Chiroxiphia lanceolata isolate bChiLan1 chromosome 15, bChiLan1.pri, whole genome shotgun sequence.
type: Entry
definition: Chiroxiphia lanceolata isolate bChiLan1 chromosome 15, bChiLan1.pri, whole genome shotgun sequence.
sequence version: NC_045651.1
sequence date: 2020-02-29
sequence: sequence
division: CON
label: NC_045651.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA603801
dblink: SAMN12620979
keyword: WGS
keyword: RefSeq
source: Chiroxiphia lanceolata (lance-tailed manakin)
organism: Chiroxiphia lanceolata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Pipridae; Chiroxiphia.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020547.1.\nAssembly name: bChiLan1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/01/03. The original whole-genome shotgun project has the\naccession WNMC00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 08-OCT-2019\nAssembly Method :: FALCON v. DNANexus 1.9.0; FALCON-Unzip v.\n DNANexus 1.0.6; purge_haplotigs v.\n v1.0.3+ 1.Nov.2018; scaff10x v. 4.1.0;\n Bionano Solve DLS v. 3.2.1; Salsa HiC v.\n 2.2; Arrow smrtanalysis Pacbio polishing\n & gap filling v. 6.0.0.47841; longranger\n align v. 2.2.2; freebayes Illumina\n polishing v. 1.3.1; gEVAL manual curation\n v. 2019-10-08; VGP assembly pipeline v.\n 1.5\nAssembly Name :: bChiLan1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 67.75x\nSequencing Technology :: PacBio Sequel I CLR; llumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Chiroxiphia lanceolata Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 19292269
topology: linear
so has quality: SO_0000987
location: 1..19292269
location: region:1-19292269:1
RO_0002162: 296741

NC_045651
type: RefSeq
SIO_000068: refseq

PRJNA603801
type: BioProject
SIO_000068: bioproject

SAMN12620979
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19292269:1
position: 19292269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-19292269:1:source
so part of: sequence
organism: Chiroxiphia lanceolata
mol type: genomic DNA
isolate: bChiLan1
chromosome: 15
sex: female
tissue type: isolated red blood cells
dev stage: adult
country: Panama: Isla Boca Btava
lat lon: 8.2166658 N 82.2666656 W
collection date: 14-Apr-2017
collected by: Emily DuVal

296741
type: Taxonomy
SIO_000068: taxonomy

LOC116794558
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794558
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 35133..47267
location: region:35133-47267:1
so has part: feature:35133-47267:1:exon
subclass of: SO_0000011

116794558
type: Gene
SIO_000068: ncbigene

position:35133:1
position: 35133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47267:1
position: 47267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35133-47267:1:exon

LOC116794558
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116794558
product: uncharacterized LOC116794558
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004359824.1
SIO_010081: LOC116794558
subclass of: SO_0000673
so part of: LOC116794558
location: join(35133..35239,47054..47056,47197..47267)
location: region:35133-47267:1
so has part: feature:35133-35239:1:exon
so has part: feature:47054-47056:1:exon
so has part: feature:47197-47267:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35133-35239:1:exon

position:35239:1
position: 35239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:47054-47056:1:exon

position:47054:1
position: 47054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47056:1
position: 47056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:47197-47267:1:exon

position:47197:1
position: 47197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCNIP1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: KCNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 84579..583442
location: region:84579-583442:1
so has part: feature:84579-583442:1:exon
subclass of: SO_0000010

116794224
type: Gene
SIO_000068: ncbigene

position:84579:1
position: 84579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583442:1
position: 583442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84579-583442:1:exon

KCNIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: KCNIP1
product: potassium voltage-gated channel interacting protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 long SRA reads, 44 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032702739.1
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(84579..84595,85636..85752,564078..564202,570983..571052,573843..573913,575607..575714,576656..576760,577312..577374,579557..583442)
location: region:84579-583442:1
so has part: feature:84579-84595:1:exon
so has part: feature:85636-85752:1:exon
so has part: feature:564078-564202:1:exon
so has part: feature:570983-571052:1:exon
so has part: feature:573843-573913:1:exon
so has part: feature:575607-575714:1:exon
so has part: feature:576656-576760:1:exon
so has part: feature:577312-577374:1:exon
so has part: feature:579557-583442:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:84579-84595:1:exon

position:84595:1
position: 84595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:85636-85752:1:exon

position:85636:1
position: 85636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85752:1
position: 85752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:564078-564202:1:exon

position:564078:1
position: 564078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564202:1
position: 564202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:570983-571052:1:exon

position:570983:1
position: 570983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571052:1
position: 571052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:573843-573913:1:exon

position:573843:1
position: 573843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573913:1
position: 573913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:575607-575714:1:exon

position:575607:1
position: 575607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575714:1
position: 575714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:576656-576760:1:exon

position:576656:1
position: 576656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576760:1
position: 576760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:577312-577374:1:exon

position:577312:1
position: 577312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577374:1
position: 577374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:579557-583442:1:exon

position:579557:1
position: 579557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCNIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: KCNIP1
product: potassium voltage-gated channel interacting protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 long SRA reads, 44 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032702738.1
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(84926..85752,564078..564202,570983..571052,573843..573913,575607..575714,576656..576760,577312..577374,579557..583442)
location: region:84926-583442:1
so has part: feature:84926-85752:1:exon
so has part: feature:564078-564202:1:exon
so has part: feature:570983-571052:1:exon
so has part: feature:573843-573913:1:exon
so has part: feature:575607-575714:1:exon
so has part: feature:576656-576760:1:exon
so has part: feature:577312-577374:1:exon
so has part: feature:579557-583442:1:exon

position:84926:1
position: 84926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84926-85752:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564078-564202:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:570983-571052:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:573843-573913:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:575607-575714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:576656-576760:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:577312-577374:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:579557-583442:1:exon

KCNIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: KCNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Kv channel-interacting protein 1 isoform X4
translation: MSGCSKRCKHGIVKFARTIFKLITGTLSKDKIEDELEMTTVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASMYAHYLFNAFDTAQNGSVKFEDFVMALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDAPRQHVEVFFQKMDKNKDGVVTLDEFIESCQEDDNIMRSLQLFENVM
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(85665..85752,564078..564202,570983..571052,573843..573913,575607..575714,576656..576760,577312..577374,579557..579604)
location: region:85665-579604:1
so has part: feature:85665-85752:1:exon
so has part: feature:564078-564202:1:exon
so has part: feature:570983-571052:1:exon
so has part: feature:573843-573913:1:exon
so has part: feature:575607-575714:1:exon
so has part: feature:576656-576760:1:exon
so has part: feature:577312-577374:1:exon
so has part: feature:579557-579604:1:exon

XP_032558629.1
type: Protein
SIO_000068: ncbiprotein

position:85665:1
position: 85665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579604:1
position: 579604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85665-85752:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564078-564202:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:570983-571052:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:573843-573913:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:575607-575714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:576656-576760:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:577312-577374:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:579557-579604:1:exon

KCNIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: KCNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Kv channel-interacting protein 1 isoform X4
translation: MSGCSKRCKHGIVKFARTIFKLITGTLSKDKIEDELEMTTVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASMYAHYLFNAFDTAQNGSVKFEDFVMALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDAPRQHVEVFFQKMDKNKDGVVTLDEFIESCQEDDNIMRSLQLFENVM
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(85665..85752,564078..564202,570983..571052,573843..573913,575607..575714,576656..576760,577312..577374,579557..579604)
location: region:85665-579604:1
so has part: feature:85665-85752:1:exon
so has part: feature:564078-564202:1:exon
so has part: feature:570983-571052:1:exon
so has part: feature:573843-573913:1:exon
so has part: feature:575607-575714:1:exon
so has part: feature:576656-576760:1:exon
so has part: feature:577312-577374:1:exon
so has part: feature:579557-579604:1:exon

XP_032558630.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85665-85752:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564078-564202:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:570983-571052:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:573843-573913:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:575607-575714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:576656-576760:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:577312-577374:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:579557-579604:1:exon

KCNMB1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: KCNMB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(126388..137147)
location: region:126388-137147:-1
so has part: feature:126388-137147:-1:exon
subclass of: SO_0000010

116794227
type: Gene
SIO_000068: ncbigene

position:126388:-1
position: 126388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137147:-1
position: 137147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126388-137147:-1:exon

KCNMB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: KCNMB1
product: potassium calcium-activated channel subfamily M regulatory beta subunit 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032702752.1
SIO_010081: KCNMB1
subclass of: SO_0000673
so part of: KCNMB1
location: complement(join(126388..127730,129699..129776,129867..129894,131343..131508,136969..137147))
location: region:126388-137147:-1
so has part: feature:136969-137147:-1:exon
so has part: feature:131343-131508:-1:exon
so has part: feature:129867-129894:-1:exon
so has part: feature:129699-129776:-1:exon
so has part: feature:126388-127730:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:136969-137147:-1:exon

position:136969:-1
position: 136969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:131343-131508:-1:exon

position:131343:-1
position: 131343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131508:-1
position: 131508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:129867-129894:-1:exon

position:129867:-1
position: 129867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129894:-1
position: 129894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:129699-129776:-1:exon

position:129699:-1
position: 129699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129776:-1
position: 129776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:126388-127730:-1:exon

position:127730:-1
position: 127730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KCNMB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: KCNMB1
product: potassium calcium-activated channel subfamily M regulatory beta subunit 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032702751.1
SIO_010081: KCNMB1
subclass of: SO_0000673
so part of: KCNMB1
location: complement(join(126388..127730,129699..129894,131343..131508,136969..137147))
location: region:126388-137147:-1
so has part: feature:136969-137147:-1:exon
so has part: feature:131343-131508:-1:exon
so has part: feature:129699-129894:-1:exon
so has part: feature:126388-127730:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:136969-137147:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131343-131508:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:129699-129894:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126388-127730:-1:exon

KCNMB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: KCNMB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-activated potassium channel subunit beta-1 isoform X2
translation: MLGKKLVTAQKRGETRALCLGLGMVACSMMMYFFIGITIVPFYTKSVWTTETVCKVWVNLTTSGQEVMLYQTEDTLERNPKCSYVPDKSENSKEVKARIETIASNFKKYHTFPCYYDPGGTQTNVILSRLYPPKGLLFAFLWPTLMFTGGCLIIVLVKISQYVSVLSAWQ
SIO_010081: KCNMB1
subclass of: SO_0000673
so part of: KCNMB1
location: complement(join(127461..127730,129699..129776,129867..129894,131343..131479))
location: region:127461-131479:-1
so has part: feature:131343-131479:-1:exon
so has part: feature:129867-129894:-1:exon
so has part: feature:129699-129776:-1:exon
so has part: feature:127461-127730:-1:exon

XP_032558643.1
type: Protein
SIO_000068: ncbiprotein

position:127461:-1
position: 127461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131479:-1
position: 131479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131343-131479:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:129867-129894:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:129699-129776:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:127461-127730:-1:exon

KCNMB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: KCNMB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-activated potassium channel subunit beta-1 isoform X1
translation: MLGKKLVTAQKRGETRALCLGLGMVACSMMMYFFIGITIVPFYTKSVWTTETVCKVLKANIEDKVLCPDSEGSEDEDIFSYPCLQVWVNLTTSGQEVMLYQTEDTLERNPKCSYVPDKSENSKEVKARIETIASNFKKYHTFPCYYDPGGTQTNVILSRLYPPKGLLFAFLWPTLMFTGGCLIIVLVKISQYVSVLSAWQ
SIO_010081: KCNMB1
subclass of: SO_0000673
so part of: KCNMB1
location: complement(join(127461..127730,129699..129894,131343..131479))
location: region:127461-131479:-1
so has part: feature:131343-131479:-1:exon
so has part: feature:129699-129894:-1:exon
so has part: feature:127461-127730:-1:exon

XP_032558642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131343-131479:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:129699-129894:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:127461-127730:-1:exon

KCNIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: KCNIP1
product: potassium voltage-gated channel interacting protein 1, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032702748.1
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(237518..237613,564078..564202,570983..571052,573843..573913,575607..575714,576656..576760,577312..577374,579557..583442)
location: region:237518-583442:1
so has part: feature:237518-237613:1:exon
so has part: feature:564078-564202:1:exon
so has part: feature:570983-571052:1:exon
so has part: feature:573843-573913:1:exon
so has part: feature:575607-575714:1:exon
so has part: feature:576656-576760:1:exon
so has part: feature:577312-577374:1:exon
so has part: feature:579557-583442:1:exon

position:237518:1
position: 237518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237518-237613:1:exon

position:237613:1
position: 237613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:564078-564202:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:570983-571052:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:573843-573913:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:575607-575714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:576656-576760:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:577312-577374:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:579557-583442:1:exon

KCNIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: KCNIP1
product: potassium voltage-gated channel interacting protein 1, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032702747.1
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(277728..278041,564078..564202,570983..571052,573843..573913,575607..575714,576656..576760,577312..577374,579557..583442)
location: region:277728-583442:1
so has part: feature:277728-278041:1:exon
so has part: feature:564078-564202:1:exon
so has part: feature:570983-571052:1:exon
so has part: feature:573843-573913:1:exon
so has part: feature:575607-575714:1:exon
so has part: feature:576656-576760:1:exon
so has part: feature:577312-577374:1:exon
so has part: feature:579557-583442:1:exon

position:277728:1
position: 277728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277728-278041:1:exon

position:278041:1
position: 278041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:564078-564202:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:570983-571052:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:573843-573913:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:575607-575714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:576656-576760:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:577312-577374:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:579557-583442:1:exon

KCNIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: KCNIP1
product: potassium voltage-gated channel interacting protein 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 long SRA reads, 44 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032702740.1
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(278066..278361,564078..564202,570983..571052,573843..573913,575607..575714,576656..576760,577312..577374,579557..583442)
location: region:278066-583442:1
so has part: feature:278066-278361:1:exon
so has part: feature:564078-564202:1:exon
so has part: feature:570983-571052:1:exon
so has part: feature:573843-573913:1:exon
so has part: feature:575607-575714:1:exon
so has part: feature:576656-576760:1:exon
so has part: feature:577312-577374:1:exon
so has part: feature:579557-583442:1:exon

position:278066:1
position: 278066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278066-278361:1:exon

position:278361:1
position: 278361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:564078-564202:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:570983-571052:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:573843-573913:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:575607-575714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:576656-576760:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:577312-577374:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:579557-583442:1:exon

KCNIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: KCNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Kv channel-interacting protein 1 isoform X5
translation: MGAVMGTFSSLQTKQRRPSKDKIEDELEMTTVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASMYAHYLFNAFDTAQNGSVKFEDFVMALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDAPRQHVEVFFQKMDKNKDGVVTLDEFIESCQEDDNIMRSLQLFENVM
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(278301..278361,564078..564202,570983..571052,573843..573913,575607..575714,576656..576760,577312..577374,579557..579604)
location: region:278301-579604:1
so has part: feature:278301-278361:1:exon
so has part: feature:564078-564202:1:exon
so has part: feature:570983-571052:1:exon
so has part: feature:573843-573913:1:exon
so has part: feature:575607-575714:1:exon
so has part: feature:576656-576760:1:exon
so has part: feature:577312-577374:1:exon
so has part: feature:579557-579604:1:exon

XP_032558631.1
type: Protein
SIO_000068: ncbiprotein

position:278301:1
position: 278301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278301-278361:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564078-564202:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:570983-571052:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:573843-573913:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:575607-575714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:576656-576760:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:577312-577374:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:579557-579604:1:exon

KCNIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: KCNIP1
product: potassium voltage-gated channel interacting protein 1, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032702749.1
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(422758..422832,564078..564202,570983..571052,573843..573913,575607..575714,576656..576760,577312..577374,579557..583442)
location: region:422758-583442:1
so has part: feature:422758-422832:1:exon
so has part: feature:564078-564202:1:exon
so has part: feature:570983-571052:1:exon
so has part: feature:573843-573913:1:exon
so has part: feature:575607-575714:1:exon
so has part: feature:576656-576760:1:exon
so has part: feature:577312-577374:1:exon
so has part: feature:579557-583442:1:exon

position:422758:1
position: 422758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422758-422832:1:exon

position:422832:1
position: 422832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:564078-564202:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:570983-571052:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:573843-573913:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:575607-575714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:576656-576760:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:577312-577374:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:579557-583442:1:exon

KCNIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: KCNIP1
product: potassium voltage-gated channel interacting protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 long SRA reads, 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032702736.1
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(438524..438733,564078..564202,570983..571052,573843..573913,575607..575714,576656..576760,577312..577374,579557..583442)
location: region:438524-583442:1
so has part: feature:438524-438733:1:exon
so has part: feature:564078-564202:1:exon
so has part: feature:570983-571052:1:exon
so has part: feature:573843-573913:1:exon
so has part: feature:575607-575714:1:exon
so has part: feature:576656-576760:1:exon
so has part: feature:577312-577374:1:exon
so has part: feature:579557-583442:1:exon

position:438524:1
position: 438524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438524-438733:1:exon

position:438733:1
position: 438733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:564078-564202:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:570983-571052:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:573843-573913:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:575607-575714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:576656-576760:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:577312-577374:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:579557-583442:1:exon

KCNIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: KCNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Kv channel-interacting protein 1 isoform X2
translation: MNLEGLEMLFVLVIIVGFVKALEHLGLLEGNYEDKIEDELEMTTVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASMYAHYLFNAFDTAQNGSVKFEDFVMALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDAPRQHVEVFFQKMDKNKDGVVTLDEFIESCQEDDNIMRSLQLFENVM
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(438634..438733,564078..564202,570983..571052,573843..573913,575607..575714,576656..576760,577312..577374,579557..579604)
location: region:438634-579604:1
so has part: feature:438634-438733:1:exon
so has part: feature:564078-564202:1:exon
so has part: feature:570983-571052:1:exon
so has part: feature:573843-573913:1:exon
so has part: feature:575607-575714:1:exon
so has part: feature:576656-576760:1:exon
so has part: feature:577312-577374:1:exon
so has part: feature:579557-579604:1:exon

XP_032558627.1
type: Protein
SIO_000068: ncbiprotein

position:438634:1
position: 438634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438634-438733:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564078-564202:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:570983-571052:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:573843-573913:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:575607-575714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:576656-576760:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:577312-577374:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:579557-579604:1:exon

KCNIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: KCNIP1
product: potassium voltage-gated channel interacting protein 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032702744.1
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(438710..438733,514022..514182,564078..564202,570983..571052,573843..573913,575607..575714,576656..576760,577312..577374,579557..583442)
location: region:438710-583442:1
so has part: feature:438710-438733:1:exon
so has part: feature:514022-514182:1:exon
so has part: feature:564078-564202:1:exon
so has part: feature:570983-571052:1:exon
so has part: feature:573843-573913:1:exon
so has part: feature:575607-575714:1:exon
so has part: feature:576656-576760:1:exon
so has part: feature:577312-577374:1:exon
so has part: feature:579557-583442:1:exon

position:438710:1
position: 438710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438710-438733:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:514022-514182:1:exon

position:514022:1
position: 514022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514182:1
position: 514182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:564078-564202:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:570983-571052:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:573843-573913:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:575607-575714:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:576656-576760:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:577312-577374:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:579557-583442:1:exon

KCNIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: KCNIP1
product: potassium voltage-gated channel interacting protein 1, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 long SRA reads, 44 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032702750.1
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(451295..451397,564078..564202,570983..571052,573843..573913,575607..575714,576656..576760,577312..577374,579557..583442)
location: region:451295-583442:1
so has part: feature:451295-451397:1:exon
so has part: feature:564078-564202:1:exon
so has part: feature:570983-571052:1:exon
so has part: feature:573843-573913:1:exon
so has part: feature:575607-575714:1:exon
so has part: feature:576656-576760:1:exon
so has part: feature:577312-577374:1:exon
so has part: feature:579557-583442:1:exon

position:451295:1
position: 451295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451295-451397:1:exon

position:451397:1
position: 451397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:564078-564202:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:570983-571052:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:573843-573913:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:575607-575714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:576656-576760:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:577312-577374:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:579557-583442:1:exon

KCNIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: KCNIP1
product: potassium voltage-gated channel interacting protein 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032702742.1
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(451301..451397,514022..514182,564078..564202,570983..571052,573843..573913,575607..575714,576656..576760,577312..577374,579557..583442)
location: region:451301-583442:1
so has part: feature:451301-451397:1:exon
so has part: feature:514022-514182:1:exon
so has part: feature:564078-564202:1:exon
so has part: feature:570983-571052:1:exon
so has part: feature:573843-573913:1:exon
so has part: feature:575607-575714:1:exon
so has part: feature:576656-576760:1:exon
so has part: feature:577312-577374:1:exon
so has part: feature:579557-583442:1:exon

position:451301:1
position: 451301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451301-451397:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:514022-514182:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:564078-564202:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:570983-571052:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:573843-573913:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:575607-575714:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:576656-576760:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:577312-577374:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:579557-583442:1:exon

KCNIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: KCNIP1
product: potassium voltage-gated channel interacting protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 long SRA reads, 44 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032702737.1
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(452711..452848,564078..564202,570983..571052,573843..573913,575607..575714,576656..576760,577312..577374,579557..583442)
location: region:452711-583442:1
so has part: feature:452711-452848:1:exon
so has part: feature:564078-564202:1:exon
so has part: feature:570983-571052:1:exon
so has part: feature:573843-573913:1:exon
so has part: feature:575607-575714:1:exon
so has part: feature:576656-576760:1:exon
so has part: feature:577312-577374:1:exon
so has part: feature:579557-583442:1:exon

position:452711:1
position: 452711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452711-452848:1:exon

position:452848:1
position: 452848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:564078-564202:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:570983-571052:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:573843-573913:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:575607-575714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:576656-576760:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:577312-577374:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:579557-583442:1:exon

KCNIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: KCNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Kv channel-interacting protein 1 isoform X3
translation: MGGMPPPCHVAVKLMLQLRQREAKPSRLFLDKIEDELEMTTVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASMYAHYLFNAFDTAQNGSVKFEDFVMALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDAPRQHVEVFFQKMDKNKDGVVTLDEFIESCQEDDNIMRSLQLFENVM
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(452758..452848,564078..564202,570983..571052,573843..573913,575607..575714,576656..576760,577312..577374,579557..579604)
location: region:452758-579604:1
so has part: feature:452758-452848:1:exon
so has part: feature:564078-564202:1:exon
so has part: feature:570983-571052:1:exon
so has part: feature:573843-573913:1:exon
so has part: feature:575607-575714:1:exon
so has part: feature:576656-576760:1:exon
so has part: feature:577312-577374:1:exon
so has part: feature:579557-579604:1:exon

XP_032558628.1
type: Protein
SIO_000068: ncbiprotein

position:452758:1
position: 452758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452758-452848:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564078-564202:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:570983-571052:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:573843-573913:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:575607-575714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:576656-576760:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:577312-577374:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:579557-579604:1:exon

KCNIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: KCNIP1
product: potassium voltage-gated channel interacting protein 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032702743.1
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(508592..508621,514022..514182,564078..564202,570983..571052,573843..573913,575607..575714,576656..576760,577312..577374,579557..583442)
location: region:508592-583442:1
so has part: feature:508592-508621:1:exon
so has part: feature:514022-514182:1:exon
so has part: feature:564078-564202:1:exon
so has part: feature:570983-571052:1:exon
so has part: feature:573843-573913:1:exon
so has part: feature:575607-575714:1:exon
so has part: feature:576656-576760:1:exon
so has part: feature:577312-577374:1:exon
so has part: feature:579557-583442:1:exon

position:508592:1
position: 508592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508592-508621:1:exon

position:508621:1
position: 508621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:514022-514182:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:564078-564202:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:570983-571052:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:573843-573913:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:575607-575714:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:576656-576760:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:577312-577374:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:579557-583442:1:exon

KCNIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: KCNIP1
product: potassium voltage-gated channel interacting protein 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032702741.1
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(511352..511512,514022..514182,564078..564202,570983..571052,573843..573913,575607..575714,576656..576760,577312..577374,579557..583442)
location: region:511352-583442:1
so has part: feature:511352-511512:1:exon
so has part: feature:514022-514182:1:exon
so has part: feature:564078-564202:1:exon
so has part: feature:570983-571052:1:exon
so has part: feature:573843-573913:1:exon
so has part: feature:575607-575714:1:exon
so has part: feature:576656-576760:1:exon
so has part: feature:577312-577374:1:exon
so has part: feature:579557-583442:1:exon

position:511352:1
position: 511352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511352-511512:1:exon

position:511512:1
position: 511512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:514022-514182:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:564078-564202:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:570983-571052:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:573843-573913:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:575607-575714:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:576656-576760:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:577312-577374:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:579557-583442:1:exon

KCNIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: KCNIP1
product: potassium voltage-gated channel interacting protein 1, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032702745.1
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(511745..511760,514022..514182,564078..564202,570983..571052,573843..573913,575607..575714,576656..576760,577312..577374,579557..583442)
location: region:511745-583442:1
so has part: feature:511745-511760:1:exon
so has part: feature:514022-514182:1:exon
so has part: feature:564078-564202:1:exon
so has part: feature:570983-571052:1:exon
so has part: feature:573843-573913:1:exon
so has part: feature:575607-575714:1:exon
so has part: feature:576656-576760:1:exon
so has part: feature:577312-577374:1:exon
so has part: feature:579557-583442:1:exon

position:511745:1
position: 511745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511745-511760:1:exon

position:511760:1
position: 511760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:514022-514182:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:564078-564202:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:570983-571052:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:573843-573913:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:575607-575714:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:576656-576760:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:577312-577374:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:579557-583442:1:exon

KCNIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: KCNIP1
product: potassium voltage-gated channel interacting protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 long SRA reads, 49 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032702735.1
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(519430..519593,564078..564202,570983..571052,573843..573913,575607..575714,576656..576760,577312..577374,579557..583442)
location: region:519430-583442:1
so has part: feature:519430-519593:1:exon
so has part: feature:564078-564202:1:exon
so has part: feature:570983-571052:1:exon
so has part: feature:573843-573913:1:exon
so has part: feature:575607-575714:1:exon
so has part: feature:576656-576760:1:exon
so has part: feature:577312-577374:1:exon
so has part: feature:579557-583442:1:exon

position:519430:1
position: 519430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519430-519593:1:exon

position:519593:1
position: 519593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:564078-564202:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:570983-571052:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:573843-573913:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:575607-575714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:576656-576760:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:577312-577374:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:579557-583442:1:exon

KCNIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: KCNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Kv channel-interacting protein 1 isoform X1
translation: MWTKGESEGLQTLGIAVVVCSSLKLLHYLGLIDLSDDKIEDELEMTTVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASMYAHYLFNAFDTAQNGSVKFEDFVMALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDAPRQHVEVFFQKMDKNKDGVVTLDEFIESCQEDDNIMRSLQLFENVM
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(519485..519593,564078..564202,570983..571052,573843..573913,575607..575714,576656..576760,577312..577374,579557..579604)
location: region:519485-579604:1
so has part: feature:519485-519593:1:exon
so has part: feature:564078-564202:1:exon
so has part: feature:570983-571052:1:exon
so has part: feature:573843-573913:1:exon
so has part: feature:575607-575714:1:exon
so has part: feature:576656-576760:1:exon
so has part: feature:577312-577374:1:exon
so has part: feature:579557-579604:1:exon

XP_032558626.1
type: Protein
SIO_000068: ncbiprotein

position:519485:1
position: 519485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519485-519593:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564078-564202:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:570983-571052:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:573843-573913:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:575607-575714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:576656-576760:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:577312-577374:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:579557-579604:1:exon

KCNIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: KCNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Kv channel-interacting protein 1 isoform X6
translation: MTTVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASMYAHYLFNAFDTAQNGSVKFEDFVMALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDAPRQHVEVFFQKMDKNKDGVVTLDEFIESCQEDDNIMRSLQLFENVM
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(564101..564202,570983..571052,573843..573913,575607..575714,576656..576760,577312..577374,579557..579604)
location: region:564101-579604:1
so has part: feature:564101-564202:1:exon
so has part: feature:570983-571052:1:exon
so has part: feature:573843-573913:1:exon
so has part: feature:575607-575714:1:exon
so has part: feature:576656-576760:1:exon
so has part: feature:577312-577374:1:exon
so has part: feature:579557-579604:1:exon

XP_032558632.1
type: Protein
SIO_000068: ncbiprotein

position:564101:1
position: 564101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:564101-564202:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:570983-571052:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:573843-573913:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:575607-575714:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576656-576760:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:577312-577374:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:579557-579604:1:exon

KCNIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: KCNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Kv channel-interacting protein 1 isoform X6
translation: MTTVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASMYAHYLFNAFDTAQNGSVKFEDFVMALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDAPRQHVEVFFQKMDKNKDGVVTLDEFIESCQEDDNIMRSLQLFENVM
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(564101..564202,570983..571052,573843..573913,575607..575714,576656..576760,577312..577374,579557..579604)
location: region:564101-579604:1
so has part: feature:564101-564202:1:exon
so has part: feature:570983-571052:1:exon
so has part: feature:573843-573913:1:exon
so has part: feature:575607-575714:1:exon
so has part: feature:576656-576760:1:exon
so has part: feature:577312-577374:1:exon
so has part: feature:579557-579604:1:exon

XP_032558633.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:564101-564202:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:570983-571052:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:573843-573913:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:575607-575714:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576656-576760:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:577312-577374:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:579557-579604:1:exon

KCNIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: KCNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Kv channel-interacting protein 1 isoform X6
translation: MTTVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASMYAHYLFNAFDTAQNGSVKFEDFVMALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDAPRQHVEVFFQKMDKNKDGVVTLDEFIESCQEDDNIMRSLQLFENVM
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(564101..564202,570983..571052,573843..573913,575607..575714,576656..576760,577312..577374,579557..579604)
location: region:564101-579604:1
so has part: feature:564101-564202:1:exon
so has part: feature:570983-571052:1:exon
so has part: feature:573843-573913:1:exon
so has part: feature:575607-575714:1:exon
so has part: feature:576656-576760:1:exon
so has part: feature:577312-577374:1:exon
so has part: feature:579557-579604:1:exon

XP_032558634.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:564101-564202:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:570983-571052:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:573843-573913:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:575607-575714:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576656-576760:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:577312-577374:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:579557-579604:1:exon

KCNIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: KCNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Kv channel-interacting protein 1 isoform X6
translation: MTTVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASMYAHYLFNAFDTAQNGSVKFEDFVMALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDAPRQHVEVFFQKMDKNKDGVVTLDEFIESCQEDDNIMRSLQLFENVM
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(564101..564202,570983..571052,573843..573913,575607..575714,576656..576760,577312..577374,579557..579604)
location: region:564101-579604:1
so has part: feature:564101-564202:1:exon
so has part: feature:570983-571052:1:exon
so has part: feature:573843-573913:1:exon
so has part: feature:575607-575714:1:exon
so has part: feature:576656-576760:1:exon
so has part: feature:577312-577374:1:exon
so has part: feature:579557-579604:1:exon

XP_032558635.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:564101-564202:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:570983-571052:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:573843-573913:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:575607-575714:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576656-576760:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:577312-577374:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:579557-579604:1:exon

KCNIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: KCNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Kv channel-interacting protein 1 isoform X6
translation: MTTVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASMYAHYLFNAFDTAQNGSVKFEDFVMALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDAPRQHVEVFFQKMDKNKDGVVTLDEFIESCQEDDNIMRSLQLFENVM
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(564101..564202,570983..571052,573843..573913,575607..575714,576656..576760,577312..577374,579557..579604)
location: region:564101-579604:1
so has part: feature:564101-564202:1:exon
so has part: feature:570983-571052:1:exon
so has part: feature:573843-573913:1:exon
so has part: feature:575607-575714:1:exon
so has part: feature:576656-576760:1:exon
so has part: feature:577312-577374:1:exon
so has part: feature:579557-579604:1:exon

XP_032558636.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:564101-564202:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:570983-571052:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:573843-573913:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:575607-575714:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576656-576760:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:577312-577374:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:579557-579604:1:exon

KCNIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: KCNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Kv channel-interacting protein 1 isoform X6
translation: MTTVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASMYAHYLFNAFDTAQNGSVKFEDFVMALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDAPRQHVEVFFQKMDKNKDGVVTLDEFIESCQEDDNIMRSLQLFENVM
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(564101..564202,570983..571052,573843..573913,575607..575714,576656..576760,577312..577374,579557..579604)
location: region:564101-579604:1
so has part: feature:564101-564202:1:exon
so has part: feature:570983-571052:1:exon
so has part: feature:573843-573913:1:exon
so has part: feature:575607-575714:1:exon
so has part: feature:576656-576760:1:exon
so has part: feature:577312-577374:1:exon
so has part: feature:579557-579604:1:exon

XP_032558638.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:564101-564202:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:570983-571052:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:573843-573913:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:575607-575714:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576656-576760:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:577312-577374:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:579557-579604:1:exon

KCNIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: KCNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Kv channel-interacting protein 1 isoform X6
translation: MTTVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASMYAHYLFNAFDTAQNGSVKFEDFVMALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDAPRQHVEVFFQKMDKNKDGVVTLDEFIESCQEDDNIMRSLQLFENVM
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(564101..564202,570983..571052,573843..573913,575607..575714,576656..576760,577312..577374,579557..579604)
location: region:564101-579604:1
so has part: feature:564101-564202:1:exon
so has part: feature:570983-571052:1:exon
so has part: feature:573843-573913:1:exon
so has part: feature:575607-575714:1:exon
so has part: feature:576656-576760:1:exon
so has part: feature:577312-577374:1:exon
so has part: feature:579557-579604:1:exon

XP_032558639.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:564101-564202:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:570983-571052:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:573843-573913:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:575607-575714:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576656-576760:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:577312-577374:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:579557-579604:1:exon

KCNIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: KCNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Kv channel-interacting protein 1 isoform X6
translation: MTTVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASMYAHYLFNAFDTAQNGSVKFEDFVMALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDAPRQHVEVFFQKMDKNKDGVVTLDEFIESCQEDDNIMRSLQLFENVM
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(564101..564202,570983..571052,573843..573913,575607..575714,576656..576760,577312..577374,579557..579604)
location: region:564101-579604:1
so has part: feature:564101-564202:1:exon
so has part: feature:570983-571052:1:exon
so has part: feature:573843-573913:1:exon
so has part: feature:575607-575714:1:exon
so has part: feature:576656-576760:1:exon
so has part: feature:577312-577374:1:exon
so has part: feature:579557-579604:1:exon

XP_032558640.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:564101-564202:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:570983-571052:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:573843-573913:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:575607-575714:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576656-576760:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:577312-577374:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:579557-579604:1:exon

KCNIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: KCNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Kv channel-interacting protein 1 isoform X6
translation: MTTVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASMYAHYLFNAFDTAQNGSVKFEDFVMALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDAPRQHVEVFFQKMDKNKDGVVTLDEFIESCQEDDNIMRSLQLFENVM
SIO_010081: KCNIP1
subclass of: SO_0000673
so part of: KCNIP1
location: join(564101..564202,570983..571052,573843..573913,575607..575714,576656..576760,577312..577374,579557..579604)
location: region:564101-579604:1
so has part: feature:564101-564202:1:exon
so has part: feature:570983-571052:1:exon
so has part: feature:573843-573913:1:exon
so has part: feature:575607-575714:1:exon
so has part: feature:576656-576760:1:exon
so has part: feature:577312-577374:1:exon
so has part: feature:579557-579604:1:exon

XP_032558641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:564101-564202:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:570983-571052:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:573843-573913:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:575607-575714:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576656-576760:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:577312-577374:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:579557-579604:1:exon

GABRP
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: GABRP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 605091..624853
location: region:605091-624853:1
so has part: feature:605091-624853:1:exon
subclass of: SO_0000010

116794550
type: Gene
SIO_000068: ncbigene

position:605091:1
position: 605091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:624853:1
position: 624853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605091-624853:1:exon

GABRP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: GABRP
product: gamma-aminobutyric acid type A receptor subunit pi, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032703298.1
SIO_010081: GABRP
subclass of: SO_0000673
so part of: GABRP
location: join(605091..605460,610375..610464,611808..611920,614208..614275,616607..616824,617672..617754,619911..620048,621072..621224,621734..621927,622858..624853)
location: region:605091-624853:1
so has part: feature:605091-605460:1:exon
so has part: feature:610375-610464:1:exon
so has part: feature:611808-611920:1:exon
so has part: feature:614208-614275:1:exon
so has part: feature:616607-616824:1:exon
so has part: feature:617672-617754:1:exon
so has part: feature:619911-620048:1:exon
so has part: feature:621072-621224:1:exon
so has part: feature:621734-621927:1:exon
so has part: feature:622858-624853:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:605091-605460:1:exon

position:605460:1
position: 605460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:610375-610464:1:exon

position:610375:1
position: 610375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:610464:1
position: 610464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:611808-611920:1:exon

position:611808:1
position: 611808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611920:1
position: 611920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:614208-614275:1:exon

position:614208:1
position: 614208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614275:1
position: 614275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:616607-616824:1:exon

position:616607:1
position: 616607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:616824:1
position: 616824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:617672-617754:1:exon

position:617672:1
position: 617672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:617754:1
position: 617754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:619911-620048:1:exon

position:619911:1
position: 619911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:620048:1
position: 620048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:621072-621224:1:exon

position:621072:1
position: 621072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:621224:1
position: 621224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:621734-621927:1:exon

position:621734:1
position: 621734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:621927:1
position: 621927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:622858-624853:1:exon

position:622858:1
position: 622858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GABRP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: GABRP
product: gamma-aminobutyric acid type A receptor subunit pi, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032703301.1
SIO_010081: GABRP
subclass of: SO_0000673
so part of: GABRP
location: join(605091..605460,610375..610464,611808..611920,614208..614275,616607..616824,617672..617754,619911..620048,621072..621224,622858..622985)
location: region:605091-622985:1
so has part: feature:605091-605460:1:exon
so has part: feature:610375-610464:1:exon
so has part: feature:611808-611920:1:exon
so has part: feature:614208-614275:1:exon
so has part: feature:616607-616824:1:exon
so has part: feature:617672-617754:1:exon
so has part: feature:619911-620048:1:exon
so has part: feature:621072-621224:1:exon
so has part: feature:622858-622985:1:exon

position:622985:1
position: 622985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605091-605460:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:610375-610464:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:611808-611920:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:614208-614275:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:616607-616824:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:617672-617754:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:619911-620048:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:621072-621224:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:622858-622985:1:exon

GABRP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: GABRP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-aminobutyric acid receptor subunit pi isoform X1
translation: MKGMDVNAHTTKDTSRQAEQLQEQSLEMFCKYFSFFGLCLFLPTQRRCSLGHVSSLHSSDTTSLPGFENLTMGYNKYLRPYFGGEPVQIAMSLDIASISSVSESNMDYTATISLRQRWTDPRLVFHGNRSFTLDARLAELLWVPDTYVVESKRSFLHDVTVGNRLIRLFSNGTILYALRITTTVACNMDLSKYPMDTQTCRLQLESWGYDENDVTFTWLRGNDSVHGMEQLRLSQYTVERYYTLVSKSQQETGSYPRLILQFELRRNVLYFILETYVPSTLLVMLSWVSFWITLDSVPARTCIGVTTVLSMTTLMIGSRSSLSKTNCFIKAIDVYLGICFSFIFGALVEYAVAHYSSSQKCAAKVPQEGPANKITKEMEDVNITNILNNSITSYKEKISFTSIEISSDNVNCSDLTTKSHEKIKCVLRNKMHRIIGYFTIQNPGNVDHYSKLLFPLFFMLVNVFYWAYYLYF
SIO_010081: GABRP
subclass of: SO_0000673
so part of: GABRP
location: join(605414..605460,610375..610464,611808..611920,614208..614275,616607..616824,617672..617754,619911..620048,621072..621224,621734..621927,622858..623172)
location: region:605414-623172:1
so has part: feature:605414-605460:1:exon
so has part: feature:610375-610464:1:exon
so has part: feature:611808-611920:1:exon
so has part: feature:614208-614275:1:exon
so has part: feature:616607-616824:1:exon
so has part: feature:617672-617754:1:exon
so has part: feature:619911-620048:1:exon
so has part: feature:621072-621224:1:exon
so has part: feature:621734-621927:1:exon
so has part: feature:622858-623172:1:exon

XP_032559189.1
type: Protein
SIO_000068: ncbiprotein

position:605414:1
position: 605414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623172:1
position: 623172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605414-605460:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:610375-610464:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:611808-611920:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:614208-614275:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:616607-616824:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:617672-617754:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:619911-620048:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:621072-621224:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:621734-621927:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:622858-623172:1:exon

GABRP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: GABRP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-aminobutyric acid receptor subunit pi isoform X4
translation: MKGMDVNAHTTKDTSRQAEQLQEQSLEMFCKYFSFFGLCLFLPTQRRCSLGHVSSLHSSDTTSLPGFENLTMGYNKYLRPYFGGEPVQIAMSLDIASISSVSESNMDYTATISLRQRWTDPRLVFHGNRSFTLDARLAELLWVPDTYVVESKRSFLHDVTVGNRLIRLFSNGTILYALRITTTVACNMDLSKYPMDTQTCRLQLESWGYDENDVTFTWLRGNDSVHGMEQLRLSQYTVERYYTLVSKSQQETGSYPRLILQFELRRNVLYFILETYVPSTLLVMLSWVSFWITLDSVPARTCIGAGK
SIO_010081: GABRP
subclass of: SO_0000673
so part of: GABRP
location: join(605414..605460,610375..610464,611808..611920,614208..614275,616607..616824,617672..617754,619911..620048,621072..621224,622858..622871)
location: region:605414-622871:1
so has part: feature:605414-605460:1:exon
so has part: feature:610375-610464:1:exon
so has part: feature:611808-611920:1:exon
so has part: feature:614208-614275:1:exon
so has part: feature:616607-616824:1:exon
so has part: feature:617672-617754:1:exon
so has part: feature:619911-620048:1:exon
so has part: feature:621072-621224:1:exon
so has part: feature:622858-622871:1:exon

XP_032559192.1
type: Protein
SIO_000068: ncbiprotein

position:622871:1
position: 622871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605414-605460:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:610375-610464:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:611808-611920:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:614208-614275:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:616607-616824:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:617672-617754:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:619911-620048:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:621072-621224:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:622858-622871:1:exon

GABRP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: GABRP
product: gamma-aminobutyric acid type A receptor subunit pi, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032703299.1
SIO_010081: GABRP
subclass of: SO_0000673
so part of: GABRP
location: join(608872..610183,610375..610464,611808..611920,614208..614275,616607..616824,617672..617754,619911..620048,621072..621224,621734..621927,622858..624853)
location: region:608872-624853:1
so has part: feature:608872-610183:1:exon
so has part: feature:610375-610464:1:exon
so has part: feature:611808-611920:1:exon
so has part: feature:614208-614275:1:exon
so has part: feature:616607-616824:1:exon
so has part: feature:617672-617754:1:exon
so has part: feature:619911-620048:1:exon
so has part: feature:621072-621224:1:exon
so has part: feature:621734-621927:1:exon
so has part: feature:622858-624853:1:exon

position:608872:1
position: 608872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:608872-610183:1:exon

position:610183:1
position: 610183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:610375-610464:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:611808-611920:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:614208-614275:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:616607-616824:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:617672-617754:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:619911-620048:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:621072-621224:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:621734-621927:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:622858-624853:1:exon

GABRP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: GABRP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-aminobutyric acid receptor subunit pi isoform X2
translation: MFCKYFSFFGLCLFLPTQRRCSLGHVSSLHSSDTTSLPGFENLTMGYNKYLRPYFGGEPVQIAMSLDIASISSVSESNMDYTATISLRQRWTDPRLVFHGNRSFTLDARLAELLWVPDTYVVESKRSFLHDVTVGNRLIRLFSNGTILYALRITTTVACNMDLSKYPMDTQTCRLQLESWGYDENDVTFTWLRGNDSVHGMEQLRLSQYTVERYYTLVSKSQQETGSYPRLILQFELRRNVLYFILETYVPSTLLVMLSWVSFWITLDSVPARTCIGVTTVLSMTTLMIGSRSSLSKTNCFIKAIDVYLGICFSFIFGALVEYAVAHYSSSQKCAAKVPQEGPANKITKEMEDVNITNILNNSITSYKEKISFTSIEISSDNVNCSDLTTKSHEKIKCVLRNKMHRIIGYFTIQNPGNVDHYSKLLFPLFFMLVNVFYWAYYLYF
SIO_010081: GABRP
subclass of: SO_0000673
so part of: GABRP
location: join(610409..610464,611808..611920,614208..614275,616607..616824,617672..617754,619911..620048,621072..621224,621734..621927,622858..623172)
location: region:610409-623172:1
so has part: feature:610409-610464:1:exon
so has part: feature:611808-611920:1:exon
so has part: feature:614208-614275:1:exon
so has part: feature:616607-616824:1:exon
so has part: feature:617672-617754:1:exon
so has part: feature:619911-620048:1:exon
so has part: feature:621072-621224:1:exon
so has part: feature:621734-621927:1:exon
so has part: feature:622858-623172:1:exon

XP_032559190.1
type: Protein
SIO_000068: ncbiprotein

position:610409:1
position: 610409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:610409-610464:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:611808-611920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:614208-614275:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:616607-616824:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617672-617754:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:619911-620048:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:621072-621224:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:621734-621927:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:622858-623172:1:exon

GABRP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: GABRP
product: gamma-aminobutyric acid type A receptor subunit pi, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032703300.1
SIO_010081: GABRP
subclass of: SO_0000673
so part of: GABRP
location: join(610441..610464,614208..614275,616607..616824,617672..617754,619911..620048,621072..621224,621734..621927,622858..624853)
location: region:610441-624853:1
so has part: feature:610441-610464:1:exon
so has part: feature:614208-614275:1:exon
so has part: feature:616607-616824:1:exon
so has part: feature:617672-617754:1:exon
so has part: feature:619911-620048:1:exon
so has part: feature:621072-621224:1:exon
so has part: feature:621734-621927:1:exon
so has part: feature:622858-624853:1:exon

position:610441:1
position: 610441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:610441-610464:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:614208-614275:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:616607-616824:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617672-617754:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:619911-620048:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:621072-621224:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:621734-621927:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:622858-624853:1:exon

GABRP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: GABRP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-aminobutyric acid receptor subunit pi isoform X3
translation: MSLDIASISSVSESNMDYTATISLRQRWTDPRLVFHGNRSFTLDARLAELLWVPDTYVVESKRSFLHDVTVGNRLIRLFSNGTILYALRITTTVACNMDLSKYPMDTQTCRLQLESWGYDENDVTFTWLRGNDSVHGMEQLRLSQYTVERYYTLVSKSQQETGSYPRLILQFELRRNVLYFILETYVPSTLLVMLSWVSFWITLDSVPARTCIGVTTVLSMTTLMIGSRSSLSKTNCFIKAIDVYLGICFSFIFGALVEYAVAHYSSSQKCAAKVPQEGPANKITKEMEDVNITNILNNSITSYKEKISFTSIEISSDNVNCSDLTTKSHEKIKCVLRNKMHRIIGYFTIQNPGNVDHYSKLLFPLFFMLVNVFYWAYYLYF
SIO_010081: GABRP
subclass of: SO_0000673
so part of: GABRP
location: join(614228..614275,616607..616824,617672..617754,619911..620048,621072..621224,621734..621927,622858..623172)
location: region:614228-623172:1
so has part: feature:614228-614275:1:exon
so has part: feature:616607-616824:1:exon
so has part: feature:617672-617754:1:exon
so has part: feature:619911-620048:1:exon
so has part: feature:621072-621224:1:exon
so has part: feature:621734-621927:1:exon
so has part: feature:622858-623172:1:exon

XP_032559191.1
type: Protein
SIO_000068: ncbiprotein

position:614228:1
position: 614228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614228-614275:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:616607-616824:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:617672-617754:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:619911-620048:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621072-621224:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:621734-621927:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:622858-623172:1:exon

LOC116794538
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794538
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 636031..649832
location: region:636031-649832:1
so has part: feature:636031-649832:1:exon
subclass of: SO_0000010

116794538
type: Gene
SIO_000068: ncbigene

position:636031:1
position: 636031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649832:1
position: 649832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:636031-649832:1:exon

LOC116794538
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794538
product: kazal-type serine protease inhibitor domain-containing protein 1-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032703278.1
SIO_010081: LOC116794538
subclass of: SO_0000673
so part of: LOC116794538
location: join(636031..636822,642190..642351,643959..644103,645469..649832)
location: region:636031-649832:1
so has part: feature:636031-636822:1:exon
so has part: feature:642190-642351:1:exon
so has part: feature:643959-644103:1:exon
so has part: feature:645469-649832:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:636031-636822:1:exon

position:636822:1
position: 636822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:642190-642351:1:exon

position:642190:1
position: 642190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:642351:1
position: 642351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:643959-644103:1:exon

position:643959:1
position: 643959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644103:1
position: 644103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:645469-649832:1:exon

position:645469:1
position: 645469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116794538
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794538
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: kazal-type serine protease inhibitor domain-containing protein 1-like
translation: MKHWMVTAVLIALVQVSQSFPALYHRGWWRLLREGDSCGKCDLTLCSEPKDCPAGTVLDRCGCCLECGNVEGQICDLDQGNHFYGQCGDDLECRLDADEARFGEVPEPQCVCKSQESICGPEGKTYENICQFNKAYAAKEYQHEHKGPCESAPVISMPPQDAQNYTGNDVIFGCEVSAYPMPHLEWKKKGNKMFLPGDDTHVSVQARGGPQKYGVTGWLQIQGLKKSDEGIYVCHTRNKYGATYASARLKVVDDPSVPFAFTAGSRSASYSIEYEDYYDNSDEEDDEEYESGDYDNGNNSE
SIO_010081: LOC116794538
subclass of: SO_0000673
so part of: LOC116794538
location: join(636369..636822,642190..642351,643959..644103,645469..645614)
location: region:636369-645614:1
so has part: feature:636369-636822:1:exon
so has part: feature:642190-642351:1:exon
so has part: feature:643959-644103:1:exon
so has part: feature:645469-645614:1:exon

XP_032559169.1
type: Protein
SIO_000068: ncbiprotein

position:636369:1
position: 636369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645614:1
position: 645614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:636369-636822:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:642190-642351:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:643959-644103:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:645469-645614:1:exon

LOC116794574
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794574
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 650183..665392
location: region:650183-665392:1
so has part: feature:650183-665392:1:exon
subclass of: SO_0000010

116794574
type: Gene
SIO_000068: ncbigene

position:650183:1
position: 650183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:665392:1
position: 665392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:650183-665392:1:exon

LOC116794574
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794574
product: ran-binding protein 17-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 84% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032703345.1
SIO_010081: LOC116794574
subclass of: SO_0000673
so part of: LOC116794574
location: join(650183..650250,659567..659631,660133..660237,665225..665392)
location: region:650183-665392:1
so has part: feature:650183-650250:1:exon
so has part: feature:659567-659631:1:exon
so has part: feature:660133-660237:1:exon
so has part: feature:665225-665392:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:650183-650250:1:exon

position:650250:1
position: 650250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:659567-659631:1:exon

position:659567:1
position: 659567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659631:1
position: 659631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:660133-660237:1:exon

position:660133:1
position: 660133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660237:1
position: 660237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:665225-665392:1:exon

position:665225:1
position: 665225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116794574
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794574
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ran-binding protein 17-like
translation: MLLSELIQEINLVDYSRPSAKHCKIAASFHDTSLKDILMLVCSLLKEHWEFAPNSVCYSVAKDGGSVPFVKTAEPHLLETYAPQIAKAYITSRLECVPQVVR
SIO_010081: LOC116794574
subclass of: SO_0000673
so part of: LOC116794574
location: join(659596..659631,660133..660237,665225..665392)
location: region:659596-665392:1
so has part: feature:659596-659631:1:exon
so has part: feature:660133-660237:1:exon
so has part: feature:665225-665392:1:exon

XP_032559236.1
type: Protein
SIO_000068: ncbiprotein

position:659596:1
position: 659596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:659596-659631:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:660133-660237:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:665225-665392:1:exon

LOC116794320
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794320
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 667383..677562
location: region:667383-677562:1
so has part: feature:667383-677562:1:exon
subclass of: SO_0000011

116794320
type: Gene
SIO_000068: ncbigene

position:667383:1
position: 667383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677562:1
position: 677562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:667383-677562:1:exon

LOC116794320
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116794320
product: uncharacterized LOC116794320
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004359753.1
SIO_010081: LOC116794320
subclass of: SO_0000673
so part of: LOC116794320
location: join(667383..667562,676240..677562)
location: region:667383-677562:1
so has part: feature:667383-667562:1:exon
so has part: feature:676240-677562:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:667383-667562:1:exon

position:667562:1
position: 667562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:676240-677562:1:exon

position:676240:1
position: 676240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116794318
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794318
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 726922..750573
location: region:726922-750573:1
so has part: feature:726922-750573:1:exon
subclass of: SO_0000011

116794318
type: Gene
SIO_000068: ncbigene

position:726922:1
position: 726922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:750573:1
position: 750573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:726922-750573:1:exon

LOC116794318
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116794318
product: uncharacterized LOC116794318
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004359751.1
SIO_010081: LOC116794318
subclass of: SO_0000673
so part of: LOC116794318
location: join(726922..727010,728224..728302,729345..729417,729921..730007,738304..738433,738535..738734,745316..745470,745553..745657,750107..750573)
location: region:726922-750573:1
so has part: feature:726922-727010:1:exon
so has part: feature:728224-728302:1:exon
so has part: feature:729345-729417:1:exon
so has part: feature:729921-730007:1:exon
so has part: feature:738304-738433:1:exon
so has part: feature:738535-738734:1:exon
so has part: feature:745316-745470:1:exon
so has part: feature:745553-745657:1:exon
so has part: feature:750107-750573:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:726922-727010:1:exon

position:727010:1
position: 727010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:728224-728302:1:exon

position:728224:1
position: 728224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:728302:1
position: 728302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:729345-729417:1:exon

position:729345:1
position: 729345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:729417:1
position: 729417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:729921-730007:1:exon

position:729921:1
position: 729921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730007:1
position: 730007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:738304-738433:1:exon

position:738304:1
position: 738304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:738433:1
position: 738433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:738535-738734:1:exon

position:738535:1
position: 738535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:738734:1
position: 738734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:745316-745470:1:exon

position:745316:1
position: 745316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:745470:1
position: 745470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:745553-745657:1:exon

position:745553:1
position: 745553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:745657:1
position: 745657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:750107-750573:1:exon

position:750107:1
position: 750107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116794319
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794319
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 772209..776640
location: region:772209-776640:1
so has part: feature:772209-776640:1:exon
subclass of: SO_0000011

116794319
type: Gene
SIO_000068: ncbigene

position:772209:1
position: 772209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:776640:1
position: 776640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:772209-776640:1:exon

LOC116794319
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116794319
product: uncharacterized LOC116794319
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004359752.1
SIO_010081: LOC116794319
subclass of: SO_0000673
so part of: LOC116794319
location: join(772209..772312,772747..772865,774634..776640)
location: region:772209-776640:1
so has part: feature:772209-772312:1:exon
so has part: feature:772747-772865:1:exon
so has part: feature:774634-776640:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:772209-772312:1:exon

position:772312:1
position: 772312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:772747-772865:1:exon

position:772747:1
position: 772747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:772865:1
position: 772865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:774634-776640:1:exon

position:774634:1
position: 774634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NPM1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: NPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 833510..845102
location: region:833510-845102:1
so has part: feature:833510-845102:1:exon
subclass of: SO_0000010

116794494
type: Gene
SIO_000068: ncbigene

position:833510:1
position: 833510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:845102:1
position: 845102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:833510-845102:1:exon

NPM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: NPM1
product: nucleophosmin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, 4 long SRA reads, 12 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032703185.1
SIO_010081: NPM1
subclass of: SO_0000673
so part of: NPM1
location: join(833510..833678,834304..834383,836080..836199,836983..837076,837816..837919,838455..838519,838996..839050,840186..840275,841739..841840,843714..843788,844746..845102)
location: region:833510-845102:1
so has part: feature:833510-833678:1:exon
so has part: feature:834304-834383:1:exon
so has part: feature:836080-836199:1:exon
so has part: feature:836983-837076:1:exon
so has part: feature:837816-837919:1:exon
so has part: feature:838455-838519:1:exon
so has part: feature:838996-839050:1:exon
so has part: feature:840186-840275:1:exon
so has part: feature:841739-841840:1:exon
so has part: feature:843714-843788:1:exon
so has part: feature:844746-845102:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:833510-833678:1:exon

position:833678:1
position: 833678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:834304-834383:1:exon

position:834304:1
position: 834304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:834383:1
position: 834383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:836080-836199:1:exon

position:836080:1
position: 836080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:836199:1
position: 836199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:836983-837076:1:exon

position:836983:1
position: 836983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:837076:1
position: 837076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:837816-837919:1:exon

position:837816:1
position: 837816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:837919:1
position: 837919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:838455-838519:1:exon

position:838455:1
position: 838455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:838519:1
position: 838519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:838996-839050:1:exon

position:838996:1
position: 838996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:839050:1
position: 839050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:840186-840275:1:exon

position:840186:1
position: 840186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:840275:1
position: 840275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:841739-841840:1:exon

position:841739:1
position: 841739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:841840:1
position: 841840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:843714-843788:1:exon

position:843714:1
position: 843714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:843788:1
position: 843788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:844746-845102:1:exon

position:844746:1
position: 844746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NPM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: NPM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleophosmin
translation: MEDSAMDMESMGPLRPQTFLFGCELKADKEYQFKVDDEENEHQLSLRTVTLGAGAKDELHVVEAEALDYEGNPTKVVLASLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVYVSGQHLVALEEEPESDEEEDDAKIVNASTKRPASGGGAKTPQKKPKLSEDDEDDDEDEDDDDDDDEDDLEDDEEEIKPPVKKPVREVSGKNMQKAKQNGKDSKPSTPASKSKTPDSKKDKTLTPKTPKVPLSLEEIKAKMQASVDKGTILPKLEPKFANYVKNCFRTEDQKVIQALWQWRQTL
SIO_010081: NPM1
subclass of: SO_0000673
so part of: NPM1
location: join(833615..833678,834304..834383,836080..836199,836983..837076,837816..837919,838455..838519,838996..839050,840186..840275,841739..841840,843714..843788,844746..844784)
location: region:833615-844784:1
so has part: feature:833615-833678:1:exon
so has part: feature:834304-834383:1:exon
so has part: feature:836080-836199:1:exon
so has part: feature:836983-837076:1:exon
so has part: feature:837816-837919:1:exon
so has part: feature:838455-838519:1:exon
so has part: feature:838996-839050:1:exon
so has part: feature:840186-840275:1:exon
so has part: feature:841739-841840:1:exon
so has part: feature:843714-843788:1:exon
so has part: feature:844746-844784:1:exon

XP_032559076.1
type: Protein
SIO_000068: ncbiprotein

position:833615:1
position: 833615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:844784:1
position: 844784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:833615-833678:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:834304-834383:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:836080-836199:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:836983-837076:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:837816-837919:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:838455-838519:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:838996-839050:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:840186-840275:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:841739-841840:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:843714-843788:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:844746-844784:1:exon

FGF18
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: FGF18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 856572..930748
location: region:856572-930748:1
so has part: feature:856572-930748:1:exon
subclass of: SO_0000010

116794311
type: Gene
SIO_000068: ncbigene

position:856572:1
position: 856572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:930748:1
position: 930748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:856572-930748:1:exon

FGF18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: FGF18
product: fibroblast growth factor 18, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032702897.1
SIO_010081: FGF18
subclass of: SO_0000673
so part of: FGF18
location: join(856572..856614,857409..857686,857974..858010,886634..886814,912232..912338,929727..930748)
location: region:856572-930748:1
so has part: feature:856572-856614:1:exon
so has part: feature:857409-857686:1:exon
so has part: feature:857974-858010:1:exon
so has part: feature:886634-886814:1:exon
so has part: feature:912232-912338:1:exon
so has part: feature:929727-930748:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:856572-856614:1:exon

position:856614:1
position: 856614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:857409-857686:1:exon

position:857409:1
position: 857409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:857686:1
position: 857686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:857974-858010:1:exon

position:857974:1
position: 857974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:858010:1
position: 858010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:886634-886814:1:exon

position:886634:1
position: 886634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:886814:1
position: 886814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:912232-912338:1:exon

position:912232:1
position: 912232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:912338:1
position: 912338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:929727-930748:1:exon

position:929727:1
position: 929727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGF18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: FGF18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 18 isoform X1
translation: MYSLLSTCTCLCLHFLLLCFQVQMFAAEENVDFRIHVENQTRARDDVSRKQLRLYQLYSRTSGKHIQVLGRRISAKGEDGDKYAQLLVETDTFGSQVRIKGKETDFYLCMNRKGKLVGKPDGTSKECVFIEKVLENNYTALMSAKYSGWYVGFTKKGRPRKGPKTRENQQDVHFMKRYPKGQVEIQKPFKYTTVTKRTKRIRPTNPS
SIO_010081: FGF18
subclass of: SO_0000673
so part of: FGF18
location: join(857655..857686,857974..858010,886634..886814,912232..912338,929727..929993)
location: region:857655-929993:1
so has part: feature:857655-857686:1:exon
so has part: feature:857974-858010:1:exon
so has part: feature:886634-886814:1:exon
so has part: feature:912232-912338:1:exon
so has part: feature:929727-929993:1:exon

XP_032558788.1
type: Protein
SIO_000068: ncbiprotein

position:857655:1
position: 857655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929993:1
position: 929993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:857655-857686:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:857974-858010:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:886634-886814:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:912232-912338:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:929727-929993:1:exon

FGF18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: FGF18
product: fibroblast growth factor 18, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032702898.1
SIO_010081: FGF18
subclass of: SO_0000673
so part of: FGF18
location: join(863323..863405,886634..886814,912232..912338,929727..930748)
location: region:863323-930748:1
so has part: feature:863323-863405:1:exon
so has part: feature:886634-886814:1:exon
so has part: feature:912232-912338:1:exon
so has part: feature:929727-930748:1:exon

position:863323:1
position: 863323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:863323-863405:1:exon

position:863405:1
position: 863405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:886634-886814:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:912232-912338:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:929727-930748:1:exon

FGF18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: FGF18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 18 isoform X2
translation: MQVLLHRAHRRSTCEMFAAEENVDFRIHVENQTRARDDVSRKQLRLYQLYSRTSGKHIQVLGRRISAKGEDGDKYAQLLVETDTFGSQVRIKGKETDFYLCMNRKGKLVGKPDGTSKECVFIEKVLENNYTALMSAKYSGWYVGFTKKGRPRKGPKTRENQQDVHFMKRYPKGQVEIQKPFKYTTVTKRTKRIRPTNPS
SIO_010081: FGF18
subclass of: SO_0000673
so part of: FGF18
location: join(863361..863405,886634..886814,912232..912338,929727..929993)
location: region:863361-929993:1
so has part: feature:863361-863405:1:exon
so has part: feature:886634-886814:1:exon
so has part: feature:912232-912338:1:exon
so has part: feature:929727-929993:1:exon

XP_032558789.1
type: Protein
SIO_000068: ncbiprotein

position:863361:1
position: 863361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:863361-863405:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:886634-886814:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:912232-912338:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:929727-929993:1:exon

FBXW11
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: FBXW11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1286244..1363673)
location: region:1286244-1363673:-1
so has part: feature:1286244-1363673:-1:exon
subclass of: SO_0000010

116794313
type: Gene
SIO_000068: ncbigene

position:1286244:-1
position: 1286244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1363673:-1
position: 1363673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1286244-1363673:-1:exon

FBXW11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: FBXW11
product: F-box and WD repeat domain containing 11, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 5 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032702902.1
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(1286244..1288651,1291954..1292142,1293577..1293655,1294581..1294691,1295273..1295391,1296825..1297074,1298028..1298146,1298718..1298855,1309953..1310043,1310814..1311000,1322780..1323005,1324040..1324102,1355554..1355633,1363561..1363673))
location: region:1286244-1363673:-1
so has part: feature:1363561-1363673:-1:exon
so has part: feature:1355554-1355633:-1:exon
so has part: feature:1324040-1324102:-1:exon
so has part: feature:1322780-1323005:-1:exon
so has part: feature:1310814-1311000:-1:exon
so has part: feature:1309953-1310043:-1:exon
so has part: feature:1298718-1298855:-1:exon
so has part: feature:1298028-1298146:-1:exon
so has part: feature:1296825-1297074:-1:exon
so has part: feature:1295273-1295391:-1:exon
so has part: feature:1294581-1294691:-1:exon
so has part: feature:1293577-1293655:-1:exon
so has part: feature:1291954-1292142:-1:exon
so has part: feature:1286244-1288651:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1363561-1363673:-1:exon

position:1363561:-1
position: 1363561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1355554-1355633:-1:exon

position:1355554:-1
position: 1355554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1355633:-1
position: 1355633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1324040-1324102:-1:exon

position:1324040:-1
position: 1324040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1324102:-1
position: 1324102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1322780-1323005:-1:exon

position:1322780:-1
position: 1322780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1323005:-1
position: 1323005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1310814-1311000:-1:exon

position:1310814:-1
position: 1310814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1311000:-1
position: 1311000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1309953-1310043:-1:exon

position:1309953:-1
position: 1309953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1310043:-1
position: 1310043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1298718-1298855:-1:exon

position:1298718:-1
position: 1298718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1298855:-1
position: 1298855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1298028-1298146:-1:exon

position:1298028:-1
position: 1298028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1298146:-1
position: 1298146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1296825-1297074:-1:exon

position:1296825:-1
position: 1296825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1297074:-1
position: 1297074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1295273-1295391:-1:exon

position:1295273:-1
position: 1295273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1295391:-1
position: 1295391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1294581-1294691:-1:exon

position:1294581:-1
position: 1294581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1294691:-1
position: 1294691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1293577-1293655:-1:exon

position:1293577:-1
position: 1293577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1293655:-1
position: 1293655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1291954-1292142:-1:exon

position:1291954:-1
position: 1291954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1292142:-1
position: 1292142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1286244-1288651:-1:exon

position:1288651:-1
position: 1288651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FBXW11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: FBXW11
product: F-box and WD repeat domain containing 11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 5 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032702900.1
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(1286244..1288651,1291954..1292142,1293577..1293655,1294581..1294691,1295273..1295391,1296825..1297074,1298028..1298146,1298718..1298855,1309953..1310043,1310814..1311000,1322780..1323005,1324040..1324102,1347967..1348068,1355554..1355633,1363561..1363673))
location: region:1286244-1363673:-1
so has part: feature:1363561-1363673:-1:exon
so has part: feature:1355554-1355633:-1:exon
so has part: feature:1347967-1348068:-1:exon
so has part: feature:1324040-1324102:-1:exon
so has part: feature:1322780-1323005:-1:exon
so has part: feature:1310814-1311000:-1:exon
so has part: feature:1309953-1310043:-1:exon
so has part: feature:1298718-1298855:-1:exon
so has part: feature:1298028-1298146:-1:exon
so has part: feature:1296825-1297074:-1:exon
so has part: feature:1295273-1295391:-1:exon
so has part: feature:1294581-1294691:-1:exon
so has part: feature:1293577-1293655:-1:exon
so has part: feature:1291954-1292142:-1:exon
so has part: feature:1286244-1288651:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1363561-1363673:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1355554-1355633:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1347967-1348068:-1:exon

position:1347967:-1
position: 1347967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1348068:-1
position: 1348068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1324040-1324102:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1322780-1323005:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1310814-1311000:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1309953-1310043:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1298718-1298855:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1298028-1298146:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1296825-1297074:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1295273-1295391:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1294581-1294691:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1293577-1293655:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1291954-1292142:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1286244-1288651:-1:exon

FBXW11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: FBXW11
product: F-box and WD repeat domain containing 11, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 5 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_032702901.1
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(1286244..1288651,1291954..1292142,1293577..1293655,1294581..1294691,1295273..1295391,1296825..1297074,1298028..1298146,1298718..1298855,1309953..1310043,1310814..1311000,1322780..1323005,1324040..1324102,1363561..1363665))
location: region:1286244-1363665:-1
so has part: feature:1363561-1363665:-1:exon
so has part: feature:1324040-1324102:-1:exon
so has part: feature:1322780-1323005:-1:exon
so has part: feature:1310814-1311000:-1:exon
so has part: feature:1309953-1310043:-1:exon
so has part: feature:1298718-1298855:-1:exon
so has part: feature:1298028-1298146:-1:exon
so has part: feature:1296825-1297074:-1:exon
so has part: feature:1295273-1295391:-1:exon
so has part: feature:1294581-1294691:-1:exon
so has part: feature:1293577-1293655:-1:exon
so has part: feature:1291954-1292142:-1:exon
so has part: feature:1286244-1288651:-1:exon

position:1363665:-1
position: 1363665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1363561-1363665:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1324040-1324102:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1322780-1323005:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1310814-1311000:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1309953-1310043:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1298718-1298855:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1298028-1298146:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1296825-1297074:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1295273-1295391:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1294581-1294691:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1293577-1293655:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1291954-1292142:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1286244-1288651:-1:exon

FBXW11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: FBXW11
product: F-box and WD repeat domain containing 11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 5 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032702899.1
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(1286244..1288651,1291954..1292142,1293577..1293655,1294581..1294691,1295273..1295391,1296825..1297074,1298028..1298146,1298718..1298855,1309953..1310043,1310814..1311000,1322780..1323005,1324040..1324102,1347967..1348068,1363561..1363660))
location: region:1286244-1363660:-1
so has part: feature:1363561-1363660:-1:exon
so has part: feature:1347967-1348068:-1:exon
so has part: feature:1324040-1324102:-1:exon
so has part: feature:1322780-1323005:-1:exon
so has part: feature:1310814-1311000:-1:exon
so has part: feature:1309953-1310043:-1:exon
so has part: feature:1298718-1298855:-1:exon
so has part: feature:1298028-1298146:-1:exon
so has part: feature:1296825-1297074:-1:exon
so has part: feature:1295273-1295391:-1:exon
so has part: feature:1294581-1294691:-1:exon
so has part: feature:1293577-1293655:-1:exon
so has part: feature:1291954-1292142:-1:exon
so has part: feature:1286244-1288651:-1:exon

position:1363660:-1
position: 1363660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1363561-1363660:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1347967-1348068:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1324040-1324102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1322780-1323005:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1310814-1311000:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1309953-1310043:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1298718-1298855:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1298028-1298146:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1296825-1297074:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1295273-1295391:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1294581-1294691:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1293577-1293655:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1291954-1292142:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1286244-1288651:-1:exon

FBXW11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: FBXW11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 11 isoform X3
translation: MEPDSVIEDKTIELMNTSVMEDQNEDESPKKNTLWQISNGTSSVIVSRKRPSEGNYEKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYISR
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(1291981..1292142,1293577..1293655,1294581..1294691,1295273..1295391,1296825..1297074,1298028..1298146,1298718..1298855,1309953..1310043,1310814..1311000,1322780..1323005,1324040..1324102,1363561..1363605))
location: region:1291981-1363605:-1
so has part: feature:1363561-1363605:-1:exon
so has part: feature:1324040-1324102:-1:exon
so has part: feature:1322780-1323005:-1:exon
so has part: feature:1310814-1311000:-1:exon
so has part: feature:1309953-1310043:-1:exon
so has part: feature:1298718-1298855:-1:exon
so has part: feature:1298028-1298146:-1:exon
so has part: feature:1296825-1297074:-1:exon
so has part: feature:1295273-1295391:-1:exon
so has part: feature:1294581-1294691:-1:exon
so has part: feature:1293577-1293655:-1:exon
so has part: feature:1291981-1292142:-1:exon

XP_032558792.1
type: Protein
SIO_000068: ncbiprotein

position:1291981:-1
position: 1291981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1363605:-1
position: 1363605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1363561-1363605:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1324040-1324102:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1322780-1323005:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1310814-1311000:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1309953-1310043:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1298718-1298855:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1298028-1298146:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1296825-1297074:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1295273-1295391:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1294581-1294691:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1293577-1293655:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1291981-1292142:-1:exon

FBXW11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: FBXW11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 11 isoform X1
translation: MEPDSVIEDKTIELMCSVPRSLWLGCSNLVESMCALRCLQSMPSVRCLQNTSVMEDQNEDESPKKNTLWQISNGTSSVIVSRKRPSEGNYEKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYISR
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(1291981..1292142,1293577..1293655,1294581..1294691,1295273..1295391,1296825..1297074,1298028..1298146,1298718..1298855,1309953..1310043,1310814..1311000,1322780..1323005,1324040..1324102,1347967..1348068,1363561..1363605))
location: region:1291981-1363605:-1
so has part: feature:1363561-1363605:-1:exon
so has part: feature:1347967-1348068:-1:exon
so has part: feature:1324040-1324102:-1:exon
so has part: feature:1322780-1323005:-1:exon
so has part: feature:1310814-1311000:-1:exon
so has part: feature:1309953-1310043:-1:exon
so has part: feature:1298718-1298855:-1:exon
so has part: feature:1298028-1298146:-1:exon
so has part: feature:1296825-1297074:-1:exon
so has part: feature:1295273-1295391:-1:exon
so has part: feature:1294581-1294691:-1:exon
so has part: feature:1293577-1293655:-1:exon
so has part: feature:1291981-1292142:-1:exon

XP_032558790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1363561-1363605:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1347967-1348068:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1324040-1324102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1322780-1323005:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1310814-1311000:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1309953-1310043:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1298718-1298855:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1298028-1298146:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1296825-1297074:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1295273-1295391:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1294581-1294691:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1293577-1293655:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1291981-1292142:-1:exon

FBXW11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: FBXW11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 11 isoform X2
translation: MCALRCLQSMPSVRCLQNTSVMEDQNEDESPKKNTLWQISNGTSSVIVSRKRPSEGNYEKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYISR
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(1291981..1292142,1293577..1293655,1294581..1294691,1295273..1295391,1296825..1297074,1298028..1298146,1298718..1298855,1309953..1310043,1310814..1311000,1322780..1323005,1324040..1324102,1347967..1348017))
location: region:1291981-1348017:-1
so has part: feature:1347967-1348017:-1:exon
so has part: feature:1324040-1324102:-1:exon
so has part: feature:1322780-1323005:-1:exon
so has part: feature:1310814-1311000:-1:exon
so has part: feature:1309953-1310043:-1:exon
so has part: feature:1298718-1298855:-1:exon
so has part: feature:1298028-1298146:-1:exon
so has part: feature:1296825-1297074:-1:exon
so has part: feature:1295273-1295391:-1:exon
so has part: feature:1294581-1294691:-1:exon
so has part: feature:1293577-1293655:-1:exon
so has part: feature:1291981-1292142:-1:exon

XP_032558791.1
type: Protein
SIO_000068: ncbiprotein

position:1348017:-1
position: 1348017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1347967-1348017:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1324040-1324102:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1322780-1323005:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1310814-1311000:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1309953-1310043:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1298718-1298855:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1298028-1298146:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1296825-1297074:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1295273-1295391:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1294581-1294691:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1293577-1293655:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1291981-1292142:-1:exon

FBXW11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: FBXW11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 11 isoform X4
translation: MEDQNEDESPKKNTLWQISNGTSSVIVSRKRPSEGNYEKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTYISR
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: complement(join(1291981..1292142,1293577..1293655,1294581..1294691,1295273..1295391,1296825..1297074,1298028..1298146,1298718..1298855,1309953..1310043,1310814..1311000,1322780..1323005,1324040..1324090))
location: region:1291981-1324090:-1
so has part: feature:1324040-1324090:-1:exon
so has part: feature:1322780-1323005:-1:exon
so has part: feature:1310814-1311000:-1:exon
so has part: feature:1309953-1310043:-1:exon
so has part: feature:1298718-1298855:-1:exon
so has part: feature:1298028-1298146:-1:exon
so has part: feature:1296825-1297074:-1:exon
so has part: feature:1295273-1295391:-1:exon
so has part: feature:1294581-1294691:-1:exon
so has part: feature:1293577-1293655:-1:exon
so has part: feature:1291981-1292142:-1:exon

XP_032558793.1
type: Protein
SIO_000068: ncbiprotein

position:1324090:-1
position: 1324090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1324040-1324090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1322780-1323005:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1310814-1311000:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1309953-1310043:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1298718-1298855:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1298028-1298146:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1296825-1297074:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1295273-1295391:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1294581-1294691:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1293577-1293655:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1291981-1292142:-1:exon

ETF1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: ETF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1377566..1404671)
location: region:1377566-1404671:-1
so has part: feature:1377566-1404671:-1:exon
subclass of: SO_0000010

116794357
type: Gene
SIO_000068: ncbigene

position:1377566:-1
position: 1377566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1404671:-1
position: 1404671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1377566-1404671:-1:exon

ETF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ETF1
product: eukaryotic translation termination factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 40 ESTs, 6 long SRA reads, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_032702966.1
SIO_010081: ETF1
subclass of: SO_0000673
so part of: ETF1
location: complement(join(1377566..1379595,1381132..1381279,1382445..1382509,1383065..1383220,1383574..1383703,1384223..1384413,1385260..1385398,1388734..1388873,1389627..1389802,1404542..1404671))
location: region:1377566-1404671:-1
so has part: feature:1404542-1404671:-1:exon
so has part: feature:1389627-1389802:-1:exon
so has part: feature:1388734-1388873:-1:exon
so has part: feature:1385260-1385398:-1:exon
so has part: feature:1384223-1384413:-1:exon
so has part: feature:1383574-1383703:-1:exon
so has part: feature:1383065-1383220:-1:exon
so has part: feature:1382445-1382509:-1:exon
so has part: feature:1381132-1381279:-1:exon
so has part: feature:1377566-1379595:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1404542-1404671:-1:exon

position:1404542:-1
position: 1404542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1389627-1389802:-1:exon

position:1389627:-1
position: 1389627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1389802:-1
position: 1389802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1388734-1388873:-1:exon

position:1388734:-1
position: 1388734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1388873:-1
position: 1388873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1385260-1385398:-1:exon

position:1385260:-1
position: 1385260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1385398:-1
position: 1385398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1384223-1384413:-1:exon

position:1384223:-1
position: 1384223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1384413:-1
position: 1384413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1383574-1383703:-1:exon

position:1383574:-1
position: 1383574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1383703:-1
position: 1383703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1383065-1383220:-1:exon

position:1383065:-1
position: 1383065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1383220:-1
position: 1383220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1382445-1382509:-1:exon

position:1382445:-1
position: 1382445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1382509:-1
position: 1382509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1381132-1381279:-1:exon

position:1381132:-1
position: 1381132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1381279:-1
position: 1381279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1377566-1379595:-1:exon

position:1379595:-1
position: 1379595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ETF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ETF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic peptide chain release factor subunit 1
translation: MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSDMFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALEMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGMEYQGGDDEFFDLDDY
SIO_010081: ETF1
subclass of: SO_0000673
so part of: ETF1
location: complement(join(1379513..1379595,1381132..1381279,1382445..1382509,1383065..1383220,1383574..1383703,1384223..1384413,1385260..1385398,1388734..1388873,1389627..1389802,1404542..1404627))
location: region:1379513-1404627:-1
so has part: feature:1404542-1404627:-1:exon
so has part: feature:1389627-1389802:-1:exon
so has part: feature:1388734-1388873:-1:exon
so has part: feature:1385260-1385398:-1:exon
so has part: feature:1384223-1384413:-1:exon
so has part: feature:1383574-1383703:-1:exon
so has part: feature:1383065-1383220:-1:exon
so has part: feature:1382445-1382509:-1:exon
so has part: feature:1381132-1381279:-1:exon
so has part: feature:1379513-1379595:-1:exon

XP_032558857.1
type: Protein
SIO_000068: ncbiprotein

position:1379513:-1
position: 1379513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1404627:-1
position: 1404627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1404542-1404627:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1389627-1389802:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1388734-1388873:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1385260-1385398:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1384223-1384413:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1383574-1383703:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1383065-1383220:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1382445-1382509:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1381132-1381279:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1379513-1379595:-1:exon

HSPA9
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: HSPA9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1410070..1432280)
location: region:1410070-1432280:-1
so has part: feature:1410070-1432280:-1:exon
subclass of: SO_0000010

116794243
type: Gene
SIO_000068: ncbigene

position:1410070:-1
position: 1410070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1432280:-1
position: 1432280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1410070-1432280:-1:exon

HSPA9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: HSPA9
product: heat shock protein family A (Hsp70) member 9, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 ESTs, 34 long SRA reads, 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_032702776.1
SIO_010081: HSPA9
subclass of: SO_0000673
so part of: HSPA9
location: complement(join(1410070..1410833,1411719..1411859,1413683..1413775,1415565..1415659,1417980..1418097,1419144..1419248,1420049..1420276,1422625..1422834,1424463..1424555,1425207..1425369,1426168..1426274,1426357..1426430,1428271..1428395,1428978..1429159,1429249..1429336,1430806..1430864,1432185..1432280))
location: region:1410070-1432280:-1
so has part: feature:1432185-1432280:-1:exon
so has part: feature:1430806-1430864:-1:exon
so has part: feature:1429249-1429336:-1:exon
so has part: feature:1428978-1429159:-1:exon
so has part: feature:1428271-1428395:-1:exon
so has part: feature:1426357-1426430:-1:exon
so has part: feature:1426168-1426274:-1:exon
so has part: feature:1425207-1425369:-1:exon
so has part: feature:1424463-1424555:-1:exon
so has part: feature:1422625-1422834:-1:exon
so has part: feature:1420049-1420276:-1:exon
so has part: feature:1419144-1419248:-1:exon
so has part: feature:1417980-1418097:-1:exon
so has part: feature:1415565-1415659:-1:exon
so has part: feature:1413683-1413775:-1:exon
so has part: feature:1411719-1411859:-1:exon
so has part: feature:1410070-1410833:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1432185-1432280:-1:exon

position:1432185:-1
position: 1432185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1430806-1430864:-1:exon

position:1430806:-1
position: 1430806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1430864:-1
position: 1430864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1429249-1429336:-1:exon

position:1429249:-1
position: 1429249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1429336:-1
position: 1429336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1428978-1429159:-1:exon

position:1428978:-1
position: 1428978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1429159:-1
position: 1429159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1428271-1428395:-1:exon

position:1428271:-1
position: 1428271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1428395:-1
position: 1428395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1426357-1426430:-1:exon

position:1426357:-1
position: 1426357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1426430:-1
position: 1426430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1426168-1426274:-1:exon

position:1426168:-1
position: 1426168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1426274:-1
position: 1426274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1425207-1425369:-1:exon

position:1425207:-1
position: 1425207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1425369:-1
position: 1425369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1424463-1424555:-1:exon

position:1424463:-1
position: 1424463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1424555:-1
position: 1424555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1422625-1422834:-1:exon

position:1422625:-1
position: 1422625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1422834:-1
position: 1422834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1420049-1420276:-1:exon

position:1420049:-1
position: 1420049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1420276:-1
position: 1420276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1419144-1419248:-1:exon

position:1419144:-1
position: 1419144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1419248:-1
position: 1419248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1417980-1418097:-1:exon

position:1417980:-1
position: 1417980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1418097:-1
position: 1418097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1415565-1415659:-1:exon

position:1415565:-1
position: 1415565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1415659:-1
position: 1415659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1413683-1413775:-1:exon

position:1413683:-1
position: 1413683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1413775:-1
position: 1413775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1411719-1411859:-1:exon

position:1411719:-1
position: 1411719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1411859:-1
position: 1411859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1410070-1410833:-1:exon

position:1410833:-1
position: 1410833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HSPA9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: HSPA9
product: heat shock protein family A (Hsp70) member 9, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 ESTs, 34 long SRA reads, 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032702777.1
SIO_010081: HSPA9
subclass of: SO_0000673
so part of: HSPA9
location: complement(join(1410070..1410833,1411719..1411859,1413683..1413775,1415565..1415659,1417980..1418097,1419144..1419248,1420049..1420276,1422625..1422834,1424463..1424555,1425207..1425369,1426168..1426274,1426357..1426430,1428271..1428395,1428978..1429159,1429249..1429336,1430806..1430864,1432050..1432088))
location: region:1410070-1432088:-1
so has part: feature:1432050-1432088:-1:exon
so has part: feature:1430806-1430864:-1:exon
so has part: feature:1429249-1429336:-1:exon
so has part: feature:1428978-1429159:-1:exon
so has part: feature:1428271-1428395:-1:exon
so has part: feature:1426357-1426430:-1:exon
so has part: feature:1426168-1426274:-1:exon
so has part: feature:1425207-1425369:-1:exon
so has part: feature:1424463-1424555:-1:exon
so has part: feature:1422625-1422834:-1:exon
so has part: feature:1420049-1420276:-1:exon
so has part: feature:1419144-1419248:-1:exon
so has part: feature:1417980-1418097:-1:exon
so has part: feature:1415565-1415659:-1:exon
so has part: feature:1413683-1413775:-1:exon
so has part: feature:1411719-1411859:-1:exon
so has part: feature:1410070-1410833:-1:exon

position:1432088:-1
position: 1432088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1432050-1432088:-1:exon

position:1432050:-1
position: 1432050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1430806-1430864:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1429249-1429336:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1428978-1429159:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1428271-1428395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1426357-1426430:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1426168-1426274:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1425207-1425369:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1424463-1424555:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1422625-1422834:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1420049-1420276:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1419144-1419248:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1417980-1418097:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1415565-1415659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1413683-1413775:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1411719-1411859:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1410070-1410833:-1:exon

HSPA9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: HSPA9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stress-70 protein, mitochondrial isoform X1
translation: MLSASRAATLPLRRARARPAHPAPRAQTFWNGLSQNVLRAASIRRYASEAIKGAVIGIDLGTTNSCVAVMEGKQAKVLENSEGARTTPSVVAFSADGERLVGMPAKRQAVTNPHNTFYATKRLIGRRFDDSEVKKDIKNVPFKIVRASNGDAWVEAHGKLYSPSQIGAFVLMKMKETAENYLGHAAKNAVITVPAYFNDSQRQATKDAGQIAGLNVLRVINEPTAAALAYGLDKSEDKVIAVYDLGGGTFDISVLEIQKGVFEVKSTNGDTFLGGEDFDQALLQHIVKEFKRETGVDLTKDNMALQRVREASEKAKCELSSSVQTDINLPYLTMDASGPKHLNMKLTRAQFEGIVADLIKRTVAPCQKAMQDAEVSKSDIGEVILVGGMTRMPKVQQTVQELFGRAPSKAVNPDEAVAIGAAIQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMASDNKLLGQFTLVGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSSGGLSKDEIENMVKNAEKYAEEDRRRKERVEAVNMAEGIIHDTESKMEEFKDQLPADECNKLKEEIAKMRELLARKDSETGENIRQAATSLQQASLKLFEMAYKKMASEREGSGSSGDQKEEKQ
SIO_010081: HSPA9
subclass of: SO_0000673
so part of: HSPA9
location: complement(join(1410774..1410833,1411719..1411859,1413683..1413775,1415565..1415659,1417980..1418097,1419144..1419248,1420049..1420276,1422625..1422834,1424463..1424555,1425207..1425369,1426168..1426274,1426357..1426430,1428271..1428395,1428978..1429159,1429249..1429336,1430806..1430864,1432185..1432265))
location: region:1410774-1432265:-1
so has part: feature:1432185-1432265:-1:exon
so has part: feature:1430806-1430864:-1:exon
so has part: feature:1429249-1429336:-1:exon
so has part: feature:1428978-1429159:-1:exon
so has part: feature:1428271-1428395:-1:exon
so has part: feature:1426357-1426430:-1:exon
so has part: feature:1426168-1426274:-1:exon
so has part: feature:1425207-1425369:-1:exon
so has part: feature:1424463-1424555:-1:exon
so has part: feature:1422625-1422834:-1:exon
so has part: feature:1420049-1420276:-1:exon
so has part: feature:1419144-1419248:-1:exon
so has part: feature:1417980-1418097:-1:exon
so has part: feature:1415565-1415659:-1:exon
so has part: feature:1413683-1413775:-1:exon
so has part: feature:1411719-1411859:-1:exon
so has part: feature:1410774-1410833:-1:exon

XP_032558667.1
type: Protein
SIO_000068: ncbiprotein

position:1410774:-1
position: 1410774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1432265:-1
position: 1432265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1432185-1432265:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1430806-1430864:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1429249-1429336:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1428978-1429159:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1428271-1428395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1426357-1426430:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1426168-1426274:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1425207-1425369:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1424463-1424555:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1422625-1422834:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1420049-1420276:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1419144-1419248:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1417980-1418097:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1415565-1415659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1413683-1413775:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1411719-1411859:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1410774-1410833:-1:exon

HSPA9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: HSPA9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stress-70 protein, mitochondrial isoform X2
translation: MLWGHRGATFWNGLSQNVLRAASIRRYASEAIKGAVIGIDLGTTNSCVAVMEGKQAKVLENSEGARTTPSVVAFSADGERLVGMPAKRQAVTNPHNTFYATKRLIGRRFDDSEVKKDIKNVPFKIVRASNGDAWVEAHGKLYSPSQIGAFVLMKMKETAENYLGHAAKNAVITVPAYFNDSQRQATKDAGQIAGLNVLRVINEPTAAALAYGLDKSEDKVIAVYDLGGGTFDISVLEIQKGVFEVKSTNGDTFLGGEDFDQALLQHIVKEFKRETGVDLTKDNMALQRVREASEKAKCELSSSVQTDINLPYLTMDASGPKHLNMKLTRAQFEGIVADLIKRTVAPCQKAMQDAEVSKSDIGEVILVGGMTRMPKVQQTVQELFGRAPSKAVNPDEAVAIGAAIQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMASDNKLLGQFTLVGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSSGGLSKDEIENMVKNAEKYAEEDRRRKERVEAVNMAEGIIHDTESKMEEFKDQLPADECNKLKEEIAKMRELLARKDSETGENIRQAATSLQQASLKLFEMAYKKMASEREGSGSSGDQKEEKQ
SIO_010081: HSPA9
subclass of: SO_0000673
so part of: HSPA9
location: complement(join(1410774..1410833,1411719..1411859,1413683..1413775,1415565..1415659,1417980..1418097,1419144..1419248,1420049..1420276,1422625..1422834,1424463..1424555,1425207..1425369,1426168..1426274,1426357..1426430,1428271..1428395,1428978..1429159,1429249..1429336,1430806..1430864,1432050..1432073))
location: region:1410774-1432073:-1
so has part: feature:1432050-1432073:-1:exon
so has part: feature:1430806-1430864:-1:exon
so has part: feature:1429249-1429336:-1:exon
so has part: feature:1428978-1429159:-1:exon
so has part: feature:1428271-1428395:-1:exon
so has part: feature:1426357-1426430:-1:exon
so has part: feature:1426168-1426274:-1:exon
so has part: feature:1425207-1425369:-1:exon
so has part: feature:1424463-1424555:-1:exon
so has part: feature:1422625-1422834:-1:exon
so has part: feature:1420049-1420276:-1:exon
so has part: feature:1419144-1419248:-1:exon
so has part: feature:1417980-1418097:-1:exon
so has part: feature:1415565-1415659:-1:exon
so has part: feature:1413683-1413775:-1:exon
so has part: feature:1411719-1411859:-1:exon
so has part: feature:1410774-1410833:-1:exon

XP_032558668.1
type: Protein
SIO_000068: ncbiprotein

position:1432073:-1
position: 1432073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1432050-1432073:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1430806-1430864:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1429249-1429336:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1428978-1429159:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1428271-1428395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1426357-1426430:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1426168-1426274:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1425207-1425369:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1424463-1424555:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1422625-1422834:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1420049-1420276:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1419144-1419248:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1417980-1418097:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1415565-1415659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1413683-1413775:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1411719-1411859:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1410774-1410833:-1:exon

LOC116794622
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794622
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1419728..1419799)
location: region:1419728-1419799:-1
so has part: feature:1419728-1419799:-1:exon
subclass of: SO_0000578

116794622
type: Gene
SIO_000068: ncbigene

position:1419728:-1
position: 1419728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1419799:-1
position: 1419799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1419728-1419799:-1:exon

LOC116794622
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: snoRNA
gene: LOC116794622
product: small nucleolar RNA SNORD63
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00154
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004359830.1
SIO_010081: LOC116794622
subclass of: SO_0000673
so part of: LOC116794622
location: complement(1419728..1419799)
location: region:1419728-1419799:-1
so has part: feature:1419728-1419799:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1419728-1419799:-1:exon

CTNNA1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: CTNNA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1565063..1684769
location: region:1565063-1684769:1
so has part: feature:1565063-1684769:1:exon
subclass of: SO_0000010

116794252
type: Gene
SIO_000068: ncbigene

position:1565063:1
position: 1565063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1684769:1
position: 1684769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1565063-1684769:1:exon

CTNNA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: CTNNA1
product: catenin alpha 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 50 ESTs, 12 long SRA reads, 35 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032702792.1
SIO_010081: CTNNA1
subclass of: SO_0000673
so part of: CTNNA1
location: join(1565063..1565195,1581173..1581279,1583114..1583309,1589969..1590135,1591102..1591221,1593057..1593323,1596385..1596588,1634284..1634364,1635156..1635308,1651745..1651837,1662652..1662808,1668175..1668375,1669445..1669596,1672346..1672456,1673901..1674082,1674827..1674932,1680739..1680873,1683643..1684769)
location: region:1565063-1684769:1
so has part: feature:1565063-1565195:1:exon
so has part: feature:1581173-1581279:1:exon
so has part: feature:1583114-1583309:1:exon
so has part: feature:1589969-1590135:1:exon
so has part: feature:1591102-1591221:1:exon
so has part: feature:1593057-1593323:1:exon
so has part: feature:1596385-1596588:1:exon
so has part: feature:1634284-1634364:1:exon
so has part: feature:1635156-1635308:1:exon
so has part: feature:1651745-1651837:1:exon
so has part: feature:1662652-1662808:1:exon
so has part: feature:1668175-1668375:1:exon
so has part: feature:1669445-1669596:1:exon
so has part: feature:1672346-1672456:1:exon
so has part: feature:1673901-1674082:1:exon
so has part: feature:1674827-1674932:1:exon
so has part: feature:1680739-1680873:1:exon
so has part: feature:1683643-1684769:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1565063-1565195:1:exon

position:1565195:1
position: 1565195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1581173-1581279:1:exon

position:1581173:1
position: 1581173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1581279:1
position: 1581279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1583114-1583309:1:exon

position:1583114:1
position: 1583114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1583309:1
position: 1583309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1589969-1590135:1:exon

position:1589969:1
position: 1589969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1590135:1
position: 1590135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1591102-1591221:1:exon

position:1591102:1
position: 1591102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1591221:1
position: 1591221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1593057-1593323:1:exon

position:1593057:1
position: 1593057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1593323:1
position: 1593323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1596385-1596588:1:exon

position:1596385:1
position: 1596385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1596588:1
position: 1596588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1634284-1634364:1:exon

position:1634284:1
position: 1634284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1634364:1
position: 1634364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1635156-1635308:1:exon

position:1635156:1
position: 1635156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1635308:1
position: 1635308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1651745-1651837:1:exon

position:1651745:1
position: 1651745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1651837:1
position: 1651837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1662652-1662808:1:exon

position:1662652:1
position: 1662652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1662808:1
position: 1662808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1668175-1668375:1:exon

position:1668175:1
position: 1668175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1668375:1
position: 1668375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1669445-1669596:1:exon

position:1669445:1
position: 1669445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1669596:1
position: 1669596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1672346-1672456:1:exon

position:1672346:1
position: 1672346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1672456:1
position: 1672456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1673901-1674082:1:exon

position:1673901:1
position: 1673901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1674082:1
position: 1674082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1674827-1674932:1:exon

position:1674827:1
position: 1674827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1674932:1
position: 1674932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1680739-1680873:1:exon

position:1680739:1
position: 1680739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1680873:1
position: 1680873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1683643-1684769:1:exon

position:1683643:1
position: 1683643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CTNNA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: CTNNA1
product: catenin alpha 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 50 ESTs, 10 long SRA reads, 35 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032702794.1
SIO_010081: CTNNA1
subclass of: SO_0000673
so part of: CTNNA1
location: join(1565063..1565195,1572077..1572190,1581173..1581279,1583114..1583309,1589969..1590135,1591102..1591221,1593057..1593323,1596385..1596588,1634284..1634364,1635156..1635308,1651745..1651837,1662652..1662808,1668175..1668375,1669445..1669596,1672346..1672456,1673901..1674082,1674827..1674932,1680739..1680873,1683643..1684236)
location: region:1565063-1684236:1
so has part: feature:1565063-1565195:1:exon
so has part: feature:1572077-1572190:1:exon
so has part: feature:1581173-1581279:1:exon
so has part: feature:1583114-1583309:1:exon
so has part: feature:1589969-1590135:1:exon
so has part: feature:1591102-1591221:1:exon
so has part: feature:1593057-1593323:1:exon
so has part: feature:1596385-1596588:1:exon
so has part: feature:1634284-1634364:1:exon
so has part: feature:1635156-1635308:1:exon
so has part: feature:1651745-1651837:1:exon
so has part: feature:1662652-1662808:1:exon
so has part: feature:1668175-1668375:1:exon
so has part: feature:1669445-1669596:1:exon
so has part: feature:1672346-1672456:1:exon
so has part: feature:1673901-1674082:1:exon
so has part: feature:1674827-1674932:1:exon
so has part: feature:1680739-1680873:1:exon
so has part: feature:1683643-1684236:1:exon

position:1684236:1
position: 1684236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1565063-1565195:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1572077-1572190:1:exon

position:1572077:1
position: 1572077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1572190:1
position: 1572190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1581173-1581279:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1583114-1583309:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1589969-1590135:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1591102-1591221:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1593057-1593323:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1596385-1596588:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1634284-1634364:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1635156-1635308:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1651745-1651837:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1662652-1662808:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1668175-1668375:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1669445-1669596:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1672346-1672456:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1673901-1674082:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1674827-1674932:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1680739-1680873:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1683643-1684236:1:exon

CTNNA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: CTNNA1
product: catenin alpha 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 50 ESTs, 9 long SRA reads, 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032702793.1
SIO_010081: CTNNA1
subclass of: SO_0000673
so part of: CTNNA1
location: join(1565081..1565195,1572080..1572190,1581173..1581279,1583114..1583309,1589969..1590135,1591102..1591221,1593057..1593323,1596385..1596588,1634284..1634364,1635156..1635308,1651745..1651837,1662652..1662808,1668175..1668375,1669445..1669596,1672346..1672456,1673901..1674082,1674827..1674932,1680739..1680873,1683643..1684236)
location: region:1565081-1684236:1
so has part: feature:1565081-1565195:1:exon
so has part: feature:1572080-1572190:1:exon
so has part: feature:1581173-1581279:1:exon
so has part: feature:1583114-1583309:1:exon
so has part: feature:1589969-1590135:1:exon
so has part: feature:1591102-1591221:1:exon
so has part: feature:1593057-1593323:1:exon
so has part: feature:1596385-1596588:1:exon
so has part: feature:1634284-1634364:1:exon
so has part: feature:1635156-1635308:1:exon
so has part: feature:1651745-1651837:1:exon
so has part: feature:1662652-1662808:1:exon
so has part: feature:1668175-1668375:1:exon
so has part: feature:1669445-1669596:1:exon
so has part: feature:1672346-1672456:1:exon
so has part: feature:1673901-1674082:1:exon
so has part: feature:1674827-1674932:1:exon
so has part: feature:1680739-1680873:1:exon
so has part: feature:1683643-1684236:1:exon

position:1565081:1
position: 1565081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1565081-1565195:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1572080-1572190:1:exon

position:1572080:1
position: 1572080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1581173-1581279:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1583114-1583309:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1589969-1590135:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1591102-1591221:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1593057-1593323:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1596385-1596588:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1634284-1634364:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1635156-1635308:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1651745-1651837:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1662652-1662808:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1668175-1668375:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1669445-1669596:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1672346-1672456:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1673901-1674082:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1674827-1674932:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1680739-1680873:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1683643-1684236:1:exon

CTNNA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: CTNNA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: catenin alpha-1
translation: MTAVTAANVNFKWDPKSLEIRTLAVERLLEPLVTQVTTLVNTSNKGPSNKKRGRSKKAHVLAASVEQATENFLEKGDKIAKESQFLKEELVAAVEDVRKQGDLMKSASGEFADDPCSSVKRGNMVRAARALLSAVTRLLILADMADVYKLLVQLKVVEDGILKLRNAGTEQDLGIQYKALKPEVDKLNIMAAKRQQELKDVGHRDQMAAARGILQKNVPILYTASQACLQHPDVAAYKANRDLIYKQLQQAVTGISNAAQATASDDTAQQQGGGGELAYALNNFDKQIIVDPSTFSEERFRPSLEERLESIISGAALMADSSCTRDDRRERIVAECNAVRQALQDLLSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKNGNEKEVKEYAQVFREHANKLIEVANLACSISNNEEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWERQVRVLTDAVDDITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNYEPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIRDIRKAVLMIRTPEELDDSDFETEDFDVRSRTSIQTEDDQLIAGQSARAIMAQLPQEQKAKIAEQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQNLGGELVVSGVDSAMSLIQAAKNLMNAVVQTVKASYVASTKYQKSQGMASLNLPAVSWKMKAPEKKPLVKREKQDETQTKIKRASQKKHVNPVQALSEFKAMESI
SIO_010081: CTNNA1
subclass of: SO_0000673
so part of: CTNNA1
location: join(1581175..1581279,1583114..1583309,1589969..1590135,1591102..1591221,1593057..1593323,1596385..1596588,1634284..1634364,1635156..1635308,1651745..1651837,1662652..1662808,1668175..1668375,1669445..1669596,1672346..1672456,1673901..1674082,1674827..1674932,1680739..1680873,1683643..1683930)
location: region:1581175-1683930:1
so has part: feature:1581175-1581279:1:exon
so has part: feature:1583114-1583309:1:exon
so has part: feature:1589969-1590135:1:exon
so has part: feature:1591102-1591221:1:exon
so has part: feature:1593057-1593323:1:exon
so has part: feature:1596385-1596588:1:exon
so has part: feature:1634284-1634364:1:exon
so has part: feature:1635156-1635308:1:exon
so has part: feature:1651745-1651837:1:exon
so has part: feature:1662652-1662808:1:exon
so has part: feature:1668175-1668375:1:exon
so has part: feature:1669445-1669596:1:exon
so has part: feature:1672346-1672456:1:exon
so has part: feature:1673901-1674082:1:exon
so has part: feature:1674827-1674932:1:exon
so has part: feature:1680739-1680873:1:exon
so has part: feature:1683643-1683930:1:exon

XP_032558683.1
type: Protein
SIO_000068: ncbiprotein

position:1581175:1
position: 1581175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1683930:1
position: 1683930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1581175-1581279:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1583114-1583309:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1589969-1590135:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1591102-1591221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1593057-1593323:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1596385-1596588:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1634284-1634364:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1635156-1635308:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1651745-1651837:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1662652-1662808:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1668175-1668375:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1669445-1669596:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1672346-1672456:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1673901-1674082:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1674827-1674932:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1680739-1680873:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1683643-1683930:1:exon

CTNNA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: CTNNA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: catenin alpha-1
translation: MTAVTAANVNFKWDPKSLEIRTLAVERLLEPLVTQVTTLVNTSNKGPSNKKRGRSKKAHVLAASVEQATENFLEKGDKIAKESQFLKEELVAAVEDVRKQGDLMKSASGEFADDPCSSVKRGNMVRAARALLSAVTRLLILADMADVYKLLVQLKVVEDGILKLRNAGTEQDLGIQYKALKPEVDKLNIMAAKRQQELKDVGHRDQMAAARGILQKNVPILYTASQACLQHPDVAAYKANRDLIYKQLQQAVTGISNAAQATASDDTAQQQGGGGELAYALNNFDKQIIVDPSTFSEERFRPSLEERLESIISGAALMADSSCTRDDRRERIVAECNAVRQALQDLLSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKNGNEKEVKEYAQVFREHANKLIEVANLACSISNNEEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWERQVRVLTDAVDDITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNYEPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIRDIRKAVLMIRTPEELDDSDFETEDFDVRSRTSIQTEDDQLIAGQSARAIMAQLPQEQKAKIAEQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQNLGGELVVSGVDSAMSLIQAAKNLMNAVVQTVKASYVASTKYQKSQGMASLNLPAVSWKMKAPEKKPLVKREKQDETQTKIKRASQKKHVNPVQALSEFKAMESI
SIO_010081: CTNNA1
subclass of: SO_0000673
so part of: CTNNA1
location: join(1581175..1581279,1583114..1583309,1589969..1590135,1591102..1591221,1593057..1593323,1596385..1596588,1634284..1634364,1635156..1635308,1651745..1651837,1662652..1662808,1668175..1668375,1669445..1669596,1672346..1672456,1673901..1674082,1674827..1674932,1680739..1680873,1683643..1683930)
location: region:1581175-1683930:1
so has part: feature:1581175-1581279:1:exon
so has part: feature:1583114-1583309:1:exon
so has part: feature:1589969-1590135:1:exon
so has part: feature:1591102-1591221:1:exon
so has part: feature:1593057-1593323:1:exon
so has part: feature:1596385-1596588:1:exon
so has part: feature:1634284-1634364:1:exon
so has part: feature:1635156-1635308:1:exon
so has part: feature:1651745-1651837:1:exon
so has part: feature:1662652-1662808:1:exon
so has part: feature:1668175-1668375:1:exon
so has part: feature:1669445-1669596:1:exon
so has part: feature:1672346-1672456:1:exon
so has part: feature:1673901-1674082:1:exon
so has part: feature:1674827-1674932:1:exon
so has part: feature:1680739-1680873:1:exon
so has part: feature:1683643-1683930:1:exon

XP_032558684.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1581175-1581279:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1583114-1583309:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1589969-1590135:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1591102-1591221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1593057-1593323:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1596385-1596588:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1634284-1634364:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1635156-1635308:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1651745-1651837:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1662652-1662808:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1668175-1668375:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1669445-1669596:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1672346-1672456:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1673901-1674082:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1674827-1674932:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1680739-1680873:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1683643-1683930:1:exon

CTNNA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: CTNNA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: catenin alpha-1
translation: MTAVTAANVNFKWDPKSLEIRTLAVERLLEPLVTQVTTLVNTSNKGPSNKKRGRSKKAHVLAASVEQATENFLEKGDKIAKESQFLKEELVAAVEDVRKQGDLMKSASGEFADDPCSSVKRGNMVRAARALLSAVTRLLILADMADVYKLLVQLKVVEDGILKLRNAGTEQDLGIQYKALKPEVDKLNIMAAKRQQELKDVGHRDQMAAARGILQKNVPILYTASQACLQHPDVAAYKANRDLIYKQLQQAVTGISNAAQATASDDTAQQQGGGGELAYALNNFDKQIIVDPSTFSEERFRPSLEERLESIISGAALMADSSCTRDDRRERIVAECNAVRQALQDLLSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKNGNEKEVKEYAQVFREHANKLIEVANLACSISNNEEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWERQVRVLTDAVDDITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNYEPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIRDIRKAVLMIRTPEELDDSDFETEDFDVRSRTSIQTEDDQLIAGQSARAIMAQLPQEQKAKIAEQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQNLGGELVVSGVDSAMSLIQAAKNLMNAVVQTVKASYVASTKYQKSQGMASLNLPAVSWKMKAPEKKPLVKREKQDETQTKIKRASQKKHVNPVQALSEFKAMESI
SIO_010081: CTNNA1
subclass of: SO_0000673
so part of: CTNNA1
location: join(1581175..1581279,1583114..1583309,1589969..1590135,1591102..1591221,1593057..1593323,1596385..1596588,1634284..1634364,1635156..1635308,1651745..1651837,1662652..1662808,1668175..1668375,1669445..1669596,1672346..1672456,1673901..1674082,1674827..1674932,1680739..1680873,1683643..1683930)
location: region:1581175-1683930:1
so has part: feature:1581175-1581279:1:exon
so has part: feature:1583114-1583309:1:exon
so has part: feature:1589969-1590135:1:exon
so has part: feature:1591102-1591221:1:exon
so has part: feature:1593057-1593323:1:exon
so has part: feature:1596385-1596588:1:exon
so has part: feature:1634284-1634364:1:exon
so has part: feature:1635156-1635308:1:exon
so has part: feature:1651745-1651837:1:exon
so has part: feature:1662652-1662808:1:exon
so has part: feature:1668175-1668375:1:exon
so has part: feature:1669445-1669596:1:exon
so has part: feature:1672346-1672456:1:exon
so has part: feature:1673901-1674082:1:exon
so has part: feature:1674827-1674932:1:exon
so has part: feature:1680739-1680873:1:exon
so has part: feature:1683643-1683930:1:exon

XP_032558685.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1581175-1581279:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1583114-1583309:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1589969-1590135:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1591102-1591221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1593057-1593323:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1596385-1596588:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1634284-1634364:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1635156-1635308:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1651745-1651837:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1662652-1662808:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1668175-1668375:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1669445-1669596:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1672346-1672456:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1673901-1674082:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1674827-1674932:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1680739-1680873:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1683643-1683930:1:exon

LRRTM2
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LRRTM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1619492..1626863)
location: region:1619492-1626863:-1
so has part: feature:1619492-1626863:-1:exon
subclass of: SO_0000010

116794253
type: Gene
SIO_000068: ncbigene

position:1619492:-1
position: 1619492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1626863:-1
position: 1626863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1619492-1626863:-1:exon

LRRTM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LRRTM2
product: leucine rich repeat transmembrane neuronal 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032702797.1
SIO_010081: LRRTM2
subclass of: SO_0000673
so part of: LRRTM2
location: complement(join(1619492..1625500,1626285..1626859))
location: region:1619492-1626859:-1
so has part: feature:1626285-1626859:-1:exon
so has part: feature:1619492-1625500:-1:exon

position:1626859:-1
position: 1626859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1626285-1626859:-1:exon

position:1626285:-1
position: 1626285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1619492-1625500:-1:exon

position:1625500:-1
position: 1625500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRRTM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LRRTM2
product: leucine rich repeat transmembrane neuronal 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032702796.1
SIO_010081: LRRTM2
subclass of: SO_0000673
so part of: LRRTM2
location: complement(join(1619492..1625521,1626285..1626859))
location: region:1619492-1626859:-1
so has part: feature:1626285-1626859:-1:exon
so has part: feature:1619492-1625521:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1626285-1626859:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1619492-1625521:-1:exon

position:1625521:-1
position: 1625521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRRTM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LRRTM2
product: leucine rich repeat transmembrane neuronal 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 long SRA read, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032702795.1
SIO_010081: LRRTM2
subclass of: SO_0000673
so part of: LRRTM2
location: complement(join(1624210..1625949,1626285..1626863))
location: region:1624210-1626863:-1
so has part: feature:1626285-1626863:-1:exon
so has part: feature:1624210-1625949:-1:exon

position:1624210:-1
position: 1624210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1626285-1626863:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1624210-1625949:-1:exon

position:1625949:-1
position: 1625949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRRTM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LRRTM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat transmembrane neuronal protein 2 isoform X3
translation: MHPPMYSKEWLFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLAKLDLTGNEIKAIDLTVFETMPNLKTLLMDNNKLTTLDSKILSSLTSLTTVGLSGNLWECSPKICSLATWLSGFQGRWEHSILCHSPDHTQGEDILDAVYGFQLCWNLSTVVTPVATTYTAPTTEYTKRISSSHFHMGDKEIPTTAGMVVTTEEHFPEPNNAIFTQRVITGTMALLFSFFFIIFIVFISRKCCPPTLRRIRQCSMIQNHRQLRSQTRLHMANISDQGPYNEYEPTHEGPFIIINGYGQCKCQQLPYKECEV
SIO_010081: LRRTM2
subclass of: SO_0000673
so part of: LRRTM2
location: complement(join(1624403..1625500,1626285..1626314))
location: region:1624403-1626314:-1
so has part: feature:1626285-1626314:-1:exon
so has part: feature:1624403-1625500:-1:exon

XP_032558688.1
type: Protein
SIO_000068: ncbiprotein

position:1624403:-1
position: 1624403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1626314:-1
position: 1626314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1626285-1626314:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1624403-1625500:-1:exon

LRRTM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LRRTM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat transmembrane neuronal protein 2 isoform X2
translation: MHPPMYSKEWLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLAKLDLTGNEIKAIDLTVFETMPNLKTLLMDNNKLTTLDSKILSSLTSLTTVGLSGNLWECSPKICSLATWLSGFQGRWEHSILCHSPDHTQGEDILDAVYGFQLCWNLSTVVTPVATTYTAPTTEYTKRISSSHFHMGDKEIPTTAGMVVTTEEHFPEPNNAIFTQRVITGTMALLFSFFFIIFIVFISRKCCPPTLRRIRQCSMIQNHRQLRSQTRLHMANISDQGPYNEYEPTHEGPFIIINGYGQCKCQQLPYKECEV
SIO_010081: LRRTM2
subclass of: SO_0000673
so part of: LRRTM2
location: complement(join(1624403..1625521,1626285..1626314))
location: region:1624403-1626314:-1
so has part: feature:1626285-1626314:-1:exon
so has part: feature:1624403-1625521:-1:exon

XP_032558687.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1626285-1626314:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1624403-1625521:-1:exon

LRRTM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LRRTM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat transmembrane neuronal protein 2 isoform X1
translation: MGLHFKWPLGARMLAALYAMSMVLKMLPALGMACPPKCRCEKLLFYCDSQGFHSVPNTTEKGSLGLSLRHNYISELERDQFASFSQLTWLHLDHNQIATVREDSFQGLYKLKELVLSSNKIFHLPNTTFSQLLNLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLAKLDLTGNEIKAIDLTVFETMPNLKTLLMDNNKLTTLDSKILSSLTSLTTVGLSGNLWECSPKICSLATWLSGFQGRWEHSILCHSPDHTQGEDILDAVYGFQLCWNLSTVVTPVATTYTAPTTEYTKRISSSHFHMGDKEIPTTAGMVVTTEEHFPEPNNAIFTQRVITGTMALLFSFFFIIFIVFISRKCCPPTLRRIRQCSMIQNHRQLRSQTRLHMANISDQGPYNEYEPTHEGPFIIINGYGQCKCQQLPYKECEV
SIO_010081: LRRTM2
subclass of: SO_0000673
so part of: LRRTM2
location: complement(join(1624403..1625949,1626285..1626288))
location: region:1624403-1626288:-1
so has part: feature:1626285-1626288:-1:exon
so has part: feature:1624403-1625949:-1:exon

XP_032558686.1
type: Protein
SIO_000068: ncbiprotein

position:1626288:-1
position: 1626288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1626285-1626288:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1624403-1625949:-1:exon

SIL1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: SIL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1691990..1791761)
location: region:1691990-1791761:-1
so has part: feature:1691990-1791761:-1:exon
subclass of: SO_0000010

116794523
type: Gene
SIO_000068: ncbigene

position:1691990:-1
position: 1691990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1791761:-1
position: 1791761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1691990-1791761:-1:exon

SIL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SIL1
product: SIL1 nucleotide exchange factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 2 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032703250.1
SIO_010081: SIL1
subclass of: SO_0000673
so part of: SIL1
location: complement(join(1691990..1692452,1694095..1694259,1696434..1696530,1727463..1727584,1732091..1732282,1734626..1734722,1735894..1736014,1763196..1763331,1767296..1767409,1791698..1791761))
location: region:1691990-1791761:-1
so has part: feature:1791698-1791761:-1:exon
so has part: feature:1767296-1767409:-1:exon
so has part: feature:1763196-1763331:-1:exon
so has part: feature:1735894-1736014:-1:exon
so has part: feature:1734626-1734722:-1:exon
so has part: feature:1732091-1732282:-1:exon
so has part: feature:1727463-1727584:-1:exon
so has part: feature:1696434-1696530:-1:exon
so has part: feature:1694095-1694259:-1:exon
so has part: feature:1691990-1692452:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1791698-1791761:-1:exon

position:1791698:-1
position: 1791698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1767296-1767409:-1:exon

position:1767296:-1
position: 1767296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1767409:-1
position: 1767409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1763196-1763331:-1:exon

position:1763196:-1
position: 1763196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1763331:-1
position: 1763331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1735894-1736014:-1:exon

position:1735894:-1
position: 1735894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1736014:-1
position: 1736014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1734626-1734722:-1:exon

position:1734626:-1
position: 1734626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1734722:-1
position: 1734722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1732091-1732282:-1:exon

position:1732091:-1
position: 1732091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1732282:-1
position: 1732282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1727463-1727584:-1:exon

position:1727463:-1
position: 1727463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1727584:-1
position: 1727584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1696434-1696530:-1:exon

position:1696434:-1
position: 1696434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1696530:-1
position: 1696530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1694095-1694259:-1:exon

position:1694095:-1
position: 1694095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1694259:-1
position: 1694259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1691990-1692452:-1:exon

position:1692452:-1
position: 1692452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SIL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SIL1
product: SIL1 nucleotide exchange factor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032703252.1
SIO_010081: SIL1
subclass of: SO_0000673
so part of: SIL1
location: complement(join(1691990..1692452,1694095..1694259,1696434..1696530,1727463..1727584,1732091..1732282,1734626..1734722,1735894..1736014,1763196..1763331,1767296..1767411,1791343..1791393))
location: region:1691990-1791393:-1
so has part: feature:1791343-1791393:-1:exon
so has part: feature:1767296-1767411:-1:exon
so has part: feature:1763196-1763331:-1:exon
so has part: feature:1735894-1736014:-1:exon
so has part: feature:1734626-1734722:-1:exon
so has part: feature:1732091-1732282:-1:exon
so has part: feature:1727463-1727584:-1:exon
so has part: feature:1696434-1696530:-1:exon
so has part: feature:1694095-1694259:-1:exon
so has part: feature:1691990-1692452:-1:exon

position:1791393:-1
position: 1791393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1791343-1791393:-1:exon

position:1791343:-1
position: 1791343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1767296-1767411:-1:exon

position:1767411:-1
position: 1767411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1763196-1763331:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1735894-1736014:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1734626-1734722:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1732091-1732282:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1727463-1727584:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1696434-1696530:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1694095-1694259:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1691990-1692452:-1:exon

SIL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SIL1
product: SIL1 nucleotide exchange factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032703251.1
SIO_010081: SIL1
subclass of: SO_0000673
so part of: SIL1
location: complement(join(1691990..1692452,1694095..1694259,1696434..1696530,1727463..1727584,1732091..1732282,1734626..1734722,1735894..1736014,1763196..1763331,1767296..1767409,1787616..1787745))
location: region:1691990-1787745:-1
so has part: feature:1787616-1787745:-1:exon
so has part: feature:1767296-1767409:-1:exon
so has part: feature:1763196-1763331:-1:exon
so has part: feature:1735894-1736014:-1:exon
so has part: feature:1734626-1734722:-1:exon
so has part: feature:1732091-1732282:-1:exon
so has part: feature:1727463-1727584:-1:exon
so has part: feature:1696434-1696530:-1:exon
so has part: feature:1694095-1694259:-1:exon
so has part: feature:1691990-1692452:-1:exon

position:1787745:-1
position: 1787745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1787616-1787745:-1:exon

position:1787616:-1
position: 1787616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1767296-1767409:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1763196-1763331:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1735894-1736014:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1734626-1734722:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1732091-1732282:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1727463-1727584:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1696434-1696530:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1694095-1694259:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1691990-1692452:-1:exon

SIL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SIL1
product: SIL1 nucleotide exchange factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032703249.1
SIO_010081: SIL1
subclass of: SO_0000673
so part of: SIL1
location: complement(join(1691990..1692452,1694095..1694259,1696434..1696530,1727463..1727584,1732091..1732282,1734626..1734722,1735894..1736014,1763196..1763331,1767296..1767409,1785469..1785583,1787616..1787745))
location: region:1691990-1787745:-1
so has part: feature:1787616-1787745:-1:exon
so has part: feature:1785469-1785583:-1:exon
so has part: feature:1767296-1767409:-1:exon
so has part: feature:1763196-1763331:-1:exon
so has part: feature:1735894-1736014:-1:exon
so has part: feature:1734626-1734722:-1:exon
so has part: feature:1732091-1732282:-1:exon
so has part: feature:1727463-1727584:-1:exon
so has part: feature:1696434-1696530:-1:exon
so has part: feature:1694095-1694259:-1:exon
so has part: feature:1691990-1692452:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1787616-1787745:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1785469-1785583:-1:exon

position:1785469:-1
position: 1785469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1785583:-1
position: 1785583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1767296-1767409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1763196-1763331:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1735894-1736014:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1734626-1734722:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1732091-1732282:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1727463-1727584:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1696434-1696530:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1694095-1694259:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1691990-1692452:-1:exon

SIL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SIL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleotide exchange factor SIL1 isoform X1
translation: MDPEAGAMSHWASLLSTAARVNLLVLLVSVLFSWSSLSDRVPEFALTKIEESDIKDDSGNEPVTEDDADPEDLEVFYPTHQWQTLRPGQAVPAGSHVRLNLQTGEREAKLPDSENGRSDTRAERRRKRLGKVDVDANSFTSQELKKALAKMKESEKAERKTQEEEVRKKFRPIEQLKEEFEKLNMKMETDYEIMVKLISKFNSSASTLDEKVAALYDLEYYVHQVDNAKDFLSMGGLRLVIEGLNSSEAALKEHAAFVLGAALSSNPKVQIEAIEGGALQKLLVILATEQPLAVRKKALFALSSMLRHFPYAQQQFLKLGGLQVLRSLFRQKGMETLHVRVVTLLYDLIMEKMLLEDSQHGEQMEEKIQQYREVRLVPAVVEQDWCAVAPNLLAMPEHDTREKVLKLVGVLMAFCREHYRGDPALGTTLGLLRSEYEELAAEEQREGDKDGYFRELLGSINTIIQELR
SIO_010081: SIL1
subclass of: SO_0000673
so part of: SIL1
location: complement(join(1692102..1692452,1694095..1694259,1696434..1696530,1727463..1727584,1732091..1732282,1734626..1734722,1735894..1736014,1763196..1763331,1767296..1767409,1785469..1785480))
location: region:1692102-1785480:-1
so has part: feature:1785469-1785480:-1:exon
so has part: feature:1767296-1767409:-1:exon
so has part: feature:1763196-1763331:-1:exon
so has part: feature:1735894-1736014:-1:exon
so has part: feature:1734626-1734722:-1:exon
so has part: feature:1732091-1732282:-1:exon
so has part: feature:1727463-1727584:-1:exon
so has part: feature:1696434-1696530:-1:exon
so has part: feature:1694095-1694259:-1:exon
so has part: feature:1692102-1692452:-1:exon

XP_032559140.1
type: Protein
SIO_000068: ncbiprotein

position:1692102:-1
position: 1692102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1785480:-1
position: 1785480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1785469-1785480:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1767296-1767409:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1763196-1763331:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1735894-1736014:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1734626-1734722:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1732091-1732282:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1727463-1727584:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1696434-1696530:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1694095-1694259:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1692102-1692452:-1:exon

SIL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SIL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleotide exchange factor SIL1 isoform X2
translation: MSHWASLLSTAARVNLLVLLVSVLFSWSSLSDRVPEFALTKIEESDIKDDSGNEPVTEDDADPEDLEVFYPTHQWQTLRPGQAVPAGSHVRLNLQTGEREAKLPDSENGRSDTRAERRRKRLGKVDVDANSFTSQELKKALAKMKESEKAERKTQEEEVRKKFRPIEQLKEEFEKLNMKMETDYEIMVKLISKFNSSASTLDEKVAALYDLEYYVHQVDNAKDFLSMGGLRLVIEGLNSSEAALKEHAAFVLGAALSSNPKVQIEAIEGGALQKLLVILATEQPLAVRKKALFALSSMLRHFPYAQQQFLKLGGLQVLRSLFRQKGMETLHVRVVTLLYDLIMEKMLLEDSQHGEQMEEKIQQYREVRLVPAVVEQDWCAVAPNLLAMPEHDTREKVLKLVGVLMAFCREHYRGDPALGTTLGLLRSEYEELAAEEQREGDKDGYFRELLGSINTIIQELR
SIO_010081: SIL1
subclass of: SO_0000673
so part of: SIL1
location: complement(join(1692102..1692452,1694095..1694259,1696434..1696530,1727463..1727584,1732091..1732282,1734626..1734722,1735894..1736014,1763196..1763331,1767296..1767400))
location: region:1692102-1767400:-1
so has part: feature:1767296-1767400:-1:exon
so has part: feature:1763196-1763331:-1:exon
so has part: feature:1735894-1736014:-1:exon
so has part: feature:1734626-1734722:-1:exon
so has part: feature:1732091-1732282:-1:exon
so has part: feature:1727463-1727584:-1:exon
so has part: feature:1696434-1696530:-1:exon
so has part: feature:1694095-1694259:-1:exon
so has part: feature:1692102-1692452:-1:exon

XP_032559141.1
type: Protein
SIO_000068: ncbiprotein

position:1767400:-1
position: 1767400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1767296-1767400:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1763196-1763331:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1735894-1736014:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1734626-1734722:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1732091-1732282:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1727463-1727584:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1696434-1696530:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1694095-1694259:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1692102-1692452:-1:exon

SIL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SIL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleotide exchange factor SIL1 isoform X2
translation: MSHWASLLSTAARVNLLVLLVSVLFSWSSLSDRVPEFALTKIEESDIKDDSGNEPVTEDDADPEDLEVFYPTHQWQTLRPGQAVPAGSHVRLNLQTGEREAKLPDSENGRSDTRAERRRKRLGKVDVDANSFTSQELKKALAKMKESEKAERKTQEEEVRKKFRPIEQLKEEFEKLNMKMETDYEIMVKLISKFNSSASTLDEKVAALYDLEYYVHQVDNAKDFLSMGGLRLVIEGLNSSEAALKEHAAFVLGAALSSNPKVQIEAIEGGALQKLLVILATEQPLAVRKKALFALSSMLRHFPYAQQQFLKLGGLQVLRSLFRQKGMETLHVRVVTLLYDLIMEKMLLEDSQHGEQMEEKIQQYREVRLVPAVVEQDWCAVAPNLLAMPEHDTREKVLKLVGVLMAFCREHYRGDPALGTTLGLLRSEYEELAAEEQREGDKDGYFRELLGSINTIIQELR
SIO_010081: SIL1
subclass of: SO_0000673
so part of: SIL1
location: complement(join(1692102..1692452,1694095..1694259,1696434..1696530,1727463..1727584,1732091..1732282,1734626..1734722,1735894..1736014,1763196..1763331,1767296..1767400))
location: region:1692102-1767400:-1
so has part: feature:1767296-1767400:-1:exon
so has part: feature:1763196-1763331:-1:exon
so has part: feature:1735894-1736014:-1:exon
so has part: feature:1734626-1734722:-1:exon
so has part: feature:1732091-1732282:-1:exon
so has part: feature:1727463-1727584:-1:exon
so has part: feature:1696434-1696530:-1:exon
so has part: feature:1694095-1694259:-1:exon
so has part: feature:1692102-1692452:-1:exon

XP_032559142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1767296-1767400:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1763196-1763331:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1735894-1736014:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1734626-1734722:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1732091-1732282:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1727463-1727584:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1696434-1696530:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1694095-1694259:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1692102-1692452:-1:exon

SIL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SIL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleotide exchange factor SIL1 isoform X2
translation: MSHWASLLSTAARVNLLVLLVSVLFSWSSLSDRVPEFALTKIEESDIKDDSGNEPVTEDDADPEDLEVFYPTHQWQTLRPGQAVPAGSHVRLNLQTGEREAKLPDSENGRSDTRAERRRKRLGKVDVDANSFTSQELKKALAKMKESEKAERKTQEEEVRKKFRPIEQLKEEFEKLNMKMETDYEIMVKLISKFNSSASTLDEKVAALYDLEYYVHQVDNAKDFLSMGGLRLVIEGLNSSEAALKEHAAFVLGAALSSNPKVQIEAIEGGALQKLLVILATEQPLAVRKKALFALSSMLRHFPYAQQQFLKLGGLQVLRSLFRQKGMETLHVRVVTLLYDLIMEKMLLEDSQHGEQMEEKIQQYREVRLVPAVVEQDWCAVAPNLLAMPEHDTREKVLKLVGVLMAFCREHYRGDPALGTTLGLLRSEYEELAAEEQREGDKDGYFRELLGSINTIIQELR
SIO_010081: SIL1
subclass of: SO_0000673
so part of: SIL1
location: complement(join(1692102..1692452,1694095..1694259,1696434..1696530,1727463..1727584,1732091..1732282,1734626..1734722,1735894..1736014,1763196..1763331,1767296..1767400))
location: region:1692102-1767400:-1
so has part: feature:1767296-1767400:-1:exon
so has part: feature:1763196-1763331:-1:exon
so has part: feature:1735894-1736014:-1:exon
so has part: feature:1734626-1734722:-1:exon
so has part: feature:1732091-1732282:-1:exon
so has part: feature:1727463-1727584:-1:exon
so has part: feature:1696434-1696530:-1:exon
so has part: feature:1694095-1694259:-1:exon
so has part: feature:1692102-1692452:-1:exon

XP_032559143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1767296-1767400:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1763196-1763331:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1735894-1736014:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1734626-1734722:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1732091-1732282:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1727463-1727584:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1696434-1696530:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1694095-1694259:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1692102-1692452:-1:exon

LOC116794328
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794328
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1807498..1809170
location: region:1807498-1809170:1
so has part: feature:1807498-1809170:1:exon
subclass of: SO_0000011

116794328
type: Gene
SIO_000068: ncbigene

position:1807498:1
position: 1807498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1809170:1
position: 1809170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1807498-1809170:1:exon

LOC116794328
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116794328
product: uncharacterized LOC116794328, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004359755.1
SIO_010081: LOC116794328
subclass of: SO_0000673
so part of: LOC116794328
location: join(1807498..1807610,1807955..1808272,1808861..1809170)
location: region:1807498-1809170:1
so has part: feature:1807498-1807610:1:exon
so has part: feature:1807955-1808272:1:exon
so has part: feature:1808861-1809170:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1807498-1807610:1:exon

position:1807610:1
position: 1807610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1807955-1808272:1:exon

position:1807955:1
position: 1807955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1808272:1
position: 1808272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1808861-1809170:1:exon

position:1808861:1
position: 1808861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116794328
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116794328
product: uncharacterized LOC116794328, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004359756.1
SIO_010081: LOC116794328
subclass of: SO_0000673
so part of: LOC116794328
location: join(1807634..1807846,1807955..1808272,1808861..1809170)
location: region:1807634-1809170:1
so has part: feature:1807634-1807846:1:exon
so has part: feature:1807955-1808272:1:exon
so has part: feature:1808861-1809170:1:exon

position:1807634:1
position: 1807634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1807634-1807846:1:exon

position:1807846:1
position: 1807846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1807955-1808272:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1808861-1809170:1:exon

LOC116794621
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794621
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1808501..1808703
location: region:1808501-1808703:1
so has part: feature:1808501-1808703:1:exon
subclass of: SO_0000578

116794621
type: Gene
SIO_000068: ncbigene

position:1808501:1
position: 1808501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1808703:1
position: 1808703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1808501-1808703:1:exon

LOC116794621
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: snoRNA
gene: LOC116794621
product: small nucleolar RNA SNORA74
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00090
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004359829.1
SIO_010081: LOC116794621
subclass of: SO_0000673
so part of: LOC116794621
location: 1808501..1808703
location: region:1808501-1808703:1
so has part: feature:1808501-1808703:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1808501-1808703:1:exon

MATR3
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: MATR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1811870..1837417
location: region:1811870-1837417:1
so has part: feature:1811870-1837417:1:exon
subclass of: SO_0000010

116794157
type: Gene
SIO_000068: ncbigene

position:1811870:1
position: 1811870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1837417:1
position: 1837417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1811870-1837417:1:exon

MATR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: MATR3
product: matrin 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 79 ESTs, 9 long SRA reads, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032702565.1
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: join(1811870..1811944,1819670..1820767,1824884..1824945,1825597..1825638,1825879..1825982,1827005..1827057,1827490..1827615,1828207..1828332,1828523..1828693,1829896..1830027,1831068..1831111,1831552..1831945,1833551..1833944,1834543..1834664,1836143..1837208)
location: region:1811870-1837208:1
so has part: feature:1811870-1811944:1:exon
so has part: feature:1819670-1820767:1:exon
so has part: feature:1824884-1824945:1:exon
so has part: feature:1825597-1825638:1:exon
so has part: feature:1825879-1825982:1:exon
so has part: feature:1827005-1827057:1:exon
so has part: feature:1827490-1827615:1:exon
so has part: feature:1828207-1828332:1:exon
so has part: feature:1828523-1828693:1:exon
so has part: feature:1829896-1830027:1:exon
so has part: feature:1831068-1831111:1:exon
so has part: feature:1831552-1831945:1:exon
so has part: feature:1833551-1833944:1:exon
so has part: feature:1834543-1834664:1:exon
so has part: feature:1836143-1837208:1:exon

position:1837208:1
position: 1837208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1811870-1811944:1:exon

position:1811944:1
position: 1811944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1819670-1820767:1:exon

position:1819670:1
position: 1819670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1820767:1
position: 1820767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1824884-1824945:1:exon

position:1824884:1
position: 1824884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1824945:1
position: 1824945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1825597-1825638:1:exon

position:1825597:1
position: 1825597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1825638:1
position: 1825638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1825879-1825982:1:exon

position:1825879:1
position: 1825879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1825982:1
position: 1825982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1827005-1827057:1:exon

position:1827005:1
position: 1827005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1827057:1
position: 1827057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1827490-1827615:1:exon

position:1827490:1
position: 1827490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1827615:1
position: 1827615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1828207-1828332:1:exon

position:1828207:1
position: 1828207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1828332:1
position: 1828332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1828523-1828693:1:exon

position:1828523:1
position: 1828523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1828693:1
position: 1828693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1829896-1830027:1:exon

position:1829896:1
position: 1829896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1830027:1
position: 1830027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1831068-1831111:1:exon

position:1831068:1
position: 1831068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1831111:1
position: 1831111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1831552-1831945:1:exon

position:1831552:1
position: 1831552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1831945:1
position: 1831945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1833551-1833944:1:exon

position:1833551:1
position: 1833551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1833944:1
position: 1833944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1834543-1834664:1:exon

position:1834543:1
position: 1834543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1834664:1
position: 1834664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1836143-1837208:1:exon

position:1836143:1
position: 1836143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MATR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: MATR3
product: matrin 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 65 ESTs, 8 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032702569.1
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: join(1811898..1811944,1824884..1824945,1825597..1825638,1825879..1825982,1827005..1827057,1827490..1827615,1828207..1828332,1828523..1828693,1829896..1830027,1831068..1831111,1831552..1831945,1833551..1833944,1834543..1834664,1836143..1837417)
location: region:1811898-1837417:1
so has part: feature:1811898-1811944:1:exon
so has part: feature:1824884-1824945:1:exon
so has part: feature:1825597-1825638:1:exon
so has part: feature:1825879-1825982:1:exon
so has part: feature:1827005-1827057:1:exon
so has part: feature:1827490-1827615:1:exon
so has part: feature:1828207-1828332:1:exon
so has part: feature:1828523-1828693:1:exon
so has part: feature:1829896-1830027:1:exon
so has part: feature:1831068-1831111:1:exon
so has part: feature:1831552-1831945:1:exon
so has part: feature:1833551-1833944:1:exon
so has part: feature:1834543-1834664:1:exon
so has part: feature:1836143-1837417:1:exon

position:1811898:1
position: 1811898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1811898-1811944:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1824884-1824945:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1825597-1825638:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1825879-1825982:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1827005-1827057:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1827490-1827615:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1828207-1828332:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1828523-1828693:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1829896-1830027:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1831068-1831111:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1831552-1831945:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1833551-1833944:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1834543-1834664:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1836143-1837417:1:exon

MATR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: MATR3
product: matrin 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 79 ESTs, 9 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032702566.1
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: join(1812137..1812153,1819670..1820767,1824884..1824945,1825597..1825638,1825879..1825982,1827005..1827057,1827490..1827615,1828207..1828332,1828523..1828693,1829896..1830027,1831068..1831111,1831552..1831945,1833551..1833944,1834543..1834664,1836143..1837417)
location: region:1812137-1837417:1
so has part: feature:1812137-1812153:1:exon
so has part: feature:1819670-1820767:1:exon
so has part: feature:1824884-1824945:1:exon
so has part: feature:1825597-1825638:1:exon
so has part: feature:1825879-1825982:1:exon
so has part: feature:1827005-1827057:1:exon
so has part: feature:1827490-1827615:1:exon
so has part: feature:1828207-1828332:1:exon
so has part: feature:1828523-1828693:1:exon
so has part: feature:1829896-1830027:1:exon
so has part: feature:1831068-1831111:1:exon
so has part: feature:1831552-1831945:1:exon
so has part: feature:1833551-1833944:1:exon
so has part: feature:1834543-1834664:1:exon
so has part: feature:1836143-1837417:1:exon

position:1812137:1
position: 1812137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1812137-1812153:1:exon

position:1812153:1
position: 1812153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1819670-1820767:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1824884-1824945:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1825597-1825638:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1825879-1825982:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1827005-1827057:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1827490-1827615:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1828207-1828332:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1828523-1828693:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1829896-1830027:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1831068-1831111:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1831552-1831945:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1833551-1833944:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1834543-1834664:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1836143-1837417:1:exon

MATR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: MATR3
product: matrin 3, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 66 ESTs, 8 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032702570.1
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: join(1812177..1812325,1824884..1824945,1825597..1825638,1825879..1825982,1827005..1827057,1827490..1827615,1828207..1828332,1828523..1828693,1829896..1830027,1831068..1831111,1831552..1831945,1833551..1833944,1834543..1834664,1836143..1837417)
location: region:1812177-1837417:1
so has part: feature:1812177-1812325:1:exon
so has part: feature:1824884-1824945:1:exon
so has part: feature:1825597-1825638:1:exon
so has part: feature:1825879-1825982:1:exon
so has part: feature:1827005-1827057:1:exon
so has part: feature:1827490-1827615:1:exon
so has part: feature:1828207-1828332:1:exon
so has part: feature:1828523-1828693:1:exon
so has part: feature:1829896-1830027:1:exon
so has part: feature:1831068-1831111:1:exon
so has part: feature:1831552-1831945:1:exon
so has part: feature:1833551-1833944:1:exon
so has part: feature:1834543-1834664:1:exon
so has part: feature:1836143-1837417:1:exon

position:1812177:1
position: 1812177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1812177-1812325:1:exon

position:1812325:1
position: 1812325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1824884-1824945:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1825597-1825638:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1825879-1825982:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1827005-1827057:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1827490-1827615:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1828207-1828332:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1828523-1828693:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1829896-1830027:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1831068-1831111:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1831552-1831945:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1833551-1833944:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1834543-1834664:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1836143-1837417:1:exon

MATR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: MATR3
product: matrin 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 80 ESTs, 9 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_032702563.1
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: join(1812198..1812325,1819670..1820767,1824884..1824945,1825597..1825638,1825879..1825982,1827005..1827057,1827490..1827615,1828207..1828332,1828523..1828693,1829896..1830027,1831068..1831111,1831552..1831945,1833551..1833944,1834543..1834664,1836143..1837417)
location: region:1812198-1837417:1
so has part: feature:1812198-1812325:1:exon
so has part: feature:1819670-1820767:1:exon
so has part: feature:1824884-1824945:1:exon
so has part: feature:1825597-1825638:1:exon
so has part: feature:1825879-1825982:1:exon
so has part: feature:1827005-1827057:1:exon
so has part: feature:1827490-1827615:1:exon
so has part: feature:1828207-1828332:1:exon
so has part: feature:1828523-1828693:1:exon
so has part: feature:1829896-1830027:1:exon
so has part: feature:1831068-1831111:1:exon
so has part: feature:1831552-1831945:1:exon
so has part: feature:1833551-1833944:1:exon
so has part: feature:1834543-1834664:1:exon
so has part: feature:1836143-1837417:1:exon

position:1812198:1
position: 1812198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1812198-1812325:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1819670-1820767:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1824884-1824945:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1825597-1825638:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1825879-1825982:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1827005-1827057:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1827490-1827615:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1828207-1828332:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1828523-1828693:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1829896-1830027:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1831068-1831111:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1831552-1831945:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1833551-1833944:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1834543-1834664:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1836143-1837417:1:exon

MATR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: MATR3
product: matrin 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 60 ESTs, 6 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032702568.1
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: join(1812213..1812325,1819670..1820767,1824884..1824945,1825597..1825638,1825879..1825982,1827005..1827057,1827490..1827615,1828207..1828332,1828523..1828693,1829896..1830027,1831068..1831111,1831552..1831945,1833551..1833944,1836143..1837417)
location: region:1812213-1837417:1
so has part: feature:1812213-1812325:1:exon
so has part: feature:1819670-1820767:1:exon
so has part: feature:1824884-1824945:1:exon
so has part: feature:1825597-1825638:1:exon
so has part: feature:1825879-1825982:1:exon
so has part: feature:1827005-1827057:1:exon
so has part: feature:1827490-1827615:1:exon
so has part: feature:1828207-1828332:1:exon
so has part: feature:1828523-1828693:1:exon
so has part: feature:1829896-1830027:1:exon
so has part: feature:1831068-1831111:1:exon
so has part: feature:1831552-1831945:1:exon
so has part: feature:1833551-1833944:1:exon
so has part: feature:1836143-1837417:1:exon

position:1812213:1
position: 1812213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1812213-1812325:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1819670-1820767:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1824884-1824945:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1825597-1825638:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1825879-1825982:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1827005-1827057:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1827490-1827615:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1828207-1828332:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1828523-1828693:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1829896-1830027:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1831068-1831111:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1831552-1831945:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1833551-1833944:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1836143-1837417:1:exon

MATR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: MATR3
product: matrin 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 81 ESTs, 9 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_032702564.1
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: join(1816232..1820767,1824884..1824945,1825597..1825638,1825879..1825982,1827005..1827057,1827490..1827615,1828207..1828332,1828523..1828693,1829896..1830027,1831068..1831111,1831552..1831945,1833551..1833944,1834543..1834664,1836143..1837417)
location: region:1816232-1837417:1
so has part: feature:1816232-1820767:1:exon
so has part: feature:1824884-1824945:1:exon
so has part: feature:1825597-1825638:1:exon
so has part: feature:1825879-1825982:1:exon
so has part: feature:1827005-1827057:1:exon
so has part: feature:1827490-1827615:1:exon
so has part: feature:1828207-1828332:1:exon
so has part: feature:1828523-1828693:1:exon
so has part: feature:1829896-1830027:1:exon
so has part: feature:1831068-1831111:1:exon
so has part: feature:1831552-1831945:1:exon
so has part: feature:1833551-1833944:1:exon
so has part: feature:1834543-1834664:1:exon
so has part: feature:1836143-1837417:1:exon

position:1816232:1
position: 1816232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1816232-1820767:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1824884-1824945:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1825597-1825638:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1825879-1825982:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1827005-1827057:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1827490-1827615:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1828207-1828332:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1828523-1828693:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1829896-1830027:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1831068-1831111:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1831552-1831945:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1833551-1833944:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1834543-1834664:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1836143-1837417:1:exon

MATR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: MATR3
product: matrin 3, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 65 ESTs, 8 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032702571.1
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: join(1819874..1819878,1824919..1824945,1825597..1825638,1825879..1825982,1827005..1827057,1827490..1827615,1828207..1828332,1828523..1828693,1829896..1830027,1831068..1831111,1831552..1831945,1833551..1833944,1834543..1834664,1836143..1837417)
location: region:1819874-1837417:1
so has part: feature:1819874-1819878:1:exon
so has part: feature:1824919-1824945:1:exon
so has part: feature:1825597-1825638:1:exon
so has part: feature:1825879-1825982:1:exon
so has part: feature:1827005-1827057:1:exon
so has part: feature:1827490-1827615:1:exon
so has part: feature:1828207-1828332:1:exon
so has part: feature:1828523-1828693:1:exon
so has part: feature:1829896-1830027:1:exon
so has part: feature:1831068-1831111:1:exon
so has part: feature:1831552-1831945:1:exon
so has part: feature:1833551-1833944:1:exon
so has part: feature:1834543-1834664:1:exon
so has part: feature:1836143-1837417:1:exon

position:1819874:1
position: 1819874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1819874-1819878:1:exon

position:1819878:1
position: 1819878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1824919-1824945:1:exon

position:1824919:1
position: 1824919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1825597-1825638:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1825879-1825982:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1827005-1827057:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1827490-1827615:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1828207-1828332:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1828523-1828693:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1829896-1830027:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1831068-1831111:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1831552-1831945:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1833551-1833944:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1834543-1834664:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1836143-1837417:1:exon

MATR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: MATR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrin-3 isoform X1
translation: MSKSFQQSSLSRDSQGHGRDLSAGIGLLAAATQSLNMPASLGRMNQGTARLASLMNLGMSSSLNQQGSHSALSSGSTSSHNLQSIFNIGSRGPLPLSSQHRGDADQATNILASFGLSARDLDELSRYPEDKITPENLPQILLQLKRRRAEEGYGRDGRSSTREPPYRVPRDDWEEKRHFRRDSFDDRGPSLNPVVDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDESFYGETSHNYHKFDSEYDRMGRGPGPERSLFEKKRGAPPNSNIEDFHGFLPKGYPHLCSICDMPVHSNKEWNHHINGATHSRRCQLLLEIYPEWNPDSDSGHGMGDPFMLQQSTNPAPGILGPPPPPFHLGGPPVGPRGAGNGNMQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQLLQLVEPFGIITNHLILNKINEAFIEMSTTEDAQAAVEYYSTTPALVFGKPVRVHLSQKYKRIKKPEGKPDQKTEPPKPELGRVIHLSNLPHSGYSDNAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDALAMVEHCANKALWFQGRCVKVDLSEKYKKLVLRIPNKGVELLKKDKTRKRTYSPDSKDSPSDKKSKTEAAQKPESGTTEEKVKEEKQEDPAEPSGAKSGEQAEQDEPSLLLESEDELLVDEEEAAALLESGSSAGEDADVANLADVATEEKKDTPDDVTVKSEGGNVVATPAAKKKLKKRYVGGFPRSMEGFVTLDEVGDEEDSDHQKLRKSGLAGKAGGKNEDSLAEIKVDKIEEPEQENEMLENGTKTEVTVKTEPVETSDATTAQDAEKNAQENPDPQDEQETKNIQEKPLVPDEFRIGPYQPNVPVGVNYVVPKTGFYCKLCSLFYTNEDVAKKTHCSSLPHYQKLKKILDKMAEDYRQKKEA
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: join(1819877..1820767,1824884..1824945,1825597..1825638,1825879..1825982,1827005..1827057,1827490..1827615,1828207..1828332,1828523..1828693,1829896..1830027,1831068..1831111,1831552..1831945,1833551..1833944,1834543..1834664,1836143..1836193)
location: region:1819877-1836193:1
so has part: feature:1819877-1820767:1:exon
so has part: feature:1824884-1824945:1:exon
so has part: feature:1825597-1825638:1:exon
so has part: feature:1825879-1825982:1:exon
so has part: feature:1827005-1827057:1:exon
so has part: feature:1827490-1827615:1:exon
so has part: feature:1828207-1828332:1:exon
so has part: feature:1828523-1828693:1:exon
so has part: feature:1829896-1830027:1:exon
so has part: feature:1831068-1831111:1:exon
so has part: feature:1831552-1831945:1:exon
so has part: feature:1833551-1833944:1:exon
so has part: feature:1834543-1834664:1:exon
so has part: feature:1836143-1836193:1:exon

XP_032558454.1
type: Protein
SIO_000068: ncbiprotein

position:1819877:1
position: 1819877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1836193:1
position: 1836193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1819877-1820767:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1824884-1824945:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1825597-1825638:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1825879-1825982:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1827005-1827057:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1827490-1827615:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1828207-1828332:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1828523-1828693:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1829896-1830027:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1831068-1831111:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1831552-1831945:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1833551-1833944:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1834543-1834664:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1836143-1836193:1:exon

MATR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: MATR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrin-3 isoform X1
translation: MSKSFQQSSLSRDSQGHGRDLSAGIGLLAAATQSLNMPASLGRMNQGTARLASLMNLGMSSSLNQQGSHSALSSGSTSSHNLQSIFNIGSRGPLPLSSQHRGDADQATNILASFGLSARDLDELSRYPEDKITPENLPQILLQLKRRRAEEGYGRDGRSSTREPPYRVPRDDWEEKRHFRRDSFDDRGPSLNPVVDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDESFYGETSHNYHKFDSEYDRMGRGPGPERSLFEKKRGAPPNSNIEDFHGFLPKGYPHLCSICDMPVHSNKEWNHHINGATHSRRCQLLLEIYPEWNPDSDSGHGMGDPFMLQQSTNPAPGILGPPPPPFHLGGPPVGPRGAGNGNMQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQLLQLVEPFGIITNHLILNKINEAFIEMSTTEDAQAAVEYYSTTPALVFGKPVRVHLSQKYKRIKKPEGKPDQKTEPPKPELGRVIHLSNLPHSGYSDNAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDALAMVEHCANKALWFQGRCVKVDLSEKYKKLVLRIPNKGVELLKKDKTRKRTYSPDSKDSPSDKKSKTEAAQKPESGTTEEKVKEEKQEDPAEPSGAKSGEQAEQDEPSLLLESEDELLVDEEEAAALLESGSSAGEDADVANLADVATEEKKDTPDDVTVKSEGGNVVATPAAKKKLKKRYVGGFPRSMEGFVTLDEVGDEEDSDHQKLRKSGLAGKAGGKNEDSLAEIKVDKIEEPEQENEMLENGTKTEVTVKTEPVETSDATTAQDAEKNAQENPDPQDEQETKNIQEKPLVPDEFRIGPYQPNVPVGVNYVVPKTGFYCKLCSLFYTNEDVAKKTHCSSLPHYQKLKKILDKMAEDYRQKKEA
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: join(1819877..1820767,1824884..1824945,1825597..1825638,1825879..1825982,1827005..1827057,1827490..1827615,1828207..1828332,1828523..1828693,1829896..1830027,1831068..1831111,1831552..1831945,1833551..1833944,1834543..1834664,1836143..1836193)
location: region:1819877-1836193:1
so has part: feature:1819877-1820767:1:exon
so has part: feature:1824884-1824945:1:exon
so has part: feature:1825597-1825638:1:exon
so has part: feature:1825879-1825982:1:exon
so has part: feature:1827005-1827057:1:exon
so has part: feature:1827490-1827615:1:exon
so has part: feature:1828207-1828332:1:exon
so has part: feature:1828523-1828693:1:exon
so has part: feature:1829896-1830027:1:exon
so has part: feature:1831068-1831111:1:exon
so has part: feature:1831552-1831945:1:exon
so has part: feature:1833551-1833944:1:exon
so has part: feature:1834543-1834664:1:exon
so has part: feature:1836143-1836193:1:exon

XP_032558455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1819877-1820767:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1824884-1824945:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1825597-1825638:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1825879-1825982:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1827005-1827057:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1827490-1827615:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1828207-1828332:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1828523-1828693:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1829896-1830027:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1831068-1831111:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1831552-1831945:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1833551-1833944:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1834543-1834664:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1836143-1836193:1:exon

MATR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: MATR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrin-3 isoform X1
translation: MSKSFQQSSLSRDSQGHGRDLSAGIGLLAAATQSLNMPASLGRMNQGTARLASLMNLGMSSSLNQQGSHSALSSGSTSSHNLQSIFNIGSRGPLPLSSQHRGDADQATNILASFGLSARDLDELSRYPEDKITPENLPQILLQLKRRRAEEGYGRDGRSSTREPPYRVPRDDWEEKRHFRRDSFDDRGPSLNPVVDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDESFYGETSHNYHKFDSEYDRMGRGPGPERSLFEKKRGAPPNSNIEDFHGFLPKGYPHLCSICDMPVHSNKEWNHHINGATHSRRCQLLLEIYPEWNPDSDSGHGMGDPFMLQQSTNPAPGILGPPPPPFHLGGPPVGPRGAGNGNMQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQLLQLVEPFGIITNHLILNKINEAFIEMSTTEDAQAAVEYYSTTPALVFGKPVRVHLSQKYKRIKKPEGKPDQKTEPPKPELGRVIHLSNLPHSGYSDNAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDALAMVEHCANKALWFQGRCVKVDLSEKYKKLVLRIPNKGVELLKKDKTRKRTYSPDSKDSPSDKKSKTEAAQKPESGTTEEKVKEEKQEDPAEPSGAKSGEQAEQDEPSLLLESEDELLVDEEEAAALLESGSSAGEDADVANLADVATEEKKDTPDDVTVKSEGGNVVATPAAKKKLKKRYVGGFPRSMEGFVTLDEVGDEEDSDHQKLRKSGLAGKAGGKNEDSLAEIKVDKIEEPEQENEMLENGTKTEVTVKTEPVETSDATTAQDAEKNAQENPDPQDEQETKNIQEKPLVPDEFRIGPYQPNVPVGVNYVVPKTGFYCKLCSLFYTNEDVAKKTHCSSLPHYQKLKKILDKMAEDYRQKKEA
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: join(1819877..1820767,1824884..1824945,1825597..1825638,1825879..1825982,1827005..1827057,1827490..1827615,1828207..1828332,1828523..1828693,1829896..1830027,1831068..1831111,1831552..1831945,1833551..1833944,1834543..1834664,1836143..1836193)
location: region:1819877-1836193:1
so has part: feature:1819877-1820767:1:exon
so has part: feature:1824884-1824945:1:exon
so has part: feature:1825597-1825638:1:exon
so has part: feature:1825879-1825982:1:exon
so has part: feature:1827005-1827057:1:exon
so has part: feature:1827490-1827615:1:exon
so has part: feature:1828207-1828332:1:exon
so has part: feature:1828523-1828693:1:exon
so has part: feature:1829896-1830027:1:exon
so has part: feature:1831068-1831111:1:exon
so has part: feature:1831552-1831945:1:exon
so has part: feature:1833551-1833944:1:exon
so has part: feature:1834543-1834664:1:exon
so has part: feature:1836143-1836193:1:exon

XP_032558456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1819877-1820767:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1824884-1824945:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1825597-1825638:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1825879-1825982:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1827005-1827057:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1827490-1827615:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1828207-1828332:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1828523-1828693:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1829896-1830027:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1831068-1831111:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1831552-1831945:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1833551-1833944:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1834543-1834664:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1836143-1836193:1:exon

MATR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: MATR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrin-3 isoform X1
translation: MSKSFQQSSLSRDSQGHGRDLSAGIGLLAAATQSLNMPASLGRMNQGTARLASLMNLGMSSSLNQQGSHSALSSGSTSSHNLQSIFNIGSRGPLPLSSQHRGDADQATNILASFGLSARDLDELSRYPEDKITPENLPQILLQLKRRRAEEGYGRDGRSSTREPPYRVPRDDWEEKRHFRRDSFDDRGPSLNPVVDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDESFYGETSHNYHKFDSEYDRMGRGPGPERSLFEKKRGAPPNSNIEDFHGFLPKGYPHLCSICDMPVHSNKEWNHHINGATHSRRCQLLLEIYPEWNPDSDSGHGMGDPFMLQQSTNPAPGILGPPPPPFHLGGPPVGPRGAGNGNMQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQLLQLVEPFGIITNHLILNKINEAFIEMSTTEDAQAAVEYYSTTPALVFGKPVRVHLSQKYKRIKKPEGKPDQKTEPPKPELGRVIHLSNLPHSGYSDNAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDALAMVEHCANKALWFQGRCVKVDLSEKYKKLVLRIPNKGVELLKKDKTRKRTYSPDSKDSPSDKKSKTEAAQKPESGTTEEKVKEEKQEDPAEPSGAKSGEQAEQDEPSLLLESEDELLVDEEEAAALLESGSSAGEDADVANLADVATEEKKDTPDDVTVKSEGGNVVATPAAKKKLKKRYVGGFPRSMEGFVTLDEVGDEEDSDHQKLRKSGLAGKAGGKNEDSLAEIKVDKIEEPEQENEMLENGTKTEVTVKTEPVETSDATTAQDAEKNAQENPDPQDEQETKNIQEKPLVPDEFRIGPYQPNVPVGVNYVVPKTGFYCKLCSLFYTNEDVAKKTHCSSLPHYQKLKKILDKMAEDYRQKKEA
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: join(1819877..1820767,1824884..1824945,1825597..1825638,1825879..1825982,1827005..1827057,1827490..1827615,1828207..1828332,1828523..1828693,1829896..1830027,1831068..1831111,1831552..1831945,1833551..1833944,1834543..1834664,1836143..1836193)
location: region:1819877-1836193:1
so has part: feature:1819877-1820767:1:exon
so has part: feature:1824884-1824945:1:exon
so has part: feature:1825597-1825638:1:exon
so has part: feature:1825879-1825982:1:exon
so has part: feature:1827005-1827057:1:exon
so has part: feature:1827490-1827615:1:exon
so has part: feature:1828207-1828332:1:exon
so has part: feature:1828523-1828693:1:exon
so has part: feature:1829896-1830027:1:exon
so has part: feature:1831068-1831111:1:exon
so has part: feature:1831552-1831945:1:exon
so has part: feature:1833551-1833944:1:exon
so has part: feature:1834543-1834664:1:exon
so has part: feature:1836143-1836193:1:exon

XP_032558457.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1819877-1820767:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1824884-1824945:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1825597-1825638:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1825879-1825982:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1827005-1827057:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1827490-1827615:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1828207-1828332:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1828523-1828693:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1829896-1830027:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1831068-1831111:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1831552-1831945:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1833551-1833944:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1834543-1834664:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1836143-1836193:1:exon

MATR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: MATR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrin-3 isoform X2
translation: MSKSFQQSSLSRDSQGHGRDLSAGIGLLAAATQSLNMPASLGRMNQGTARLASLMNLGMSSSLNQQGSHSALSSGSTSSHNLQSIFNIGSRGPLPLSSQHRGDADQATNILASFGLSARDLDELSRYPEDKITPENLPQILLQLKRRRAEEGYGRDGRSSTREPPYRVPRDDWEEKRHFRRDSFDDRGPSLNPVVDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDESFYGETSHNYHKFDSEYDRMGRGPGPERSLFEKKRGAPPNSNIEDFHGFLPKGYPHLCSICDMPVHSNKEWNHHINGATHSRRCQLLLEIYPEWNPDSDSGHGMGDPFMLQQSTNPAPGILGPPPPPFHLGGPPVGPRGAGNGNMQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQLLQLVEPFGIITNHLILNKINEAFIEMSTTEDAQAAVEYYSTTPALVFGKPVRVHLSQKYKRIKKPEGKPDQKTEPPKPELGRVIHLSNLPHSGYSDNAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDALAMVEHCANKALWFQGRCVKVDLSEKYKKLVLRIPNKGVELLKKDKTRKRTYSPDSKDSPSDKKSKTEAAQKPESGTTEEKVKEEKQEDPAEPSGAKSGEQAEQDEPSLLLESEDELLVDEEEAAALLESGSSAGEDADVANLADVATEEKKDTPDDVTVKSEGGNVVATPAAKKKLKKRYVGGFPRSMEGFVTLDEVGDEEDSDHQKLRKSGLAGKAGGKNEDSLAEIKVDKIEEPEQENEMLENGTKTEVTVKTEPVETSDATTAQDAEKNAQENPDPQDEQETKNIQEKPLVPDEFRIGPYQPNVPVENSG
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: join(1819877..1820767,1824884..1824945,1825597..1825638,1825879..1825982,1827005..1827057,1827490..1827615,1828207..1828332,1828523..1828693,1829896..1830027,1831068..1831111,1831552..1831945,1833551..1833944,1836143..1836156)
location: region:1819877-1836156:1
so has part: feature:1819877-1820767:1:exon
so has part: feature:1824884-1824945:1:exon
so has part: feature:1825597-1825638:1:exon
so has part: feature:1825879-1825982:1:exon
so has part: feature:1827005-1827057:1:exon
so has part: feature:1827490-1827615:1:exon
so has part: feature:1828207-1828332:1:exon
so has part: feature:1828523-1828693:1:exon
so has part: feature:1829896-1830027:1:exon
so has part: feature:1831068-1831111:1:exon
so has part: feature:1831552-1831945:1:exon
so has part: feature:1833551-1833944:1:exon
so has part: feature:1836143-1836156:1:exon

XP_032558459.1
type: Protein
SIO_000068: ncbiprotein

position:1836156:1
position: 1836156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1819877-1820767:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1824884-1824945:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1825597-1825638:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1825879-1825982:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1827005-1827057:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1827490-1827615:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1828207-1828332:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1828523-1828693:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1829896-1830027:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1831068-1831111:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1831552-1831945:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1833551-1833944:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1836143-1836156:1:exon

MATR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: MATR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrin-3 isoform X3
translation: MGDPFMLQQSTNPAPGILGPPPPPFHLGGPPVGPRGAGNGNMQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQLLQLVEPFGIITNHLILNKINEAFIEMSTTEDAQAAVEYYSTTPALVFGKPVRVHLSQKYKRIKKPEGKPDQKTEPPKPELGRVIHLSNLPHSGYSDNAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDALAMVEHCANKALWFQGRCVKVDLSEKYKKLVLRIPNKGVELLKKDKTRKRTYSPDSKDSPSDKKSKTEAAQKPESGTTEEKVKEEKQEDPAEPSGAKSGEQAEQDEPSLLLESEDELLVDEEEAAALLESGSSAGEDADVANLADVATEEKKDTPDDVTVKSEGGNVVATPAAKKKLKKRYVGGFPRSMEGFVTLDEVGDEEDSDHQKLRKSGLAGKAGGKNEDSLAEIKVDKIEEPEQENEMLENGTKTEVTVKTEPVETSDATTAQDAEKNAQENPDPQDEQETKNIQEKPLVPDEFRIGPYQPNVPVGVNYVVPKTGFYCKLCSLFYTNEDVAKKTHCSSLPHYQKLKKILDKMAEDYRQKKEA
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: join(1825637..1825638,1825879..1825982,1827005..1827057,1827490..1827615,1828207..1828332,1828523..1828693,1829896..1830027,1831068..1831111,1831552..1831945,1833551..1833944,1834543..1834664,1836143..1836193)
location: region:1825637-1836193:1
so has part: feature:1825637-1825638:1:exon
so has part: feature:1825879-1825982:1:exon
so has part: feature:1827005-1827057:1:exon
so has part: feature:1827490-1827615:1:exon
so has part: feature:1828207-1828332:1:exon
so has part: feature:1828523-1828693:1:exon
so has part: feature:1829896-1830027:1:exon
so has part: feature:1831068-1831111:1:exon
so has part: feature:1831552-1831945:1:exon
so has part: feature:1833551-1833944:1:exon
so has part: feature:1834543-1834664:1:exon
so has part: feature:1836143-1836193:1:exon

XP_032558460.1
type: Protein
SIO_000068: ncbiprotein

position:1825637:1
position: 1825637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1825637-1825638:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1825879-1825982:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1827005-1827057:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1827490-1827615:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1828207-1828332:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1828523-1828693:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1829896-1830027:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1831068-1831111:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1831552-1831945:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1833551-1833944:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1834543-1834664:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1836143-1836193:1:exon

MATR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: MATR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrin-3 isoform X3
translation: MGDPFMLQQSTNPAPGILGPPPPPFHLGGPPVGPRGAGNGNMQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQLLQLVEPFGIITNHLILNKINEAFIEMSTTEDAQAAVEYYSTTPALVFGKPVRVHLSQKYKRIKKPEGKPDQKTEPPKPELGRVIHLSNLPHSGYSDNAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDALAMVEHCANKALWFQGRCVKVDLSEKYKKLVLRIPNKGVELLKKDKTRKRTYSPDSKDSPSDKKSKTEAAQKPESGTTEEKVKEEKQEDPAEPSGAKSGEQAEQDEPSLLLESEDELLVDEEEAAALLESGSSAGEDADVANLADVATEEKKDTPDDVTVKSEGGNVVATPAAKKKLKKRYVGGFPRSMEGFVTLDEVGDEEDSDHQKLRKSGLAGKAGGKNEDSLAEIKVDKIEEPEQENEMLENGTKTEVTVKTEPVETSDATTAQDAEKNAQENPDPQDEQETKNIQEKPLVPDEFRIGPYQPNVPVGVNYVVPKTGFYCKLCSLFYTNEDVAKKTHCSSLPHYQKLKKILDKMAEDYRQKKEA
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: join(1825637..1825638,1825879..1825982,1827005..1827057,1827490..1827615,1828207..1828332,1828523..1828693,1829896..1830027,1831068..1831111,1831552..1831945,1833551..1833944,1834543..1834664,1836143..1836193)
location: region:1825637-1836193:1
so has part: feature:1825637-1825638:1:exon
so has part: feature:1825879-1825982:1:exon
so has part: feature:1827005-1827057:1:exon
so has part: feature:1827490-1827615:1:exon
so has part: feature:1828207-1828332:1:exon
so has part: feature:1828523-1828693:1:exon
so has part: feature:1829896-1830027:1:exon
so has part: feature:1831068-1831111:1:exon
so has part: feature:1831552-1831945:1:exon
so has part: feature:1833551-1833944:1:exon
so has part: feature:1834543-1834664:1:exon
so has part: feature:1836143-1836193:1:exon

XP_032558461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1825637-1825638:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1825879-1825982:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1827005-1827057:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1827490-1827615:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1828207-1828332:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1828523-1828693:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1829896-1830027:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1831068-1831111:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1831552-1831945:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1833551-1833944:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1834543-1834664:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1836143-1836193:1:exon

MATR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: MATR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrin-3 isoform X3
translation: MGDPFMLQQSTNPAPGILGPPPPPFHLGGPPVGPRGAGNGNMQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQLLQLVEPFGIITNHLILNKINEAFIEMSTTEDAQAAVEYYSTTPALVFGKPVRVHLSQKYKRIKKPEGKPDQKTEPPKPELGRVIHLSNLPHSGYSDNAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDALAMVEHCANKALWFQGRCVKVDLSEKYKKLVLRIPNKGVELLKKDKTRKRTYSPDSKDSPSDKKSKTEAAQKPESGTTEEKVKEEKQEDPAEPSGAKSGEQAEQDEPSLLLESEDELLVDEEEAAALLESGSSAGEDADVANLADVATEEKKDTPDDVTVKSEGGNVVATPAAKKKLKKRYVGGFPRSMEGFVTLDEVGDEEDSDHQKLRKSGLAGKAGGKNEDSLAEIKVDKIEEPEQENEMLENGTKTEVTVKTEPVETSDATTAQDAEKNAQENPDPQDEQETKNIQEKPLVPDEFRIGPYQPNVPVGVNYVVPKTGFYCKLCSLFYTNEDVAKKTHCSSLPHYQKLKKILDKMAEDYRQKKEA
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: join(1825637..1825638,1825879..1825982,1827005..1827057,1827490..1827615,1828207..1828332,1828523..1828693,1829896..1830027,1831068..1831111,1831552..1831945,1833551..1833944,1834543..1834664,1836143..1836193)
location: region:1825637-1836193:1
so has part: feature:1825637-1825638:1:exon
so has part: feature:1825879-1825982:1:exon
so has part: feature:1827005-1827057:1:exon
so has part: feature:1827490-1827615:1:exon
so has part: feature:1828207-1828332:1:exon
so has part: feature:1828523-1828693:1:exon
so has part: feature:1829896-1830027:1:exon
so has part: feature:1831068-1831111:1:exon
so has part: feature:1831552-1831945:1:exon
so has part: feature:1833551-1833944:1:exon
so has part: feature:1834543-1834664:1:exon
so has part: feature:1836143-1836193:1:exon

XP_032558462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1825637-1825638:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1825879-1825982:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1827005-1827057:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1827490-1827615:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1828207-1828332:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1828523-1828693:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1829896-1830027:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1831068-1831111:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1831552-1831945:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1833551-1833944:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1834543-1834664:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1836143-1836193:1:exon

PAIP2
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: PAIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1840111..1848563
location: region:1840111-1848563:1
so has part: feature:1840111-1848563:1:exon
subclass of: SO_0000010

116794473
type: Gene
SIO_000068: ncbigene

position:1840111:1
position: 1840111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1848563:1
position: 1848563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1840111-1848563:1:exon

PAIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PAIP2
product: poly(A) binding protein interacting protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 ESTs, 7 long SRA reads, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032703150.1
SIO_010081: PAIP2
subclass of: SO_0000673
so part of: PAIP2
location: join(1840111..1840123,1843690..1843849,1846090..1846269,1847425..1848563)
location: region:1840111-1848563:1
so has part: feature:1840111-1840123:1:exon
so has part: feature:1843690-1843849:1:exon
so has part: feature:1846090-1846269:1:exon
so has part: feature:1847425-1848563:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1840111-1840123:1:exon

position:1840123:1
position: 1840123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1843690-1843849:1:exon

position:1843690:1
position: 1843690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1843849:1
position: 1843849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1846090-1846269:1:exon

position:1846090:1
position: 1846090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1846269:1
position: 1846269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1847425-1848563:1:exon

position:1847425:1
position: 1847425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PAIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PAIP2
product: poly(A) binding protein interacting protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 41 ESTs, 7 long SRA reads, 16 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032703148.1
SIO_010081: PAIP2
subclass of: SO_0000673
so part of: PAIP2
location: join(1840121..1840236,1843690..1843849,1846090..1846269,1847425..1848563)
location: region:1840121-1848563:1
so has part: feature:1840121-1840236:1:exon
so has part: feature:1843690-1843849:1:exon
so has part: feature:1846090-1846269:1:exon
so has part: feature:1847425-1848563:1:exon

position:1840121:1
position: 1840121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1840121-1840236:1:exon

position:1840236:1
position: 1840236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1843690-1843849:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1846090-1846269:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1847425-1848563:1:exon

PAIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PAIP2
product: poly(A) binding protein interacting protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 53 ESTs, 11 long SRA reads, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_032703147.1
SIO_010081: PAIP2
subclass of: SO_0000673
so part of: PAIP2
location: join(1840132..1840236,1843684..1843849,1846090..1846269,1847425..1848563)
location: region:1840132-1848563:1
so has part: feature:1840132-1840236:1:exon
so has part: feature:1843684-1843849:1:exon
so has part: feature:1846090-1846269:1:exon
so has part: feature:1847425-1848563:1:exon

position:1840132:1
position: 1840132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1840132-1840236:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1843684-1843849:1:exon

position:1843684:1
position: 1843684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1846090-1846269:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1847425-1848563:1:exon

PAIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PAIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyadenylate-binding protein-interacting protein 2
translation: MKDPSRSSTSPSIISEDVIINGHSHEDDNPFAEYMWMENEEEFNRQIEEELWEEEFIERCFQEMLEEEEEHEWFIPARDLPQTMDQIQDQFNDLVISDSSSLEDLVVKSNLNPNAKEFVPGVKYLNI
SIO_010081: PAIP2
subclass of: SO_0000673
so part of: PAIP2
location: join(1843712..1843849,1846090..1846269,1847425..1847490)
location: region:1843712-1847490:1
so has part: feature:1843712-1843849:1:exon
so has part: feature:1846090-1846269:1:exon
so has part: feature:1847425-1847490:1:exon

XP_032559038.1
type: Protein
SIO_000068: ncbiprotein

position:1843712:1
position: 1843712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1847490:1
position: 1847490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1843712-1843849:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1846090-1846269:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1847425-1847490:1:exon

PAIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PAIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyadenylate-binding protein-interacting protein 2
translation: MKDPSRSSTSPSIISEDVIINGHSHEDDNPFAEYMWMENEEEFNRQIEEELWEEEFIERCFQEMLEEEEEHEWFIPARDLPQTMDQIQDQFNDLVISDSSSLEDLVVKSNLNPNAKEFVPGVKYLNI
SIO_010081: PAIP2
subclass of: SO_0000673
so part of: PAIP2
location: join(1843712..1843849,1846090..1846269,1847425..1847490)
location: region:1843712-1847490:1
so has part: feature:1843712-1843849:1:exon
so has part: feature:1846090-1846269:1:exon
so has part: feature:1847425-1847490:1:exon

XP_032559039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1843712-1843849:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1846090-1846269:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1847425-1847490:1:exon

PAIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PAIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyadenylate-binding protein-interacting protein 2
translation: MKDPSRSSTSPSIISEDVIINGHSHEDDNPFAEYMWMENEEEFNRQIEEELWEEEFIERCFQEMLEEEEEHEWFIPARDLPQTMDQIQDQFNDLVISDSSSLEDLVVKSNLNPNAKEFVPGVKYLNI
SIO_010081: PAIP2
subclass of: SO_0000673
so part of: PAIP2
location: join(1843712..1843849,1846090..1846269,1847425..1847490)
location: region:1843712-1847490:1
so has part: feature:1843712-1843849:1:exon
so has part: feature:1846090-1846269:1:exon
so has part: feature:1847425-1847490:1:exon

XP_032559041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1843712-1843849:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1846090-1846269:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1847425-1847490:1:exon

SLC23A1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: SLC23A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1850175..1854910)
location: region:1850175-1854910:-1
so has part: feature:1850175-1854910:-1:exon
subclass of: SO_0000010

116794553
type: Gene
SIO_000068: ncbigene

position:1850175:-1
position: 1850175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1854910:-1
position: 1854910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1850175-1854910:-1:exon

SLC23A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SLC23A1
product: solute carrier family 23 member 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 17 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032703305.1
SIO_010081: SLC23A1
subclass of: SO_0000673
so part of: SLC23A1
location: complement(join(1850175..1850875,1851006..1851101,1851243..1851386,1851600..1851729,1851807..1851912,1852031..1852178,1852359..1852515,1852619..1852739,1852839..1853020,1853106..1853173,1853253..1853341,1853434..1853591,1853703..1853807,1854021..1854092,1854598..1854910))
location: region:1850175-1854910:-1
so has part: feature:1854598-1854910:-1:exon
so has part: feature:1854021-1854092:-1:exon
so has part: feature:1853703-1853807:-1:exon
so has part: feature:1853434-1853591:-1:exon
so has part: feature:1853253-1853341:-1:exon
so has part: feature:1853106-1853173:-1:exon
so has part: feature:1852839-1853020:-1:exon
so has part: feature:1852619-1852739:-1:exon
so has part: feature:1852359-1852515:-1:exon
so has part: feature:1852031-1852178:-1:exon
so has part: feature:1851807-1851912:-1:exon
so has part: feature:1851600-1851729:-1:exon
so has part: feature:1851243-1851386:-1:exon
so has part: feature:1851006-1851101:-1:exon
so has part: feature:1850175-1850875:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1854598-1854910:-1:exon

position:1854598:-1
position: 1854598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1854021-1854092:-1:exon

position:1854021:-1
position: 1854021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1854092:-1
position: 1854092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1853703-1853807:-1:exon

position:1853703:-1
position: 1853703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1853807:-1
position: 1853807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1853434-1853591:-1:exon

position:1853434:-1
position: 1853434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1853591:-1
position: 1853591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1853253-1853341:-1:exon

position:1853253:-1
position: 1853253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1853341:-1
position: 1853341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1853106-1853173:-1:exon

position:1853106:-1
position: 1853106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1853173:-1
position: 1853173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1852839-1853020:-1:exon

position:1852839:-1
position: 1852839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1853020:-1
position: 1853020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1852619-1852739:-1:exon

position:1852619:-1
position: 1852619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1852739:-1
position: 1852739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1852359-1852515:-1:exon

position:1852359:-1
position: 1852359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1852515:-1
position: 1852515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1852031-1852178:-1:exon

position:1852031:-1
position: 1852031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1852178:-1
position: 1852178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1851807-1851912:-1:exon

position:1851807:-1
position: 1851807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1851912:-1
position: 1851912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1851600-1851729:-1:exon

position:1851600:-1
position: 1851600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1851729:-1
position: 1851729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1851243-1851386:-1:exon

position:1851243:-1
position: 1851243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1851386:-1
position: 1851386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1851006-1851101:-1:exon

position:1851006:-1
position: 1851006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1851101:-1
position: 1851101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1850175-1850875:-1:exon

position:1850875:-1
position: 1850875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC23A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SLC23A1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: solute carrier family 23 member 1
translation: MADPSRGCAPWFHNPQPMAALPPAAPATATAREVTKVLPTAIKPPXAVTSPLGTRRRRMETRSGDLAKPQNGNLAPAPAGSPQTPRKEPPAAGRQDPRVGTRPPPPEVDMLYKIEDVPPWYLCILLGFQHYLTCFSGTVAIPFLLAESMCVGKDQLTVSYLIGTIFTCVGITTLIQTTVGIRLPLFQASALAFLIPAKSILALEKWRCPPEEQIYGNWSLPLNTSHIWQPRMREIQGAIMVSSLVEVVIGLLGLPGALLSYIGPLTVTPTVSLIGLSVFQAAGERAGSHWGIAVMTILLIVLFAQYLRQVAICLPGYRRGRGFVLFRFQIFKMFPIILAIMVVWLFCYVLTRTGVFPSEPEEYGYKARTDARGEILSVAPWFRVPYPCQWGLPTVTSAAVLGMFSATLAGIIESIGDYYSCARLAGAPPPPVHAINRGIFTEGISCIIAGLLGTGNGSTSSSPNIGVLGMTKVGSRRVIQYGAGIMLLLGTVGKFTALFASLPDPVLGGMFCTLFGMITAVGLSNLQFVDMNSSRNLFVLGFAMFFGLTLPNYLDSNPGAINTGVPELDQILTVLLTTEMFVGGTIAFVLDNTIPGTQEERGLVQWKAGAHSDSTASASLRSYDFPFGMGAVRRVRWLRRVPVCPVFTGFRARARGGGAAADGQDGADGVSVCTKV
SIO_010081: SLC23A1
subclass of: SO_0000673
so part of: SLC23A1
location: complement(join(1850631..1850875,1851006..1851101,1851243..1851386,1851600..1851729,1851807..1851912,1852031..1852178,1852359..1852515,1852619..1852739,1852839..1853020,1853106..1853173,1853253..1853341,1853434..1853591,1853703..1853807,1854021..1854092,1854598..1854805))
location: region:1850631-1854805:-1
so has part: feature:1854598-1854805:-1:exon
so has part: feature:1854021-1854092:-1:exon
so has part: feature:1853703-1853807:-1:exon
so has part: feature:1853434-1853591:-1:exon
so has part: feature:1853253-1853341:-1:exon
so has part: feature:1853106-1853173:-1:exon
so has part: feature:1852839-1853020:-1:exon
so has part: feature:1852619-1852739:-1:exon
so has part: feature:1852359-1852515:-1:exon
so has part: feature:1852031-1852178:-1:exon
so has part: feature:1851807-1851912:-1:exon
so has part: feature:1851600-1851729:-1:exon
so has part: feature:1851243-1851386:-1:exon
so has part: feature:1851006-1851101:-1:exon
so has part: feature:1850631-1850875:-1:exon

XP_032559196.1
type: Protein
SIO_000068: ncbiprotein

position:1850631:-1
position: 1850631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1854805:-1
position: 1854805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1854598-1854805:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1854021-1854092:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1853703-1853807:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1853434-1853591:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1853253-1853341:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1853106-1853173:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1852839-1853020:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1852619-1852739:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1852359-1852515:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1852031-1852178:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1851807-1851912:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1851600-1851729:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1851243-1851386:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1851006-1851101:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1850631-1850875:-1:exon

MZB1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: MZB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1855001..1856661)
location: region:1855001-1856661:-1
so has part: feature:1855001-1856661:-1:exon
subclass of: SO_0000010

116794322
type: Gene
SIO_000068: ncbigene

position:1855001:-1
position: 1855001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1856661:-1
position: 1856661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1855001-1856661:-1:exon

MZB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: MZB1
product: marginal zone B and B1 cell specific protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 59% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032702917.1
SIO_010081: MZB1
subclass of: SO_0000673
so part of: MZB1
location: complement(join(1855001..1855258,1855350..1855454,1856076..1856182,1856470..1856661))
location: region:1855001-1856661:-1
so has part: feature:1856470-1856661:-1:exon
so has part: feature:1856076-1856182:-1:exon
so has part: feature:1855350-1855454:-1:exon
so has part: feature:1855001-1855258:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1856470-1856661:-1:exon

position:1856470:-1
position: 1856470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1856076-1856182:-1:exon

position:1856076:-1
position: 1856076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1856182:-1
position: 1856182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1855350-1855454:-1:exon

position:1855350:-1
position: 1855350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1855454:-1
position: 1855454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1855001-1855258:-1:exon

position:1855258:-1
position: 1855258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MZB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: MZB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: marginal zone B- and B1-cell-specific protein
translation: MGPALAAWLALSLLGGTGAEEMCGDPPAARSHSVSAPQLSPEEQLSPHMPESLRCDACRAIAFQIEEQLSRAEGKVGRKVLKESDYMEVLERSCSQGWESYGVQELDGQKRLAGPGLPSREPVSVMVSGGPWPGRLSKMCHGYVGEQGEAQIYESHRRGPAALRELLCHGAKGPCGGGKAGAPAPPKALQNEL
SIO_010081: MZB1
subclass of: SO_0000673
so part of: MZB1
location: complement(join(1855081..1855258,1855350..1855454,1856076..1856182,1856470..1856661))
location: region:1855081-1856661:-1
so has part: feature:1856470-1856661:-1:exon
so has part: feature:1856076-1856182:-1:exon
so has part: feature:1855350-1855454:-1:exon
so has part: feature:1855081-1855258:-1:exon

XP_032558808.1
type: Protein
SIO_000068: ncbiprotein

position:1855081:-1
position: 1855081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1856470-1856661:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1856076-1856182:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1855350-1855454:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1855081-1855258:-1:exon

DNAJC18
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: DNAJC18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1867999..1881098)
location: region:1867999-1881098:-1
so has part: feature:1867999-1881098:-1:exon
subclass of: SO_0000010

116794334
type: Gene
SIO_000068: ncbigene

position:1867999:-1
position: 1867999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1881098:-1
position: 1881098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1867999-1881098:-1:exon

DNAJC18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: DNAJC18
product: DnaJ heat shock protein family (Hsp40) member C18, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 34 ESTs, 5 long SRA reads, 19 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_032702928.1
SIO_010081: DNAJC18
subclass of: SO_0000673
so part of: DNAJC18
location: complement(join(1867999..1869000,1872506..1872678,1874530..1874639,1875915..1876027,1879199..1879384,1880746..1880891,1880967..1881098))
location: region:1867999-1881098:-1
so has part: feature:1880967-1881098:-1:exon
so has part: feature:1880746-1880891:-1:exon
so has part: feature:1879199-1879384:-1:exon
so has part: feature:1875915-1876027:-1:exon
so has part: feature:1874530-1874639:-1:exon
so has part: feature:1872506-1872678:-1:exon
so has part: feature:1867999-1869000:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1880967-1881098:-1:exon

position:1880967:-1
position: 1880967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1880746-1880891:-1:exon

position:1880746:-1
position: 1880746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1880891:-1
position: 1880891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1879199-1879384:-1:exon

position:1879199:-1
position: 1879199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1879384:-1
position: 1879384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1875915-1876027:-1:exon

position:1875915:-1
position: 1875915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1876027:-1
position: 1876027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1874530-1874639:-1:exon

position:1874530:-1
position: 1874530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1874639:-1
position: 1874639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1872506-1872678:-1:exon

position:1872506:-1
position: 1872506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1872678:-1
position: 1872678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1867999-1869000:-1:exon

position:1869000:-1
position: 1869000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DNAJC18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: DNAJC18
product: DnaJ heat shock protein family (Hsp40) member C18, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 21 ESTs, 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032702929.1
SIO_010081: DNAJC18
subclass of: SO_0000673
so part of: DNAJC18
location: complement(join(1867999..1869000,1872506..1872678,1874530..1874639,1875915..1876027,1879199..1879384,1879558..1879651))
location: region:1867999-1879651:-1
so has part: feature:1879558-1879651:-1:exon
so has part: feature:1879199-1879384:-1:exon
so has part: feature:1875915-1876027:-1:exon
so has part: feature:1874530-1874639:-1:exon
so has part: feature:1872506-1872678:-1:exon
so has part: feature:1867999-1869000:-1:exon

position:1879651:-1
position: 1879651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1879558-1879651:-1:exon

position:1879558:-1
position: 1879558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1879199-1879384:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1875915-1876027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1874530-1874639:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1872506-1872678:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1867999-1869000:-1:exon

DNAJC18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: DNAJC18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily C member 18 isoform X1
translation: MTYTAEQLDGVRRIKRCRDYYEILGVSRDAGEEELKRAYRRLALKFHPDKNRAPGATEAFKAIGNAFAVLSNPEKRLRYDELGSDQEHVSTGQARHYNYYTEFEADITPEEIFNVFFGGHFPTGNIHMFSNVARDAHYYPRRHRTERAWTQEQEEEDNRPQNSYSAFIQLMPVFIIIVVSVITQLMATNPPYSLFYKSSIGHVIIRETENLQVPYYVDRNFEKNYQGAELQELEKTVEKDYIDYIQTSCWKEKQQKSDLSNLAKLYRDERLKQKAESLKLEHCEKLSSLIGMHKGG
SIO_010081: DNAJC18
subclass of: SO_0000673
so part of: DNAJC18
location: complement(join(1868876..1869000,1872506..1872678,1874530..1874639,1875915..1876027,1879199..1879384,1880746..1880891,1880967..1881004))
location: region:1868876-1881004:-1
so has part: feature:1880967-1881004:-1:exon
so has part: feature:1880746-1880891:-1:exon
so has part: feature:1879199-1879384:-1:exon
so has part: feature:1875915-1876027:-1:exon
so has part: feature:1874530-1874639:-1:exon
so has part: feature:1872506-1872678:-1:exon
so has part: feature:1868876-1869000:-1:exon

XP_032558819.1
type: Protein
SIO_000068: ncbiprotein

position:1868876:-1
position: 1868876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1881004:-1
position: 1881004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1880967-1881004:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1880746-1880891:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1879199-1879384:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1875915-1876027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1874530-1874639:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1872506-1872678:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1868876-1869000:-1:exon

DNAJC18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: DNAJC18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily C member 18 isoform X2
translation: MNVSGLSIYFSTFSWHQGQQEVVSFTAIGNAFAVLSNPEKRLRYDELGSDQEHVSTGQARHYNYYTEFEADITPEEIFNVFFGGHFPTGNIHMFSNVARDAHYYPRRHRTERAWTQEQEEEDNRPQNSYSAFIQLMPVFIIIVVSVITQLMATNPPYSLFYKSSIGHVIIRETENLQVPYYVDRNFEKNYQGAELQELEKTVEKDYIDYIQTSCWKEKQQKSDLSNLAKLYRDERLKQKAESLKLEHCEKLSSLIGMHKGG
SIO_010081: DNAJC18
subclass of: SO_0000673
so part of: DNAJC18
location: complement(join(1868876..1869000,1872506..1872678,1874530..1874639,1875915..1876027,1879199..1879384,1879558..1879636))
location: region:1868876-1879636:-1
so has part: feature:1879558-1879636:-1:exon
so has part: feature:1879199-1879384:-1:exon
so has part: feature:1875915-1876027:-1:exon
so has part: feature:1874530-1874639:-1:exon
so has part: feature:1872506-1872678:-1:exon
so has part: feature:1868876-1869000:-1:exon

XP_032558820.1
type: Protein
SIO_000068: ncbiprotein

position:1879636:-1
position: 1879636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1879558-1879636:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1879199-1879384:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1875915-1876027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1874530-1874639:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1872506-1872678:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1868876-1869000:-1:exon

ECSCR
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: ECSCR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1883555..1905178)
location: region:1883555-1905178:-1
so has part: feature:1883555-1905178:-1:exon
subclass of: SO_0000010

116794335
type: Gene
SIO_000068: ncbigene

position:1883555:-1
position: 1883555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1905178:-1
position: 1905178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1883555-1905178:-1:exon

ECSCR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ECSCR
product: endothelial cell surface expressed chemotaxis and apoptosis regulator, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032702930.1
SIO_010081: ECSCR
subclass of: SO_0000673
so part of: ECSCR
location: complement(join(1883555..1884384,1884919..1885018,1886967..1887003,1887597..1887692,1888450..1888536,1889071..1889139,1890957..1891010,1891492..1891614,1893208..1893258,1893788..1893829,1905058..1905178))
location: region:1883555-1905178:-1
so has part: feature:1905058-1905178:-1:exon
so has part: feature:1893788-1893829:-1:exon
so has part: feature:1893208-1893258:-1:exon
so has part: feature:1891492-1891614:-1:exon
so has part: feature:1890957-1891010:-1:exon
so has part: feature:1889071-1889139:-1:exon
so has part: feature:1888450-1888536:-1:exon
so has part: feature:1887597-1887692:-1:exon
so has part: feature:1886967-1887003:-1:exon
so has part: feature:1884919-1885018:-1:exon
so has part: feature:1883555-1884384:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1905058-1905178:-1:exon

position:1905058:-1
position: 1905058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1893788-1893829:-1:exon

position:1893788:-1
position: 1893788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1893829:-1
position: 1893829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1893208-1893258:-1:exon

position:1893208:-1
position: 1893208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1893258:-1
position: 1893258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1891492-1891614:-1:exon

position:1891492:-1
position: 1891492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1891614:-1
position: 1891614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1890957-1891010:-1:exon

position:1890957:-1
position: 1890957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1891010:-1
position: 1891010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1889071-1889139:-1:exon

position:1889071:-1
position: 1889071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1889139:-1
position: 1889139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1888450-1888536:-1:exon

position:1888450:-1
position: 1888450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1888536:-1
position: 1888536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1887597-1887692:-1:exon

position:1887597:-1
position: 1887597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1887692:-1
position: 1887692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1886967-1887003:-1:exon

position:1886967:-1
position: 1886967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1887003:-1
position: 1887003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1884919-1885018:-1:exon

position:1884919:-1
position: 1884919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1885018:-1
position: 1885018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1883555-1884384:-1:exon

position:1884384:-1
position: 1884384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ECSCR
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 296741
gene: ECSCR
product: endothelial cell surface expressed chemotaxis and apoptosis regulator, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004359758.1
SIO_010081: ECSCR
so part of: ECSCR
location: complement(join(1883555..1884384,1884842..1885018,1886967..1887003,1887597..1887692,1888450..1888536,1889071..1889139,1890957..1891010,1891492..1891614,1893208..1893258,1893788..1893829,1905058..1905178))
location: region:1883555-1905178:-1
so has part: feature:1905058-1905178:-1:exon
so has part: feature:1893788-1893829:-1:exon
so has part: feature:1893208-1893258:-1:exon
so has part: feature:1891492-1891614:-1:exon
so has part: feature:1890957-1891010:-1:exon
so has part: feature:1889071-1889139:-1:exon
so has part: feature:1888450-1888536:-1:exon
so has part: feature:1887597-1887692:-1:exon
so has part: feature:1886967-1887003:-1:exon
so has part: feature:1884842-1885018:-1:exon
so has part: feature:1883555-1884384:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1905058-1905178:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1893788-1893829:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1893208-1893258:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1891492-1891614:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1890957-1891010:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1889071-1889139:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1888450-1888536:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1887597-1887692:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1886967-1887003:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1884842-1885018:-1:exon

position:1884842:-1
position: 1884842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1883555-1884384:-1:exon

ECSCR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ECSCR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endothelial cell-specific chemotaxis regulator
translation: MLLPSIPLLLWLFLLLPGSTASTNSSIDAVTGPPQPTTHSPEVKNHTSEPAVKPTTPPSPSPTSAGQTTTATPSTTTNTPTTLPASTGQDDKPSGNRSTAATSPTPQDQEPTRRERTTTPVPQGVPSSQRGPSEPVTPTLNSSEPTPTDDGSPLTVAAFGVISFIVILVVVVIILVSVVSLRFKCNRSKEEDKQKPGSSMVSESCSADTSQKDNSITLISMKNINMNNSMSYPPSEKVL
SIO_010081: ECSCR
subclass of: SO_0000673
so part of: ECSCR
location: complement(join(1884376..1884384,1884919..1885018,1886967..1887003,1887597..1887692,1888450..1888536,1889071..1889139,1890957..1891010,1891492..1891614,1893208..1893258,1893788..1893829,1905058..1905109))
location: region:1884376-1905109:-1
so has part: feature:1905058-1905109:-1:exon
so has part: feature:1893788-1893829:-1:exon
so has part: feature:1893208-1893258:-1:exon
so has part: feature:1891492-1891614:-1:exon
so has part: feature:1890957-1891010:-1:exon
so has part: feature:1889071-1889139:-1:exon
so has part: feature:1888450-1888536:-1:exon
so has part: feature:1887597-1887692:-1:exon
so has part: feature:1886967-1887003:-1:exon
so has part: feature:1884919-1885018:-1:exon
so has part: feature:1884376-1884384:-1:exon

XP_032558821.1
type: Protein
SIO_000068: ncbiprotein

position:1884376:-1
position: 1884376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1905109:-1
position: 1905109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1905058-1905109:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1893788-1893829:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1893208-1893258:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1891492-1891614:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1890957-1891010:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1889071-1889139:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1888450-1888536:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1887597-1887692:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1886967-1887003:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1884919-1885018:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1884376-1884384:-1:exon

SMIM33
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: SMIM33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1908091..1908492
location: region:1908091-1908492:1
so has part: feature:1908091-1908492:1:exon
subclass of: SO_0000010

116794159
type: Gene
SIO_000068: ncbigene

position:1908091:1
position: 1908091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1908492:1
position: 1908492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1908091-1908492:1:exon

SMIM33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SMIM33
product: small integral membrane protein 33
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_032702574.1
SIO_010081: SMIM33
subclass of: SO_0000673
so part of: SMIM33
location: 1908091..1908492
location: region:1908091-1908492:1
so has part: feature:1908091-1908492:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1908091-1908492:1:exon

SMIM33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SMIM33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small integral membrane protein 33
translation: MNSSVPGSQLRHPEPQDVAAVTPVSVARAVTKKADALPMISVIVVVFVLLAVFIILVVHYGPQLRTVQITLYHEPLPQDLHNGVHLTHWKQLDPQRRRDLPGMDLAGGSCQCSCKHHLPGGSAEPNVIEVTYL
SIO_010081: SMIM33
subclass of: SO_0000673
so part of: SMIM33
location: 1908091..1908492
location: region:1908091-1908492:1
so has part: feature:1908091-1908492:1:exon

XP_032558465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1908091-1908492:1:exon

PCDH12
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: PCDH12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1916672..1927215
location: region:1916672-1927215:1
so has part: feature:1916672-1927215:1:exon
subclass of: SO_0000010

116794258
type: Gene
SIO_000068: ncbigene

position:1916672:1
position: 1916672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1927215:1
position: 1927215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1916672-1927215:1:exon

PCDH12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PCDH12
product: protocadherin 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032702806.1
SIO_010081: PCDH12
subclass of: SO_0000673
so part of: PCDH12
location: join(1916672..1919548,1920026..1920120,1921280..1921431,1926370..1927215)
location: region:1916672-1927215:1
so has part: feature:1916672-1919548:1:exon
so has part: feature:1920026-1920120:1:exon
so has part: feature:1921280-1921431:1:exon
so has part: feature:1926370-1927215:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1916672-1919548:1:exon

position:1919548:1
position: 1919548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1920026-1920120:1:exon

position:1920026:1
position: 1920026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1920120:1
position: 1920120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1921280-1921431:1:exon

position:1921280:1
position: 1921280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1921431:1
position: 1921431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1926370-1927215:1:exon

position:1926370:1
position: 1926370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCDH12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PCDH12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-12
translation: MRRRAGRPLAVPRGRGTLGFASSILLLGRSALQLPALWWYLFLCADAQEVATFTVQYRVFEEVPPGTVIGTLAEHFEGGESGDTAETFQLMETPGRFPLRVGSGDGALSTAGRVDREQLCRHSDPCWVSFDVLAAQNLALIHVEVQVLDVNDNAPRFPTPELELEISESASLQTRIPLDRALDADAGPNALCSYALSPSEHFALEVISSSDGTRHAELVVVKEVDRELHSSFDLELTATDHGEPPKSGTALIKVIVLDSNDNSPIFAESSLTVEVREDALPGTLLVTVTATDPDQGPNGEIEYSLSKHAPPEVLSTFSVDARTGSIILKHPLDYEETHTYELDVQARDLGANPIPAHCKVLVKVLDVNDNAPDVHVTWAARVPVLSEALPKDSFVALVTASDPDSGSNGQVLCSLSQGDEHFRLKRTNSHSYVLMTNAALDRELRAEYNLTLVVRDLGDLSLAVLKHLTICISDVNDNAPAFDKATYEAAVAENSEAPAFLLTVRATDPDLGFNGKITYSIPDSSASGLVSVDPTTGDVFALQAFDYEQVRSLEFLVTAEDGGHPKLASNISIRLAVLDRNDNAPVITMPALVGGAATLSVLVSVETGCFWVVPGNRSTQGAAAETNTTLASCAGTPFLFTIVARDVDSGSNGALRYDLVGGDDAGLFILDPLSGQVFLNASNASSLAGSERELLVRVSDEGDTPLHTLAQLRLVFRHHGAFSKISAQDPGWLSLPVVVVICLAALLGGCLLLLALTLSLRKKEKKDGMAYNCREAEDARRQQQLKKPPRQIQKTDIHLIPLLRGRPREVEPPQPCQEDPPGTAPPVPGGYPQPPLHLTPTLYRTLRNQRTQKDSEEQQETFELPILQRRPCQPHRPKHLGKEAASPPEAPKHSKSLVKPPMGQPQLPPEQPVGAGGPGQPQPHQQILRSLVRLSLVALAEQSPTGEFAMESPPVQQISQLLSLLHQGQFQPKTNYRGNKYTAKNGSRAAGLDTDCQSTKDSGHGESEAEDRDSDSGFELSVPQLVGEELETLLEPQAELALKRLTAADPAWMARLSFPLTSSYKDNVFSPDNPHSSQEEEAARQEKPRTFETFGKGAGADSSAAGTRLTSTFLSEMSTLFEMILSQKVQVHSETGAGLLRQLSARGKGLGLEDSAAVL
SIO_010081: PCDH12
subclass of: SO_0000673
so part of: PCDH12
location: join(1916681..1919548,1920026..1920120,1921280..1921431,1926370..1926734)
location: region:1916681-1926734:1
so has part: feature:1916681-1919548:1:exon
so has part: feature:1920026-1920120:1:exon
so has part: feature:1921280-1921431:1:exon
so has part: feature:1926370-1926734:1:exon

XP_032558697.1
type: Protein
SIO_000068: ncbiprotein

position:1916681:1
position: 1916681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1926734:1
position: 1926734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1916681-1919548:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1920026-1920120:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1921280-1921431:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1926370-1926734:1:exon

DELE1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: DELE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1924388..1946960)
location: region:1924388-1946960:-1
so has part: feature:1924388-1946960:-1:exon
subclass of: SO_0000010

116794257
type: Gene
SIO_000068: ncbigene

position:1924388:-1
position: 1924388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1946960:-1
position: 1946960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1924388-1946960:-1:exon

DELE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: DELE1
product: DAP3 binding cell death enhancer 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032702805.1
SIO_010081: DELE1
subclass of: SO_0000673
so part of: DELE1
location: complement(join(1924388..1926747,1930219..1930480,1930889..1931045,1934407..1934499,1935463..1935621,1936506..1936648,1937343..1937436,1939158..1939213,1945867..1946010,1946339..1946459,1946603..1946699,1946781..1946960))
location: region:1924388-1946960:-1
so has part: feature:1946781-1946960:-1:exon
so has part: feature:1946603-1946699:-1:exon
so has part: feature:1946339-1946459:-1:exon
so has part: feature:1945867-1946010:-1:exon
so has part: feature:1939158-1939213:-1:exon
so has part: feature:1937343-1937436:-1:exon
so has part: feature:1936506-1936648:-1:exon
so has part: feature:1935463-1935621:-1:exon
so has part: feature:1934407-1934499:-1:exon
so has part: feature:1930889-1931045:-1:exon
so has part: feature:1930219-1930480:-1:exon
so has part: feature:1924388-1926747:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1946781-1946960:-1:exon

position:1946781:-1
position: 1946781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1946603-1946699:-1:exon

position:1946603:-1
position: 1946603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1946699:-1
position: 1946699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1946339-1946459:-1:exon

position:1946339:-1
position: 1946339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1946459:-1
position: 1946459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1945867-1946010:-1:exon

position:1945867:-1
position: 1945867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1946010:-1
position: 1946010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1939158-1939213:-1:exon

position:1939158:-1
position: 1939158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1939213:-1
position: 1939213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1937343-1937436:-1:exon

position:1937343:-1
position: 1937343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1937436:-1
position: 1937436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1936506-1936648:-1:exon

position:1936506:-1
position: 1936506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1936648:-1
position: 1936648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1935463-1935621:-1:exon

position:1935463:-1
position: 1935463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1935621:-1
position: 1935621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1934407-1934499:-1:exon

position:1934407:-1
position: 1934407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1934499:-1
position: 1934499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1930889-1931045:-1:exon

position:1930889:-1
position: 1930889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1931045:-1
position: 1931045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1930219-1930480:-1:exon

position:1930219:-1
position: 1930219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1930480:-1
position: 1930480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1924388-1926747:-1:exon

position:1926747:-1
position: 1926747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DELE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: DELE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: death ligand signal enhancer
translation: MWRLLLGRSWGRCGPTPARPACAPGLGQGRGHSPERAPACEDGPERGERRQPLPRLVPRYSVLEAVTWGALGALLLQLVRQVAWLRSLPDTRRERRCPWLSPLPPQHTVVTEASTSCPSEQSGSQFLQKAVPEATAENSSSGIPSGQGESQPWAEVGEFQIPASSSVGPLLHSAKGDPAQRGHLEEAAFQLQQIFRIDISIALNILGIESMRAGHCRTGFTCFKLAADRGYSKAQFNVGLCYEHGRGTEKDLEKAALYYCHAASSCHPMAQYRYGRYLLQHSPGQQWDRLQRALTFLEGAATAGITEAQAYLGVFYMRGLQPQEKRGLKYLLLAANSGDAQSRYHVGVCYEQGLGVQQNLAEALRHYREAAAAGNRHAQERLKLWEEELEDVPAKHPFPSGIRASSSSPSFWALEPVSADLHSTQPGCALTLPHSWSTDRLHVMLLSSAGWSRAFGHRTVPLERQFWEPHGCCS
SIO_010081: DELE1
subclass of: SO_0000673
so part of: DELE1
location: complement(join(1930227..1930480,1930889..1931045,1934407..1934499,1935463..1935621,1936506..1936648,1937343..1937436,1939158..1939213,1945867..1946010,1946339..1946459,1946603..1946699,1946781..1946887))
location: region:1930227-1946887:-1
so has part: feature:1946781-1946887:-1:exon
so has part: feature:1946603-1946699:-1:exon
so has part: feature:1946339-1946459:-1:exon
so has part: feature:1945867-1946010:-1:exon
so has part: feature:1939158-1939213:-1:exon
so has part: feature:1937343-1937436:-1:exon
so has part: feature:1936506-1936648:-1:exon
so has part: feature:1935463-1935621:-1:exon
so has part: feature:1934407-1934499:-1:exon
so has part: feature:1930889-1931045:-1:exon
so has part: feature:1930227-1930480:-1:exon

XP_032558696.1
type: Protein
SIO_000068: ncbiprotein

position:1930227:-1
position: 1930227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1946887:-1
position: 1946887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1946781-1946887:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1946603-1946699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1946339-1946459:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1945867-1946010:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1939158-1939213:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1937343-1937436:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1936506-1936648:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1935463-1935621:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1934407-1934499:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1930889-1931045:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1930227-1930480:-1:exon

LOC116794259
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794259
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1945833..1987888
location: region:1945833-1987888:1
so has part: feature:1945833-1987888:1:exon
subclass of: SO_0000011

116794259
type: Gene
SIO_000068: ncbigene

position:1945833:1
position: 1945833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1987888:1
position: 1987888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1945833-1987888:1:exon

LOC116794259
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116794259
product: uncharacterized LOC116794259
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004359737.1
SIO_010081: LOC116794259
subclass of: SO_0000673
so part of: LOC116794259
location: join(1945833..1946129,1960030..1960144,1962004..1962093,1987606..1987888)
location: region:1945833-1987888:1
so has part: feature:1945833-1946129:1:exon
so has part: feature:1960030-1960144:1:exon
so has part: feature:1962004-1962093:1:exon
so has part: feature:1987606-1987888:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1945833-1946129:1:exon

position:1946129:1
position: 1946129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1960030-1960144:1:exon

position:1960030:1
position: 1960030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1960144:1
position: 1960144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1962004-1962093:1:exon

position:1962004:1
position: 1962004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1962093:1
position: 1962093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1987606-1987888:1:exon

position:1987606:1
position: 1987606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116794260
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794260
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1951848..1970506)
location: region:1951848-1970506:-1
so has part: feature:1951848-1970506:-1:exon
subclass of: SO_0000011

116794260
type: Gene
SIO_000068: ncbigene

position:1951848:-1
position: 1951848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1970506:-1
position: 1970506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1951848-1970506:-1:exon

LOC116794260
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116794260
product: uncharacterized LOC116794260, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004359740.1
SIO_010081: LOC116794260
subclass of: SO_0000673
so part of: LOC116794260
location: complement(join(1951848..1954024,1956732..1956827,1970366..1970506))
location: region:1951848-1970506:-1
so has part: feature:1970366-1970506:-1:exon
so has part: feature:1956732-1956827:-1:exon
so has part: feature:1951848-1954024:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1970366-1970506:-1:exon

position:1970366:-1
position: 1970366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1956732-1956827:-1:exon

position:1956732:-1
position: 1956732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1956827:-1
position: 1956827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1951848-1954024:-1:exon

position:1954024:-1
position: 1954024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116794260
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116794260
product: uncharacterized LOC116794260, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004359739.1
SIO_010081: LOC116794260
subclass of: SO_0000673
so part of: LOC116794260
location: complement(join(1951848..1954024,1954883..1954957,1956732..1956827,1970366..1970506))
location: region:1951848-1970506:-1
so has part: feature:1970366-1970506:-1:exon
so has part: feature:1956732-1956827:-1:exon
so has part: feature:1954883-1954957:-1:exon
so has part: feature:1951848-1954024:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1970366-1970506:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1956732-1956827:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1954883-1954957:-1:exon

position:1954883:-1
position: 1954883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1954957:-1
position: 1954957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1951848-1954024:-1:exon

LOC116794260
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116794260
product: uncharacterized LOC116794260, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004359738.1
SIO_010081: LOC116794260
subclass of: SO_0000673
so part of: LOC116794260
location: complement(join(1951848..1954957,1956732..1956827,1970366..1970506))
location: region:1951848-1970506:-1
so has part: feature:1970366-1970506:-1:exon
so has part: feature:1956732-1956827:-1:exon
so has part: feature:1951848-1954957:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1970366-1970506:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1956732-1956827:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1951848-1954957:-1:exon

LOC116794428
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794428
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2059051..2061483)
location: region:2059051-2061483:-1
so has part: feature:2059051-2061483:-1:exon
subclass of: SO_0000011

116794428
type: Gene
SIO_000068: ncbigene

position:2059051:-1
position: 2059051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2061483:-1
position: 2061483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2059051-2061483:-1:exon

LOC116794428
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116794428
product: uncharacterized LOC116794428, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004359794.1
SIO_010081: LOC116794428
subclass of: SO_0000673
so part of: LOC116794428
location: complement(join(2059051..2059418,2060408..2060528,2061358..2061483))
location: region:2059051-2061483:-1
so has part: feature:2061358-2061483:-1:exon
so has part: feature:2060408-2060528:-1:exon
so has part: feature:2059051-2059418:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2061358-2061483:-1:exon

position:2061358:-1
position: 2061358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2060408-2060528:-1:exon

position:2060408:-1
position: 2060408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2060528:-1
position: 2060528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2059051-2059418:-1:exon

position:2059418:-1
position: 2059418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116794428
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116794428
product: uncharacterized LOC116794428, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004359793.1
SIO_010081: LOC116794428
subclass of: SO_0000673
so part of: LOC116794428
location: complement(join(2059051..2059418,2060276..2060528,2061358..2061483))
location: region:2059051-2061483:-1
so has part: feature:2061358-2061483:-1:exon
so has part: feature:2060276-2060528:-1:exon
so has part: feature:2059051-2059418:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2061358-2061483:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2060276-2060528:-1:exon

position:2060276:-1
position: 2060276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2059051-2059418:-1:exon

PCDH1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: PCDH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2297841..2354042)
location: region:2297841-2354042:-1
so has part: feature:2297841-2354042:-1:exon
subclass of: SO_0000010

116794175
type: Gene
SIO_000068: ncbigene

position:2297841:-1
position: 2297841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2354042:-1
position: 2354042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2297841-2354042:-1:exon

PCDH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PCDH1
product: protocadherin 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 long SRA read, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032702606.1
SIO_010081: PCDH1
subclass of: SO_0000673
so part of: PCDH1
location: complement(join(2297841..2298757,2324720..2324939,2342274..2344466,2346017..2346831,2353931..2354042))
location: region:2297841-2354042:-1
so has part: feature:2353931-2354042:-1:exon
so has part: feature:2346017-2346831:-1:exon
so has part: feature:2342274-2344466:-1:exon
so has part: feature:2324720-2324939:-1:exon
so has part: feature:2297841-2298757:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2353931-2354042:-1:exon

position:2353931:-1
position: 2353931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2346017-2346831:-1:exon

position:2346017:-1
position: 2346017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2346831:-1
position: 2346831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2342274-2344466:-1:exon

position:2342274:-1
position: 2342274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2344466:-1
position: 2344466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2324720-2324939:-1:exon

position:2324720:-1
position: 2324720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2324939:-1
position: 2324939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2297841-2298757:-1:exon

position:2298757:-1
position: 2298757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCDH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PCDH1
product: protocadherin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 long SRA read, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032702605.1
SIO_010081: PCDH1
subclass of: SO_0000673
so part of: PCDH1
location: complement(join(2297841..2298757,2324720..2324939,2342274..2344466,2346017..2346831,2352717..2353037))
location: region:2297841-2353037:-1
so has part: feature:2352717-2353037:-1:exon
so has part: feature:2346017-2346831:-1:exon
so has part: feature:2342274-2344466:-1:exon
so has part: feature:2324720-2324939:-1:exon
so has part: feature:2297841-2298757:-1:exon

position:2353037:-1
position: 2353037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2352717-2353037:-1:exon

position:2352717:-1
position: 2352717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2346017-2346831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2342274-2344466:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2324720-2324939:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2297841-2298757:-1:exon

PCDH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PCDH1
product: protocadherin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 long SRA read, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032702604.1
SIO_010081: PCDH1
subclass of: SO_0000673
so part of: PCDH1
location: complement(join(2297841..2298757,2324720..2324939,2342274..2344466,2346017..2346831,2348830..2349111))
location: region:2297841-2349111:-1
so has part: feature:2348830-2349111:-1:exon
so has part: feature:2346017-2346831:-1:exon
so has part: feature:2342274-2344466:-1:exon
so has part: feature:2324720-2324939:-1:exon
so has part: feature:2297841-2298757:-1:exon

position:2349111:-1
position: 2349111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2348830-2349111:-1:exon

position:2348830:-1
position: 2348830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2346017-2346831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2342274-2344466:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2324720-2324939:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2297841-2298757:-1:exon

PCDH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PCDH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-1 isoform X2
translation: METPRDQCAGARHGAQRRHHPTPLQRRMNPLASCLGLWLLFQLPALVSGTRVLYKVQEEQPPNTLIGSLASDYGLPDVGHLYKLEVGAPYLRVDGKTGDIYTTETSIDRESLRECQHLLPGEPCFLEFEVSITDLVQTGGPRLLEGQIEVLDINDNTPNFASPVLTLSIPENTNIGTLFPIPLAMDRDSGPNGVASYELTAGPEAQELFGLQVAEDQDEKQPQLIVMGNLDREQWDSYDLTIKVQDGGNPPRASSALLRITILDMNDNAPKFEKALYEAELSENSPVGHSVLQVKANDSDQGANAEIDYSFHQASDVVRRLLRLDRATGLITVQGPIDREDIGTLRFSVMAKDKGANPTSARTQVVITIKDMNDNAPSIEIRGIGLVTHQDGMANISEDVPVETAVALVQVSDRDEGENAVVTCVVAGDVPFQLRQASETASDSKKKYFLQTTTPLDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFSQSFTEVAFPENNEPDDLVMEVSATDADSGSNAQLVYSLVTDPASKGSFTIDPDSGEIRVKAVLDREQRERYEFAVVATDKGSPSKTGTATVAINVMDRNDNDPKFMLSGYNFSVMENMPPLSPVGMVTVIDADKGENARIQLSVEQDNGDFVIQNGTGTILSSISFDREQQSTYTFRLKAVDGGDPPRSAYVGVTINVLDENDNAPFITSPSNATYKHILPHTSPGQQVSKVKAEDIDSGVNAELIYSITGGNPFELFQISPQSGDITLEKEILRKHHGLHRLVVRVNDKGKPSRHGTALVHFYVNETLANRTLLDTLVGHSLDTPLDIDIAGDPEYERSKQRSNILFGVIAGIVAVTLVIVLVVLVRYCRQREAKSGYQAGKKETKDLYAPKQASKSGKSKSKVKKSKSPKPPKPTEDEEETGLQKSLKFNLMNDSVSDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPATNTFVGTGDNNSTGSEQYSDYSYRTNPQKYTNKQLPHRRVTFSAASQAQDLQDPSQHSYYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTRECTEFGHSDTCWMPGQSSPSRRPKNALKLSTFVPYQDRGSQEQVGNGSPRLSEERSTKMANLRLLPTYSAFSNSSHEPCKDSPMEEIPLTQTSDFQPATTPSAQTTKREIYL
SIO_010081: PCDH1
subclass of: SO_0000673
so part of: PCDH1
location: complement(join(2298372..2298757,2324720..2324939,2342274..2344466,2346017..2346831,2352717..2352780))
location: region:2298372-2352780:-1
so has part: feature:2352717-2352780:-1:exon
so has part: feature:2346017-2346831:-1:exon
so has part: feature:2342274-2344466:-1:exon
so has part: feature:2324720-2324939:-1:exon
so has part: feature:2298372-2298757:-1:exon

XP_032558496.1
type: Protein
SIO_000068: ncbiprotein

position:2298372:-1
position: 2298372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2352780:-1
position: 2352780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2352717-2352780:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2346017-2346831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2342274-2344466:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2324720-2324939:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2298372-2298757:-1:exon

PCDH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PCDH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-1 isoform X1
translation: MSLIHGEAEGWRDQELLPCGKHQRGQCRMLHLLVICTMPAPLQRRMNPLASCLGLWLLFQLPALVSGTRVLYKVQEEQPPNTLIGSLASDYGLPDVGHLYKLEVGAPYLRVDGKTGDIYTTETSIDRESLRECQHLLPGEPCFLEFEVSITDLVQTGGPRLLEGQIEVLDINDNTPNFASPVLTLSIPENTNIGTLFPIPLAMDRDSGPNGVASYELTAGPEAQELFGLQVAEDQDEKQPQLIVMGNLDREQWDSYDLTIKVQDGGNPPRASSALLRITILDMNDNAPKFEKALYEAELSENSPVGHSVLQVKANDSDQGANAEIDYSFHQASDVVRRLLRLDRATGLITVQGPIDREDIGTLRFSVMAKDKGANPTSARTQVVITIKDMNDNAPSIEIRGIGLVTHQDGMANISEDVPVETAVALVQVSDRDEGENAVVTCVVAGDVPFQLRQASETASDSKKKYFLQTTTPLDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFSQSFTEVAFPENNEPDDLVMEVSATDADSGSNAQLVYSLVTDPASKGSFTIDPDSGEIRVKAVLDREQRERYEFAVVATDKGSPSKTGTATVAINVMDRNDNDPKFMLSGYNFSVMENMPPLSPVGMVTVIDADKGENARIQLSVEQDNGDFVIQNGTGTILSSISFDREQQSTYTFRLKAVDGGDPPRSAYVGVTINVLDENDNAPFITSPSNATYKHILPHTSPGQQVSKVKAEDIDSGVNAELIYSITGGNPFELFQISPQSGDITLEKEILRKHHGLHRLVVRVNDKGKPSRHGTALVHFYVNETLANRTLLDTLVGHSLDTPLDIDIAGDPEYERSKQRSNILFGVIAGIVAVTLVIVLVVLVRYCRQREAKSGYQAGKKETKDLYAPKQASKSGKSKSKVKKSKSPKPPKPTEDEEETGLQKSLKFNLMNDSVSDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPATNTFVGTGDNNSTGSEQYSDYSYRTNPQKYTNKQLPHRRVTFSAASQAQDLQDPSQHSYYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTRECTEFGHSDTCWMPGQSSPSRRPKNALKLSTFVPYQDRGSQEQVGNGSPRLSEERSTKMANLRLLPTYSAFSNSSHEPCKDSPMEEIPLTQTSDFQPATTPSAQTTKREIYL
SIO_010081: PCDH1
subclass of: SO_0000673
so part of: PCDH1
location: complement(join(2298372..2298757,2324720..2324939,2342274..2344466,2346017..2346831,2348830..2348947))
location: region:2298372-2348947:-1
so has part: feature:2348830-2348947:-1:exon
so has part: feature:2346017-2346831:-1:exon
so has part: feature:2342274-2344466:-1:exon
so has part: feature:2324720-2324939:-1:exon
so has part: feature:2298372-2298757:-1:exon

XP_032558495.1
type: Protein
SIO_000068: ncbiprotein

position:2348947:-1
position: 2348947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2348830-2348947:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2346017-2346831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2342274-2344466:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2324720-2324939:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2298372-2298757:-1:exon

PCDH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PCDH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-1 isoform X3
translation: MNPLASCLGLWLLFQLPALVSGTRVLYKVQEEQPPNTLIGSLASDYGLPDVGHLYKLEVGAPYLRVDGKTGDIYTTETSIDRESLRECQHLLPGEPCFLEFEVSITDLVQTGGPRLLEGQIEVLDINDNTPNFASPVLTLSIPENTNIGTLFPIPLAMDRDSGPNGVASYELTAGPEAQELFGLQVAEDQDEKQPQLIVMGNLDREQWDSYDLTIKVQDGGNPPRASSALLRITILDMNDNAPKFEKALYEAELSENSPVGHSVLQVKANDSDQGANAEIDYSFHQASDVVRRLLRLDRATGLITVQGPIDREDIGTLRFSVMAKDKGANPTSARTQVVITIKDMNDNAPSIEIRGIGLVTHQDGMANISEDVPVETAVALVQVSDRDEGENAVVTCVVAGDVPFQLRQASETASDSKKKYFLQTTTPLDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFSQSFTEVAFPENNEPDDLVMEVSATDADSGSNAQLVYSLVTDPASKGSFTIDPDSGEIRVKAVLDREQRERYEFAVVATDKGSPSKTGTATVAINVMDRNDNDPKFMLSGYNFSVMENMPPLSPVGMVTVIDADKGENARIQLSVEQDNGDFVIQNGTGTILSSISFDREQQSTYTFRLKAVDGGDPPRSAYVGVTINVLDENDNAPFITSPSNATYKHILPHTSPGQQVSKVKAEDIDSGVNAELIYSITGGNPFELFQISPQSGDITLEKEILRKHHGLHRLVVRVNDKGKPSRHGTALVHFYVNETLANRTLLDTLVGHSLDTPLDIDIAGDPEYERSKQRSNILFGVIAGIVAVTLVIVLVVLVRYCRQREAKSGYQAGKKETKDLYAPKQASKSGKSKSKVKKSKSPKPPKPTEDEEETGLQKSLKFNLMNDSVSDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPATNTFVGTGDNNSTGSEQYSDYSYRTNPQKYTNKQLPHRRVTFSAASQAQDLQDPSQHSYYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTRECTEFGHSDTCWMPGQSSPSRRPKNALKLSTFVPYQDRGSQEQVGNGSPRLSEERSTKMANLRLLPTYSAFSNSSHEPCKDSPMEEIPLTQTSDFQPATTPSAQTTKREIYL
SIO_010081: PCDH1
subclass of: SO_0000673
so part of: PCDH1
location: complement(join(2298372..2298757,2324720..2324939,2342274..2344466,2346017..2346814))
location: region:2298372-2346814:-1
so has part: feature:2346017-2346814:-1:exon
so has part: feature:2342274-2344466:-1:exon
so has part: feature:2324720-2324939:-1:exon
so has part: feature:2298372-2298757:-1:exon

XP_032558497.1
type: Protein
SIO_000068: ncbiprotein

position:2346814:-1
position: 2346814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2346017-2346814:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2342274-2344466:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2324720-2324939:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2298372-2298757:-1:exon

PCDH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PCDH1
product: protocadherin 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032702607.1
SIO_010081: PCDH1
subclass of: SO_0000673
so part of: PCDH1
location: complement(join(2298649..2298757,2300600..2300642,2324720..2324939,2342274..2344466,2346017..2346831,2348830..2349115))
location: region:2298649-2349115:-1
so has part: feature:2348830-2349115:-1:exon
so has part: feature:2346017-2346831:-1:exon
so has part: feature:2342274-2344466:-1:exon
so has part: feature:2324720-2324939:-1:exon
so has part: feature:2300600-2300642:-1:exon
so has part: feature:2298649-2298757:-1:exon

position:2298649:-1
position: 2298649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2349115:-1
position: 2349115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2348830-2349115:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2346017-2346831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2342274-2344466:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2324720-2324939:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2300600-2300642:-1:exon

position:2300600:-1
position: 2300600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2300642:-1
position: 2300642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2298649-2298757:-1:exon

PCDH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PCDH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-1 isoform X4
translation: MSLIHGEAEGWRDQELLPCGKHQRGQCRMLHLLVICTMPAPLQRRMNPLASCLGLWLLFQLPALVSGTRVLYKVQEEQPPNTLIGSLASDYGLPDVGHLYKLEVGAPYLRVDGKTGDIYTTETSIDRESLRECQHLLPGEPCFLEFEVSITDLVQTGGPRLLEGQIEVLDINDNTPNFASPVLTLSIPENTNIGTLFPIPLAMDRDSGPNGVASYELTAGPEAQELFGLQVAEDQDEKQPQLIVMGNLDREQWDSYDLTIKVQDGGNPPRASSALLRITILDMNDNAPKFEKALYEAELSENSPVGHSVLQVKANDSDQGANAEIDYSFHQASDVVRRLLRLDRATGLITVQGPIDREDIGTLRFSVMAKDKGANPTSARTQVVITIKDMNDNAPSIEIRGIGLVTHQDGMANISEDVPVETAVALVQVSDRDEGENAVVTCVVAGDVPFQLRQASETASDSKKKYFLQTTTPLDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFSQSFTEVAFPENNEPDDLVMEVSATDADSGSNAQLVYSLVTDPASKGSFTIDPDSGEIRVKAVLDREQRERYEFAVVATDKGSPSKTGTATVAINVMDRNDNDPKFMLSGYNFSVMENMPPLSPVGMVTVIDADKGENARIQLSVEQDNGDFVIQNGTGTILSSISFDREQQSTYTFRLKAVDGGDPPRSAYVGVTINVLDENDNAPFITSPSNATYKHILPHTSPGQQVSKVKAEDIDSGVNAELIYSITGGNPFELFQISPQSGDITLEKEILRKHHGLHRLVVRVNDKGKPSRHGTALVHFYVNETLANRTLLDTLVGHSLDTPLDIDIAGDPEYERSKQRSNILFGVIAGIVAVTLVIVLVVLVRYCRQREAKSGYQAGKKETKDLYAPKQASKSGKSKSKVKKSKSPKPPKPTEDEEETGLQKSLKFNLMNDSVSDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPATNTFVGTGDNNSTGSEQYSDYSYRTNPQKYTNKQLPHRRVTFSAASQAQDLQDPSQHSYYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENESPERSRL
SIO_010081: PCDH1
subclass of: SO_0000673
so part of: PCDH1
location: complement(join(2300617..2300642,2324720..2324939,2342274..2344466,2346017..2346831,2348830..2348947))
location: region:2300617-2348947:-1
so has part: feature:2348830-2348947:-1:exon
so has part: feature:2346017-2346831:-1:exon
so has part: feature:2342274-2344466:-1:exon
so has part: feature:2324720-2324939:-1:exon
so has part: feature:2300617-2300642:-1:exon

XP_032558498.1
type: Protein
SIO_000068: ncbiprotein

position:2300617:-1
position: 2300617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2348830-2348947:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2346017-2346831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2342274-2344466:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2324720-2324939:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2300617-2300642:-1:exon

PCDH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PCDH1
product: protocadherin 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032702608.1
SIO_010081: PCDH1
subclass of: SO_0000673
so part of: PCDH1
location: complement(join(2313706..2314305,2324720..2324939,2342274..2344466,2346017..2346831,2348830..2349115))
location: region:2313706-2349115:-1
so has part: feature:2348830-2349115:-1:exon
so has part: feature:2346017-2346831:-1:exon
so has part: feature:2342274-2344466:-1:exon
so has part: feature:2324720-2324939:-1:exon
so has part: feature:2313706-2314305:-1:exon

position:2313706:-1
position: 2313706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2348830-2349115:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2346017-2346831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2342274-2344466:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2324720-2324939:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2313706-2314305:-1:exon

position:2314305:-1
position: 2314305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCDH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PCDH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-1 isoform X5
translation: MSLIHGEAEGWRDQELLPCGKHQRGQCRMLHLLVICTMPAPLQRRMNPLASCLGLWLLFQLPALVSGTRVLYKVQEEQPPNTLIGSLASDYGLPDVGHLYKLEVGAPYLRVDGKTGDIYTTETSIDRESLRECQHLLPGEPCFLEFEVSITDLVQTGGPRLLEGQIEVLDINDNTPNFASPVLTLSIPENTNIGTLFPIPLAMDRDSGPNGVASYELTAGPEAQELFGLQVAEDQDEKQPQLIVMGNLDREQWDSYDLTIKVQDGGNPPRASSALLRITILDMNDNAPKFEKALYEAELSENSPVGHSVLQVKANDSDQGANAEIDYSFHQASDVVRRLLRLDRATGLITVQGPIDREDIGTLRFSVMAKDKGANPTSARTQVVITIKDMNDNAPSIEIRGIGLVTHQDGMANISEDVPVETAVALVQVSDRDEGENAVVTCVVAGDVPFQLRQASETASDSKKKYFLQTTTPLDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFSQSFTEVAFPENNEPDDLVMEVSATDADSGSNAQLVYSLVTDPASKGSFTIDPDSGEIRVKAVLDREQRERYEFAVVATDKGSPSKTGTATVAINVMDRNDNDPKFMLSGYNFSVMENMPPLSPVGMVTVIDADKGENARIQLSVEQDNGDFVIQNGTGTILSSISFDREQQSTYTFRLKAVDGGDPPRSAYVGVTINVLDENDNAPFITSPSNATYKHILPHTSPGQQVSKVKAEDIDSGVNAELIYSITGGNPFELFQISPQSGDITLEKEILRKHHGLHRLVVRVNDKGKPSRHGTALVHFYVNETLANRTLLDTLVGHSLDTPLDIDIAGDPEYERSKQRSNILFGVIAGIVAVTLVIVLVVLVRYCRQREAKSGYQAGKKETKDLYAPKQASKSGKSKSKVKKSKSPKPPKPTEDEEETGLQKSLKFNLMNDSVSDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPATNTFVGTGDNNSTGSEQYSDYSYRTNPQKYTNKQLPHRRVTFSAASQAQDLQDPSQHSYYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENAV
SIO_010081: PCDH1
subclass of: SO_0000673
so part of: PCDH1
location: complement(join(2314298..2314305,2324720..2324939,2342274..2344466,2346017..2346831,2348830..2348947))
location: region:2314298-2348947:-1
so has part: feature:2348830-2348947:-1:exon
so has part: feature:2346017-2346831:-1:exon
so has part: feature:2342274-2344466:-1:exon
so has part: feature:2324720-2324939:-1:exon
so has part: feature:2314298-2314305:-1:exon

XP_032558499.1
type: Protein
SIO_000068: ncbiprotein

position:2314298:-1
position: 2314298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2348830-2348947:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2346017-2346831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2342274-2344466:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2324720-2324939:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2314298-2314305:-1:exon

LOC116794176
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794176
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2358763..2360170)
location: region:2358763-2360170:-1
so has part: feature:2358763-2360170:-1:exon
subclass of: SO_0000011

116794176
type: Gene
SIO_000068: ncbigene

position:2358763:-1
position: 2358763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2360170:-1
position: 2360170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2358763-2360170:-1:exon

LOC116794176
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116794176
product: uncharacterized LOC116794176
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004359717.1
SIO_010081: LOC116794176
subclass of: SO_0000673
so part of: LOC116794176
location: complement(join(2358763..2358910,2359848..2360170))
location: region:2358763-2360170:-1
so has part: feature:2359848-2360170:-1:exon
so has part: feature:2358763-2358910:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2359848-2360170:-1:exon

position:2359848:-1
position: 2359848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2358763-2358910:-1:exon

position:2358910:-1
position: 2358910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116794342
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794342
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2491492..2497510
location: region:2491492-2497510:1
so has part: feature:2491492-2497510:1:exon
subclass of: SO_0000010

116794342
type: Gene
SIO_000068: ncbigene

position:2491492:1
position: 2491492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2497510:1
position: 2497510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2491492-2497510:1:exon

LOC116794342
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794342
product: START domain-containing protein 10-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032702937.1
SIO_010081: LOC116794342
subclass of: SO_0000673
so part of: LOC116794342
location: join(2491492..2491854,2495062..2495209,2495314..2495417,2495510..2495627,2495859..2495911,2496553..2497510)
location: region:2491492-2497510:1
so has part: feature:2491492-2491854:1:exon
so has part: feature:2495062-2495209:1:exon
so has part: feature:2495314-2495417:1:exon
so has part: feature:2495510-2495627:1:exon
so has part: feature:2495859-2495911:1:exon
so has part: feature:2496553-2497510:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2491492-2491854:1:exon

position:2491854:1
position: 2491854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2495062-2495209:1:exon

position:2495062:1
position: 2495062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2495209:1
position: 2495209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2495314-2495417:1:exon

position:2495314:1
position: 2495314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2495417:1
position: 2495417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2495510-2495627:1:exon

position:2495510:1
position: 2495510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2495627:1
position: 2495627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2495859-2495911:1:exon

position:2495859:1
position: 2495859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2495911:1
position: 2495911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2496553-2497510:1:exon

position:2496553:1
position: 2496553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116794342
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794342
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: START domain-containing protein 10-like
translation: MSRGGEMVYIPDDSDFSSFRDQCESLEGWHCRYNKAGVTVWSQGQEESCTVQKIKTRISCKDVPAETLYDVLHDTSYRKKWDSNMIETYDIGRLTVNADVGYYSWKCPSPLKNRDFVTLRSWLPLGNDYMIINYSVKHPNYPPRKDFVRAVSLQTGYLIKANGDGACVLYYLTQVDPRGSLPKWVVNRVSQFVAPKAMKKIYKAGLKYPEWKRKHDPEYKPWVYPEQNTLPSVSLAELSVQHADSLENIDETGLSEDHLSTSDHEA
SIO_010081: LOC116794342
subclass of: SO_0000673
so part of: LOC116794342
location: join(2491690..2491854,2495062..2495209,2495314..2495417,2495510..2495627,2495859..2495911,2496553..2496765)
location: region:2491690-2496765:1
so has part: feature:2491690-2491854:1:exon
so has part: feature:2495062-2495209:1:exon
so has part: feature:2495314-2495417:1:exon
so has part: feature:2495510-2495627:1:exon
so has part: feature:2495859-2495911:1:exon
so has part: feature:2496553-2496765:1:exon

XP_032558828.1
type: Protein
SIO_000068: ncbiprotein

position:2491690:1
position: 2491690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2496765:1
position: 2496765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2491690-2491854:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2495062-2495209:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2495314-2495417:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2495510-2495627:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2495859-2495911:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2496553-2496765:1:exon

ARAP3
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: ARAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2502554..2523001
location: region:2502554-2523001:1
so has part: feature:2502554-2523001:1:exon
subclass of: SO_0000010

116794542
type: Gene
SIO_000068: ncbigene

position:2502554:1
position: 2502554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2523001:1
position: 2523001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2502554-2523001:1:exon

ARAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ARAP3
product: ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032703284.1
SIO_010081: ARAP3
subclass of: SO_0000673
so part of: ARAP3
location: join(2502554..2502659,2504264..2505376,2505931..2505992,2506303..2506376,2506809..2506879,2511063..2511332,2511774..2511843,2512292..2512412,2512587..2512774,2513591..2513697,2513804..2514003,2514136..2514221,2514392..2514574,2514793..2514955,2515258..2515389,2515462..2515615,2515763..2515865,2516069..2516267,2516353..2516416,2516713..2516876,2516986..2517198,2517364..2517469,2517997..2518144,2518289..2518357,2518649..2518723,2518846..2518960,2519122..2519250,2519431..2519564,2519709..2519791,2520001..2520036,2520472..2520535,2520648..2520785,2521121..2521159,2521824..2523001)
location: region:2502554-2523001:1
so has part: feature:2502554-2502659:1:exon
so has part: feature:2504264-2505376:1:exon
so has part: feature:2505931-2505992:1:exon
so has part: feature:2506303-2506376:1:exon
so has part: feature:2506809-2506879:1:exon
so has part: feature:2511063-2511332:1:exon
so has part: feature:2511774-2511843:1:exon
so has part: feature:2512292-2512412:1:exon
so has part: feature:2512587-2512774:1:exon
so has part: feature:2513591-2513697:1:exon
so has part: feature:2513804-2514003:1:exon
so has part: feature:2514136-2514221:1:exon
so has part: feature:2514392-2514574:1:exon
so has part: feature:2514793-2514955:1:exon
so has part: feature:2515258-2515389:1:exon
so has part: feature:2515462-2515615:1:exon
so has part: feature:2515763-2515865:1:exon
so has part: feature:2516069-2516267:1:exon
so has part: feature:2516353-2516416:1:exon
so has part: feature:2516713-2516876:1:exon
so has part: feature:2516986-2517198:1:exon
so has part: feature:2517364-2517469:1:exon
so has part: feature:2517997-2518144:1:exon
so has part: feature:2518289-2518357:1:exon
so has part: feature:2518649-2518723:1:exon
so has part: feature:2518846-2518960:1:exon
so has part: feature:2519122-2519250:1:exon
so has part: feature:2519431-2519564:1:exon
so has part: feature:2519709-2519791:1:exon
so has part: feature:2520001-2520036:1:exon
so has part: feature:2520472-2520535:1:exon
so has part: feature:2520648-2520785:1:exon
so has part: feature:2521121-2521159:1:exon
so has part: feature:2521824-2523001:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2502554-2502659:1:exon

position:2502659:1
position: 2502659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2504264-2505376:1:exon

position:2504264:1
position: 2504264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2505376:1
position: 2505376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2505931-2505992:1:exon

position:2505931:1
position: 2505931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2505992:1
position: 2505992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2506303-2506376:1:exon

position:2506303:1
position: 2506303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2506376:1
position: 2506376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2506809-2506879:1:exon

position:2506809:1
position: 2506809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2506879:1
position: 2506879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2511063-2511332:1:exon

position:2511063:1
position: 2511063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2511332:1
position: 2511332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2511774-2511843:1:exon

position:2511774:1
position: 2511774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2511843:1
position: 2511843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2512292-2512412:1:exon

position:2512292:1
position: 2512292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2512412:1
position: 2512412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2512587-2512774:1:exon

position:2512587:1
position: 2512587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2512774:1
position: 2512774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2513591-2513697:1:exon

position:2513591:1
position: 2513591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2513697:1
position: 2513697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2513804-2514003:1:exon

position:2513804:1
position: 2513804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2514003:1
position: 2514003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2514136-2514221:1:exon

position:2514136:1
position: 2514136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2514221:1
position: 2514221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2514392-2514574:1:exon

position:2514392:1
position: 2514392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2514574:1
position: 2514574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2514793-2514955:1:exon

position:2514793:1
position: 2514793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2514955:1
position: 2514955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2515258-2515389:1:exon

position:2515258:1
position: 2515258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2515389:1
position: 2515389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2515462-2515615:1:exon

position:2515462:1
position: 2515462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2515615:1
position: 2515615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2515763-2515865:1:exon

position:2515763:1
position: 2515763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2515865:1
position: 2515865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2516069-2516267:1:exon

position:2516069:1
position: 2516069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2516267:1
position: 2516267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2516353-2516416:1:exon

position:2516353:1
position: 2516353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2516416:1
position: 2516416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2516713-2516876:1:exon

position:2516713:1
position: 2516713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2516876:1
position: 2516876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2516986-2517198:1:exon

position:2516986:1
position: 2516986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2517198:1
position: 2517198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2517364-2517469:1:exon

position:2517364:1
position: 2517364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2517469:1
position: 2517469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2517997-2518144:1:exon

position:2517997:1
position: 2517997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2518144:1
position: 2518144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2518289-2518357:1:exon

position:2518289:1
position: 2518289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2518357:1
position: 2518357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2518649-2518723:1:exon

position:2518649:1
position: 2518649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2518723:1
position: 2518723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2518846-2518960:1:exon

position:2518846:1
position: 2518846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2518960:1
position: 2518960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2519122-2519250:1:exon

position:2519122:1
position: 2519122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2519250:1
position: 2519250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2519431-2519564:1:exon

position:2519431:1
position: 2519431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2519564:1
position: 2519564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2519709-2519791:1:exon

position:2519709:1
position: 2519709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2519791:1
position: 2519791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2520001-2520036:1:exon

position:2520001:1
position: 2520001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2520036:1
position: 2520036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2520472-2520535:1:exon

position:2520472:1
position: 2520472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2520535:1
position: 2520535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:2520648-2520785:1:exon

position:2520648:1
position: 2520648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2520785:1
position: 2520785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:2521121-2521159:1:exon

position:2521121:1
position: 2521121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2521159:1
position: 2521159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:2521824-2523001:1:exon

position:2521824:1
position: 2521824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ARAP3
product: ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032703285.1
SIO_010081: ARAP3
subclass of: SO_0000673
so part of: ARAP3
location: join(2502554..2502659,2504264..2505376,2505931..2505992,2506303..2506376,2506809..2506873,2511057..2511332,2511774..2511843,2512292..2512412,2512587..2512774,2513591..2513697,2513804..2514003,2514136..2514221,2514392..2514574,2514793..2514955,2515258..2515389,2515462..2515615,2515763..2515865,2516069..2516267,2516353..2516416,2516713..2516876,2516986..2517198,2517364..2517469,2517997..2518144,2518289..2518357,2518649..2518723,2518846..2518960,2519122..2519250,2519431..2519564,2519709..2519791,2520001..2520036,2520472..2520535,2520648..2520785,2521121..2521159,2521824..2523001)
location: region:2502554-2523001:1
so has part: feature:2502554-2502659:1:exon
so has part: feature:2504264-2505376:1:exon
so has part: feature:2505931-2505992:1:exon
so has part: feature:2506303-2506376:1:exon
so has part: feature:2506809-2506873:1:exon
so has part: feature:2511057-2511332:1:exon
so has part: feature:2511774-2511843:1:exon
so has part: feature:2512292-2512412:1:exon
so has part: feature:2512587-2512774:1:exon
so has part: feature:2513591-2513697:1:exon
so has part: feature:2513804-2514003:1:exon
so has part: feature:2514136-2514221:1:exon
so has part: feature:2514392-2514574:1:exon
so has part: feature:2514793-2514955:1:exon
so has part: feature:2515258-2515389:1:exon
so has part: feature:2515462-2515615:1:exon
so has part: feature:2515763-2515865:1:exon
so has part: feature:2516069-2516267:1:exon
so has part: feature:2516353-2516416:1:exon
so has part: feature:2516713-2516876:1:exon
so has part: feature:2516986-2517198:1:exon
so has part: feature:2517364-2517469:1:exon
so has part: feature:2517997-2518144:1:exon
so has part: feature:2518289-2518357:1:exon
so has part: feature:2518649-2518723:1:exon
so has part: feature:2518846-2518960:1:exon
so has part: feature:2519122-2519250:1:exon
so has part: feature:2519431-2519564:1:exon
so has part: feature:2519709-2519791:1:exon
so has part: feature:2520001-2520036:1:exon
so has part: feature:2520472-2520535:1:exon
so has part: feature:2520648-2520785:1:exon
so has part: feature:2521121-2521159:1:exon
so has part: feature:2521824-2523001:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2502554-2502659:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2504264-2505376:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2505931-2505992:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2506303-2506376:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2506809-2506873:1:exon

position:2506873:1
position: 2506873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2511057-2511332:1:exon

position:2511057:1
position: 2511057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2511774-2511843:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2512292-2512412:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2512587-2512774:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2513591-2513697:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2513804-2514003:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2514136-2514221:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2514392-2514574:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2514793-2514955:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2515258-2515389:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2515462-2515615:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2515763-2515865:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2516069-2516267:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2516353-2516416:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2516713-2516876:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2516986-2517198:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2517364-2517469:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2517997-2518144:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2518289-2518357:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2518649-2518723:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2518846-2518960:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2519122-2519250:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2519431-2519564:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2519709-2519791:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2520001-2520036:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2520472-2520535:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2520648-2520785:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2521121-2521159:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2521824-2523001:1:exon

ARAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ARAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 isoform X1
translation: MSSPCGPDSDIADWLATIHLQRYRDAFKQHGYHVARDAASLDGHDLQQIGITATGHRKRILSLAQQTRMLSQSHTGRAAGDTPSRATEALDAPQVGKDAMKAQPGGTTDAFRTQQRVAAPSQASPVEKDPAPPVAKPVPKPRTVFPRSKPEQGSVPVPPARSTVPARGPGSGGAPAAFVVLEGFVPGESSTDLERPEPRPAPPADPGAAAAMGVITSRLRARESPREETRPSPAPNHGQTLEPSEKSPPSVPSVPPRHSHRVLAAEPSPGNVPEGHPRSHPPLLATAAPARRDPSPCPRAGAGQGRLEMVSNVIYEGLERPAAPAEDSGGEDGPQGEGLAQPPALSPQELTQPDDKPDSPGWPSGALPLVPQRPTGKPEVNEQPISPYSETIFGHVAPSRDLKGVGISAGQSYEAVSELDLEREVCRTSSECSSEGRSEDEETRSRLIDRIVQNDTEGYSTVEAPRAEGAPFSLPAHLYPDEVLDDLTISPYASFTSLSEPRPTMLSGWLDKLSPQGNYVFQRRYVRFDGKNLMYFSSEKEPYPKGVIPLSVIEMARSNKDNKFQVVTGHRIFVFRAENEAQRNEWCSTLQKKVMDQRLVGSRPRPANTAHCQKSGTLELKGQKSKVFAALSLPEMWLYKSEQFFKMGIGMFFIEMRGSTIREAKNRSFELITPSKTFSFVAESEREKREWMEALQEAMAEMLYDYEVAEKIWSNKANKYCADCWAQSPDWASINLCVVICKQCAGQHRSLGSNISKVQSLKLDTSVWSNEIVQLFIVLGNDRANRFWAARLPASEAIHPDSSAEQRREFISRKYREGRYRLPHPHCPTQEDVLQALCTAVAGPTLLKTILQFFSSSEAGLASDPAASEAAPGADLWWGLESKRPRNLSGSPRAREPGPEGVYNEITQPVAHSGYLHRATAPAKLPGAKKSKEDFQRTWCSLERSLLFFETEKCTEPLGHIESGDLLSLGVSRAQALTSPCPTERFRFTLELFLTGEKVQQLGTDGPETLQAWASAIGKWFTPVSCHCLLGYEFQRVGQLRYKCMLNPERWQQAFFILQKAHLFICPAEEDGAEDSINLRRLQELSLVPPTETPDKKEMLILVEMGRTFYLQGLSRVDSAAWYTDIQASAGGRGNALRDQQLSRGDIPIIVDSCIAFITQYGLRHEGIYRKNGAKSRIKVLMEEFRRDARNVKLRINDNFIEDVTDVLKRFFRELEDPIFTLELHPQWKEAAEIPSKPQRLERYKELIHRLPRLNHKTLAALIGHLYRVQKCADLNQMSTKNLSLLFAPSLFQTDGKGEHEVKVMEDLIDNYVSIFNIDEDQVSQMDLENSLITTWKDTQLSQAGDLIIEVYLEQKLPDCCVTLKVSPTMTAEELTNQVLEMRNVAASLDIWLTFEALENGELERPLHPKEKVLEQALQWCKLPEPSAAYLLVRKVPIGEGSCLFTGVKRESPKCGLLKCREEPPKLLGNKFQERYFVIRDRRLLLLKEKRSSKPEREWPLDAAKVYMGIKKKLKPPAQWGFTLTLDKQQLCLVCSGQAELWDWTTSILKAQHDDRHPVILRRRSSSDLAKQKFGTMPLVPLHGDSTDATMLSANQTLRRLHTRRTLSMFFPMKIHQDSLEEQQEKEVDADPVYEEVGNFPELAVLDLGQGLLADLSAVPPVDRSKKPAPFPEQPPATPLRSSLPASPARRVTGPSVTKAVSLERGLNLESGKAPTQGLRPTKTASLERNVEPSLALDGDWEQAVTPGSSPGAESSLELPRKRSLQPPSPINDKLIQELSSVILRKSDGQTPGSGQPVT
SIO_010081: ARAP3
subclass of: SO_0000673
so part of: ARAP3
location: join(2504304..2505376,2505931..2505992,2506303..2506376,2506809..2506879,2511063..2511332,2511774..2511843,2512292..2512412,2512587..2512774,2513591..2513697,2513804..2514003,2514136..2514221,2514392..2514574,2514793..2514955,2515258..2515389,2515462..2515615,2515763..2515865,2516069..2516267,2516353..2516416,2516713..2516876,2516986..2517198,2517364..2517469,2517997..2518144,2518289..2518357,2518649..2518723,2518846..2518960,2519122..2519250,2519431..2519564,2519709..2519791,2520001..2520036,2520472..2520535,2520648..2520785,2521121..2521159,2521824..2522390)
location: region:2504304-2522390:1
so has part: feature:2504304-2505376:1:exon
so has part: feature:2505931-2505992:1:exon
so has part: feature:2506303-2506376:1:exon
so has part: feature:2506809-2506879:1:exon
so has part: feature:2511063-2511332:1:exon
so has part: feature:2511774-2511843:1:exon
so has part: feature:2512292-2512412:1:exon
so has part: feature:2512587-2512774:1:exon
so has part: feature:2513591-2513697:1:exon
so has part: feature:2513804-2514003:1:exon
so has part: feature:2514136-2514221:1:exon
so has part: feature:2514392-2514574:1:exon
so has part: feature:2514793-2514955:1:exon
so has part: feature:2515258-2515389:1:exon
so has part: feature:2515462-2515615:1:exon
so has part: feature:2515763-2515865:1:exon
so has part: feature:2516069-2516267:1:exon
so has part: feature:2516353-2516416:1:exon
so has part: feature:2516713-2516876:1:exon
so has part: feature:2516986-2517198:1:exon
so has part: feature:2517364-2517469:1:exon
so has part: feature:2517997-2518144:1:exon
so has part: feature:2518289-2518357:1:exon
so has part: feature:2518649-2518723:1:exon
so has part: feature:2518846-2518960:1:exon
so has part: feature:2519122-2519250:1:exon
so has part: feature:2519431-2519564:1:exon
so has part: feature:2519709-2519791:1:exon
so has part: feature:2520001-2520036:1:exon
so has part: feature:2520472-2520535:1:exon
so has part: feature:2520648-2520785:1:exon
so has part: feature:2521121-2521159:1:exon
so has part: feature:2521824-2522390:1:exon

XP_032559175.1
type: Protein
SIO_000068: ncbiprotein

position:2504304:1
position: 2504304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2522390:1
position: 2522390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2504304-2505376:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2505931-2505992:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2506303-2506376:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2506809-2506879:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2511063-2511332:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2511774-2511843:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2512292-2512412:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2512587-2512774:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2513591-2513697:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2513804-2514003:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2514136-2514221:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2514392-2514574:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2514793-2514955:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2515258-2515389:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2515462-2515615:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2515763-2515865:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2516069-2516267:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2516353-2516416:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2516713-2516876:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2516986-2517198:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2517364-2517469:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2517997-2518144:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2518289-2518357:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2518649-2518723:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2518846-2518960:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2519122-2519250:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2519431-2519564:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2519709-2519791:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2520001-2520036:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2520472-2520535:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2520648-2520785:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2521121-2521159:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2521824-2522390:1:exon

ARAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ARAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 isoform X2
translation: MSSPCGPDSDIADWLATIHLQRYRDAFKQHGYHVARDAASLDGHDLQQIGITATGHRKRILSLAQQTRMLSQSHTGRAAGDTPSRATEALDAPQVGKDAMKAQPGGTTDAFRTQQRVAAPSQASPVEKDPAPPVAKPVPKPRTVFPRSKPEQGSVPVPPARSTVPARGPGSGGAPAAFVVLEGFVPGESSTDLERPEPRPAPPADPGAAAAMGVITSRLRARESPREETRPSPAPNHGQTLEPSEKSPPSVPSVPPRHSHRVLAAEPSPGNVPEGHPRSHPPLLATAAPARRDPSPCPRAGAGQGRLEMVSNVIYEGLERPAAPAEDSGGEDGPQGEGLAQPPALSPQELTQPDDKPDSPGWPSGALPLVPQRPTGKPEVNEQPISPYSETIFGHVAPSRDLKGVGISAGQSYEAVSELDLEREVHRTSSECSSEGRSEDEETRSRLIDRIVQNDTEGYSTVEAPRAEGAPFSLPAHLYPDEVLDDLTISPYASFTSLSEPRPTMLSGWLDKLSPQGNYVFQRRYVRFDGKNLMYFSSEKEPYPKGVIPLSVIEMARSNKDNKFQVVTGHRIFVFRAENEAQRNEWCSTLQKKVMDQRLVGSRPRPANTAHCQKSGTLELKGQKSKVFAALSLPEMWLYKSEQFFKMGIGMFFIEMRGSTIREAKNRSFELITPSKTFSFVAESEREKREWMEALQEAMAEMLYDYEVAEKIWSNKANKYCADCWAQSPDWASINLCVVICKQCAGQHRSLGSNISKVQSLKLDTSVWSNEIVQLFIVLGNDRANRFWAARLPASEAIHPDSSAEQRREFISRKYREGRYRLPHPHCPTQEDVLQALCTAVAGPTLLKTILQFFSSSEAGLASDPAASEAAPGADLWWGLESKRPRNLSGSPRAREPGPEGVYNEITQPVAHSGYLHRATAPAKLPGAKKSKEDFQRTWCSLERSLLFFETEKCTEPLGHIESGDLLSLGVSRAQALTSPCPTERFRFTLELFLTGEKVQQLGTDGPETLQAWASAIGKWFTPVSCHCLLGYEFQRVGQLRYKCMLNPERWQQAFFILQKAHLFICPAEEDGAEDSINLRRLQELSLVPPTETPDKKEMLILVEMGRTFYLQGLSRVDSAAWYTDIQASAGGRGNALRDQQLSRGDIPIIVDSCIAFITQYGLRHEGIYRKNGAKSRIKVLMEEFRRDARNVKLRINDNFIEDVTDVLKRFFRELEDPIFTLELHPQWKEAAEIPSKPQRLERYKELIHRLPRLNHKTLAALIGHLYRVQKCADLNQMSTKNLSLLFAPSLFQTDGKGEHEVKVMEDLIDNYVSIFNIDEDQVSQMDLENSLITTWKDTQLSQAGDLIIEVYLEQKLPDCCVTLKVSPTMTAEELTNQVLEMRNVAASLDIWLTFEALENGELERPLHPKEKVLEQALQWCKLPEPSAAYLLVRKVPIGEGSCLFTGVKRESPKCGLLKCREEPPKLLGNKFQERYFVIRDRRLLLLKEKRSSKPEREWPLDAAKVYMGIKKKLKPPAQWGFTLTLDKQQLCLVCSGQAELWDWTTSILKAQHDDRHPVILRRRSSSDLAKQKFGTMPLVPLHGDSTDATMLSANQTLRRLHTRRTLSMFFPMKIHQDSLEEQQEKEVDADPVYEEVGNFPELAVLDLGQGLLADLSAVPPVDRSKKPAPFPEQPPATPLRSSLPASPARRVTGPSVTKAVSLERGLNLESGKAPTQGLRPTKTASLERNVEPSLALDGDWEQAVTPGSSPGAESSLELPRKRSLQPPSPINDKLIQELSSVILRKSDGQTPGSGQPVT
SIO_010081: ARAP3
subclass of: SO_0000673
so part of: ARAP3
location: join(2504304..2505376,2505931..2505992,2506303..2506376,2506809..2506873,2511057..2511332,2511774..2511843,2512292..2512412,2512587..2512774,2513591..2513697,2513804..2514003,2514136..2514221,2514392..2514574,2514793..2514955,2515258..2515389,2515462..2515615,2515763..2515865,2516069..2516267,2516353..2516416,2516713..2516876,2516986..2517198,2517364..2517469,2517997..2518144,2518289..2518357,2518649..2518723,2518846..2518960,2519122..2519250,2519431..2519564,2519709..2519791,2520001..2520036,2520472..2520535,2520648..2520785,2521121..2521159,2521824..2522390)
location: region:2504304-2522390:1
so has part: feature:2504304-2505376:1:exon
so has part: feature:2505931-2505992:1:exon
so has part: feature:2506303-2506376:1:exon
so has part: feature:2506809-2506873:1:exon
so has part: feature:2511057-2511332:1:exon
so has part: feature:2511774-2511843:1:exon
so has part: feature:2512292-2512412:1:exon
so has part: feature:2512587-2512774:1:exon
so has part: feature:2513591-2513697:1:exon
so has part: feature:2513804-2514003:1:exon
so has part: feature:2514136-2514221:1:exon
so has part: feature:2514392-2514574:1:exon
so has part: feature:2514793-2514955:1:exon
so has part: feature:2515258-2515389:1:exon
so has part: feature:2515462-2515615:1:exon
so has part: feature:2515763-2515865:1:exon
so has part: feature:2516069-2516267:1:exon
so has part: feature:2516353-2516416:1:exon
so has part: feature:2516713-2516876:1:exon
so has part: feature:2516986-2517198:1:exon
so has part: feature:2517364-2517469:1:exon
so has part: feature:2517997-2518144:1:exon
so has part: feature:2518289-2518357:1:exon
so has part: feature:2518649-2518723:1:exon
so has part: feature:2518846-2518960:1:exon
so has part: feature:2519122-2519250:1:exon
so has part: feature:2519431-2519564:1:exon
so has part: feature:2519709-2519791:1:exon
so has part: feature:2520001-2520036:1:exon
so has part: feature:2520472-2520535:1:exon
so has part: feature:2520648-2520785:1:exon
so has part: feature:2521121-2521159:1:exon
so has part: feature:2521824-2522390:1:exon

XP_032559176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2504304-2505376:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2505931-2505992:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2506303-2506376:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2506809-2506873:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2511057-2511332:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2511774-2511843:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2512292-2512412:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2512587-2512774:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2513591-2513697:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2513804-2514003:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2514136-2514221:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2514392-2514574:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2514793-2514955:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2515258-2515389:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2515462-2515615:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2515763-2515865:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2516069-2516267:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2516353-2516416:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2516713-2516876:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2516986-2517198:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2517364-2517469:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2517997-2518144:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2518289-2518357:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2518649-2518723:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2518846-2518960:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2519122-2519250:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2519431-2519564:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2519709-2519791:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2520001-2520036:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2520472-2520535:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2520648-2520785:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2521121-2521159:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2521824-2522390:1:exon

LOC116794543
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794543
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2522958..2526241)
location: region:2522958-2526241:-1
so has part: feature:2522958-2526241:-1:exon
subclass of: SO_0000010

116794543
type: Gene
SIO_000068: ncbigene

position:2522958:-1
position: 2522958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2526241:-1
position: 2526241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2522958-2526241:-1:exon

LOC116794543
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794543
product: proteinase-activated receptor 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032703286.1
SIO_010081: LOC116794543
subclass of: SO_0000673
so part of: LOC116794543
location: complement(join(2522958..2524287,2525332..2525459,2526120..2526241))
location: region:2522958-2526241:-1
so has part: feature:2526120-2526241:-1:exon
so has part: feature:2525332-2525459:-1:exon
so has part: feature:2522958-2524287:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2526120-2526241:-1:exon

position:2526120:-1
position: 2526120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2525332-2525459:-1:exon

position:2525332:-1
position: 2525332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2525459:-1
position: 2525459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2522958-2524287:-1:exon

position:2524287:-1
position: 2524287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116794543
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794543
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteinase-activated receptor 3-like
translation: MSQRVPSPGCAAACVTLLLSCAWLGSATQPSPMPGKGRSFIPLTPREKNLCPGASEEAFLNSTLSTLLLPALYSVVLLVGLPANALACWVLATNFRRCSSTLFLLNLAGADLLFVLLLPFKISYHLLGNHWLFGDYLCRTMVAFFYGNMYSSVLFLTCIGLERYISVAHPFLWKGSSWTRGKVGICVGIWLVVGAGMSPLLLHSQTQDISSLNITTCHDVLEKGTHMFFRYYFLSLVGLGFGLPFVLMTISYSCILARLLAKGRCYGQVVRVLALVLLVFILCFTPSNVLLFIHYMLEPTGCHNITYFWYALALVLSAFNNCFDPFIYFYISQDFRGWVQDARGRCLRGLESSLGRSTEKTALPLRSSEQSQGVPGCVLPSEEGSCSVVPNMKGWQ
SIO_010081: LOC116794543
subclass of: SO_0000673
so part of: LOC116794543
location: complement(join(2523194..2524287,2525332..2525428))
location: region:2523194-2525428:-1
so has part: feature:2525332-2525428:-1:exon
so has part: feature:2523194-2524287:-1:exon

XP_032559177.1
type: Protein
SIO_000068: ncbiprotein

position:2523194:-1
position: 2523194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2525428:-1
position: 2525428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2525332-2525428:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2523194-2524287:-1:exon

FCHSD1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: FCHSD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2528087..2533964
location: region:2528087-2533964:1
so has part: feature:2528087-2533964:1:exon
subclass of: SO_0000010

116794197
type: Gene
SIO_000068: ncbigene

position:2528087:1
position: 2528087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2533964:1
position: 2533964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2528087-2533964:1:exon

FCHSD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: FCHSD1
product: FCH and double SH3 domains 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032702664.1
SIO_010081: FCHSD1
subclass of: SO_0000673
so part of: FCHSD1
location: join(2528087..2528214,2528589..2528686,2529062..2529107,2529959..2530032,2530289..2530433,2530511..2530647,2530721..2530784,2530892..2531020,2531194..2531316,2531396..2531491,2531569..2531676,2531782..2531886,2532095..2532325,2532412..2532495,2532586..2532742,2532827..2533032,2533141..2533380,2533524..2533964)
location: region:2528087-2533964:1
so has part: feature:2528087-2528214:1:exon
so has part: feature:2528589-2528686:1:exon
so has part: feature:2529062-2529107:1:exon
so has part: feature:2529959-2530032:1:exon
so has part: feature:2530289-2530433:1:exon
so has part: feature:2530511-2530647:1:exon
so has part: feature:2530721-2530784:1:exon
so has part: feature:2530892-2531020:1:exon
so has part: feature:2531194-2531316:1:exon
so has part: feature:2531396-2531491:1:exon
so has part: feature:2531569-2531676:1:exon
so has part: feature:2531782-2531886:1:exon
so has part: feature:2532095-2532325:1:exon
so has part: feature:2532412-2532495:1:exon
so has part: feature:2532586-2532742:1:exon
so has part: feature:2532827-2533032:1:exon
so has part: feature:2533141-2533380:1:exon
so has part: feature:2533524-2533964:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2528087-2528214:1:exon

position:2528214:1
position: 2528214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2528589-2528686:1:exon

position:2528589:1
position: 2528589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2528686:1
position: 2528686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2529062-2529107:1:exon

position:2529062:1
position: 2529062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2529107:1
position: 2529107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2529959-2530032:1:exon

position:2529959:1
position: 2529959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2530032:1
position: 2530032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2530289-2530433:1:exon

position:2530289:1
position: 2530289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2530433:1
position: 2530433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2530511-2530647:1:exon

position:2530511:1
position: 2530511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2530647:1
position: 2530647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2530721-2530784:1:exon

position:2530721:1
position: 2530721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2530784:1
position: 2530784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2530892-2531020:1:exon

position:2530892:1
position: 2530892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2531020:1
position: 2531020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2531194-2531316:1:exon

position:2531194:1
position: 2531194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2531316:1
position: 2531316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2531396-2531491:1:exon

position:2531396:1
position: 2531396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2531491:1
position: 2531491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2531569-2531676:1:exon

position:2531569:1
position: 2531569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2531676:1
position: 2531676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2531782-2531886:1:exon

position:2531782:1
position: 2531782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2531886:1
position: 2531886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2532095-2532325:1:exon

position:2532095:1
position: 2532095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2532325:1
position: 2532325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2532412-2532495:1:exon

position:2532412:1
position: 2532412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2532495:1
position: 2532495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2532586-2532742:1:exon

position:2532586:1
position: 2532586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2532742:1
position: 2532742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2532827-2533032:1:exon

position:2532827:1
position: 2532827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2533032:1
position: 2533032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2533141-2533380:1:exon

position:2533141:1
position: 2533141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2533380:1
position: 2533380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2533524-2533964:1:exon

position:2533524:1
position: 2533524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FCHSD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: FCHSD1
product: FCH and double SH3 domains 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032702665.1
SIO_010081: FCHSD1
subclass of: SO_0000673
so part of: FCHSD1
location: join(2528087..2528214,2528589..2528686,2529062..2529107,2529959..2530032,2530289..2530433,2530511..2530647,2530721..2530784,2530892..2531020,2531194..2531316,2531396..2531491,2531569..2531676,2531782..2531886,2532095..2532325,2532412..2532495,2532586..2532742,2532827..2533032,2533141..2533237,2533313..2533380,2533524..2533964)
location: region:2528087-2533964:1
so has part: feature:2528087-2528214:1:exon
so has part: feature:2528589-2528686:1:exon
so has part: feature:2529062-2529107:1:exon
so has part: feature:2529959-2530032:1:exon
so has part: feature:2530289-2530433:1:exon
so has part: feature:2530511-2530647:1:exon
so has part: feature:2530721-2530784:1:exon
so has part: feature:2530892-2531020:1:exon
so has part: feature:2531194-2531316:1:exon
so has part: feature:2531396-2531491:1:exon
so has part: feature:2531569-2531676:1:exon
so has part: feature:2531782-2531886:1:exon
so has part: feature:2532095-2532325:1:exon
so has part: feature:2532412-2532495:1:exon
so has part: feature:2532586-2532742:1:exon
so has part: feature:2532827-2533032:1:exon
so has part: feature:2533141-2533237:1:exon
so has part: feature:2533313-2533380:1:exon
so has part: feature:2533524-2533964:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2528087-2528214:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2528589-2528686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2529062-2529107:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2529959-2530032:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2530289-2530433:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2530511-2530647:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2530721-2530784:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2530892-2531020:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2531194-2531316:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2531396-2531491:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2531569-2531676:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2531782-2531886:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2532095-2532325:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2532412-2532495:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2532586-2532742:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2532827-2533032:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2533141-2533237:1:exon

position:2533237:1
position: 2533237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2533313-2533380:1:exon

position:2533313:1
position: 2533313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2533524-2533964:1:exon

FCHSD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: FCHSD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-BAR and double SH3 domains protein 1 isoform X1
translation: MQPPPRKVKLTQELRVHVLEQLSGLQSKQQRDAELLEDIRSYSKQRAAIDREYGQALQRLASQFVKRDWQRGRGEAGDSRSVAAVWKGVIEGTAHAGQVRVTASESYRALAAEAARTARLSKERMLKKGMERLQKVQAELLESVKELDKAKKQFTHLQRSSEVARDKAADVEARLRKSDRRIFHTKASLQKLSAKFSARLAEHSRQLAGVQNEYSFALVSATAHLEHYQRVELPAAMQALDGDLYERLREHLSAASRTEVETCRATRDWFQGVAEASARVCREQDLLLFLQDHPAFSLAPEQRFQLAEVEEVCLLPPGDDGASLEKEARRWATRVTRDCKNKAHSEEVLQRLEARRQQVSEGEAATVERQMEEARENIRKAEVSRVKAEARLALLRAAGLDVDAWLAGAMVGTGEETPTGLDPAEFDDYEDSDEPDGDDEPGPAARTYPYTCRVIFGYQGCQADELSITQGEELEVIEDGDAEEWVKARNKAGQVGYVPEKYLLSLGCESGAGLGPPGPSALHRQLSSIMAAELVLEPGAWLVRALYDYEGQSPEELSFPEGAIIRVLPRAAGEVDDGFWTGDFDGRVGVFPSLVVEELTGAREAAGQELPSPSPPPFSPPGLAPGAMLTPSPAPETSLGGECWGGELERAGRAWKARLSCWALPGCRQDGTGSGQSSPDLAATRLRPLRAPPPPPGRVPEPDPELHFS
SIO_010081: FCHSD1
subclass of: SO_0000673
so part of: FCHSD1
location: join(2528194..2528214,2528589..2528686,2529062..2529107,2529959..2530032,2530289..2530433,2530511..2530647,2530721..2530784,2530892..2531020,2531194..2531316,2531396..2531491,2531569..2531676,2531782..2531886,2532095..2532325,2532412..2532495,2532586..2532742,2532827..2533032,2533141..2533380,2533524..2533589)
location: region:2528194-2533589:1
so has part: feature:2528194-2528214:1:exon
so has part: feature:2528589-2528686:1:exon
so has part: feature:2529062-2529107:1:exon
so has part: feature:2529959-2530032:1:exon
so has part: feature:2530289-2530433:1:exon
so has part: feature:2530511-2530647:1:exon
so has part: feature:2530721-2530784:1:exon
so has part: feature:2530892-2531020:1:exon
so has part: feature:2531194-2531316:1:exon
so has part: feature:2531396-2531491:1:exon
so has part: feature:2531569-2531676:1:exon
so has part: feature:2531782-2531886:1:exon
so has part: feature:2532095-2532325:1:exon
so has part: feature:2532412-2532495:1:exon
so has part: feature:2532586-2532742:1:exon
so has part: feature:2532827-2533032:1:exon
so has part: feature:2533141-2533380:1:exon
so has part: feature:2533524-2533589:1:exon

XP_032558555.1
type: Protein
SIO_000068: ncbiprotein

position:2528194:1
position: 2528194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2533589:1
position: 2533589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2528194-2528214:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2528589-2528686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2529062-2529107:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2529959-2530032:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2530289-2530433:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2530511-2530647:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2530721-2530784:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2530892-2531020:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2531194-2531316:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2531396-2531491:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2531569-2531676:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2531782-2531886:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2532095-2532325:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2532412-2532495:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2532586-2532742:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2532827-2533032:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2533141-2533380:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2533524-2533589:1:exon

FCHSD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: FCHSD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-BAR and double SH3 domains protein 1 isoform X2
translation: MQPPPRKVKLTQELRVHVLEQLSGLQSKQQRDAELLEDIRSYSKQRAAIDREYGQALQRLASQFVKRDWQRGRGEAGDSRSVAAVWKGVIEGTAHAGQVRVTASESYRALAAEAARTARLSKERMLKKGMERLQKVQAELLESVKELDKAKKQFTHLQRSSEVARDKAADVEARLRKSDRRIFHTKASLQKLSAKFSARLAEHSRQLAGVQNEYSFALVSATAHLEHYQRVELPAAMQALDGDLYERLREHLSAASRTEVETCRATRDWFQGVAEASARVCREQDLLLFLQDHPAFSLAPEQRFQLAEVEEVCLLPPGDDGASLEKEARRWATRVTRDCKNKAHSEEVLQRLEARRQQVSEGEAATVERQMEEARENIRKAEVSRVKAEARLALLRAAGLDVDAWLAGAMVGTGEETPTGLDPAEFDDYEDSDEPDGDDEPGPAARTYPYTCRVIFGYQGCQADELSITQGEELEVIEDGDAEEWVKARNKAGQVGYVPEKYLLSLGCESGAGLGPPGPSALHRQLSSIMAAELVLEPGAWLVRALYDYEGQSPEELSFPEGAIIRVLPRAAGEVDDGFWTGDFDGRVGVFPSLVVEELTGAREAAGQELPSPSPPPFSPPGLAPGAMLTPSPAPETSLGGCRQDGTGSGQSSPDLAATRLRPLRAPPPPPGRVPEPDPELHFS
SIO_010081: FCHSD1
subclass of: SO_0000673
so part of: FCHSD1
location: join(2528194..2528214,2528589..2528686,2529062..2529107,2529959..2530032,2530289..2530433,2530511..2530647,2530721..2530784,2530892..2531020,2531194..2531316,2531396..2531491,2531569..2531676,2531782..2531886,2532095..2532325,2532412..2532495,2532586..2532742,2532827..2533032,2533141..2533237,2533313..2533380,2533524..2533589)
location: region:2528194-2533589:1
so has part: feature:2528194-2528214:1:exon
so has part: feature:2528589-2528686:1:exon
so has part: feature:2529062-2529107:1:exon
so has part: feature:2529959-2530032:1:exon
so has part: feature:2530289-2530433:1:exon
so has part: feature:2530511-2530647:1:exon
so has part: feature:2530721-2530784:1:exon
so has part: feature:2530892-2531020:1:exon
so has part: feature:2531194-2531316:1:exon
so has part: feature:2531396-2531491:1:exon
so has part: feature:2531569-2531676:1:exon
so has part: feature:2531782-2531886:1:exon
so has part: feature:2532095-2532325:1:exon
so has part: feature:2532412-2532495:1:exon
so has part: feature:2532586-2532742:1:exon
so has part: feature:2532827-2533032:1:exon
so has part: feature:2533141-2533237:1:exon
so has part: feature:2533313-2533380:1:exon
so has part: feature:2533524-2533589:1:exon

XP_032558556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2528194-2528214:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2528589-2528686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2529062-2529107:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2529959-2530032:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2530289-2530433:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2530511-2530647:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2530721-2530784:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2530892-2531020:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2531194-2531316:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2531396-2531491:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2531569-2531676:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2531782-2531886:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2532095-2532325:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2532412-2532495:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2532586-2532742:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2532827-2533032:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2533141-2533237:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2533313-2533380:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2533524-2533589:1:exon

RELL2
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: RELL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2533966..2549775)
location: region:2533966-2549775:-1
so has part: feature:2533966-2549775:-1:exon
subclass of: SO_0000010

116794198
type: Gene
SIO_000068: ncbigene

position:2533966:-1
position: 2533966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2549775:-1
position: 2549775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2533966-2549775:-1:exon

RELL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: RELL2
product: RELT like 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032702668.1
SIO_010081: RELL2
subclass of: SO_0000673
so part of: RELL2
location: complement(join(2533966..2534666,2534959..2535001,2536577..2537135,2541546..2541728,2542048..2542111,2542189..2542254,2543854..2544067,2549651..2549775))
location: region:2533966-2549775:-1
so has part: feature:2549651-2549775:-1:exon
so has part: feature:2543854-2544067:-1:exon
so has part: feature:2542189-2542254:-1:exon
so has part: feature:2542048-2542111:-1:exon
so has part: feature:2541546-2541728:-1:exon
so has part: feature:2536577-2537135:-1:exon
so has part: feature:2534959-2535001:-1:exon
so has part: feature:2533966-2534666:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2549651-2549775:-1:exon

position:2549651:-1
position: 2549651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2543854-2544067:-1:exon

position:2543854:-1
position: 2543854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2544067:-1
position: 2544067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2542189-2542254:-1:exon

position:2542189:-1
position: 2542189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2542254:-1
position: 2542254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2542048-2542111:-1:exon

position:2542048:-1
position: 2542048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2542111:-1
position: 2542111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2541546-2541728:-1:exon

position:2541546:-1
position: 2541546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2541728:-1
position: 2541728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2536577-2537135:-1:exon

position:2536577:-1
position: 2536577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2537135:-1
position: 2537135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2534959-2535001:-1:exon

position:2534959:-1
position: 2534959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2535001:-1
position: 2535001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2533966-2534666:-1:exon

position:2534666:-1
position: 2534666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RELL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: RELL2
product: RELT like 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032702666.1
SIO_010081: RELL2
subclass of: SO_0000673
so part of: RELL2
location: complement(join(2533966..2534666,2534959..2535001,2536577..2537135,2541546..2541728,2542048..2542111,2542189..2542254,2543854..2544067,2548328..2548456,2549651..2549775))
location: region:2533966-2549775:-1
so has part: feature:2549651-2549775:-1:exon
so has part: feature:2548328-2548456:-1:exon
so has part: feature:2543854-2544067:-1:exon
so has part: feature:2542189-2542254:-1:exon
so has part: feature:2542048-2542111:-1:exon
so has part: feature:2541546-2541728:-1:exon
so has part: feature:2536577-2537135:-1:exon
so has part: feature:2534959-2535001:-1:exon
so has part: feature:2533966-2534666:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2549651-2549775:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2548328-2548456:-1:exon

position:2548328:-1
position: 2548328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2548456:-1
position: 2548456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2543854-2544067:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2542189-2542254:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2542048-2542111:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2541546-2541728:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2536577-2537135:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2534959-2535001:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2533966-2534666:-1:exon

RELL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: RELL2
product: RELT like 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032702669.1
SIO_010081: RELL2
subclass of: SO_0000673
so part of: RELL2
location: complement(join(2533966..2534666,2534959..2535001,2536577..2537135,2541546..2541728,2542048..2542111,2542189..2542254,2543854..2544067,2544745..2545049,2549651..2549725))
location: region:2533966-2549725:-1
so has part: feature:2549651-2549725:-1:exon
so has part: feature:2544745-2545049:-1:exon
so has part: feature:2543854-2544067:-1:exon
so has part: feature:2542189-2542254:-1:exon
so has part: feature:2542048-2542111:-1:exon
so has part: feature:2541546-2541728:-1:exon
so has part: feature:2536577-2537135:-1:exon
so has part: feature:2534959-2535001:-1:exon
so has part: feature:2533966-2534666:-1:exon

position:2549725:-1
position: 2549725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2549651-2549725:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2544745-2545049:-1:exon

position:2544745:-1
position: 2544745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2545049:-1
position: 2545049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2543854-2544067:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2542189-2542254:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2542048-2542111:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2541546-2541728:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2536577-2537135:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2534959-2535001:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2533966-2534666:-1:exon

RELL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: RELL2
product: RELT like 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032702667.1
SIO_010081: RELL2
subclass of: SO_0000673
so part of: RELL2
location: complement(join(2533966..2534666,2534959..2535001,2536577..2537135,2541546..2541728,2542048..2542111,2542189..2542254,2543854..2544067,2547196..2548132))
location: region:2533966-2548132:-1
so has part: feature:2547196-2548132:-1:exon
so has part: feature:2543854-2544067:-1:exon
so has part: feature:2542189-2542254:-1:exon
so has part: feature:2542048-2542111:-1:exon
so has part: feature:2541546-2541728:-1:exon
so has part: feature:2536577-2537135:-1:exon
so has part: feature:2534959-2535001:-1:exon
so has part: feature:2533966-2534666:-1:exon

position:2548132:-1
position: 2548132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2547196-2548132:-1:exon

position:2547196:-1
position: 2547196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2543854-2544067:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2542189-2542254:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2542048-2542111:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2541546-2541728:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2536577-2537135:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2534959-2535001:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2533966-2534666:-1:exon

RELL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: RELL2
product: RELT like 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032702670.1
SIO_010081: RELL2
subclass of: SO_0000673
so part of: RELL2
location: complement(join(2533966..2534666,2534959..2535001,2536577..2537135,2541546..2541728,2542048..2542111,2542189..2542254,2543854..2544067,2544493..2544691))
location: region:2533966-2544691:-1
so has part: feature:2544493-2544691:-1:exon
so has part: feature:2543854-2544067:-1:exon
so has part: feature:2542189-2542254:-1:exon
so has part: feature:2542048-2542111:-1:exon
so has part: feature:2541546-2541728:-1:exon
so has part: feature:2536577-2537135:-1:exon
so has part: feature:2534959-2535001:-1:exon
so has part: feature:2533966-2534666:-1:exon

position:2544691:-1
position: 2544691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2544493-2544691:-1:exon

position:2544493:-1
position: 2544493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2543854-2544067:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2542189-2542254:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2542048-2542111:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2541546-2541728:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2536577-2537135:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2534959-2535001:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2533966-2534666:-1:exon

RELL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: RELL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RELT-like protein 2 isoform X3
translation: MGCPAPGTEPRGDQRGGETKRPHPPGRAGTRGHRGTGQIRMSDQNSTDDGESDPQHSLSMVFLLVLVFFIMGLVGFLICHVLKKKGYRCRTFRDDLDPDNKDVLAELQDNEEEELNEDTVEKIVRCIIQNEANAEALKEMLGENEGDVPVPVSLCPHSQDGGPPHHHTVHLGSTQAPCIHCSRRKRPPLQRQGRSKEGKGRMHPGETTVFSVGRFRVTHIGKKPAVQEQQDGPLPDGSRELSTEELEHSSDRLQRERALNGTVPTGELQNGDIQSGKGVEQSLSTTPAPNTPASSGTRDSRRAGTGSGRAGSPQDAGTAPGSLSRQRRLLSHPALGGSSPSIPGELAREGAGMCLEEVGLGSADEVSDIHGSLSLHEQAEELGRDDSSRRQPGVEDQEQQEPSAPEKDWKSTV
SIO_010081: RELL2
subclass of: SO_0000673
so part of: RELL2
location: complement(join(2534960..2535001,2536577..2537135,2541546..2541728,2542048..2542111,2542189..2542254,2543854..2544067,2549651..2549764))
location: region:2534960-2549764:-1
so has part: feature:2549651-2549764:-1:exon
so has part: feature:2543854-2544067:-1:exon
so has part: feature:2542189-2542254:-1:exon
so has part: feature:2542048-2542111:-1:exon
so has part: feature:2541546-2541728:-1:exon
so has part: feature:2536577-2537135:-1:exon
so has part: feature:2534960-2535001:-1:exon

XP_032558559.1
type: Protein
SIO_000068: ncbiprotein

position:2534960:-1
position: 2534960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2549764:-1
position: 2549764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2549651-2549764:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2543854-2544067:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2542189-2542254:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2542048-2542111:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2541546-2541728:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2536577-2537135:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2534960-2535001:-1:exon

RELL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: RELL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RELT-like protein 2 isoform X1
translation: MGCPAPGTEPRGDQRGGETKRPHPPGRAGTRGHRGTGQHPARPTGVSERSRTPKGHPKSWLGMETVADGHWDVPWLLRGSRIRMSDQNSTDDGESDPQHSLSMVFLLVLVFFIMGLVGFLICHVLKKKGYRCRTFRDDLDPDNKDVLAELQDNEEEELNEDTVEKIVRCIIQNEANAEALKEMLGENEGDVPVPVSLCPHSQDGGPPHHHTVHLGSTQAPCIHCSRRKRPPLQRQGRSKEGKGRMHPGETTVFSVGRFRVTHIGKKPAVQEQQDGPLPDGSRELSTEELEHSSDRLQRERALNGTVPTGELQNGDIQSGKGVEQSLSTTPAPNTPASSGTRDSRRAGTGSGRAGSPQDAGTAPGSLSRQRRLLSHPALGGSSPSIPGELAREGAGMCLEEVGLGSADEVSDIHGSLSLHEQAEELGRDDSSRRQPGVEDQEQQEPSAPEKDWKSTV
SIO_010081: RELL2
subclass of: SO_0000673
so part of: RELL2
location: complement(join(2534960..2535001,2536577..2537135,2541546..2541728,2542048..2542111,2542189..2542254,2543854..2544067,2548328..2548456,2549651..2549764))
location: region:2534960-2549764:-1
so has part: feature:2549651-2549764:-1:exon
so has part: feature:2548328-2548456:-1:exon
so has part: feature:2543854-2544067:-1:exon
so has part: feature:2542189-2542254:-1:exon
so has part: feature:2542048-2542111:-1:exon
so has part: feature:2541546-2541728:-1:exon
so has part: feature:2536577-2537135:-1:exon
so has part: feature:2534960-2535001:-1:exon

XP_032558557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2549651-2549764:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2548328-2548456:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2543854-2544067:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2542189-2542254:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2542048-2542111:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2541546-2541728:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2536577-2537135:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2534960-2535001:-1:exon

RELL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: RELL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RELT-like protein 2 isoform X2
translation: MEQLCRHDGDFWAEHRSEDPRRSLPVGFQDPGNPACLAATWTVSGAEVAHPLSGCIPTVCGVTLAPMAVEEMWEESGREIRMSDQNSTDDGESDPQHSLSMVFLLVLVFFIMGLVGFLICHVLKKKGYRCRTFRDDLDPDNKDVLAELQDNEEEELNEDTVEKIVRCIIQNEANAEALKEMLGENEGDVPVPVSLCPHSQDGGPPHHHTVHLGSTQAPCIHCSRRKRPPLQRQGRSKEGKGRMHPGETTVFSVGRFRVTHIGKKPAVQEQQDGPLPDGSRELSTEELEHSSDRLQRERALNGTVPTGELQNGDIQSGKGVEQSLSTTPAPNTPASSGTRDSRRAGTGSGRAGSPQDAGTAPGSLSRQRRLLSHPALGGSSPSIPGELAREGAGMCLEEVGLGSADEVSDIHGSLSLHEQAEELGRDDSSRRQPGVEDQEQQEPSAPEKDWKSTV
SIO_010081: RELL2
subclass of: SO_0000673
so part of: RELL2
location: complement(join(2534960..2535001,2536577..2537135,2541546..2541728,2542048..2542111,2542189..2542254,2543854..2544067,2547196..2547432))
location: region:2534960-2547432:-1
so has part: feature:2547196-2547432:-1:exon
so has part: feature:2543854-2544067:-1:exon
so has part: feature:2542189-2542254:-1:exon
so has part: feature:2542048-2542111:-1:exon
so has part: feature:2541546-2541728:-1:exon
so has part: feature:2536577-2537135:-1:exon
so has part: feature:2534960-2535001:-1:exon

XP_032558558.1
type: Protein
SIO_000068: ncbiprotein

position:2547432:-1
position: 2547432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2547196-2547432:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2543854-2544067:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2542189-2542254:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2542048-2542111:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2541546-2541728:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2536577-2537135:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2534960-2535001:-1:exon

RELL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: RELL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RELT-like protein 2 isoform X4
translation: MSDQNSTDDGESDPQHSLSMVFLLVLVFFIMGLVGFLICHVLKKKGYRCRTFRDDLDPDNKDVLAELQDNEEEELNEDTVEKIVRCIIQNEANAEALKEMLGENEGDVPVPVSLCPHSQDGGPPHHHTVHLGSTQAPCIHCSRRKRPPLQRQGRSKEGKGRMHPGETTVFSVGRFRVTHIGKKPAVQEQQDGPLPDGSRELSTEELEHSSDRLQRERALNGTVPTGELQNGDIQSGKGVEQSLSTTPAPNTPASSGTRDSRRAGTGSGRAGSPQDAGTAPGSLSRQRRLLSHPALGGSSPSIPGELAREGAGMCLEEVGLGSADEVSDIHGSLSLHEQAEELGRDDSSRRQPGVEDQEQQEPSAPEKDWKSTV
SIO_010081: RELL2
subclass of: SO_0000673
so part of: RELL2
location: complement(join(2534960..2535001,2536577..2537135,2541546..2541728,2542048..2542111,2542189..2542254,2543854..2544061))
location: region:2534960-2544061:-1
so has part: feature:2543854-2544061:-1:exon
so has part: feature:2542189-2542254:-1:exon
so has part: feature:2542048-2542111:-1:exon
so has part: feature:2541546-2541728:-1:exon
so has part: feature:2536577-2537135:-1:exon
so has part: feature:2534960-2535001:-1:exon

XP_032558560.1
type: Protein
SIO_000068: ncbiprotein

position:2544061:-1
position: 2544061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2543854-2544061:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2542189-2542254:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2542048-2542111:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2541546-2541728:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2536577-2537135:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2534960-2535001:-1:exon

RELL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: RELL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RELT-like protein 2 isoform X4
translation: MSDQNSTDDGESDPQHSLSMVFLLVLVFFIMGLVGFLICHVLKKKGYRCRTFRDDLDPDNKDVLAELQDNEEEELNEDTVEKIVRCIIQNEANAEALKEMLGENEGDVPVPVSLCPHSQDGGPPHHHTVHLGSTQAPCIHCSRRKRPPLQRQGRSKEGKGRMHPGETTVFSVGRFRVTHIGKKPAVQEQQDGPLPDGSRELSTEELEHSSDRLQRERALNGTVPTGELQNGDIQSGKGVEQSLSTTPAPNTPASSGTRDSRRAGTGSGRAGSPQDAGTAPGSLSRQRRLLSHPALGGSSPSIPGELAREGAGMCLEEVGLGSADEVSDIHGSLSLHEQAEELGRDDSSRRQPGVEDQEQQEPSAPEKDWKSTV
SIO_010081: RELL2
subclass of: SO_0000673
so part of: RELL2
location: complement(join(2534960..2535001,2536577..2537135,2541546..2541728,2542048..2542111,2542189..2542254,2543854..2544061))
location: region:2534960-2544061:-1
so has part: feature:2543854-2544061:-1:exon
so has part: feature:2542189-2542254:-1:exon
so has part: feature:2542048-2542111:-1:exon
so has part: feature:2541546-2541728:-1:exon
so has part: feature:2536577-2537135:-1:exon
so has part: feature:2534960-2535001:-1:exon

XP_032558561.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2543854-2544061:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2542189-2542254:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2542048-2542111:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2541546-2541728:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2536577-2537135:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2534960-2535001:-1:exon

HDAC3
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: HDAC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2549326..2563846
location: region:2549326-2563846:1
so has part: feature:2549326-2563846:1:exon
subclass of: SO_0000010

116794199
type: Gene
SIO_000068: ncbigene

position:2549326:1
position: 2549326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2563846:1
position: 2563846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2549326-2563846:1:exon

HDAC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: HDAC3
product: histone deacetylase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 6 ESTs, 6 long SRA reads, 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_032702672.1
SIO_010081: HDAC3
subclass of: SO_0000673
so part of: HDAC3
location: join(2549326..2549457,2549749..2549831,2555286..2555428,2556611..2556692,2556846..2556902,2556998..2557053,2558948..2559081,2559329..2559409,2559496..2559569,2559721..2559785,2560529..2560618,2560735..2560793,2561420..2561499,2561851..2562008,2562678..2563846)
location: region:2549326-2563846:1
so has part: feature:2549326-2549457:1:exon
so has part: feature:2549749-2549831:1:exon
so has part: feature:2555286-2555428:1:exon
so has part: feature:2556611-2556692:1:exon
so has part: feature:2556846-2556902:1:exon
so has part: feature:2556998-2557053:1:exon
so has part: feature:2558948-2559081:1:exon
so has part: feature:2559329-2559409:1:exon
so has part: feature:2559496-2559569:1:exon
so has part: feature:2559721-2559785:1:exon
so has part: feature:2560529-2560618:1:exon
so has part: feature:2560735-2560793:1:exon
so has part: feature:2561420-2561499:1:exon
so has part: feature:2561851-2562008:1:exon
so has part: feature:2562678-2563846:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2549326-2549457:1:exon

position:2549457:1
position: 2549457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2549749-2549831:1:exon

position:2549749:1
position: 2549749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2549831:1
position: 2549831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2555286-2555428:1:exon

position:2555286:1
position: 2555286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2555428:1
position: 2555428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2556611-2556692:1:exon

position:2556611:1
position: 2556611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2556692:1
position: 2556692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2556846-2556902:1:exon

position:2556846:1
position: 2556846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2556902:1
position: 2556902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2556998-2557053:1:exon

position:2556998:1
position: 2556998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2557053:1
position: 2557053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2558948-2559081:1:exon

position:2558948:1
position: 2558948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2559081:1
position: 2559081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2559329-2559409:1:exon

position:2559329:1
position: 2559329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2559409:1
position: 2559409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2559496-2559569:1:exon

position:2559496:1
position: 2559496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2559569:1
position: 2559569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2559721-2559785:1:exon

position:2559721:1
position: 2559721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2559785:1
position: 2559785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2560529-2560618:1:exon

position:2560529:1
position: 2560529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2560618:1
position: 2560618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2560735-2560793:1:exon

position:2560735:1
position: 2560735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2560793:1
position: 2560793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2561420-2561499:1:exon

position:2561420:1
position: 2561420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2561499:1
position: 2561499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2561851-2562008:1:exon

position:2561851:1
position: 2561851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2562008:1
position: 2562008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2562678-2563846:1:exon

position:2562678:1
position: 2562678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HDAC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: HDAC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 3
translation: MAKTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDYYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVDEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPSDLLSYDRTDEPDPEERGSEENYSRPEAANEFYDGDHDNDKESDVEI
SIO_010081: HDAC3
subclass of: SO_0000673
so part of: HDAC3
location: join(2549403..2549457,2549749..2549831,2555286..2555428,2556611..2556692,2556846..2556902,2556998..2557053,2558948..2559081,2559329..2559409,2559496..2559569,2559721..2559785,2560529..2560618,2560735..2560793,2561420..2561499,2561851..2562008,2562678..2562747)
location: region:2549403-2562747:1
so has part: feature:2549403-2549457:1:exon
so has part: feature:2549749-2549831:1:exon
so has part: feature:2555286-2555428:1:exon
so has part: feature:2556611-2556692:1:exon
so has part: feature:2556846-2556902:1:exon
so has part: feature:2556998-2557053:1:exon
so has part: feature:2558948-2559081:1:exon
so has part: feature:2559329-2559409:1:exon
so has part: feature:2559496-2559569:1:exon
so has part: feature:2559721-2559785:1:exon
so has part: feature:2560529-2560618:1:exon
so has part: feature:2560735-2560793:1:exon
so has part: feature:2561420-2561499:1:exon
so has part: feature:2561851-2562008:1:exon
so has part: feature:2562678-2562747:1:exon

XP_032558563.1
type: Protein
SIO_000068: ncbiprotein

position:2549403:1
position: 2549403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2562747:1
position: 2562747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2549403-2549457:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2549749-2549831:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2555286-2555428:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2556611-2556692:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2556846-2556902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2556998-2557053:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2558948-2559081:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2559329-2559409:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2559496-2559569:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2559721-2559785:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2560529-2560618:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2560735-2560793:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2561420-2561499:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2561851-2562008:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2562678-2562747:1:exon

LOC116794200
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794200
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2573365..2581280
location: region:2573365-2581280:1
so has part: feature:2573365-2581280:1:exon
subclass of: SO_0000011

116794200
type: Gene
SIO_000068: ncbigene

position:2573365:1
position: 2573365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2581280:1
position: 2581280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2573365-2581280:1:exon

LOC116794200
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116794200
product: uncharacterized LOC116794200, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004359720.1
SIO_010081: LOC116794200
subclass of: SO_0000673
so part of: LOC116794200
location: join(2573365..2573433,2578079..2578186,2579591..2579736,2581154..2581280)
location: region:2573365-2581280:1
so has part: feature:2573365-2573433:1:exon
so has part: feature:2578079-2578186:1:exon
so has part: feature:2579591-2579736:1:exon
so has part: feature:2581154-2581280:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2573365-2573433:1:exon

position:2573433:1
position: 2573433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2578079-2578186:1:exon

position:2578079:1
position: 2578079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2578186:1
position: 2578186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2579591-2579736:1:exon

position:2579591:1
position: 2579591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2579736:1
position: 2579736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2581154-2581280:1:exon

position:2581154:1
position: 2581154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116794200
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116794200
product: uncharacterized LOC116794200, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_004359719.1
SIO_010081: LOC116794200
subclass of: SO_0000673
so part of: LOC116794200
location: join(2576170..2578186,2579591..2579736,2581154..2581280)
location: region:2576170-2581280:1
so has part: feature:2576170-2578186:1:exon
so has part: feature:2579591-2579736:1:exon
so has part: feature:2581154-2581280:1:exon

position:2576170:1
position: 2576170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2576170-2578186:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2579591-2579736:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2581154-2581280:1:exon

LOC116794201
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794201
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2582178..2596236
location: region:2582178-2596236:1
so has part: feature:2582178-2596236:1:exon
subclass of: SO_0000011

116794201
type: Gene
SIO_000068: ncbigene

position:2582178:1
position: 2582178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2596236:1
position: 2596236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2582178-2596236:1:exon

LOC116794201
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116794201
product: uncharacterized LOC116794201
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004359721.1
SIO_010081: LOC116794201
subclass of: SO_0000673
so part of: LOC116794201
location: join(2582178..2582331,2582741..2582885,2594228..2596236)
location: region:2582178-2596236:1
so has part: feature:2582178-2582331:1:exon
so has part: feature:2582741-2582885:1:exon
so has part: feature:2594228-2596236:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2582178-2582331:1:exon

position:2582331:1
position: 2582331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2582741-2582885:1:exon

position:2582741:1
position: 2582741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2582885:1
position: 2582885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2594228-2596236:1:exon

position:2594228:1
position: 2594228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116794575
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794575
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2603364..2691394)
location: region:2603364-2691394:-1
so has part: feature:2603364-2691394:-1:exon
subclass of: SO_0000010

116794575
type: Gene
SIO_000068: ncbigene

position:2603364:-1
position: 2603364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2691394:-1
position: 2691394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2603364-2691394:-1:exon

LOC116794575
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794575
product: uncharacterized LOC116794575
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 11 long SRA reads, 380 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032703347.1
SIO_010081: LOC116794575
subclass of: SO_0000673
so part of: LOC116794575
location: complement(join(2603364..2605897,2610060..2610148,2623129..2623187,2674520..2677382,2678586..2681397,2684041..2684182,2687822..2691394))
location: region:2603364-2691394:-1
so has part: feature:2687822-2691394:-1:exon
so has part: feature:2684041-2684182:-1:exon
so has part: feature:2678586-2681397:-1:exon
so has part: feature:2674520-2677382:-1:exon
so has part: feature:2623129-2623187:-1:exon
so has part: feature:2610060-2610148:-1:exon
so has part: feature:2603364-2605897:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2687822-2691394:-1:exon

position:2687822:-1
position: 2687822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2684041-2684182:-1:exon

position:2684041:-1
position: 2684041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2684182:-1
position: 2684182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2678586-2681397:-1:exon

position:2678586:-1
position: 2678586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2681397:-1
position: 2681397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2674520-2677382:-1:exon

position:2674520:-1
position: 2674520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2677382:-1
position: 2677382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2623129-2623187:-1:exon

position:2623129:-1
position: 2623129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2623187:-1
position: 2623187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2610060-2610148:-1:exon

position:2610060:-1
position: 2610060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2610148:-1
position: 2610148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2603364-2605897:-1:exon

position:2605897:-1
position: 2605897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116794575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794575
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(2677061..2677063),aa:OTHER)
product: LOW QUALITY PROTEIN: uncharacterized protein LOC116794575
translation: MGAKTQGGHCSLALGACSAGRRLRVPLLTERSERKVGALQPRPLRPGSIAGSLDSWIGKRSVSDRPGGADPRYSEAEWRAAPPGSSKSEPEREPDQGSAAGICRRCCGAGGAAAEMCAAGRRWGRRQRVLLWGVLLAAWEAAWGQLRYSVPEEMPKGSFVGDVANDLGLQLPALLDSGVRIIDRGRTQYFALHGKTGHLVTAQRIDREKVCESVEQCVLRCELIVEGEMKVYEIEVEIMDINDNAPSFKEIELEESISEMTVLGSRFPLPDAQDPDSGRNSLQSYELSGDEHFSLAVQTGPGGDQRPELVLAKALDREEAAFHELVLRASDGGEPSRTGTARIRVTVLDANDNAPVFSQAEYTVRVPEDVPVGSTLVTVTATDADEGLNGHVKYSFHRISDRTSKVFHLESKTGEITLKNYLDFEEMSSHELEVQARDGGGLFHTARVTITVTDVNDNVPELTISSALTEISEDAHSGTVVALLHVQDQDSGANGEVRCSLDTGVPFRLESSQGSYYRVVTARELDREQEWEYNVTVRAADGGRPSLQSSRVLCLRVLDVNDNAPVFLQERYSARLRENNVAGALVLRVRATDSDWGENARVRYRLGEGGVRGSALSSYVSVQAETGALYALRSFDYEQVREVGLWVWAEDGGSPALSSNVSVRLVIVDENDNAPQVLYPPAAAAAASGSGWAGVELAARSSEAGALVAKVVAVDADAGQNAWLSYELAKATEPGLFRVGLHSGEVRTARSPLARDAARQSLVVLVKDHGRPALSATATLSVVLADSVAELLAELGSAARAEAEAGAAEAGGSLTRWLVLAVAAVSCLFVAFLLLLLALRLRRWRRSQQQLLAAASGALRGVPATHFVGIDGVRAFLHSYSHDVSLTDDSRKSHLRFSTDSCCHTLPARPPPDEPAPLLGDQEPAGAQQADPAPLPVSSSDQTVSAKLPLVVCCSFPAVLCSLCTEVSKTSFSHLGHNSVCEEYEEKAKRESVVISLKVELEKVAHDEVLDVCWSPSRAQSWSPLVAGVRRLQCCVGASGCRCWPPASVAGAAAAAGGASCPRRLLARPGSAGQSGSGPGSRGERRRGAGSRGVRVGGGGGLGALCRALCRARGAAAREAGERQEPGELGERAPWAMSGGRRASGGPGGGRALVLGAVLLGLCWRAAAERLRYSMAEELPRGSLVGPLARDLGLSAHELPARKLRLSADKQYFTVSEGNGNLYVSERLDREELCGESLSCSVSFEALVHNPLNVFHVEVSIEDVNDNSPTFNKAALELEIDESIRPGTRFPLEMAQDADVGSNSLLTYELSSNPSFSLATKDSQGGSKPELVLERALDREKQSSFELLLTAVDGGDPVRSGTVQVRVNVTDANDNPPVFAQDRYRTSLREDTPPGSEVLKVSASDADAGTNAHITYRFREMLDKVLRTFVVDADTGSITLREALDFEDMRTYSLDVEAKDGGGLVAHCKVEVEVLDVNDNAPDIEILSLSSPVPEDAPVGTVVALLKVRDRDSGENGEVSCELSGEAPLSLVASSGGSSKVVTASALDREQACEHRVTVVARDRGSPSLWSSRELVLEVSDVNDNAPVFEEASYSAYVRENNLVGALVLRVVARDSDAGANGRVSYWLSGGSAGAAGAAPLVSVEARSGAVYAQRSLDYEQCREFAVAVRAQDGGSPARSSTATVRVFVLDQNDNAPRVLYPPPAAGAASPGSAGSAFEVVPRSASAGYLVGKVVAVDADAGRNAWLSYELVQASEPALFRVGLQSGEVRTARAVSERDAAKQRLVAVVKDHGEPALSATATLHVVLAESLQEALPELSERAAGAEAAGELQFWLVLALALLSALLVLSVALLVLARLRRAGPPAVLRCLGAQRLSLAGAAFPADFCEGTLPYSYNLCVAAPPRAAAEAAWPPPPLPIVPAEELVAGEPCEKPSPSSSAVPGEPPAEPDALQVSAVLDPTFPRRMSRLFELPVLKAGRACLVGARCVQCREEAAGAAVDR…
SIO_010081: LOC116794575
subclass of: SO_0000673
so part of: LOC116794575
location: complement(join(2605671..2605897,2610060..2610148,2623129..2623187,2674520..2677382,2678586..2681397,2684041..2684182,2687822..2690723))
location: region:2605671-2690723:-1
so has part: feature:2687822-2690723:-1:exon
so has part: feature:2684041-2684182:-1:exon
so has part: feature:2678586-2681397:-1:exon
so has part: feature:2674520-2677382:-1:exon
so has part: feature:2623129-2623187:-1:exon
so has part: feature:2610060-2610148:-1:exon
so has part: feature:2605671-2605897:-1:exon

XP_032559238.1
type: Protein
SIO_000068: ncbiprotein

position:2605671:-1
position: 2605671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2690723:-1
position: 2690723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2687822-2690723:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2684041-2684182:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2678586-2681397:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2674520-2677382:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2623129-2623187:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2610060-2610148:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2605671-2605897:-1:exon

LOC116794576
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794576
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2690940..2703586)
location: region:2690940-2703586:-1
so has part: feature:2690940-2703586:-1:exon
subclass of: SO_0000010

116794576
type: Gene
SIO_000068: ncbigene

position:2690940:-1
position: 2690940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2703586:-1
position: 2703586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2690940-2703586:-1:exon

LOC116794576
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794576
product: protocadherin gamma-A10-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 125 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032703348.1
SIO_010081: LOC116794576
subclass of: SO_0000673
so part of: LOC116794576
location: complement(join(2690940..2691008,2694107..2694112,2699746..2699751,2701072..2703586))
location: region:2690940-2703586:-1
so has part: feature:2701072-2703586:-1:exon
so has part: feature:2699746-2699751:-1:exon
so has part: feature:2694107-2694112:-1:exon
so has part: feature:2690940-2691008:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2701072-2703586:-1:exon

position:2701072:-1
position: 2701072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2699746-2699751:-1:exon

position:2699746:-1
position: 2699746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2699751:-1
position: 2699751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2694107-2694112:-1:exon

position:2694107:-1
position: 2694107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2694112:-1
position: 2694112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2690940-2691008:-1:exon

position:2691008:-1
position: 2691008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116794576
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794576
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-A10-like
translation: MCAAGRRWGRRQRVLLWGVLLAAWEAAWGQLRYSVPEEMPKGSFVGDVANDLGLQLPALPDSGVQVVSVGRTQYFSLHGKTGHLVTAERIDREQLCRLVEQCVLRCELIVEGEMKFYKIEVEVTDINDNAPSFREAQIELRTSETTAPGSRFPLAEAHDPDSGQNSLQSYELSGDEHFSLAVQTGPGGDQRPELVLAKALDREEAAFHELVLRASDGGEPSRTGTARIRVTVLDANDNAPVFSQAEYTVRVPEDVPVGSTLVTVTATDADEGLNGQVRYSLKKVSDMASDIFRLNAETGEITLLRSLDFEEGNYYELEVQAHDGGGLFDTVKVTISVTDVNDNVPEISVRSALTEISEDAPTGTVVALLHVHDRDSGANGEVRCSLDGSVSFHLEKSLEGYYRVVTARELDREQEWEYNVTVRAADGGRPSLQSSRVLCLRVLDVNDNAPVFLQERYSARLRENNVAGALVLRVRATDSDWGENARVRYRLGEGGVRGSALSSYVSVQAETGALYALRSFDYEQVREVGLWVWAEDGGSPALSSNVSVRLVIVDENDNAPQVLYPPAAAAAAASGSGWAGVELAARSSEAGALVAKVVAVDADAGQNAWLSYELAKATEPGLFRVGLHSGEVRTARSPLARDAARQSLVVLVKDHGRPALSATATLSVVLADSVAELLAELGSAARAEAEAGAAEAGGSLTRWLVLAVAAVSCLFVAFLLLLLALRLRRWRRSQQQLLAAASGALRGVPATHFVGIDGVRAFLHSYSHDVSLTDDSRKSHLRFSTDSCCHTLPARPPPDEPAPLLGDQEPAGAPQADPAPLPQVQPNKDWYKKLCRCREEIVLRGLNK
SIO_010081: LOC116794576
subclass of: SO_0000673
so part of: LOC116794576
location: complement(join(2690940..2691008,2694107..2694112,2699746..2699751,2701072..2703537))
location: region:2690940-2703537:-1
so has part: feature:2701072-2703537:-1:exon
so has part: feature:2699746-2699751:-1:exon
so has part: feature:2694107-2694112:-1:exon
so has part: feature:2690940-2691008:-1:exon

XP_032559239.1
type: Protein
SIO_000068: ncbiprotein

position:2703537:-1
position: 2703537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2701072-2703537:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2699746-2699751:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2694107-2694112:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2690940-2691008:-1:exon

LOC116794577
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794577
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2705004..2707726)
location: region:2705004-2707726:-1
so has part: feature:2705004-2707726:-1:exon
subclass of: SO_0000010

116794577
type: Gene
SIO_000068: ncbigene

position:2705004:-1
position: 2705004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2707726:-1
position: 2707726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2705004-2707726:-1:exon

LOC116794577
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794577
product: protocadherin gamma-B5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 94 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032703349.1
SIO_010081: LOC116794577
subclass of: SO_0000673
so part of: LOC116794577
location: complement(join(2705004..2705056,2705206..2707726))
location: region:2705004-2707726:-1
so has part: feature:2705206-2707726:-1:exon
so has part: feature:2705004-2705056:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2705206-2707726:-1:exon

position:2705206:-1
position: 2705206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2705004-2705056:-1:exon

position:2705056:-1
position: 2705056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116794577
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794577
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-B5-like
translation: MSGGRRASGGPGGGRALVLGAVLLGLCWRAAAERLRYSMAEELPRGSLVGPLARDLGLSAHELPARKLRLSADKQYFTVSEGNGNLYVSERLDREELCGNLASCSVSFEALVHNPLNVFRVEVAIEDVNDNSPVFSKDTLELEIGEWTVPAARFPVEMARDADVGSNSLITYQLSSNPSFSLAVKEITSGKKQPELVLERALDREKQSSFELMLTAVDGGDPARSGTVQVRVNVSDANDNPPVFSKNVYDAQVVENLPAGSLVLQVRATDADAGSNGRVSYSFVNVPAGIRELFSIDKESGEIRTERPLDFEEATKYSFGLEARDGGGLVGHCEVQIDVIDENDNAPEITILSLSSPVPEDAPVGTVVALLKVRDRDSGENGEVSCELSGEAPLSLVASSGGSSKVVTASALDREQACEHRVTVVARDRGSPSLWSSREVVLEVSDVNDNAPVFEEASYSAYVRENNLVGALVLRVVARDSDAGANGRVSYWLSGGSAGAAGAAPLVSVEARSGAVYAQRSLDYEQCREFAVAVRAQDGGSPARSSTATVRVFVLDQNDNAPRVLYPPPASGAASPGSAGSAFEVVPRSASAGYLVGKVVAVDADAGRNAWLSYELVQASEPALFRVGLQSGEVRTARAVSERDAAKQRLVAVVKDHGEPALSATATLHVVLAESLQEALPELSERAAGAEAAGELQFWLVLALALLSALLVLSVALLVLARLRRAGPPAVLRCLGAQRLSLAGAAFPADFCEGTLPYSYNLCVAAAPRAAAEAAWPPPPLPIVPAEELVAGEPREKPSPSSSVVLGEPPTDPDALQVCGANLHFLRRELSQMSA
SIO_010081: LOC116794577
subclass of: SO_0000673
so part of: LOC116794577
location: complement(join(2705004..2705056,2705206..2707660))
location: region:2705004-2707660:-1
so has part: feature:2705206-2707660:-1:exon
so has part: feature:2705004-2705056:-1:exon

XP_032559240.1
type: Protein
SIO_000068: ncbiprotein

position:2707660:-1
position: 2707660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2705206-2707660:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2705004-2705056:-1:exon

LOC116794578
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794578
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2713843..2720793)
location: region:2713843-2720793:-1
so has part: feature:2713843-2720793:-1:exon
subclass of: SO_0000010

116794578
type: Gene
SIO_000068: ncbigene

position:2713843:-1
position: 2713843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2720793:-1
position: 2720793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2713843-2720793:-1:exon

LOC116794578
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794578
product: uncharacterized LOC116794578
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 197 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032703350.1
SIO_010081: LOC116794578
subclass of: SO_0000673
so part of: LOC116794578
location: complement(join(2713843..2713878,2714157..2716986,2718274..2720793))
location: region:2713843-2720793:-1
so has part: feature:2718274-2720793:-1:exon
so has part: feature:2714157-2716986:-1:exon
so has part: feature:2713843-2713878:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2718274-2720793:-1:exon

position:2718274:-1
position: 2718274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2714157-2716986:-1:exon

position:2714157:-1
position: 2714157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2716986:-1
position: 2716986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2713843-2713878:-1:exon

position:2713878:-1
position: 2713878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116794578
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794578
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(2716770..2716772),aa:OTHER)
transl except: (pos:complement(2716719..2716721),aa:OTHER)
product: LOW QUALITY PROTEIN: uncharacterized protein LOC116794578
translation: MSGGRRASGGPGGGRALVLGAVLLGLCWRAAAERLRYSMAEELPRGSLVGPLARDLGLSAHELPARKLRLSADKQYFTVSEGNGNLYVSERLDREELCGESLSCSVSFEALVHNPLNVFHVEVSIEDVNDNAPRFLQDKFEMEINELTSPGARFAVGVAEDPDVGRNSLQGYELETNGYFAVEVKESQDGNKFAELVLHRALDRESEHSLRLMLTALDGGDPPRSGTAQLWINVTDANDNPPVFAQDRYRASLREDTPPGSTVLNVSASDADSGTNAHITYSFGKMPAKVLQKFMMDAKSGTITLKEGLDFEDTRGYALLVEAKDGGGLVAHCKVEVEVLDVNDNAPDIEILSLLSPVSEDAPVGTVVALLKIRDRDSGENGEVSCELSGEAPLSLVASSGGSSKVVTASALDREQACEHRVTVVARDRGSPSLWSSRELVLEVSDVNDNAPVFEEASYSAYVRENNLVGALVLRVVARDSDAGANGRVSYWLSGGSAGAAGAAPLVSVEARSGAVYAQRSLDYEQCREFAVAVRAQDGGSPARSSTATVRVFVLDQNDNAPRVLYPPPASGAASPGSAGSAFEVVPRSASAGYLVGKVVAVDADAGRNAWLSYELVQASEPALFRVGLQSGEVRTARAVSERDAAKQRLVAVVKDHGEPALSATATLHVVLAESLQEALPELSERAAGAEAAGELQFWLVLALALLSALLVLSVALLVLARLRRAGPPAVLRCLGAQRLSLAGAAFPADFCEGTLPYSYNLCVAAPPRAAAAEAAWPPPPLPIVPAEELVAGEPCEKPSPSSSAVLGEPPAEPDALQLPVLKAGRACLVGARCVQCREEAAGAAVDREEREEGGXALQPRPLRPGSIAGSLDSRVGKWSVSDRPCSAEPXYSEAERSATAAESRKSXPEREPERGSAAGICRRCCGAGGAAAEMCAAGRRWGRRQRVLLWGVLLAAWEAAWGQLRYSVPEEMPKGSFVGDVANDLGLQMPELRDHGIRLLDKGRTQYFALHGKTGHLVTAERIDREQLCRLVERCVLRCELIVEGEMKVYGIEVEIMDINDNAPSFKDIELEQRISETTAPGSRFPLPRAHDPDSARNSLQNYELSGDEHFSLAVQTGPGGDQRPELVLAKALDREEAAFHELVLRASDGGEPSRTGTARIRVTVLDANDNAPVFSQAEYTVRVPEDVPVGSVLVTVTATDADEGLNGHVKYSFNKISDRESELFHLDSESGKITIKGYLDFEEISLHELEVQVRDGGDLSDTTKVEITVTDVNDNAPELTISSAVREISEDAPSGTVVALLHVHDRDSGANGEVRCSLDGGIPFRLEKSYEDYYRVVTARELDREQEWEYNVTVRAADGGGPSLQSSRVLCLRVLDVNDNAPVFLQERYSARLRENNVAGALVLRVRATDSDWGENARVRYRLGEGGVRGSALSSYVSVQAETGALYALRSFDYEQVREVGLWVWAEDGGSPALSSNVSVRLVIVDENDNAPQVLYPPAAAAAASGSGRAGVELAARSSEAGALVAKVVAVDADAGQNAWLSYELAKATEPGLFRVGLHSGEVRTARSPLARDAARQSLVVLVKDHGRPALSATATLSVVLADSVAELLAELGSAARAEAEAGAAEAGGSLTRWLVLAVAAVSCLFVAFLLLLLALRLRRWRRSQQQLLAAASGALRGVPATHFVGIDGVRAFLHSYSHDVSLTDDSRKSHLRFSTDSCCHTLPARPPPDEPAPLLANQEPAGAQQADPAPLPVSSSDQTCSVFCTDVLPH
SIO_010081: LOC116794578
subclass of: SO_0000673
so part of: LOC116794578
location: complement(join(2713843..2713878,2714157..2716986,2718274..2720727))
location: region:2713843-2720727:-1
so has part: feature:2718274-2720727:-1:exon
so has part: feature:2714157-2716986:-1:exon
so has part: feature:2713843-2713878:-1:exon

XP_032559241.1
type: Protein
SIO_000068: ncbiprotein

position:2720727:-1
position: 2720727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2718274-2720727:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2714157-2716986:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2713843-2713878:-1:exon

LOC116794579
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794579
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2759823..2762384)
location: region:2759823-2762384:-1
so has part: feature:2759823-2762384:-1:exon
subclass of: SO_0000010

116794579
type: Gene
SIO_000068: ncbigene

position:2759823:-1
position: 2759823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2762384:-1
position: 2762384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2759823-2762384:-1:exon

LOC116794579
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794579
product: protocadherin gamma-B5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 73 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032703351.1
SIO_010081: LOC116794579
subclass of: SO_0000673
so part of: LOC116794579
location: complement(2759823..2762384)
location: region:2759823-2762384:-1
so has part: feature:2759823-2762384:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2759823-2762384:-1:exon

LOC116794579
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794579
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-B5-like
translation: MSGGRRASGGPGGGRALVLGAVLLGLCWRAAAERLRYSMAEELPRGSLVGPLARDLGLSAHELPARKLRLSADKQYFTVSEGNGNLYVSERLDREELCGESLSCSVSFEALVHNPLNVFLVEVAIEDINDNSPSFGKAVLELEIGEWALPAARFPLEVARDADLGSNSLLTYELSSNPSFSLATRDSPDGSEPPELVLERALDREKQSFFELVLTATDGGDPARSGTVQVRVNVTDLNDNPPLFSKKVYEARVAENLPAGSLVLQVRATDADAGSNGRVSYSFGNVPDGIRELFSVDSESGEITTAVPLDFEEKSKYSFSLGARDGGGLTDTCKVQIDITDENDNAPEITILSLSSPVPEDAPVGTVVALLKVRDRDCGENGEVSCELSGEAPLSLVASSGGSSKVVTASALDREQACEHRVTVVARDRGSPSLWSSRELVLEVSDVNDNAPVFEEASYSAYVRENNLVGALVLRVVARDSDAGANGRVSYWLSGGSAGAAGAAPLVSVEARSGAVYAQRSLDYEQCREFAVAVRAQDGGSPARSSTATVRVFVLDQNDNAPRVLYPPPASGASGASVGSAFEVVPRSASAGYLVGKVVAVDADAGRNAWLSYELVQASEPALFRVGLQSGEVRTARAVSERDAAKQRLVAVVKDHGEPALSATATLHVVLAESLQEALPELSERAAGAEAAGELQFWLVLALALLSALLVLSVALLVLARLRRAGPPAVLRCLGAQRLSLAGAAFPADFCEGTLPYSYNLCVPAPPRSTAAEAAWPPPPLPIVPAEELVAGEPSEKPSPSSSAVVEQPPTDLHAPQVCKRTIFPCSLGFN
SIO_010081: LOC116794579
subclass of: SO_0000673
so part of: LOC116794579
location: complement(2759823..2762318)
location: region:2759823-2762318:-1
so has part: feature:2759823-2762318:-1:exon

XP_032559242.1
type: Protein
SIO_000068: ncbiprotein

position:2762318:-1
position: 2762318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2759823-2762318:-1:exon

LOC116794580
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794580
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2769606..2798955)
location: region:2769606-2798955:-1
so has part: feature:2769606-2798955:-1:exon
subclass of: SO_0000010

116794580
type: Gene
SIO_000068: ncbigene

position:2769606:-1
position: 2769606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2798955:-1
position: 2798955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2769606-2798955:-1:exon

LOC116794580
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794580
product: protocadherin gamma-A12-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 123 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032703352.1
SIO_010081: LOC116794580
subclass of: SO_0000673
so part of: LOC116794580
location: complement(join(2769606..2771929,2798722..2798955))
location: region:2769606-2798955:-1
so has part: feature:2798722-2798955:-1:exon
so has part: feature:2769606-2771929:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2798722-2798955:-1:exon

position:2798722:-1
position: 2798722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2769606-2771929:-1:exon

position:2771929:-1
position: 2771929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116794580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794580
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-A12-like
translation: MCAAGRRWGRRQRVLLWGVLLAAWEAAWGQLRYSVPEEMPKGSFVGDVAKDLGLQLPALPDRGVRIIDRGRTQYFVLHGKTGHLVTAERIDREQLCRLVEQCVLRCELIVEGEMQMYGIEIEITDINDNAPNFKDTEVEQRISETTALGSRFPLAEAHDPDSGRNSLQSYELSGDEHFSLAVQTGPGGDQRPELVLAKALDREEAAFHELVLRASDGGEPSRTGTARIRVTVLDANDNAPVFSQAEYTVRVAEDVPVGSVLVTVTATDPDEGPNGEVKYLIKKATDLVLQTFQLDAEKGATTLVQSLDFEEGAYYELEVQARDGGGLSDTAKIGITVTDVNDNVPEISVRSALSEISEDAPQGTVVALLHVQDQDSGANGEVRCSLDGGHPFRLERSFEGYYRVMTAELLDREQEWEYNVTVRAADGGGPSLQSSRVLCLRVLDVNDNAPVFLQERYSARLRENNVAGALVLRVRATDSDWGENARVRYRLGEGGVRGSALSSYVSVQAETGALYALRSFDYEQVREVGLWVWAEDGGSPALSSNVSVRLVIVDENDNAPQVLYPPAAAAAASGSGWAGVELAARSSEAGALVAKVVAVDADAGQNAWLSYELAKATEPGLFRVGLHSGEVRTARSPLARDAARQSLVVLVKDHGRPALSATATLSVVLADSVAELLAELGSAARAEAEAGAAEAGGSLTRWLVLAVAAVSCLFVAFLLLLLALRLRRWRRSQQQLLAAASGALRGVPATHFVGIDGVRAFLHSYSHDVSLTDDSRKSHLRFSTDSCCHTLPARPPPDEPAPLLGDQEPAGAQQADPAPLPVSSSYWGVSVTVSSASFALYFP
SIO_010081: LOC116794580
subclass of: SO_0000673
so part of: LOC116794580
location: complement(join(2769606..2771929,2798722..2798929))
location: region:2769606-2798929:-1
so has part: feature:2798722-2798929:-1:exon
so has part: feature:2769606-2771929:-1:exon

XP_032559243.1
type: Protein
SIO_000068: ncbiprotein

position:2798929:-1
position: 2798929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2798722-2798929:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2769606-2771929:-1:exon

LOC116794301
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794301
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2772264..2785079)
location: region:2772264-2785079:-1
so has part: feature:2772264-2785079:-1:exon
subclass of: SO_0000010

116794301
type: Gene
SIO_000068: ncbigene

position:2772264:-1
position: 2772264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2785079:-1
position: 2785079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2772264-2785079:-1:exon

LOC116794301
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794301
product: uncharacterized LOC116794301
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 228 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032702881.1
SIO_010081: LOC116794301
subclass of: SO_0000673
so part of: LOC116794301
location: complement(join(2772264..2772464,2773640..2773702,2773796..2776622,2782445..2782467,2782585..2785079))
location: region:2772264-2785079:-1
so has part: feature:2782585-2785079:-1:exon
so has part: feature:2782445-2782467:-1:exon
so has part: feature:2773796-2776622:-1:exon
so has part: feature:2773640-2773702:-1:exon
so has part: feature:2772264-2772464:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2782585-2785079:-1:exon

position:2782585:-1
position: 2782585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2782445-2782467:-1:exon

position:2782445:-1
position: 2782445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2782467:-1
position: 2782467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2773796-2776622:-1:exon

position:2773796:-1
position: 2773796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2776622:-1
position: 2776622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2773640-2773702:-1:exon

position:2773640:-1
position: 2773640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2773702:-1
position: 2773702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2772264-2772464:-1:exon

position:2772464:-1
position: 2772464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116794301
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794301
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116794301
translation: MCAAGRRWGRRQRVLLWGVLLAAWEAAWGQLRYSVPEEMPKGSFVGDVAKDLRLQMPALADRGVRVVSDGRTQYFALHGKTGHLVTAQRIDREQLCRLVEQCVLRCELIVEGEMKFYEIEVEIMDINDNSPTFKDIEVEEKISEMTAPGSRFTLPRAHDPDSGRNSLQSYELSGDEHFSLAVQTGPGGDQRPELVLAKALDREEAAFHELVLRASDGGEPSRTGTARIRVTVLDANDNAPVFSQAEYTVRVPEDVPVGSVLVTVTATDADEGLNGHVRYSLKKVSDMASDIFHLDSDTGAITLVQNLDFEEGDYYELELQARDGGGLLDTTKVAITVTDVNDNVPEISVRSALTEISEDAPSGTVVALLHVQDLDSGANGEVRCSLDGSLPFRLESSQGSYYRVVTSRELDREQEWEYNVTVRAADGGRPSLQSSRVLCLRVLDVNDNAPVFLQERYSARLRENNVAGALVLRVRATDSDWGENARVRYRLGEGGVRGSALSSYVSVQAETGALYALRSFDYEQVREVGLWVWAEDGGSPALSSNVSVRLVIVDENDNAPQVLYPPAAATAAAASGSGWAGVELAARSSEAGALVAKVVAVDADAGQNAWLSYELAKATEPGLFRVGLHSGEVRTARSPLARDAARQSLVVLVKDHGRPALSATATLSVVLADSVAELLAELGSAARAEAEAGAAEAGGSLTRWLVLAVAAVSCLFVAFLLLLLALRLRRWRRSQQQLLAAASGALRGVPATHFVGIDGVRAFLHSYSHDVSLTDDSRKSHLRFSTDSCCHTLPARPPPDEPAPLLANQEPAGAQQADPAPLPVYMWGRQNPSRAQSWSPLVAGVRRLQCCVGASGCRCWPPASVAGAAAAAGGASCPRRLLARPGSAGQSGSGPGSRGERRRGAGSRGVRVGGGGGLGALCRALRRPRGAAAREAGQRQEPGELGERAPWAMSGGRRASGGPGGGRALVLGAVLLGLCWRAAAERLRYSMAEELPRGSLVGPLARDLGLSAHELPARKLRVASAGKKQLKYFTVSEENGNLYVSERLDREELCGESLSCSVSFEALVHNPLNVFRVEVAIEDVNDNSPTFSKDALDLEIGEWTVPGARFPLEMARDADVGSNSLITYQLSSNPFFSLAMEEIPGGKKQPELALERALDREKQSSFELMLTAVDGGDPARSGTVQVRVNVTDLNDNSPVFSKRVYEARVAENLPAGSLVLQVRATDADAGSNGRVSYSFGNIPAGIRELFSIDKESGEIRTERPLDFEEKNKYRFGLEARDGGGLTGHCEVQIDVTDENDNAPEITILSLSSPVPEDAPVGTVVALLNVNDPDSGENGEVSCELSGEAPLSLVASSGGSSKVVTASALDREQACEHRVTVVARDRGSPSLWSSRELVLEVSDVNDNAPVFEEASYSAYVRENNLVGALVLRVVARDSDAGANGRVSYWLSGGSAGAAGAAPLVSVEARSGAVYAQRSLDYEQCREFAVAVRAQDGGSPARSSTATVRVFVLDQNDNAPRVLYPPPASGAASPGSAGSAFEVVPRSASAGYLVGKVVAVDADAGRNAWLSYELVQASEPALFRVGLQSGEVRTARAVSERDAAKQRLVAVVKDHGEPALSATATLHVVLAESLQEALPELSERAAGAEAAGELQFWLVLALALLSALLVLSVALLVLARLRRAGPPAVLRCLGAQRLSLAGAAFPADFCEGTLPYSYNLCVPAPPRPAAEAAWPPPPLPIVPAEELVAGEPCEKPSPSSSAVLGEPPADPDAPQLVPVSVSTDAGNNSAPFRQQAGGHVSLALGACSAGRRLRAPLLTERSERKVGALQPRPLRPGSIAGSLDSWVGKRSVSKRPGGGDSR
SIO_010081: LOC116794301
subclass of: SO_0000673
so part of: LOC116794301
location: complement(join(2772264..2772464,2773640..2773702,2773796..2776622,2782445..2782467,2782585..2785053))
location: region:2772264-2785053:-1
so has part: feature:2782585-2785053:-1:exon
so has part: feature:2782445-2782467:-1:exon
so has part: feature:2773796-2776622:-1:exon
so has part: feature:2773640-2773702:-1:exon
so has part: feature:2772264-2772464:-1:exon

XP_032558772.1
type: Protein
SIO_000068: ncbiprotein

position:2785053:-1
position: 2785053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2782585-2785053:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2782445-2782467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2773796-2776622:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2773640-2773702:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2772264-2772464:-1:exon

LOC116794581
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794581
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2798991..2803398)
location: region:2798991-2803398:-1
so has part: feature:2798991-2803398:-1:exon
subclass of: SO_0000010

116794581
type: Gene
SIO_000068: ncbigene

position:2798991:-1
position: 2798991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2803398:-1
position: 2803398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2798991-2803398:-1:exon

LOC116794581
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794581
product: protocadherin gamma-B5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 106 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032703354.1
SIO_010081: LOC116794581
subclass of: SO_0000673
so part of: LOC116794581
location: complement(join(2798991..2799275,2800764..2803398))
location: region:2798991-2803398:-1
so has part: feature:2800764-2803398:-1:exon
so has part: feature:2798991-2799275:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2800764-2803398:-1:exon

position:2800764:-1
position: 2800764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2798991-2799275:-1:exon

position:2799275:-1
position: 2799275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116794581
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794581
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-B5-like
translation: MSGGRRASGGPGGGRALVLGAVLLGLCWRAAAERLRYSMAEELPRGSLVGPLARDLGLSAHELPARKLRVASAGKKQLKYFTVSETNGNLYVNERLDREELCGESLSCSVSFEALVHNPLNVFRVEVAIEDVNDNSPAFSKDALDLEISEWTVPGARFPLEMARDADVGSNSLITYQLSSNPSFSLAVKEITSGKKQPELALERALDREKQSFFELVLTAVDGGDPARSGTVQVRVNVTDANDNPPVFSKSIYEARVAENLPAGSLVLQVRATDADAGSNGRVFYSFINIPAGIRELFSIDKESGEIRTERPLDFEEATKYSLGLEARDGGGLIGHCEVQIDVIDENDNAPEITILSLSSPVPEDAPVGTVVALLNVNDPDSGENGEVSCELSGEAPLSLVASSGGSSKVVTTSALDREQACEHRVTVVARDRGSPSLWSSRELVLEVSDVNDNAPVFEEASYSAYVRENNLVGALVLRVVARDSDAGANGRVSYWLSGGSAGAAGAAPLVSVEARSGAVYAQRSLDYEQCREFAVAVRAQDGGSPARSSTATVRVFVLDQNDNAPRVLYPPPASGASGASVGSAFEVVPRSASAGYLVGKVVAVDADAGRNAWLSYELVQASEPALFRVGLQSGEVRTARAVSERDAAKQRLVAVVKDHGEPALSATATLHVVLAESLQEALPELSERAAGAEAAGELQFWLVLALALLSALLVLSVALLVLARLRRAGPPAVLRCLGAQRLSLAGAAFPADFCEGTLPYSYNLCVAAPPRAAAEAAWPPPPLPIVPAEELVAGEPCEKPSPSSSAVLGDPPADPDAPQLPVLKAGRACLVGARFVQCREEAAGAAVDREEREEGGSAAAPPAAARLDRWIAGFLGREAVCFQTTRRWGFEIKQGGVAGDSSLEQQVVAGAGA
SIO_010081: LOC116794581
subclass of: SO_0000673
so part of: LOC116794581
location: complement(join(2798991..2799275,2800764..2803223))
location: region:2798991-2803223:-1
so has part: feature:2800764-2803223:-1:exon
so has part: feature:2798991-2799275:-1:exon

XP_032559245.1
type: Protein
SIO_000068: ncbiprotein

position:2803223:-1
position: 2803223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2800764-2803223:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2798991-2799275:-1:exon

LOC116794582
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794582
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2810319..2827417)
location: region:2810319-2827417:-1
so has part: feature:2810319-2827417:-1:exon
subclass of: SO_0000010

116794582
type: Gene
SIO_000068: ncbigene

position:2810319:-1
position: 2810319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2827417:-1
position: 2827417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2810319-2827417:-1:exon

LOC116794582
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794582
product: uncharacterized LOC116794582
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 285 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032703355.1
SIO_010081: LOC116794582
subclass of: SO_0000673
so part of: LOC116794582
location: complement(join(2810319..2813344,2815241..2816201,2816311..2818068,2822187..2822206,2824711..2827417))
location: region:2810319-2827417:-1
so has part: feature:2824711-2827417:-1:exon
so has part: feature:2822187-2822206:-1:exon
so has part: feature:2816311-2818068:-1:exon
so has part: feature:2815241-2816201:-1:exon
so has part: feature:2810319-2813344:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2824711-2827417:-1:exon

position:2824711:-1
position: 2824711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2822187-2822206:-1:exon

position:2822187:-1
position: 2822187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2822206:-1
position: 2822206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2816311-2818068:-1:exon

position:2816311:-1
position: 2816311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2818068:-1
position: 2818068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2815241-2816201:-1:exon

position:2815241:-1
position: 2815241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2816201:-1
position: 2816201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2810319-2813344:-1:exon

position:2813344:-1
position: 2813344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116794582
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794582
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 2 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(2813111..2813113),aa:OTHER)
product: LOW QUALITY PROTEIN: uncharacterized protein LOC116794582
translation: MCAAGRRWGRRQRVLLWGVLLAAWEAAWGQLRYSVPEEMPKGSFVGDVAKDLRLQLPEVPGRGVRIIDRGRRQYFALNGKTGHLVTAERIDREQLCRLVEQCVLRCELIVEGEMKVYEIEVEITDINDNAPSFREAEIELQMSETTAPGSRFLLPRAHDPDSGQNSLQNYELSGDEHFSLAVQTGPGGDDNPELVLAKALDREEAAFHELVLRASDGGEPSRTGTARIRVTVLDANDNAPVFSQAEYTVRVPEDVPVGSTLVTVTANDVDEGHYGTVKYSMKKATDMASDIFHLDPETGDITILRSLDFEEGDSYELKVQAHDGGALFDTTKVAITVIDVNDNAPELTVTSALNEISEDAPLGTVVALLHVQDQDSGANGEVRCSLEGSVPFRLEKSLEGYYRVVTARELDREQEWEYNVTVRAADGGRPSLQSSRVLCLRVLDVNDNAPVFLQERYSARLRENNVAGALVLRVRATDSDWGENARVRYRLGEGGVRGSALSSYVSVQAETGALYALRSFDYEQVREVGLWVWAEDGGSPALSSNVSVRLVIVDENDNAPQVLYPPAAAAAASGSGWAGVELAARSSEAGALVAKVVAVDADAGQNAWLSYELAKATEPGLFRVGLRSGEVRTARSPLARDAARQSLVVLVKDHGRPALSATATLSVVLADSVAELLAELGSAARAEAEAGAAEAGGSLTRWLVLAVAAVSCLFVAFLLLLLALRLRRWRRSQQQLLAAASGALRGVPATHFVGIDGVRAFLHSYSHDVSLTDDSRKSHLRFSTDSCCHTLPARPPPDEPAPLLGDQEPAGDRPADPAPPPLYVEMLSPSRAQSRSPLVAGVRRLQCCVGASGCRCWPPASVAGAAAAAGGASCPRRLLARPGSAGQSGSGPGSRGERRRGAGSRGVRVGGGGGLGALCRALRRPRGAAAREAGQRQEPGELGERAPWAMSGGRRASGGPGGGRALVLGAVLLGLCWRAAAERLRYSMAEELPRGSLVGPLARDLGLSAHELPARKLQVASAGKKQLKYFTVSEENGNLYVSERLDREELCGESLSCSVSFEALVHNPLNVFRVEVAIEDVNDNSPVFSKDALDLEIGEWTVPGARFPVEMAQDADVGSNSLITYQLSSNPSFSLAVKEITSGKKQPELVLERALDREKQSSFELVLTAVDGGDPARSGTVQVRVNVTDLNDNPPVFSKSIYEARVAENLPAGSLVLQVRATDADAGSNGRVSYSFVNVLAGIRELFSIDKESGEIRTERPLDFEEINKYSLGLEARDGGGLTGHCEVQIDVIDENDNAPEITILSLSSPVPEDAPVGTVVALLNVNDPDSGENGEVSCELSGEAPLSLVASSGGSSKVVTASALDREQACEHRVTVVARDRGSPSLWSSRELVLEVSDVNDNAPVFEEASYSAAGAAGAAPLVSVEARSGAVYAQRSLDYEQCREFAVAVRAQDGGSPARSSTATVRVFVLDQNDNAPRVLYPPPAAGAASPGSAGSAFEVVPRSASAGYLVGKVVAVDADAGRNAWLSYELVQASEPALFRVGLQSGEVRTARAVSERDAAKQRLVAVVKDHGEPALSATATLHVVLAESLQEALPELSERAAGAEAAGELQFWLVLALALLSALLVLSVALLVLARLRRAGPPAVLRCLGAQRLSLAGAAFPADFCEGTLPYSYNLCVAASPRAAAEAAWPPPPLPIVPAEELVAGEPREKPSPSSSAVVGEPPTDPNVPQPLARHFPRAVEALSTREYSAFASVVIKEEIGWRNEKAGKPGYVGCEFSALAASCPWTRQCGRRSVRAVPGGGCGRRCXPRGARGRXGSAAAPPAAARLDRWIAGFLSREEVCFRSSRRCGAEIQRGGGVSDSSLERQVVXPEREPNRGSAAGIYRRCCGAGGAAAEMCAAGRRWGRRQRVLLWGVLLAAWEAAWGQLRYSVPEEMPKGSFVGDVANDLGLQMPELGDGGVRIIDRGRRQYFALHGKTGHLVTAERIDREQLCRLVE…
SIO_010081: LOC116794582
subclass of: SO_0000673
so part of: LOC116794582
location: complement(join(2810319..2813344,2815241..2816201,2816311..2818068,2822187..2822206,2824711..2827173))
location: region:2810319-2827173:-1
so has part: feature:2824711-2827173:-1:exon
so has part: feature:2822187-2822206:-1:exon
so has part: feature:2816311-2818068:-1:exon
so has part: feature:2815241-2816201:-1:exon
so has part: feature:2810319-2813344:-1:exon

XP_032559246.1
type: Protein
SIO_000068: ncbiprotein

position:2827173:-1
position: 2827173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2824711-2827173:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2822187-2822206:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2816311-2818068:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2815241-2816201:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2810319-2813344:-1:exon

LOC116794583
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794583
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2827258..2841945)
location: region:2827258-2841945:-1
so has part: feature:2827258-2841945:-1:exon
subclass of: SO_0000010

116794583
type: Gene
SIO_000068: ncbigene

position:2827258:-1
position: 2827258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2841945:-1
position: 2841945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2827258-2841945:-1:exon

LOC116794583
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794583
product: uncharacterized LOC116794583
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 257 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032703356.1
SIO_010081: LOC116794583
subclass of: SO_0000673
so part of: LOC116794583
location: complement(join(2827258..2827495,2828360..2828418,2829730..2832607,2839469..2841945))
location: region:2827258-2841945:-1
so has part: feature:2839469-2841945:-1:exon
so has part: feature:2829730-2832607:-1:exon
so has part: feature:2828360-2828418:-1:exon
so has part: feature:2827258-2827495:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2839469-2841945:-1:exon

position:2839469:-1
position: 2839469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2829730-2832607:-1:exon

position:2829730:-1
position: 2829730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2832607:-1
position: 2832607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2828360-2828418:-1:exon

position:2828360:-1
position: 2828360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2828418:-1
position: 2828418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2827258-2827495:-1:exon

position:2827495:-1
position: 2827495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116794583
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794583
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116794583
translation: MCSVGRRWGRRQRVLLWGVLLAAWEAAWGQLRYSVPEEMPKGSFVGDVAKDLGLQMPELRDSGVRVVTEGRTQYFVLHGKTGHLVTAERIDREQLCESLEQCVLRCEVIVEGEMKFYEIEVEIRDINDNAPNFKEIEQEETISENTAPGSRFPLPRAHDPDSGRNSLQSYELSGDEHFSLAVQTGPGGDQRPELVLAKALDREEAAFHELVLRASDGGDPFRTGTARIRVTVLDANDNAPVFSQAEYTVRVPEDVPVGSTLVTVTATDADEGLNGHVKYSLKTNAKKTSEIFQLDAETGEITLLRSLDFEQRDSYELDVQARDGGSLSDMTKVAITVTDVNDNVPEISVRSALTEISEDAPSGTVVALLQVQDRDSGANGEVRCSIDGSVPFRLESSQGSYYRVVTARELDREQEWEYNVTVRAADGGRPSLQSSRVLCLRVLDVNDNAPVFLQERYSARLRENNVAGALVLRVRATDSDWGENARVRYRLGEGGVRGSALSSYVSVQEETGALYALRSFDYEQVREVGLWVWAEDGGSPALSSNVSVRLVIVDENDNAPQVLYPPAAAAAAASGSGWAGVELAARSSEAGALVAKVVAVDADAGQNAWLSYELAKATEPGLFRVGLHSGEVRTARSPLARDAARQSLVVLVKDHGRPALSATATLSVVLADSVAELLAELGSAARAEAEAGAAEAGGSLTRWLVLAVAAVSCLFVAFLLLLLALRLRRWRRSQQQLLAAASGALRGVPATHFVGIDGVRAFLHSYSHDVSLTDDSRKSHLRFSTDSCCHTLPARPPPDEPAPLLGDQEPAGDRPADPAPPPVSSSIKRVLWRSLLLTEQRPHGRCSPSRAQSWSPLVAGVRRLQCCVGASGCRCWPPASVAGAAAAAGGASCPRRLLARPGSAGQSGSGPGSRGERRRGAGSRGVRVGGGGGLGALCRALRRPRGAAAREAGQRQEPGELGERAPWAMSGGRRASGGPGGGRALVLGAVLLGLCWRAAAERLRYSMAEELPRGSLVGPLARDLGLSAHELPARKLRLSADKQYFTVSEGNGNLYVSERLDREELCGESLSCSVSFEALVHNPLNVFRVEVAIEDVNDNSPVFSKDALDLEIGEWTVPGARFPLEMARDADVGSNSLITYQLSSNPSFSLAVEQIPGGKTQPELVLERALDREKQSSFELILTAVDGGDPARSGTVQIRVNVTDANDNPPVFSKRVYEARVAENLPAGSLVLQVRATDADAGSNGRASYSFGNIPAGIRESFSIDKESGEIRTERPLDFEEATKYRFGLEARDGGGLIGHCEVQIDVIDENDNAPEITILSLSSPVPEDAPVGTVVALLKVRDRDSGENGEVSCELSGEAPLSLVASSGGSSKVVTASALDREQACEHRVTVVARDRGSPSLWSSRELVLEVSDVNDNAPVFEEASYSAYVRENNLVGALVLRVVARDSDAGANGRVSYWLSGGSAGAAGAAPLVSVEARSGAVYAQRSLDYEQCREFAVAVRAQDGGSPARSSTATVRVFVLDQNDNAPRVLYPPPASGAASPGSAGSAFEVVPRSASAGYLVGKVVAVDADAGRNAWLSYELVQASEPALFRVGLQSGEVRTARAVSERDAAKQRLVAVVKDHGEPALSATATLHVVLAESLQEALPELSERAAGAEAAGELQFWLVLALALLSALLVLSVALLVLARLRRAGPPAVLRCLGAQRLSLAGAAFPADFCEGTLPYSYNLCVAAPPRAAAEAAWPPPPLPIVPAEELVAGEPREKPSPSSSAVVEQPPTDLHAPQNCLFYVGVQCDLKKKITWRWAGSARLVQRREEAAGAAVDREEREEGGSTAAPPAAARLDRWIAGFLDRRPGVLRSSLRRGAVLRRGIGAARAARSGES
SIO_010081: LOC116794583
subclass of: SO_0000673
so part of: LOC116794583
location: complement(join(2827258..2827495,2828360..2828418,2829730..2832607,2839469..2841945))
location: region:2827258-2841945:-1
so has part: feature:2839469-2841945:-1:exon
so has part: feature:2829730-2832607:-1:exon
so has part: feature:2828360-2828418:-1:exon
so has part: feature:2827258-2827495:-1:exon

XP_032559247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2839469-2841945:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2829730-2832607:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2828360-2828418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2827258-2827495:-1:exon

LOC116794584
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794584
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2842027..2846779)
location: region:2842027-2846779:-1
so has part: feature:2842027-2846779:-1:exon
subclass of: SO_0000010

116794584
type: Gene
SIO_000068: ncbigene

position:2842027:-1
position: 2842027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2846779:-1
position: 2846779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2842027-2846779:-1:exon

LOC116794584
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794584
product: protocadherin gamma-B5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032703357.1
SIO_010081: LOC116794584
subclass of: SO_0000673
so part of: LOC116794584
location: complement(join(2842027..2842290,2844142..2846779))
location: region:2842027-2846779:-1
so has part: feature:2844142-2846779:-1:exon
so has part: feature:2842027-2842290:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2844142-2846779:-1:exon

position:2844142:-1
position: 2844142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2842027-2842290:-1:exon

position:2842290:-1
position: 2842290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116794584
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794584
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-B5-like
translation: MSGGRRASGGPGGGRALVLGAVLLGLCWRAAAERLRYSMAEELPRGSLVGPLARDLGLSAHELPARKLQVASAGKKQLKYFTVSEGNGNLYVSERLDREELCGESLSCSVSFEALVHNPLNVFRVEVAIEDVNDNSPVFSKDALELEIGELISPSARFPLEMAQDADVGSNSLITYQLSSNPSFSLAVEEIPGGKTQPELVLERALDREKQSSFELILTAVDGGDPVRSGTVQIRVNVTDANDNPPVFSKRVYEARVAENLPAGSLVLQVRATDADAGSNGRVSYSFVNVPAGIRELFSVDSESGEIKTAGPLDFEEKNKYSFGLEARDGGGLTGHCEVQIDVIDENDNAPEITILSLSSPVPEDAPVGTVVALLNVNDPDSGENGEVSCELSGEAPLSLVASSGGSSKVVTASALDREQACEHRVTVVARDRGSPSLWSSRELVLEVSDVNDNAPVFEEASYSAYVRENNLVGALVLRVVARDSDAGANGRVSYWLSGGSAGAAGAAPLVSVEARSGAVYAQRSLDYEQCREFAVAVRAQDGGSPARSSTATVRVFVLDQNDNAPRVLYPPPASGAASPGSAGSAFEVVPRSASAGYLVGKVVAVDADAGRNAWLSYELVQASEPALFRVGLQSGEVRTARAVSERDAAKQRLVAVVKDHGEPALSATATLHVVLAESLQEALPELSERAAGAEAAGELQFWLVLALALLSALLVLSVALLVLARLRRAGPPAVLRCLGAQRLSLAGAAFPADFCEGTLPYSYNLCVAAPPRAALEAAWPPPPLPIVPAEELVAGEPCEKPSPSSSAVPGELPTDPDAPQPVGKAEQRESSLVLGACSAGRRLRVPLLTERSERKVGALQPRPLRPGSIAGSLDSWIGKRSVSDRPGGADTRYREAEWSATGAGSGS
SIO_010081: LOC116794584
subclass of: SO_0000673
so part of: LOC116794584
location: complement(join(2842027..2842290,2844142..2846604))
location: region:2842027-2846604:-1
so has part: feature:2844142-2846604:-1:exon
so has part: feature:2842027-2842290:-1:exon

XP_032559248.1
type: Protein
SIO_000068: ncbiprotein

position:2846604:-1
position: 2846604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2844142-2846604:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2842027-2842290:-1:exon

LOC116794585
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794585
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2852994..2870409)
location: region:2852994-2870409:-1
so has part: feature:2852994-2870409:-1:exon
subclass of: SO_0000010

116794585
type: Gene
SIO_000068: ncbigene

position:2852994:-1
position: 2852994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2870409:-1
position: 2870409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2852994-2870409:-1:exon

LOC116794585
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794585
product: protocadherin gamma-A10-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032703358.1
SIO_010081: LOC116794585
subclass of: SO_0000673
so part of: LOC116794585
location: complement(join(2852994..2853035,2853670..2854923,2869198..2870409))
location: region:2852994-2870409:-1
so has part: feature:2869198-2870409:-1:exon
so has part: feature:2853670-2854923:-1:exon
so has part: feature:2852994-2853035:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2869198-2870409:-1:exon

position:2869198:-1
position: 2869198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2853670-2854923:-1:exon

position:2853670:-1
position: 2853670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2854923:-1
position: 2854923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2852994-2853035:-1:exon

position:2853035:-1
position: 2853035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116794585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794585
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-A10-like
translation: MCSVGRRWGRRQRVLLWGVLLAAWEAAWGQLRYSVPEEMPKGSFVGDVTKDLGLQIPSLSDRGVRVVTEGTRQHFALHGKTGHLVTAERIDREQLCRLVEKCVLRCELIVEAEMKFYGIEVEITDINDNAPSFREAEKDLRLSETTAPGSRFPLAEAHDPDSGRNSLQSYELSSDEHFSLAVQTGPGGDQRPELVLAKVLDREEAAFHELVLRASDGGEPSRTGTARIRVTVLDANDNAPVFSQAEYTVRVPEDVPVGSTLVTVTATDADEGPNGHVKYSFHKISDRASELLYLDSETGEITVKYDLDFEEFSSYELEVQARDGGELSDTAKVVITVTDVNDNVPKISVRSALNEISEDAPSGTVVALLHVQDRDSGANGEVRCSIDGAVPFHLEKSLEGYYRVVTARELDREQEWEYNVTVRAADGGRPSLQSSRVLCLRVLDVNDNAPVFLQERYSARLRENNVAGALVLRVRATDSDWGENARVRYRLGEGGVRGSALSSYVSVQAETGALYALRSFDYEQVREVGLWVWAEDGGSPALSSNVSVRLVIVDENDNAPQVLYPPAAAAAAASGSGWAGVELAARSSEAGALVAKVVAVDADAGQNAWLSYELAKATEPGLFRVGLHSGEVRTARSPLARDAARQSLVVLVKDHGRPALSATATLSVVLADSVAELLAELGSAARAEAEAGAAEAGGSLTRWLVLAVAAVSCLFVAFLLLLLALRLRRWRRSQQQLLAAASGALRGVPATHFVGIDGVRAFLHSYSHDVSLTADSRKSHLRFSTDSCCHTLPARPPPDEPAPLLGDQEPSCAPQADPAPLPVDVISPLTAELSA
SIO_010081: LOC116794585
subclass of: SO_0000673
so part of: LOC116794585
location: complement(join(2852994..2853035,2853670..2854923,2869198..2870409))
location: region:2852994-2870409:-1
so has part: feature:2869198-2870409:-1:exon
so has part: feature:2853670-2854923:-1:exon
so has part: feature:2852994-2853035:-1:exon

XP_032559249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2869198-2870409:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2853670-2854923:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2852994-2853035:-1:exon

LOC116794573
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794573
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2856217..2861077)
location: region:2856217-2861077:-1
so has part: feature:2856217-2861077:-1:exon
subclass of: SO_0000010

116794573
type: Gene
SIO_000068: ncbigene

position:2856217:-1
position: 2856217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2861077:-1
position: 2861077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2856217-2861077:-1:exon

LOC116794573
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794573
product: protocadherin gamma-B5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 94 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032703344.1
SIO_010081: LOC116794573
subclass of: SO_0000673
so part of: LOC116794573
location: complement(join(2856217..2856480,2858339..2861077))
location: region:2856217-2861077:-1
so has part: feature:2858339-2861077:-1:exon
so has part: feature:2856217-2856480:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2858339-2861077:-1:exon

position:2858339:-1
position: 2858339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2856217-2856480:-1:exon

position:2856480:-1
position: 2856480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116794573
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794573
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-B5-like
translation: MSGGRRASGGPGGGRALVLGAVLLGLCWRAAAERLRYSMAEELPRGSLAGPLARDLGLSAHELPARKLRLSADKQYFTVSEGNGNLYVSERLDREELCGESLSCSVSFEALVHNPLNVFHVEVAIEDVNDNSPSFSKAVLELEIGEWTPPGARFPLEMAQDEDVGSNSLLTYQLTSSPSFSLALKESPDGSKQPELVLERALDREKQSSFELVMTAVDGGKPMRTGTVEVRINVTDANDNPPVFSQDRYHTSLREDALPGSEVLKVSATDADAGTNARITYHFGKTPAKVLQKFVVDKESGTITLQEPLDFENTRAFSLPVEARDGGGLVAHSKVEVEVLDVNDNAPEITILSLSSPVPEDAPVGTVVALLKVNDPDSGENGEVSCELSGEAPLSLVASSGGSSKVVTASALDREQACEHRVTVVARDRGSPSLWSSRELVLEVSDVNDNAPVFEEASYSAYVRENNLVGALVLRVVARDSDAGANGRVSYWLSGGSAGAAGAAPLVSVEARSGAVYAQRSLDYEQCREFAVAVRAQDGGSPARSSTATVRVFVLDQNDNAPRVLYPPPASGAASPGSAGSAFEVVPRSASAGYLVGKVVAVDADAGRNAWLSYELVQASEPALFRVGLQSGEVRTARAVSERDAAKQRLVAVVKDHGEPALSATATLHVVLAESLQEALPELSERAAGAEAAGELQFWLVLALALLSALSVLSVALLVLARLRRAGPPAVLRCLGAQRLSLAGAAFPADFCEGTLPYSYNLCVAAPPRSTAAEAVWPPPPLPIVPAEELMAGEPREKPSPSSSAVLGELPTDPDAPQPVGKAEQRESSLVLGACSAGRRLRAPLLTERSERKVGALQPRPLRPGSIAGSLDSWIGKRSVSDRPLGADPRYSEAEGSATGAGSGS
SIO_010081: LOC116794573
subclass of: SO_0000673
so part of: LOC116794573
location: complement(join(2856217..2856480,2858339..2860792))
location: region:2856217-2860792:-1
so has part: feature:2858339-2860792:-1:exon
so has part: feature:2856217-2856480:-1:exon

XP_032559235.1
type: Protein
SIO_000068: ncbiprotein

position:2860792:-1
position: 2860792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2858339-2860792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2856217-2856480:-1:exon

LOC116794586
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794586
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2870535..2874734)
location: region:2870535-2874734:-1
so has part: feature:2870535-2874734:-1:exon
subclass of: SO_0000010

116794586
type: Gene
SIO_000068: ncbigene

position:2870535:-1
position: 2870535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2874734:-1
position: 2874734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2870535-2874734:-1:exon

LOC116794586
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794586
product: protocadherin gamma-B5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 103 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032703359.1
SIO_010081: LOC116794586
subclass of: SO_0000673
so part of: LOC116794586
location: complement(join(2870535..2870696,2872287..2874734))
location: region:2870535-2874734:-1
so has part: feature:2872287-2874734:-1:exon
so has part: feature:2870535-2870696:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2872287-2874734:-1:exon

position:2872287:-1
position: 2872287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2870535-2870696:-1:exon

position:2870696:-1
position: 2870696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116794586
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794586
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-B5-like
translation: MKVGPAAQGWAAAGRVALLAVLLPLCWRAAAERLRYSIPEELPRGSLVGPLARDLGLSAHELPARKLRIVAGDEKQYFTLGEGNTNLRVNERIDREGICGAVSPCVLRLEAVMENPFDMFHVSVTIQDINDNAPRFNKEFVTIEIIESTPPGTRFPLGSGRDPDIGANSLQKYELTPNPLFSLLVRESPDGTKHPELVLEKILDREEQRNHHLILTALDGGDPVRSGTAQIKINVTDANDNPPVFTKEIYKVRLMENLPEGSLAFQVKATDSDEGTNAEITYSFSDIADSARQLFSLDPKTGDVKVTGLLDYEERKYYEASVEGKDGGGLTAHAKVHIDILDVNDNAPLLSLLPILNPIPEDSVPNTVVAVINVRDKDSGENGELSCNMDGNLPFRLETSSENTYKLIIASALDREAVSAYNITITARDRGSPSLWSSRELVLEVSDVNDNAPVFEEASYSAYVRENNLVGALVLRVVARDSDAGANGRVSYWLSGGSAGAAGAAPLVSVEARSGAVYAQRSLDYEQCREFAVAVRAQDGGSPARSSTATVRVFVLDQNDNAPRVLYPPPASGAASPGSAGSAFEVVPRSASAGYRVGKVVAVDADAGRNAWLSYELVQASEPALFRVGLQSGEVRTARAVSERDAAKQRLVAVVKDHGEPALSATATLHVVLAESLQEALPELSERAAGAEAAGELQFWLVLALALLSALLVLSVALLVLARLRRAGPPAVLRCLGAQRLSLAGAAFPADFCEGTLPYSYNLCVAAPSRAAAEAAWPPPPIVPAEELVAGEPCEKPSPSSSAVVEQPLVDPDTPQCREEAAGAAVDREEREEGGSAAAPPAAARLDRPPRVWLGGRAVCDSPHAAEPS
SIO_010081: LOC116794586
subclass of: SO_0000673
so part of: LOC116794586
location: complement(join(2870535..2870696,2872287..2874734))
location: region:2870535-2874734:-1
so has part: feature:2872287-2874734:-1:exon
so has part: feature:2870535-2870696:-1:exon

XP_032559250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2872287-2874734:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2870535-2870696:-1:exon

LOC116794587
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794587
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2876114..2879454)
location: region:2876114-2879454:-1
so has part: feature:2876114-2879454:-1:exon
subclass of: SO_0000010

116794587
type: Gene
SIO_000068: ncbigene

position:2876114:-1
position: 2876114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2879454:-1
position: 2879454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2876114-2879454:-1:exon

LOC116794587
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794587
product: protocadherin gamma-A6-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 143 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032703360.1
SIO_010081: LOC116794587
subclass of: SO_0000673
so part of: LOC116794587
location: complement(join(2876114..2876152,2876933..2879454))
location: region:2876114-2879454:-1
so has part: feature:2876933-2879454:-1:exon
so has part: feature:2876114-2876152:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2876933-2879454:-1:exon

position:2876933:-1
position: 2876933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2876114-2876152:-1:exon

position:2876152:-1
position: 2876152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116794587
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794587
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-A6-like
translation: MCAAGRRWGRRQRVLLWGVLLAAWEAAWGQLRYSVPEEKPKGSFVGDVAKDLGLQLPALSHRDAHVFDTGRTRYFFLDLQNGHLSMMEQVDREEICAAVPKCVLNFEILVKQPMNIYKGEVEILDINDNAPSFPERSSVLEIIEYTAPGARFPLEKAHDPDIGVNSLQNYECSESSYFTLDMKNGDDDVKYPELILVKSLDREEQAVHNLILTATDGGSPVKSGSTIIQIVVLDGNDNAPEFTQSVYKVTVREDVTVGSRVLQVTATDRDEGTNAEVKYSFFKIPEKFDKTFKLDPESGEIEITEKLNFEEHEFYELVVQARDAGGLASHSKVHIKVADVNNHVPEIVVMSVFSPVPEDTPLGTVIAIFSVQDRDSGANGEVQCSITESLLFRLEKSFDNYYRVVTAELLDREQEWEYNVTVRAADGGGPSLQSSRVLCLRVLDVNDNAPVFLQERYSARLRENNVAGALVLRVRATDSDWGENARVRYRLGEGGVRGSALSSYVSVQAETGALYALRSFDYEQVREVGLWVWAEDGGSPALSSNVSVRLVIVDENDNAPQVLYPPAAAAAAAASGSGWAGVELAARSSEAGALVAKVVAVDADAGQNAWLSYELAKATEPGLFRVGLHSGEVRTARSPLARDAARQSLVVLVKDHGRPALSATATLSVVLADSVAELLAELGSAARAEAEAGAAEAGGSLTRWLVLAVAAVSCLFVAFLLLLLALRLRRWRRSQQQLLAAASGALRGVPATHFVGIDGVRAFLHSYSHDVSLTDDSRKSHLRFSPDSCCHTLPVRPTAFDHPDSDDLVTSDQVAESCGQASSQATVAIKEVVNWR
SIO_010081: LOC116794587
subclass of: SO_0000673
so part of: LOC116794587
location: complement(join(2876114..2876152,2876933..2879404))
location: region:2876114-2879404:-1
so has part: feature:2876933-2879404:-1:exon
so has part: feature:2876114-2876152:-1:exon

XP_032559251.1
type: Protein
SIO_000068: ncbiprotein

position:2879404:-1
position: 2879404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2876933-2879404:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2876114-2876152:-1:exon

LOC116794269
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794269
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2883031..2886119)
location: region:2883031-2886119:-1
so has part: feature:2883031-2886119:-1:exon
subclass of: SO_0000010

116794269
type: Gene
SIO_000068: ncbigene

position:2883031:-1
position: 2883031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2886119:-1
position: 2886119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2883031-2886119:-1:exon

LOC116794269
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794269
product: protocadherin beta-15-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 194 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032702815.1
SIO_010081: LOC116794269
subclass of: SO_0000673
so part of: LOC116794269
location: complement(2883031..2886119)
location: region:2883031-2886119:-1
so has part: feature:2883031-2886119:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2883031-2886119:-1:exon

LOC116794269
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794269
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-15-like
translation: MAMARQVLCVCALLSVPLARSQPIRYSVAEEADSGSLVGNLAQDAALPPAQLSARRARLLPEDGRQHFRLDRDSGRLVVADRLDREQLCAQSHTCTLAFELLLADPLQFFRVEVALHDINDHSPVFPAERVTLKIPETSDPGSRFPLEGARDLDIGSNSVQTYSISPKNQYFSVSYGSRSDDDKYVELVLEKPLDREEQAEIKFSLIAVDGGSPPRSGTTQIHIIILDANDNSPVFTEEVYLARILENTPEGSVVLTVLATDQDEGINGDISYQFGEAVSQSDSAFEIDPITGEIKLTKPLDFEAAETHELRVRATDGGGLSAICKVLVQVLDVNDNAPELEVSSFSSPLPENSAPGTVVALFTVRDRDAGANGKVSCALDDQLVFSLRPAYKNYYELVTVSALDREETAQYMLTVTAADAGSPPLTSSHTFTVAISDVNDNAPVFSQTSYTMYVRENNVPGVLVGAVSAADADLGLNAKVSYSLSAGQAAERPWCSCLSVNSENGQVFVLRALDYEQLRQSEVVVSASDAGSPPLRANVTVRLLVLDENDNAPLVLYPAHDSGPASSELVPVSAEAGYLVSKVVAVDADSGQNSWLSYHLLRATDPGLFAVAAQSGEVRLRRPLTDRDSVKHKLVVLVRDNGRPPLSATAALSALLLKDFSDLRQPHSSPATDDQPGSLTTYLILALVFVSLLFLGSTAAFVARRLCKRKELKAGHVLYGADNLPSGLAEAAAAGTLPHPYCYEISLTTGSANSDFKFLKPFVPSLTPQPCAVAGGPSEEQVFPCVPVPTEDVTPHDAGTVSAEQFNRLSFN
SIO_010081: LOC116794269
subclass of: SO_0000673
so part of: LOC116794269
location: complement(2883482..2885923)
location: region:2883482-2885923:-1
so has part: feature:2883482-2885923:-1:exon

XP_032558706.1
type: Protein
SIO_000068: ncbiprotein

position:2883482:-1
position: 2883482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2885923:-1
position: 2885923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2883482-2885923:-1:exon

LOC116794264
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794264
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2888034..2899582)
location: region:2888034-2899582:-1
so has part: feature:2888034-2899582:-1:exon
subclass of: SO_0000010

116794264
type: Gene
SIO_000068: ncbigene

position:2888034:-1
position: 2888034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2899582:-1
position: 2899582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2888034-2899582:-1:exon

LOC116794264
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794264
product: protocadherin beta-15-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 81 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032702809.1
SIO_010081: LOC116794264
subclass of: SO_0000673
so part of: LOC116794264
location: complement(join(2888034..2888546,2897086..2899582))
location: region:2888034-2899582:-1
so has part: feature:2897086-2899582:-1:exon
so has part: feature:2888034-2888546:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2897086-2899582:-1:exon

position:2897086:-1
position: 2897086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2888034-2888546:-1:exon

position:2888546:-1
position: 2888546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116794264
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794264
product: protocadherin beta-15-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 174 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032702808.1
SIO_010081: LOC116794264
subclass of: SO_0000673
so part of: LOC116794264
location: complement(join(2888049..2888095,2896635..2899582))
location: region:2888049-2899582:-1
so has part: feature:2896635-2899582:-1:exon
so has part: feature:2888049-2888095:-1:exon

position:2888049:-1
position: 2888049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2896635-2899582:-1:exon

position:2896635:-1
position: 2896635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2888049-2888095:-1:exon

position:2888095:-1
position: 2888095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116794264
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794264
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-15-like isoform X2
translation: MGARPAPGSAAGERRHRACARVSVGRAERQRGQRAAAGAVPARTAGWWSRLRRRRARPSPAQHSQAQPSSQQPSRAERAAPAAATAGSASRAWDTAPALRAAEPTGIQREKKGTLPLPLSAGTTREIREKEIGHRRRRRRRRRAMAMARQVLCVCALLSVPLARSQPIRYSVAEEADSGSLVGNLEQDAALPPAQLSARRARLLPEDGRQHFRLDRDSGRLVVADRLDREQLCAQSHTCTLAFELLLADPLQFFRVEVTLHDINDHSPVFPEERVTFDILETSDPGSRFPLEVAWDLDIGSNSIQTYSISPENEHFSISYGSRSNGDKYVELVLEKPLDREEQAEMDFSVIAVDGGSPPRSGTTQIHITVLDVNDNAPVFTQDRYTVQVLENAPKGSVVLTVLATDRDAGVSGDISYQFRQAVGQSDSAFEIDSITGEIKLTKPLDFEAAEHHELSVRARDGGGLSAICKVLVEVLDVNDNAPELEVSSFSSPLAENSAPGTVVALFTVRDRDAGANGKVSCALDDQLVFSLRPAYKNYYELVTVSALDREETAQYMLTVTAADAGSPPLTSSHTFTVAISDVNDNAPVFSQTSYTMYVRENNVPGVLVGAVSAADADVGLNAKVSYSLSAGQAAERPWCSCLSVNSENGQVFVLRALDYEQLRQSEVVVSASDAGSPPLRANVTVRLLVLDENDNAPLVLYPAHDSGPASSELVPVSAEAGYLVSKVVAVDADSGQNSWLSYHLLRATDPGLFAVAAQSGEVRLRRPLTDRDSVKHKLVVLVRDNGRPPLSATAALSALLLKDFSDLRQPHSSPDTDDQPGSLTTYLILALVFVSLLFLGSTAAFVARRLCKRKELKAGHVLYGVDNLPSGLAEAAAAGTLPHPYCYEISLTTGSANSDFKFLKPFVPSLTPQPCAMAGGPSEEQVFPCVPVPTEDVTPDDAGTVSAEQFNRLSFN
SIO_010081: LOC116794264
subclass of: SO_0000673
so part of: LOC116794264
location: complement(join(2888118..2888546,2897086..2899530))
location: region:2888118-2899530:-1
so has part: feature:2897086-2899530:-1:exon
so has part: feature:2888118-2888546:-1:exon

XP_032558700.1
type: Protein
SIO_000068: ncbiprotein

position:2888118:-1
position: 2888118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2899530:-1
position: 2899530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2897086-2899530:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2888118-2888546:-1:exon

LOC116794267
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794267
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2890180..2893028)
location: region:2890180-2893028:-1
so has part: feature:2890180-2893028:-1:exon
subclass of: SO_0000010

116794267
type: Gene
SIO_000068: ncbigene

position:2890180:-1
position: 2890180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2893028:-1
position: 2893028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2890180-2893028:-1:exon

LOC116794267
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794267
product: protocadherin beta-15-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 162 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032702813.1
SIO_010081: LOC116794267
subclass of: SO_0000673
so part of: LOC116794267
location: complement(2890180..2893028)
location: region:2890180-2893028:-1
so has part: feature:2890180-2893028:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2890180-2893028:-1:exon

LOC116794267
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794267
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-15-like
translation: MAMARQVLCVCALLSVPLARSQPIRYSVAEEADSGSLVGNLAQDAALPPAQLSARRARLLPEDGRQHFRLDRDSGRLVVADRLDREQLCAQSHTCTLAFELLLADPLQFFRVEVTLQDINDHSPVFPAERVTFKIPEASGPGSRFPLEAARDLDIGNNGIQAYSISPENGYFSVSYDSQSEDDKFIDLVLEKPLDREEQAEMHFSLIAVDGGSPPRTGTTQIHILILDANDNSPVFTQKVYTGQVLENAPDGSVVLTVLATDRDAGINGDISYQFSHTMGQRESLFEIDPITGEIKLLKSLDFETAEHHELHVRATDGGGLSAVCKVLVEVLDMNDNAPELEVSSFSSPLAENSAPGTVVALFTVRDRDAGANGKVSCALDDQLVFSLRPAYKNYYELVTVSALDREETAQYMLTVTAADAGSPPLTSSHTFTVAISDVNDNAPVFNQTSYTMYVRENNVPGVLVGAVSAADADVGLNAKVSYSLSAGQAAERPWCSCLSVNSENGQVFVLRALDYEQLRQSEVVVSASDAGSPPLRANVTVRLLVLDENDNAPLVLYPAHDSGPASSELVPVSAEAGYLVSKVVAVDADSGQNSWLSYHLLRATDPGLFAVAAQSGEVRLRRPLTDRDSVKHKLVVLVRDNGRPPLSATAALSALLLKDFSDLRQPHSSLATDDQPGSLTTYLILALVFVSLLFLGSTAAFVARGLCKRKELKAGHVLYGADNLPSGLAEAAAAGTLPHPYCYEISLTTGSANSDCKFLKPFVPSLTPQPCTMAGGPSEEQVFPCVPVPTEDVTPDDAGTVSAEQFNRLSFN
SIO_010081: LOC116794267
subclass of: SO_0000673
so part of: LOC116794267
location: complement(2890213..2892654)
location: region:2890213-2892654:-1
so has part: feature:2890213-2892654:-1:exon

XP_032558704.1
type: Protein
SIO_000068: ncbiprotein

position:2890213:-1
position: 2890213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2892654:-1
position: 2892654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2890213-2892654:-1:exon

LOC116794264
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794264
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-15-like isoform X1
translation: MGARPAPGSAAGERRHRACARVSVGRAERQRGQRAAAGAVPARTAGWWSRLRRRRARPSPAQHSQAQPSSQQPSRAERAAPAAATAGSASRAWDTAPALRAAEPTGIQREKKGTLPLPLSAGTTREIREKEIGHRRRRRRRRRAMAMARQVLCVCALLSVPLARSQPIRYSVAEEADSGSLVGNLEQDAALPPAQLSARRARLLPEDGRQHFRLDRDSGRLVVADRLDREQLCAQSHTCTLAFELLLADPLQFFRVEVTLHDINDHSPVFPEERVTFDILETSDPGSRFPLEVAWDLDIGSNSIQTYSISPENEHFSISYGSRSNGDKYVELVLEKPLDREEQAEMDFSVIAVDGGSPPRSGTTQIHITVLDVNDNAPVFTQDRYTVQVLENAPKGSVVLTVLATDRDAGVSGDISYQFRQAVGQSDSAFEIDSITGEIKLTKPLDFEAAEHHELSVRARDGGGLSAICKVLVEVLDVNDNAPELEVSSFSSPLAENSAPGTVVALFTVRDRDAGANGKVSCALDDQLVFSLRPAYKNYYELVTVSALDREETAQYMLTVTAADAGSPPLTSSHTFTVAISDVNDNAPVFSQTSYTMYVRENNVPGVLVGAVSAADADVGLNAKVSYSLSAGQAAERPWCSCLSVNSENGQVFVLRALDYEQLRQSEVVVSASDAGSPPLRANVTVRLLVLDENDNAPLVLYPAHDSGPASSELVPVSAEAGYLVSKVVAVDADSGQNSWLSYHLLRATDPGLFAVAAQSGEVRLRRPLTDRDSVKHKLVVLVRDNGRPPLSATAALSALLLKDFSDLRQPHSSPATDDQPGSLTTYLILALVFVSLLFLGSTAAFVARRLCKRKELKAGHVLYGADNLPSGLAEAAAAGTLPHPYCYEISLTTGSANSDFKFLKPFVPSLTPQPCAMAGGPSEEQVFPCVPVPTEDVTPDDAGTVSAEQFNRLSFN
SIO_010081: LOC116794264
subclass of: SO_0000673
so part of: LOC116794264
location: complement(2896657..2899530)
location: region:2896657-2899530:-1
so has part: feature:2896657-2899530:-1:exon

XP_032558699.1
type: Protein
SIO_000068: ncbiprotein

position:2896657:-1
position: 2896657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2896657-2899530:-1:exon

LOC116794276
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2905416..2907941)
location: region:2905416-2907941:-1
so has part: feature:2905416-2907941:-1:exon
subclass of: SO_0000010

116794276
type: Gene
SIO_000068: ncbigene

position:2905416:-1
position: 2905416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2907941:-1
position: 2907941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2905416-2907941:-1:exon

LOC116794276
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794276
product: protocadherin beta-15-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 191 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032702822.1
SIO_010081: LOC116794276
subclass of: SO_0000673
so part of: LOC116794276
location: complement(2905416..2907941)
location: region:2905416-2907941:-1
so has part: feature:2905416-2907941:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2905416-2907941:-1:exon

LOC116794276
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-15-like
translation: MAMARQVLCVCALLSVPLARSQPIRYSVAEEADSGSLVGNLAQDAALPPAQLSARRARLLPEDGRQHFRLDRDSGRLVVADRLDREQLCAQSHTCTLAFELLLADPLQFFRVEVALQDINDHSPVFPEERVILKILETSDPGSRFPLEVAQDLDIGSNSIQAYSIAPENEYFRVSYGSRNNGDKYVELVLEKPLDREEQAEMHFSVIAVDGGSPPRSGTTQIHITVLDVNDNAPVFTQDRYTVQVLENAPKGSVVLTVLATDQDEGTNGDISYQFRQAVGQSDSAFEIDSTTGEIKLTKTLDFEAAETHELSVRATDGGGLSAICKVLVEVLDVNDNAPELEVSSFSSPLPENSAPGTVVALFTVRDRDAGANGKVSCALDDQLVFSLRPAYKNYYELVTVSALDREETAQYMLTVTAADAGSPPLTSSHTFTVAISDVNDNAPVFNQTSYTMYVRENNVPGVLVGAVSAADADVGLNAKVSYSLSAGQAAERPWCSCLSVNSENGQVFVLRGLDYEQLRQSEVVVSASDAGSPPLRANVTVRLLVLDENDNAPLVLYPAHDSGPASSELVPVSAEAGYLVSKVVAVDADSGQNSWLSYHLLRATDPGLFAVAAQSGEVRLRRPLTDRDSVKHKLVVLVRDNGRPPLSATAALSALLLKDFSDLRQPHSSPATDDQPGSLTTYLILALVFVSLLFLGSTAAFVARRLCKRKELKAGHVLYGADNLPSGLAEAAAAGTLPHPYCYEISLTTGSANSDFKFLKPFVPSLAPQPCTMAGGPSEEQVFPCVPVPTEDVTPHDAGTVSAEQFNRLSFN
SIO_010081: LOC116794276
subclass of: SO_0000673
so part of: LOC116794276
location: complement(2905464..2907905)
location: region:2905464-2907905:-1
so has part: feature:2905464-2907905:-1:exon

XP_032558713.1
type: Protein
SIO_000068: ncbiprotein

position:2905464:-1
position: 2905464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2907905:-1
position: 2907905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2905464-2907905:-1:exon

LOC116794275
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794275
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2911963..2914491)
location: region:2911963-2914491:-1
so has part: feature:2911963-2914491:-1:exon
subclass of: SO_0000010

116794275
type: Gene
SIO_000068: ncbigene

position:2911963:-1
position: 2911963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2914491:-1
position: 2914491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2911963-2914491:-1:exon

LOC116794275
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794275
product: protocadherin beta-15-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 195 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032702820.1
SIO_010081: LOC116794275
subclass of: SO_0000673
so part of: LOC116794275
location: complement(2911963..2914491)
location: region:2911963-2914491:-1
so has part: feature:2911963-2914491:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2911963-2914491:-1:exon

LOC116794275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794275
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-15-like
translation: MAMARQVLCVCALLSVPLARSQPIRYSVAEEADSGSLVGNLAQDAALPPAQLSARRARLLPEDGRQHFRLDRDSGRLVVADRLDREQLCAQSHTCTLAFELLLADPLQFFRVEVALQDINDHSPVFPEERVTFKIPETSDPGSRFPLEVAQDLDIGSNSVQAYSISPENEYFSVSYGNLIRGKKSVELVLEKPLDREEQAEMDFSLIAVDGGSPPRTGTTQIHITVLDVNDNAPVFTQEVYDVQVLENAPKGSVVLTVLATDRDAGVNGEISYQFRQVVSPRDSVFEIDPITGEIKLTKPLDFEVAEIHELSVRATDGGGLSAICRVLVEVLDVNDNAPELEVSSFSSPLPENSAPGTVVALFTVRDRDAGANGKVSCALNDQLVFSLRPAYKNYYELVTVSALDREETAQYMLTVTAADAGSPPLTSSHTFTVAISDVNDNAPVFSQTSYTMYVRENNVPGVLVGAVSAADADLGLNAKVSYSLSAGQAAERPWCSCLSVNSENGQVFVLRALDYEQLRQSEVVVSASDAGSPPLRANVTVRLLVLDENDNAPLVLYPAHDSGPASSELVPVSAEAGYLVSKVVAVDADSGQNSWLSYHLLRATDPGLFAVAAQSGEVRLRRPLTDRDSVKHKLVVLVRDNGRPPLSATAALSALLLKDFSDLRQPHSSPATDDQPGSLTTYLILALVFVSLLFLGSTAAFVARRLCKRKELKTGHVLYGADNLPSGLAEAAAAGTLPHPYCYEISLTTGSANSDFKFLKPFVPSLTPQPCTMAGGPSEEQVFPCVPVPTEDVTPDDAGTVSAEQFNRLSFN
SIO_010081: LOC116794275
subclass of: SO_0000673
so part of: LOC116794275
location: complement(2912044..2914485)
location: region:2912044-2914485:-1
so has part: feature:2912044-2914485:-1:exon

XP_032558711.1
type: Protein
SIO_000068: ncbiprotein

position:2912044:-1
position: 2912044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2914485:-1
position: 2914485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2912044-2914485:-1:exon

LOC116794274
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794274
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2915786..2921064)
location: region:2915786-2921064:-1
so has part: feature:2915786-2921064:-1:exon
subclass of: SO_0000010

116794274
type: Gene
SIO_000068: ncbigene

position:2915786:-1
position: 2915786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2921064:-1
position: 2921064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2915786-2921064:-1:exon

LOC116794274
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794274
product: protocadherin beta-15-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 174 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032702819.1
SIO_010081: LOC116794274
subclass of: SO_0000673
so part of: LOC116794274
location: complement(join(2915786..2916595,2918530..2921064))
location: region:2915786-2921064:-1
so has part: feature:2918530-2921064:-1:exon
so has part: feature:2915786-2916595:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2918530-2921064:-1:exon

position:2918530:-1
position: 2918530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2915786-2916595:-1:exon

position:2916595:-1
position: 2916595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116794274
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794274
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-15-like
translation: MAMARQVLCVCALLSVPLARSQPIRYSVAEEADSGSLVGNLAQDAALPPAQLSARRARLLPEDGRQHFRLDRDSGRLVVADRLDREQLCAQSHTCTLAFELLLADPLQFFRVEVALQDINDHSPVFPAERVTFEIPEKSDPGSRFPLEVARDLDIGSNSIQTYNISPENDYFSVSFASRSNGYKYVELVLEKPLDREEQVEMHFSLIAVDGGSPPRSGSTQVHIVVLDVNDNAPVFTQDSYTVQVLENAPEGSVVLNVWATDQDAGVYGEISYHFSEAVSQSDSAFEIDSTSGEIKLTKPLDFEVAETHELSVRAKDGGGLSAICKVLVQVLDVNDNAPELEVSSFSSPLPENSAPGTVVALFTVRDRDAGANGKVSCALDDQLVFSLRPAYKNYYELVTVSALDREETAQYMLTVTAADAGSPPLTSSHTFTVAISDVNDNAPVFSQTSYTMYVRENNVPGVLVGAVSAADADVGLNAKVSYSLSAGQAAERPWCSCLSVNSENGQVFVLRGLDYEQLRQSEVVVSASDAGSPPLRANVTVRLLVLDENDNAPLVLYPAHDSGPASSELVPVSAEAGYLVSKVVAVDADSGQNSWLSYHLLRATDPGLFAVAAQSGEVRLRRPLTDRDSVKHKLVVLVRDNGRPPLSATAALSALLLKDFSDLRQPHSSPATDDQPGSLTTYLILALVFVSLLFLGSTAAFVARGLCKRKELKAGHVLYGADNLPSGLAEAAAAGTLPHPYCYEISLTTGSANSEFKFLKPFVPSLTPQPCAMAGGPSEEQVFPCVPVPTEDVTPDDAGTVSAEQFNRLSFN
SIO_010081: LOC116794274
subclass of: SO_0000673
so part of: LOC116794274
location: complement(2918617..2921058)
location: region:2918617-2921058:-1
so has part: feature:2918617-2921058:-1:exon

XP_032558710.1
type: Protein
SIO_000068: ncbiprotein

position:2918617:-1
position: 2918617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2921058:-1
position: 2921058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2918617-2921058:-1:exon

LOC116794266
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794266
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2923742..2926301)
location: region:2923742-2926301:-1
so has part: feature:2923742-2926301:-1:exon
subclass of: SO_0000010

116794266
type: Gene
SIO_000068: ncbigene

position:2923742:-1
position: 2923742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2926301:-1
position: 2926301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2923742-2926301:-1:exon

LOC116794266
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794266
product: protocadherin beta-15-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032702812.1
SIO_010081: LOC116794266
subclass of: SO_0000673
so part of: LOC116794266
location: complement(2923742..2926301)
location: region:2923742-2926301:-1
so has part: feature:2923742-2926301:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2923742-2926301:-1:exon

LOC116794266
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794266
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-15-like
translation: MAMARQVLCVCALLSVPLARSQPIRYSVAEEADSGSLVGNLAQDAALPPAQLSARRARLLPEDGRQHFRLDRDSGRLVVADRLDREQLCAQSHTCTLAFELLLADPLQFFRVEVTLHDINDHSPVFPEDRVAFKIPETSDPGSRFPLDAARDLDIGSNSIQAYSISPENQYFSVFSGTRSDDDKYVELVLEKPLDREEQAEMDFSLIAVDGGSPPRSGTTQIHIIILDANDNSPVFTQEVYRARVLENMPEGSVVLTVLATDQDEGINGDISYQFRQAVDQKDPAFEIDPITGEIKLTKPLDFEAAEHHELRVRATDGGGLSAICKVLVEVLDVNDNAPELEVSSFSSPLPENSEPGTVVALFTVRDRDAGANGKVSCALDDQLVFSLRPAYKNYYELVTVSALDREETAQYMLTVTAADAGSPPLTSSHTFTVAISDVNDNAPVFNQTSYTMYVRENNVPGVLVGAVSAADADVGLNAKVSYSLSAGQAAERPWCSCLSVNSENGQVFVLRGLDYEQLRQSEVVVSASDAGSPPLRANVTVRLLVLDENDNAPLVLYPAHDSGPASSELVPVSAEAGYLVSKVVAVDADSGQNSWLSYHLLRATDPGLFAVAAQSGEVRLRRPLTDRDSVKHKLVVLVRDNGRPPLSATAALSALLLKDFSDLRQPHSSPATDDQPGSLTTYLILALVFVSLLFLGSTAAFVARGLCKRKELKAGHVLYGADNLPSGLAEAAAAGTLPHPYCYEISLTTGSANSDFKFLKPFVPSLTPQPCAMAGGPSEEQVFPCVPVPTEDVTPDDAGTVSAEQFNRLSFN
SIO_010081: LOC116794266
subclass of: SO_0000673
so part of: LOC116794266
location: complement(2923783..2926224)
location: region:2923783-2926224:-1
so has part: feature:2923783-2926224:-1:exon

XP_032558703.1
type: Protein
SIO_000068: ncbiprotein

position:2923783:-1
position: 2923783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2926224:-1
position: 2926224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2923783-2926224:-1:exon

LOC116794273
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794273
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2930369..2932844)
location: region:2930369-2932844:-1
so has part: feature:2930369-2932844:-1:exon
subclass of: SO_0000010

116794273
type: Gene
SIO_000068: ncbigene

position:2930369:-1
position: 2930369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2932844:-1
position: 2932844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2930369-2932844:-1:exon

LOC116794273
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794273
product: protocadherin beta-15-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 135 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032702818.1
SIO_010081: LOC116794273
subclass of: SO_0000673
so part of: LOC116794273
location: complement(2930369..2932844)
location: region:2930369-2932844:-1
so has part: feature:2930369-2932844:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2930369-2932844:-1:exon

LOC116794273
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794273
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-15-like
translation: MAMARQVLCVCALLSVPLARSQPIRYSVAEEADSGSLVGNLAQDAALPPAQLSARRARLLPEDGRQHFRLDRDSGRLVVADRLDREQLCAQSHTCTLAFELLLADPLQFFRVEVTLQDINDHSPVFPAERVILKILETSDPGSRFPLQGARDFDIGSNSIQAYSIAPENEYFSVSYESRFAGKKSIELVLEKPLDREEQAEMDFRLIAVDGGSPPRTGSTQVHIVVLDVNDNPPIFTQEEYIGKVLENASTGSVVLSVLATDRDEGINGDISYQFSEEVGQSDSAFEIDPITGEIKLTKPLDFEAAQTHELSVSAADGSGLSAICKVLVQVLDVNDNAPELEVSSFSSPLPENSAPGTVVALFTVRDRDAGANGKVSCALDDQLVFSLRPAYKNYYELVTVSALDREETAQYMLTVTAADAGSPPLTSSHTFTVAISDVNDNAPVFSQTSYTMYVRENNVPGVLVGAVSAADADVGLNAKVSYSLSAGQAAERPWCSCLSVNSENGQVFVLRGLDYEQLRQSEVVVSASDAGSPPLRANVTVRLLVLDENDNAPLVLYPAHDSGPASSELVPVSAEAGYLVSKVVAVDADSGQNSWLSYHLLRATDPGLFAVAAQSGEVRLRRPLTDRDSVKHKLVVLVRDNGRPPLSATAALSALLLKDFSDLRQPHSSPATDDQPGSLTTYLILALLFVSLLFLGSTAAFVARGLCKRKELKAGHVLYGADNLPSGLAEAAAAGTLPHPYCYEISLTTGSANSEFKFLKPFVPSLTPQPCAVAGGPSEEQVFPCVPVPAEDVTPDDAGTVSAEQFNRLSFN
SIO_010081: LOC116794273
subclass of: SO_0000673
so part of: LOC116794273
location: complement(2930369..2932810)
location: region:2930369-2932810:-1
so has part: feature:2930369-2932810:-1:exon

XP_032558709.1
type: Protein
SIO_000068: ncbiprotein

position:2932810:-1
position: 2932810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2930369-2932810:-1:exon

LOC116794270
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794270
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2934180..2950992)
location: region:2934180-2950992:-1
so has part: feature:2934180-2950992:-1:exon
subclass of: SO_0000010

116794270
type: Gene
SIO_000068: ncbigene

position:2934180:-1
position: 2934180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2950992:-1
position: 2950992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2934180-2950992:-1:exon

LOC116794270
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 296741
gene: LOC116794270
product: protocadherin beta-15-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 160 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004359742.1
SIO_010081: LOC116794270
so part of: LOC116794270
location: complement(join(2934180..2934193,2940882..2941674,2948420..2950992))
location: region:2934180-2950992:-1
so has part: feature:2948420-2950992:-1:exon
so has part: feature:2940882-2941674:-1:exon
so has part: feature:2934180-2934193:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2948420-2950992:-1:exon

position:2948420:-1
position: 2948420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2940882-2941674:-1:exon

position:2940882:-1
position: 2940882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2941674:-1
position: 2941674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2934180-2934193:-1:exon

position:2934193:-1
position: 2934193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116794270
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794270
product: protocadherin beta-15-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 160 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032702816.1
SIO_010081: LOC116794270
subclass of: SO_0000673
so part of: LOC116794270
location: complement(join(2935878..2936034,2948381..2950992))
location: region:2935878-2950992:-1
so has part: feature:2948381-2950992:-1:exon
so has part: feature:2935878-2936034:-1:exon

position:2935878:-1
position: 2935878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2948381-2950992:-1:exon

position:2948381:-1
position: 2948381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2935878-2936034:-1:exon

position:2936034:-1
position: 2936034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116794271
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794271
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2936854..2939839)
location: region:2936854-2939839:-1
so has part: feature:2936854-2939839:-1:exon
subclass of: SO_0000010

116794271
type: Gene
SIO_000068: ncbigene

position:2936854:-1
position: 2936854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2939839:-1
position: 2939839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2936854-2939839:-1:exon

LOC116794271
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794271
product: protocadherin beta-15-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 190 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032702817.1
SIO_010081: LOC116794271
subclass of: SO_0000673
so part of: LOC116794271
location: complement(2936854..2939839)
location: region:2936854-2939839:-1
so has part: feature:2936854-2939839:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2936854-2939839:-1:exon

LOC116794271
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794271
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-15-like
translation: MAMARQVLCVCALLSVPLARSQPIRYSVAEEADSGSLVGNLAQDAALPPAQLSARRARLLPEDGRQHFRLDRDSGRLVVADRLDREQLCAQSHTCTLAFELLLADPLQFFRVEVALQDINDHSPVFPAERVTLKILETSDPGSRFPLEVARDLDIGSNSVQAYSISPENEYFSVSYGSRIRGKKYVELVLENPLDREEQAEMDFSLIAVDGGSPPRSGTTQIHITVLDVNDNAPVFTQEVYDVQVFENAPKGSVVFTVLAADRDSGINGDISYQFSEAVSQSESAFEIDPITGEIKLTKPLDFETAETHELSVRATDGGGLSAICKVLVQVLDVNDNAPELEVSSFSSPLPENSAPGTVVALFTVRDRDAGANGKVSCALDDQLVFSLRPAYKNYYELVTVSALDREETAQYMLTVTAADAGSPPLTSSHTFTVAISDVNDNAPVFSQTSYTMYVRENNVPGVLVGAVSAADADVGLNAKVSYSLSAGQAAERPRCSCLSVNSENGQVFVLRGLDYEQLRQSEVVVSASDAGSPPLRANVTVRLLVLDENDNAPLVLYPAHDSGPASSELVPVSAEAGYLVSKVVAVDADSGQNSWLSYHLLRATDPGLFAVAAQSGEVRLRRPLTDRDSVKHKLVVLVRDNGRPPLSATAALSALLLKDFSDLRQPHSSPATDDQPGSLTTYLILALLFVSLLFLGSTAAFVARGLCKRKELKAGHVLYGANNLPSGLAEAAAAGTLPHPYCYEISLTTGSANSDFKFLKPFVPSLTPQPCAMAGGPSEEQVFPCVPVPTEDVTPDDAGTASAEQFNRLSFN
SIO_010081: LOC116794271
subclass of: SO_0000673
so part of: LOC116794271
location: complement(2937030..2939471)
location: region:2937030-2939471:-1
so has part: feature:2937030-2939471:-1:exon

XP_032558708.1
type: Protein
SIO_000068: ncbiprotein

position:2937030:-1
position: 2937030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2939471:-1
position: 2939471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2937030-2939471:-1:exon

LOC116794268
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794268
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2943079..2946051)
location: region:2943079-2946051:-1
so has part: feature:2943079-2946051:-1:exon
subclass of: SO_0000010

116794268
type: Gene
SIO_000068: ncbigene

position:2943079:-1
position: 2943079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2946051:-1
position: 2946051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2943079-2946051:-1:exon

LOC116794268
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794268
product: protocadherin beta-15-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 168 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032702814.1
SIO_010081: LOC116794268
subclass of: SO_0000673
so part of: LOC116794268
location: complement(2943079..2946051)
location: region:2943079-2946051:-1
so has part: feature:2943079-2946051:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2943079-2946051:-1:exon

LOC116794268
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794268
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-15-like
translation: MAMARQVLCVCALLSVPLARSQPIRYSVAEEADSGSLVGNLAQDAALPPAQLSARRARLLPEDGRQHFRLDRDSGRLVVADRLDREQLCAQSHTCTLAFELLLADPLQFFRVEVTLHDINDHSPVFPTERVTFKIPEKTDPGSRFPLELARDLDIGSNSIQAYSIAPENGYFSVSFDSQSEDGKYVELVLEKPLDREEQAEMHFSLIAVDGGSPARSGTTQIHIIILDVNDNSPVFTQKMYVGQVLENAPKGSVVLTVLATDQDEGTNGDISYQFSQAVSQSESAFEIDHITGEIKLRKPLDFEAAEHHELSVRATDGGGLSAICKVLVQVLDVNDNAPELEVSSFSSPLPENSAPGTVVALFTVRDRDAGANGKVSCALDDQLVFSLRPAYKNYYELVTVSALDREETAQYMLTVTAADAGSPPLTSSHTFTVAISDVNDNAPVFSQTSYTMYVRENNVPGVLVGAVSAADADVGLNAKVSYSLSAGQAAERPRCSCLSVNSENGQVFVLRGLDYEQLRQSEVVVSASDAGSPPLRANVTVRLLVLDENDNAPLVLYPAHDSGPASSELVPVSAEAGYLVSKVVAVDADSGQNSWLSYHLLRATDPGLFAVAAQSGEVRLRRPLTDRDSVKHKLVVLVRDNGRPPLSATAALSALLLKDFSDLRQPHSSPATDDQPGSLTTYLILALLFVSLLFLGSTAAFVARGLCKRKELKAGHVLYGADNLPSGLAEAAAAGTLPHPYCYEISLTTGSANSDFKFLKPFVPSLTPQPCAMAGGPSEEQVFPCVPVPTEDVTPHDAGTVSAEQFNRLSFN
SIO_010081: LOC116794268
subclass of: SO_0000673
so part of: LOC116794268
location: complement(2943262..2945703)
location: region:2943262-2945703:-1
so has part: feature:2943262-2945703:-1:exon

XP_032558705.1
type: Protein
SIO_000068: ncbiprotein

position:2943262:-1
position: 2943262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2945703:-1
position: 2945703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2943262-2945703:-1:exon

LOC116794270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794270
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-15-like
translation: MAMARQVLCVCALLSVPLARSQPIRYSVAEEADSGSLVGNLAQDAALPPAQLSARRARLLPEDGRQHFRLDRDSGRLVVADRLDREQLCAQSHTCTLAFELLLADPLQFFRVEVALQDINDHSPVFPAERVTFKIPETSEPGSRFPLERAWDLDIGSNSIQAYNISPENQYFSVSYGSLIRGKKSVELVLENPLDREEQAEMHFSLIAVDGGSPPRSGTTQIHIVILDANDNAPVFTQEVYDVQVLENAPKGSVVLTVLATDRDVGVNGDISYQFSEVVSQRDSAFEIDPITGEIKLTKPLDFEAAETHELSVRATDGGGLSAICRVLVQVLDVNDNAPELEVSSFSSPLPENSAPGTVVALFTVRDRDAGANGKVSCALDDQLVFSLRPAYKNYYELVTVSALDREETAQYMLTVTAADAGSPPLTSSHTFTVAISDVNDNAPVFSQTSYTMYVRENNVPGVLVGAVSAADADVGLNAKVSYSLSAGQAAERPRCSCLSVNSENGQVFVLRGLDYEQLRQSEVVVSASDAGSPPLRANVTVRLLVLDENDNAPLVLYPAHDSGPASSELVPVSAEAGYLVSKVVAVDADSGQNSWLSYHLLRATDPGLFAVAAQSGEVRLRRPLTDRDSVKHKLVVLVRDNGRPPLSATAALSALLLKDFSDLRQPHSSPATDDQPGSLTTYLILALLFVSLLFLGSTAAFVARRLCKRKELKAGHVLYGADNLPSGLAEAAAAGTLPHPYCYEISLTTGSANSDFKFLKPFVPSLTPQPCAVAGGPSEEQVFPCVPVPTEDVTPDDAGSVSAEQFNRLSFN
SIO_010081: LOC116794270
subclass of: SO_0000673
so part of: LOC116794270
location: complement(2948426..2950867)
location: region:2948426-2950867:-1
so has part: feature:2948426-2950867:-1:exon

XP_032558707.1
type: Protein
SIO_000068: ncbiprotein

position:2948426:-1
position: 2948426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2950867:-1
position: 2950867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2948426-2950867:-1:exon

LOC116794265
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794265
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2951127..2954174)
location: region:2951127-2954174:-1
so has part: feature:2951127-2954174:-1:exon
subclass of: SO_0000010

116794265
type: Gene
SIO_000068: ncbigene

position:2951127:-1
position: 2951127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2954174:-1
position: 2954174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2951127-2954174:-1:exon

LOC116794265
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794265
product: protocadherin beta-16-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 182 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032702811.1
SIO_010081: LOC116794265
subclass of: SO_0000673
so part of: LOC116794265
location: complement(2951127..2954174)
location: region:2951127-2954174:-1
so has part: feature:2951127-2954174:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2951127-2954174:-1:exon

LOC116794265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794265
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-16-like
translation: MKLRKSEEPLPGRAVALFLLLCVSGMRAEIARYSVPEEVERGSFVVNIAKDLGLTAEELSARQARLVPDGEKQYLQLNQRTGDLVVREQMDREELCGQSEPCLVRFEVLLENPLQSFRAEVRLTDINDHAPVFLNKEIVLKIPESAMPETRFLLESAQDPDVGNNSLQHYSISSNEYFHVYTRRRNDGRRYAELVLDRALDREQEAEVAFSITAVDGGTPPRSGSALIRVVVLDINDNIPVFTRSLYKVPIRENSSQDTLVVVVSASDLDSGTNGEIAYSIVQNSKENFETFKINPGTGQIRLKKPLDYEETKTYEIDVQATDGGGLSAHCKVEVQVEDVNDNAPEVIITSLTSTLSEAAPPNTVVALFNVRDRDSGDNGRTTCELAGEQPFGISLLGADAYALVTSEALDREEVAEYNVTVRARDQGSPALSTCKTLLVRLLDVNDNAPTFIQDIYTMVMSENEPAGTSLGRLRATDADAGENAHVRYAIEAPPLGTPAAASFVSVDAESGTVRTLRPLDYEKVRAFELVVRATDGGSPPLSAQAVLRIVVQDQNDNAPVVLHPSPDSSAAGELVPRWAPSGYLVAKVVAVDADAGQNAWLSYELAKATEPGLFRVGLHSGEVRTARAVTERDAPRQRLVVLVRDRGHPPRSATTTLAVALVHDFSDASMQLDHDPASRQQLQVAEEDLLTTYLIASLGCVSSLFLLSVVALATTKLCKARLRAHLSPPSANCYADGDFASDGVDVGGMGTLSPAYRYEVCLTTGSGRSEFQFLRPVLLSPQSSAETGPDKDEDPLCSSQPAGEREACAGSTAASPFQPPDWPVGGRVHA
SIO_010081: LOC116794265
subclass of: SO_0000673
so part of: LOC116794265
location: complement(2951679..2954174)
location: region:2951679-2954174:-1
so has part: feature:2951679-2954174:-1:exon

XP_032558702.1
type: Protein
SIO_000068: ncbiprotein

position:2951679:-1
position: 2951679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2951679-2954174:-1:exon

LOC116794529
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794529
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2954998..2960041)
location: region:2954998-2960041:-1
so has part: feature:2954998-2960041:-1:exon
subclass of: SO_0000010

116794529
type: Gene
SIO_000068: ncbigene

position:2954998:-1
position: 2954998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2960041:-1
position: 2960041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2954998-2960041:-1:exon

LOC116794529
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794529
product: protocadherin beta-16-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 195 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032703260.1
SIO_010081: LOC116794529
subclass of: SO_0000673
so part of: LOC116794529
location: complement(join(2954998..2955971,2957401..2960041))
location: region:2954998-2960041:-1
so has part: feature:2957401-2960041:-1:exon
so has part: feature:2954998-2955971:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2957401-2960041:-1:exon

position:2957401:-1
position: 2957401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2954998-2955971:-1:exon

position:2955971:-1
position: 2955971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116794529
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794529
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-16-like
translation: MLGAAEDGGCLFRRLMACGRRSGDSKRQVILFILCFCVCQSGAETLRYSLPEEMERDSFVANIAKDLGVPVSQLAARKARVVSEGSEQLFRLDQNTGVLTAKESLDREEICPQRDTCTLVFKIFFENPLQLIRGEVEIRDVNDNSPVFPEKEMVLKILETASPGSRFPLESAQDKDVGSNGLQNYSLGSNPHFSLAIGTGKDGVKYVELVLQRQLDREEQGELNLLLTAIDGGSPPRSGTALVRIVVLDANDNIPIFEREVYEVRLAENSPSEQLVVRVMATDPDEGSNGKLQYAFTQTSERSRELFQLNPATGEIRIAGNPDFEEAKTHKMVVKATDGGGLSAHCKVQVEVLDVNDNAPEIALTSLTASIPEDAPPRTVVALFSVRDRDSGDNGRTECSIDGDLPFSLTPTFDNYYELRTNAALDRESTAQYNITITATDWGRTRLSSRESIFVQISDVNDNPPEFTQEIYTMSVTENNSPMLRIGSMNATDADAGKNARINYSLVRQEGKEQPEVSVNAENGDVYILRPLDYEKVRAFEVSVLASDSGSPPLSAQALLRVVVQDQNDNAPLVLHPSPDSSAAGELVPRWAPSGYLVAKVVAVDADAGQNAWLSYELAKATEPGLFRVGLHSGEVRTARAVSERDAPRQRLVVLVRDRGHPQRSATATLPVALVDGFSEAHLRVSEEAPAADPDEPLTLYLIASLACVSVLFLATALAAVVVKVRRARRSETETLPTFPTIATESSAGSLPRSYLYDVCFAAGTVNSEFRFLRPLFPCFPAGLPPGPGEQRSSVCSQDVANLGEEGDWAAQGRAPLSEDTGPGAAEAACTANGGLGLNVTSDQNPWLSHQ
SIO_010081: LOC116794529
subclass of: SO_0000673
so part of: LOC116794529
location: complement(join(2955852..2955971,2957401..2959836))
location: region:2955852-2959836:-1
so has part: feature:2957401-2959836:-1:exon
so has part: feature:2955852-2955971:-1:exon

XP_032559151.1
type: Protein
SIO_000068: ncbiprotein

position:2955852:-1
position: 2955852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2959836:-1
position: 2959836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2957401-2959836:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2955852-2955971:-1:exon

LOC116794237
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794237
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3000799..3097424)
location: region:3000799-3097424:-1
so has part: feature:3000799-3097424:-1:exon
subclass of: SO_0000010

116794237
type: Gene
SIO_000068: ncbigene

position:3000799:-1
position: 3000799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3097424:-1
position: 3097424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3000799-3097424:-1:exon

LOC116794237
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794237
product: protocadherin alpha-C1-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 1 long SRA read, 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032702770.1
SIO_010081: LOC116794237
subclass of: SO_0000673
so part of: LOC116794237
location: complement(join(3000799..3002720,3003158..3003259,3038149..3038237,3040405..3040463,3088911..3091579))
location: region:3000799-3091579:-1
so has part: feature:3088911-3091579:-1:exon
so has part: feature:3040405-3040463:-1:exon
so has part: feature:3038149-3038237:-1:exon
so has part: feature:3003158-3003259:-1:exon
so has part: feature:3000799-3002720:-1:exon

position:3091579:-1
position: 3091579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3088911-3091579:-1:exon

position:3088911:-1
position: 3088911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3040405-3040463:-1:exon

position:3040405:-1
position: 3040405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3040463:-1
position: 3040463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3038149-3038237:-1:exon

position:3038149:-1
position: 3038149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3038237:-1
position: 3038237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3003158-3003259:-1:exon

position:3003158:-1
position: 3003158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3003259:-1
position: 3003259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3000799-3002720:-1:exon

position:3002720:-1
position: 3002720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116794237
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794237
product: protocadherin alpha-C1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 ESTs, 2 long SRA reads, 58 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032702765.1
SIO_010081: LOC116794237
subclass of: SO_0000673
so part of: LOC116794237
location: complement(join(3000799..3003259,3038149..3038237,3040405..3040463,3088911..3091578))
location: region:3000799-3091578:-1
so has part: feature:3088911-3091578:-1:exon
so has part: feature:3040405-3040463:-1:exon
so has part: feature:3038149-3038237:-1:exon
so has part: feature:3000799-3003259:-1:exon

position:3091578:-1
position: 3091578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3088911-3091578:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3040405-3040463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3038149-3038237:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3000799-3003259:-1:exon

LOC116794237
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794237
product: protocadherin alpha-C1-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 ESTs, 2 long SRA reads, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032702769.1
SIO_010081: LOC116794237
subclass of: SO_0000673
so part of: LOC116794237
location: complement(join(3000799..3003259,3038149..3038237,3040405..3040463,3078990..3081546))
location: region:3000799-3081546:-1
so has part: feature:3078990-3081546:-1:exon
so has part: feature:3040405-3040463:-1:exon
so has part: feature:3038149-3038237:-1:exon
so has part: feature:3000799-3003259:-1:exon

position:3081546:-1
position: 3081546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3078990-3081546:-1:exon

position:3078990:-1
position: 3078990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3040405-3040463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3038149-3038237:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3000799-3003259:-1:exon

LOC116794237
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794237
product: protocadherin alpha-C1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 ESTs, 2 long SRA reads, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032702767.1
SIO_010081: LOC116794237
subclass of: SO_0000673
so part of: LOC116794237
location: complement(join(3000886..3003259,3038149..3038237,3040405..3040463,3088911..3091040,3096926..3097424))
location: region:3000886-3097424:-1
so has part: feature:3096926-3097424:-1:exon
so has part: feature:3088911-3091040:-1:exon
so has part: feature:3040405-3040463:-1:exon
so has part: feature:3038149-3038237:-1:exon
so has part: feature:3000886-3003259:-1:exon

position:3000886:-1
position: 3000886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3096926-3097424:-1:exon

position:3096926:-1
position: 3096926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3088911-3091040:-1:exon

position:3091040:-1
position: 3091040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3040405-3040463:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3038149-3038237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3000886-3003259:-1:exon

LOC116794237
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794237
product: protocadherin alpha-C1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 ESTs, 2 long SRA reads, 47 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032702768.1
SIO_010081: LOC116794237
subclass of: SO_0000673
so part of: LOC116794237
location: complement(join(3000886..3003259,3038149..3038237,3040405..3040463,3094808..3097424))
location: region:3000886-3097424:-1
so has part: feature:3094808-3097424:-1:exon
so has part: feature:3040405-3040463:-1:exon
so has part: feature:3038149-3038237:-1:exon
so has part: feature:3000886-3003259:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3094808-3097424:-1:exon

position:3094808:-1
position: 3094808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3040405-3040463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3038149-3038237:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3000886-3003259:-1:exon

LOC116794237
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794237
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin alpha-2-like isoform X5
translation: MWGAAESRAGPRRGPEAAAMGDRVWGAVLRVVAVQAAWALCSGQVRYSVPEEAKAGTVVGRVAQDVGLEAGEAEARRLRLVSAGRRASVEVSGASGALVVSSRLDREELCGKSAPCALRLEVLVERPLRVFHVELEVTDINDNAPSFRVNEEALNIPESSLVGSRFPLEGASDADIGANAQLSYTLSPSEHFRLEQRGNNDEGASLGLIVTKPLDRETMPVHRLLLTASDGGRPSLTGTMEVVISVLDVNDNAPKFNQSVYKVKVLEGSELGTLLITLSATDPDEGINSDIIYLFGRHVTTEVKEMFTIDENKGEIRLQGKLDYEEMNSYEIPVEARDKGSPPWSGHCKVLLEVLDVNDNAPEVRVTSLSVPVAEDASLGTVVALLSVWDRDSGSNGDVRCWVWPSGPFVLEATLSGSYSLVLREALDRERVSEYEVEVRAEDGGSPSLGGRVGLRVPVSDVNDNAPSFAQAVYTVLARENNLAGAELARLWARDPDEAGNGRVSYSLWEGALGGGSGWWGSGWAGGVSASSYVSVEAESGVLRALQPLDYEEVQVLQFEVRAVDAGEPALCGNATVQLFVLDENDNAPALLPAAGGGAEAGSGSGEAGTLWAWAAWGSPSGQVVAKIRAVDADSGYNAWLRYELWEPRGKSALFRVGLYSGEVSTARALEEADGPRQRLVIVVRDHGEPARSATATLSVSLVEGGEAALAAAAGSSSLLPRSLAGGESGSGPAALASSATNVWLVVAICGVSSVFLLAVVLYGASRWAPRAAVLSGPGPTTLVCASEVGSWSYSQRHSRSLCVADGAAKSDLMVFSPNFPPPPGAASENGSAGTGPSLSPLTSIMPKHPNPDWRYSASLRAGMQSAVHMEEAAVLRGGPGGPDQQWPTVSSATAEPEAGEVSPPVGAGVNSNSWTFKFGPGNSKQGGPESKKQTQVSFLLRRKGESSQYSQ
SIO_010081: LOC116794237
subclass of: SO_0000673
so part of: LOC116794237
location: complement(join(3002650..3002720,3003158..3003259,3038149..3038237,3040405..3040463,3088911..3091448))
location: region:3002650-3091448:-1
so has part: feature:3088911-3091448:-1:exon
so has part: feature:3040405-3040463:-1:exon
so has part: feature:3038149-3038237:-1:exon
so has part: feature:3003158-3003259:-1:exon
so has part: feature:3002650-3002720:-1:exon

XP_032558661.1
type: Protein
SIO_000068: ncbiprotein

position:3002650:-1
position: 3002650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3091448:-1
position: 3091448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3088911-3091448:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3040405-3040463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3038149-3038237:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3003158-3003259:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3002650-3002720:-1:exon

LOC116794237
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794237
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin alpha-2-like isoform X2
translation: MGDRVWGAVLRVVAVQAAWALCSGQVRYSVPEEAKAGTVVGRVAQDVGLEAGEAEARRLRLVSAGRRASVEVSGASGALVVSSRLDREELCGKSAPCALRLEVLVERPLRVFHVELEVTDINDNAPSFRVNEEALNIPESSLVGSRFPLEGASDADIGANAQLSYTLSPSEHFRLEQRGNNDEGASLGLIVTKPLDRETMPVHRLLLTASDGGRPSLTGTMEVVISVLDVNDNAPKFNQSVYKVKVLEGSELGTLLITLSATDPDEGINSDIIYLFGRHVTTEVKEMFTIDENKGEIRLQGKLDYEEMNSYEIPVEARDKGSPPWSGHCKVLLEVLDVNDNAPEVRVTSLSVPVAEDASLGTVVALLSVWDRDSGSNGDVRCWVWPSGPFVLEATLSGSYSLVLREALDRERVSEYEVEVRAEDGGSPSLGGRVGLRVPVSDVNDNAPSFAQAVYTVLARENNLAGAELARLWARDPDEAGNGRVSYSLWEGALGGGSGWWGSGWAGGVSASSYVSVEAESGVLRALQPLDYEEVQVLQFEVRAVDAGEPALCGNATVQLFVLDENDNAPALLPAAGGGAEAGSGSGEAGTLWAWAAWGSPSGQVVAKIRAVDADSGYNAWLRYELWEPRGKSALFRVGLYSGEVSTARALEEADGPRQRLVIVVRDHGEPARSATATLSVSLVEGGEAALAAAAGSSSLLPRSLAGGESGSGPAALASSATNVWLVVAICGVSSVFLLAVVLYGASRWAPRAAVLSGPGPTTLVCASEVGSWSYSQRHSRSLCVADGAAKSDLMVFSPNFPPPPGAASENGSAGTGPSLSPLTSIMPKHPNPDWRYSASLRAGMQSAVHMEEAAVLRGGPGGPDQQWPTVSSATAEPEAGEVSPPVGAGVNSNSWTFKFGPGNSKQGGPGELPDKFIIPGSPAIISIRQEPPNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTENSDQ
SIO_010081: LOC116794237
subclass of: SO_0000673
so part of: LOC116794237
location: complement(join(3002949..3003259,3038149..3038237,3040405..3040463,3088911..3091040,3096926..3097276))
location: region:3002949-3097276:-1
so has part: feature:3096926-3097276:-1:exon
so has part: feature:3088911-3091040:-1:exon
so has part: feature:3040405-3040463:-1:exon
so has part: feature:3038149-3038237:-1:exon
so has part: feature:3002949-3003259:-1:exon

XP_032558658.1
type: Protein
SIO_000068: ncbiprotein

position:3002949:-1
position: 3002949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3097276:-1
position: 3097276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3096926-3097276:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3088911-3091040:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3040405-3040463:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3038149-3038237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3002949-3003259:-1:exon

LOC116794237
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794237
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin alpha-2-like isoform X3
translation: MGDRVWGAVLRVVAVQAAWALCSGQVRYSVPEEAKAGTVVGRVAQDVGLEAGEAEARRLRLVSAGRRASVEVSGASGALVVSSRLDREELCGKSAPCALRLEVLVERPLRVFHVELEVTDINDNAPTFPAARKNISIPEFTTLPGSRFPLEGASDADIGANAQLSYTLSPSEYFRIEEENTNSRTKYLFLVLIKALDRETMPVHQLLLTASDGGRPSLTGTMELVISVLDVNDNAPQFNQSVYNVVLPEDTLVGKLVTRVNATDPDLGIYGEVTYEIGTVVPASASDIFSIDTNSGEIRLTGALDFETVTAYDLNIKAKDKGTPPLSGHCKVVLEVLDVNDNAPEVRVTSLSVPVAEDASLGTVVALLSVWDRDSGSNGDVRCWVWPSGPFVLEATLSGSYSLVLREALDRERVSEYEVEVRAEDGGSPSLGGRVGLRVPVSDVNDNAPSFAQAVYTVLARENNLAGAELARLWARDPDEAGNGRVSYSLWEGASGGGSGWWGSGWAGGVSASSYVSVEAESGVLRALQPLDYEEVQVLQFEVRAVDAGEPALCGNATVQLFVLDENDNAPALLPAAGGGAEAGSGSGEAGTLWAWAAWGSPSGQVVAKIRAVDADSGYNAWLRYELWEPRGKSALFRVGLYSGEVSTARALEEADGPRQRLVIVVRDHGEPARSATATLSVSLVEGGEAALAAAAGSSSLLPRSLAGGESGSGPAALASSATNVWLVVAICGVSSVFLLAVVLYGASRWAPRAAVLSGPGPTTLVCASEVGSWSYSQRHSRSLCVADGAAKSDLMVFSPNFPPPPGAAAKDTQPEPPSLLDTPKHPNPDWRYSASLRAGMQSAVHMEEAAVLRGGPGGPDQQWPTVSSATAEPEAGEVSPPVGAGVNSNSWTFKFGPGNSKQGGPGELPDKFIIPGSPAIISIRQEPPNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTENSDQ
SIO_010081: LOC116794237
subclass of: SO_0000673
so part of: LOC116794237
location: complement(join(3002949..3003259,3038149..3038237,3040405..3040463,3094808..3097276))
location: region:3002949-3097276:-1
so has part: feature:3094808-3097276:-1:exon
so has part: feature:3040405-3040463:-1:exon
so has part: feature:3038149-3038237:-1:exon
so has part: feature:3002949-3003259:-1:exon

XP_032558659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3094808-3097276:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3040405-3040463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3038149-3038237:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3002949-3003259:-1:exon

LOC116794237
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794237
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin alpha-2-like isoform X1
translation: MWGAAESRAGPRRGPEAAAMGDRVWGAVLRVVAVQAAWALCSGQVRYSVPEEAKAGTVVGRVAQDVGLEAGEAEARRLRLVSAGRRASVEVSGASGALVVSSRLDREELCGKSAPCALRLEVLVERPLRVFHVELEVTDINDNAPSFRVNEEALNIPESSLVGSRFPLEGASDADIGANAQLSYTLSPSEHFRLEQRGNNDEGASLGLIVTKPLDRETMPVHRLLLTASDGGRPSLTGTMEVVISVLDVNDNAPKFNQSVYKVKVLEGSELGTLLITLSATDPDEGINSDIIYLFGRHVTTEVKEMFTIDENKGEIRLQGKLDYEEMNSYEIPVEARDKGSPPWSGHCKVLLEVLDVNDNAPEVRVTSLSVPVAEDASLGTVVALLSVWDRDSGSNGDVRCWVWPSGPFVLEATLSGSYSLVLREALDRERVSEYEVEVRAEDGGSPSLGGRVGLRVPVSDVNDNAPSFAQAVYTVLARENNLAGAELARLWARDPDEAGNGRVSYSLWEGALGGGSGWWGSGWAGGVSASSYVSVEAESGVLRALQPLDYEEVQVLQFEVRAVDAGEPALCGNATVQLFVLDENDNAPALLPAAGGGAEAGSGSGEAGTLWAWAAWGSPSGQVVAKIRAVDADSGYNAWLRYELWEPRGKSALFRVGLYSGEVSTARALEEADGPRQRLVIVVRDHGEPARSATATLSVSLVEGGEAALAAAAGSSSLLPRSLAGGESGSGPAALASSATNVWLVVAICGVSSVFLLAVVLYGASRWAPRAAVLSGPGPTTLVCASEVGSWSYSQRHSRSLCVADGAAKSDLMVFSPNFPPPPGAASENGSAGTGPSLSPLTSIMPKHPNPDWRYSASLRAGMQSAVHMEEAAVLRGGPGGPDQQWPTVSSATAEPEAGEVSPPVGAGVNSNSWTFKFGPGNSKQGGPGELPDKFIIPGSPAIISIRQEPPNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTENSDQ
SIO_010081: LOC116794237
subclass of: SO_0000673
so part of: LOC116794237
location: complement(join(3002949..3003259,3038149..3038237,3040405..3040463,3088911..3091448))
location: region:3002949-3091448:-1
so has part: feature:3088911-3091448:-1:exon
so has part: feature:3040405-3040463:-1:exon
so has part: feature:3038149-3038237:-1:exon
so has part: feature:3002949-3003259:-1:exon

XP_032558656.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3088911-3091448:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3040405-3040463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3038149-3038237:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3002949-3003259:-1:exon

LOC116794237
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794237
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin alpha-C1-like isoform X4
translation: MRGYLMVFCLICCTADGQIVYSIAEETERGASVGNVAKDLGIDAATLSARRFRMITGSSKQYFNINASTGALTVNEPIDREQLCELKSVCLLNYELVLENPLELYRMEFKVLDINDNSPSFPLSEYHISVPEFLSPGARFTLPNAQDLDEGANGVQNYTLSPDEHFHLEMQIRGDGSKYPELVLKKALDREQQATHRLVLTAKDGGNPPKSGDVPVIVTVLDTNDNAPEFEHSVYRASILENSPSGTLVVQVHATDLDEGPNGEIRYSFSNTTSADLQRMFLIHPHTGEVTVNGVLAVQRPLLEMLIEARDNGAFGMSSTAKLLVEITDVNNHGPEITITSLSSPIPEDAVPGTVIALLSILDKDPGENGKVTCHIPDNLPFQLKPSLQNYYRLVTSEVLDRELISEYNITITATDLGSPPITTQKTVWVQISDVNDNPPVFSADAFDVFVEENNPLGAFIYQVSASDPDIGENGRVSYMLRNSTVAGSALTSFLSVNLANGSIYAKRAFDFEQLQSFYFQVEAKDNGSPALSAAITVNVYISDQNDNAPAILYPTSQNGSIAVEVVPRLADEDYLVTKVVADDEDNAQNAWLSYHLAHASDSTLFQLSPHTGELRTTRSMRSTDFLKHKVVVVVRDHGDPPLSSTVTVGILLADTLPQALPDFDDGGERVPLLNATNIYLIVSLACVSFIFAAFLLFLAAVRLCRCRTCCCCCGCCCPADDYKKYCYSVHMLPGSHLPPDMLEVTGVGKLTHTYLYRASVGLGPGNSSIPNGDAGNVPSGSRLQVPGPCIQVQQVQSDRLSAVLVPKHPNPDWRYSASLRAGMQSAVHMEEAAVLRGGPGGPDQQWPTVSSATAEPEAGEVSPPVGAGVNSNSWTFKFGPGNSKQGGPGELPDKFIIPGSPAIISIRQEPPNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTENSDQ
SIO_010081: LOC116794237
subclass of: SO_0000673
so part of: LOC116794237
location: complement(join(3002949..3003259,3038149..3038237,3040405..3040463,3078990..3081407))
location: region:3002949-3081407:-1
so has part: feature:3078990-3081407:-1:exon
so has part: feature:3040405-3040463:-1:exon
so has part: feature:3038149-3038237:-1:exon
so has part: feature:3002949-3003259:-1:exon

XP_032558660.1
type: Protein
SIO_000068: ncbiprotein

position:3081407:-1
position: 3081407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3078990-3081407:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3040405-3040463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3038149-3038237:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3002949-3003259:-1:exon

LOC116794239
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794239
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3097537..3104783)
location: region:3097537-3104783:-1
so has part: feature:3097537-3104783:-1:exon
subclass of: SO_0000010

116794239
type: Gene
SIO_000068: ncbigene

position:3097537:-1
position: 3097537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3104783:-1
position: 3104783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3097537-3104783:-1:exon

LOC116794239
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794239
product: protocadherin alpha-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032702772.1
SIO_010081: LOC116794239
subclass of: SO_0000673
so part of: LOC116794239
location: complement(3097537..3104783)
location: region:3097537-3104783:-1
so has part: feature:3097537-3104783:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3097537-3104783:-1:exon

LOC116794239
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794239
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin alpha-2-like
translation: MGDRVWGAVLRVVAVQAAWALCSGQVRYSVPEEAKAGTVVGRVAQDVGLEAGEAEARRLRLVSAGRRASVEVSGASGALVVSSRLDREELCGKSAPCALRLEVLVERPLRVFHVELEVTDINDNAPIFPAARKNLTIAEFNTLPGSRFPLEGASDADIGANAQLSYTLSPSEHFSLDLQKSNERNIEPELVLMKPLDRESMPVHRLLLTASDGGRPSLTGTMELVISVLDVNDNAPQFNQSVYKVQLLESAAVGTVVVRVNATDADEGSNSEVTYSVTNFFPPSGKDVISVNEKTGEIHLTGALDFEEVSMFDFRIEARDQGWPPLSGHCKVLLEVLDVNDNAPEVRVTSLSVPVAEDASLGTVVALLSVWDRDSGSNGDVRCWVWPSGPFVLEATLSGSYSLVLREALDRERVSEYEVEVRAEDGGSPSLGGRVGLRVPVSDVNDNAPSFAQAVYTVLARENNLAGAELARLWARDPDEAGNGRVSYSLWEGALGGGSGWWGSGWAGGVSASSYVSVEAESGVLRALQPLDYEEVQVLQFEVRAVDAGEPALCGNATVQLFVLDENDNAPALLPAAGGGAEAGSGSGEAGTLWAWAAWGSPSGQVVAKIRAVDADSGYNAWLRYELWEPRGKSALFRVGLYSGEVSTARALEEADGPRQRLVIVVRDHGEPARSATATLSVSLVEGGEAALAAAAGSSSLLPRSLAGGESGSGPAALASSATNVWLVVAICGVSSVFLLAVVLYGASRWAPRAAVLSGPGPTTLVCASEVGSWSYSQRHSRSLCVADGAAKSDLMVFSPNFPPPPGAAAKDTQPEPPSLLDTVSDNPSDSFLPLGTLLSSVPSDPPPGPVLLGVWPRLRYLRAVGAYGYYRELSMYRPVLSGEPWLLVCVSAEITVLWYPGAEILLQWAGVVS
SIO_010081: LOC116794239
subclass of: SO_0000673
so part of: LOC116794239
location: complement(3102039..3104783)
location: region:3102039-3104783:-1
so has part: feature:3102039-3104783:-1:exon

XP_032558663.1
type: Protein
SIO_000068: ncbiprotein

position:3102039:-1
position: 3102039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3102039-3104783:-1:exon

LOC116794588
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794588
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3104884..3113828)
location: region:3104884-3113828:-1
so has part: feature:3104884-3113828:-1:exon
subclass of: SO_0000010

116794588
type: Gene
SIO_000068: ncbigene

position:3104884:-1
position: 3104884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3113828:-1
position: 3113828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3104884-3113828:-1:exon

LOC116794588
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794588
product: protocadherin alpha-2-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032703362.1
SIO_010081: LOC116794588
subclass of: SO_0000673
so part of: LOC116794588
location: complement(join(3104884..3104978,3111363..3113828))
location: region:3104884-3113828:-1
so has part: feature:3111363-3113828:-1:exon
so has part: feature:3104884-3104978:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3111363-3113828:-1:exon

position:3111363:-1
position: 3111363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3104884-3104978:-1:exon

position:3104978:-1
position: 3104978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116794588
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794588
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protocadherin alpha-2-like
translation: MGDRVWGAVLRVVAVQAAWALCSGQVRYSVPEEAKAGTVVGRVAQDVGLEAGEAEARRLRLVSAGRRASVEVSGASGALVVSSRLDREELCGKSAPCALRLEVLVERPLRVFHVELEVTDINDNVPTFPAARKNISIAELSVVGSRFPLEGASDADIGANAQLSYTLSPSEHFRVEEENSNSRSKSLFLVLTKPLDRETMAVHRLLLTASDGGRPPLTGTVELVVSVLDANDNAPQFNQSVYNVHLPEDALQGTLVARVNATDPDEGSNREMKYEIDTVVPPSASDVFSIDANSGEIRLTGALDFEAVTLYDVHVKATDKGTPPLSGHCKVVVEVLDVNDNAPEVRVTSLSVPVAEDASLGTVVALLSVWDRDSGSNGDVRCWVWPSGPFVLEATLSGSYSLVLREALDRERVSEYEVEVRAEDGGSPSLGGRVGLRVPVSDVNDNAPSFAQAVYTVLARENNLAGAELARLWARDPDEAGNGRVSYSLWEGALGGGSGWWGSGWAGGVSASSYVSVEAESGVLRALQPLDYEEVQVLQFEVRAVDAGEPALCGNATVQLFVLDENDNAPALLPAAGGGAEAGSGSGEAGTLWAWAAWGSPSGQVVAKIRAVDADSGYNAWLRYELWEPRGKSALFRVGLYSGEVSTARALEEADGPRQRLVIVVRDHGEPARSATATLSVSLVEGGEAALAAAAGSLSLLPRSLAGGESGSGPAALASSATNVWLVVAICGVSSVFLLAVVLYGASRWAPRAAVLSGPGPTTLVCASEVGSWSYSQRHSRSLCVADGAAKSDLMVFSPNFPPPPGAAAKDTXAGASLSPRHACEAAEQRTVSLQAEEGRVGGSAPVRRRARL
SIO_010081: LOC116794588
subclass of: SO_0000673
so part of: LOC116794588
location: complement(join(3104884..3104978,3111363..3113828))
location: region:3104884-3113828:-1
so has part: feature:3111363-3113828:-1:exon
so has part: feature:3104884-3104978:-1:exon

XP_032559253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3111363-3113828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3104884-3104978:-1:exon

LOC116794589
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794589
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3118481..3121132)
location: region:3118481-3121132:-1
so has part: feature:3118481-3121132:-1:exon
subclass of: SO_0000010

116794589
type: Gene
SIO_000068: ncbigene

position:3118481:-1
position: 3118481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3121132:-1
position: 3121132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3118481-3121132:-1:exon

LOC116794589
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794589
product: protocadherin alpha-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032703363.1
SIO_010081: LOC116794589
subclass of: SO_0000673
so part of: LOC116794589
location: complement(3118481..3121132)
location: region:3118481-3121132:-1
so has part: feature:3118481-3121132:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3118481-3121132:-1:exon

LOC116794589
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794589
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin alpha-2-like
translation: MGDRVWGAVLRVVAVQAAWALCSGQVRYSVPEEAKAGTVVGRVAQDVGLEAGEAEARRLRLVSAGRRASVEVSGASGALVVSSRLDREELCGKSAPCALRLEVLVERPLRVFHVELEVTDINDNAPTFPAARKNISLPENSPPGSRFPLEDASDADIGANAQLSYTLSPSEHFRIEEENTDSHSKSLFLIIAKPLDRETTPVHRLLLTASDGGRPSLTGTVELVISVLDVNDNVPQFNQSVYKVGLPEDALVGKIVVRVNATDPDLGIYGEVIYEIDSVIPPSATDVFSIDANSGEIRLTGTLDYETVTIYNLQVRARDKGMPPLSGHCKVLLEVLDVNDNAPEVRVTSLSVPVAEDASLGTVVALLSVWDRDSGSNGDVRCWVWPSGPFVLEATLSGSYSLVLREALDRERVSEYEVEVRAEDGGSPSLGGRVGLRVPVSDVNDNAPSFAQAVYTVLARENNLAGAELARLWARDPDEAGNGRVSYSLWEGALGGGSGWWGSGWAGGVSASSYVSVEAESGVLRALQPLDYEEVQVLQFEVRAVDAGEPALCGNATVQLFVLDENDNAPALLPAAGGGAEAGSGSGEAGTLWAWAAWGSPSGQVVAKIRAVDADSGYNAWLRYELWEPRGKSALFRVGLYSGEVSTARALEEADGPRQRLVIVVRDHGEPARSATATLSVSLVEGGEAALAAAAGSSSLLPRSLAGGESGSGPAALASSATNVWLVVAICGVSSVFLLAVVLYGASRWAPRAAVLSGPGPTTLVCASEVGSWSYSQRHSRSLCVADGAAKSDLMVFSPNFPPPPGAAAKDTQPEPPSLLDTVSGPSLLLSPSSLLPSAPSLPPPGQAVLGAGLSSCSRRAMGALQVIKDVSGTFASLAEFFR
SIO_010081: LOC116794589
subclass of: SO_0000673
so part of: LOC116794589
location: complement(3118481..3121132)
location: region:3118481-3121132:-1
so has part: feature:3118481-3121132:-1:exon

XP_032559254.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3118481-3121132:-1:exon

LOC116794242
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794242
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3122069..3125986)
location: region:3122069-3125986:-1
so has part: feature:3122069-3125986:-1:exon
subclass of: SO_0000011

116794242
type: Gene
SIO_000068: ncbigene

position:3122069:-1
position: 3122069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3125986:-1
position: 3125986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3122069-3125986:-1:exon

LOC116794242
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116794242
product: uncharacterized LOC116794242
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004359734.1
SIO_010081: LOC116794242
subclass of: SO_0000673
so part of: LOC116794242
location: complement(join(3122069..3122296,3125083..3125986))
location: region:3122069-3125986:-1
so has part: feature:3125083-3125986:-1:exon
so has part: feature:3122069-3122296:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3125083-3125986:-1:exon

position:3125083:-1
position: 3125083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3122069-3122296:-1:exon

position:3122296:-1
position: 3122296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116794241
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794241
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<3126157..3128652)
location: region:3126157-3128652:-1
so has part: feature:3126157-3128652:-1:exon
subclass of: SO_0000010

116794241
type: Gene
SIO_000068: ncbigene

position:3126157:-1
position: 3126157
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:3128652:-1
position: 3128652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3126157-3128652:-1:exon

LOC116794241
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794241
product: protocadherin alpha-13-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032702774.1
SIO_010081: LOC116794241
subclass of: SO_0000673
so part of: LOC116794241
location: complement(<3126157..3128652)
location: region:3126157-3128652:-1
so has part: feature:3126157-3128652:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3126157-3128652:-1:exon

LOC116794241
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794241
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin alpha-13-like
translation: MGDRVWGAVLRVVAVQAAWALCSGQVRYSVPEEAKAGTVVGRVAQDVGLEAGEAEARRLRLVSAGRRASVEVSGASGALVVSSRLDREELCGKSAPCALRLEVLVERPLRVFHVELEVTDINDNAPIFPAARKNISIAELSTMPGSRFPLEGASDADIGANAQLSYTLSPSEHFSLDLQKSNEPNIEPELVLTKPLDRETMPVHRLLLTASDGGRPSLTGTMELVISVLDANDNPPQFNQSVYKVQLPENALEGTLVMRVNATDPDEGSNSEVTYTVTNYFPPSGSDVISINPTTGEIRLTGALDFEETNVFQFRIEARDQGTPPLSGHCKVLLEVLDVNDNAPEVRVTSLSVPVAEDASLGTVVALLSVWDRDSGSNGDVRCWVWPSGPFVLEATLSGSYSLVLREALDRERVSEYEVEVHAEDGGSPSLGGRVGLRVPVSDVNDNAPSFAQAVYTVLARENNLAGAELARLWARDPDEAGNGRVSYSLWEGALGGGSGWWGSGWAGGVSASSYVSVEAESGVLRALQPLDYEEVQVLQFEVRAVDAGEPALCGNATVQLFVLDENDNAPALLPAAGGGAEAGSGSGEAGTLWAWAAWGSPSGQVVAKIRAVDADSGYNAWLRYELWEPRGKSALFRVGLYSGEVSTARALEEADGPRQRLVIVVRDHGEPARSATATLSVSLVEGGEAALAAAAGSSSLLPRSLAGGESGSGPAALASSATNVWLVVAICGVSSVFLLAVVLYGASRWAPRAAVLSGPGPTTLVCASEVGSWSYSQRHSRSLCVADGAAKSDLMVFSPNFPPPPGAAAKDTQPEPPSLLDTVSDPSLLLS
SIO_010081: LOC116794241
subclass of: SO_0000673
so part of: LOC116794241
location: complement(<3126157..3128652)
location: region:3126157-3128652:-1
so has part: feature:3126157-3128652:-1:exon

XP_032558665.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3126157-3128652:-1:exon

LOC116794590
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794590
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3133359..3135941)
location: region:3133359-3135941:-1
so has part: feature:3133359-3135941:-1:exon
subclass of: SO_0000010

116794590
type: Gene
SIO_000068: ncbigene

position:3133359:-1
position: 3133359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3135941:-1
position: 3135941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3133359-3135941:-1:exon

LOC116794590
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794590
product: protocadherin alpha-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032703364.1
SIO_010081: LOC116794590
subclass of: SO_0000673
so part of: LOC116794590
location: complement(3133359..3135941)
location: region:3133359-3135941:-1
so has part: feature:3133359-3135941:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3133359-3135941:-1:exon

LOC116794590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794590
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin alpha-2-like
translation: MGDRVWGAVLRVVAVQAAWALCSGQVRYSVPEEAKAGTVVGRVAQDVGLEAGEAEARRLRLVSAGRRASVEVSGASGALVVSSRLDREELCGKSAPCALRLEVLVERPLRVFHVELEVTDINDNAPIFPAARKNISIAEFTSLPGSRFPLEGASDADIGANAQLSYTLSPNEHFSLDIQKSNERNIVPDLVLMKPLDRETMAVHRLLLTASDGGRPSLTGTMELVISVLDANDNAPQFNQSVYKVQLPESAAVGTLVARVNATDADEGSNSELTYTATNFIPASGRDVISLNPKTGEIHLTGALDFEEVSIFDFRIEARDQGTPPLSSHCSMELEVLDVNDNAPEVRVTSLSVPVAEDASLGTVVALLSVWDRDSGSNGDVRCWVWPSGPFVLEATLSGSYSLVLREALDRERVSEYEVEVRAEDGGSPSLGGRVGLRVPVSDVNDNAPSFAQAVYTVLARENNLAGAELARLWARDPDEAGNGRVSYSLWEGASGGGSGWWGSGWAGGVSASSYVSVEAESGVLRALQPLDYEEVQVLQFEVRAVDAGEPALCGNATVQLFVLDENDNAPALLPAAGGGAVAGSGSGEAGTLWAWAAWGSPSGQVVAKIRAVDADSGYNAWLRYELWEPRGKSALFRVGLYSGEVSTARALEEADGPRQRLVIVVRDHGEPARSATATLSVSLVEGGEAALAAAAGSSSLLPRSLAGGESGSGPAALASSATNVWLVVAICGVSSVFLLAVVLCGASRWAPRAAVLSGPGPTTLVCASEVGSWSYSQRHSRSLCVADGAAKSDLMVFSPNFPPPPGAAAKDTQPEPPSLLDTVSDPSSFSRFLLSHPLLRQCSEPGSAPAVAGRWLLCR
SIO_010081: LOC116794590
subclass of: SO_0000673
so part of: LOC116794590
location: complement(3133359..3135941)
location: region:3133359-3135941:-1
so has part: feature:3133359-3135941:-1:exon

XP_032559255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3133359-3135941:-1:exon

LOC116794591
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794591
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3141019..3143724)
location: region:3141019-3143724:-1
so has part: feature:3141019-3143724:-1:exon
subclass of: SO_0000010

116794591
type: Gene
SIO_000068: ncbigene

position:3141019:-1
position: 3141019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3143724:-1
position: 3143724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3141019-3143724:-1:exon

LOC116794591
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794591
product: protocadherin alpha-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032703365.1
SIO_010081: LOC116794591
subclass of: SO_0000673
so part of: LOC116794591
location: complement(3141019..3143724)
location: region:3141019-3143724:-1
so has part: feature:3141019-3143724:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3141019-3143724:-1:exon

LOC116794591
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794591
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin alpha-2-like
translation: MGDRVWGAVLRVVAVQAAWALCSGQVRYSVPEEAKAGTVVGRVAQDVGLEAGEAEARRLRLVSAGRRASVEVSGASGALVVSSRLDREELCGKSAPCALRLEVLVERPLRVFHVELEVTDINDNAPIFPAARKNISIAEFTSLPGSRFPLEGASDADIGANAQLSYTLSPNEHFSLDIQKSNERNIVPDLVLMKPLDRETMAVHRLLLTASDGGRPSLTGTMELVISVLDANDNAPQFNQSVYKVQLPESAAVGTLVARVNATDADEGSNSELTYTATNFIPASGRDVISLNPKTGEIHLTGALDFEEVSIFDFRIEARDQGTPPLSSHCSMELEVLDVNDNAPEVRVTSLSVPVAEDASLGTVVALLSVWDRDSGSNGDVRCWVWPSGPFVLEATLSGSYSLVLREALDRERVSEYEVEVRAEDGGSPSLGGRVGLRVPVSDVNDNAPSFAQAVYTVLARENNLAGAELARLWARDPDEAGNGRVSYSLWEGASGGGSGWWGSGWAGGVSASSYVSVEAESGVLRALQPLDYEEVQVLQFEVRAVDAGEPALCGNATVQLFVLDENDNAPALLPAAGGGAEAGSGSGEAGTRWAWAAWGSPSGQVVAKIRAVDADSGYNAWLRYELWEPRGKSALFRVGLYSGEVSTARALEEADGPRQRLVIVVRDHGEPARSATATLSVSLVEGGEAALAAAAGSSSLLPRSLAGGESGSGPAALASSATNVWLVVAICGVSSVFLLAVVLCGASRWAPRAAVLSGPGPTTLVCASEVGSWSYSQRHSRSLCVADGAAKSDLMVFSPNFPPPPGAAAKDTQPEPPSLLDTVSDPSLLLSPSSLLPLPLLSRPLGRRCREPGSVPAARGQWVLCGRLRISMDLLICLRFLAGVPRLLVVGGEDLPEAEV
SIO_010081: LOC116794591
subclass of: SO_0000673
so part of: LOC116794591
location: complement(3141019..3143724)
location: region:3141019-3143724:-1
so has part: feature:3141019-3143724:-1:exon

XP_032559256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3141019-3143724:-1:exon

LOC116794592
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794592
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3148802..3151504)
location: region:3148802-3151504:-1
so has part: feature:3148802-3151504:-1:exon
subclass of: SO_0000010

116794592
type: Gene
SIO_000068: ncbigene

position:3148802:-1
position: 3148802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3151504:-1
position: 3151504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3148802-3151504:-1:exon

LOC116794592
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794592
product: protocadherin alpha-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032703366.1
SIO_010081: LOC116794592
subclass of: SO_0000673
so part of: LOC116794592
location: complement(3148802..3151504)
location: region:3148802-3151504:-1
so has part: feature:3148802-3151504:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3148802-3151504:-1:exon

LOC116794592
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794592
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin alpha-2-like
translation: MGDRVWGAVLRVVAVQAAWALCSGQVRYSVPEEAKAGTVVGRVAQDVGLEAGEAEARRLRLVSAGRRASVEVSGASGALVVSSRLDREELCGKSAPCALRLEVLVERPLRVFHVELEVTDINDNAPIFPSARKNISIPESSLVGSRFPLEGASDADIGANAQVSYTLSPSEYFRIQEENTNSRTKYLFLVLIKALDRETMPVHRLMLTASDGGRPSLTGTMELVISVLDVNDNPPQFNQSVYNVVLPEDALVGILVTRVNATDPDLGMYGEVIYEIDTVVPPSASDVFSIHTTSGEIRLTGALDFETVTTYDLNIKAKDKGTPPLSGHCTVALEVLDVNDNAPEVRVTSLSVPVAEDASLGTVVALLSVWDRDSGSNGDVRCWVWPSGPFVLEATLSGSYSLVLREALDRERVSEYEVEVRAEDGGSPSLGGRVGLRVPVSDVNDNAPSFAQAVYTVLARENNLAGAELARLWARDPDEAGNGRVSYSLWEGASGGGSGWWGSGWAGGVSASSYVSVEAESGVLRALQPLDYEEVQVLQFEVRAVDAGEPALCGNATVQLFVLDENDNAPALLPAAGGGAEAGSGSGEAGTLWAWAAWGSPSGQVVAKIRAVDADSGYNAWLRYELWEPRGKSALFRVGLYSGEVSTARALEEADGPRQRLVIVVRDHGEPARSATATLSVSLVEGGEAALAAAAGSSSLLPRSLAGGESGSGPAALASSATNVWLVVAICGVSSVFLLAVVLYGASRWAPRAAVLSGPGPTTLVCASEVGSWSYSQRHSRSLCVADGAAKSDLMVFSPNFPPPPGAAAKDTQPEPPSLLDTVSDPSLLLSPSSLLPLPLLSRPLGRRCREPGSVPAARGQWVLCGRLRISMDLLICLRFLAGVPRLLVVGGEDLPEAEV
SIO_010081: LOC116794592
subclass of: SO_0000673
so part of: LOC116794592
location: complement(3148802..3151504)
location: region:3148802-3151504:-1
so has part: feature:3148802-3151504:-1:exon

XP_032559257.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3148802-3151504:-1:exon

LOC116794238
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794238
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3155888..3166851)
location: region:3155888-3166851:-1
so has part: feature:3155888-3166851:-1:exon
subclass of: SO_0000010

116794238
type: Gene
SIO_000068: ncbigene

position:3155888:-1
position: 3155888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3166851:-1
position: 3166851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3155888-3166851:-1:exon

LOC116794238
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794238
product: protocadherin alpha-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032702771.1
SIO_010081: LOC116794238
subclass of: SO_0000673
so part of: LOC116794238
location: complement(join(3155888..3159252,3162783..3162788,3166812..3166851))
location: region:3155888-3166851:-1
so has part: feature:3166812-3166851:-1:exon
so has part: feature:3162783-3162788:-1:exon
so has part: feature:3155888-3159252:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3166812-3166851:-1:exon

position:3166812:-1
position: 3166812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3162783-3162788:-1:exon

position:3162783:-1
position: 3162783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3162788:-1
position: 3162788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3155888-3159252:-1:exon

position:3159252:-1
position: 3159252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116794238
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794238
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin alpha-2-like
translation: MGDRVWGAVLRVVAVQAAWALCSGQVRYSVPEEAKAGTVVGRVAQDVGLEAGEAEARRLRLVSAGRRASVEVSGASGALVVSSRLDREELCGKSAPCALRLEVLVERPLRVFHVELEVTDINDNAPIFPAARKNISLPENSPPGSRFLLEGASDADIGANAQLSYTLSPSEHFSLDLQKSNEQNIEPELVLMKPLDRETMAMHRLLLTASDGGRPSLTGTMELVISVLDANDNAPLFNQSVYKVQLPESAAVGTLVVRVNATDADEGINSEVTYSVTNFFPPSGRDLISINPKTGEIHLTGALDFEEVNIFDFRIEARDQGTPSLSGHCKVVLEVLDVNDNAPEVRVTSLSVPVAEDASLGTVVALLSVWDRDSGSNGDVRCWVWPSGPFVLEATLSGSYSLVLREALDRERVSEYEVEVRAEDGGSPSLGGRVGLRVPVSDVNDNAPSFAQAVYTVLARENNLAGAELARLWARDPDEAGNGRVSYSLWEGASGGGSGWWGSGWAGGVSASSYVSVEAESGVLRALQPLDYEEVQVLQFEVRAVDAGEPALCGNATVQLFVLDENDNAPALLPAAGGGAEAGSGSGEAGTLWAWAAWGSPSGQVVAKIRAVDADSGYNAWLRYELWEPRGKSALFRVGLYSGEVSTARALEEADGPRQRLVIVVRDHGEPARSATATLSVSLVEGGEAALAAAAGSSSLLPRSLAGGESGSGPAALASSATNVWLVVAICGVSSVFLLAVVLYGASRWAPRAAVLSGPGPTTLVCASEVGSWSYSQRHSRSLCVADGAAKSDLMVFSPNFPPPPGAAAKDTQPEPPSLLDTVSDNPLLLSPSSLLPLPLLSRPLGRRCREPGSIPAARWQWVLGGCLRMSMDLLICLRFLAGVPWLLVVGGEDLPEAEV
SIO_010081: LOC116794238
subclass of: SO_0000673
so part of: LOC116794238
location: complement(3156356..3159058)
location: region:3156356-3159058:-1
so has part: feature:3156356-3159058:-1:exon

XP_032558662.1
type: Protein
SIO_000068: ncbiprotein

position:3156356:-1
position: 3156356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3159058:-1
position: 3159058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3156356-3159058:-1:exon

LOC116794240
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794240
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3163540..3166612)
location: region:3163540-3166612:-1
so has part: feature:3163540-3166612:-1:exon
subclass of: SO_0000010

116794240
type: Gene
SIO_000068: ncbigene

position:3163540:-1
position: 3163540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3166612:-1
position: 3166612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3163540-3166612:-1:exon

LOC116794240
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794240
product: protocadherin alpha-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032702773.1
SIO_010081: LOC116794240
subclass of: SO_0000673
so part of: LOC116794240
location: complement(3163540..3166612)
location: region:3163540-3166612:-1
so has part: feature:3163540-3166612:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3163540-3166612:-1:exon

LOC116794240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794240
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin alpha-2-like
translation: MGDRVWGAVLRVVAVQAAWALCSGQVRYSVPEEAKAGTVVGRVAQDVGLEAGEAEARRLRLVSAGRRASVEVSGASGALVVSSRLDREELCGKSAPCALRLEVLVERPLRVFHVELEVTDINDNAPIFPAARKNISIAESSLVGSRFPLEGASDADIGANAQLSYTLSPSEHFSLDLQKSNEPNIEPELVLTKPLDRETVAVHRLLLTASDGGRPSLTGTMELVISVQDANDNAPQFNQSVYKVQLPESAAVGTLVMRVNATDPDEGSNSEVTYTVTNYFPPRGSDVISINPTTGEIRLTGALDFEKTNVFQFRIESRDQGTPSLSGHCKVVLEVLDVNDNAPEVRVTSLSVPVAEDASLGTVVALLSVWDRDSGSNGDVRCWVWPSGPFVLEATLSGSYSLVLREALDRERVSEYEVEVRAEDGGSPSLGGRVGLRVPVSDVNDNAPSFAQAVYTVLARENNLAGAELARLWARDPDEAGNGRVSYSLWEGASGGGSGWWGSGWAGGVSASSYVSVEAESGVLRALQPLDYEEVQVLQFEVRAVDAGEPALCGNATVQLFVLDENDNAPALLPAAGGGAEAGSGSGEAGTLWAWAAWGSPSGQVVAKIRAVDADSGYNAWLRYELWEPRGKSALFRVGLYSGEVSTARALEEADGPRQRLVIVVRDHGEPARSATATLSVSLVEGGEAALAAAAGSSSLLPRSLAGGESGSGPAALASSATNVWLVVAICGVSSVFLLAVVLYGASRWAPRAAVLSGPGPTTLVCASEVGSWSYSQRHSRSLCVADGAAKSDLMVFSPNFPPPPGAAAKDTQPELPSLLDTVSDNPLLLSPSSLLPLPLLSRPLGRPCRYPGSWPVWVVALQALTYVDCTFSSVWDKGISVTPWGSQLRFAAVDMICSSVE
SIO_010081: LOC116794240
subclass of: SO_0000673
so part of: LOC116794240
location: complement(3163904..3166612)
location: region:3163904-3166612:-1
so has part: feature:3163904-3166612:-1:exon

XP_032558664.1
type: Protein
SIO_000068: ncbiprotein

position:3163904:-1
position: 3163904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3163904-3166612:-1:exon

LOC116794593
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794593
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3170810..3173875)
location: region:3170810-3173875:-1
so has part: feature:3170810-3173875:-1:exon
subclass of: SO_0000010

116794593
type: Gene
SIO_000068: ncbigene

position:3170810:-1
position: 3170810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3173875:-1
position: 3173875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3170810-3173875:-1:exon

LOC116794593
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794593
product: protocadherin alpha-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032703367.1
SIO_010081: LOC116794593
subclass of: SO_0000673
so part of: LOC116794593
location: complement(3170810..3173875)
location: region:3170810-3173875:-1
so has part: feature:3170810-3173875:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3170810-3173875:-1:exon

LOC116794593
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794593
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin alpha-2-like
translation: MGDRVWGAVLRVVAVQAAWALCSGQVRYSVPEEAKAGTVVGRVAQDVGLEAGEAEARRLRLVSAGRRASVEVSGASGALVVSSRLDREELCGKSAPCALRLEVLVERPLRVFHVELEVTDINDNAPTFPAARKNISFSETSPPGSRFPLEGASDADIGANAQLSYTLSTSEHFSLDLEKTEEDGESLFLVLRKSLDRETLPVHRLLLTASDGGRPSLTGTVELVISVLDVNDNAPQFNQSVYKVQLPENTERGTLVITLSATDLDEGTNSDISYSLQILFPQDGRDLFRIDRDNGEIRLTGDLDFEDVGLYRLQADATDKGTPPLSGHCKVLLEVLDVNDNAPEVRVTSLSVPVAEDASLGTVVALLSVWDRDSGSNGDVRCWVWPSGPFVLEATLSGSYSLVLREALDRERVSEYEVEVRAEDGGSPSLGGRVGLRVPVSDVNDNAPSFAQAVYTVLARENNLAGAELARLWARDPDEAGNGRVSYSLWEGASGGGSGWWGSGWAGGVSASSYVSVEAESGVLRALQPLDYEEVQVLQFEVRAVDAGEPALCGNATVQLFVLDENDNAPALLPAAGGGAEAGSGSGEAGTLWAWAAWGSPSGQVVAKIRAVDADSGYNAWLRYELWEPRGKSALFRVGLYSGEVSTARALEEADGPRQRLVIVVRDHGEPARSATATLSVSLVEGGEAALAAAAGSSSLLPRSLAGGESGSGPAALASSATNVWLVVAICGVSSVFLLAVVLYGASRWAPRAAVLSGPGPTTLVCASEVGSWSYSQRHSRSLCVADGAAKSDLMVFSPNFPPPPGAAAKDTQPEPPSLLDTVSDPSSFSRFLLSHPLLRQCSEPGSAPAVAGPWVLCR
SIO_010081: LOC116794593
subclass of: SO_0000673
so part of: LOC116794593
location: complement(3171296..3173875)
location: region:3171296-3173875:-1
so has part: feature:3171296-3173875:-1:exon

XP_032559258.1
type: Protein
SIO_000068: ncbiprotein

position:3171296:-1
position: 3171296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3171296-3173875:-1:exon

LOC116794421
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794421
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3192771..3197757)
location: region:3192771-3197757:-1
so has part: feature:3192771-3197757:-1:exon
subclass of: SO_0000010

116794421
type: Gene
SIO_000068: ncbigene

position:3192771:-1
position: 3192771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3197757:-1
position: 3197757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3192771-3197757:-1:exon

LOC116794421
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794421
product: protocadherin-10-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032703080.1
SIO_010081: LOC116794421
subclass of: SO_0000673
so part of: LOC116794421
location: complement(join(3192771..3193042,3193282..3193370,3193475..3193533,3194725..3197757))
location: region:3192771-3197757:-1
so has part: feature:3194725-3197757:-1:exon
so has part: feature:3193475-3193533:-1:exon
so has part: feature:3193282-3193370:-1:exon
so has part: feature:3192771-3193042:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3194725-3197757:-1:exon

position:3194725:-1
position: 3194725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3193475-3193533:-1:exon

position:3193475:-1
position: 3193475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3193533:-1
position: 3193533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3193282-3193370:-1:exon

position:3193282:-1
position: 3193282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3193370:-1
position: 3193370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3192771-3193042:-1:exon

position:3193042:-1
position: 3193042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116794421
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794421
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-10-like
translation: MGAEVGSRRGQLFLRSLLFLLLAGPPAGGQLRYAVPEELEHGAFVANLGEDLGLDVSTLSARRFRIVSRAGARQHLEVNLENGILFVNERIDREEVCEAGGTCLLHLQLLVESPLELYRVEVEVLDINDHAPTFPWQEYVLEVAESAVLGARFPLESAQDPDVGTNSVHTYRLSPNGFFSLEVQTRSDASKFAELVLERALDREQQRLHRVLLTALDGGVPERSGTAHILVTVLDANDNVPAFDQPSYGVSLPEDAPAGTLVIQLNATDLDEGPNGEIEYSFSGHAPPRVRELFHIEPRSGQVLLKGRLDYERASLHELYVQAKDRGPSAVAVHCRVLVHLLDVNDNAPEVTLTSVSTPVLEDAPPGTVIAVISVLDRDSGDNGRVSCEVGPNVPFELRSSFRNYYTLVTTQALDREVVPEYNVSITARDMGSPALLTRSTLTVPVSDVNDNAPRFLQPSYSVYVMENNAPGASICSVSALDPDCQQNAYLSYSIADGHIHGMPVGTYVSINSDSGHMYALRSLDYEQIRSFQIQVQAQDAGFPPLSANVTVHIFVLDQNDNAPVIVSPLPHNGSVATELVPRSARPGYLVGTVSAVDADAGLNSRLSYQLLQATDFTLFSVAPDTGELRTLRSFLEQDSTRQRLVVQVRDGGQPALSATVSLLLSVVETMPQTLSDFSEFSLPPEVSSSSPLTLYLLVSLGSISFTFLLAILILTAIRCRGERRSRQGDSCSPPRCHCCPGSRPSSDGLKTSNLTAQPPAGTAAATCLDVPAGGPPGYCYKVCLGPESAQSDFMFLKPCSPPRNNEKDPGKRSRPDQHLQVSKEVKQPNTDWLPPSTQRPTLKSSQSLEDVGEIRRALQKEHERLCTLVTPVSEFQKASAGPNSIWTSQYNPLYPGHIPALDYQHNVYIPGTPTLLSSKDGPLFPGRENKNSFSTFGKRKKMTTYCDMHDSVVINNDLK
SIO_010081: LOC116794421
subclass of: SO_0000673
so part of: LOC116794421
location: complement(join(3192783..3193042,3193282..3193370,3193475..3193533,3194725..3197199))
location: region:3192783-3197199:-1
so has part: feature:3194725-3197199:-1:exon
so has part: feature:3193475-3193533:-1:exon
so has part: feature:3193282-3193370:-1:exon
so has part: feature:3192783-3193042:-1:exon

XP_032558971.1
type: Protein
SIO_000068: ncbiprotein

position:3192783:-1
position: 3192783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3197199:-1
position: 3197199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3194725-3197199:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3193475-3193533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3193282-3193370:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3192783-3193042:-1:exon

ZMAT2
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: ZMAT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3206684..3217271)
location: region:3206684-3217271:-1
so has part: feature:3206684-3217271:-1:exon
subclass of: SO_0000010

116794422
type: Gene
SIO_000068: ncbigene

position:3206684:-1
position: 3206684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3217271:-1
position: 3217271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3206684-3217271:-1:exon

ZMAT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ZMAT2
product: zinc finger matrin-type 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 43 ESTs, 4 long SRA reads, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_032703081.1
SIO_010081: ZMAT2
subclass of: SO_0000673
so part of: ZMAT2
location: complement(join(3206684..3208150,3209611..3209756,3211664..3211737,3212734..3212857,3213291..3213384,3217155..3217271))
location: region:3206684-3217271:-1
so has part: feature:3217155-3217271:-1:exon
so has part: feature:3213291-3213384:-1:exon
so has part: feature:3212734-3212857:-1:exon
so has part: feature:3211664-3211737:-1:exon
so has part: feature:3209611-3209756:-1:exon
so has part: feature:3206684-3208150:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3217155-3217271:-1:exon

position:3217155:-1
position: 3217155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3213291-3213384:-1:exon

position:3213291:-1
position: 3213291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3213384:-1
position: 3213384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3212734-3212857:-1:exon

position:3212734:-1
position: 3212734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3212857:-1
position: 3212857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3211664-3211737:-1:exon