018:-1:exon
so has part: feature:1096497-1096608:-1:exon
so has part: feature:1095803-1095908:-1:exon
so has part: feature:1095445-1095500:-1:exon
so has part: feature:1094220-1094346:-1:exon
so has part: feature:1094005-1094108:-1:exon
so has part: feature:1093451-1093553:-1:exon
so has part: feature:1093012-1093165:-1:exon
so has part: feature:1092106-1092239:-1:exon
so has part: feature:1091374-1091489:-1:exon
so has part: feature:1090369-1090489:-1:exon
so has part: feature:1086273-1086314:-1:exon
so has part: feature:1086012-1086065:-1:exon
so has part: feature:1085545-1085686:-1:exon
so has part: feature:1084991-1085049:-1:exon
so has part: feature:1082976-1083006:-1:exon
so has part: feature:1081800-1081915:-1:exon

XP_032564550.1
type: Protein
SIO_000068: ncbiprotein

position:1101594:-1
position: 1101594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1101538-1101594:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1101391-1101451:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1100492-1100722:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1099687-1100340:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1098964-1099062:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1098390-1098475:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1097733-1098014:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1097352-1097463:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1096884-1097018:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1096497-1096608:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1095803-1095908:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1095445-1095500:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1094220-1094346:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1094005-1094108:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1093451-1093553:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1093012-1093165:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1092106-1092239:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1091374-1091489:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1090369-1090489:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1086273-1086314:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1086012-1086065:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1085545-1085686:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1084991-1085049:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1082976-1083006:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1081800-1081915:-1:exon

PSMB7
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: PSMB7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1112504..1132319
location: region:1112504-1132319:1
so has part: feature:1112504-1132319:1:exon
subclass of: SO_0000010

116796969
type: Gene
SIO_000068: ncbigene

position:1112504:1
position: 1112504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1132319:1
position: 1132319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1112504-1132319:1:exon

PSMB7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PSMB7
product: proteasome 20S subunit beta 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 8 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_032707999.1
SIO_010081: PSMB7
subclass of: SO_0000673
so part of: PSMB7
location: join(1112504..1112588,1112746..1112839,1112956..1113053,1113398..1113538,1114097..1114212,1120330..1120388,1131382..1131533,1132154..1132319)
location: region:1112504-1132319:1
so has part: feature:1112504-1112588:1:exon
so has part: feature:1112746-1112839:1:exon
so has part: feature:1112956-1113053:1:exon
so has part: feature:1113398-1113538:1:exon
so has part: feature:1114097-1114212:1:exon
so has part: feature:1120330-1120388:1:exon
so has part: feature:1131382-1131533:1:exon
so has part: feature:1132154-1132319:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1112504-1112588:1:exon

position:1112588:1
position: 1112588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1112746-1112839:1:exon

position:1112746:1
position: 1112746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1112839:1
position: 1112839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1112956-1113053:1:exon

position:1112956:1
position: 1112956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1113053:1
position: 1113053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1113398-1113538:1:exon

position:1113398:1
position: 1113398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1113538:1
position: 1113538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1114097-1114212:1:exon

position:1114097:1
position: 1114097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1114212:1
position: 1114212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1120330-1120388:1:exon

position:1120330:1
position: 1120330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1120388:1
position: 1120388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1131382-1131533:1:exon

position:1131382:1
position: 1131382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1131533:1
position: 1131533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1132154-1132319:1:exon

position:1132154:1
position: 1132154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSMB7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PSMB7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome subunit beta type-7
translation: MAAVSVLSAPAGGFSFDNCARNSLLEAELAQKGLRVPAPRKTGTTIAGIVFKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTEMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIHPHGSTDKLPYVTMGSGSLAAMAVFEDKYKPDMEEEEAKQLVRDAIAAGIYNDLGSGSNVDICVISKNKLDFIRPYDVANKKGDRFGRYKCAKGTTAVLTENVAHLELEVLDETVQTMDTS
SIO_010081: PSMB7
subclass of: SO_0000673
so part of: PSMB7
location: join(1112527..1112588,1112746..1112839,1112956..1113053,1113398..1113538,1114097..1114212,1120330..1120388,1131382..1131533,1132154..1132265)
location: region:1112527-1132265:1
so has part: feature:1112527-1112588:1:exon
so has part: feature:1112746-1112839:1:exon
so has part: feature:1112956-1113053:1:exon
so has part: feature:1113398-1113538:1:exon
so has part: feature:1114097-1114212:1:exon
so has part: feature:1120330-1120388:1:exon
so has part: feature:1131382-1131533:1:exon
so has part: feature:1132154-1132265:1:exon

XP_032563890.1
type: Protein
SIO_000068: ncbiprotein

position:1112527:1
position: 1112527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1132265:1
position: 1132265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1112527-1112588:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1112746-1112839:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1112956-1113053:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1113398-1113538:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1114097-1114212:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1120330-1120388:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1131382-1131533:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1132154-1132265:1:exon

NEK6
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: NEK6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1133199..1178427)
location: region:1133199-1178427:-1
so has part: feature:1133199-1178427:-1:exon
subclass of: SO_0000010

116796967
type: Gene
SIO_000068: ncbigene

position:1133199:-1
position: 1133199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1178427:-1
position: 1178427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1133199-1178427:-1:exon

NEK6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: NEK6
product: NIMA related kinase 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 9 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032707998.1
SIO_010081: NEK6
subclass of: SO_0000673
so part of: NEK6
location: complement(join(1133199..1135264,1137969..1138082,1141749..1141843,1148148..1148255,1149488..1149596,1152884..1152994,1153564..1153626,1154567..1154707,1162133..1162254,1178407..1178427))
location: region:1133199-1178427:-1
so has part: feature:1178407-1178427:-1:exon
so has part: feature:1162133-1162254:-1:exon
so has part: feature:1154567-1154707:-1:exon
so has part: feature:1153564-1153626:-1:exon
so has part: feature:1152884-1152994:-1:exon
so has part: feature:1149488-1149596:-1:exon
so has part: feature:1148148-1148255:-1:exon
so has part: feature:1141749-1141843:-1:exon
so has part: feature:1137969-1138082:-1:exon
so has part: feature:1133199-1135264:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1178407-1178427:-1:exon

position:1178407:-1
position: 1178407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1162133-1162254:-1:exon

position:1162133:-1
position: 1162133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1162254:-1
position: 1162254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1154567-1154707:-1:exon

position:1154567:-1
position: 1154567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1154707:-1
position: 1154707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1153564-1153626:-1:exon

position:1153564:-1
position: 1153564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1153626:-1
position: 1153626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1152884-1152994:-1:exon

position:1152884:-1
position: 1152884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1152994:-1
position: 1152994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1149488-1149596:-1:exon

position:1149488:-1
position: 1149488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1149596:-1
position: 1149596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1148148-1148255:-1:exon

position:1148148:-1
position: 1148148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1148255:-1
position: 1148255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1141749-1141843:-1:exon

position:1141749:-1
position: 1141749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1141843:-1
position: 1141843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1137969-1138082:-1:exon

position:1137969:-1
position: 1137969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1138082:-1
position: 1138082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1133199-1135264:-1:exon

position:1135264:-1
position: 1135264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NEK6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: NEK6
product: NIMA related kinase 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 12 long SRA reads, 18 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_032707996.1
SIO_010081: NEK6
subclass of: SO_0000673
so part of: NEK6
location: complement(join(1133199..1135264,1137969..1138082,1141749..1141843,1148148..1148255,1149488..1149596,1152884..1152994,1153564..1153626,1154567..1154707,1162133..1162254,1177628..1177810))
location: region:1133199-1177810:-1
so has part: feature:1177628-1177810:-1:exon
so has part: feature:1162133-1162254:-1:exon
so has part: feature:1154567-1154707:-1:exon
so has part: feature:1153564-1153626:-1:exon
so has part: feature:1152884-1152994:-1:exon
so has part: feature:1149488-1149596:-1:exon
so has part: feature:1148148-1148255:-1:exon
so has part: feature:1141749-1141843:-1:exon
so has part: feature:1137969-1138082:-1:exon
so has part: feature:1133199-1135264:-1:exon

position:1177810:-1
position: 1177810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1177628-1177810:-1:exon

position:1177628:-1
position: 1177628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1162133-1162254:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1154567-1154707:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1153564-1153626:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1152884-1152994:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1149488-1149596:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1148148-1148255:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1141749-1141843:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1137969-1138082:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1133199-1135264:-1:exon

NEK6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: NEK6
product: NIMA related kinase 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 11 long SRA reads, 17 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_032707997.1
SIO_010081: NEK6
subclass of: SO_0000673
so part of: NEK6
location: complement(join(1133199..1135264,1137969..1138082,1141749..1141843,1148148..1148255,1149488..1149596,1152884..1152994,1153564..1153626,1154567..1154707,1162133..1162257,1177628..1177809))
location: region:1133199-1177809:-1
so has part: feature:1177628-1177809:-1:exon
so has part: feature:1162133-1162257:-1:exon
so has part: feature:1154567-1154707:-1:exon
so has part: feature:1153564-1153626:-1:exon
so has part: feature:1152884-1152994:-1:exon
so has part: feature:1149488-1149596:-1:exon
so has part: feature:1148148-1148255:-1:exon
so has part: feature:1141749-1141843:-1:exon
so has part: feature:1137969-1138082:-1:exon
so has part: feature:1133199-1135264:-1:exon

position:1177809:-1
position: 1177809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1177628-1177809:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1162133-1162257:-1:exon

position:1162257:-1
position: 1162257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1154567-1154707:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1153564-1153626:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1152884-1152994:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1149488-1149596:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1148148-1148255:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1141749-1141843:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1137969-1138082:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1133199-1135264:-1:exon

NEK6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: NEK6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Nek6
translation: MEGQHNHPHHLGDQNNPLCKLPGQEFQHDPQRQLTAFPYRCTLADFQVEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCIKEIDLLKQLNHPNIIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPAEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMHVWTSST
SIO_010081: NEK6
subclass of: SO_0000673
so part of: NEK6
location: complement(join(1135154..1135264,1137969..1138082,1141749..1141843,1148148..1148255,1149488..1149596,1152884..1152994,1153564..1153626,1154567..1154707,1162133..1162225))
location: region:1135154-1162225:-1
so has part: feature:1162133-1162225:-1:exon
so has part: feature:1154567-1154707:-1:exon
so has part: feature:1153564-1153626:-1:exon
so has part: feature:1152884-1152994:-1:exon
so has part: feature:1149488-1149596:-1:exon
so has part: feature:1148148-1148255:-1:exon
so has part: feature:1141749-1141843:-1:exon
so has part: feature:1137969-1138082:-1:exon
so has part: feature:1135154-1135264:-1:exon

XP_032563887.1
type: Protein
SIO_000068: ncbiprotein

position:1135154:-1
position: 1135154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1162225:-1
position: 1162225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1162133-1162225:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1154567-1154707:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1153564-1153626:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1152884-1152994:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1149488-1149596:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1148148-1148255:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1141749-1141843:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1137969-1138082:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1135154-1135264:-1:exon

NEK6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: NEK6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Nek6
translation: MEGQHNHPHHLGDQNNPLCKLPGQEFQHDPQRQLTAFPYRCTLADFQVEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCIKEIDLLKQLNHPNIIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPAEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMHVWTSST
SIO_010081: NEK6
subclass of: SO_0000673
so part of: NEK6
location: complement(join(1135154..1135264,1137969..1138082,1141749..1141843,1148148..1148255,1149488..1149596,1152884..1152994,1153564..1153626,1154567..1154707,1162133..1162225))
location: region:1135154-1162225:-1
so has part: feature:1162133-1162225:-1:exon
so has part: feature:1154567-1154707:-1:exon
so has part: feature:1153564-1153626:-1:exon
so has part: feature:1152884-1152994:-1:exon
so has part: feature:1149488-1149596:-1:exon
so has part: feature:1148148-1148255:-1:exon
so has part: feature:1141749-1141843:-1:exon
so has part: feature:1137969-1138082:-1:exon
so has part: feature:1135154-1135264:-1:exon

XP_032563888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1162133-1162225:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1154567-1154707:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1153564-1153626:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1152884-1152994:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1149488-1149596:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1148148-1148255:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1141749-1141843:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1137969-1138082:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1135154-1135264:-1:exon

NEK6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: NEK6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Nek6
translation: MEGQHNHPHHLGDQNNPLCKLPGQEFQHDPQRQLTAFPYRCTLADFQVEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCIKEIDLLKQLNHPNIIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPAEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMHVWTSST
SIO_010081: NEK6
subclass of: SO_0000673
so part of: NEK6
location: complement(join(1135154..1135264,1137969..1138082,1141749..1141843,1148148..1148255,1149488..1149596,1152884..1152994,1153564..1153626,1154567..1154707,1162133..1162225))
location: region:1135154-1162225:-1
so has part: feature:1162133-1162225:-1:exon
so has part: feature:1154567-1154707:-1:exon
so has part: feature:1153564-1153626:-1:exon
so has part: feature:1152884-1152994:-1:exon
so has part: feature:1149488-1149596:-1:exon
so has part: feature:1148148-1148255:-1:exon
so has part: feature:1141749-1141843:-1:exon
so has part: feature:1137969-1138082:-1:exon
so has part: feature:1135154-1135264:-1:exon

XP_032563889.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1162133-1162225:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1154567-1154707:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1153564-1153626:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1152884-1152994:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1149488-1149596:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1148148-1148255:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1141749-1141843:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1137969-1138082:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1135154-1135264:-1:exon

LHX2
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LHX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1271440..1319926)
location: region:1271440-1319926:-1
so has part: feature:1271440-1319926:-1:exon
subclass of: SO_0000010

116797203
type: Gene
SIO_000068: ncbigene

position:1271440:-1
position: 1271440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1319926:-1
position: 1319926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1271440-1319926:-1:exon

LHX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LHX2
product: LIM homeobox 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032708546.1
SIO_010081: LHX2
subclass of: SO_0000673
so part of: LHX2
location: complement(join(1271440..1272240,1278862..1279067,1287481..1287863,1288442..1288647,1319237..1319689,1319821..1319926))
location: region:1271440-1319926:-1
so has part: feature:1319821-1319926:-1:exon
so has part: feature:1319237-1319689:-1:exon
so has part: feature:1288442-1288647:-1:exon
so has part: feature:1287481-1287863:-1:exon
so has part: feature:1278862-1279067:-1:exon
so has part: feature:1271440-1272240:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1319821-1319926:-1:exon

position:1319821:-1
position: 1319821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1319237-1319689:-1:exon

position:1319237:-1
position: 1319237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1319689:-1
position: 1319689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1288442-1288647:-1:exon

position:1288442:-1
position: 1288442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1288647:-1
position: 1288647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1287481-1287863:-1:exon

position:1287481:-1
position: 1287481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1287863:-1
position: 1287863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1278862-1279067:-1:exon

position:1278862:-1
position: 1278862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1279067:-1
position: 1279067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1271440-1272240:-1:exon

position:1272240:-1
position: 1272240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LHX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LHX2
product: LIM homeobox 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032708547.1
SIO_010081: LHX2
subclass of: SO_0000673
so part of: LHX2
location: complement(join(1271440..1272240,1278862..1279067,1287481..1287863,1288442..1288647,1319237..1319706))
location: region:1271440-1319706:-1
so has part: feature:1319237-1319706:-1:exon
so has part: feature:1288442-1288647:-1:exon
so has part: feature:1287481-1287863:-1:exon
so has part: feature:1278862-1279067:-1:exon
so has part: feature:1271440-1272240:-1:exon

position:1319706:-1
position: 1319706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1319237-1319706:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1288442-1288647:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1287481-1287863:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1278862-1279067:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1271440-1272240:-1:exon

LHX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LHX2
product: LIM homeobox 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032708549.1
SIO_010081: LHX2
subclass of: SO_0000673
so part of: LHX2
location: complement(join(1271440..1272240,1278862..1279067,1287481..1287863,1288442..1288650,1319244..1319330))
location: region:1271440-1319330:-1
so has part: feature:1319244-1319330:-1:exon
so has part: feature:1288442-1288650:-1:exon
so has part: feature:1287481-1287863:-1:exon
so has part: feature:1278862-1279067:-1:exon
so has part: feature:1271440-1272240:-1:exon

position:1319330:-1
position: 1319330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1319244-1319330:-1:exon

position:1319244:-1
position: 1319244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1288442-1288650:-1:exon

position:1288650:-1
position: 1288650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1287481-1287863:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1278862-1279067:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1271440-1272240:-1:exon

LHX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LHX2
product: LIM homeobox 2, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032708553.1
SIO_010081: LHX2
subclass of: SO_0000673
so part of: LHX2
location: complement(join(1271440..1272240,1278862..1279067,1287481..1287863,1288442..1288644,1302817..1302938))
location: region:1271440-1302938:-1
so has part: feature:1302817-1302938:-1:exon
so has part: feature:1288442-1288644:-1:exon
so has part: feature:1287481-1287863:-1:exon
so has part: feature:1278862-1279067:-1:exon
so has part: feature:1271440-1272240:-1:exon

position:1302938:-1
position: 1302938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1302817-1302938:-1:exon

position:1302817:-1
position: 1302817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1288442-1288644:-1:exon

position:1288644:-1
position: 1288644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1287481-1287863:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1278862-1279067:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1271440-1272240:-1:exon

LHX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LHX2
product: LIM homeobox 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032708550.1
SIO_010081: LHX2
subclass of: SO_0000673
so part of: LHX2
location: complement(join(1271440..1272240,1278862..1279067,1287481..1287863,1288442..1288647,1302817..1302938))
location: region:1271440-1302938:-1
so has part: feature:1302817-1302938:-1:exon
so has part: feature:1288442-1288647:-1:exon
so has part: feature:1287481-1287863:-1:exon
so has part: feature:1278862-1279067:-1:exon
so has part: feature:1271440-1272240:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1302817-1302938:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1288442-1288647:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1287481-1287863:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1278862-1279067:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1271440-1272240:-1:exon

LHX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LHX2
product: LIM homeobox 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032708545.1
SIO_010081: LHX2
subclass of: SO_0000673
so part of: LHX2
location: complement(join(1271440..1272240,1278862..1279067,1287481..1287863,1288442..1288644,1291439..1292196))
location: region:1271440-1292196:-1
so has part: feature:1291439-1292196:-1:exon
so has part: feature:1288442-1288644:-1:exon
so has part: feature:1287481-1287863:-1:exon
so has part: feature:1278862-1279067:-1:exon
so has part: feature:1271440-1272240:-1:exon

position:1292196:-1
position: 1292196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1291439-1292196:-1:exon

position:1291439:-1
position: 1291439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1288442-1288644:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1287481-1287863:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1278862-1279067:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1271440-1272240:-1:exon

LHX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LHX2
product: LIM homeobox 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 10 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032708543.1
SIO_010081: LHX2
subclass of: SO_0000673
so part of: LHX2
location: complement(join(1271440..1272240,1278862..1279067,1287481..1287863,1288442..1288647,1291439..1292196))
location: region:1271440-1292196:-1
so has part: feature:1291439-1292196:-1:exon
so has part: feature:1288442-1288647:-1:exon
so has part: feature:1287481-1287863:-1:exon
so has part: feature:1278862-1279067:-1:exon
so has part: feature:1271440-1272240:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1291439-1292196:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1288442-1288647:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1287481-1287863:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1278862-1279067:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1271440-1272240:-1:exon

LHX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LHX2
product: LIM homeobox 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032708551.1
SIO_010081: LHX2
subclass of: SO_0000673
so part of: LHX2
location: complement(join(1271440..1272240,1278862..1279067,1287481..1287863,1288442..1288647,1290993..1291335))
location: region:1271440-1291335:-1
so has part: feature:1290993-1291335:-1:exon
so has part: feature:1288442-1288647:-1:exon
so has part: feature:1287481-1287863:-1:exon
so has part: feature:1278862-1279067:-1:exon
so has part: feature:1271440-1272240:-1:exon

position:1291335:-1
position: 1291335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1290993-1291335:-1:exon

position:1290993:-1
position: 1290993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1288442-1288647:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1287481-1287863:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1278862-1279067:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1271440-1272240:-1:exon

LHX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LHX2
product: LIM homeobox 2, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032708552.1
SIO_010081: LHX2
subclass of: SO_0000673
so part of: LHX2
location: complement(join(1271440..1272240,1278862..1279067,1287481..1287863,1288442..1288647,1290496..1290515))
location: region:1271440-1290515:-1
so has part: feature:1290496-1290515:-1:exon
so has part: feature:1288442-1288647:-1:exon
so has part: feature:1287481-1287863:-1:exon
so has part: feature:1278862-1279067:-1:exon
so has part: feature:1271440-1272240:-1:exon

position:1290515:-1
position: 1290515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1290496-1290515:-1:exon

position:1290496:-1
position: 1290496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1288442-1288647:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1287481-1287863:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1278862-1279067:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1271440-1272240:-1:exon

LHX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LHX2
product: LIM homeobox 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032708548.1
SIO_010081: LHX2
subclass of: SO_0000673
so part of: LHX2
location: complement(join(1271440..1272240,1278862..1279067,1287481..1287863,1288442..1288647,1289668..1289766))
location: region:1271440-1289766:-1
so has part: feature:1289668-1289766:-1:exon
so has part: feature:1288442-1288647:-1:exon
so has part: feature:1287481-1287863:-1:exon
so has part: feature:1278862-1279067:-1:exon
so has part: feature:1271440-1272240:-1:exon

position:1289766:-1
position: 1289766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1289668-1289766:-1:exon

position:1289668:-1
position: 1289668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1288442-1288647:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1287481-1287863:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1278862-1279067:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1271440-1272240:-1:exon

LHX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LHX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM/homeobox protein Lhx2 isoform X3
translation: MQSAGNTARVDSKTTDRQLVLELANKNKQQTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDNLVYCRLHFETLIQGEYQVHFNHSDVAAGKGPALGAGSANTLGLPYYNGVGTVQKGRPRKRKSPGPGADLAAYNAALSCNENDGDHLDRDQQYPSNQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLRQENTGVDKTSDSTLQAGTPSGPASEISNASMSPSSTPTTLTDLTNPTMPTVTSVLTSVPGSLEVHESRSPSQTTLTNLF
SIO_010081: LHX2
subclass of: SO_0000673
so part of: LHX2
location: complement(join(1271953..1272240,1278862..1279067,1287481..1287863,1288442..1288647,1319237..1319323))
location: region:1271953-1319323:-1
so has part: feature:1319237-1319323:-1:exon
so has part: feature:1288442-1288647:-1:exon
so has part: feature:1287481-1287863:-1:exon
so has part: feature:1278862-1279067:-1:exon
so has part: feature:1271953-1272240:-1:exon

XP_032564437.1
type: Protein
SIO_000068: ncbiprotein

position:1271953:-1
position: 1271953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1319323:-1
position: 1319323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1319237-1319323:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1288442-1288647:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1287481-1287863:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1278862-1279067:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1271953-1272240:-1:exon

LHX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LHX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM/homeobox protein Lhx2 isoform X3
translation: MQSAGNTARVDSKTTDRQLVLELANKNKQQTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDNLVYCRLHFETLIQGEYQVHFNHSDVAAGKGPALGAGSANTLGLPYYNGVGTVQKGRPRKRKSPGPGADLAAYNAALSCNENDGDHLDRDQQYPSNQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLRQENTGVDKTSDSTLQAGTPSGPASEISNASMSPSSTPTTLTDLTNPTMPTVTSVLTSVPGSLEVHESRSPSQTTLTNLF
SIO_010081: LHX2
subclass of: SO_0000673
so part of: LHX2
location: complement(join(1271953..1272240,1278862..1279067,1287481..1287863,1288442..1288647,1319237..1319323))
location: region:1271953-1319323:-1
so has part: feature:1319237-1319323:-1:exon
so has part: feature:1288442-1288647:-1:exon
so has part: feature:1287481-1287863:-1:exon
so has part: feature:1278862-1279067:-1:exon
so has part: feature:1271953-1272240:-1:exon

XP_032564438.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1319237-1319323:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1288442-1288647:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1287481-1287863:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1278862-1279067:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1271953-1272240:-1:exon

LHX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LHX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM/homeobox protein Lhx2 isoform X2
translation: MHGGGLRLMQVLGSCRDPDNCQQQQQLGPSSSASSAMLFHSLSGSEMHGVIDEMDRRTKSEAPAISSAIDRGETETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDNLVYCRLHFETLIQGEYQVHFNHSDVAAGKGPALGAGSANTLGLPYYNGVGTVQKGRPRKRKSPGPGADLAAYNAALSCNENDGDHLDRDQQYPSNQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLRQENTGVDKTSDSTLQAGTPSGPASEISNASMSPSSTPTTLTDLTNPTMPTVTSVLTSVPGSLEVHESRSPSQTTLTNLF
SIO_010081: LHX2
subclass of: SO_0000673
so part of: LHX2
location: complement(join(1271953..1272240,1278862..1279067,1287481..1287863,1288442..1288644,1291439..1291666))
location: region:1271953-1291666:-1
so has part: feature:1291439-1291666:-1:exon
so has part: feature:1288442-1288644:-1:exon
so has part: feature:1287481-1287863:-1:exon
so has part: feature:1278862-1279067:-1:exon
so has part: feature:1271953-1272240:-1:exon

XP_032564436.1
type: Protein
SIO_000068: ncbiprotein

position:1291666:-1
position: 1291666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1291439-1291666:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1288442-1288644:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1287481-1287863:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1278862-1279067:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1271953-1272240:-1:exon

LHX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LHX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM/homeobox protein Lhx2 isoform X1
translation: MHGGGLRLMQVLGSCRDPDNCQQQQQLGPSSSASSAMLFHSLSGSEMHGVIDEMDRRTKSEAPAISSAIDRGETETQTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDNLVYCRLHFETLIQGEYQVHFNHSDVAAGKGPALGAGSANTLGLPYYNGVGTVQKGRPRKRKSPGPGADLAAYNAALSCNENDGDHLDRDQQYPSNQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLRQENTGVDKTSDSTLQAGTPSGPASEISNASMSPSSTPTTLTDLTNPTMPTVTSVLTSVPGSLEVHESRSPSQTTLTNLF
SIO_010081: LHX2
subclass of: SO_0000673
so part of: LHX2
location: complement(join(1271953..1272240,1278862..1279067,1287481..1287863,1288442..1288647,1291439..1291666))
location: region:1271953-1291666:-1
so has part: feature:1291439-1291666:-1:exon
so has part: feature:1288442-1288647:-1:exon
so has part: feature:1287481-1287863:-1:exon
so has part: feature:1278862-1279067:-1:exon
so has part: feature:1271953-1272240:-1:exon

XP_032564434.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1291439-1291666:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1288442-1288647:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1287481-1287863:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1278862-1279067:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1271953-1272240:-1:exon

LHX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LHX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM/homeobox protein Lhx2 isoform X4
translation: MFRVLLHKNGSAVGFCAKRQTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDNLVYCRLHFETLIQGEYQVHFNHSDVAAGKGPALGAGSANTLGLPYYNGVGTVQKGRPRKRKSPGPGADLAAYNAALSCNENDGDHLDRDQQYPSNQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLRQENTGVDKTSDSTLQAGTPSGPASEISNASMSPSSTPTTLTDLTNPTMPTVTSVLTSVPGSLEVHESRSPSQTTLTNLF
SIO_010081: LHX2
subclass of: SO_0000673
so part of: LHX2
location: complement(join(1271953..1272240,1278862..1279067,1287481..1287863,1288442..1288647,1289668..1289724))
location: region:1271953-1289724:-1
so has part: feature:1289668-1289724:-1:exon
so has part: feature:1288442-1288647:-1:exon
so has part: feature:1287481-1287863:-1:exon
so has part: feature:1278862-1279067:-1:exon
so has part: feature:1271953-1272240:-1:exon

XP_032564439.1
type: Protein
SIO_000068: ncbiprotein

position:1289724:-1
position: 1289724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1289668-1289724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1288442-1288647:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1287481-1287863:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1278862-1279067:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1271953-1272240:-1:exon

LHX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LHX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM/homeobox protein Lhx2 isoform X5
translation: MPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDNLVYCRLHFETLIQGEYQVHFNHSDVAAGKGPALGAGSANTLGLPYYNGVGTVQKGRPRKRKSPGPGADLAAYNAALSCNENDGDHLDRDQQYPSNQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLRQENTGVDKTSDSTLQAGTPSGPASEISNASMSPSSTPTTLTDLTNPTMPTVTSVLTSVPGSLEVHESRSPSQTTLTNLF
SIO_010081: LHX2
subclass of: SO_0000673
so part of: LHX2
location: complement(join(1271953..1272240,1278862..1279067,1287481..1287863,1288442..1288641))
location: region:1271953-1288641:-1
so has part: feature:1288442-1288641:-1:exon
so has part: feature:1287481-1287863:-1:exon
so has part: feature:1278862-1279067:-1:exon
so has part: feature:1271953-1272240:-1:exon

XP_032564440.1
type: Protein
SIO_000068: ncbiprotein

position:1288641:-1
position: 1288641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1288442-1288641:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1287481-1287863:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1278862-1279067:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1271953-1272240:-1:exon

LHX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LHX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM/homeobox protein Lhx2 isoform X5
translation: MPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDNLVYCRLHFETLIQGEYQVHFNHSDVAAGKGPALGAGSANTLGLPYYNGVGTVQKGRPRKRKSPGPGADLAAYNAALSCNENDGDHLDRDQQYPSNQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLRQENTGVDKTSDSTLQAGTPSGPASEISNASMSPSSTPTTLTDLTNPTMPTVTSVLTSVPGSLEVHESRSPSQTTLTNLF
SIO_010081: LHX2
subclass of: SO_0000673
so part of: LHX2
location: complement(join(1271953..1272240,1278862..1279067,1287481..1287863,1288442..1288641))
location: region:1271953-1288641:-1
so has part: feature:1288442-1288641:-1:exon
so has part: feature:1287481-1287863:-1:exon
so has part: feature:1278862-1279067:-1:exon
so has part: feature:1271953-1272240:-1:exon

XP_032564441.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1288442-1288641:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1287481-1287863:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1278862-1279067:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1271953-1272240:-1:exon

LHX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LHX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM/homeobox protein Lhx2 isoform X5
translation: MPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDNLVYCRLHFETLIQGEYQVHFNHSDVAAGKGPALGAGSANTLGLPYYNGVGTVQKGRPRKRKSPGPGADLAAYNAALSCNENDGDHLDRDQQYPSNQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLRQENTGVDKTSDSTLQAGTPSGPASEISNASMSPSSTPTTLTDLTNPTMPTVTSVLTSVPGSLEVHESRSPSQTTLTNLF
SIO_010081: LHX2
subclass of: SO_0000673
so part of: LHX2
location: complement(join(1271953..1272240,1278862..1279067,1287481..1287863,1288442..1288641))
location: region:1271953-1288641:-1
so has part: feature:1288442-1288641:-1:exon
so has part: feature:1287481-1287863:-1:exon
so has part: feature:1278862-1279067:-1:exon
so has part: feature:1271953-1272240:-1:exon

XP_032564442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1288442-1288641:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1287481-1287863:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1278862-1279067:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1271953-1272240:-1:exon

LHX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LHX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM/homeobox protein Lhx2 isoform X5
translation: MPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDNLVYCRLHFETLIQGEYQVHFNHSDVAAGKGPALGAGSANTLGLPYYNGVGTVQKGRPRKRKSPGPGADLAAYNAALSCNENDGDHLDRDQQYPSNQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLRQENTGVDKTSDSTLQAGTPSGPASEISNASMSPSSTPTTLTDLTNPTMPTVTSVLTSVPGSLEVHESRSPSQTTLTNLF
SIO_010081: LHX2
subclass of: SO_0000673
so part of: LHX2
location: complement(join(1271953..1272240,1278862..1279067,1287481..1287863,1288442..1288641))
location: region:1271953-1288641:-1
so has part: feature:1288442-1288641:-1:exon
so has part: feature:1287481-1287863:-1:exon
so has part: feature:1278862-1279067:-1:exon
so has part: feature:1271953-1272240:-1:exon

XP_032564443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1288442-1288641:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1287481-1287863:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1278862-1279067:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1271953-1272240:-1:exon

LHX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LHX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM/homeobox protein Lhx2 isoform X5
translation: MPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDNLVYCRLHFETLIQGEYQVHFNHSDVAAGKGPALGAGSANTLGLPYYNGVGTVQKGRPRKRKSPGPGADLAAYNAALSCNENDGDHLDRDQQYPSNQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLRQENTGVDKTSDSTLQAGTPSGPASEISNASMSPSSTPTTLTDLTNPTMPTVTSVLTSVPGSLEVHESRSPSQTTLTNLF
SIO_010081: LHX2
subclass of: SO_0000673
so part of: LHX2
location: complement(join(1271953..1272240,1278862..1279067,1287481..1287863,1288442..1288641))
location: region:1271953-1288641:-1
so has part: feature:1288442-1288641:-1:exon
so has part: feature:1287481-1287863:-1:exon
so has part: feature:1278862-1279067:-1:exon
so has part: feature:1271953-1272240:-1:exon

XP_032564444.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1288442-1288641:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1287481-1287863:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1278862-1279067:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1271953-1272240:-1:exon

DENND1A
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: DENND1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1320420..1476353
location: region:1320420-1476353:1
so has part: feature:1320420-1476353:1:exon
subclass of: SO_0000010

116797243
type: Gene
SIO_000068: ncbigene

position:1320420:1
position: 1320420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1476353:1
position: 1476353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1320420-1476353:1:exon

DENND1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: DENND1A
product: DENN domain containing 1A
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 10 bases in 6 codons; deleted 7 bases in 6 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 long SRA read, 6 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032708612.1
SIO_010081: DENND1A
subclass of: SO_0000673
so part of: DENND1A
location: join(1320420..1320553,1326540..1326610,1349860..1349903,1365929..1365978,1368762..1368881,1388913..1388982,1389454..1389534,1390811..1390864,1394349..1394459,1400009..1400109,1405425..1405470,1413975..1414076,1419590..1419715,1443004..1443105,1443875..1443962,1444495..1444535,1445984..1446055,1447093..1447149,1452110..1452241,1466391..1466479,1470958..1471086,1473035..1473293,1473503..1476353)
location: region:1320420-1476353:1
so has part: feature:1320420-1320553:1:exon
so has part: feature:1326540-1326610:1:exon
so has part: feature:1349860-1349903:1:exon
so has part: feature:1365929-1365978:1:exon
so has part: feature:1368762-1368881:1:exon
so has part: feature:1388913-1388982:1:exon
so has part: feature:1389454-1389534:1:exon
so has part: feature:1390811-1390864:1:exon
so has part: feature:1394349-1394459:1:exon
so has part: feature:1400009-1400109:1:exon
so has part: feature:1405425-1405470:1:exon
so has part: feature:1413975-1414076:1:exon
so has part: feature:1419590-1419715:1:exon
so has part: feature:1443004-1443105:1:exon
so has part: feature:1443875-1443962:1:exon
so has part: feature:1444495-1444535:1:exon
so has part: feature:1445984-1446055:1:exon
so has part: feature:1447093-1447149:1:exon
so has part: feature:1452110-1452241:1:exon
so has part: feature:1466391-1466479:1:exon
so has part: feature:1470958-1471086:1:exon
so has part: feature:1473035-1473293:1:exon
so has part: feature:1473503-1476353:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1320420-1320553:1:exon

position:1320553:1
position: 1320553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1326540-1326610:1:exon

position:1326540:1
position: 1326540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1326610:1
position: 1326610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1349860-1349903:1:exon

position:1349860:1
position: 1349860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1349903:1
position: 1349903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1365929-1365978:1:exon

position:1365929:1
position: 1365929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1365978:1
position: 1365978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1368762-1368881:1:exon

position:1368762:1
position: 1368762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1368881:1
position: 1368881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1388913-1388982:1:exon

position:1388913:1
position: 1388913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1388982:1
position: 1388982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1389454-1389534:1:exon

position:1389454:1
position: 1389454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1389534:1
position: 1389534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1390811-1390864:1:exon

position:1390811:1
position: 1390811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1390864:1
position: 1390864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1394349-1394459:1:exon

position:1394349:1
position: 1394349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1394459:1
position: 1394459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1400009-1400109:1:exon

position:1400009:1
position: 1400009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1400109:1
position: 1400109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1405425-1405470:1:exon

position:1405425:1
position: 1405425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1405470:1
position: 1405470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1413975-1414076:1:exon

position:1413975:1
position: 1413975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1414076:1
position: 1414076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1419590-1419715:1:exon

position:1419590:1
position: 1419590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1419715:1
position: 1419715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1443004-1443105:1:exon

position:1443004:1
position: 1443004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1443105:1
position: 1443105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1443875-1443962:1:exon

position:1443875:1
position: 1443875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1443962:1
position: 1443962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1444495-1444535:1:exon

position:1444495:1
position: 1444495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1444535:1
position: 1444535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1445984-1446055:1:exon

position:1445984:1
position: 1445984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1446055:1
position: 1446055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1447093-1447149:1:exon

position:1447093:1
position: 1447093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1447149:1
position: 1447149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1452110-1452241:1:exon

position:1452110:1
position: 1452110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1452241:1
position: 1452241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1466391-1466479:1:exon

position:1466391:1
position: 1466391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1466479:1
position: 1466479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1470958-1471086:1:exon

position:1470958:1
position: 1470958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1471086:1
position: 1471086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1473035-1473293:1:exon

position:1473035:1
position: 1473035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1473293:1
position: 1473293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1473503-1476353:1:exon

position:1473503:1
position: 1473503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DENND1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: DENND1A
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 10 bases in 6 codons; deleted 7 bases in 6 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: DENN domain-containing protein 1A
translation: MGSRIKQNPETTFEVYAEVTHSGISCIGKDPEVRRQFPEGYSDQEVLQTLTKFCFPFYVDSHAVNQVGQNFTFVLTDIDSKQRFGFCRLSSGAKSCFCILSYLPWFEVFYKLLNVLADYSAKGQDSQRSELLETFHKLTIPEPGTSVHLGVHSYFTVPDTRELPSIPENRNLTEYFVAVDVNNMLHLYASMLYERRILICCSKLSTLTACIHGSAAMLYPMFWQHVYIPVLPPHLLDYCCAPMPYLIGIHLSLMEKVRSMALEDVVILNVDTNTLETPFDDLQSLPNDVVSALKNRLKKVSTTTGDGVARAFLKAQAAFFGSYRNALKIEPGEPITFCEEAFVSHRSAVMRQFLQNAIQLQLFKQFIDGRLDLLNSGEGFSDVFEEEINAGEYAGSDKLYHQWLSTVRKGSGAILNTVKTKANPAMKTVYKFAKDHAKMGIKEVKNRLKQKDIAENGCSAVPEESLPRTAPSPLGEKKDPKLREDRRPITVHFGQVRPPRPHVSRDPRATSEVEGRRTSVPSPEHLVKPMRHYTVFLSEDSSDDEFQQEEDPVSGFSENFFFSAPFEWPQPYRALKESDSADGEEGAGQPERPREPLPPSPLLASTATDINSCRTXLPNLEVESQPQPLSQAKSLEDLRVPTEEVEQRCTFDYQRMDLGVSERSRIVPTMKLSHPYNKLWSMGHDDMAIPXKYSQSSPEKSLSALGNVPPVTRRPRNRDSGLTPAAKDESNPAIQGNITIPRPQGRKTPELGIVPPPXSTRASKHQTAAGSGETLPTPSRVSDLIPEPFGADHVSLEPEMQQSGNTALTHLSCCPAMAXRCEMLQPVKVQAEGAGNDSDFLLDLLDPLRTAGWRPGPRGPPSLHSPAPTAAFGLGGSDFVPPPAAPFVQPLGYPSPAPPPFLQASPNPFNQTLPGALPVSLVRTHEGLLHPSLGHAYSSSFITPVASXPPQRPQPNLSTLSMPNLFSQAPAVPAAGSLLLQSPSAASSLQAACPSGPPKPPTLQVGQASTKVDSKQALALLANEXPLFPARPTKGLEAVLLASKSEETKDPFEDLLKKTKQDVSPTPGKVEQLRKRWETFE
SIO_010081: DENND1A
subclass of: SO_0000673
so part of: DENND1A
location: join(1320537..1320553,1326540..1326610,1349860..1349903,1365929..1365978,1368762..1368881,1388913..1388982,1389454..1389534,1390811..1390864,1394349..1394459,1400009..1400109,1405425..1405470,1413975..1414076,1419590..1419715,1443004..1443105,1443875..1443962,1444495..1444535,1445984..1446055,1447093..1447149,1452110..1452241,1466391..1466479,1470958..1471086,1473035..1473293,1473503..1474783)
location: region:1320537-1474783:1
so has part: feature:1320537-1320553:1:exon
so has part: feature:1326540-1326610:1:exon
so has part: feature:1349860-1349903:1:exon
so has part: feature:1365929-1365978:1:exon
so has part: feature:1368762-1368881:1:exon
so has part: feature:1388913-1388982:1:exon
so has part: feature:1389454-1389534:1:exon
so has part: feature:1390811-1390864:1:exon
so has part: feature:1394349-1394459:1:exon
so has part: feature:1400009-1400109:1:exon
so has part: feature:1405425-1405470:1:exon
so has part: feature:1413975-1414076:1:exon
so has part: feature:1419590-1419715:1:exon
so has part: feature:1443004-1443105:1:exon
so has part: feature:1443875-1443962:1:exon
so has part: feature:1444495-1444535:1:exon
so has part: feature:1445984-1446055:1:exon
so has part: feature:1447093-1447149:1:exon
so has part: feature:1452110-1452241:1:exon
so has part: feature:1466391-1466479:1:exon
so has part: feature:1470958-1471086:1:exon
so has part: feature:1473035-1473293:1:exon
so has part: feature:1473503-1474783:1:exon

XP_032564503.1
type: Protein
SIO_000068: ncbiprotein

position:1320537:1
position: 1320537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1474783:1
position: 1474783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1320537-1320553:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1326540-1326610:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1349860-1349903:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1365929-1365978:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1368762-1368881:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1388913-1388982:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1389454-1389534:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1390811-1390864:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1394349-1394459:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1400009-1400109:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1405425-1405470:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1413975-1414076:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1419590-1419715:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1443004-1443105:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1443875-1443962:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1444495-1444535:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1445984-1446055:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1447093-1447149:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1452110-1452241:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1466391-1466479:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1470958-1471086:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1473035-1473293:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1473503-1474783:1:exon

CRB2
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: CRB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1477207..1510691)
location: region:1477207-1510691:-1
so has part: feature:1477207-1510691:-1:exon
subclass of: SO_0000010

116797241
type: Gene
SIO_000068: ncbigene

position:1477207:-1
position: 1477207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1510691:-1
position: 1510691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1477207-1510691:-1:exon

CRB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: CRB2
product: crumbs cell polarity complex component 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032708605.1
SIO_010081: CRB2
subclass of: SO_0000673
so part of: CRB2
location: complement(join(1477207..1479851,1480924..1480936,1482765..1482891,1483334..1483450,1484286..1485153,1485638..1485803,1486082..1486638,1487425..1488372,1497189..1497302,1498190..1498372,1498578..1498717,1499094..1499289,1501354..1502052,1510596..1510691))
location: region:1477207-1510691:-1
so has part: feature:1510596-1510691:-1:exon
so has part: feature:1501354-1502052:-1:exon
so has part: feature:1499094-1499289:-1:exon
so has part: feature:1498578-1498717:-1:exon
so has part: feature:1498190-1498372:-1:exon
so has part: feature:1497189-1497302:-1:exon
so has part: feature:1487425-1488372:-1:exon
so has part: feature:1486082-1486638:-1:exon
so has part: feature:1485638-1485803:-1:exon
so has part: feature:1484286-1485153:-1:exon
so has part: feature:1483334-1483450:-1:exon
so has part: feature:1482765-1482891:-1:exon
so has part: feature:1480924-1480936:-1:exon
so has part: feature:1477207-1479851:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1510596-1510691:-1:exon

position:1510596:-1
position: 1510596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1501354-1502052:-1:exon

position:1501354:-1
position: 1501354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1502052:-1
position: 1502052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1499094-1499289:-1:exon

position:1499094:-1
position: 1499094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1499289:-1
position: 1499289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1498578-1498717:-1:exon

position:1498578:-1
position: 1498578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1498717:-1
position: 1498717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1498190-1498372:-1:exon

position:1498190:-1
position: 1498190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1498372:-1
position: 1498372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1497189-1497302:-1:exon

position:1497189:-1
position: 1497189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1497302:-1
position: 1497302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1487425-1488372:-1:exon

position:1487425:-1
position: 1487425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1488372:-1
position: 1488372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1486082-1486638:-1:exon

position:1486082:-1
position: 1486082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1486638:-1
position: 1486638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1485638-1485803:-1:exon

position:1485638:-1
position: 1485638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1485803:-1
position: 1485803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1484286-1485153:-1:exon

position:1484286:-1
position: 1484286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1485153:-1
position: 1485153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1483334-1483450:-1:exon

position:1483334:-1
position: 1483334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1483450:-1
position: 1483450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1482765-1482891:-1:exon

position:1482765:-1
position: 1482765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1482891:-1
position: 1482891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1480924-1480936:-1:exon

position:1480924:-1
position: 1480924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1480936:-1
position: 1480936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1477207-1479851:-1:exon

position:1479851:-1
position: 1479851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CRB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: CRB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein crumbs homolog 2 isoform X1
translation: MELKKSTSGACNAALLLPLFLLFWGTSYSENDSGCSSSPCENGGSCQDLEEGYQCTCPVEPVAYMGRNCELLYDACTKHDCPAHMSCTPTPGLLEYTCVCEPGPTGTACDHSDECESSPCTDPRWECVDRHSGYSCRCQPGPSGAGCHPESAQCSSQPCLNNGTCTEGTGGFSCLCPPGFSGATCEHDMDECASGPCRNGAICRDGPGEYSCFCVPGYQGYHCEIDIDECASRPCRHNATCLNHMDHYECRCPPGYTGVNCEVEIDECASEPCQNGALCSDHVGFYTCTCAPGYQGMHCEVDVDECESQPCQHNGTCQDLVNRYHCDCSDTGFEGDHCELDILECASNPCLNSATCLEGINHYSCACWPGYTGQDCEEDVDECETEPCHNGGECLERSNPAYYGTQPDFPSAFSPSQAAGFLCRCQPGFTGETCFTNIDECESQPCQNGGLCQDLVNGFLCHCLPGYSGVECAVNINECEEGPCKNGAVCEDGIADYFCHCAPGQDGTVWGGKNCSVKLTGCQTHDCQNEALCIPTYQAESHGHLCQCQPGFSDATCSTPTTFSFASRGYLLVELPGGNESGREAEGERLPSVSLRFRTTLPSAVLFYRGHGAEFLFLELWEGVLHAELKREDVGYPLLLQGPRVDDGQWHKVEVVVHSAVELRLWHDSCEAGVCLQSAPVLPGTAWSPRAFSSLYVGGAEDSVANNTRSQQGFVGCLEDLQVDAEAVLPADLPLGESSVVRPGCDRTEWCLSQPCLHGGLCVDLWATFRCDCARPYGGPACSHERPAATFGLENSTSFASFTLSDSLGADFNISFFLRSRKPHGLLLQIGNQTGPGLTIYLRDGQLRVEVPPTDTVTFAEDVVDGRRHLVALSFQGGTVGAQQWDTHVELGQLVAQPLPAGSEVFIGGHPDPDSAELWGGYFKGCLQDIQLNNHQIQFFQAENYSVPQEHNRTQTGNLVNGCISDDTCKSEPCQNGGRCIVTWNDFHCSCPANFTGKFCEERVWCESDPCPEATTCVDVVAGYVCLANATFSSNSAIEFTTKTSVTRTLSSLHMDFRTRDEDAVLLWAVEEVDSLQVAIRNSSLLVTIRSGNSIEGVTFQSPQPVTDGAWHSISVSMEEPAAPSSRWLLWLDGAGNVTLQGSAGNLDFLKNNVLVVLAENFTGCLGQVQIGGLYLPFPAPRPYPQPEQFLQAGGGPVPLGCAGADVCASSPCLHGGTCHDLFDAFRCACGAGWGGQRCQDNLDDCQPSPCVHGDCRDAVADFQCECFRGFIGKRCDINVDDCVRHQCLNGATCVDGVYGYSCKCPPQFSGPRCEWPFPPQQCGKNFTCLNGGRCVTESWGANCSCRPGFTGRNCQININECEPNPCQNGGTCQDSENRYECVCSASYTGERCDINKGTPAASVGSPQPLLRGGSRGGGGGCPAPGGVGSHGHRHEEEESDAGHLQPQPAGEGRGSSGNVERHQDAPDRAAHLSPGHHGRVSCESLGAAAAPLCVQDRPGSKAAPPLRLLPLQLIPHTARVKLLGAGAAGGGNDPLWRGWGGEGGRGPRPRDRSRCCHSQGPWAPTGAVTALQATEAPTGAVTALQATEKTPYK
SIO_010081: CRB2
subclass of: SO_0000673
so part of: CRB2
location: complement(join(1479268..1479851,1480924..1480936,1482765..1482891,1483334..1483450,1484286..1485153,1485638..1485803,1486082..1486638,1487425..1488372,1497189..1497302,1498190..1498372,1498578..1498717,1499094..1499289,1501354..1502052,1510596..1510668))
location: region:1479268-1510668:-1
so has part: feature:1510596-1510668:-1:exon
so has part: feature:1501354-1502052:-1:exon
so has part: feature:1499094-1499289:-1:exon
so has part: feature:1498578-1498717:-1:exon
so has part: feature:1498190-1498372:-1:exon
so has part: feature:1497189-1497302:-1:exon
so has part: feature:1487425-1488372:-1:exon
so has part: feature:1486082-1486638:-1:exon
so has part: feature:1485638-1485803:-1:exon
so has part: feature:1484286-1485153:-1:exon
so has part: feature:1483334-1483450:-1:exon
so has part: feature:1482765-1482891:-1:exon
so has part: feature:1480924-1480936:-1:exon
so has part: feature:1479268-1479851:-1:exon

XP_032564496.1
type: Protein
SIO_000068: ncbiprotein

position:1479268:-1
position: 1479268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1510668:-1
position: 1510668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1510596-1510668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1501354-1502052:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1499094-1499289:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1498578-1498717:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1498190-1498372:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1497189-1497302:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1487425-1488372:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1486082-1486638:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1485638-1485803:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1484286-1485153:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1483334-1483450:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1482765-1482891:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1480924-1480936:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1479268-1479851:-1:exon

CRB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: CRB2
product: crumbs cell polarity complex component 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032708607.1
SIO_010081: CRB2
subclass of: SO_0000673
so part of: CRB2
location: complement(join(1479525..1479848,1482765..1482891,1483334..1483450,1484286..1485153,1485638..1485803,1486082..1486638,1487425..1488372,1497189..1497302,1498190..1498372,1498578..1498717,1499094..1499289,1501354..1502052,1510596..1510691))
location: region:1479525-1510691:-1
so has part: feature:1510596-1510691:-1:exon
so has part: feature:1501354-1502052:-1:exon
so has part: feature:1499094-1499289:-1:exon
so has part: feature:1498578-1498717:-1:exon
so has part: feature:1498190-1498372:-1:exon
so has part: feature:1497189-1497302:-1:exon
so has part: feature:1487425-1488372:-1:exon
so has part: feature:1486082-1486638:-1:exon
so has part: feature:1485638-1485803:-1:exon
so has part: feature:1484286-1485153:-1:exon
so has part: feature:1483334-1483450:-1:exon
so has part: feature:1482765-1482891:-1:exon
so has part: feature:1479525-1479848:-1:exon

position:1479525:-1
position: 1479525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1510596-1510691:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1501354-1502052:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1499094-1499289:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1498578-1498717:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1498190-1498372:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1497189-1497302:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1487425-1488372:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1486082-1486638:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1485638-1485803:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1484286-1485153:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1483334-1483450:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1482765-1482891:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1479525-1479848:-1:exon

position:1479848:-1
position: 1479848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CRB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: CRB2
product: crumbs cell polarity complex component 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032708606.1
SIO_010081: CRB2
subclass of: SO_0000673
so part of: CRB2
location: complement(join(1479525..1479851,1482765..1482891,1483334..1483450,1484286..1485153,1485638..1485803,1486082..1486638,1487425..1488372,1497189..1497302,1498190..1498372,1498578..1498717,1499094..1499289,1501354..1502052,1510596..1510691))
location: region:1479525-1510691:-1
so has part: feature:1510596-1510691:-1:exon
so has part: feature:1501354-1502052:-1:exon
so has part: feature:1499094-1499289:-1:exon
so has part: feature:1498578-1498717:-1:exon
so has part: feature:1498190-1498372:-1:exon
so has part: feature:1497189-1497302:-1:exon
so has part: feature:1487425-1488372:-1:exon
so has part: feature:1486082-1486638:-1:exon
so has part: feature:1485638-1485803:-1:exon
so has part: feature:1484286-1485153:-1:exon
so has part: feature:1483334-1483450:-1:exon
so has part: feature:1482765-1482891:-1:exon
so has part: feature:1479525-1479851:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1510596-1510691:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1501354-1502052:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1499094-1499289:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1498578-1498717:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1498190-1498372:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1497189-1497302:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1487425-1488372:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1486082-1486638:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1485638-1485803:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1484286-1485153:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1483334-1483450:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1482765-1482891:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1479525-1479851:-1:exon

CRB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: CRB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein crumbs homolog 2 isoform X3
translation: MELKKSTSGACNAALLLPLFLLFWGTSYSENDSGCSSSPCENGGSCQDLEEGYQCTCPVEPVAYMGRNCELLYDACTKHDCPAHMSCTPTPGLLEYTCVCEPGPTGTACDHSDECESSPCTDPRWECVDRHSGYSCRCQPGPSGAGCHPESAQCSSQPCLNNGTCTEGTGGFSCLCPPGFSGATCEHDMDECASGPCRNGAICRDGPGEYSCFCVPGYQGYHCEIDIDECASRPCRHNATCLNHMDHYECRCPPGYTGVNCEVEIDECASEPCQNGALCSDHVGFYTCTCAPGYQGMHCEVDVDECESQPCQHNGTCQDLVNRYHCDCSDTGFEGDHCELDILECASNPCLNSATCLEGINHYSCACWPGYTGQDCEEDVDECETEPCHNGGECLERSNPAYYGTQPDFPSAFSPSQAAGFLCRCQPGFTGETCFTNIDECESQPCQNGGLCQDLVNGFLCHCLPGYSGVECAVNINECEEGPCKNGAVCEDGIADYFCHCAPGQDGTVWGGKNCSVKLTGCQTHDCQNEALCIPTYQAESHGHLCQCQPGFSDATCSTPTTFSFASRGYLLVELPGGNESGREAEGERLPSVSLRFRTTLPSAVLFYRGHGAEFLFLELWEGVLHAELKREDVGYPLLLQGPRVDDGQWHKVEVVVHSAVELRLWHDSCEAGVCLQSAPVLPGTAWSPRAFSSLYVGGAEDSVANNTRSQQGFVGCLEDLQVDAEAVLPADLPLGESSVVRPGCDRTEWCLSQPCLHGGLCVDLWATFRCDCARPYGGPACSHERPAATFGLENSTSFASFTLSDSLGADFNISFFLRSRKPHGLLLQIGNQTGPGLTIYLRDGQLRVEVPPTDTVTFAEDVVDGRRHLVALSFQGGTVGAQQWDTHVELGQLVAQPLPAGSEVFIGGHPDPDSAELWGGYFKGCLQDIQLNNHQIQFFQAENYSVPQEHNRTQTGNLVNGCISDDTCKSEPCQNGGRCIVTWNDFHCSCPANFTGKFCEERVWCESDPCPEATTCVDVVAGYVCLANATFSSNSAIEFTTKTSVTRTLSSLHMDFRTRDEDAVLLWAVEEVDSLQVAIRNSSLLVTIRSGNSIEGVTFQSPQPVTDGAWHSISVSMEEPAAPSSRWLLWLDGAGNVTLQGSAGNLDFLKNNVLVVLAENFTGCLGQVQIGGLYLPFPAPRPYPQPEQFLQAGGGPVPLGCAGADVCASSPCLHGGTCHDLFDAFRCACGAGWGGQRCQDNLDDCQPSPCVHGDCRDAVADFQCECFRGFIGKRCDINVDDCVRHQCLNGATCVDGVYGYSCKCPPQFSGPRCEWPFPPQQCGKNFTCLNGGRCVTESWGANCSCRPGFTGRNCQININECEPNPCQNGGTCQDSENRYECVCSASYTGERCDINRVWAHLSHSSVVGAVGAAGAALLLVVLAATAIAMKRRRATQGTYSPSRQEKDGARVEMWNVIKMPPTERLI
SIO_010081: CRB2
subclass of: SO_0000673
so part of: CRB2
location: complement(join(1479633..1479848,1482765..1482891,1483334..1483450,1484286..1485153,1485638..1485803,1486082..1486638,1487425..1488372,1497189..1497302,1498190..1498372,1498578..1498717,1499094..1499289,1501354..1502052,1510596..1510668))
location: region:1479633-1510668:-1
so has part: feature:1510596-1510668:-1:exon
so has part: feature:1501354-1502052:-1:exon
so has part: feature:1499094-1499289:-1:exon
so has part: feature:1498578-1498717:-1:exon
so has part: feature:1498190-1498372:-1:exon
so has part: feature:1497189-1497302:-1:exon
so has part: feature:1487425-1488372:-1:exon
so has part: feature:1486082-1486638:-1:exon
so has part: feature:1485638-1485803:-1:exon
so has part: feature:1484286-1485153:-1:exon
so has part: feature:1483334-1483450:-1:exon
so has part: feature:1482765-1482891:-1:exon
so has part: feature:1479633-1479848:-1:exon

XP_032564498.1
type: Protein
SIO_000068: ncbiprotein

position:1479633:-1
position: 1479633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1510596-1510668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1501354-1502052:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1499094-1499289:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1498578-1498717:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1498190-1498372:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1497189-1497302:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1487425-1488372:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1486082-1486638:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1485638-1485803:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1484286-1485153:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1483334-1483450:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1482765-1482891:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1479633-1479848:-1:exon

CRB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: CRB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein crumbs homolog 2 isoform X2
translation: MELKKSTSGACNAALLLPLFLLFWGTSYSENDSGCSSSPCENGGSCQDLEEGYQCTCPVEPVAYMGRNCELLYDACTKHDCPAHMSCTPTPGLLEYTCVCEPGPTGTACDHSDECESSPCTDPRWECVDRHSGYSCRCQPGPSGAGCHPESAQCSSQPCLNNGTCTEGTGGFSCLCPPGFSGATCEHDMDECASGPCRNGAICRDGPGEYSCFCVPGYQGYHCEIDIDECASRPCRHNATCLNHMDHYECRCPPGYTGVNCEVEIDECASEPCQNGALCSDHVGFYTCTCAPGYQGMHCEVDVDECESQPCQHNGTCQDLVNRYHCDCSDTGFEGDHCELDILECASNPCLNSATCLEGINHYSCACWPGYTGQDCEEDVDECETEPCHNGGECLERSNPAYYGTQPDFPSAFSPSQAAGFLCRCQPGFTGETCFTNIDECESQPCQNGGLCQDLVNGFLCHCLPGYSGVECAVNINECEEGPCKNGAVCEDGIADYFCHCAPGQDGTVWGGKNCSVKLTGCQTHDCQNEALCIPTYQAESHGHLCQCQPGFSDATCSTPTTFSFASRGYLLVELPGGNESGREAEGERLPSVSLRFRTTLPSAVLFYRGHGAEFLFLELWEGVLHAELKREDVGYPLLLQGPRVDDGQWHKVEVVVHSAVELRLWHDSCEAGVCLQSAPVLPGTAWSPRAFSSLYVGGAEDSVANNTRSQQGFVGCLEDLQVDAEAVLPADLPLGESSVVRPGCDRTEWCLSQPCLHGGLCVDLWATFRCDCARPYGGPACSHERPAATFGLENSTSFASFTLSDSLGADFNISFFLRSRKPHGLLLQIGNQTGPGLTIYLRDGQLRVEVPPTDTVTFAEDVVDGRRHLVALSFQGGTVGAQQWDTHVELGQLVAQPLPAGSEVFIGGHPDPDSAELWGGYFKGCLQDIQLNNHQIQFFQAENYSVPQEHNRTQTGNLVNGCISDDTCKSEPCQNGGRCIVTWNDFHCSCPANFTGKFCEERVWCESDPCPEATTCVDVVAGYVCLANATFSSNSAIEFTTKTSVTRTLSSLHMDFRTRDEDAVLLWAVEEVDSLQVAIRNSSLLVTIRSGNSIEGVTFQSPQPVTDGAWHSISVSMEEPAAPSSRWLLWLDGAGNVTLQGSAGNLDFLKNNVLVVLAENFTGCLGQVQIGGLYLPFPAPRPYPQPEQFLQAGGGPVPLGCAGADVCASSPCLHGGTCHDLFDAFRCACGAGWGGQRCQDNLDDCQPSPCVHGDCRDAVADFQCECFRGFIGKRCDINVDDCVRHQCLNGATCVDGVYGYSCKCPPQFSGPRCEWPFPPQQCGKNFTCLNGGRCVTESWGANCSCRPGFTGRNCQININECEPNPCQNGGTCQDSENRYECVCSASYTGERCDINQRVWAHLSHSSVVGAVGAAGAALLLVVLAATAIAMKRRRATQGTYSPSRQEKDGARVEMWNVIKMPPTERLI
SIO_010081: CRB2
subclass of: SO_0000673
so part of: CRB2
location: complement(join(1479633..1479851,1482765..1482891,1483334..1483450,1484286..1485153,1485638..1485803,1486082..1486638,1487425..1488372,1497189..1497302,1498190..1498372,1498578..1498717,1499094..1499289,1501354..1502052,1510596..1510668))
location: region:1479633-1510668:-1
so has part: feature:1510596-1510668:-1:exon
so has part: feature:1501354-1502052:-1:exon
so has part: feature:1499094-1499289:-1:exon
so has part: feature:1498578-1498717:-1:exon
so has part: feature:1498190-1498372:-1:exon
so has part: feature:1497189-1497302:-1:exon
so has part: feature:1487425-1488372:-1:exon
so has part: feature:1486082-1486638:-1:exon
so has part: feature:1485638-1485803:-1:exon
so has part: feature:1484286-1485153:-1:exon
so has part: feature:1483334-1483450:-1:exon
so has part: feature:1482765-1482891:-1:exon
so has part: feature:1479633-1479851:-1:exon

XP_032564497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1510596-1510668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1501354-1502052:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1499094-1499289:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1498578-1498717:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1498190-1498372:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1497189-1497302:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1487425-1488372:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1486082-1486638:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1485638-1485803:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1484286-1485153:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1483334-1483450:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1482765-1482891:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1479633-1479851:-1:exon

STRBP
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: STRBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1533083..1592402
location: region:1533083-1592402:1
so has part: feature:1533083-1592402:1:exon
subclass of: SO_0000010

116797245
type: Gene
SIO_000068: ncbigene

position:1533083:1
position: 1533083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1592402:1
position: 1592402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1533083-1592402:1:exon

STRBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: STRBP
product: spermatid perinuclear RNA binding protein, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032708625.1
SIO_010081: STRBP
subclass of: SO_0000673
so part of: STRBP
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location: region:1533083-1592402:1
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urn:…
SIO_000300: 1
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 12
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urn:…
SIO_000300: 13
SIO_000628: feature:1573634-1573768:1:exon

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urn:…
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urn:…
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urn:…
SIO_000300: 16
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SIO_000300: 17
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position:1592129:1
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reference: sequence
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STRBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: STRBP
product: spermatid perinuclear RNA binding protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032708622.1
SIO_010081: STRBP
subclass of: SO_0000673
so part of: STRBP
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location: region:1533083-1575556:1
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position:1575556:1
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urn:…
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SIO_000300: 6
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position:1566239:1
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urn:…
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position:1567529:1
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reference: sequence
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SIO_000300: 12
SIO_000628: feature:1570539-1570738:1:exon

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SIO_000300: 13
SIO_000628: feature:1572705-1572863:1:exon

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SIO_000300: 14
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SIO_000300: 15
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SIO_000300: 16
SIO_000628: feature:1574871-1574994:1:exon

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SIO_000300: 17
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position:1575274:1
position: 1575274
reference: sequence
type: ForwardStrandPosition
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STRBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: STRBP
product: spermatid perinuclear RNA binding protein, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032708626.1
SIO_010081: STRBP
subclass of: SO_0000673
so part of: STRBP
location: join(1533084..1533187,1555512..1555687,1557931..1558148,1558850..1559015,1560749..1560893,1566239..1566333,1566753..1566848,1567529..1567640,1568202..1568299,1568744..1568855,1569554..1569646,1570539..1570738,1572705..1572863,1573634..1573768,1574201..1574341,1574871..1574994,1576811..1576855,1583011..1583075,1588881..1592402)
location: region:1533084-1592402:1
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position:1533084:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 1
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SIO_000300: 6
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SIO_000628: feature:1569554-1569646:1:exon

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SIO_000300: 13
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SIO_000300: 14
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SIO_000300: 15
SIO_000628: feature:1574201-1574341:1:exon

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SIO_000300: 16
SIO_000628: feature:1574871-1574994:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1576811-1576855:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1583011-1583075:1:exon

position:1583011:1
position: 1583011
reference: sequence
type: ForwardStrandPosition
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position:1583075:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 19
SIO_000628: feature:1588881-1592402:1:exon

position:1588881:1
position: 1588881
reference: sequence
type: ForwardStrandPosition
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STRBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: STRBP
product: spermatid perinuclear RNA binding protein, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032708627.1
SIO_010081: STRBP
subclass of: SO_0000673
so part of: STRBP
location: join(1533084..1533187,1555512..1555687,1557931..1558148,1558850..1559015,1560749..1560893,1566239..1566333,1566753..1566848,1567529..1567640,1568202..1568299,1568744..1568855,1569554..1569646,1570539..1570738,1572705..1572863,1573634..1573768,1574201..1574341,1574871..1574994,1576811..1576855,1583011..1583075,1589683..1592402)
location: region:1533084-1592402:1
so has part: feature:1533084-1533187:1:exon
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urn:…
SIO_000300: 1
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urn:…
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SIO_000300: 8
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urn:…
SIO_000300: 9
SIO_000628: feature:1568202-1568299:1:exon

urn:…
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SIO_000300: 12
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urn:…
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urn:…
SIO_000300: 14
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SIO_000300: 15
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urn:…
SIO_000300: 16
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urn:…
SIO_000300: 17
SIO_000628: feature:1576811-1576855:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1583011-1583075:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1589683-1592402:1:exon

position:1589683:1
position: 1589683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STRBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: STRBP
product: spermatid perinuclear RNA binding protein, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032708629.1
SIO_010081: STRBP
subclass of: SO_0000673
so part of: STRBP
location: join(1533084..1533187,1555512..1555687,1557931..1558148,1558850..1559015,1560749..1560893,1566239..1566333,1566753..1566848,1567529..1567640,1568202..1568299,1568744..1568855,1569554..1569646,1570539..1570738,1572705..1572863,1573634..1573768,1574201..1574341,1574871..1574994,1576811..1576855,1583352..1592402)
location: region:1533084-1592402:1
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urn:…
SIO_000300: 1
SIO_000628: feature:1533084-1533187:1:exon

urn:…
SIO_000300: 2
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urn:…
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urn:…
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urn:…
SIO_000300: 11
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urn:…
SIO_000300: 12
SIO_000628: feature:1570539-1570738:1:exon

urn:…
SIO_000300: 13
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urn:…
SIO_000300: 14
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urn:…
SIO_000300: 15
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urn:…
SIO_000300: 16
SIO_000628: feature:1574871-1574994:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1576811-1576855:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1583352-1592402:1:exon

position:1583352:1
position: 1583352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STRBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: STRBP
product: spermatid perinuclear RNA binding protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032708619.1
SIO_010081: STRBP
subclass of: SO_0000673
so part of: STRBP
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STRBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: STRBP
product: spermatid perinuclear RNA binding protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032708620.1
SIO_010081: STRBP
subclass of: SO_0000673
so part of: STRBP
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STRBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: STRBP
product: spermatid perinuclear RNA binding protein, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032708628.1
SIO_010081: STRBP
subclass of: SO_0000673
so part of: STRBP
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position:1589736:1
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reference: sequence
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urn:…
SIO_000300: 20
SIO_000628: feature:1592129-1592237:1:exon

STRBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: STRBP
product: spermatid perinuclear RNA binding protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032708621.1
SIO_010081: STRBP
subclass of: SO_0000673
so part of: STRBP
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urn:…
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position:1588632:1
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type: ForwardStrandPosition
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STRBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: STRBP
product: spermatid perinuclear RNA binding protein, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 24 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032708623.1
SIO_010081: STRBP
subclass of: SO_0000673
so part of: STRBP
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