Chiroxiphia lanceolata isolate bChiLan1 chromosome 14, bChiLan1.pri, whole genome shotgun sequence.
type: Entry
definition: Chiroxiphia lanceolata isolate bChiLan1 chromosome 14, bChiLan1.pri, whole genome shotgun sequence.
sequence version: NC_045650.1
sequence date: 2020-02-29
sequence: sequence
division: CON
label: NC_045650.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA603801
dblink: SAMN12620979
keyword: WGS
keyword: RefSeq
source: Chiroxiphia lanceolata (lance-tailed manakin)
organism: Chiroxiphia lanceolata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Pipridae; Chiroxiphia.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020546.1.\nAssembly name: bChiLan1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/01/03. The original whole-genome shotgun project has the\naccession WNMC00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 08-OCT-2019\nAssembly Method :: FALCON v. DNANexus 1.9.0; FALCON-Unzip v.\n DNANexus 1.0.6; purge_haplotigs v.\n v1.0.3+ 1.Nov.2018; scaff10x v. 4.1.0;\n Bionano Solve DLS v. 3.2.1; Salsa HiC v.\n 2.2; Arrow smrtanalysis Pacbio polishing\n & gap filling v. 6.0.0.47841; longranger\n align v. 2.2.2; freebayes Illumina\n polishing v. 1.3.1; gEVAL manual curation\n v. 2019-10-08; VGP assembly pipeline v.\n 1.5\nAssembly Name :: bChiLan1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 67.75x\nSequencing Technology :: PacBio Sequel I CLR; llumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Chiroxiphia lanceolata Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 20729622
topology: linear
so has quality: SO_0000987
location: 1..20729622
location: region:1-20729622:1
RO_0002162: 296741

NC_045650
type: RefSeq
SIO_000068: refseq

PRJNA603801
type: BioProject
SIO_000068: bioproject

SAMN12620979
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20729622:1
position: 20729622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-20729622:1:source
so part of: sequence
organism: Chiroxiphia lanceolata
mol type: genomic DNA
isolate: bChiLan1
chromosome: 14
sex: female
tissue type: isolated red blood cells
dev stage: adult
country: Panama: Isla Boca Btava
lat lon: 8.2166658 N 82.2666656 W
collection date: 14-Apr-2017
collected by: Emily DuVal

296741
type: Taxonomy
SIO_000068: taxonomy

LOC116793911
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793911
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 12333..14956
location: region:12333-14956:1
so has part: feature:12333-14956:1:exon
subclass of: SO_0000011

116793911
type: Gene
SIO_000068: ncbigene

position:12333:1
position: 12333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14956:1
position: 14956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12333-14956:1:exon

LOC116793911
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116793911
product: uncharacterized LOC116793911
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004359630.1
SIO_010081: LOC116793911
subclass of: SO_0000673
so part of: LOC116793911
location: join(12333..12343,13229..13352,14785..14956)
location: region:12333-14956:1
so has part: feature:12333-12343:1:exon
so has part: feature:13229-13352:1:exon
so has part: feature:14785-14956:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12333-12343:1:exon

position:12343:1
position: 12343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13229-13352:1:exon

position:13229:1
position: 13229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13352:1
position: 13352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14785-14956:1:exon

position:14785:1
position: 14785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116793910
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793910
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(20137..45504)
location: region:20137-45504:-1
so has part: feature:20137-45504:-1:exon
subclass of: SO_0000011

116793910
type: Gene
SIO_000068: ncbigene

position:20137:-1
position: 20137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45504:-1
position: 45504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20137-45504:-1:exon

LOC116793910
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116793910
product: uncharacterized LOC116793910, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004359629.1
SIO_010081: LOC116793910
subclass of: SO_0000673
so part of: LOC116793910
location: complement(join(20137..20387,21874..21925,25683..25811,27346..27580,28047..28211,28574..28762,30165..30343,30798..30906))
location: region:20137-30906:-1
so has part: feature:30798-30906:-1:exon
so has part: feature:30165-30343:-1:exon
so has part: feature:28574-28762:-1:exon
so has part: feature:28047-28211:-1:exon
so has part: feature:27346-27580:-1:exon
so has part: feature:25683-25811:-1:exon
so has part: feature:21874-21925:-1:exon
so has part: feature:20137-20387:-1:exon

position:30906:-1
position: 30906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30798-30906:-1:exon

position:30798:-1
position: 30798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:30165-30343:-1:exon

position:30165:-1
position: 30165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30343:-1
position: 30343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:28574-28762:-1:exon

position:28574:-1
position: 28574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28762:-1
position: 28762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:28047-28211:-1:exon

position:28047:-1
position: 28047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28211:-1
position: 28211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:27346-27580:-1:exon

position:27346:-1
position: 27346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27580:-1
position: 27580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:25683-25811:-1:exon

position:25683:-1
position: 25683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25811:-1
position: 25811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:21874-21925:-1:exon

position:21874:-1
position: 21874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21925:-1
position: 21925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:20137-20387:-1:exon

position:20387:-1
position: 20387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116793914
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793914
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 20521..29489
location: region:20521-29489:1
so has part: feature:20521-29489:1:exon
subclass of: SO_0000011

116793914
type: Gene
SIO_000068: ncbigene

position:20521:1
position: 20521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29489:1
position: 29489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20521-29489:1:exon

LOC116793914
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116793914
product: uncharacterized LOC116793914
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004359632.1
SIO_010081: LOC116793914
subclass of: SO_0000673
so part of: LOC116793914
location: join(20521..20643,23693..23696,29479..29489)
location: region:20521-29489:1
so has part: feature:20521-20643:1:exon
so has part: feature:23693-23696:1:exon
so has part: feature:29479-29489:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20521-20643:1:exon

position:20643:1
position: 20643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:23693-23696:1:exon

position:23693:1
position: 23693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23696:1
position: 23696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:29479-29489:1:exon

position:29479:1
position: 29479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116793910
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116793910
product: uncharacterized LOC116793910, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004359628.1
SIO_010081: LOC116793910
subclass of: SO_0000673
so part of: LOC116793910
location: complement(join(22644..23313,25683..25811,27346..27580,28047..28211,28574..28762,30165..30343,45494..45504))
location: region:22644-45504:-1
so has part: feature:45494-45504:-1:exon
so has part: feature:30165-30343:-1:exon
so has part: feature:28574-28762:-1:exon
so has part: feature:28047-28211:-1:exon
so has part: feature:27346-27580:-1:exon
so has part: feature:25683-25811:-1:exon
so has part: feature:22644-23313:-1:exon

position:22644:-1
position: 22644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45494-45504:-1:exon

position:45494:-1
position: 45494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:30165-30343:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28574-28762:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:28047-28211:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27346-27580:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:25683-25811:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22644-23313:-1:exon

position:23313:-1
position: 23313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116793910
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116793910
product: uncharacterized LOC116793910, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004359627.1
SIO_010081: LOC116793910
subclass of: SO_0000673
so part of: LOC116793910
location: complement(join(22644..23313,25683..25811,27346..27580,28047..28211,28574..28762,30165..30343,30798..30906))
location: region:22644-30906:-1
so has part: feature:30798-30906:-1:exon
so has part: feature:30165-30343:-1:exon
so has part: feature:28574-28762:-1:exon
so has part: feature:28047-28211:-1:exon
so has part: feature:27346-27580:-1:exon
so has part: feature:25683-25811:-1:exon
so has part: feature:22644-23313:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30798-30906:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:30165-30343:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28574-28762:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:28047-28211:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27346-27580:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:25683-25811:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22644-23313:-1:exon

LOC116793912
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793912
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(41842..44581)
location: region:41842-44581:-1
so has part: feature:41842-44581:-1:exon
subclass of: SO_0000011

116793912
type: Gene
SIO_000068: ncbigene

position:41842:-1
position: 41842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44581:-1
position: 44581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41842-44581:-1:exon

LOC116793912
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116793912
product: uncharacterized LOC116793912
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004359631.1
SIO_010081: LOC116793912
subclass of: SO_0000673
so part of: LOC116793912
location: complement(join(41842..42277,43244..43360,44321..44581))
location: region:41842-44581:-1
so has part: feature:44321-44581:-1:exon
so has part: feature:43244-43360:-1:exon
so has part: feature:41842-42277:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:44321-44581:-1:exon

position:44321:-1
position: 44321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:43244-43360:-1:exon

position:43244:-1
position: 43244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43360:-1
position: 43360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:41842-42277:-1:exon

position:42277:-1
position: 42277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116793702
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793702
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(62959..65119)
location: region:62959-65119:-1
so has part: feature:62959-65119:-1:exon
subclass of: SO_0000011

116793702
type: Gene
SIO_000068: ncbigene

position:62959:-1
position: 62959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65119:-1
position: 65119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62959-65119:-1:exon

LOC116793702
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116793702
product: uncharacterized LOC116793702
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004359569.1
SIO_010081: LOC116793702
subclass of: SO_0000673
so part of: LOC116793702
location: complement(join(62959..63190,64348..64486,64830..65119))
location: region:62959-65119:-1
so has part: feature:64830-65119:-1:exon
so has part: feature:64348-64486:-1:exon
so has part: feature:62959-63190:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64830-65119:-1:exon

position:64830:-1
position: 64830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:64348-64486:-1:exon

position:64348:-1
position: 64348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64486:-1
position: 64486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:62959-63190:-1:exon

position:63190:-1
position: 63190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C14H8orf48
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: C14H8orf48
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(65745..110170)
location: region:65745-110170:-1
so has part: feature:65745-110170:-1:exon
subclass of: SO_0000010

116793699
type: Gene
SIO_000068: ncbigene

position:65745:-1
position: 65745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110170:-1
position: 110170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65745-110170:-1:exon

C14H8orf48
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: C14H8orf48
product: chromosome 14 C8orf48 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032701700.1
SIO_010081: C14H8orf48
subclass of: SO_0000673
so part of: C14H8orf48
location: complement(join(65745..66909,94310..94394,95475..95627,97095..97327,105360..105503,107799..109630))
location: region:65745-109630:-1
so has part: feature:107799-109630:-1:exon
so has part: feature:105360-105503:-1:exon
so has part: feature:97095-97327:-1:exon
so has part: feature:95475-95627:-1:exon
so has part: feature:94310-94394:-1:exon
so has part: feature:65745-66909:-1:exon

position:109630:-1
position: 109630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107799-109630:-1:exon

position:107799:-1
position: 107799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:105360-105503:-1:exon

position:105360:-1
position: 105360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105503:-1
position: 105503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:97095-97327:-1:exon

position:97095:-1
position: 97095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97327:-1
position: 97327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:95475-95627:-1:exon

position:95475:-1
position: 95475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95627:-1
position: 95627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:94310-94394:-1:exon

position:94310:-1
position: 94310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94394:-1
position: 94394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:65745-66909:-1:exon

position:66909:-1
position: 66909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C14H8orf48
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: C14H8orf48
product: chromosome 14 C8orf48 homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032701701.1
SIO_010081: C14H8orf48
subclass of: SO_0000673
so part of: C14H8orf48
location: complement(join(65748..66565,66691..66909,94310..94394,95475..95627,97095..97327,105360..105503,107799..109630))
location: region:65748-109630:-1
so has part: feature:107799-109630:-1:exon
so has part: feature:105360-105503:-1:exon
so has part: feature:97095-97327:-1:exon
so has part: feature:95475-95627:-1:exon
so has part: feature:94310-94394:-1:exon
so has part: feature:66691-66909:-1:exon
so has part: feature:65748-66565:-1:exon

position:65748:-1
position: 65748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107799-109630:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105360-105503:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97095-97327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95475-95627:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94310-94394:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:66691-66909:-1:exon

position:66691:-1
position: 66691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:65748-66565:-1:exon

position:66565:-1
position: 66565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C14H8orf48
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: C14H8orf48
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C8orf48 homolog isoform X2
translation: MELSQSYNSSALDYSEDTFESVSEEEEIKPSGSCCPTEDLEGSDVLESTSWLAGQSHAEEQSEGVDSAALERVAIGKWIDAMRRWRDLKNKEAEVKQDNSVRKTHGEIPELFDGELDTLRSFCTRKINGMNQQLSPEQGNMGKARKLQDGVPAVKTGTRDGNCIVPGQLMNRILLENTRETVKQVTEAQIHEASSCPDCQKKEAELARIAFVRKKKALMESALIQEKLEEQIYSRNMLTLLGETLRSFPKPSEDPRALWQRLKEGKAQQHQGSELESNLSRRPAEPERLMPKKCLPGRTQILNHTWKRRIQLVPSVLHIPVTLIPLFAH
SIO_010081: C14H8orf48
subclass of: SO_0000673
so part of: C14H8orf48
location: complement(join(66710..66909,94310..94394,95475..95627,97095..97327,105360..105503,107799..107973))
location: region:66710-107973:-1
so has part: feature:107799-107973:-1:exon
so has part: feature:105360-105503:-1:exon
so has part: feature:97095-97327:-1:exon
so has part: feature:95475-95627:-1:exon
so has part: feature:94310-94394:-1:exon
so has part: feature:66710-66909:-1:exon

XP_032557591.1
type: Protein
SIO_000068: ncbiprotein

position:66710:-1
position: 66710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107973:-1
position: 107973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107799-107973:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105360-105503:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97095-97327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95475-95627:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94310-94394:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:66710-66909:-1:exon

C14H8orf48
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: C14H8orf48
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C8orf48 homolog isoform X2
translation: MELSQSYNSSALDYSEDTFESVSEEEEIKPSGSCCPTEDLEGSDVLESTSWLAGQSHAEEQSEGVDSAALERVAIGKWIDAMRRWRDLKNKEAEVKQDNSVRKTHGEIPELFDGELDTLRSFCTRKINGMNQQLSPEQGNMGKARKLQDGVPAVKTGTRDGNCIVPGQLMNRILLENTRETVKQVTEAQIHEASSCPDCQKKEAELARIAFVRKKKALMESALIQEKLEEQIYSRNMLTLLGETLRSFPKPSEDPRALWQRLKEGKAQQHQGSELESNLSRRPAEPERLMPKKCLPGRTQILNHTWKRRIQLVPSVLHIPVTLIPLFAH
SIO_010081: C14H8orf48
subclass of: SO_0000673
so part of: C14H8orf48
location: complement(join(66710..66909,94310..94394,95475..95627,97095..97327,105360..105503,107799..107973))
location: region:66710-107973:-1
so has part: feature:107799-107973:-1:exon
so has part: feature:105360-105503:-1:exon
so has part: feature:97095-97327:-1:exon
so has part: feature:95475-95627:-1:exon
so has part: feature:94310-94394:-1:exon
so has part: feature:66710-66909:-1:exon

XP_032557592.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107799-107973:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105360-105503:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97095-97327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95475-95627:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94310-94394:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:66710-66909:-1:exon

C14H8orf48
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: C14H8orf48
product: chromosome 14 C8orf48 homolog, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032701710.1
SIO_010081: C14H8orf48
subclass of: SO_0000673
so part of: C14H8orf48
location: complement(join(75263..75306,94310..94394,95475..95627,97095..97327,105360..105503,107799..109630))
location: region:75263-109630:-1
so has part: feature:107799-109630:-1:exon
so has part: feature:105360-105503:-1:exon
so has part: feature:97095-97327:-1:exon
so has part: feature:95475-95627:-1:exon
so has part: feature:94310-94394:-1:exon
so has part: feature:75263-75306:-1:exon

position:75263:-1
position: 75263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107799-109630:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105360-105503:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97095-97327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95475-95627:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94310-94394:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:75263-75306:-1:exon

position:75306:-1
position: 75306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C14H8orf48
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: C14H8orf48
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C8orf48 homolog isoform X10
translation: MELSQSYNSSALDYSEDTFESVSEEEEIKPSGSCCPTEDLEGSDVLESTSWLAGQSHAEEQSEGVDSAALERVAIGKWIDAMRRWRDLKNKEAEVKQDNSVRKTHGEIPELFDGELDTLRSFCTRKINGMNQQLSPEQGNMGKARKLQDGVPAVKTGTRDGNCIVPGQLMNRILLENTRETVKQVTEAQIHEASSCPDCQKKEAELARIAFVRKKKALMESALIQEKLEEQIYSRNMLTLLGETLRSFPKPSEDPRALWQRLKDQKPPEEKT
SIO_010081: C14H8orf48
subclass of: SO_0000673
so part of: C14H8orf48
location: complement(join(75278..75306,94310..94394,95475..95627,97095..97327,105360..105503,107799..107973))
location: region:75278-107973:-1
so has part: feature:107799-107973:-1:exon
so has part: feature:105360-105503:-1:exon
so has part: feature:97095-97327:-1:exon
so has part: feature:95475-95627:-1:exon
so has part: feature:94310-94394:-1:exon
so has part: feature:75278-75306:-1:exon

XP_032557601.1
type: Protein
SIO_000068: ncbiprotein

position:75278:-1
position: 75278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107799-107973:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105360-105503:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97095-97327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95475-95627:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94310-94394:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:75278-75306:-1:exon

LOC116793701
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793701
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 79495..88726
location: region:79495-88726:1
so has part: feature:79495-88726:1:exon
subclass of: SO_0000011

116793701
type: Gene
SIO_000068: ncbigene

position:79495:1
position: 79495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88726:1
position: 88726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79495-88726:1:exon

LOC116793701
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116793701
product: uncharacterized LOC116793701, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004359567.1
SIO_010081: LOC116793701
subclass of: SO_0000673
so part of: LOC116793701
location: join(79495..79842,83522..88726)
location: region:79495-88726:1
so has part: feature:79495-79842:1:exon
so has part: feature:83522-88726:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:79495-79842:1:exon

position:79842:1
position: 79842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:83522-88726:1:exon

position:83522:1
position: 83522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116793701
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116793701
product: uncharacterized LOC116793701, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004359568.1
SIO_010081: LOC116793701
subclass of: SO_0000673
so part of: LOC116793701
location: join(79495..79842,86637..88726)
location: region:79495-88726:1
so has part: feature:79495-79842:1:exon
so has part: feature:86637-88726:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:79495-79842:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86637-88726:1:exon

position:86637:1
position: 86637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C14H8orf48
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 296741
gene: C14H8orf48
product: chromosome 14 C8orf48 homolog, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004359566.1
SIO_010081: C14H8orf48
so part of: C14H8orf48
location: complement(join(81172..81310,84692..84910,94310..94394,95475..95627,97095..97327,105360..105503,107799..109630))
location: region:81172-109630:-1
so has part: feature:107799-109630:-1:exon
so has part: feature:105360-105503:-1:exon
so has part: feature:97095-97327:-1:exon
so has part: feature:95475-95627:-1:exon
so has part: feature:94310-94394:-1:exon
so has part: feature:84692-84910:-1:exon
so has part: feature:81172-81310:-1:exon

position:81172:-1
position: 81172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107799-109630:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105360-105503:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97095-97327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95475-95627:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94310-94394:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:84692-84910:-1:exon

position:84692:-1
position: 84692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84910:-1
position: 84910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:81172-81310:-1:exon

position:81310:-1
position: 81310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C14H8orf48
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: C14H8orf48
product: chromosome 14 C8orf48 homolog, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032701703.1
SIO_010081: C14H8orf48
subclass of: SO_0000673
so part of: C14H8orf48
location: complement(join(84521..84910,94310..94394,95475..95627,97095..97327,105360..105503,107799..109630))
location: region:84521-109630:-1
so has part: feature:107799-109630:-1:exon
so has part: feature:105360-105503:-1:exon
so has part: feature:97095-97327:-1:exon
so has part: feature:95475-95627:-1:exon
so has part: feature:94310-94394:-1:exon
so has part: feature:84521-84910:-1:exon

position:84521:-1
position: 84521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107799-109630:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105360-105503:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97095-97327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95475-95627:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94310-94394:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:84521-84910:-1:exon

C14H8orf48
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: C14H8orf48
product: chromosome 14 C8orf48 homolog, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032701709.1
SIO_010081: C14H8orf48
subclass of: SO_0000673
so part of: C14H8orf48
location: complement(join(84521..84910,94300..94394,95475..95627,97095..97327,105360..105503,107799..109630))
location: region:84521-109630:-1
so has part: feature:107799-109630:-1:exon
so has part: feature:105360-105503:-1:exon
so has part: feature:97095-97327:-1:exon
so has part: feature:95475-95627:-1:exon
so has part: feature:94300-94394:-1:exon
so has part: feature:84521-84910:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:107799-109630:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105360-105503:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97095-97327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95475-95627:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94300-94394:-1:exon

position:94300:-1
position: 94300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:84521-84910:-1:exon

C14H8orf48
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: C14H8orf48
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C8orf48 homolog isoform X3
translation: MELSQSYNSSALDYSEDTFESVSEEEEIKPSGSCCPTEDLEGSDVLESTSWLAGQSHAEEQSEGVDSAALERVAIGKWIDAMRRWRDLKNKEAEVKQDNSVRKTHGEIPELFDGELDTLRSFCTRKINGMNQQLSPEQGNMGKARKLQDGVPAVKTGTRDGNCIVPGQLMNRILLENTRETVKQVTEAQIHEASSCPDCQKKEAELARIAFVRKKKALMESALIQEKLEEQIYSRNMLTLLGETLRSFPKPSEDPRALWQRLKGRSKFGDVWNLQLHQKDEGQESHELLHLPCQWGADFSSLIFEELSLPLAS
SIO_010081: C14H8orf48
subclass of: SO_0000673
so part of: C14H8orf48
location: complement(join(84759..84910,94310..94394,95475..95627,97095..97327,105360..105503,107799..107973))
location: region:84759-107973:-1
so has part: feature:107799-107973:-1:exon
so has part: feature:105360-105503:-1:exon
so has part: feature:97095-97327:-1:exon
so has part: feature:95475-95627:-1:exon
so has part: feature:94310-94394:-1:exon
so has part: feature:84759-84910:-1:exon

XP_032557594.1
type: Protein
SIO_000068: ncbiprotein

position:84759:-1
position: 84759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107799-107973:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105360-105503:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97095-97327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95475-95627:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94310-94394:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:84759-84910:-1:exon

C14H8orf48
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: C14H8orf48
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C8orf48 homolog isoform X9
translation: MELSQSYNSSALDYSEDTFESVSEEEEIKPSGSCCPTEDLEGSDVLESTSWLAGQSHAEEQSEGVDSAALERVAIGKWIDAMRRWRDLKNKEAEVKQDNSVRKTHGEIPELFDGELDTLRSFCTRKINGMNQQLSPEQGNMGKARKLQDGVPAVKTGTRDGNCIVPGQLMNRILLENTRETVKQVTEAQIHEASSCPDCQKKEAELARIAFVRKKKALMESALIQEKLEEQIYSRNMLTLLGETLRSFPKPSEDPRALWQRLKGQKMKEQVW
SIO_010081: C14H8orf48
subclass of: SO_0000673
so part of: C14H8orf48
location: complement(join(84892..84910,94300..94394,95475..95627,97095..97327,105360..105503,107799..107973))
location: region:84892-107973:-1
so has part: feature:107799-107973:-1:exon
so has part: feature:105360-105503:-1:exon
so has part: feature:97095-97327:-1:exon
so has part: feature:95475-95627:-1:exon
so has part: feature:94300-94394:-1:exon
so has part: feature:84892-84910:-1:exon

XP_032557600.1
type: Protein
SIO_000068: ncbiprotein

position:84892:-1
position: 84892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107799-107973:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105360-105503:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97095-97327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95475-95627:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94300-94394:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:84892-84910:-1:exon

C14H8orf48
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: C14H8orf48
product: chromosome 14 C8orf48 homolog, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032701707.1
SIO_010081: C14H8orf48
subclass of: SO_0000673
so part of: C14H8orf48
location: complement(join(85626..86647,94300..94394,95475..95627,97095..97327,105360..105503,108094..109630))
location: region:85626-109630:-1
so has part: feature:108094-109630:-1:exon
so has part: feature:105360-105503:-1:exon
so has part: feature:97095-97327:-1:exon
so has part: feature:95475-95627:-1:exon
so has part: feature:94300-94394:-1:exon
so has part: feature:85626-86647:-1:exon

position:85626:-1
position: 85626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108094-109630:-1:exon

position:108094:-1
position: 108094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:105360-105503:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97095-97327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95475-95627:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94300-94394:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:85626-86647:-1:exon

position:86647:-1
position: 86647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C14H8orf48
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: C14H8orf48
product: chromosome 14 C8orf48 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032701699.1
SIO_010081: C14H8orf48
subclass of: SO_0000673
so part of: C14H8orf48
location: complement(join(85639..86647,94300..94394,95475..95627,97095..97327,105360..105503,107799..108198,110122..110170))
location: region:85639-110170:-1
so has part: feature:110122-110170:-1:exon
so has part: feature:107799-108198:-1:exon
so has part: feature:105360-105503:-1:exon
so has part: feature:97095-97327:-1:exon
so has part: feature:95475-95627:-1:exon
so has part: feature:94300-94394:-1:exon
so has part: feature:85639-86647:-1:exon

position:85639:-1
position: 85639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110122-110170:-1:exon

position:110122:-1
position: 110122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:107799-108198:-1:exon

position:108198:-1
position: 108198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:105360-105503:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97095-97327:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:95475-95627:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94300-94394:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:85639-86647:-1:exon

C14H8orf48
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: C14H8orf48
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C8orf48 homolog isoform X1
translation: MELSQSYNSSALDYSEDTFESVSEEEEIKPSGSCCPTEDLEGSDVLESTSWLAGQSHAEEQSEGVDSAALERVAIGKWIDAMRRWRDLKNKEAEVKQDNSVRKTHGEIPELFDGELDTLRSFCTRKINGMNQQLSPEQGNMGKARKLQDGVPAVKTGTRDGNCIVPGQLMNRILLENTRETVKQVTEAQIHEASSCPDCQKKEAELARIAFVRKKKALMESALIQEKLEEQIYSRNMLTLLGETLRSFPKPSEDPRALWQRLKGQKIYQIPEGKIKYEGFKVFRQLVLDWTAQEGAGMSSVTPFLRQFRYVAFQNQNKNAFKILNLQSSACAPTAFWGRSCFYGEIPSKQYVRTLLMALLQL
SIO_010081: C14H8orf48
subclass of: SO_0000673
so part of: C14H8orf48
location: complement(join(86359..86647,94300..94394,95475..95627,97095..97327,105360..105503,107799..107973))
location: region:86359-107973:-1
so has part: feature:107799-107973:-1:exon
so has part: feature:105360-105503:-1:exon
so has part: feature:97095-97327:-1:exon
so has part: feature:95475-95627:-1:exon
so has part: feature:94300-94394:-1:exon
so has part: feature:86359-86647:-1:exon

XP_032557590.1
type: Protein
SIO_000068: ncbiprotein

position:86359:-1
position: 86359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107799-107973:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105360-105503:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97095-97327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95475-95627:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94300-94394:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86359-86647:-1:exon

C14H8orf48
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: C14H8orf48
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C8orf48 homolog isoform X7
translation: MRRWRDLKNKEAEVKQDNSVRKTHGEIPELFDGELDTLRSFCTRKINGMNQQLSPEQGNMGKARKLQDGVPAVKTGTRDGNCIVPGQLMNRILLENTRETVKQVTEAQIHEASSCPDCQKKEAELARIAFVRKKKALMESALIQEKLEEQIYSRNMLTLLGETLRSFPKPSEDPRALWQRLKGQKIYQIPEGKIKYEGFKVFRQLVLDWTAQEGAGMSSVTPFLRQFRYVAFQNQNKNAFKILNLQSSACAPTAFWGRSCFYGEIPSKQYVRTLLMALLQL
SIO_010081: C14H8orf48
subclass of: SO_0000673
so part of: C14H8orf48
location: complement(join(86359..86647,94300..94394,95475..95627,97095..97327,105360..105435))
location: region:86359-105435:-1
so has part: feature:105360-105435:-1:exon
so has part: feature:97095-97327:-1:exon
so has part: feature:95475-95627:-1:exon
so has part: feature:94300-94394:-1:exon
so has part: feature:86359-86647:-1:exon

XP_032557598.1
type: Protein
SIO_000068: ncbiprotein

position:105435:-1
position: 105435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105360-105435:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:97095-97327:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:95475-95627:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94300-94394:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:86359-86647:-1:exon

C14H8orf48
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: C14H8orf48
product: chromosome 14 C8orf48 homolog, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032701711.1
SIO_010081: C14H8orf48
subclass of: SO_0000673
so part of: C14H8orf48
location: complement(join(86607..86647,94310..94394,95475..95627,97095..97327,105360..105503,107799..109630))
location: region:86607-109630:-1
so has part: feature:107799-109630:-1:exon
so has part: feature:105360-105503:-1:exon
so has part: feature:97095-97327:-1:exon
so has part: feature:95475-95627:-1:exon
so has part: feature:94310-94394:-1:exon
so has part: feature:86607-86647:-1:exon

position:86607:-1
position: 86607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107799-109630:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105360-105503:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97095-97327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95475-95627:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94310-94394:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86607-86647:-1:exon

C14H8orf48
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: C14H8orf48
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C8orf48 homolog isoform X11
translation: MELSQSYNSSALDYSEDTFESVSEEEEIKPSGSCCPTEDLEGSDVLESTSWLAGQSHAEEQSEGVDSAALERVAIGKWIDAMRRWRDLKNKEAEVKQDNSVRKTHGEIPELFDGELDTLRSFCTRKINGMNQQLSPEQGNMGKARKLQDGVPAVKTGTRDGNCIVPGQLMNRILLENTRETVKQVTEAQIHEASSCPDCQKKEAELARIAFVRKKKALMESALIQEKLEEQIYSRNMLTLLGETLRSFPKPSEDPRALWQRLKAIRFLRGK
SIO_010081: C14H8orf48
subclass of: SO_0000673
so part of: C14H8orf48
location: complement(join(86622..86647,94310..94394,95475..95627,97095..97327,105360..105503,107799..107973))
location: region:86622-107973:-1
so has part: feature:107799-107973:-1:exon
so has part: feature:105360-105503:-1:exon
so has part: feature:97095-97327:-1:exon
so has part: feature:95475-95627:-1:exon
so has part: feature:94310-94394:-1:exon
so has part: feature:86622-86647:-1:exon

XP_032557602.1
type: Protein
SIO_000068: ncbiprotein

position:86622:-1
position: 86622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107799-107973:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105360-105503:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97095-97327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95475-95627:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94310-94394:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86622-86647:-1:exon

C14H8orf48
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: C14H8orf48
product: chromosome 14 C8orf48 homolog, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032701708.1
SIO_010081: C14H8orf48
subclass of: SO_0000673
so part of: C14H8orf48
location: complement(join(91216..92127,94310..94394,95475..95627,97095..97327,105360..105503,107799..109630))
location: region:91216-109630:-1
so has part: feature:107799-109630:-1:exon
so has part: feature:105360-105503:-1:exon
so has part: feature:97095-97327:-1:exon
so has part: feature:95475-95627:-1:exon
so has part: feature:94310-94394:-1:exon
so has part: feature:91216-92127:-1:exon

position:91216:-1
position: 91216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107799-109630:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105360-105503:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97095-97327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95475-95627:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94310-94394:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91216-92127:-1:exon

position:92127:-1
position: 92127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C14H8orf48
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: C14H8orf48
product: chromosome 14 C8orf48 homolog, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032701706.1
SIO_010081: C14H8orf48
subclass of: SO_0000673
so part of: C14H8orf48
location: complement(join(91216..92127,94300..94394,95475..95627,97095..97327,105360..105503,107799..109630))
location: region:91216-109630:-1
so has part: feature:107799-109630:-1:exon
so has part: feature:105360-105503:-1:exon
so has part: feature:97095-97327:-1:exon
so has part: feature:95475-95627:-1:exon
so has part: feature:94300-94394:-1:exon
so has part: feature:91216-92127:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:107799-109630:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105360-105503:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97095-97327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95475-95627:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94300-94394:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91216-92127:-1:exon

C14H8orf48
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: C14H8orf48
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C8orf48 homolog isoform X6
translation: MELSQSYNSSALDYSEDTFESVSEEEEIKPSGSCCPTEDLEGSDVLESTSWLAGQSHAEEQSEGVDSAALERVAIGKWIDAMRRWRDLKNKEAEVKQDNSVRKTHGEIPELFDGELDTLRSFCTRKINGMNQQLSPEQGNMGKARKLQDGVPAVKTGTRDGNCIVPGQLMNRILLENTRETVKQVTEAQIHEASSCPDCQKKEAELARIAFVRKKKALMESALIQEKLEEQIYSRNMLTLLGETLRSFPKPSEDPRALWQRLKGQKMSSPHQQQIFLLIQRNTLKL
SIO_010081: C14H8orf48
subclass of: SO_0000673
so part of: C14H8orf48
location: complement(join(92067..92127,94300..94394,95475..95627,97095..97327,105360..105503,107799..107973))
location: region:92067-107973:-1
so has part: feature:107799-107973:-1:exon
so has part: feature:105360-105503:-1:exon
so has part: feature:97095-97327:-1:exon
so has part: feature:95475-95627:-1:exon
so has part: feature:94300-94394:-1:exon
so has part: feature:92067-92127:-1:exon

XP_032557597.1
type: Protein
SIO_000068: ncbiprotein

position:92067:-1
position: 92067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107799-107973:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105360-105503:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97095-97327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95475-95627:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94300-94394:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92067-92127:-1:exon

C14H8orf48
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: C14H8orf48
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C8orf48 homolog isoform X8
translation: MELSQSYNSSALDYSEDTFESVSEEEEIKPSGSCCPTEDLEGSDVLESTSWLAGQSHAEEQSEGVDSAALERVAIGKWIDAMRRWRDLKNKEAEVKQDNSVRKTHGEIPELFDGELDTLRSFCTRKINGMNQQLSPEQGNMGKARKLQDGVPAVKTGTRDGNCIVPGQLMNRILLENTRETVKQVTEAQIHEASSCPDCQKKEAELARIAFVRKKKALMESALIQEKLEEQIYSRNMLTLLGETLRSFPKPSEDPRALWQRLKGAPPTSSRFFF
SIO_010081: C14H8orf48
subclass of: SO_0000673
so part of: C14H8orf48
location: complement(join(92093..92127,94310..94394,95475..95627,97095..97327,105360..105503,107799..107973))
location: region:92093-107973:-1
so has part: feature:107799-107973:-1:exon
so has part: feature:105360-105503:-1:exon
so has part: feature:97095-97327:-1:exon
so has part: feature:95475-95627:-1:exon
so has part: feature:94310-94394:-1:exon
so has part: feature:92093-92127:-1:exon

XP_032557599.1
type: Protein
SIO_000068: ncbiprotein

position:92093:-1
position: 92093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107799-107973:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105360-105503:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97095-97327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95475-95627:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94310-94394:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92093-92127:-1:exon

C14H8orf48
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: C14H8orf48
product: chromosome 14 C8orf48 homolog, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032701705.1
SIO_010081: C14H8orf48
subclass of: SO_0000673
so part of: C14H8orf48
location: complement(join(92198..92886,94310..94394,95475..95627,97095..97327,105360..105503,107799..109630))
location: region:92198-109630:-1
so has part: feature:107799-109630:-1:exon
so has part: feature:105360-105503:-1:exon
so has part: feature:97095-97327:-1:exon
so has part: feature:95475-95627:-1:exon
so has part: feature:94310-94394:-1:exon
so has part: feature:92198-92886:-1:exon

position:92198:-1
position: 92198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107799-109630:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105360-105503:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97095-97327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95475-95627:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94310-94394:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92198-92886:-1:exon

position:92886:-1
position: 92886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C14H8orf48
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: C14H8orf48
product: chromosome 14 C8orf48 homolog, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032701704.1
SIO_010081: C14H8orf48
subclass of: SO_0000673
so part of: C14H8orf48
location: complement(join(92198..92886,94300..94394,95475..95627,97095..97327,105360..105503,107799..109630))
location: region:92198-109630:-1
so has part: feature:107799-109630:-1:exon
so has part: feature:105360-105503:-1:exon
so has part: feature:97095-97327:-1:exon
so has part: feature:95475-95627:-1:exon
so has part: feature:94300-94394:-1:exon
so has part: feature:92198-92886:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:107799-109630:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105360-105503:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97095-97327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95475-95627:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94300-94394:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92198-92886:-1:exon

C14H8orf48
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: C14H8orf48
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C8orf48 homolog isoform X4
translation: MELSQSYNSSALDYSEDTFESVSEEEEIKPSGSCCPTEDLEGSDVLESTSWLAGQSHAEEQSEGVDSAALERVAIGKWIDAMRRWRDLKNKEAEVKQDNSVRKTHGEIPELFDGELDTLRSFCTRKINGMNQQLSPEQGNMGKARKLQDGVPAVKTGTRDGNCIVPGQLMNRILLENTRETVKQVTEAQIHEASSCPDCQKKEAELARIAFVRKKKALMESALIQEKLEEQIYSRNMLTLLGETLRSFPKPSEDPRALWQRLKGQKICSISVPYLLCSALPVSPEPLEFLSHLQT
SIO_010081: C14H8orf48
subclass of: SO_0000673
so part of: C14H8orf48
location: complement(join(92799..92886,94300..94394,95475..95627,97095..97327,105360..105503,107799..107973))
location: region:92799-107973:-1
so has part: feature:107799-107973:-1:exon
so has part: feature:105360-105503:-1:exon
so has part: feature:97095-97327:-1:exon
so has part: feature:95475-95627:-1:exon
so has part: feature:94300-94394:-1:exon
so has part: feature:92799-92886:-1:exon

XP_032557595.1
type: Protein
SIO_000068: ncbiprotein

position:92799:-1
position: 92799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107799-107973:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105360-105503:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97095-97327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95475-95627:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94300-94394:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92799-92886:-1:exon

C14H8orf48
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: C14H8orf48
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C8orf48 homolog isoform X5
translation: MELSQSYNSSALDYSEDTFESVSEEEEIKPSGSCCPTEDLEGSDVLESTSWLAGQSHAEEQSEGVDSAALERVAIGKWIDAMRRWRDLKNKEAEVKQDNSVRKTHGEIPELFDGELDTLRSFCTRKINGMNQQLSPEQGNMGKARKLQDGVPAVKTGTRDGNCIVPGQLMNRILLENTRETVKQVTEAQIHEASSCPDCQKKEAELARIAFVRKKKALMESALIQEKLEEQIYSRNMLTLLGETLRSFPKPSEDPRALWQRLKDAPSLFLICFALHSLFLPNLWNS
SIO_010081: C14H8orf48
subclass of: SO_0000673
so part of: C14H8orf48
location: complement(join(92816..92886,94310..94394,95475..95627,97095..97327,105360..105503,107799..107973))
location: region:92816-107973:-1
so has part: feature:107799-107973:-1:exon
so has part: feature:105360-105503:-1:exon
so has part: feature:97095-97327:-1:exon
so has part: feature:95475-95627:-1:exon
so has part: feature:94310-94394:-1:exon
so has part: feature:92816-92886:-1:exon

XP_032557596.1
type: Protein
SIO_000068: ncbiprotein

position:92816:-1
position: 92816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107799-107973:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105360-105503:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97095-97327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95475-95627:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94310-94394:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92816-92886:-1:exon

MTMR8
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: MTMR8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 155850..181951
location: region:155850-181951:1
so has part: feature:155850-181951:1:exon
subclass of: SO_0000010

116793761
type: Gene
SIO_000068: ncbigene

position:155850:1
position: 155850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181951:1
position: 181951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155850-181951:1:exon

MTMR8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: MTMR8
product: myotubularin related protein 8
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 10 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032701840.1
SIO_010081: MTMR8
subclass of: SO_0000673
so part of: MTMR8
location: join(155850..155919,157451..157573,158483..158645,160843..161000,162608..162736,164304..164438,166898..167031,168329..168438,169468..169593,171143..171192,171806..172006,172362..172490,173338..173464,173918..180495,181528..181951)
location: region:155850-181951:1
so has part: feature:155850-155919:1:exon
so has part: feature:157451-157573:1:exon
so has part: feature:158483-158645:1:exon
so has part: feature:160843-161000:1:exon
so has part: feature:162608-162736:1:exon
so has part: feature:164304-164438:1:exon
so has part: feature:166898-167031:1:exon
so has part: feature:168329-168438:1:exon
so has part: feature:169468-169593:1:exon
so has part: feature:171143-171192:1:exon
so has part: feature:171806-172006:1:exon
so has part: feature:172362-172490:1:exon
so has part: feature:173338-173464:1:exon
so has part: feature:173918-180495:1:exon
so has part: feature:181528-181951:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:155850-155919:1:exon

position:155919:1
position: 155919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:157451-157573:1:exon

position:157451:1
position: 157451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157573:1
position: 157573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:158483-158645:1:exon

position:158483:1
position: 158483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158645:1
position: 158645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:160843-161000:1:exon

position:160843:1
position: 160843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161000:1
position: 161000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:162608-162736:1:exon

position:162608:1
position: 162608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162736:1
position: 162736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:164304-164438:1:exon

position:164304:1
position: 164304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164438:1
position: 164438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:166898-167031:1:exon

position:166898:1
position: 166898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167031:1
position: 167031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:168329-168438:1:exon

position:168329:1
position: 168329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168438:1
position: 168438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:169468-169593:1:exon

position:169468:1
position: 169468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169593:1
position: 169593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:171143-171192:1:exon

position:171143:1
position: 171143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171192:1
position: 171192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:171806-172006:1:exon

position:171806:1
position: 171806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172006:1
position: 172006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:172362-172490:1:exon

position:172362:1
position: 172362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172490:1
position: 172490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:173338-173464:1:exon

position:173338:1
position: 173338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173464:1
position: 173464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:173918-180495:1:exon

position:173918:1
position: 173918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180495:1
position: 180495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:181528-181951:1:exon

position:181528:1
position: 181528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MTMR8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: MTMR8
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: myotubularin-related protein 8
translation: MDHISTPKVENVKLLDRYANRKVANGTLYLTATHLIYVEASAEVRKETWILHHHIASVEKLPLTTAGYPLLIHCKNFHVAHFVLGQERDCHDVFTSLLKLSQPVKPEELYAFSYNPKMSKENREIGWKLIDLKLDYQRMGIPNDYWEITDVNKDYEVCSTYPPEIVVPRAASKAVVMGSSKFRSRGRIPVLSYLYKENNAALCRCSQPLAGFSARCLEDEQMLQAIREANPGSPFMYVVDTRPKLNAMANRAAGKGYENEDNYENIRFKFIGIENIHVMRSSLQKLLEVCEMKSPSMNDFLTGLENSGWLRHIKAVMDAGVFLAKAVREEKASVLVHCSDGWDRTAQVCSLAGLLLDPFYRTFKGFMVLIEKEWIAMGHKFSHRCGHLDGDPKEVSPVFTQXVECVWQLMQQFPCSFEFNERFLLEIHDHVYSCQFGNFLGTCHKEREDLKIFEKTHSLWPFLLQRKQELRNPLYRGFTAYKELQPNTLPFSFQFWGGMYNRFDKGMHPKQCVLDHLLSCMSQKVQLEDDASELENKLPFVDGPLPGEASSFPRAGHAAPKAPVPNTPQDYGGAATPVLSNGTSPGAGGSAMDQKHKENLSHTTRILVPPTEVSDGNAQHQ
SIO_010081: MTMR8
subclass of: SO_0000673
so part of: MTMR8
location: join(155896..155919,157451..157573,158483..158645,160843..161000,162608..162736,164304..164438,166898..167031,168329..168438,169468..169593,171143..171192,171806..172006,172362..172490,173338..173464,173918..174175)
location: region:155896-174175:1
so has part: feature:155896-155919:1:exon
so has part: feature:157451-157573:1:exon
so has part: feature:158483-158645:1:exon
so has part: feature:160843-161000:1:exon
so has part: feature:162608-162736:1:exon
so has part: feature:164304-164438:1:exon
so has part: feature:166898-167031:1:exon
so has part: feature:168329-168438:1:exon
so has part: feature:169468-169593:1:exon
so has part: feature:171143-171192:1:exon
so has part: feature:171806-172006:1:exon
so has part: feature:172362-172490:1:exon
so has part: feature:173338-173464:1:exon
so has part: feature:173918-174175:1:exon

XP_032557731.1
type: Protein
SIO_000068: ncbiprotein

position:155896:1
position: 155896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174175:1
position: 174175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155896-155919:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:157451-157573:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158483-158645:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:160843-161000:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:162608-162736:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:164304-164438:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:166898-167031:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:168329-168438:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:169468-169593:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:171143-171192:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:171806-172006:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:172362-172490:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:173338-173464:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:173918-174175:1:exon

ASB12
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: ASB12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 182052..188345
location: region:182052-188345:1
so has part: feature:182052-188345:1:exon
subclass of: SO_0000010

116793762
type: Gene
SIO_000068: ncbigene

position:182052:1
position: 182052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188345:1
position: 188345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182052-188345:1:exon

ASB12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ASB12
product: ankyrin repeat and SOCS box containing 12
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032701841.1
SIO_010081: ASB12
subclass of: SO_0000673
so part of: ASB12
location: join(182052..182535,185628..185738,186392..187238,188123..188345)
location: region:182052-188345:1
so has part: feature:182052-182535:1:exon
so has part: feature:185628-185738:1:exon
so has part: feature:186392-187238:1:exon
so has part: feature:188123-188345:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:182052-182535:1:exon

position:182535:1
position: 182535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:185628-185738:1:exon

position:185628:1
position: 185628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185738:1
position: 185738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:186392-187238:1:exon

position:186392:1
position: 186392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187238:1
position: 187238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:188123-188345:1:exon

position:188123:1
position: 188123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ASB12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ASB12
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: ankyrin repeat and SOCS box protein 12
translation: MGDRPPKMSLMDINKMFSRLQPRDDEQRTMGESEELSRAVSEDDCETLHRLLSQDRYKRLINRRSGWGVPSTPLRLAATRGCVQSLRVLLAHGAEVDGLDVKAQTPLXVAVSNGHRECVEALLDAGASPAGSIYNNCSPLLLAARDGNVDILRQLLEHGAEPNVQARLPQWAANSVSCSGPLYLAAAYRHLECFRLLLLHGADPDYNCTDQGVITQIKEPXTLLETCLRHGCHSKFIKLLIDFGANVYLPNVPVDGPARSEGLELLLQARAHPKSLLSQSRLAMRRILKQPGHLPTLRELEIPTVLANYLQHQP
SIO_010081: ASB12
subclass of: SO_0000673
so part of: ASB12
location: join(186427..187238,188123..188256)
location: region:186427-188256:1
so has part: feature:186427-187238:1:exon
so has part: feature:188123-188256:1:exon

XP_032557732.1
type: Protein
SIO_000068: ncbiprotein

position:186427:1
position: 186427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188256:1
position: 188256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186427-187238:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188123-188256:1:exon

AMER1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: AMER1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 192746..200109
location: region:192746-200109:1
so has part: feature:192746-200109:1:exon
subclass of: SO_0000010

116793965
type: Gene
SIO_000068: ncbigene

position:192746:1
position: 192746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200109:1
position: 200109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192746-200109:1:exon

AMER1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: AMER1
product: APC membrane recruitment protein 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032702233.1
SIO_010081: AMER1
subclass of: SO_0000673
so part of: AMER1
location: 192746..200109
location: region:192746-200109:1
so has part: feature:192746-200109:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:192746-200109:1:exon

AMER1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: AMER1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: APC membrane recruitment protein 1
translation: MEMGSLEEQACGDQRREEGGDASPEGANNSXEPQPPPPGKLRKTAFKLFGGKRSICTLPSFFGGRGKGQGKKGLSKCKTHDGLSSATSDRTQPNSPLDVHPGPLPCSRSAQLPGDTGARGNLGQQDNSPPGSIEGCDKKPNGDKSSFPRPKKGLKGFFNSIRRHRKSKAAEGERAELPEWNRDLEEPSSAPGVAVESRGAAESRGAGPVPVPTACPGGEPGCGEAPEPSCPVAEGGSSKGDAVVAVPGDGNAPDTKLEADTATCAEFDRDSLLLAFHPDLMDSEPPCLHSGDLLSLILGDVTSLKSFDSLTGCGDDIAEPDIAESSISVERSREAAKRSSCLVTYQGGGEEMAIPEEAEEYLHQVWDGSMPGDRSYGAQVSRSSLETHASHEGDAHPYMGDPMDGVDLLTPQSDQQESAPNSDEGYYDSTTPGLEDEAGEELKKDRLPRDSYSGDALYEFDTLMSPCHGEESLFEGKGPRPGIFSYFMDFCLPAEKSLIQQMMDQKRGVMETEEEGLAALQKELLYWELQREPVLKRLDVSSKEECPREKQCIECKTRAASSSGKSQSGLGGEQVASHTLNWAVNDGVPVARAENPEWRDFPGTLCPENCYNSQKAPGSCLTELTKNTPGFDSNPDCGLFGDSVPAKAGMFPGYRAHPTPGEPQVGSEPEHAVSFSQALVEFASSGTLFSSLSESLGSSVSSSSFTQNLPALPTMVTFDVVDVEQEGEGECEQHPELSEDIAEAFDDGYGQKESLAECDERMSLGFSLGSFQSCNWGVASLPRHLRLHGLSPSMPAPLSMDRRSRSLDTESLEFELAEPQAARSGPQPCRLWARQEGSRKDSGGARRSRSKEEGELVALEGGLSWPGLQHLQRGSDGGGMELWGFAPVGAMESVWEPSEELGTMSPFPPLSGEALDRQPQEPELPRHALCPSNLPLQPEARRAREAAGSYRYHGEVPRLSRLVPLGEAELPPSFSFACSPEKRSKGKPVGIAQGMPQHPGRNASPAESPERCAEPLKGRGTPGHCQGTALDVTDAE
SIO_010081: AMER1
subclass of: SO_0000673
so part of: AMER1
location: 192845..195954
location: region:192845-195954:1
so has part: feature:192845-195954:1:exon

XP_032558124.1
type: Protein
SIO_000068: ncbiprotein

position:192845:1
position: 192845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195954:1
position: 195954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192845-195954:1:exon

ARHGEF9
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: ARHGEF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 221860..428888
location: region:221860-428888:1
so has part: feature:221860-428888:1:exon
subclass of: SO_0000010

116793673
type: Gene
SIO_000068: ncbigene

position:221860:1
position: 221860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428888:1
position: 428888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221860-428888:1:exon

ARHGEF9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ARHGEF9
product: Cdc42 guanine nucleotide exchange factor 9
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, 2 long SRA reads, 18 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032701633.1
SIO_010081: ARHGEF9
subclass of: SO_0000673
so part of: ARHGEF9
location: join(221860..221994,245370..247752,254674..254821,257265..257374,362483..362662,375298..375489,384403..384581,386971..387203,390931..391060,399266..399397,413558..413801,414514..414582,425006..428888)
location: region:221860-428888:1
so has part: feature:221860-221994:1:exon
so has part: feature:245370-247752:1:exon
so has part: feature:254674-254821:1:exon
so has part: feature:257265-257374:1:exon
so has part: feature:362483-362662:1:exon
so has part: feature:375298-375489:1:exon
so has part: feature:384403-384581:1:exon
so has part: feature:386971-387203:1:exon
so has part: feature:390931-391060:1:exon
so has part: feature:399266-399397:1:exon
so has part: feature:413558-413801:1:exon
so has part: feature:414514-414582:1:exon
so has part: feature:425006-428888:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:221860-221994:1:exon

position:221994:1
position: 221994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:245370-247752:1:exon

position:245370:1
position: 245370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247752:1
position: 247752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:254674-254821:1:exon

position:254674:1
position: 254674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254821:1
position: 254821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:257265-257374:1:exon

position:257265:1
position: 257265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257374:1
position: 257374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:362483-362662:1:exon

position:362483:1
position: 362483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362662:1
position: 362662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:375298-375489:1:exon

position:375298:1
position: 375298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375489:1
position: 375489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:384403-384581:1:exon

position:384403:1
position: 384403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384581:1
position: 384581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:386971-387203:1:exon

position:386971:1
position: 386971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387203:1
position: 387203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:390931-391060:1:exon

position:390931:1
position: 390931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391060:1
position: 391060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:399266-399397:1:exon

position:399266:1
position: 399266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399397:1
position: 399397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:413558-413801:1:exon

position:413558:1
position: 413558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413801:1
position: 413801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:414514-414582:1:exon

position:414514:1
position: 414514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414582:1
position: 414582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:425006-428888:1:exon

position:425006:1
position: 425006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARHGEF9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ARHGEF9
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:384486..384488,aa:OTHER)
product: LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 9
translation: MEVVEHTPLATVPNGYANRIFQANMEEGSTDALEACGAEHCTSSDAIPSEREEVPRYKKTTKGNRIWNFVRRRKGLSTSKDRPQSMILLGVTSEVSELKKPSFMERVRSSKKGRSSRTPKNVDLRASRVQMACDPEEEPPASGQRAIYRVKKLGDSRRPSRHSYAGYIEDFDSSFEDIELNISIPELDATESKCLRDISVRLHSEDNDGNCHRIPARKSESLNFENLKSPAVAEGDNQKRCAVLPQESRRGRSSDVWSYLKGISLTSKDNSKLPDQRAETNFQNLENTTDHSSSYFDFDTRCEENPRQRKKSNGAAKAPHFGGVVRFLTSVAEAARRLRGSSKAFSLDEKRPQRSFRGWGQDVASHREGLVIENESAKAFCTVGACLQSPDSGTWENLSFESLVGKEPMQHCRTTEGSKEVGSSALGSGNDRVNGTSLFPFGPEPSISHLPELADGSFTELNSKDPSEDLIELPQTTLTDMIQNLGSTSEKTQVMGRDLPPSHDLPMNSLDAVDLGHSPAASGDFPAETEAQIHLPLALPTKLDTEDVSCAPVVAKDMDPSPAVAQELSKAELDIQDLRNPELPLQDLSGGELGIQDSGSTPEKAQAVGRDVPPSQDLPVNKLDTVDLGCSPAANGDFSVVTETSIHLPETTATEEIEDTVSALEKSQVMGRDLPPSQDLPVNILDAADLGCSAVADVDFSVVTFLKCSTVKRQVLEQTDGCFKKQGITSFVEQNSVEITEGVEEFNCSSECQPFQVRVSRIVSSGRLKNGKPLSHPPQPSPQVPPFKVLVERCRSEPLSQSTPQGLDQLGGRMQHLLRRRAENEQASKTLKVRGNCRNGGRRWNLFKPGAEKLQISRLISGGSIVSAEAVWDHVTMANRELAFKAGDVIKVLDASNKDWWWGQIDDEEGWFPASFVRLWVNQEDGVEEGTSDVQNGHLDPSADCLCLGRTVQNRDQMRANVINEIMSTERHYIKHLKDICEGYLKQCRKRRDMFSDEQLKXIFGNIEDIXQIQSALSGTWRNSTNNEDPHLSEIGPCFLEHQDGFWIYSEYCNNHLDACMELSKLMKDSRYQHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTAQEHSDYRYVAAALAVMRNVTLQINERKRRLENIDKIAQWQASVLDWEGDDILDRSSELIYTGEMSWIYQPYGRNQQRVFFLFDHQMVLCKKDLIRRDILYYKGRIDMDKYEVVDIDDGRDDDFNVSMKNAFKLHNKETEEMHLFFAKKLEEKLRWLRAFREERKMVKEDEKIGFEISENQKRQAAMTVKKVSKQKGVSYSKSVPPAYPPPQDPLNQGQYMVTDGISQSQVFEFTEPRRSQAPFWQNFSRLTPFKK
SIO_010081: ARHGEF9
subclass of: SO_0000673
so part of: ARHGEF9
location: join(245437..247752,254674..254821,257265..257374,362483..362662,375298..375489,384403..384581,386971..387203,390931..391060,399266..399397,413558..413801,414514..414582,425006..425187)
location: region:245437-425187:1
so has part: feature:245437-247752:1:exon
so has part: feature:254674-254821:1:exon
so has part: feature:257265-257374:1:exon
so has part: feature:362483-362662:1:exon
so has part: feature:375298-375489:1:exon
so has part: feature:384403-384581:1:exon
so has part: feature:386971-387203:1:exon
so has part: feature:390931-391060:1:exon
so has part: feature:399266-399397:1:exon
so has part: feature:413558-413801:1:exon
so has part: feature:414514-414582:1:exon
so has part: feature:425006-425187:1:exon

XP_032557524.1
type: Protein
SIO_000068: ncbiprotein

position:245437:1
position: 245437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425187:1
position: 425187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245437-247752:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254674-254821:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:257265-257374:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:362483-362662:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:375298-375489:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:384403-384581:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:386971-387203:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:390931-391060:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:399266-399397:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:413558-413801:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:414514-414582:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:425006-425187:1:exon

LOC116793674
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793674
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 284569..289207
location: region:284569-289207:1
so has part: feature:284569-289207:1:exon
subclass of: SO_0000011

116793674
type: Gene
SIO_000068: ncbigene

position:284569:1
position: 284569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289207:1
position: 289207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284569-289207:1:exon

LOC116793674
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116793674
product: uncharacterized LOC116793674
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004359556.1
SIO_010081: LOC116793674
subclass of: SO_0000673
so part of: LOC116793674
location: join(284569..284612,285854..285944,288932..289207)
location: region:284569-289207:1
so has part: feature:284569-284612:1:exon
so has part: feature:285854-285944:1:exon
so has part: feature:288932-289207:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:284569-284612:1:exon

position:284612:1
position: 284612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:285854-285944:1:exon

position:285854:1
position: 285854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285944:1
position: 285944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:288932-289207:1:exon

position:288932:1
position: 288932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116793937
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793937
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 449272..450622
location: region:449272-450622:1
so has part: feature:449272-450622:1:exon
subclass of: SO_0000011

116793937
type: Gene
SIO_000068: ncbigene

position:449272:1
position: 449272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450622:1
position: 450622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449272-450622:1:exon

LOC116793937
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116793937
product: uncharacterized LOC116793937
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004359641.1
SIO_010081: LOC116793937
subclass of: SO_0000673
so part of: LOC116793937
location: join(449272..449579,450281..450622)
location: region:449272-450622:1
so has part: feature:449272-449579:1:exon
so has part: feature:450281-450622:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:449272-449579:1:exon

position:449579:1
position: 449579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:450281-450622:1:exon

position:450281:1
position: 450281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116793766
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793766
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 481402..614186
location: region:481402-614186:1
so has part: feature:481402-614186:1:exon
subclass of: SO_0000010

116793766
type: Gene
SIO_000068: ncbigene

position:481402:1
position: 481402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614186:1
position: 614186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481402-614186:1:exon

LOC116793766
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116793766
product: vascular endothelial growth factor receptor kdr-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 long SRA read, 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032701846.1
SIO_010081: LOC116793766
subclass of: SO_0000673
so part of: LOC116793766
location: join(481402..482122,516908..517004,520801..521012,532813..532940,537235..537394,538786..538922,540396..540555,541341..541458,543191..543366,554918..555065,557030..557132,565562..565670,573340..573633,575594..575740,577806..577931,578036..578142,579342..579477,580724..580828,583060..583176,586478..586566,587805..587970,588520..588617,589508..589630,589736..589847,595246..595345,595932..596037,598028..598152,598402..598480,601031..601125,608946..614186)
location: region:481402-614186:1
so has part: feature:481402-482122:1:exon
so has part: feature:516908-517004:1:exon
so has part: feature:520801-521012:1:exon
so has part: feature:532813-532940:1:exon
so has part: feature:537235-537394:1:exon
so has part: feature:538786-538922:1:exon
so has part: feature:540396-540555:1:exon
so has part: feature:541341-541458:1:exon
so has part: feature:543191-543366:1:exon
so has part: feature:554918-555065:1:exon
so has part: feature:557030-557132:1:exon
so has part: feature:565562-565670:1:exon
so has part: feature:573340-573633:1:exon
so has part: feature:575594-575740:1:exon
so has part: feature:577806-577931:1:exon
so has part: feature:578036-578142:1:exon
so has part: feature:579342-579477:1:exon
so has part: feature:580724-580828:1:exon
so has part: feature:583060-583176:1:exon
so has part: feature:586478-586566:1:exon
so has part: feature:587805-587970:1:exon
so has part: feature:588520-588617:1:exon
so has part: feature:589508-589630:1:exon
so has part: feature:589736-589847:1:exon
so has part: feature:595246-595345:1:exon
so has part: feature:595932-596037:1:exon
so has part: feature:598028-598152:1:exon
so has part: feature:598402-598480:1:exon
so has part: feature:601031-601125:1:exon
so has part: feature:608946-614186:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:481402-482122:1:exon

position:482122:1
position: 482122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:516908-517004:1:exon

position:516908:1
position: 516908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517004:1
position: 517004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:520801-521012:1:exon

position:520801:1
position: 520801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521012:1
position: 521012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:532813-532940:1:exon

position:532813:1
position: 532813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532940:1
position: 532940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:537235-537394:1:exon

position:537235:1
position: 537235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537394:1
position: 537394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:538786-538922:1:exon

position:538786:1
position: 538786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538922:1
position: 538922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:540396-540555:1:exon

position:540396:1
position: 540396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540555:1
position: 540555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:541341-541458:1:exon

position:541341:1
position: 541341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541458:1
position: 541458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:543191-543366:1:exon

position:543191:1
position: 543191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543366:1
position: 543366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:554918-555065:1:exon

position:554918:1
position: 554918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555065:1
position: 555065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:557030-557132:1:exon

position:557030:1
position: 557030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557132:1
position: 557132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:565562-565670:1:exon

position:565562:1
position: 565562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565670:1
position: 565670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:573340-573633:1:exon

position:573340:1
position: 573340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573633:1
position: 573633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:575594-575740:1:exon

position:575594:1
position: 575594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575740:1
position: 575740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:577806-577931:1:exon

position:577806:1
position: 577806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577931:1
position: 577931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:578036-578142:1:exon

position:578036:1
position: 578036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578142:1
position: 578142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:579342-579477:1:exon

position:579342:1
position: 579342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579477:1
position: 579477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:580724-580828:1:exon

position:580724:1
position: 580724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:580828:1
position: 580828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:583060-583176:1:exon

position:583060:1
position: 583060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583176:1
position: 583176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:586478-586566:1:exon

position:586478:1
position: 586478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586566:1
position: 586566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:587805-587970:1:exon

position:587805:1
position: 587805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:587970:1
position: 587970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:588520-588617:1:exon

position:588520:1
position: 588520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:588617:1
position: 588617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:589508-589630:1:exon

position:589508:1
position: 589508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:589630:1
position: 589630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:589736-589847:1:exon

position:589736:1
position: 589736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:589847:1
position: 589847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:595246-595345:1:exon

position:595246:1
position: 595246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595345:1
position: 595345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:595932-596037:1:exon

position:595932:1
position: 595932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596037:1
position: 596037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:598028-598152:1:exon

position:598028:1
position: 598028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598152:1
position: 598152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:598402-598480:1:exon

position:598402:1
position: 598402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598480:1
position: 598480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:601031-601125:1:exon

position:601031:1
position: 601031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601125:1
position: 601125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:608946-614186:1:exon

position:608946:1
position: 608946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116793766
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116793766
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vascular endothelial growth factor receptor kdr-like
translation: MLPRPSAVLAVCALQGLLLLHGLAEEELFQKPVLSIAKDHIVLSPGDTLKIKCRGALSVSWVLRGEHQDSPRVHRSSCRNGTGQSCSALVIRRLVANDTGYLTCAHDSHPAREDLMARIYVFVQDYRNPFVEIHPEHPEIIYLLDDKKTVVVPCRVTSPDIRPRLIQYPSSAEINFKRMVWDPMRGFVIPSHAFVYSGVLTCSANINGTVFNSYYLAQRLEGRIQNLALKATPKKLLVGETLHLECKAETFINGRIEFIWTCPRGRHPHPRRAMDQSDVVYKVGSSLTIENVTMEDGGLYICRTFNATRLEANVTVTVYDKPYITVSHKKGPYYEITSGHKSLKLAAKVDAFPRPIVSWYKDGKLIKDNHTCYEPDPLKYRLGIRDVRPKHAGNYTIVLSNPKYGLYKNLTMQLVVTETQIFEKETDFDKIMRVELGSKHKIHCTASGNPEPKIEWKWQPCSLTDTMCKPEGPRVVVQENMVIGNKIRSIENMPMQGDKPKIVSTLTVENSSASGIYSCVASNKVGVEERSVEFYVSDVPSGLQTSPQVTAIVGSDVRLTCRASRYIYTHLVWHLPSPGAAPSDSLIRKTVRYSISLTLVIPNVTKEQSGLYKCRAQNQYNSTDTLEQHTQLLVRAKAAPFVIQNLTDLEVNISGKILLECRVSGTPEPQVTWRKNGYPISVASGISMENNTLVIERVKKDDEGLYECWASNELGQDSTSAFIKIQGSEEKSNIEVIILVCTGLAATLFWLLLTLFIRKLRKPDATDIKTGYLSIIMDPEEMPLDEQCDRLPYDSSKWEFPRDRLRLGKTLGHGAFGKVVEASAFGIDKSSTCKTVAVKMLKAECATTNECKALMSELKILIHIGHHLNVVNLLGACTKAGGPLMVIVEYCKYGNLSNYLRGKRGDFIACKSQENSDQAEKSLDESNSDLTELIKRRLESVASTGSSASSGFIEDKSYSDSEDDEEDAEDLYKRPLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPEAIFDKIYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEDFCRRLKEGTRMRSPEYSTPEVYQTMLDCWHGDPTERPTFTELVERLGDLLQASVQQDGKDYIPLNITLNPDGESNPKTCSVEENLNPGVNRWSAVETGNNSKKRPLSVKTFDEVPVEKEKVMHEESDSGMVLTSEEIKSPKRLEIRSWPYGIMALARRAVSRSKESILSDHEAVKYQPAVQVEEDTMDFTLEDSVLLPMDPNLECHSPPPDYNSVIHYSAPPV
SIO_010081: LOC116793766
subclass of: SO_0000673
so part of: LOC116793766
location: join(482059..482122,516908..517004,520801..521012,532813..532940,537235..537394,538786..538922,540396..540555,541341..541458,543191..543366,554918..555065,557030..557132,565562..565670,573340..573633,575594..575740,577806..577931,578036..578142,579342..579477,580724..580828,583060..583176,586478..586566,587805..587970,588520..588617,589508..589630,589736..589847,595246..595345,595932..596037,598028..598152,598402..598480,601031..601125,608946..609150)
location: region:482059-609150:1
so has part: feature:482059-482122:1:exon
so has part: feature:516908-517004:1:exon
so has part: feature:520801-521012:1:exon
so has part: feature:532813-532940:1:exon
so has part: feature:537235-537394:1:exon
so has part: feature:538786-538922:1:exon
so has part: feature:540396-540555:1:exon
so has part: feature:541341-541458:1:exon
so has part: feature:543191-543366:1:exon
so has part: feature:554918-555065:1:exon
so has part: feature:557030-557132:1:exon
so has part: feature:565562-565670:1:exon
so has part: feature:573340-573633:1:exon
so has part: feature:575594-575740:1:exon
so has part: feature:577806-577931:1:exon
so has part: feature:578036-578142:1:exon
so has part: feature:579342-579477:1:exon
so has part: feature:580724-580828:1:exon
so has part: feature:583060-583176:1:exon
so has part: feature:586478-586566:1:exon
so has part: feature:587805-587970:1:exon
so has part: feature:588520-588617:1:exon
so has part: feature:589508-589630:1:exon
so has part: feature:589736-589847:1:exon
so has part: feature:595246-595345:1:exon
so has part: feature:595932-596037:1:exon
so has part: feature:598028-598152:1:exon
so has part: feature:598402-598480:1:exon
so has part: feature:601031-601125:1:exon
so has part: feature:608946-609150:1:exon

XP_032557737.1
type: Protein
SIO_000068: ncbiprotein

position:482059:1
position: 482059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:609150:1
position: 609150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482059-482122:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:516908-517004:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:520801-521012:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:532813-532940:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:537235-537394:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:538786-538922:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:540396-540555:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:541341-541458:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:543191-543366:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:554918-555065:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:557030-557132:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:565562-565670:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:573340-573633:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:575594-575740:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:577806-577931:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:578036-578142:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:579342-579477:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:580724-580828:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:583060-583176:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:586478-586566:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:587805-587970:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:588520-588617:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:589508-589630:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:589736-589847:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:595246-595345:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:595932-596037:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:598028-598152:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:598402-598480:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:601031-601125:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:608946-609150:1:exon

LOC116793955
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793955
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(659349..672305)
location: region:659349-672305:-1
so has part: feature:659349-672305:-1:exon
subclass of: SO_0000011

116793955
type: Gene
SIO_000068: ncbigene

position:659349:-1
position: 659349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:672305:-1
position: 672305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:659349-672305:-1:exon

LOC116793955
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116793955
product: uncharacterized LOC116793955
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004359653.1
SIO_010081: LOC116793955
subclass of: SO_0000673
so part of: LOC116793955
location: complement(join(659349..662482,664419..664625,665754..665865,667818..668284,672228..672305))
location: region:659349-672305:-1
so has part: feature:672228-672305:-1:exon
so has part: feature:667818-668284:-1:exon
so has part: feature:665754-665865:-1:exon
so has part: feature:664419-664625:-1:exon
so has part: feature:659349-662482:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:672228-672305:-1:exon

position:672228:-1
position: 672228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:667818-668284:-1:exon

position:667818:-1
position: 667818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668284:-1
position: 668284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:665754-665865:-1:exon

position:665754:-1
position: 665754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665865:-1
position: 665865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:664419-664625:-1:exon

position:664419:-1
position: 664419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664625:-1
position: 664625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:659349-662482:-1:exon

position:662482:-1
position: 662482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116793954
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793954
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 661194..674971
location: region:661194-674971:1
so has part: feature:661194-674971:1:exon
subclass of: SO_0000010

116793954
type: Gene
SIO_000068: ncbigene

position:661194:1
position: 661194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:674971:1
position: 674971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:661194-674971:1:exon

LOC116793954
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116793954
product: homeobox protein CDX-4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032702213.1
SIO_010081: LOC116793954
subclass of: SO_0000673
so part of: LOC116793954
location: join(661194..661755,671520..671665,674717..674971)
location: region:661194-674971:1
so has part: feature:661194-661755:1:exon
so has part: feature:671520-671665:1:exon
so has part: feature:674717-674971:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:661194-661755:1:exon

position:661755:1
position: 661755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:671520-671665:1:exon

position:671520:1
position: 671520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671665:1
position: 671665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:674717-674971:1:exon

position:674717:1
position: 674717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116793954
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116793954
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein CDX-4-like
translation: MYVSYLLEQESSMYPGSARCTGSTLPGQGFVSAPPYPEYMGYHPVPALDTHGQPPGPWGSHYGPQREDWNAYGPGPSGAGTAQLSAPSPAPGSYSPAEYSSLQPGAGGAPPAEPGSAQHCSPSSHRHSSYEWMRKTVQATSTGKTRTREKYRVVYTDHQRLELEKEFHYNRYITIRRKSELAANLRLSERQVKIWFQNRRAKERKLMKKKMTHFEGSSLGSLQSDSGSVSPMPVPDPRTHSEMPSSLFPAPPPPPPLPHGGLQHPGGLQQVVASQ
SIO_010081: LOC116793954
subclass of: SO_0000673
so part of: LOC116793954
location: join(661329..661755,671520..671665,674717..674971)
location: region:661329-674971:1
so has part: feature:661329-661755:1:exon
so has part: feature:671520-671665:1:exon
so has part: feature:674717-674971:1:exon

XP_032558104.1
type: Protein
SIO_000068: ncbiprotein

position:661329:1
position: 661329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:661329-661755:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671520-671665:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:674717-674971:1:exon

CDX4
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: CDX4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 683092..692071
location: region:683092-692071:1
so has part: feature:683092-692071:1:exon
subclass of: SO_0000010

116793676
type: Gene
SIO_000068: ncbigene

position:683092:1
position: 683092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:692071:1
position: 692071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:683092-692071:1:exon

CDX4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: CDX4
product: caudal type homeobox 4
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 6 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032701636.1
SIO_010081: CDX4
subclass of: SO_0000673
so part of: CDX4
location: join(683092..683630,688497..688642,691072..692071)
location: region:683092-692071:1
so has part: feature:683092-683630:1:exon
so has part: feature:688497-688642:1:exon
so has part: feature:691072-692071:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:683092-683630:1:exon

position:683630:1
position: 683630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:688497-688642:1:exon

position:688497:1
position: 688497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:688642:1
position: 688642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:691072-692071:1:exon

position:691072:1
position: 691072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CDX4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: CDX4
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 6 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: homeobox protein CDX-4
translation: MYVSPLLDKDGSMYPGSARAANTLPGQGFVSAPPYPEYMGYHPVPALDTHGQPPGPWGSHYGPQREDWNAYGPGPSGAGTAQLSALSPAPGSYSPAEYSSLQPXGPGGAPPAEPGSAQHCSPSSHRHSSYEWMRKTVQANTTGKTRTKEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAANLGLSERQVKIWFQNRRXKERKLLKKKIAQFDGSGGSAQSDSGXLSPTELSSSLFPPPTAXQWITPSDIHQVMVSE
SIO_010081: CDX4
subclass of: SO_0000673
so part of: CDX4
location: join(683206..683630,688497..688642,691072..691274)
location: region:683206-691274:1
so has part: feature:683206-683630:1:exon
so has part: feature:688497-688642:1:exon
so has part: feature:691072-691274:1:exon

XP_032557527.1
type: Protein
SIO_000068: ncbiprotein

position:683206:1
position: 683206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:691274:1
position: 691274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:683206-683630:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:688497-688642:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:691072-691274:1:exon

LOC116793678
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793678
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(690513..699475)
location: region:690513-699475:-1
so has part: feature:690513-699475:-1:exon
subclass of: SO_0000011

116793678
type: Gene
SIO_000068: ncbigene

position:690513:-1
position: 690513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:699475:-1
position: 699475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:690513-699475:-1:exon

LOC116793678
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116793678
product: uncharacterized LOC116793678, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004359559.1
SIO_010081: LOC116793678
subclass of: SO_0000673
so part of: LOC116793678
location: complement(join(690513..692262,697227..697361,697887..697977,698534..698590,698623..699020))
location: region:690513-699020:-1
so has part: feature:698623-699020:-1:exon
so has part: feature:698534-698590:-1:exon
so has part: feature:697887-697977:-1:exon
so has part: feature:697227-697361:-1:exon
so has part: feature:690513-692262:-1:exon

position:699020:-1
position: 699020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:698623-699020:-1:exon

position:698623:-1
position: 698623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:698534-698590:-1:exon

position:698534:-1
position: 698534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:698590:-1
position: 698590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:697887-697977:-1:exon

position:697887:-1
position: 697887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:697977:-1
position: 697977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:697227-697361:-1:exon

position:697227:-1
position: 697227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:697361:-1
position: 697361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:690513-692262:-1:exon

position:692262:-1
position: 692262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116793678
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116793678
product: uncharacterized LOC116793678, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004359558.1
SIO_010081: LOC116793678
subclass of: SO_0000673
so part of: LOC116793678
location: complement(join(696379..697361,697887..697977,698534..698590,698623..698715,699043..699475))
location: region:696379-699475:-1
so has part: feature:699043-699475:-1:exon
so has part: feature:698623-698715:-1:exon
so has part: feature:698534-698590:-1:exon
so has part: feature:697887-697977:-1:exon
so has part: feature:696379-697361:-1:exon

position:696379:-1
position: 696379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:699043-699475:-1:exon

position:699043:-1
position: 699043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:698623-698715:-1:exon

position:698715:-1
position: 698715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:698534-698590:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:697887-697977:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:696379-697361:-1:exon

LOC116793678
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116793678
product: uncharacterized LOC116793678, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004359557.1
SIO_010081: LOC116793678
subclass of: SO_0000673
so part of: LOC116793678
location: complement(join(696379..697361,697887..697977,698534..698590,698623..699020))
location: region:696379-699020:-1
so has part: feature:698623-699020:-1:exon
so has part: feature:698534-698590:-1:exon
so has part: feature:697887-697977:-1:exon
so has part: feature:696379-697361:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:698623-699020:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:698534-698590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:697887-697977:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:696379-697361:-1:exon

CHIC1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: CHIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 699492..721927
location: region:699492-721927:1
so has part: feature:699492-721927:1:exon
subclass of: SO_0000010

116793677
type: Gene
SIO_000068: ncbigene

position:699492:1
position: 699492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:721927:1
position: 721927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:699492-721927:1:exon

CHIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: CHIC1
product: cysteine rich hydrophobic domain 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 long SRA read, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032701638.1
SIO_010081: CHIC1
subclass of: SO_0000673
so part of: CHIC1
location: join(699492..699714,706079..706133,714118..714273,716944..717000,717240..717299,718135..721927)
location: region:699492-721927:1
so has part: feature:699492-699714:1:exon
so has part: feature:706079-706133:1:exon
so has part: feature:714118-714273:1:exon
so has part: feature:716944-717000:1:exon
so has part: feature:717240-717299:1:exon
so has part: feature:718135-721927:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:699492-699714:1:exon

position:699714:1
position: 699714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:706079-706133:1:exon

position:706079:1
position: 706079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:706133:1
position: 706133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:714118-714273:1:exon

position:714118:1
position: 714118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:714273:1
position: 714273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:716944-717000:1:exon

position:716944:1
position: 716944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:717000:1
position: 717000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:717240-717299:1:exon

position:717240:1
position: 717240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:717299:1
position: 717299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:718135-721927:1:exon

position:718135:1
position: 718135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHIC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: CHIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine-rich hydrophobic domain-containing protein 1 isoform X2
translation: MSVLLPNMADFDTIYELEEEEDEEQDEPEPVVRSQELPRPRDAPDPVAVRGAGHITVFGLSNKFDTEFPSVLTGKVAPEEFKTSISRVNACLRKNLPINVKWLLCGCLCCCCTLGCSLWPVVCLNKRTRRSIQKLLEWENNRLYHKLGLHWKLSKRKCETSNMMEYVILIEFLQNIPYSDLTEEQHWSFMLPVIFYP
SIO_010081: CHIC1
subclass of: SO_0000673
so part of: CHIC1
location: join(699545..699714,706079..706133,714118..714273,716944..717000,717240..717299,718135..718230)
location: region:699545-718230:1
so has part: feature:699545-699714:1:exon
so has part: feature:706079-706133:1:exon
so has part: feature:714118-714273:1:exon
so has part: feature:716944-717000:1:exon
so has part: feature:717240-717299:1:exon
so has part: feature:718135-718230:1:exon

XP_032557529.1
type: Protein
SIO_000068: ncbiprotein

position:699545:1
position: 699545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:718230:1
position: 718230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:699545-699714:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:706079-706133:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:714118-714273:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:716944-717000:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:717240-717299:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:718135-718230:1:exon

CHIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: CHIC1
product: cysteine rich hydrophobic domain 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032701637.1
SIO_010081: CHIC1
subclass of: SO_0000673
so part of: CHIC1
location: join(699855..700580,703911..704004,704302..704387,706129..706133,714118..714273,716944..717000,717240..717299,718135..721927)
location: region:699855-721927:1
so has part: feature:699855-700580:1:exon
so has part: feature:703911-704004:1:exon
so has part: feature:704302-704387:1:exon
so has part: feature:706129-706133:1:exon
so has part: feature:714118-714273:1:exon
so has part: feature:716944-717000:1:exon
so has part: feature:717240-717299:1:exon
so has part: feature:718135-721927:1:exon

position:699855:1
position: 699855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:699855-700580:1:exon

position:700580:1
position: 700580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:703911-704004:1:exon

position:703911:1
position: 703911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:704004:1
position: 704004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:704302-704387:1:exon

position:704302:1
position: 704302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:704387:1
position: 704387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:706129-706133:1:exon

position:706129:1
position: 706129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:714118-714273:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:716944-717000:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:717240-717299:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:718135-721927:1:exon

CHIC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: CHIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine-rich hydrophobic domain-containing protein 1 isoform X1
translation: MGGEGSPISRENCVGCGTVSSSICGCQCERCLSVTEVSWMCYTEGNVLATDKRLLLLAPVRVSVLGEVDLWHGLVELVSYMGKVAPEEFKTSISRVNACLRKNLPINVKWLLCGCLCCCCTLGCSLWPVVCLNKRTRRSIQKLLEWENNRLYHKLGLHWKLSKRKCETSNMMEYVILIEFLQNIPYSDLTEEQHWSFMLPVIFYP
SIO_010081: CHIC1
subclass of: SO_0000673
so part of: CHIC1
location: join(700517..700580,703911..704004,704302..704387,706129..706133,714118..714273,716944..717000,717240..717299,718135..718230)
location: region:700517-718230:1
so has part: feature:700517-700580:1:exon
so has part: feature:703911-704004:1:exon
so has part: feature:704302-704387:1:exon
so has part: feature:706129-706133:1:exon
so has part: feature:714118-714273:1:exon
so has part: feature:716944-717000:1:exon
so has part: feature:717240-717299:1:exon
so has part: feature:718135-718230:1:exon

XP_032557528.1
type: Protein
SIO_000068: ncbiprotein

position:700517:1
position: 700517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:700517-700580:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:703911-704004:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:704302-704387:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:706129-706133:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:714118-714273:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:716944-717000:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:717240-717299:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:718135-718230:1:exon

LOC116793675
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793675
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 724912..746830
location: region:724912-746830:1
so has part: feature:724912-746830:1:exon
subclass of: SO_0000010

116793675
type: Gene
SIO_000068: ncbigene

position:724912:1
position: 724912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746830:1
position: 746830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:724912-746830:1:exon

LOC116793675
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116793675
product: pre-mRNA 3'-end-processing factor FIP1-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 2 long SRA reads, 2 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032701634.1
SIO_010081: LOC116793675
subclass of: SO_0000673
so part of: LOC116793675
location: join(724912..725087,725891..725930,728804..728888,730020..730126,730853..730911,731900..732010,734194..734324,735082..735205,736153..736258,737231..737429,738773..738799,739695..739752,740244..740299,741382..741584,743097..743258,745610..746830)
location: region:724912-746830:1
so has part: feature:724912-725087:1:exon
so has part: feature:725891-725930:1:exon
so has part: feature:728804-728888:1:exon
so has part: feature:730020-730126:1:exon
so has part: feature:730853-730911:1:exon
so has part: feature:731900-732010:1:exon
so has part: feature:734194-734324:1:exon
so has part: feature:735082-735205:1:exon
so has part: feature:736153-736258:1:exon
so has part: feature:737231-737429:1:exon
so has part: feature:738773-738799:1:exon
so has part: feature:739695-739752:1:exon
so has part: feature:740244-740299:1:exon
so has part: feature:741382-741584:1:exon
so has part: feature:743097-743258:1:exon
so has part: feature:745610-746830:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:724912-725087:1:exon

position:725087:1
position: 725087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:725891-725930:1:exon

position:725891:1
position: 725891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725930:1
position: 725930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:728804-728888:1:exon

position:728804:1
position: 728804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:728888:1
position: 728888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:730020-730126:1:exon

position:730020:1
position: 730020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730126:1
position: 730126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:730853-730911:1:exon

position:730853:1
position: 730853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730911:1
position: 730911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:731900-732010:1:exon

position:731900:1
position: 731900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732010:1
position: 732010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:734194-734324:1:exon

position:734194:1
position: 734194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:734324:1
position: 734324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:735082-735205:1:exon

position:735082:1
position: 735082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:735205:1
position: 735205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:736153-736258:1:exon

position:736153:1
position: 736153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:736258:1
position: 736258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:737231-737429:1:exon

position:737231:1
position: 737231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:737429:1
position: 737429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:738773-738799:1:exon

position:738773:1
position: 738773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:738799:1
position: 738799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:739695-739752:1:exon

position:739695:1
position: 739695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739752:1
position: 739752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:740244-740299:1:exon

position:740244:1
position: 740244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:740299:1
position: 740299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:741382-741584:1:exon

position:741382:1
position: 741382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741584:1
position: 741584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:743097-743258:1:exon

position:743097:1
position: 743097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:743258:1
position: 743258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:745610-746830:1:exon

position:745610:1
position: 745610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116793675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116793675
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: pre-mRNA 3'-end-processing factor FIP1-like
translation: MSQHALPSGEDDEDDSDSDSDDDDVKVTIGNIKTGAPSYMGTPMNLNLKTGRGYGASASAKLQPKGIDLDAAGNINGLPVIEVDLDSFEDKPWRKPGADLSDYFNYGFNEETWKAYCEKQRRLQLGLDPAPPISTENKITVQQGRTGNAEKEVENXIIKTEFKTDFLALVGGRMKAGPPPNRKLGGTIDVIGGQAGTIRRVEGRRRDKHASEENPIQVLGDHGSKPQPPQQPQQPSQPQQPPQQQPFAPPAGPPPPPLAGPPPPHFLHPPPPVTSVPPPLHPPGLPPPGPIPGLFPPPLAPPPALLIPTLDGQPASYNNRQPPPFGYNSADSGFISYPPISTSHTPWVTTVDKGTSSSSSXHWEYSGSRRERERERERERERERDRDRDRTPXTSEYNNDDERYRYYSRERSYGLERDYRRSRDRSREREDRHRERRHRDKEESSKHKSSRRKQHESEEGESHRRHKHKKNKRSKEEKEASEDGAQEGEEQDTKE
SIO_010081: LOC116793675
subclass of: SO_0000673
so part of: LOC116793675
location: join(728877..728888,730020..730126,730853..730911,731900..732010,734194..734324,735082..735205,736153..736258,737231..737429,738773..738799,739695..739752,740244..740299,741382..741584,743097..743258,745610..745742)
location: region:728877-745742:1
so has part: feature:728877-728888:1:exon
so has part: feature:730020-730126:1:exon
so has part: feature:730853-730911:1:exon
so has part: feature:731900-732010:1:exon
so has part: feature:734194-734324:1:exon
so has part: feature:735082-735205:1:exon
so has part: feature:736153-736258:1:exon
so has part: feature:737231-737429:1:exon
so has part: feature:738773-738799:1:exon
so has part: feature:739695-739752:1:exon
so has part: feature:740244-740299:1:exon
so has part: feature:741382-741584:1:exon
so has part: feature:743097-743258:1:exon
so has part: feature:745610-745742:1:exon

XP_032557525.1
type: Protein
SIO_000068: ncbiprotein

position:728877:1
position: 728877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:745742:1
position: 745742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:728877-728888:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:730020-730126:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:730853-730911:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:731900-732010:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:734194-734324:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:735082-735205:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:736153-736258:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:737231-737429:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:738773-738799:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:739695-739752:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:740244-740299:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:741382-741584:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:743097-743258:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:745610-745742:1:exon

LOC116793750
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793750
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(748229..778161)
location: region:748229-778161:-1
so has part: feature:748229-778161:-1:exon
subclass of: SO_0000010

116793750
type: Gene
SIO_000068: ncbigene

position:748229:-1
position: 748229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778161:-1
position: 778161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:748229-778161:-1:exon

LOC116793750
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116793750
product: ligand of Numb protein X 2-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032701819.1
SIO_010081: LOC116793750
subclass of: SO_0000673
so part of: LOC116793750
location: complement(join(748229..750310,751363..751521,755529..755739,755910..756084,757126..757311,759283..759648,761002..761198,762581..762807,765258..765712,777942..778161))
location: region:748229-778161:-1
so has part: feature:777942-778161:-1:exon
so has part: feature:765258-765712:-1:exon
so has part: feature:762581-762807:-1:exon
so has part: feature:761002-761198:-1:exon
so has part: feature:759283-759648:-1:exon
so has part: feature:757126-757311:-1:exon
so has part: feature:755910-756084:-1:exon
so has part: feature:755529-755739:-1:exon
so has part: feature:751363-751521:-1:exon
so has part: feature:748229-750310:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:777942-778161:-1:exon

position:777942:-1
position: 777942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:765258-765712:-1:exon

position:765258:-1
position: 765258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:765712:-1
position: 765712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:762581-762807:-1:exon

position:762581:-1
position: 762581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:762807:-1
position: 762807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:761002-761198:-1:exon

position:761002:-1
position: 761002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761198:-1
position: 761198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:759283-759648:-1:exon

position:759283:-1
position: 759283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759648:-1
position: 759648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:757126-757311:-1:exon

position:757126:-1
position: 757126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:757311:-1
position: 757311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:755910-756084:-1:exon

position:755910:-1
position: 755910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:756084:-1
position: 756084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:755529-755739:-1:exon

position:755529:-1
position: 755529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:755739:-1
position: 755739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:751363-751521:-1:exon

position:751363:-1
position: 751363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:751521:-1
position: 751521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:748229-750310:-1:exon

position:750310:-1
position: 750310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116793750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116793750
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: ligand of Numb protein X 2-like
translation: MLAVMADPALEEHVSQVPELCSECGQSHLVLDNHLYNFQDEVDDELICHICLQPLLQPMDTPCGHTYCFRCLENFMQEYSFCPMDRKKLSFQQCHKSSLLVRNLLDKLIVLCPFKAECQQTMQRCELEAHLHNRCPGFKKYKSELQRKKNPISKGKEDPPTKRETNTPKDAEVPGGGSSLVAESSGAAVVSLGTAEPGLVNPAFEETEEDLPHRTSLVAETTTIEIHREDLEEELGIRIVGGKDTPLGNIVVQEVLRDSVIAADGRIAPGDHILEVNGVNISSVTHCQAVSFLRHPGPVLHLMVLQEKGFSNKTAQQDSSSANREVIHVTLIKRDRSEPLGIKLIRKTDEAGIFILDLLEGGLAAKNGRLSRNDRVLSINGQDLRQGTPEAAAQIIQTTESRVNFVILRQPGVQLPEPAEDGSSSNSSSSSSSSSGGSPIHHRRRPDQNHYRRKSTYQKDLPQGYATHEKTVAIKKEPKESLGITIGGGRDNKNKLPIYVTSVQPIGCLFRDGRIKRGDVLLSINGIDLTHLNYYEAVAALKSNAASHSVTLKALEILSLNSPEAPLDIREQGFSWSPLWITWLGLPSYLHFCQDIVLSKGNLESWGFSIVGGFEESKGNQPFFIKTIVPGTPAFRDRKLKCGDEIVAVNGVPAIGMSNAELIPMLKEQRXKVTLTVVSWPGSLV
SIO_010081: LOC116793750
subclass of: SO_0000673
so part of: LOC116793750
location: complement(join(750176..750310,751363..751521,755529..755739,755910..756084,757126..757311,759283..759648,761002..761198,762581..762807,765258..765658))
location: region:750176-765658:-1
so has part: feature:765258-765658:-1:exon
so has part: feature:762581-762807:-1:exon
so has part: feature:761002-761198:-1:exon
so has part: feature:759283-759648:-1:exon
so has part: feature:757126-757311:-1:exon
so has part: feature:755910-756084:-1:exon
so has part: feature:755529-755739:-1:exon
so has part: feature:751363-751521:-1:exon
so has part: feature:750176-750310:-1:exon

XP_032557710.1
type: Protein
SIO_000068: ncbiprotein

position:750176:-1
position: 750176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:765658:-1
position: 765658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:765258-765658:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:762581-762807:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:761002-761198:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:759283-759648:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:757126-757311:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:755910-756084:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:755529-755739:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:751363-751521:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:750176-750310:-1:exon

LOC116793752
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 777987..803949
location: region:777987-803949:1
so has part: feature:777987-803949:1:exon
subclass of: SO_0000011

116793752
type: Gene
SIO_000068: ncbigene

position:777987:1
position: 777987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:803949:1
position: 803949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:777987-803949:1:exon

LOC116793752
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116793752
product: uncharacterized LOC116793752, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004359583.1
SIO_010081: LOC116793752
subclass of: SO_0000673
so part of: LOC116793752
location: join(777987..778124,779370..779471,779566..779604,780142..780232,783108..783176,795298..795435,798464..798645,803806..803949)
location: region:777987-803949:1
so has part: feature:777987-778124:1:exon
so has part: feature:779370-779471:1:exon
so has part: feature:779566-779604:1:exon
so has part: feature:780142-780232:1:exon
so has part: feature:783108-783176:1:exon
so has part: feature:795298-795435:1:exon
so has part: feature:798464-798645:1:exon
so has part: feature:803806-803949:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:777987-778124:1:exon

position:778124:1
position: 778124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:779370-779471:1:exon

position:779370:1
position: 779370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:779471:1
position: 779471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:779566-779604:1:exon

position:779566:1
position: 779566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:779604:1
position: 779604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:780142-780232:1:exon

position:780142:1
position: 780142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:780232:1
position: 780232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:783108-783176:1:exon

position:783108:1
position: 783108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783176:1
position: 783176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:795298-795435:1:exon

position:795298:1
position: 795298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:795435:1
position: 795435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:798464-798645:1:exon

position:798464:1
position: 798464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:798645:1
position: 798645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:803806-803949:1:exon

position:803806:1
position: 803806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116793752
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116793752
product: uncharacterized LOC116793752, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004359584.1
SIO_010081: LOC116793752
subclass of: SO_0000673
so part of: LOC116793752
location: join(778306..778575,779370..779471,779566..779604,780142..780232,783108..783176,795298..795435,798464..798645,803806..803949)
location: region:778306-803949:1
so has part: feature:778306-778575:1:exon
so has part: feature:779370-779471:1:exon
so has part: feature:779566-779604:1:exon
so has part: feature:780142-780232:1:exon
so has part: feature:783108-783176:1:exon
so has part: feature:795298-795435:1:exon
so has part: feature:798464-798645:1:exon
so has part: feature:803806-803949:1:exon

position:778306:1
position: 778306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:778306-778575:1:exon

position:778575:1
position: 778575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:779370-779471:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:779566-779604:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:780142-780232:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:783108-783176:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:795298-795435:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:798464-798645:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:803806-803949:1:exon

LOC116793751
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793751
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(814473..824794)
location: region:814473-824794:-1
so has part: feature:814473-824794:-1:exon
subclass of: SO_0000010

116793751
type: Gene
SIO_000068: ncbigene

position:814473:-1
position: 814473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:824794:-1
position: 824794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:814473-824794:-1:exon

LOC116793751
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116793751
product: ras-like protein family member 11A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032701820.1
SIO_010081: LOC116793751
subclass of: SO_0000673
so part of: LOC116793751
location: complement(join(814473..815243,820407..820489,822711..822767,824127..824794))
location: region:814473-824794:-1
so has part: feature:824127-824794:-1:exon
so has part: feature:822711-822767:-1:exon
so has part: feature:820407-820489:-1:exon
so has part: feature:814473-815243:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:824127-824794:-1:exon

position:824127:-1
position: 824127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:822711-822767:-1:exon

position:822711:-1
position: 822711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822767:-1
position: 822767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:820407-820489:-1:exon

position:820407:-1
position: 820407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820489:-1
position: 820489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:814473-815243:-1:exon

position:815243:-1
position: 815243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116793751
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116793751
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-like protein family member 11A-like
translation: MRLIPQDTMSQYSTNFLLLPIPEYPVGDLVPNKIIKLVVLGGSSVGKTALVVRFLTKRFIGDYEANTGALYSRKFTIDGEQISLQVQDTPFVSLEDDTDSICCQEQINRSIYWADGFVFVYSITDYESYRVLRPLHQHIRRIHPNANIPLLLVANKGDLLRARQVSSKEGLQLARELGGTYHEVSARENCEGVHEAFQQLCQELSRIIGSCNGEKRRGLHLVRPKSPNMQDLKRRLKQALTSKGKSATAL
SIO_010081: LOC116793751
subclass of: SO_0000673
so part of: LOC116793751
location: complement(join(814776..815243,820407..820489,822711..822767,824127..824271))
location: region:814776-824271:-1
so has part: feature:824127-824271:-1:exon
so has part: feature:822711-822767:-1:exon
so has part: feature:820407-820489:-1:exon
so has part: feature:814776-815243:-1:exon

XP_032557711.1
type: Protein
SIO_000068: ncbiprotein

position:814776:-1
position: 814776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:824271:-1
position: 824271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:824127-824271:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:822711-822767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:820407-820489:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:814776-815243:-1:exon

LOC116793875
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793875
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 830544..858159
location: region:830544-858159:1
so has part: feature:830544-858159:1:exon
subclass of: SO_0000010

116793875
type: Gene
SIO_000068: ncbigene

position:830544:1
position: 830544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:858159:1
position: 858159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:830544-858159:1:exon

LOC116793875
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116793875
product: ubiquitin carboxyl-terminal hydrolase 12-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; deleted 4 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032702062.1
SIO_010081: LOC116793875
subclass of: SO_0000673
so part of: LOC116793875
location: join(830544..830651,841482..841562,845866..846078,846957..847186,848364..848440,849220..849303,849948..850145,852052..852130,855866..858159)
location: region:830544-858159:1
so has part: feature:830544-830651:1:exon
so has part: feature:841482-841562:1:exon
so has part: feature:845866-846078:1:exon
so has part: feature:846957-847186:1:exon
so has part: feature:848364-848440:1:exon
so has part: feature:849220-849303:1:exon
so has part: feature:849948-850145:1:exon
so has part: feature:852052-852130:1:exon
so has part: feature:855866-858159:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:830544-830651:1:exon

position:830651:1
position: 830651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:841482-841562:1:exon

position:841482:1
position: 841482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:841562:1
position: 841562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:845866-846078:1:exon

position:845866:1
position: 845866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:846078:1
position: 846078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:846957-847186:1:exon

position:846957:1
position: 846957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:847186:1
position: 847186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:848364-848440:1:exon

position:848364:1
position: 848364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:848440:1
position: 848440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:849220-849303:1:exon

position:849220:1
position: 849220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:849303:1
position: 849303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:849948-850145:1:exon

position:849948:1
position: 849948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:850145:1
position: 850145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:852052-852130:1:exon

position:852052:1
position: 852052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:852130:1
position: 852130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:855866-858159:1:exon

position:855866:1
position: 855866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116793875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116793875
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; deleted 4 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 12-like
translation: MEALVTVRRLAAVCTMGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKXLAYKVQPRKKESLLTCLSDLFNSIATQKKKVGVIPPKXFISRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEEKKQEKQNGKLQNGSIESEEGDKADLTWVHEIFQGTLTNETRCLNCEAVSSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEAQKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQXIEEFYGLTSDISKNSESGYILFYQSRD
SIO_010081: LOC116793875
subclass of: SO_0000673
so part of: LOC116793875
location: join(830604..830651,841482..841562,845866..846078,846957..847186,848364..848440,849220..849303,849948..850145,852052..852130,855866..855966)
location: region:830604-855966:1
so has part: feature:830604-830651:1:exon
so has part: feature:841482-841562:1:exon
so has part: feature:845866-846078:1:exon
so has part: feature:846957-847186:1:exon
so has part: feature:848364-848440:1:exon
so has part: feature:849220-849303:1:exon
so has part: feature:849948-850145:1:exon
so has part: feature:852052-852130:1:exon
so has part: feature:855866-855966:1:exon

XP_032557953.1
type: Protein
SIO_000068: ncbiprotein

position:830604:1
position: 830604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:855966:1
position: 855966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:830604-830651:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:841482-841562:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:845866-846078:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846957-847186:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:848364-848440:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:849220-849303:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:849948-850145:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:852052-852130:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:855866-855966:1:exon

LOC116794045
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794045
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 873920..876465
location: region:873920-876465:1
so has part: feature:873920-876465:1:exon
subclass of: SO_0000010

116794045
type: Gene
SIO_000068: ncbigene

position:873920:1
position: 873920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:876465:1
position: 876465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:873920-876465:1:exon

LOC116794045
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794045
product: G-protein coupled receptor 12-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032702362.1
SIO_010081: LOC116794045
subclass of: SO_0000673
so part of: LOC116794045
location: join(873920..874175,875156..876465)
location: region:873920-876465:1
so has part: feature:873920-874175:1:exon
so has part: feature:875156-876465:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:873920-874175:1:exon

position:874175:1
position: 874175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:875156-876465:1:exon

position:875156:1
position: 875156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116794045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794045
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: G-protein coupled receptor 12-like
translation: MLHGPAAMGEPWPPQPQQQRLPGPGNASEPPVWPSAAGGPGTAAPGGGGAAGSVSPWDIALCATGTAVAGENALVLAVLFYTPSLRAPMFLLIGSLALADLLAGLGLVANFAVRYLLRPPSEAAELAAAGLLLAAFSASVCSLLAITVDRYLSLYNALTYHSERTLGFTCAMVLLMWLLCLGVGLLPLLGWNCLRDQSACSILRPVTKDNAAVLAVTFLLLFALMMQLYLQICKIAFRHAQHRRAAPVIATAQATSTRKGLSTLSTLSLILGTFALCWIPFLAIYSLVADSSYPAVYTYSLALPATCNSLINPIIYAFRNPDIQKSLWLACCGCIPSTFSSRPRTSSDV
SIO_010081: LOC116794045
subclass of: SO_0000673
so part of: LOC116794045
location: 875158..876209
location: region:875158-876209:1
so has part: feature:875158-876209:1:exon

XP_032558253.1
type: Protein
SIO_000068: ncbiprotein

position:875158:1
position: 875158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:876209:1
position: 876209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:875158-876209:1:exon

LOC116794020
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794020
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(882597..916629)
location: region:882597-916629:-1
so has part: feature:882597-916629:-1:exon
subclass of: SO_0000010

116794020
type: Gene
SIO_000068: ncbigene

position:882597:-1
position: 882597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:916629:-1
position: 916629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:882597-916629:-1:exon

LOC116794020
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794020
product: wiskott-Aldrich syndrome protein family member 3-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 14 bases in 11 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 long SRA reads, 2 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032702334.1
SIO_010081: LOC116794020
subclass of: SO_0000673
so part of: LOC116794020
location: complement(join(882597..892201,893051..893228,893269..893463,894017..894252,894644..894819,895004..895119,895426..895578,895702..895834,897255..897411,908314..908566,916224..916629))
location: region:882597-916629:-1
so has part: feature:916224-916629:-1:exon
so has part: feature:908314-908566:-1:exon
so has part: feature:897255-897411:-1:exon
so has part: feature:895702-895834:-1:exon
so has part: feature:895426-895578:-1:exon
so has part: feature:895004-895119:-1:exon
so has part: feature:894644-894819:-1:exon
so has part: feature:894017-894252:-1:exon
so has part: feature:893269-893463:-1:exon
so has part: feature:893051-893228:-1:exon
so has part: feature:882597-892201:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:916224-916629:-1:exon

position:916224:-1
position: 916224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:908314-908566:-1:exon

position:908314:-1
position: 908314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:908566:-1
position: 908566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:897255-897411:-1:exon

position:897255:-1
position: 897255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:897411:-1
position: 897411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:895702-895834:-1:exon

position:895702:-1
position: 895702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:895834:-1
position: 895834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:895426-895578:-1:exon

position:895426:-1
position: 895426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:895578:-1
position: 895578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:895004-895119:-1:exon

position:895004:-1
position: 895004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:895119:-1
position: 895119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:894644-894819:-1:exon

position:894644:-1
position: 894644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:894819:-1
position: 894819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:894017-894252:-1:exon

position:894017:-1
position: 894017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:894252:-1
position: 894252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:893269-893463:-1:exon

position:893269:-1
position: 893269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893463:-1
position: 893463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:893051-893228:-1:exon

position:893051:-1
position: 893051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893228:-1
position: 893228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:882597-892201:-1:exon

position:892201:-1
position: 892201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116794020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794020
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 14 bases in 11 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: wiskott-Aldrich syndrome protein family member 3-like
translation: MPAAPPPPPRPPPPAAASLPASPPPPPSSSSSSSIAPLGPRVPTCGGGRPPPCAPPPTPPGSQAAPARPRPRIARRAAAPPPPPHPAAGPARAGPRQRRPPAGPAGAGWQKGWGEPPLPGPAEPPPRAAGASRGRANPPKLRGRVRGGSGAPGRPCGAVRAERGGGGGEGTCAVRALRSGAGSAGSGGAGRGQRERQRRPQPRGPARPRRDGAAPPARRRRGVRALGQDAAGEGNIEPRHLCRGALPDGXTSELECVTNSTLAAIIKQLGSLSRHAEDIFGELFNEANSFYMRMNSLQERVXLLVIKVTQLDSTVEEVSLQDINMRKAFKSSTVQNQQVVSRNSIPNPVMEMYQRCDKXPPLNILTPYRDDXKDGLKFYTDPSYXFNLWKEKMLQATEDKRKEKRRQKEQRLVEDSTREVKKVRKARNRRLEWNMMAYDKEFRPDNRFSPSPYHMASSEGSLSPDNRSYASDAADHSYPDPNQPPAAXLAPVEHKEGVLAXPHPQEHVYRPPGSRQNSLSRLQQPHAPPPPEAVLNGPXPHLVKDYGPQPVPMAEYFVPPXPPPPPPVIPXAQTAFDSPISAPPALAPGSAGPPPAYRPPPPPPPPPPPPPPSGPMGPPVAPPXPPPGPPAVSASPAHSASPPAPTVEPRKPQIPLMPMSDARSDLLAAIRRGIQLRKVQEQWEQEAKKEPVGNDVATILSRRIAVEYSESDDDSELDENEWSD
SIO_010081: LOC116794020
subclass of: SO_0000673
so part of: LOC116794020
location: complement(join(892043..892201,893051..893228,893269..893463,894017..894252,894644..894819,895004..895119,895426..895578,895702..895834,897255..897411,908314..908566,916224..916629))
location: region:892043-916629:-1
so has part: feature:916224-916629:-1:exon
so has part: feature:908314-908566:-1:exon
so has part: feature:897255-897411:-1:exon
so has part: feature:895702-895834:-1:exon
so has part: feature:895426-895578:-1:exon
so has part: feature:895004-895119:-1:exon
so has part: feature:894644-894819:-1:exon
so has part: feature:894017-894252:-1:exon
so has part: feature:893269-893463:-1:exon
so has part: feature:893051-893228:-1:exon
so has part: feature:892043-892201:-1:exon

XP_032558225.1
type: Protein
SIO_000068: ncbiprotein

position:892043:-1
position: 892043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:916224-916629:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:908314-908566:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:897255-897411:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:895702-895834:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:895426-895578:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:895004-895119:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:894644-894819:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:894017-894252:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:893269-893463:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:893051-893228:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:892043-892201:-1:exon

SLC16A2
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: SLC16A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 916628..951664
location: region:916628-951664:1
so has part: feature:916628-951664:1:exon
subclass of: SO_0000010

116793743
type: Gene
SIO_000068: ncbigene

position:916628:1
position: 916628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:951664:1
position: 951664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:916628-951664:1:exon

SLC16A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SLC16A2
product: solute carrier family 16 member 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 1 Protein, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032701804.1
SIO_010081: SLC16A2
subclass of: SO_0000673
so part of: SLC16A2
location: join(916628..916757,916851..917032,944333..944460,947712..947738,948322..948783,949227..949367,949869..950097,951330..951664)
location: region:916628-951664:1
so has part: feature:916628-916757:1:exon
so has part: feature:916851-917032:1:exon
so has part: feature:944333-944460:1:exon
so has part: feature:947712-947738:1:exon
so has part: feature:948322-948783:1:exon
so has part: feature:949227-949367:1:exon
so has part: feature:949869-950097:1:exon
so has part: feature:951330-951664:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:916628-916757:1:exon

position:916757:1
position: 916757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:916851-917032:1:exon

position:916851:1
position: 916851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:917032:1
position: 917032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:944333-944460:1:exon

position:944333:1
position: 944333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:944460:1
position: 944460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:947712-947738:1:exon

position:947712:1
position: 947712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:947738:1
position: 947738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:948322-948783:1:exon

position:948322:1
position: 948322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:948783:1
position: 948783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:949227-949367:1:exon

position:949227:1
position: 949227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949367:1
position: 949367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:949869-950097:1:exon

position:949869:1
position: 949869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:950097:1
position: 950097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:951330-951664:1:exon

position:951330:1
position: 951330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC16A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SLC16A2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: monocarboxylate transporter 8
translation: MWDRLRGSRAAGGGRSGAAMAQRDEKVPAAAGESEPGAGAGGGPSGAAAPFQPREGGFGWVVVFAAXWCNGSIFGINNSFGILYMMLQSDLGEGEKDPALEFKTAWVGSLAMGMIFFCSPIVSIFTDRLGCRTTAAMGAAIAFIGSSSSHFTPSLSVSGSRYFTYGILFGCGSSFAFQPSLVILGHYFKRRLGLANGIVAGGSCLISVPLPFFLKMVGKAIGLAHTFQVLSALMLIQIFLSMTYRPTLPPSCDSQHDGQDKLGSRSARQQCWAQTRRYFNLRVFRRKTYRIWAFGIATAVLGYLVPYMHLVKYVEKRFKETKKDWILLVCLGGMSGWALGSGRIGDCIPGLKKIYLQVASFMLLGILCMMIPQCQGFEGVIVICLFLGLCDGFFTTIMAPIAFELVGPMQASQAIGYLMGLMAVPMTAGTPIAGYLNDYFGNYDAAFYFAGVPPIIGALVLSVVPLVHQRMLKKQRLDSGKDKMLVSEAVVXGELLPGCPASEAHM
SIO_010081: SLC16A2
subclass of: SO_0000673
so part of: SLC16A2
location: join(916628..916757,916851..917032,944333..944460,947712..947738,948322..948783,949227..949367,949869..950097,951330..951549)
location: region:916628-951549:1
so has part: feature:916628-916757:1:exon
so has part: feature:916851-917032:1:exon
so has part: feature:944333-944460:1:exon
so has part: feature:947712-947738:1:exon
so has part: feature:948322-948783:1:exon
so has part: feature:949227-949367:1:exon
so has part: feature:949869-950097:1:exon
so has part: feature:951330-951549:1:exon

XP_032557695.1
type: Protein
SIO_000068: ncbiprotein

position:951549:1
position: 951549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:916628-916757:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:916851-917032:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:944333-944460:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:947712-947738:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:948322-948783:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:949227-949367:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:949869-950097:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:951330-951549:1:exon

RLIM
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: RLIM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(964860..982505)
location: region:964860-982505:-1
so has part: feature:964860-982505:-1:exon
subclass of: SO_0000010

116793776
type: Gene
SIO_000068: ncbigene

position:964860:-1
position: 964860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:982505:-1
position: 982505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:964860-982505:-1:exon

RLIM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: RLIM
product: ring finger protein, LIM domain interacting, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 11 ESTs, 1 long SRA read, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032701870.1
SIO_010081: RLIM
subclass of: SO_0000673
so part of: RLIM
location: complement(join(964860..971040,971956..972039,972828..973016,982489..982505))
location: region:964860-982505:-1
so has part: feature:982489-982505:-1:exon
so has part: feature:972828-973016:-1:exon
so has part: feature:971956-972039:-1:exon
so has part: feature:964860-971040:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:982489-982505:-1:exon

position:982489:-1
position: 982489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:972828-973016:-1:exon

position:972828:-1
position: 972828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973016:-1
position: 973016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:971956-972039:-1:exon

position:971956:-1
position: 971956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972039:-1
position: 972039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:964860-971040:-1:exon

position:971040:-1
position: 971040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RLIM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: RLIM
product: ring finger protein, LIM domain interacting, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 11 ESTs, 1 long SRA read, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032701867.1
SIO_010081: RLIM
subclass of: SO_0000673
so part of: RLIM
location: complement(join(964860..971040,971956..972039,972828..973016,982328..982372))
location: region:964860-982372:-1
so has part: feature:982328-982372:-1:exon
so has part: feature:972828-973016:-1:exon
so has part: feature:971956-972039:-1:exon
so has part: feature:964860-971040:-1:exon

position:982372:-1
position: 982372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:982328-982372:-1:exon

position:982328:-1
position: 982328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:972828-973016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:971956-972039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:964860-971040:-1:exon

RLIM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: RLIM
product: ring finger protein, LIM domain interacting, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 11 ESTs, 1 long SRA read, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032701869.1
SIO_010081: RLIM
subclass of: SO_0000673
so part of: RLIM
location: complement(join(964860..971040,971956..972039,972828..973016,982314..982331))
location: region:964860-982331:-1
so has part: feature:982314-982331:-1:exon
so has part: feature:972828-973016:-1:exon
so has part: feature:971956-972039:-1:exon
so has part: feature:964860-971040:-1:exon

position:982331:-1
position: 982331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:982314-982331:-1:exon

position:982314:-1
position: 982314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:972828-973016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:971956-972039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:964860-971040:-1:exon

RLIM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: RLIM
product: ring finger protein, LIM domain interacting, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 11 ESTs, 1 long SRA read, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032701868.1
SIO_010081: RLIM
subclass of: SO_0000673
so part of: RLIM
location: complement(join(964860..971040,971956..972039,972828..973018,982302..982316))
location: region:964860-982316:-1
so has part: feature:982302-982316:-1:exon
so has part: feature:972828-973018:-1:exon
so has part: feature:971956-972039:-1:exon
so has part: feature:964860-971040:-1:exon

position:982316:-1
position: 982316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:982302-982316:-1:exon

position:982302:-1
position: 982302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:972828-973018:-1:exon

position:973018:-1
position: 973018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:971956-972039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:964860-971040:-1:exon

RLIM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: RLIM
product: ring finger protein, LIM domain interacting, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032701871.1
SIO_010081: RLIM
subclass of: SO_0000673
so part of: RLIM
location: complement(join(964860..971040,972828..973016,978701..978882))
location: region:964860-978882:-1
so has part: feature:978701-978882:-1:exon
so has part: feature:972828-973016:-1:exon
so has part: feature:964860-971040:-1:exon

position:978882:-1
position: 978882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:978701-978882:-1:exon

position:978701:-1
position: 978701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:972828-973016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:964860-971040:-1:exon

RLIM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: RLIM
product: ring finger protein, LIM domain interacting, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 11 ESTs, 1 long SRA read, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032701866.1
SIO_010081: RLIM
subclass of: SO_0000673
so part of: RLIM
location: complement(join(964860..971040,971956..972039,972828..973016,978701..978875))
location: region:964860-978875:-1
so has part: feature:978701-978875:-1:exon
so has part: feature:972828-973016:-1:exon
so has part: feature:971956-972039:-1:exon
so has part: feature:964860-971040:-1:exon

position:978875:-1
position: 978875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:978701-978875:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:972828-973016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:971956-972039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:964860-971040:-1:exon

RLIM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: RLIM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RLIM isoform X3
translation: MIVFESKRTQGVLEFKICGTLPLVKMESSDSSDKGNIDQSEAQRQSQLDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGAESAEDVSNGDSIIDWLNSVRQTGNTTRSGQRGNQSWRAVSRTNPNSGDFRFSLEINVNRNNGNTNPETENEPSIEPSSGEDLENSQSDSEIPRSESPSVRQPGSERSTSEEVTAEEASPPRGQRRARSRSPEQRRTRARTDRSRSPINPVSEAPRRPHHNPSSQMLDHSSAHEAEGSSRTRQHVTLRQHTVGTEVPSENTVLFSPPETRPAPQGAGSSETNGTSESAAAGQRPPTIVLDLQVRRVRPGEYRQRDSIANRTRSRSQTPNNTVTYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELSYFMYSDSDADPSAPAPSPNMEPSEPQNGAGGTSGNENADVSSGEVYEGGHEASSTSGARREGRNTRGSVTFEESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLAMRNFGESDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRESVV
SIO_010081: RLIM
subclass of: SO_0000673
so part of: RLIM
location: complement(join(969506..971040,972828..973016,978701..978755))
location: region:969506-978755:-1
so has part: feature:978701-978755:-1:exon
so has part: feature:972828-973016:-1:exon
so has part: feature:969506-971040:-1:exon

XP_032557762.1
type: Protein
SIO_000068: ncbiprotein

position:969506:-1
position: 969506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:978755:-1
position: 978755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:978701-978755:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:972828-973016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:969506-971040:-1:exon

RLIM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: RLIM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RLIM isoform X1
translation: MIVFESKRTQGVLEFKICGTLPLVKMESSDSSDKGNIDQSEAQRQSQLDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEITEEELLRRLHQVKEGPPQQNSDENRGAESAEDVSNGDSIIDWLNSVRQTGNTTRSGQRGNQSWRAVSRTNPNSGDFRFSLEINVNRNNGNTNPETENEPSIEPSSGEDLENSQSDSEIPRSESPSVRQPGSERSTSEEVTAEEASPPRGQRRARSRSPEQRRTRARTDRSRSPINPVSEAPRRPHHNPSSQMLDHSSAHEAEGSSRTRQHVTLRQHTVGTEVPSENTVLFSPPETRPAPQGAGSSETNGTSESAAAGQRPPTIVLDLQVRRVRPGEYRQRDSIANRTRSRSQTPNNTVTYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELSYFMYSDSDADPSAPAPSPNMEPSEPQNGAGGTSGNENADVSSGEVYEGGHEASSTSGARREGRNTRGSVTFEESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLAMRNFGESDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRESVV
SIO_010081: RLIM
subclass of: SO_0000673
so part of: RLIM
location: complement(join(969506..971040,971956..972039,972828..973016,978701..978755))
location: region:969506-978755:-1
so has part: feature:978701-978755:-1:exon
so has part: feature:972828-973016:-1:exon
so has part: feature:971956-972039:-1:exon
so has part: feature:969506-971040:-1:exon

XP_032557757.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:978701-978755:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:972828-973016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:971956-972039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:969506-971040:-1:exon

RLIM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: RLIM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RLIM isoform X2
translation: MESSDSSDKGNIDQSEAQRQSQLDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEITEEELLRRLHQVKEGPPQQNSDENRGAESAEDVSNGDSIIDWLNSVRQTGNTTRSGQRGNQSWRAVSRTNPNSGDFRFSLEINVNRNNGNTNPETENEPSIEPSSGEDLENSQSDSEIPRSESPSVRQPGSERSTSEEVTAEEASPPRGQRRARSRSPEQRRTRARTDRSRSPINPVSEAPRRPHHNPSSQMLDHSSAHEAEGSSRTRQHVTLRQHTVGTEVPSENTVLFSPPETRPAPQGAGSSETNGTSESAAAGQRPPTIVLDLQVRRVRPGEYRQRDSIANRTRSRSQTPNNTVTYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELSYFMYSDSDADPSAPAPSPNMEPSEPQNGAGGTSGNENADVSSGEVYEGGHEASSTSGARREGRNTRGSVTFEESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLAMRNFGESDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRESVV
SIO_010081: RLIM
subclass of: SO_0000673
so part of: RLIM
location: complement(join(969506..971040,971956..972039,972828..972996))
location: region:969506-972996:-1
so has part: feature:972828-972996:-1:exon
so has part: feature:971956-972039:-1:exon
so has part: feature:969506-971040:-1:exon

XP_032557758.1
type: Protein
SIO_000068: ncbiprotein

position:972996:-1
position: 972996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:972828-972996:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:971956-972039:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:969506-971040:-1:exon

RLIM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: RLIM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RLIM isoform X2
translation: MESSDSSDKGNIDQSEAQRQSQLDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEITEEELLRRLHQVKEGPPQQNSDENRGAESAEDVSNGDSIIDWLNSVRQTGNTTRSGQRGNQSWRAVSRTNPNSGDFRFSLEINVNRNNGNTNPETENEPSIEPSSGEDLENSQSDSEIPRSESPSVRQPGSERSTSEEVTAEEASPPRGQRRARSRSPEQRRTRARTDRSRSPINPVSEAPRRPHHNPSSQMLDHSSAHEAEGSSRTRQHVTLRQHTVGTEVPSENTVLFSPPETRPAPQGAGSSETNGTSESAAAGQRPPTIVLDLQVRRVRPGEYRQRDSIANRTRSRSQTPNNTVTYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELSYFMYSDSDADPSAPAPSPNMEPSEPQNGAGGTSGNENADVSSGEVYEGGHEASSTSGARREGRNTRGSVTFEESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLAMRNFGESDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRESVV
SIO_010081: RLIM
subclass of: SO_0000673
so part of: RLIM
location: complement(join(969506..971040,971956..972039,972828..972996))
location: region:969506-972996:-1
so has part: feature:972828-972996:-1:exon
so has part: feature:971956-972039:-1:exon
so has part: feature:969506-971040:-1:exon

XP_032557759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:972828-972996:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:971956-972039:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:969506-971040:-1:exon

RLIM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: RLIM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RLIM isoform X2
translation: MESSDSSDKGNIDQSEAQRQSQLDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEITEEELLRRLHQVKEGPPQQNSDENRGAESAEDVSNGDSIIDWLNSVRQTGNTTRSGQRGNQSWRAVSRTNPNSGDFRFSLEINVNRNNGNTNPETENEPSIEPSSGEDLENSQSDSEIPRSESPSVRQPGSERSTSEEVTAEEASPPRGQRRARSRSPEQRRTRARTDRSRSPINPVSEAPRRPHHNPSSQMLDHSSAHEAEGSSRTRQHVTLRQHTVGTEVPSENTVLFSPPETRPAPQGAGSSETNGTSESAAAGQRPPTIVLDLQVRRVRPGEYRQRDSIANRTRSRSQTPNNTVTYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELSYFMYSDSDADPSAPAPSPNMEPSEPQNGAGGTSGNENADVSSGEVYEGGHEASSTSGARREGRNTRGSVTFEESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLAMRNFGESDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRESVV
SIO_010081: RLIM
subclass of: SO_0000673
so part of: RLIM
location: complement(join(969506..971040,971956..972039,972828..972996))
location: region:969506-972996:-1
so has part: feature:972828-972996:-1:exon
so has part: feature:971956-972039:-1:exon
so has part: feature:969506-971040:-1:exon

XP_032557760.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:972828-972996:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:971956-972039:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:969506-971040:-1:exon

RLIM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: RLIM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RLIM isoform X2
translation: MESSDSSDKGNIDQSEAQRQSQLDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEITEEELLRRLHQVKEGPPQQNSDENRGAESAEDVSNGDSIIDWLNSVRQTGNTTRSGQRGNQSWRAVSRTNPNSGDFRFSLEINVNRNNGNTNPETENEPSIEPSSGEDLENSQSDSEIPRSESPSVRQPGSERSTSEEVTAEEASPPRGQRRARSRSPEQRRTRARTDRSRSPINPVSEAPRRPHHNPSSQMLDHSSAHEAEGSSRTRQHVTLRQHTVGTEVPSENTVLFSPPETRPAPQGAGSSETNGTSESAAAGQRPPTIVLDLQVRRVRPGEYRQRDSIANRTRSRSQTPNNTVTYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELSYFMYSDSDADPSAPAPSPNMEPSEPQNGAGGTSGNENADVSSGEVYEGGHEASSTSGARREGRNTRGSVTFEESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLAMRNFGESDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRESVV
SIO_010081: RLIM
subclass of: SO_0000673
so part of: RLIM
location: complement(join(969506..971040,971956..972039,972828..972996))
location: region:969506-972996:-1
so has part: feature:972828-972996:-1:exon
so has part: feature:971956-972039:-1:exon
so has part: feature:969506-971040:-1:exon

XP_032557761.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:972828-972996:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:971956-972039:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:969506-971040:-1:exon

NEXMIF
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: NEXMIF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1003352..1177056)
location: region:1003352-1177056:-1
so has part: feature:1003352-1177056:-1:exon
subclass of: SO_0000010

116793873
type: Gene
SIO_000068: ncbigene

position:1003352:-1
position: 1003352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1177056:-1
position: 1177056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1003352-1177056:-1:exon

NEXMIF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: NEXMIF
product: neurite extension and migration factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 2 long SRA reads, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032702059.1
SIO_010081: NEXMIF
subclass of: SO_0000673
so part of: NEXMIF
location: complement(join(1003352..1015560,1019220..1019344,1061771..1061905,1176180..1176280))
location: region:1003352-1176280:-1
so has part: feature:1176180-1176280:-1:exon
so has part: feature:1061771-1061905:-1:exon
so has part: feature:1019220-1019344:-1:exon
so has part: feature:1003352-1015560:-1:exon

position:1176280:-1
position: 1176280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1176180-1176280:-1:exon

position:1176180:-1
position: 1176180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1061771-1061905:-1:exon

position:1061771:-1
position: 1061771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1061905:-1
position: 1061905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1019220-1019344:-1:exon

position:1019220:-1
position: 1019220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019344:-1
position: 1019344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1003352-1015560:-1:exon

position:1015560:-1
position: 1015560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NEXMIF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: NEXMIF
product: neurite extension and migration factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032702060.1
SIO_010081: NEXMIF
subclass of: SO_0000673
so part of: NEXMIF
location: complement(join(1010912..1015560,1019220..1019344,1061771..1061905,1176980..1177056))
location: region:1010912-1177056:-1
so has part: feature:1176980-1177056:-1:exon
so has part: feature:1061771-1061905:-1:exon
so has part: feature:1019220-1019344:-1:exon
so has part: feature:1010912-1015560:-1:exon

position:1010912:-1
position: 1010912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1176980-1177056:-1:exon

position:1176980:-1
position: 1176980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1061771-1061905:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1019220-1019344:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1010912-1015560:-1:exon

NEXMIF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: NEXMIF
product: neurite extension and migration factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032702061.1
SIO_010081: NEXMIF
subclass of: SO_0000673
so part of: NEXMIF
location: complement(join(1010912..1015560,1019220..1019344,1061771..1061905,1175408..1175631))
location: region:1010912-1175631:-1
so has part: feature:1175408-1175631:-1:exon
so has part: feature:1061771-1061905:-1:exon
so has part: feature:1019220-1019344:-1:exon
so has part: feature:1010912-1015560:-1:exon

position:1175631:-1
position: 1175631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1175408-1175631:-1:exon

position:1175408:-1
position: 1175408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1061771-1061905:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1019220-1019344:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1010912-1015560:-1:exon

NEXMIF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: NEXMIF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurite extension and migration factor
translation: MDDQQEQDCASEDQETILINGVKENESHALGGNERPCSEATVPFPALTAAPRENHACHRAPPAKKPCLLSPPSPLRLTDVPEHTSDDSSAHAISLTSCVTKGMSSWSLPGDCEKAPFTMMEPGGMSALTGDCLMQPSRTCLGCFIESKDGIDAEPGISLKVGDINRDYDTCSVSDIGIHCMSTGETMRYGDQLLSDQLLSFPMHKSRAADKRDAEKSDSDSEDPTQKNYYEGLLLDKCNGEEPLLTNPNQEWGYFESFISESKIELLDLCSKNELSVNLFSEEDVDNYMFDDDDSTLGSDVCSLKIRYESFQDNVREKTTTLQEDAQFNFFPSVFSNCTKRDSRSTLKRGPSGATDPSQFKSEEGIIWGEEEEDGEEEDGEEEEKAALNKSCNSTEMVQYVGSKRSHFLDSVNSTEDSGEFSDDSTCTESSYDVLRDIKDCSRYLARDHSGSFIQQNYGLRAKRKVRYSDDYLYDVDSIENEKILDKKEWLPDGPKEEDDDEWCPKKRRKVSRKEPPVIIKYIIINRFKGEKHMLVKLSKVDANETTVTLNEELLSKYKKLAPLKGFWQERQQSRLDLLRSSLYHKQNFYLNGSDASFLPHPRKRKCKLANRHRIQRIKAIEQSVNKLGSCSSDHKQPCSSKEDVGLKGLPALAIATPSCANGLHVHDITGIATVKCKSQEREHKGTERKVLRRIKFKSEARLKCKKIKAATSTVEDSPALENQDPAARLKDENSPCASDSSHLPECHEDKVAKNSPFLPSTSSSDKPLPSANITTNVPLIPGGYLQTLLDASDLSSNTGIPYFAQHPSEQPQHPLPSIVRPEKPFPALQPAQSCVLSPPSESELQQSPGHLEMEQSSFGSLWPAKAGSDRQDFPGDLPEAAGLPGEFGSGGTPGTDGLPASGYTQVNLNSGKLLYQKNYMPDSQQVQSDDSYQSCHFNNGEGRFHFQRGTLSTDDGRLISFDSVGSLSVSSSNYSSLSLKSCEKDGEDDINDDFLAHCSPKLVIQQSIDEITPLKESTDLLDISNFTPDRFRQSSLSEMSPPDTPNLSPQIAGSDAKPLGTLKGFQESPQPALNSSEKVKWNCGVLQTEDQADNGFALNNHQFQFHMFNDEDSVSLLEKSPCLSTFNEPSGQISTNSKVSKSKRKSSSSKNVGTNQSSSQKATRKKSPKTNKGTDKPQGKNSRQAPKSTRKGKNAVGVNGEKVPAVGGRAVPQLSTVALATKGLAEGTQHCGPAGVKLGKHNGLSGEWPLGKEGGTGWSEPSLGNATSLLDDDQREFEEPSNILSNIASGMADVQRFMMASIEPLWGPVSHNSVPDIFRSPESNSLKLKTLKILAGTSQESKKKANGGSPGAAKNHKSNNKGSSKNSKAATCDSSRPNCSTGFTTDIHAPFFDKNYSNLSTLGNNGPTHKKLYRHKSSSKSLRDENCKIKRMDREQPHKDPPVTAAFEKLR
SIO_010081: NEXMIF
subclass of: SO_0000673
so part of: NEXMIF
location: complement(join(1011278..1015560,1019220..1019295))
location: region:1011278-1019295:-1
so has part: feature:1019220-1019295:-1:exon
so has part: feature:1011278-1015560:-1:exon

XP_032557950.1
type: Protein
SIO_000068: ncbiprotein

position:1011278:-1
position: 1011278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019295:-1
position: 1019295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1019220-1019295:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1011278-1015560:-1:exon

NEXMIF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: NEXMIF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurite extension and migration factor
translation: MDDQQEQDCASEDQETILINGVKENESHALGGNERPCSEATVPFPALTAAPRENHACHRAPPAKKPCLLSPPSPLRLTDVPEHTSDDSSAHAISLTSCVTKGMSSWSLPGDCEKAPFTMMEPGGMSALTGDCLMQPSRTCLGCFIESKDGIDAEPGISLKVGDINRDYDTCSVSDIGIHCMSTGETMRYGDQLLSDQLLSFPMHKSRAADKRDAEKSDSDSEDPTQKNYYEGLLLDKCNGEEPLLTNPNQEWGYFESFISESKIELLDLCSKNELSVNLFSEEDVDNYMFDDDDSTLGSDVCSLKIRYESFQDNVREKTTTLQEDAQFNFFPSVFSNCTKRDSRSTLKRGPSGATDPSQFKSEEGIIWGEEEEDGEEEDGEEEEKAALNKSCNSTEMVQYVGSKRSHFLDSVNSTEDSGEFSDDSTCTESSYDVLRDIKDCSRYLARDHSGSFIQQNYGLRAKRKVRYSDDYLYDVDSIENEKILDKKEWLPDGPKEEDDDEWCPKKRRKVSRKEPPVIIKYIIINRFKGEKHMLVKLSKVDANETTVTLNEELLSKYKKLAPLKGFWQERQQSRLDLLRSSLYHKQNFYLNGSDASFLPHPRKRKCKLANRHRIQRIKAIEQSVNKLGSCSSDHKQPCSSKEDVGLKGLPALAIATPSCANGLHVHDITGIATVKCKSQEREHKGTERKVLRRIKFKSEARLKCKKIKAATSTVEDSPALENQDPAARLKDENSPCASDSSHLPECHEDKVAKNSPFLPSTSSSDKPLPSANITTNVPLIPGGYLQTLLDASDLSSNTGIPYFAQHPSEQPQHPLPSIVRPEKPFPALQPAQSCVLSPPSESELQQSPGHLEMEQSSFGSLWPAKAGSDRQDFPGDLPEAAGLPGEFGSGGTPGTDGLPASGYTQVNLNSGKLLYQKNYMPDSQQVQSDDSYQSCHFNNGEGRFHFQRGTLSTDDGRLISFDSVGSLSVSSSNYSSLSLKSCEKDGEDDINDDFLAHCSPKLVIQQSIDEITPLKESTDLLDISNFTPDRFRQSSLSEMSPPDTPNLSPQIAGSDAKPLGTLKGFQESPQPALNSSEKVKWNCGVLQTEDQADNGFALNNHQFQFHMFNDEDSVSLLEKSPCLSTFNEPSGQISTNSKVSKSKRKSSSSKNVGTNQSSSQKATRKKSPKTNKGTDKPQGKNSRQAPKSTRKGKNAVGVNGEKVPAVGGRAVPQLSTVALATKGLAEGTQHCGPAGVKLGKHNGLSGEWPLGKEGGTGWSEPSLGNATSLLDDDQREFEEPSNILSNIASGMADVQRFMMASIEPLWGPVSHNSVPDIFRSPESNSLKLKTLKILAGTSQESKKKANGGSPGAAKNHKSNNKGSSKNSKAATCDSSRPNCSTGFTTDIHAPFFDKNYSNLSTLGNNGPTHKKLYRHKSSSKSLRDENCKIKRMDREQPHKDPPVTAAFEKLR
SIO_010081: NEXMIF
subclass of: SO_0000673
so part of: NEXMIF
location: complement(join(1011278..1015560,1019220..1019295))
location: region:1011278-1019295:-1
so has part: feature:1019220-1019295:-1:exon
so has part: feature:1011278-1015560:-1:exon

XP_032557951.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1019220-1019295:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1011278-1015560:-1:exon

NEXMIF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: NEXMIF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurite extension and migration factor
translation: MDDQQEQDCASEDQETILINGVKENESHALGGNERPCSEATVPFPALTAAPRENHACHRAPPAKKPCLLSPPSPLRLTDVPEHTSDDSSAHAISLTSCVTKGMSSWSLPGDCEKAPFTMMEPGGMSALTGDCLMQPSRTCLGCFIESKDGIDAEPGISLKVGDINRDYDTCSVSDIGIHCMSTGETMRYGDQLLSDQLLSFPMHKSRAADKRDAEKSDSDSEDPTQKNYYEGLLLDKCNGEEPLLTNPNQEWGYFESFISESKIELLDLCSKNELSVNLFSEEDVDNYMFDDDDSTLGSDVCSLKIRYESFQDNVREKTTTLQEDAQFNFFPSVFSNCTKRDSRSTLKRGPSGATDPSQFKSEEGIIWGEEEEDGEEEDGEEEEKAALNKSCNSTEMVQYVGSKRSHFLDSVNSTEDSGEFSDDSTCTESSYDVLRDIKDCSRYLARDHSGSFIQQNYGLRAKRKVRYSDDYLYDVDSIENEKILDKKEWLPDGPKEEDDDEWCPKKRRKVSRKEPPVIIKYIIINRFKGEKHMLVKLSKVDANETTVTLNEELLSKYKKLAPLKGFWQERQQSRLDLLRSSLYHKQNFYLNGSDASFLPHPRKRKCKLANRHRIQRIKAIEQSVNKLGSCSSDHKQPCSSKEDVGLKGLPALAIATPSCANGLHVHDITGIATVKCKSQEREHKGTERKVLRRIKFKSEARLKCKKIKAATSTVEDSPALENQDPAARLKDENSPCASDSSHLPECHEDKVAKNSPFLPSTSSSDKPLPSANITTNVPLIPGGYLQTLLDASDLSSNTGIPYFAQHPSEQPQHPLPSIVRPEKPFPALQPAQSCVLSPPSESELQQSPGHLEMEQSSFGSLWPAKAGSDRQDFPGDLPEAAGLPGEFGSGGTPGTDGLPASGYTQVNLNSGKLLYQKNYMPDSQQVQSDDSYQSCHFNNGEGRFHFQRGTLSTDDGRLISFDSVGSLSVSSSNYSSLSLKSCEKDGEDDINDDFLAHCSPKLVIQQSIDEITPLKESTDLLDISNFTPDRFRQSSLSEMSPPDTPNLSPQIAGSDAKPLGTLKGFQESPQPALNSSEKVKWNCGVLQTEDQADNGFALNNHQFQFHMFNDEDSVSLLEKSPCLSTFNEPSGQISTNSKVSKSKRKSSSSKNVGTNQSSSQKATRKKSPKTNKGTDKPQGKNSRQAPKSTRKGKNAVGVNGEKVPAVGGRAVPQLSTVALATKGLAEGTQHCGPAGVKLGKHNGLSGEWPLGKEGGTGWSEPSLGNATSLLDDDQREFEEPSNILSNIASGMADVQRFMMASIEPLWGPVSHNSVPDIFRSPESNSLKLKTLKILAGTSQESKKKANGGSPGAAKNHKSNNKGSSKNSKAATCDSSRPNCSTGFTTDIHAPFFDKNYSNLSTLGNNGPTHKKLYRHKSSSKSLRDENCKIKRMDREQPHKDPPVTAAFEKLR
SIO_010081: NEXMIF
subclass of: SO_0000673
so part of: NEXMIF
location: complement(join(1011278..1015560,1019220..1019295))
location: region:1011278-1019295:-1
so has part: feature:1019220-1019295:-1:exon
so has part: feature:1011278-1015560:-1:exon

XP_032557952.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1019220-1019295:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1011278-1015560:-1:exon

ABCB7
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: ABCB7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1191318..1231793)
location: region:1191318-1231793:-1
so has part: feature:1191318-1231793:-1:exon
subclass of: SO_0000010

116793768
type: Gene
SIO_000068: ncbigene

position:1191318:-1
position: 1191318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1231793:-1
position: 1231793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1191318-1231793:-1:exon

ABCB7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ABCB7
product: ATP binding cassette subfamily B member 7, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 12 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032701850.1
SIO_010081: ABCB7
subclass of: SO_0000673
so part of: ABCB7
location: complement(join(1191318..1192819,1195409..1195639,1198206..1198313,1199886..1199989,1203547..1203718,1204200..1204329,1204496..1204659,1205188..1205345,1206770..1206944,1207572..1207659,1207845..1207933,1209174..1209442,1210309..1210441,1217919..1218038,1223336..1223422,1224927..1225004,1231629..1231793))
location: region:1191318-1231793:-1
so has part: feature:1231629-1231793:-1:exon
so has part: feature:1224927-1225004:-1:exon
so has part: feature:1223336-1223422:-1:exon
so has part: feature:1217919-1218038:-1:exon
so has part: feature:1210309-1210441:-1:exon
so has part: feature:1209174-1209442:-1:exon
so has part: feature:1207845-1207933:-1:exon
so has part: feature:1207572-1207659:-1:exon
so has part: feature:1206770-1206944:-1:exon
so has part: feature:1205188-1205345:-1:exon
so has part: feature:1204496-1204659:-1:exon
so has part: feature:1204200-1204329:-1:exon
so has part: feature:1203547-1203718:-1:exon
so has part: feature:1199886-1199989:-1:exon
so has part: feature:1198206-1198313:-1:exon
so has part: feature:1195409-1195639:-1:exon
so has part: feature:1191318-1192819:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1231629-1231793:-1:exon

position:1231629:-1
position: 1231629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1224927-1225004:-1:exon

position:1224927:-1
position: 1224927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1225004:-1
position: 1225004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1223336-1223422:-1:exon

position:1223336:-1
position: 1223336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1223422:-1
position: 1223422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1217919-1218038:-1:exon

position:1217919:-1
position: 1217919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1218038:-1
position: 1218038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1210309-1210441:-1:exon

position:1210309:-1
position: 1210309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1210441:-1
position: 1210441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1209174-1209442:-1:exon

position:1209174:-1
position: 1209174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1209442:-1
position: 1209442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1207845-1207933:-1:exon

position:1207845:-1
position: 1207845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207933:-1
position: 1207933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1207572-1207659:-1:exon

position:1207572:-1
position: 1207572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207659:-1
position: 1207659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1206770-1206944:-1:exon

position:1206770:-1
position: 1206770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206944:-1
position: 1206944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1205188-1205345:-1:exon

position:1205188:-1
position: 1205188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205345:-1
position: 1205345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1204496-1204659:-1:exon

position:1204496:-1
position: 1204496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204659:-1
position: 1204659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1204200-1204329:-1:exon

position:1204200:-1
position: 1204200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204329:-1
position: 1204329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1203547-1203718:-1:exon

position:1203547:-1
position: 1203547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203718:-1
position: 1203718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1199886-1199989:-1:exon

position:1199886:-1
position: 1199886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1199989:-1
position: 1199989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1198206-1198313:-1:exon

position:1198206:-1
position: 1198206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1198313:-1
position: 1198313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1195409-1195639:-1:exon

position:1195409:-1
position: 1195409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1195639:-1
position: 1195639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1191318-1192819:-1:exon

position:1192819:-1
position: 1192819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ABCB7
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 296741
gene: ABCB7
product: ATP binding cassette subfamily B member 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_004359586.1
SIO_010081: ABCB7
so part of: ABCB7
location: complement(join(1191318..1192185,1192288..1195639,1198206..1198313,1199886..1199989,1203547..1203718,1204200..1204329,1204496..1204659,1205188..1205345,1206770..1206944,1207572..1207659,1207845..1207933,1209174..1209442,1210309..1210441,1217919..1218038,1223336..1223422,1224927..1225004,1231629..1231793))
location: region:1191318-1231793:-1
so has part: feature:1231629-1231793:-1:exon
so has part: feature:1224927-1225004:-1:exon
so has part: feature:1223336-1223422:-1:exon
so has part: feature:1217919-1218038:-1:exon
so has part: feature:1210309-1210441:-1:exon
so has part: feature:1209174-1209442:-1:exon
so has part: feature:1207845-1207933:-1:exon
so has part: feature:1207572-1207659:-1:exon
so has part: feature:1206770-1206944:-1:exon
so has part: feature:1205188-1205345:-1:exon
so has part: feature:1204496-1204659:-1:exon
so has part: feature:1204200-1204329:-1:exon
so has part: feature:1203547-1203718:-1:exon
so has part: feature:1199886-1199989:-1:exon
so has part: feature:1198206-1198313:-1:exon
so has part: feature:1192288-1195639:-1:exon
so has part: feature:1191318-1192185:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1231629-1231793:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1224927-1225004:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1223336-1223422:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1217919-1218038:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1210309-1210441:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1209174-1209442:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1207845-1207933:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1207572-1207659:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1206770-1206944:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1205188-1205345:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1204496-1204659:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1204200-1204329:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1203547-1203718:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1199886-1199989:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1198206-1198313:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1192288-1195639:-1:exon

position:1192288:-1
position: 1192288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1191318-1192185:-1:exon

position:1192185:-1
position: 1192185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ABCB7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ABCB7
product: ATP binding cassette subfamily B member 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_032701849.1
SIO_010081: ABCB7
subclass of: SO_0000673
so part of: ABCB7
location: complement(join(1191318..1195639,1198206..1198313,1199886..1199989,1203547..1203718,1204200..1204329,1204496..1204659,1205188..1205345,1206770..1206944,1207572..1207659,1207845..1207933,1209174..1209442,1210309..1210441,1217919..1218038,1223336..1223422,1224927..1225004,1231629..1231793))
location: region:1191318-1231793:-1
so has part: feature:1231629-1231793:-1:exon
so has part: feature:1224927-1225004:-1:exon
so has part: feature:1223336-1223422:-1:exon
so has part: feature:1217919-1218038:-1:exon
so has part: feature:1210309-1210441:-1:exon
so has part: feature:1209174-1209442:-1:exon
so has part: feature:1207845-1207933:-1:exon
so has part: feature:1207572-1207659:-1:exon
so has part: feature:1206770-1206944:-1:exon
so has part: feature:1205188-1205345:-1:exon
so has part: feature:1204496-1204659:-1:exon
so has part: feature:1204200-1204329:-1:exon
so has part: feature:1203547-1203718:-1:exon
so has part: feature:1199886-1199989:-1:exon
so has part: feature:1198206-1198313:-1:exon
so has part: feature:1191318-1195639:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1231629-1231793:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1224927-1225004:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1223336-1223422:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1217919-1218038:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1210309-1210441:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1209174-1209442:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1207845-1207933:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1207572-1207659:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1206770-1206944:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1205188-1205345:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1204496-1204659:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1204200-1204329:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1203547-1203718:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1199886-1199989:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1198206-1198313:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1191318-1195639:-1:exon

ABCB7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ABCB7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-binding cassette sub-family B member 7, mitochondrial
translation: MAVLGAPRGLVAAASRKRRLLLALTLLRPPPAAACAAGAIAGTGRRARANPAGGQIPPICRQRSWQGLAGDYSRPLLEPSEILPRWRLIEKRMCWHGHAGGGLHTDPKEGLREIDAKKIIRAMLSYVWPQDRPDLRARVALSLGFLASAKAMNILVPFMFKYAVDNLNQVSGDVLNLGDAPSTVATLATAVLVGYGISRAGAALFNEARNAVFGKVAQNSIRRIAKNVFLHLHNLDLAFHLSRQTGALSKTIDRGTRGISFVLSALVFNLGPTMFEVALVSGILYYKCGAEFALVTLGTLGAYAAFTIGITQWRTKFRIEMNKADNDAGNAAIDSLLNYETVKYFNNEKYEAQRYDEFLKIYENASLKTTSTLALLNFGQSAIFSVGLTAIMVLASQGIVAGSLSVGDLVMVNGLLFQLSLPLNFLGTVYRETRQALIDMNTLFTLLSVDTKIKDKELAPPLQITPQTAAIAFDNVHFEYLEGQKVLSGVSFEVPAGKKVAIVGGSGSGKSTIVRLLFRFYEPQKGNIYVAGQNIQDVSLESLRKAIGVVPQDAVLFHNTIYYNLLYGNTGASPEEVYAVARLAGIHDAILRMPNGYNTQVGERGLKLSGGEKQRVAIARAMLKDPHIFLYDEATSSLDSITEENILKAMRAMVKHRTSIFIAHRLSTVVDADEIIVLDQGKVVERGTHTELLASPSNLYSEMWHTQSSKVLHSHSNPSWEERNNRTSKEEERKKLEEEIMNSVKGCGNCSC
SIO_010081: ABCB7
subclass of: SO_0000673
so part of: ABCB7
location: complement(join(1195421..1195639,1198206..1198313,1199886..1199989,1203547..1203718,1204200..1204329,1204496..1204659,1205188..1205345,1206770..1206944,1207572..1207659,1207845..1207933,1209174..1209442,1210309..1210441,1217919..1218038,1223336..1223422,1224927..1225004,1231629..1231793))
location: region:1195421-1231793:-1
so has part: feature:1231629-1231793:-1:exon
so has part: feature:1224927-1225004:-1:exon
so has part: feature:1223336-1223422:-1:exon
so has part: feature:1217919-1218038:-1:exon
so has part: feature:1210309-1210441:-1:exon
so has part: feature:1209174-1209442:-1:exon
so has part: feature:1207845-1207933:-1:exon
so has part: feature:1207572-1207659:-1:exon
so has part: feature:1206770-1206944:-1:exon
so has part: feature:1205188-1205345:-1:exon
so has part: feature:1204496-1204659:-1:exon
so has part: feature:1204200-1204329:-1:exon
so has part: feature:1203547-1203718:-1:exon
so has part: feature:1199886-1199989:-1:exon
so has part: feature:1198206-1198313:-1:exon
so has part: feature:1195421-1195639:-1:exon

XP_032557740.1
type: Protein
SIO_000068: ncbiprotein

position:1195421:-1
position: 1195421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1231629-1231793:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1224927-1225004:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1223336-1223422:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1217919-1218038:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1210309-1210441:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1209174-1209442:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1207845-1207933:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1207572-1207659:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1206770-1206944:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1205188-1205345:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1204496-1204659:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1204200-1204329:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1203547-1203718:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1199886-1199989:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1198206-1198313:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1195421-1195639:-1:exon

ABCB7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ABCB7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-binding cassette sub-family B member 7, mitochondrial
translation: MAVLGAPRGLVAAASRKRRLLLALTLLRPPPAAACAAGAIAGTGRRARANPAGGQIPPICRQRSWQGLAGDYSRPLLEPSEILPRWRLIEKRMCWHGHAGGGLHTDPKEGLREIDAKKIIRAMLSYVWPQDRPDLRARVALSLGFLASAKAMNILVPFMFKYAVDNLNQVSGDVLNLGDAPSTVATLATAVLVGYGISRAGAALFNEARNAVFGKVAQNSIRRIAKNVFLHLHNLDLAFHLSRQTGALSKTIDRGTRGISFVLSALVFNLGPTMFEVALVSGILYYKCGAEFALVTLGTLGAYAAFTIGITQWRTKFRIEMNKADNDAGNAAIDSLLNYETVKYFNNEKYEAQRYDEFLKIYENASLKTTSTLALLNFGQSAIFSVGLTAIMVLASQGIVAGSLSVGDLVMVNGLLFQLSLPLNFLGTVYRETRQALIDMNTLFTLLSVDTKIKDKELAPPLQITPQTAAIAFDNVHFEYLEGQKVLSGVSFEVPAGKKVAIVGGSGSGKSTIVRLLFRFYEPQKGNIYVAGQNIQDVSLESLRKAIGVVPQDAVLFHNTIYYNLLYGNTGASPEEVYAVARLAGIHDAILRMPNGYNTQVGERGLKLSGGEKQRVAIARAMLKDPHIFLYDEATSSLDSITEENILKAMRAMVKHRTSIFIAHRLSTVVDADEIIVLDQGKVVERGTHTELLASPSNLYSEMWHTQSSKVLHSHSNPSWEERNNRTSKEEERKKLEEEIMNSVKGCGNCSC
SIO_010081: ABCB7
subclass of: SO_0000673
so part of: ABCB7
location: complement(join(1195421..1195639,1198206..1198313,1199886..1199989,1203547..1203718,1204200..1204329,1204496..1204659,1205188..1205345,1206770..1206944,1207572..1207659,1207845..1207933,1209174..1209442,1210309..1210441,1217919..1218038,1223336..1223422,1224927..1225004,1231629..1231793))
location: region:1195421-1231793:-1
so has part: feature:1231629-1231793:-1:exon
so has part: feature:1224927-1225004:-1:exon
so has part: feature:1223336-1223422:-1:exon
so has part: feature:1217919-1218038:-1:exon
so has part: feature:1210309-1210441:-1:exon
so has part: feature:1209174-1209442:-1:exon
so has part: feature:1207845-1207933:-1:exon
so has part: feature:1207572-1207659:-1:exon
so has part: feature:1206770-1206944:-1:exon
so has part: feature:1205188-1205345:-1:exon
so has part: feature:1204496-1204659:-1:exon
so has part: feature:1204200-1204329:-1:exon
so has part: feature:1203547-1203718:-1:exon
so has part: feature:1199886-1199989:-1:exon
so has part: feature:1198206-1198313:-1:exon
so has part: feature:1195421-1195639:-1:exon

XP_032557741.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1231629-1231793:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1224927-1225004:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1223336-1223422:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1217919-1218038:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1210309-1210441:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1209174-1209442:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1207845-1207933:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1207572-1207659:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1206770-1206944:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1205188-1205345:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1204496-1204659:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1204200-1204329:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1203547-1203718:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1199886-1199989:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1198206-1198313:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1195421-1195639:-1:exon

UPRT
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: UPRT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1239639..1254867
location: region:1239639-1254867:1
so has part: feature:1239639-1254867:1:exon
subclass of: SO_0000010

116793987
type: Gene
SIO_000068: ncbigene

position:1239639:1
position: 1239639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1254867:1
position: 1254867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1239639-1254867:1:exon

UPRT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: UPRT
product: uracil phosphoribosyltransferase homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 8 ESTs, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_032702269.1
SIO_010081: UPRT
subclass of: SO_0000673
so part of: UPRT
location: join(1239639..1239949,1245091..1245133,1249726..1249795,1251730..1251792,1252814..1252975,1253584..1253682,1254477..1254867)
location: region:1239639-1254867:1
so has part: feature:1239639-1239949:1:exon
so has part: feature:1245091-1245133:1:exon
so has part: feature:1249726-1249795:1:exon
so has part: feature:1251730-1251792:1:exon
so has part: feature:1252814-1252975:1:exon
so has part: feature:1253584-1253682:1:exon
so has part: feature:1254477-1254867:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1239639-1239949:1:exon

position:1239949:1
position: 1239949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1245091-1245133:1:exon

position:1245091:1
position: 1245091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1245133:1
position: 1245133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1249726-1249795:1:exon

position:1249726:1
position: 1249726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1249795:1
position: 1249795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1251730-1251792:1:exon

position:1251730:1
position: 1251730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1251792:1
position: 1251792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1252814-1252975:1:exon

position:1252814:1
position: 1252814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1252975:1
position: 1252975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1253584-1253682:1:exon

position:1253584:1
position: 1253584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1253682:1
position: 1253682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1254477-1254867:1:exon

position:1254477:1
position: 1254477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UPRT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: UPRT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uracil phosphoribosyltransferase homolog
translation: MEAMPCQNQRLGPRPQEEPPPAATATATAGGGSRLIRFAEPSEDSGCPSPDSSSSSSSNGVVAAPPVPAGEGGAPAIGPQLKLLPMNDQLRELQTIIRDKKSSRGDFVFSADRLIRLVVEEGLNQLPYTECTVTTPTGHKYEGVRFEKGNCGVSIMRSGEAMEQGLRDCCRSIRIGKILIQSDEETQRAKVYYAKFPPDIYRRKVLLMYPILSTGNTVIEAVKVLVEHGVQPSVIILLSLFSTPHGAKSIIQEFPEITILTTEVHPVAPTHFGQKYFGTD
SIO_010081: UPRT
subclass of: SO_0000673
so part of: UPRT
location: join(1239651..1239949,1245091..1245133,1249726..1249795,1251730..1251792,1252814..1252975,1253584..1253682,1254477..1254583)
location: region:1239651-1254583:1
so has part: feature:1239651-1239949:1:exon
so has part: feature:1245091-1245133:1:exon
so has part: feature:1249726-1249795:1:exon
so has part: feature:1251730-1251792:1:exon
so has part: feature:1252814-1252975:1:exon
so has part: feature:1253584-1253682:1:exon
so has part: feature:1254477-1254583:1:exon

XP_032558160.1
type: Protein
SIO_000068: ncbiprotein

position:1239651:1
position: 1239651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1254583:1
position: 1254583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1239651-1239949:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1245091-1245133:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1249726-1249795:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1251730-1251792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1252814-1252975:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1253584-1253682:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1254477-1254583:1:exon

ZDHHC15
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: ZDHHC15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1255816..1278319)
location: region:1255816-1278319:-1
so has part: feature:1255816-1278319:-1:exon
subclass of: SO_0000010

116793985
type: Gene
SIO_000068: ncbigene

position:1255816:-1
position: 1255816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1278319:-1
position: 1278319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1255816-1278319:-1:exon

ZDHHC15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ZDHHC15
product: zinc finger DHHC-type palmitoyltransferase 15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 31 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032702266.1
SIO_010081: ZDHHC15
subclass of: SO_0000673
so part of: ZDHHC15
location: complement(join(1255816..1262586,1263651..1263733,1265818..1265927,1266532..1266658,1267826..1267958,1269149..1269269,1270330..1270362,1270734..1270803,1271869..1271989,1272683..1272777,1274862..1274888,1278184..1278319))
location: region:1255816-1278319:-1
so has part: feature:1278184-1278319:-1:exon
so has part: feature:1274862-1274888:-1:exon
so has part: feature:1272683-1272777:-1:exon
so has part: feature:1271869-1271989:-1:exon
so has part: feature:1270734-1270803:-1:exon
so has part: feature:1270330-1270362:-1:exon
so has part: feature:1269149-1269269:-1:exon
so has part: feature:1267826-1267958:-1:exon
so has part: feature:1266532-1266658:-1:exon
so has part: feature:1265818-1265927:-1:exon
so has part: feature:1263651-1263733:-1:exon
so has part: feature:1255816-1262586:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1278184-1278319:-1:exon

position:1278184:-1
position: 1278184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1274862-1274888:-1:exon

position:1274862:-1
position: 1274862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1274888:-1
position: 1274888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1272683-1272777:-1:exon

position:1272683:-1
position: 1272683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1272777:-1
position: 1272777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1271869-1271989:-1:exon

position:1271869:-1
position: 1271869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1271989:-1
position: 1271989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1270734-1270803:-1:exon

position:1270734:-1
position: 1270734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1270803:-1
position: 1270803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1270330-1270362:-1:exon

position:1270330:-1
position: 1270330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1270362:-1
position: 1270362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1269149-1269269:-1:exon

position:1269149:-1
position: 1269149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1269269:-1
position: 1269269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1267826-1267958:-1:exon

position:1267826:-1
position: 1267826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1267958:-1
position: 1267958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1266532-1266658:-1:exon

position:1266532:-1
position: 1266532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1266658:-1
position: 1266658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1265818-1265927:-1:exon

position:1265818:-1
position: 1265818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1265927:-1
position: 1265927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1263651-1263733:-1:exon

position:1263651:-1
position: 1263651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1263733:-1
position: 1263733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1255816-1262586:-1:exon

position:1262586:-1
position: 1262586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZDHHC15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ZDHHC15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC15
translation: MCAGAMALWRGLRCCRRALAWLPVLLIALLLLWSYYGYVCELCLVTVSNPVEKVAYLVIFHILFVLFVWTYWKSVFTLPVQPDKKFHMSYADQERYENEERPEVQRQILAEIARKLPVYTRTGNGGIRFCDRCQLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLLFLAYSLLYCLYIAATVFKYFIKYWTGELTNGRSKFHILFLLFVAIMFFVSLMFLFGYHCWLVSRNRSTLEAFSAPVFQNGPDKNGFNLGFVKNLQQVFGEEKKLWLLPIASSQGDGHFFPMRASCEARNPLLANEEQWEEDGIDEEPQGSGEASALVIERET
SIO_010081: ZDHHC15
subclass of: SO_0000673
so part of: ZDHHC15
location: complement(join(1263690..1263733,1265818..1265927,1266532..1266658,1267826..1267958,1269149..1269269,1270330..1270362,1270734..1270803,1271869..1271989,1272683..1272777,1274862..1274888,1278184..1278316))
location: region:1263690-1278316:-1
so has part: feature:1278184-1278316:-1:exon
so has part: feature:1274862-1274888:-1:exon
so has part: feature:1272683-1272777:-1:exon
so has part: feature:1271869-1271989:-1:exon
so has part: feature:1270734-1270803:-1:exon
so has part: feature:1270330-1270362:-1:exon
so has part: feature:1269149-1269269:-1:exon
so has part: feature:1267826-1267958:-1:exon
so has part: feature:1266532-1266658:-1:exon
so has part: feature:1265818-1265927:-1:exon
so has part: feature:1263690-1263733:-1:exon

XP_032558157.1
type: Protein
SIO_000068: ncbiprotein

position:1263690:-1
position: 1263690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1278316:-1
position: 1278316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1278184-1278316:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274862-1274888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1272683-1272777:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1271869-1271989:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1270734-1270803:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1270330-1270362:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1269149-1269269:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1267826-1267958:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1266532-1266658:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1265818-1265927:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1263690-1263733:-1:exon

LOC116793992
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793992
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1312746..1385184)
location: region:1312746-1385184:-1
so has part: feature:1312746-1385184:-1:exon
subclass of: SO_0000011

116793992
type: Gene
SIO_000068: ncbigene

position:1312746:-1
position: 1312746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1385184:-1
position: 1385184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1312746-1385184:-1:exon

LOC116793992
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116793992
product: uncharacterized LOC116793992
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004359664.1
SIO_010081: LOC116793992
subclass of: SO_0000673
so part of: LOC116793992
location: complement(join(1312746..1313001,1313740..1313806,1385052..1385184))
location: region:1312746-1385184:-1
so has part: feature:1385052-1385184:-1:exon
so has part: feature:1313740-1313806:-1:exon
so has part: feature:1312746-1313001:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1385052-1385184:-1:exon

position:1385052:-1
position: 1385052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1313740-1313806:-1:exon

position:1313740:-1
position: 1313740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1313806:-1
position: 1313806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1312746-1313001:-1:exon

position:1313001:-1
position: 1313001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116793991
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793991
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1414052..1415462)
location: region:1414052-1415462:-1
so has part: feature:1414052-1415462:-1:exon
subclass of: SO_0000011

116793991
type: Gene
SIO_000068: ncbigene

position:1414052:-1
position: 1414052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1415462:-1
position: 1415462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1414052-1415462:-1:exon

LOC116793991
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116793991
product: uncharacterized LOC116793991
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004359663.1
SIO_010081: LOC116793991
subclass of: SO_0000673
so part of: LOC116793991
location: complement(join(1414052..1414184,1414766..1414844,1415362..1415462))
location: region:1414052-1415462:-1
so has part: feature:1415362-1415462:-1:exon
so has part: feature:1414766-1414844:-1:exon
so has part: feature:1414052-1414184:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1415362-1415462:-1:exon

position:1415362:-1
position: 1415362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1414766-1414844:-1:exon

position:1414766:-1
position: 1414766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1414844:-1
position: 1414844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1414052-1414184:-1:exon

position:1414184:-1
position: 1414184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116794021
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794021
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1434207..1463537)
location: region:1434207-1463537:-1
so has part: feature:1434207-1463537:-1:exon
subclass of: SO_0000010

116794021
type: Gene
SIO_000068: ncbigene

position:1434207:-1
position: 1434207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1463537:-1
position: 1463537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1434207-1463537:-1:exon

LOC116794021
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794021
product: translation initiation factor IF-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 76% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032702336.1
SIO_010081: LOC116794021
subclass of: SO_0000673
so part of: LOC116794021
location: complement(join(1434207..1434976,1435498..1435582,1462702..1463151,1463365..1463537))
location: region:1434207-1463537:-1
so has part: feature:1463365-1463537:-1:exon
so has part: feature:1462702-1463151:-1:exon
so has part: feature:1435498-1435582:-1:exon
so has part: feature:1434207-1434976:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1463365-1463537:-1:exon

position:1463365:-1
position: 1463365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1462702-1463151:-1:exon

position:1462702:-1
position: 1462702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1463151:-1
position: 1463151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1435498-1435582:-1:exon

position:1435498:-1
position: 1435498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1435582:-1
position: 1435582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1434207-1434976:-1:exon

position:1434976:-1
position: 1434976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116794021
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794021
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translation initiation factor IF-2-like
translation: MEPPHKPAPAPPAPHRPRPRPRSRAPGHPSGRRCRRLSRGRAPTQQLPPNGHGGKNNTHRTRGSSRRSRAGRGGGTGAARARPGRAGPRAGRARARPPPPCPAGGAALAPPGARGGPAGAAEAGPGSGAGLAGPRAGVSPAPSSVPRQGTETPQTSSKHPKLPPSHQPALPRRLLRGASACRGHVPLSRFLPRRVPDVGLISMGSLPRKTAHQSCGLWMRIRTHCSVHGREGTDHWNLEMC
SIO_010081: LOC116794021
subclass of: SO_0000673
so part of: LOC116794021
location: complement(join(1434959..1434976,1435498..1435582,1462702..1463151,1463365..1463537))
location: region:1434959-1463537:-1
so has part: feature:1463365-1463537:-1:exon
so has part: feature:1462702-1463151:-1:exon
so has part: feature:1435498-1435582:-1:exon
so has part: feature:1434959-1434976:-1:exon

XP_032558227.1
type: Protein
SIO_000068: ncbiprotein

position:1434959:-1
position: 1434959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1463365-1463537:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1462702-1463151:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1435498-1435582:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1434959-1434976:-1:exon

LOC116793993
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793993
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1438737..1440211)
location: region:1438737-1440211:-1
so has part: feature:1438737-1440211:-1:exon
subclass of: SO_0000011

116793993
type: Gene
SIO_000068: ncbigene

position:1438737:-1
position: 1438737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1440211:-1
position: 1440211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1438737-1440211:-1:exon

LOC116793993
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116793993
product: uncharacterized LOC116793993
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004359665.1
SIO_010081: LOC116793993
subclass of: SO_0000673
so part of: LOC116793993
location: complement(join(1438737..1439103,1440089..1440211))
location: region:1438737-1440211:-1
so has part: feature:1440089-1440211:-1:exon
so has part: feature:1438737-1439103:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1440089-1440211:-1:exon

position:1440089:-1
position: 1440089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1438737-1439103:-1:exon

position:1439103:-1
position: 1439103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FGF16
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: FGF16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1463963..1474972
location: region:1463963-1474972:1
so has part: feature:1463963-1474972:1:exon
subclass of: SO_0000010

116793988
type: Gene
SIO_000068: ncbigene

position:1463963:1
position: 1463963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1474972:1
position: 1474972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1463963-1474972:1:exon

FGF16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: FGF16
product: fibroblast growth factor 16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 12 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_032702270.1
SIO_010081: FGF16
subclass of: SO_0000673
so part of: FGF16
location: join(1463963..1464239,1470510..1470613,1474402..1474972)
location: region:1463963-1474972:1
so has part: feature:1463963-1464239:1:exon
so has part: feature:1470510-1470613:1:exon
so has part: feature:1474402-1474972:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1463963-1464239:1:exon

position:1464239:1
position: 1464239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1470510-1470613:1:exon

position:1470510:1
position: 1470510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1470613:1
position: 1470613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1474402-1474972:1:exon

position:1474402:1
position: 1474402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGF16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: FGF16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 16
translation: MAEVGGFLGALDPDLHGFPPALGAGLPLADSPGFLNERLGQIEGRLQRGSPTDFAHLKGILRRRQLYCRTGFHLEIFPNGTVQGTRQDHSRFGILEFISLAVGLVSIRGVDSGLYLGMNERGELYGSKKLTRECVFREQFEENWYNTYASTLYKHPDSERQFYVALNKDGSPREGYRTKRHQKFTHFLPRPVDPAKIPAMYRDLFHYR
SIO_010081: FGF16
subclass of: SO_0000673
so part of: FGF16
location: join(1463963..1464239,1470510..1470613,1474402..1474647)
location: region:1463963-1474647:1
so has part: feature:1463963-1464239:1:exon
so has part: feature:1470510-1470613:1:exon
so has part: feature:1474402-1474647:1:exon

XP_032558161.1
type: Protein
SIO_000068: ncbiprotein

position:1474647:1
position: 1474647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1463963-1464239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1470510-1470613:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1474402-1474647:1:exon

ATRX
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: ATRX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1480136..1560104)
location: region:1480136-1560104:-1
so has part: feature:1480136-1560104:-1:exon
subclass of: SO_0000010

116793982
type: Gene
SIO_000068: ncbigene

position:1480136:-1
position: 1480136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1560104:-1
position: 1560104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1480136-1560104:-1:exon

ATRX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ATRX
product: ATRX chromatin remodeler, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 65 ESTs, 7 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032702253.1
SIO_010081: ATRX
subclass of: SO_0000673
so part of: ATRX
location: complement(join(1480136..1483008,1483758..1483886,1484373..1484468,1485016..1485138,1485778..1485927,1492998..1493192,1494537..1494714,1495771..1495879,1497849..1497952,1498240..1498393,1499317..1499486,1499650..1499738,1500032..1500162,1502988..1503105,1505002..1505177,1505408..1505545,1510291..1510468,1510664..1510810,1515142..1515251,1515637..1515778,1516173..1516352,1516952..1517060,1517529..1517622,1519193..1519405,1519924..1520054,1525973..1526051,1529669..1532571,1533459..1533526,1535644..1535753,1539178..1539297,1543363..1543487,1545034..1545086,1546481..1546536,1549375..1549487,1559996..1560104))
location: region:1480136-1560104:-1
so has part: feature:1559996-1560104:-1:exon
so has part: feature:1549375-1549487:-1:exon
so has part: feature:1546481-1546536:-1:exon
so has part: feature:1545034-1545086:-1:exon
so has part: feature:1543363-1543487:-1:exon
so has part: feature:1539178-1539297:-1:exon
so has part: feature:1535644-1535753:-1:exon
so has part: feature:1533459-1533526:-1:exon
so has part: feature:1529669-1532571:-1:exon
so has part: feature:1525973-1526051:-1:exon
so has part: feature:1519924-1520054:-1:exon
so has part: feature:1519193-1519405:-1:exon
so has part: feature:1517529-1517622:-1:exon
so has part: feature:1516952-1517060:-1:exon
so has part: feature:1516173-1516352:-1:exon
so has part: feature:1515637-1515778:-1:exon
so has part: feature:1515142-1515251:-1:exon
so has part: feature:1510664-1510810:-1:exon
so has part: feature:1510291-1510468:-1:exon
so has part: feature:1505408-1505545:-1:exon
so has part: feature:1505002-1505177:-1:exon
so has part: feature:1502988-1503105:-1:exon
so has part: feature:1500032-1500162:-1:exon
so has part: feature:1499650-1499738:-1:exon
so has part: feature:1499317-1499486:-1:exon
so has part: feature:1498240-1498393:-1:exon
so has part: feature:1497849-1497952:-1:exon
so has part: feature:1495771-1495879:-1:exon
so has part: feature:1494537-1494714:-1:exon
so has part: feature:1492998-1493192:-1:exon
so has part: feature:1485778-1485927:-1:exon
so has part: feature:1485016-1485138:-1:exon
so has part: feature:1484373-1484468:-1:exon
so has part: feature:1483758-1483886:-1:exon
so has part: feature:1480136-1483008:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1559996-1560104:-1:exon

position:1559996:-1
position: 1559996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1549375-1549487:-1:exon

position:1549375:-1
position: 1549375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1549487:-1
position: 1549487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1546481-1546536:-1:exon

position:1546481:-1
position: 1546481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1546536:-1
position: 1546536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1545034-1545086:-1:exon

position:1545034:-1
position: 1545034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1545086:-1
position: 1545086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1543363-1543487:-1:exon

position:1543363:-1
position: 1543363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1543487:-1
position: 1543487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1539178-1539297:-1:exon

position:1539178:-1
position: 1539178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1539297:-1
position: 1539297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1535644-1535753:-1:exon

position:1535644:-1
position: 1535644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1535753:-1
position: 1535753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1533459-1533526:-1:exon

position:1533459:-1
position: 1533459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1533526:-1
position: 1533526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1529669-1532571:-1:exon

position:1529669:-1
position: 1529669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1532571:-1
position: 1532571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1525973-1526051:-1:exon

position:1525973:-1
position: 1525973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1526051:-1
position: 1526051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1519924-1520054:-1:exon

position:1519924:-1
position: 1519924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1520054:-1
position: 1520054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1519193-1519405:-1:exon

position:1519193:-1
position: 1519193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1519405:-1
position: 1519405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1517529-1517622:-1:exon

position:1517529:-1
position: 1517529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1517622:-1
position: 1517622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1516952-1517060:-1:exon

position:1516952:-1
position: 1516952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1517060:-1
position: 1517060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1516173-1516352:-1:exon

position:1516173:-1
position: 1516173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1516352:-1
position: 1516352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1515637-1515778:-1:exon

position:1515637:-1
position: 1515637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1515778:-1
position: 1515778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1515142-1515251:-1:exon

position:1515142:-1
position: 1515142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1515251:-1
position: 1515251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1510664-1510810:-1:exon

position:1510664:-1
position: 1510664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1510810:-1
position: 1510810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1510291-1510468:-1:exon

position:1510291:-1
position: 1510291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1510468:-1
position: 1510468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1505408-1505545:-1:exon

position:1505408:-1
position: 1505408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1505545:-1
position: 1505545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1505002-1505177:-1:exon

position:1505002:-1
position: 1505002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1505177:-1
position: 1505177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1502988-1503105:-1:exon

position:1502988:-1
position: 1502988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1503105:-1
position: 1503105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1500032-1500162:-1:exon

position:1500032:-1
position: 1500032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1500162:-1
position: 1500162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1499650-1499738:-1:exon

position:1499650:-1
position: 1499650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1499738:-1
position: 1499738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1499317-1499486:-1:exon

position:1499317:-1
position: 1499317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1499486:-1
position: 1499486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1498240-1498393:-1:exon

position:1498240:-1
position: 1498240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1498393:-1
position: 1498393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1497849-1497952:-1:exon

position:1497849:-1
position: 1497849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1497952:-1
position: 1497952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1495771-1495879:-1:exon

position:1495771:-1
position: 1495771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1495879:-1
position: 1495879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1494537-1494714:-1:exon

position:1494537:-1
position: 1494537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1494714:-1
position: 1494714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1492998-1493192:-1:exon

position:1492998:-1
position: 1492998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1493192:-1
position: 1493192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1485778-1485927:-1:exon

position:1485778:-1
position: 1485778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1485927:-1
position: 1485927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1485016-1485138:-1:exon

position:1485016:-1
position: 1485016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1485138:-1
position: 1485138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1484373-1484468:-1:exon

position:1484373:-1
position: 1484373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1484468:-1
position: 1484468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1483758-1483886:-1:exon

position:1483758:-1
position: 1483758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1483886:-1
position: 1483886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1480136-1483008:-1:exon

position:1483008:-1
position: 1483008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATRX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ATRX
product: ATRX chromatin remodeler, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 59 ESTs, 6 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032702254.1
SIO_010081: ATRX
subclass of: SO_0000673
so part of: ATRX
location: complement(join(1480322..1483008,1483758..1483886,1484373..1484468,1485016..1485138,1485778..1485927,1492998..1493192,1494537..1494714,1495771..1495879,1497849..1497952,1498240..1498393,1499317..1499486,1499650..1499738,1500032..1500162,1502988..1503105,1505002..1505177,1505408..1505545,1510291..1510468,1510664..1510810,1515142..1515251,1515637..1515778,1516173..1516352,1516952..1517060,1517529..1517622,1519193..1519405,1519924..1520054,1525973..1526051,1529669..1532571,1533459..1533526,1535644..1535753,1543363..1543487,1545034..1545086,1546481..1546536,1549375..1549487,1559996..1560104))
location: region:1480322-1560104:-1
so has part: feature:1559996-1560104:-1:exon
so has part: feature:1549375-1549487:-1:exon
so has part: feature:1546481-1546536:-1:exon
so has part: feature:1545034-1545086:-1:exon
so has part: feature:1543363-1543487:-1:exon
so has part: feature:1535644-1535753:-1:exon
so has part: feature:1533459-1533526:-1:exon
so has part: feature:1529669-1532571:-1:exon
so has part: feature:1525973-1526051:-1:exon
so has part: feature:1519924-1520054:-1:exon
so has part: feature:1519193-1519405:-1:exon
so has part: feature:1517529-1517622:-1:exon
so has part: feature:1516952-1517060:-1:exon
so has part: feature:1516173-1516352:-1:exon
so has part: feature:1515637-1515778:-1:exon
so has part: feature:1515142-1515251:-1:exon
so has part: feature:1510664-1510810:-1:exon
so has part: feature:1510291-1510468:-1:exon
so has part: feature:1505408-1505545:-1:exon
so has part: feature:1505002-1505177:-1:exon
so has part: feature:1502988-1503105:-1:exon
so has part: feature:1500032-1500162:-1:exon
so has part: feature:1499650-1499738:-1:exon
so has part: feature:1499317-1499486:-1:exon
so has part: feature:1498240-1498393:-1:exon
so has part: feature:1497849-1497952:-1:exon
so has part: feature:1495771-1495879:-1:exon
so has part: feature:1494537-1494714:-1:exon
so has part: feature:1492998-1493192:-1:exon
so has part: feature:1485778-1485927:-1:exon
so has part: feature:1485016-1485138:-1:exon
so has part: feature:1484373-1484468:-1:exon
so has part: feature:1483758-1483886:-1:exon
so has part: feature:1480322-1483008:-1:exon

position:1480322:-1
position: 1480322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1559996-1560104:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1549375-1549487:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1546481-1546536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1545034-1545086:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1543363-1543487:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1535644-1535753:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1533459-1533526:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1529669-1532571:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1525973-1526051:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1519924-1520054:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1519193-1519405:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1517529-1517622:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1516952-1517060:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1516173-1516352:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1515637-1515778:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1515142-1515251:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1510664-1510810:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1510291-1510468:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1505408-1505545:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1505002-1505177:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1502988-1503105:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1500032-1500162:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1499650-1499738:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1499317-1499486:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1498240-1498393:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1497849-1497952:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1495771-1495879:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1494537-1494714:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1492998-1493192:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1485778-1485927:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1485016-1485138:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1484373-1484468:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1483758-1483886:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1480322-1483008:-1:exon

ATRX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ATRX
product: ATRX chromatin remodeler, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 ESTs, 6 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032702256.1
SIO_010081: ATRX
subclass of: SO_0000673
so part of: ATRX
location: complement(join(1480322..1483008,1483758..1483886,1484373..1484468,1485016..1485138,1485778..1485927,1492998..1493192,1494537..1494714,1495771..1495879,1497849..1497952,1498240..1498393,1499317..1499486,1499650..1499738,1500032..1500162,1502988..1503105,1505002..1505177,1505408..1505545,1510291..1510468,1510664..1510810,1515142..1515251,1515637..1515778,1516173..1516352,1516952..1517060,1517529..1517622,1519193..1519405,1519924..1520054,1525973..1526051,1529669..1532571,1533459..1533526,1543363..1543470))
location: region:1480322-1543470:-1
so has part: feature:1543363-1543470:-1:exon
so has part: feature:1533459-1533526:-1:exon
so has part: feature:1529669-1532571:-1:exon
so has part: feature:1525973-1526051:-1:exon
so has part: feature:1519924-1520054:-1:exon
so has part: feature:1519193-1519405:-1:exon
so has part: feature:1517529-1517622:-1:exon
so has part: feature:1516952-1517060:-1:exon
so has part: feature:1516173-1516352:-1:exon
so has part: feature:1515637-1515778:-1:exon
so has part: feature:1515142-1515251:-1:exon
so has part: feature:1510664-1510810:-1:exon
so has part: feature:1510291-1510468:-1:exon
so has part: feature:1505408-1505545:-1:exon
so has part: feature:1505002-1505177:-1:exon
so has part: feature:1502988-1503105:-1:exon
so has part: feature:1500032-1500162:-1:exon
so has part: feature:1499650-1499738:-1:exon
so has part: feature:1499317-1499486:-1:exon
so has part: feature:1498240-1498393:-1:exon
so has part: feature:1497849-1497952:-1:exon
so has part: feature:1495771-1495879:-1:exon
so has part: feature:1494537-1494714:-1:exon
so has part: feature:1492998-1493192:-1:exon
so has part: feature:1485778-1485927:-1:exon
so has part: feature:1485016-1485138:-1:exon
so has part: feature:1484373-1484468:-1:exon
so has part: feature:1483758-1483886:-1:exon
so has part: feature:1480322-1483008:-1:exon

position:1543470:-1
position: 1543470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1543363-1543470:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1533459-1533526:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1529669-1532571:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1525973-1526051:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1519924-1520054:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1519193-1519405:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1517529-1517622:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1516952-1517060:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1516173-1516352:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1515637-1515778:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1515142-1515251:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1510664-1510810:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1510291-1510468:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1505408-1505545:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1505002-1505177:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1502988-1503105:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1500032-1500162:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1499650-1499738:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1499317-1499486:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1498240-1498393:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1497849-1497952:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1495771-1495879:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1494537-1494714:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1492998-1493192:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1485778-1485927:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1485016-1485138:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1484373-1484468:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1483758-1483886:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1480322-1483008:-1:exon

ATRX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ATRX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcriptional regulator ATRX isoform X2
translation: MTAEPVSESKLNTLVQKLHDFLAHSSEESEDANSPPALSKNKSTGKSREPKGSPTSMENNRDEGSSSSERTKSLGLSRSKRKPTVVTKYVGSDDEQIVDETVNEDVSNENSENDVDMQSLPKEEGLHGIVSCTACGQQVNHFQKDSIYRHPTLKVLICKTCYKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTILDENNQWHCYICHPEPLLDLVTACDSVFENLEQLLQQNKKKIKVESEKSKIYDHTVKFSPKRNSANCNGEEKKLDNSYSGSLTYSYKALMVPKDLLKKTKKLVETTANLNSSFVSFLKNAAENVEISPTVQLCQLKAFKSVLSDMKKAHLALEEGLNLEIQALNVKIKDKNTKEKKTEVRSEKNEVKKDEGKEHVALEEDDTVQTPKKVVSEQPDSEPMDQSVPAVEQTDNKPTSGEEKKSGRNEEPQYEPNSTEALDMDIVSIPSSVPEDIFETLESAMEIQMPSDEQESGNTGADHETLNSNTKSNAPVKDAKGSTKLKSSAKGTKELVVKLTPVSLSEVTVKAEDRDNSLEKENKSVDAKPRAENCDPVKQNHNAGSEPSTENEAVLVEESDLRRSPRVKTTPLRRPTDMSPLTSNSEEDSNDMGSEKHKGKPAKQPRRKNDKRNPSDSAADGPNPDNLSESKKPYVLDQSSDSDEMPAVLKEAGMMSRSSSDIDSNSEAPANDQKTSDFQKNQPVKDENGKRKRKSSSSGSDLDAKRGKSAKNAAAAKKKRQNYSDSSNYDSELEKEIKMLSKIEAAKKPKKKYSRKEDSYDSSEEEQRKKVSSKRKVNRKKKKGKSSEDDDDVEKSSPEKELNHSSKDKKVGKRSSAKEKINRDSKEKSTKGKHDEYSDAEKSSLEKEESSPEGNKNKDLKKKKAQEDSSSESTEKSAKKEHKFESSKDRLKNKKGSENKVKKSEKLKKKSFKKEEDDSSSDGEKSSPEKGSCNSSENDKIKKEPVFTEKRNLRERVPKRVHIDLSSDTEKSPQKEESSSDDAMQRKKRTETKEKKKTSHKKKISKKEQNDSSSSDEESYEDSKKKTKRGSMKESKRSSLKKKVSKKKVVVTSSSSSDKEENDEQNSSGDGSSDEQKIRPVTESLMLSAGAGFCQSSGDEGEALSRTVPMEEEEDDDDDDPENRIAKKMLLEEIKANLSSDEDSSSDEEPEEGKKKPAKQPENTGDDGENEKEENKSVKEESNSESDSEEEESSKKPRYRHRLLRHKLTMSDGESGEDKKVVKRKDKKEGGKRRNRRKVSSDDSNDSEFHESAVSEEVSESEDDQRPRTRSAKKAEAEENQRSYKQKKKRRRIRVQEDSSSENDNKSNSENEDNDDSKSPGKGRKKIRKIIKDDKLRTETQNALKEEEERRKRIAERERERDKLREVIEIEDASPLKCPITTKLVLDEDEETKEPLVQVHRSIVTRLKPHQVDGVQFMWDCCCESVKKTKTSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFRTALVVCPLNTALNWLNEFEKWQEGLEDEERLEVCELATVKRPQERSYMLQHWQDEGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTLADVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKYEYVLEVRMTPIQCKLYQYYLDHLTGVGGGNEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDDFIASDSEETSMSLSSDDYAKKKKSKGKKVKKECSSSGSGSDNDVEVIKVWNSRSRGGGEGNAEDLSNNPSSTKSDEGKATSSSNPGSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEELGDKVLVFSQSLISLDLIEDFLELANREKTDRDKPPIYKGEGKWFRNIDYYRLDGSTTAQSRKKWAEEF…
SIO_010081: ATRX
subclass of: SO_0000673
so part of: ATRX
location: complement(join(1482730..1483008,1483758..1483886,1484373..1484468,1485016..1485138,1485778..1485927,1492998..1493192,1494537..1494714,1495771..1495879,1497849..1497952,1498240..1498393,1499317..1499486,1499650..1499738,1500032..1500162,1502988..1503105,1505002..1505177,1505408..1505545,1510291..1510468,1510664..1510810,1515142..1515251,1515637..1515778,1516173..1516352,1516952..1517060,1517529..1517622,1519193..1519405,1519924..1520054,1525973..1526051,1529669..1532571,1533459..1533526,1535644..1535753,1543363..1543487,1545034..1545086,1546481..1546536,1549375..1549487,1559996..1560015))
location: region:1482730-1560015:-1
so has part: feature:1559996-1560015:-1:exon
so has part: feature:1549375-1549487:-1:exon
so has part: feature:1546481-1546536:-1:exon
so has part: feature:1545034-1545086:-1:exon
so has part: feature:1543363-1543487:-1:exon
so has part: feature:1535644-1535753:-1:exon
so has part: feature:1533459-1533526:-1:exon
so has part: feature:1529669-1532571:-1:exon
so has part: feature:1525973-1526051:-1:exon
so has part: feature:1519924-1520054:-1:exon
so has part: feature:1519193-1519405:-1:exon
so has part: feature:1517529-1517622:-1:exon
so has part: feature:1516952-1517060:-1:exon
so has part: feature:1516173-1516352:-1:exon
so has part: feature:1515637-1515778:-1:exon
so has part: feature:1515142-1515251:-1:exon
so has part: feature:1510664-1510810:-1:exon
so has part: feature:1510291-1510468:-1:exon
so has part: feature:1505408-1505545:-1:exon
so has part: feature:1505002-1505177:-1:exon
so has part: feature:1502988-1503105:-1:exon
so has part: feature:1500032-1500162:-1:exon
so has part: feature:1499650-1499738:-1:exon
so has part: feature:1499317-1499486:-1:exon
so has part: feature:1498240-1498393:-1:exon
so has part: feature:1497849-1497952:-1:exon
so has part: feature:1495771-1495879:-1:exon
so has part: feature:1494537-1494714:-1:exon
so has part: feature:1492998-1493192:-1:exon
so has part: feature:1485778-1485927:-1:exon
so has part: feature:1485016-1485138:-1:exon
so has part: feature:1484373-1484468:-1:exon
so has part: feature:1483758-1483886:-1:exon
so has part: feature:1482730-1483008:-1:exon

XP_032558145.1
type: Protein
SIO_000068: ncbiprotein

position:1482730:-1
position: 1482730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1560015:-1
position: 1560015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1559996-1560015:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1549375-1549487:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1546481-1546536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1545034-1545086:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1543363-1543487:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1535644-1535753:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1533459-1533526:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1529669-1532571:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1525973-1526051:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1519924-1520054:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1519193-1519405:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1517529-1517622:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1516952-1517060:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1516173-1516352:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1515637-1515778:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1515142-1515251:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1510664-1510810:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1510291-1510468:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1505408-1505545:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1505002-1505177:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1502988-1503105:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1500032-1500162:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1499650-1499738:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1499317-1499486:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1498240-1498393:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1497849-1497952:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1495771-1495879:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1494537-1494714:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1492998-1493192:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1485778-1485927:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1485016-1485138:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1484373-1484468:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1483758-1483886:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1482730-1483008:-1:exon

ATRX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ATRX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcriptional regulator ATRX isoform X1
translation: MTAEPVSESKLNTLVQKLHDFLAHSSEESEDANSPPALSKNKSTGKSREPKGSPTSMENNRDEGSSSSERTKSLGLSRSKRKPTVVTKYVGSDDEQIVDETVNEDVSNENSENDVDMQSLPKGTVVVQPEPVLNEDKDDFKGPEFRSRNTVKMKPEAPKKRGEEGLHGIVSCTACGQQVNHFQKDSIYRHPTLKVLICKTCYKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTILDENNQWHCYICHPEPLLDLVTACDSVFENLEQLLQQNKKKIKVESEKSKIYDHTVKFSPKRNSANCNGEEKKLDNSYSGSLTYSYKALMVPKDLLKKTKKLVETTANLNSSFVSFLKNAAENVEISPTVQLCQLKAFKSVLSDMKKAHLALEEGLNLEIQALNVKIKDKNTKEKKTEVRSEKNEVKKDEGKEHVALEEDDTVQTPKKVVSEQPDSEPMDQSVPAVEQTDNKPTSGEEKKSGRNEEPQYEPNSTEALDMDIVSIPSSVPEDIFETLESAMEIQMPSDEQESGNTGADHETLNSNTKSNAPVKDAKGSTKLKSSAKGTKELVVKLTPVSLSEVTVKAEDRDNSLEKENKSVDAKPRAENCDPVKQNHNAGSEPSTENEAVLVEESDLRRSPRVKTTPLRRPTDMSPLTSNSEEDSNDMGSEKHKGKPAKQPRRKNDKRNPSDSAADGPNPDNLSESKKPYVLDQSSDSDEMPAVLKEAGMMSRSSSDIDSNSEAPANDQKTSDFQKNQPVKDENGKRKRKSSSSGSDLDAKRGKSAKNAAAAKKKRQNYSDSSNYDSELEKEIKMLSKIEAAKKPKKKYSRKEDSYDSSEEEQRKKVSSKRKVNRKKKKGKSSEDDDDVEKSSPEKELNHSSKDKKVGKRSSAKEKINRDSKEKSTKGKHDEYSDAEKSSLEKEESSPEGNKNKDLKKKKAQEDSSSESTEKSAKKEHKFESSKDRLKNKKGSENKVKKSEKLKKKSFKKEEDDSSSDGEKSSPEKGSCNSSENDKIKKEPVFTEKRNLRERVPKRVHIDLSSDTEKSPQKEESSSDDAMQRKKRTETKEKKKTSHKKKISKKEQNDSSSSDEESYEDSKKKTKRGSMKESKRSSLKKKVSKKKVVVTSSSSSDKEENDEQNSSGDGSSDEQKIRPVTESLMLSAGAGFCQSSGDEGEALSRTVPMEEEEDDDDDDPENRIAKKMLLEEIKANLSSDEDSSSDEEPEEGKKKPAKQPENTGDDGENEKEENKSVKEESNSESDSEEEESSKKPRYRHRLLRHKLTMSDGESGEDKKVVKRKDKKEGGKRRNRRKVSSDDSNDSEFHESAVSEEVSESEDDQRPRTRSAKKAEAEENQRSYKQKKKRRRIRVQEDSSSENDNKSNSENEDNDDSKSPGKGRKKIRKIIKDDKLRTETQNALKEEEERRKRIAERERERDKLREVIEIEDASPLKCPITTKLVLDEDEETKEPLVQVHRSIVTRLKPHQVDGVQFMWDCCCESVKKTKTSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFRTALVVCPLNTALNWLNEFEKWQEGLEDEERLEVCELATVKRPQERSYMLQHWQDEGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTLADVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKYEYVLEVRMTPIQCKLYQYYLDHLTGVGGGNEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDDFIASDSEETSMSLSSDDYAKKKKSKGKKVKKECSSSGSGSDNDVEVIKVWNSRSRGGGEGNAEDLSNNPSSTKSDEGKATSSSNPGSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEELGDKVLVFSQSLISLDLIEDFLELANREK…
SIO_010081: ATRX
subclass of: SO_0000673
so part of: ATRX
location: complement(join(1482730..1483008,1483758..1483886,1484373..1484468,1485016..1485138,1485778..1485927,1492998..1493192,1494537..1494714,1495771..1495879,1497849..1497952,1498240..1498393,1499317..1499486,1499650..1499738,1500032..1500162,1502988..1503105,1505002..1505177,1505408..1505545,1510291..1510468,1510664..1510810,1515142..1515251,1515637..1515778,1516173..1516352,1516952..1517060,1517529..1517622,1519193..1519405,1519924..1520054,1525973..1526051,1529669..1532571,1533459..1533526,1535644..1535753,1539178..1539297,1543363..1543487,1545034..1545086,1546481..1546536,1549375..1549487,1559996..1560015))
location: region:1482730-1560015:-1
so has part: feature:1559996-1560015:-1:exon
so has part: feature:1549375-1549487:-1:exon
so has part: feature:1546481-1546536:-1:exon
so has part: feature:1545034-1545086:-1:exon
so has part: feature:1543363-1543487:-1:exon
so has part: feature:1539178-1539297:-1:exon
so has part: feature:1535644-1535753:-1:exon
so has part: feature:1533459-1533526:-1:exon
so has part: feature:1529669-1532571:-1:exon
so has part: feature:1525973-1526051:-1:exon
so has part: feature:1519924-1520054:-1:exon
so has part: feature:1519193-1519405:-1:exon
so has part: feature:1517529-1517622:-1:exon
so has part: feature:1516952-1517060:-1:exon
so has part: feature:1516173-1516352:-1:exon
so has part: feature:1515637-1515778:-1:exon
so has part: feature:1515142-1515251:-1:exon
so has part: feature:1510664-1510810:-1:exon
so has part: feature:1510291-1510468:-1:exon
so has part: feature:1505408-1505545:-1:exon
so has part: feature:1505002-1505177:-1:exon
so has part: feature:1502988-1503105:-1:exon
so has part: feature:1500032-1500162:-1:exon
so has part: feature:1499650-1499738:-1:exon
so has part: feature:1499317-1499486:-1:exon
so has part: feature:1498240-1498393:-1:exon
so has part: feature:1497849-1497952:-1:exon
so has part: feature:1495771-1495879:-1:exon
so has part: feature:1494537-1494714:-1:exon
so has part: feature:1492998-1493192:-1:exon
so has part: feature:1485778-1485927:-1:exon
so has part: feature:1485016-1485138:-1:exon
so has part: feature:1484373-1484468:-1:exon
so has part: feature:1483758-1483886:-1:exon
so has part: feature:1482730-1483008:-1:exon

XP_032558144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1559996-1560015:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1549375-1549487:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1546481-1546536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1545034-1545086:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1543363-1543487:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1539178-1539297:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1535644-1535753:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1533459-1533526:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1529669-1532571:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1525973-1526051:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1519924-1520054:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1519193-1519405:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1517529-1517622:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1516952-1517060:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1516173-1516352:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1515637-1515778:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1515142-1515251:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1510664-1510810:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1510291-1510468:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1505408-1505545:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1505002-1505177:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1502988-1503105:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1500032-1500162:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1499650-1499738:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1499317-1499486:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1498240-1498393:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1497849-1497952:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1495771-1495879:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1494537-1494714:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1492998-1493192:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1485778-1485927:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1485016-1485138:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1484373-1484468:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1483758-1483886:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1482730-1483008:-1:exon

ATRX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ATRX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcriptional regulator ATRX isoform X4
translation: MSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTILDENNQWHCYICHPEPLLDLVTACDSVFENLEQLLQQNKKKIKVESEKSKIYDHTVKFSPKRNSANCNGEEKKLDNSYSGSLTYSYKALMVPKDLLKKTKKLVETTANLNSSFVSFLKNAAENVEISPTVQLCQLKAFKSVLSDMKKAHLALEEGLNLEIQALNVKIKDKNTKEKKTEVRSEKNEVKKDEGKEHVALEEDDTVQTPKKVVSEQPDSEPMDQSVPAVEQTDNKPTSGEEKKSGRNEEPQYEPNSTEALDMDIVSIPSSVPEDIFETLESAMEIQMPSDEQESGNTGADHETLNSNTKSNAPVKDAKGSTKLKSSAKGTKELVVKLTPVSLSEVTVKAEDRDNSLEKENKSVDAKPRAENCDPVKQNHNAGSEPSTENEAVLVEESDLRRSPRVKTTPLRRPTDMSPLTSNSEEDSNDMGSEKHKGKPAKQPRRKNDKRNPSDSAADGPNPDNLSESKKPYVLDQSSDSDEMPAVLKEAGMMSRSSSDIDSNSEAPANDQKTSDFQKNQPVKDENGKRKRKSSSSGSDLDAKRGKSAKNAAAAKKKRQNYSDSSNYDSELEKEIKMLSKIEAAKKPKKKYSRKEDSYDSSEEEQRKKVSSKRKVNRKKKKGKSSEDDDDVEKSSPEKELNHSSKDKKVGKRSSAKEKINRDSKEKSTKGKHDEYSDAEKSSLEKEESSPEGNKNKDLKKKKAQEDSSSESTEKSAKKEHKFESSKDRLKNKKGSENKVKKSEKLKKKSFKKEEDDSSSDGEKSSPEKGSCNSSENDKIKKEPVFTEKRNLRERVPKRVHIDLSSDTEKSPQKEESSSDDAMQRKKRTETKEKKKTSHKKKISKKEQNDSSSSDEESYEDSKKKTKRGSMKESKRSSLKKKVSKKKVVVTSSSSSDKEENDEQNSSGDGSSDEQKIRPVTESLMLSAGAGFCQSSGDEGEALSRTVPMEEEEDDDDDDPENRIAKKMLLEEIKANLSSDEDSSSDEEPEEGKKKPAKQPENTGDDGENEKEENKSVKEESNSESDSEEEESSKKPRYRHRLLRHKLTMSDGESGEDKKVVKRKDKKEGGKRRNRRKVSSDDSNDSEFHESAVSEEVSESEDDQRPRTRSAKKAEAEENQRSYKQKKKRRRIRVQEDSSSENDNKSNSENEDNDDSKSPGKGRKKIRKIIKDDKLRTETQNALKEEEERRKRIAERERERDKLREVIEIEDASPLKCPITTKLVLDEDEETKEPLVQVHRSIVTRLKPHQVDGVQFMWDCCCESVKKTKTSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFRTALVVCPLNTALNWLNEFEKWQEGLEDEERLEVCELATVKRPQERSYMLQHWQDEGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTLADVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKYEYVLEVRMTPIQCKLYQYYLDHLTGVGGGNEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDDFIASDSEETSMSLSSDDYAKKKKSKGKKVKKECSSSGSGSDNDVEVIKVWNSRSRGGGEGNAEDLSNNPSSTKSDEGKATSSSNPGSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEELGDKVLVFSQSLISLDLIEDFLELANREKTDRDKPPIYKGEGKWFRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQNKPVFVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKKKKRDTPMLPKDTILAELLQINKEYIVGYHEHDSLLDHKEEEELT…
SIO_010081: ATRX
subclass of: SO_0000673
so part of: ATRX
location: complement(join(1482730..1483008,1483758..1483886,1484373..1484468,1485016..1485138,1485778..1485927,1492998..1493192,1494537..1494714,1495771..1495879,1497849..1497952,1498240..1498393,1499317..1499486,1499650..1499738,1500032..1500162,1502988..1503105,1505002..1505177,1505408..1505545,1510291..1510468,1510664..1510810,1515142..1515251,1515637..1515778,1516173..1516352,1516952..1517060,1517529..1517622,1519193..1519405,1519924..1520054,1525973..1526051,1529669..1532571,1533459..1533508))
location: region:1482730-1533508:-1
so has part: feature:1533459-1533508:-1:exon
so has part: feature:1529669-1532571:-1:exon
so has part: feature:1525973-1526051:-1:exon
so has part: feature:1519924-1520054:-1:exon
so has part: feature:1519193-1519405:-1:exon
so has part: feature:1517529-1517622:-1:exon
so has part: feature:1516952-1517060:-1:exon
so has part: feature:1516173-1516352:-1:exon
so has part: feature:1515637-1515778:-1:exon
so has part: feature:1515142-1515251:-1:exon
so has part: feature:1510664-1510810:-1:exon
so has part: feature:1510291-1510468:-1:exon
so has part: feature:1505408-1505545:-1:exon
so has part: feature:1505002-1505177:-1:exon
so has part: feature:1502988-1503105:-1:exon
so has part: feature:1500032-1500162:-1:exon
so has part: feature:1499650-1499738:-1:exon
so has part: feature:1499317-1499486:-1:exon
so has part: feature:1498240-1498393:-1:exon
so has part: feature:1497849-1497952:-1:exon
so has part: feature:1495771-1495879:-1:exon
so has part: feature:1494537-1494714:-1:exon
so has part: feature:1492998-1493192:-1:exon
so has part: feature:1485778-1485927:-1:exon
so has part: feature:1485016-1485138:-1:exon
so has part: feature:1484373-1484468:-1:exon
so has part: feature:1483758-1483886:-1:exon
so has part: feature:1482730-1483008:-1:exon

XP_032558147.1
type: Protein
SIO_000068: ncbiprotein

position:1533508:-1
position: 1533508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1533459-1533508:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1529669-1532571:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1525973-1526051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1519924-1520054:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1519193-1519405:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1517529-1517622:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1516952-1517060:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1516173-1516352:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1515637-1515778:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1515142-1515251:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1510664-1510810:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1510291-1510468:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1505408-1505545:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1505002-1505177:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1502988-1503105:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1500032-1500162:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1499650-1499738:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1499317-1499486:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1498240-1498393:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1497849-1497952:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1495771-1495879:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1494537-1494714:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1492998-1493192:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1485778-1485927:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1485016-1485138:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1484373-1484468:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1483758-1483886:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1482730-1483008:-1:exon

ATRX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ATRX
product: ATRX chromatin remodeler, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032702255.1
SIO_010081: ATRX
subclass of: SO_0000673
so part of: ATRX
location: complement(join(1484372..1484468,1484566..1484649,1485016..1485138,1485778..1485927,1492998..1493192,1494537..1494714,1495771..1495879,1497849..1497952,1498240..1498393,1499317..1499486,1499650..1499738,1500032..1500162,1502988..1503105,1505002..1505177,1505408..1505545,1510291..1510468,1510664..1510810,1515142..1515251,1515637..1515778,1516173..1516352,1516952..1517060,1517529..1517622,1519193..1519405,1519924..1520054,1525973..1526051,1529669..1532571,1533459..1533526,1535644..1535753,1539178..1539297,1543363..1543487,1545034..1545086,1546481..1546536,1549375..1549487,1559996..1560104))
location: region:1484372-1560104:-1
so has part: feature:1559996-1560104:-1:exon
so has part: feature:1549375-1549487:-1:exon
so has part: feature:1546481-1546536:-1:exon
so has part: feature:1545034-1545086:-1:exon
so has part: feature:1543363-1543487:-1:exon
so has part: feature:1539178-1539297:-1:exon
so has part: feature:1535644-1535753:-1:exon
so has part: feature:1533459-1533526:-1:exon
so has part: feature:1529669-1532571:-1:exon
so has part: feature:1525973-1526051:-1:exon
so has part: feature:1519924-1520054:-1:exon
so has part: feature:1519193-1519405:-1:exon
so has part: feature:1517529-1517622:-1:exon
so has part: feature:1516952-1517060:-1:exon
so has part: feature:1516173-1516352:-1:exon
so has part: feature:1515637-1515778:-1:exon
so has part: feature:1515142-1515251:-1:exon
so has part: feature:1510664-1510810:-1:exon
so has part: feature:1510291-1510468:-1:exon
so has part: feature:1505408-1505545:-1:exon
so has part: feature:1505002-1505177:-1:exon
so has part: feature:1502988-1503105:-1:exon
so has part: feature:1500032-1500162:-1:exon
so has part: feature:1499650-1499738:-1:exon
so has part: feature:1499317-1499486:-1:exon
so has part: feature:1498240-1498393:-1:exon
so has part: feature:1497849-1497952:-1:exon
so has part: feature:1495771-1495879:-1:exon
so has part: feature:1494537-1494714:-1:exon
so has part: feature:1492998-1493192:-1:exon
so has part: feature:1485778-1485927:-1:exon
so has part: feature:1485016-1485138:-1:exon
so has part: feature:1484566-1484649:-1:exon
so has part: feature:1484372-1484468:-1:exon

position:1484372:-1
position: 1484372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1559996-1560104:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1549375-1549487:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1546481-1546536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1545034-1545086:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1543363-1543487:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1539178-1539297:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1535644-1535753:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1533459-1533526:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1529669-1532571:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1525973-1526051:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1519924-1520054:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1519193-1519405:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1517529-1517622:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1516952-1517060:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1516173-1516352:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1515637-1515778:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1515142-1515251:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1510664-1510810:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1510291-1510468:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1505408-1505545:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1505002-1505177:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1502988-1503105:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1500032-1500162:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1499650-1499738:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1499317-1499486:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1498240-1498393:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1497849-1497952:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1495771-1495879:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1494537-1494714:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1492998-1493192:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1485778-1485927:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1485016-1485138:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1484566-1484649:-1:exon

position:1484566:-1
position: 1484566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1484649:-1
position: 1484649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1484372-1484468:-1:exon

ATRX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ATRX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcriptional regulator ATRX isoform X3
translation: MTAEPVSESKLNTLVQKLHDFLAHSSEESEDANSPPALSKNKSTGKSREPKGSPTSMENNRDEGSSSSERTKSLGLSRSKRKPTVVTKYVGSDDEQIVDETVNEDVSNENSENDVDMQSLPKGTVVVQPEPVLNEDKDDFKGPEFRSRNTVKMKPEAPKKRGEEGLHGIVSCTACGQQVNHFQKDSIYRHPTLKVLICKTCYKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTILDENNQWHCYICHPEPLLDLVTACDSVFENLEQLLQQNKKKIKVESEKSKIYDHTVKFSPKRNSANCNGEEKKLDNSYSGSLTYSYKALMVPKDLLKKTKKLVETTANLNSSFVSFLKNAAENVEISPTVQLCQLKAFKSVLSDMKKAHLALEEGLNLEIQALNVKIKDKNTKEKKTEVRSEKNEVKKDEGKEHVALEEDDTVQTPKKVVSEQPDSEPMDQSVPAVEQTDNKPTSGEEKKSGRNEEPQYEPNSTEALDMDIVSIPSSVPEDIFETLESAMEIQMPSDEQESGNTGADHETLNSNTKSNAPVKDAKGSTKLKSSAKGTKELVVKLTPVSLSEVTVKAEDRDNSLEKENKSVDAKPRAENCDPVKQNHNAGSEPSTENEAVLVEESDLRRSPRVKTTPLRRPTDMSPLTSNSEEDSNDMGSEKHKGKPAKQPRRKNDKRNPSDSAADGPNPDNLSESKKPYVLDQSSDSDEMPAVLKEAGMMSRSSSDIDSNSEAPANDQKTSDFQKNQPVKDENGKRKRKSSSSGSDLDAKRGKSAKNAAAAKKKRQNYSDSSNYDSELEKEIKMLSKIEAAKKPKKKYSRKEDSYDSSEEEQRKKVSSKRKVNRKKKKGKSSEDDDDVEKSSPEKELNHSSKDKKVGKRSSAKEKINRDSKEKSTKGKHDEYSDAEKSSLEKEESSPEGNKNKDLKKKKAQEDSSSESTEKSAKKEHKFESSKDRLKNKKGSENKVKKSEKLKKKSFKKEEDDSSSDGEKSSPEKGSCNSSENDKIKKEPVFTEKRNLRERVPKRVHIDLSSDTEKSPQKEESSSDDAMQRKKRTETKEKKKTSHKKKISKKEQNDSSSSDEESYEDSKKKTKRGSMKESKRSSLKKKVSKKKVVVTSSSSSDKEENDEQNSSGDGSSDEQKIRPVTESLMLSAGAGFCQSSGDEGEALSRTVPMEEEEDDDDDDPENRIAKKMLLEEIKANLSSDEDSSSDEEPEEGKKKPAKQPENTGDDGENEKEENKSVKEESNSESDSEEEESSKKPRYRHRLLRHKLTMSDGESGEDKKVVKRKDKKEGGKRRNRRKVSSDDSNDSEFHESAVSEEVSESEDDQRPRTRSAKKAEAEENQRSYKQKKKRRRIRVQEDSSSENDNKSNSENEDNDDSKSPGKGRKKIRKIIKDDKLRTETQNALKEEEERRKRIAERERERDKLREVIEIEDASPLKCPITTKLVLDEDEETKEPLVQVHRSIVTRLKPHQVDGVQFMWDCCCESVKKTKTSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFRTALVVCPLNTALNWLNEFEKWQEGLEDEERLEVCELATVKRPQERSYMLQHWQDEGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTLADVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKYEYVLEVRMTPIQCKLYQYYLDHLTGVGGGNEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDDFIASDSEETSMSLSSDDYAKKKKSKGKKVKKECSSSGSGSDNDVEVIKVWNSRSRGGGEGNAEDLSNNPSSTKSDEGKATSSSNPGSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEELGDKVLVFSQSLISLDLIEDFLELANREK…
SIO_010081: ATRX
subclass of: SO_0000673
so part of: ATRX
location: complement(join(1484590..1484649,1485016..1485138,1485778..1485927,1492998..1493192,1494537..1494714,1495771..1495879,1497849..1497952,1498240..1498393,1499317..1499486,1499650..1499738,1500032..1500162,1502988..1503105,1505002..1505177,1505408..1505545,1510291..1510468,1510664..1510810,1515142..1515251,1515637..1515778,1516173..1516352,1516952..1517060,1517529..1517622,1519193..1519405,1519924..1520054,1525973..1526051,1529669..1532571,1533459..1533526,1535644..1535753,1539178..1539297,1543363..1543487,1545034..1545086,1546481..1546536,1549375..1549487,1559996..1560015))
location: region:1484590-1560015:-1
so has part: feature:1559996-1560015:-1:exon
so has part: feature:1549375-1549487:-1:exon
so has part: feature:1546481-1546536:-1:exon
so has part: feature:1545034-1545086:-1:exon
so has part: feature:1543363-1543487:-1:exon
so has part: feature:1539178-1539297:-1:exon
so has part: feature:1535644-1535753:-1:exon
so has part: feature:1533459-1533526:-1:exon
so has part: feature:1529669-1532571:-1:exon
so has part: feature:1525973-1526051:-1:exon
so has part: feature:1519924-1520054:-1:exon
so has part: feature:1519193-1519405:-1:exon
so has part: feature:1517529-1517622:-1:exon
so has part: feature:1516952-1517060:-1:exon
so has part: feature:1516173-1516352:-1:exon
so has part: feature:1515637-1515778:-1:exon
so has part: feature:1515142-1515251:-1:exon
so has part: feature:1510664-1510810:-1:exon
so has part: feature:1510291-1510468:-1:exon
so has part: feature:1505408-1505545:-1:exon
so has part: feature:1505002-1505177:-1:exon
so has part: feature:1502988-1503105:-1:exon
so has part: feature:1500032-1500162:-1:exon
so has part: feature:1499650-1499738:-1:exon
so has part: feature:1499317-1499486:-1:exon
so has part: feature:1498240-1498393:-1:exon
so has part: feature:1497849-1497952:-1:exon
so has part: feature:1495771-1495879:-1:exon
so has part: feature:1494537-1494714:-1:exon
so has part: feature:1492998-1493192:-1:exon
so has part: feature:1485778-1485927:-1:exon
so has part: feature:1485016-1485138:-1:exon
so has part: feature:1484590-1484649:-1:exon

XP_032558146.1
type: Protein
SIO_000068: ncbiprotein

position:1484590:-1
position: 1484590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1559996-1560015:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1549375-1549487:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1546481-1546536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1545034-1545086:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1543363-1543487:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1539178-1539297:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1535644-1535753:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1533459-1533526:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1529669-1532571:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1525973-1526051:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1519924-1520054:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1519193-1519405:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1517529-1517622:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1516952-1517060:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1516173-1516352:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1515637-1515778:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1515142-1515251:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1510664-1510810:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1510291-1510468:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1505408-1505545:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1505002-1505177:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1502988-1503105:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1500032-1500162:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1499650-1499738:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1499317-1499486:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1498240-1498393:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1497849-1497952:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1495771-1495879:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1494537-1494714:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1492998-1493192:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1485778-1485927:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1485016-1485138:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1484590-1484649:-1:exon

MAGT1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: MAGT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1565210..1575303)
location: region:1565210-1575303:-1
so has part: feature:1565210-1575303:-1:exon
subclass of: SO_0000010

116793986
type: Gene
SIO_000068: ncbigene

position:1565210:-1
position: 1565210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1575303:-1
position: 1575303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1565210-1575303:-1:exon

MAGT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: MAGT1
product: magnesium transporter 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 22 long SRA reads, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_032702267.1
SIO_010081: MAGT1
subclass of: SO_0000673
so part of: MAGT1
location: complement(join(1565210..1566692,1567574..1567664,1568127..1568201,1569302..1569365,1570745..1570834,1571161..1571301,1571732..1571872,1572844..1572961,1573822..1573991,1575187..1575303))
location: region:1565210-1575303:-1
so has part: feature:1575187-1575303:-1:exon
so has part: feature:1573822-1573991:-1:exon
so has part: feature:1572844-1572961:-1:exon
so has part: feature:1571732-1571872:-1:exon
so has part: feature:1571161-1571301:-1:exon
so has part: feature:1570745-1570834:-1:exon
so has part: feature:1569302-1569365:-1:exon
so has part: feature:1568127-1568201:-1:exon
so has part: feature:1567574-1567664:-1:exon
so has part: feature:1565210-1566692:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1575187-1575303:-1:exon

position:1575187:-1
position: 1575187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1573822-1573991:-1:exon

position:1573822:-1
position: 1573822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1573991:-1
position: 1573991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1572844-1572961:-1:exon

position:1572844:-1
position: 1572844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1572961:-1
position: 1572961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1571732-1571872:-1:exon

position:1571732:-1
position: 1571732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1571872:-1
position: 1571872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1571161-1571301:-1:exon

position:1571161:-1
position: 1571161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1571301:-1
position: 1571301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1570745-1570834:-1:exon

position:1570745:-1
position: 1570745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1570834:-1
position: 1570834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1569302-1569365:-1:exon

position:1569302:-1
position: 1569302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1569365:-1
position: 1569365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1568127-1568201:-1:exon

position:1568127:-1
position: 1568127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1568201:-1
position: 1568201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1567574-1567664:-1:exon

position:1567574:-1
position: 1567574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1567664:-1
position: 1567664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1565210-1566692:-1:exon

position:1566692:-1
position: 1566692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MAGT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: MAGT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: magnesium transporter protein 1
translation: MAALPVPVPVLAMAALLLLGCRGPGAAGQRRKEMVLSEKVNQLMEWASKRSVIRMNGDKFRRLVKAPPRNYSVIVMFTALQPHRQCVVCKQADEEYQILANSWRYSSAFTNKIFFAMVDFDEGSDVFQMLNMNSAPTFINFPAKGKPKRGDTYELQVRGFAAEQLARWVADRTDVHIRVIRPPNYAGPLMLGLLLAVIGGLVYLRGSNLDFLYNKTGWAFAALCFVLAMTSGQMWNHIRGPPYAHKNPHTGQVNYIHGSSQAQFVAETHIVLLFNGGVTLGMVLLHEAATSDMDVGKRKIMCIAGIGLVVLFFSWLLSVFRSKYHGYPYSFLMS
SIO_010081: MAGT1
subclass of: SO_0000673
so part of: MAGT1
location: complement(join(1566677..1566692,1567574..1567664,1568127..1568201,1569302..1569365,1570745..1570834,1571161..1571301,1571732..1571872,1572844..1572961,1573822..1573991,1575187..1575285))
location: region:1566677-1575285:-1
so has part: feature:1575187-1575285:-1:exon
so has part: feature:1573822-1573991:-1:exon
so has part: feature:1572844-1572961:-1:exon
so has part: feature:1571732-1571872:-1:exon
so has part: feature:1571161-1571301:-1:exon
so has part: feature:1570745-1570834:-1:exon
so has part: feature:1569302-1569365:-1:exon
so has part: feature:1568127-1568201:-1:exon
so has part: feature:1567574-1567664:-1:exon
so has part: feature:1566677-1566692:-1:exon

XP_032558158.1
type: Protein
SIO_000068: ncbiprotein

position:1566677:-1
position: 1566677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1575285:-1
position: 1575285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1575187-1575285:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1573822-1573991:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1572844-1572961:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1571732-1571872:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1571161-1571301:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1570745-1570834:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1569302-1569365:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1568127-1568201:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1567574-1567664:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1566677-1566692:-1:exon

TRNAL-CAA
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: TRNAL-CAA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1577214..1577330)
location: region:1577214-1577330:-1
so has part: feature:1577214-1577330:-1:exon
subclass of: SO_0000663

116794139
type: Gene
SIO_000068: ncbigene

position:1577214:-1
position: 1577214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1577330:-1
position: 1577330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1577214-1577330:-1:exon

TRNAL-CAA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 296741
gene: TRNAL-CAA
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon CAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1577294..1577296),aa:Leu, seq:caa)
SIO_010081: TRNAL-CAA
subclass of: SO_0000673
so part of: TRNAL-CAA
location: complement(join(1577214..1577259,1577293..1577330))
location: region:1577214-1577330:-1
so has part: feature:1577293-1577330:-1:exon
so has part: feature:1577214-1577259:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1577293-1577330:-1:exon

position:1577293:-1
position: 1577293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1577214-1577259:-1:exon

position:1577259:-1
position: 1577259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116793989
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793989
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1577257..1579840
location: region:1577257-1579840:1
so has part: feature:1577257-1579840:1:exon
subclass of: SO_0000010

116793989
type: Gene
SIO_000068: ncbigene

position:1577257:1
position: 1577257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1579840:1
position: 1579840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1577257-1579840:1:exon

LOC116793989
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116793989
product: cytochrome c oxidase subunit 7B, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 mRNAs, 4 ESTs, 4 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_032702271.1
SIO_010081: LOC116793989
subclass of: SO_0000673
so part of: LOC116793989
location: join(1577257..1577635,1578959..1579083,1579641..1579840)
location: region:1577257-1579840:1
so has part: feature:1577257-1577635:1:exon
so has part: feature:1578959-1579083:1:exon
so has part: feature:1579641-1579840:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1577257-1577635:1:exon

position:1577635:1
position: 1577635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1578959-1579083:1:exon

position:1578959:1
position: 1578959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1579083:1
position: 1579083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1579641-1579840:1:exon

position:1579641:1
position: 1579641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116793989
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116793989
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome c oxidase subunit 7B, mitochondrial
translation: MFPVARAALNLAARGIQHTAVRQAHRKHEPNFHDRYGNLVLLGGAAVFVSVWGYVLTQLGMEWGLSPVGRITPREWRE
SIO_010081: LOC116793989
subclass of: SO_0000673
so part of: LOC116793989
location: join(1577599..1577635,1578959..1579083,1579641..1579715)
location: region:1577599-1579715:1
so has part: feature:1577599-1577635:1:exon
so has part: feature:1578959-1579083:1:exon
so has part: feature:1579641-1579715:1:exon

XP_032558162.1
type: Protein
SIO_000068: ncbiprotein

position:1577599:1
position: 1577599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1579715:1
position: 1579715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1577599-1577635:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1578959-1579083:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1579641-1579715:1:exon

ATP7A
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: ATP7A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1580903..1609604
location: region:1580903-1609604:1
so has part: feature:1580903-1609604:1:exon
subclass of: SO_0000010

116793983
type: Gene
SIO_000068: ncbigene

position:1580903:1
position: 1580903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1609604:1
position: 1609604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1580903-1609604:1:exon

ATP7A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ATP7A
product: ATPase copper transporting alpha, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 long SRA read, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032702257.1
SIO_010081: ATP7A
subclass of: SO_0000673
so part of: ATP7A
location: join(1580903..1580976,1587085..1587228,1590153..1590642,1591379..1592110,1593451..1593657,1594658..1594821,1595452..1595613,1596223..1596299,1596472..1596697,1597120..1597353,1597636..1597727,1598137..1598264,1598415..1598569,1598836..1598970,1600445..1600639,1601912..1602094,1602392..1602605,1603260..1603406,1603870..1604012,1604302..1604505,1605091..1605208,1605731..1605833,1606188..1609604)
location: region:1580903-1609604:1
so has part: feature:1580903-1580976:1:exon
so has part: feature:1587085-1587228:1:exon
so has part: feature:1590153-1590642:1:exon
so has part: feature:1591379-1592110:1:exon
so has part: feature:1593451-1593657:1:exon
so has part: feature:1594658-1594821:1:exon
so has part: feature:1595452-1595613:1:exon
so has part: feature:1596223-1596299:1:exon
so has part: feature:1596472-1596697:1:exon
so has part: feature:1597120-1597353:1:exon
so has part: feature:1597636-1597727:1:exon
so has part: feature:1598137-1598264:1:exon
so has part: feature:1598415-1598569:1:exon
so has part: feature:1598836-1598970:1:exon
so has part: feature:1600445-1600639:1:exon
so has part: feature:1601912-1602094:1:exon
so has part: feature:1602392-1602605:1:exon
so has part: feature:1603260-1603406:1:exon
so has part: feature:1603870-1604012:1:exon
so has part: feature:1604302-1604505:1:exon
so has part: feature:1605091-1605208:1:exon
so has part: feature:1605731-1605833:1:exon
so has part: feature:1606188-1609604:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1580903-1580976:1:exon

position:1580976:1
position: 1580976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1587085-1587228:1:exon

position:1587085:1
position: 1587085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1587228:1
position: 1587228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1590153-1590642:1:exon

position:1590153:1
position: 1590153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1590642:1
position: 1590642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1591379-1592110:1:exon

position:1591379:1
position: 1591379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1592110:1
position: 1592110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1593451-1593657:1:exon

position:1593451:1
position: 1593451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1593657:1
position: 1593657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1594658-1594821:1:exon

position:1594658:1
position: 1594658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1594821:1
position: 1594821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1595452-1595613:1:exon

position:1595452:1
position: 1595452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1595613:1
position: 1595613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1596223-1596299:1:exon

position:1596223:1
position: 1596223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1596299:1
position: 1596299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1596472-1596697:1:exon

position:1596472:1
position: 1596472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1596697:1
position: 1596697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1597120-1597353:1:exon

position:1597120:1
position: 1597120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1597353:1
position: 1597353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1597636-1597727:1:exon

position:1597636:1
position: 1597636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1597727:1
position: 1597727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1598137-1598264:1:exon

position:1598137:1
position: 1598137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1598264:1
position: 1598264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1598415-1598569:1:exon

position:1598415:1
position: 1598415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1598569:1
position: 1598569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1598836-1598970:1:exon

position:1598836:1
position: 1598836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1598970:1
position: 1598970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1600445-1600639:1:exon

position:1600445:1
position: 1600445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1600639:1
position: 1600639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1601912-1602094:1:exon

position:1601912:1
position: 1601912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1602094:1
position: 1602094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1602392-1602605:1:exon

position:1602392:1
position: 1602392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1602605:1
position: 1602605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1603260-1603406:1:exon

position:1603260:1
position: 1603260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1603406:1
position: 1603406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1603870-1604012:1:exon

position:1603870:1
position: 1603870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1604012:1
position: 1604012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1604302-1604505:1:exon

position:1604302:1
position: 1604302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1604505:1
position: 1604505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1605091-1605208:1:exon

position:1605091:1
position: 1605091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1605208:1
position: 1605208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1605731-1605833:1:exon

position:1605731:1
position: 1605731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1605833:1
position: 1605833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1606188-1609604:1:exon

position:1606188:1
position: 1606188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATP7A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ATP7A
product: ATPase copper transporting alpha, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 long SRA read, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032702260.1
SIO_010081: ATP7A
subclass of: SO_0000673
so part of: ATP7A
location: join(1580904..1581005,1587085..1587228,1590153..1590642,1591379..1592110,1593451..1593657,1594658..1594821,1595452..1595613,1596223..1596299,1596472..1596697,1597120..1597353,1597636..1597727,1598137..1598264,1598415..1598569,1598836..1598970,1600445..1600639,1601912..1602094,1602392..1602605,1603260..1603406,1603870..1604012,1604302..1604505,1605091..1605208,1605731..1605833,1606188..1609604)
location: region:1580904-1609604:1
so has part: feature:1580904-1581005:1:exon
so has part: feature:1587085-1587228:1:exon
so has part: feature:1590153-1590642:1:exon
so has part: feature:1591379-1592110:1:exon
so has part: feature:1593451-1593657:1:exon
so has part: feature:1594658-1594821:1:exon
so has part: feature:1595452-1595613:1:exon
so has part: feature:1596223-1596299:1:exon
so has part: feature:1596472-1596697:1:exon
so has part: feature:1597120-1597353:1:exon
so has part: feature:1597636-1597727:1:exon
so has part: feature:1598137-1598264:1:exon
so has part: feature:1598415-1598569:1:exon
so has part: feature:1598836-1598970:1:exon
so has part: feature:1600445-1600639:1:exon
so has part: feature:1601912-1602094:1:exon
so has part: feature:1602392-1602605:1:exon
so has part: feature:1603260-1603406:1:exon
so has part: feature:1603870-1604012:1:exon
so has part: feature:1604302-1604505:1:exon
so has part: feature:1605091-1605208:1:exon
so has part: feature:1605731-1605833:1:exon
so has part: feature:1606188-1609604:1:exon

position:1580904:1
position: 1580904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1580904-1581005:1:exon

position:1581005:1
position: 1581005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1587085-1587228:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1590153-1590642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1591379-1592110:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1593451-1593657:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1594658-1594821:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1595452-1595613:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1596223-1596299:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1596472-1596697:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1597120-1597353:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1597636-1597727:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1598137-1598264:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1598415-1598569:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1598836-1598970:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1600445-1600639:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1601912-1602094:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1602392-1602605:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1603260-1603406:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1603870-1604012:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1604302-1604505:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1605091-1605208:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1605731-1605833:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1606188-1609604:1:exon

ATP7A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ATP7A
product: ATPase copper transporting alpha, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 long SRA read, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032702258.1
SIO_010081: ATP7A
subclass of: SO_0000673
so part of: ATP7A
location: join(1580910..1581034,1587085..1587228,1590153..1590642,1591379..1592110,1593451..1593657,1594658..1594821,1595452..1595613,1596223..1596299,1596472..1596697,1597120..1597353,1597636..1597727,1598137..1598264,1598415..1598569,1598836..1598970,1600445..1600639,1601912..1602094,1602392..1602605,1603260..1603406,1603870..1604012,1604302..1604505,1605091..1605208,1605731..1605833,1606188..1609604)
location: region:1580910-1609604:1
so has part: feature:1580910-1581034:1:exon
so has part: feature:1587085-1587228:1:exon
so has part: feature:1590153-1590642:1:exon
so has part: feature:1591379-1592110:1:exon
so has part: feature:1593451-1593657:1:exon
so has part: feature:1594658-1594821:1:exon
so has part: feature:1595452-1595613:1:exon
so has part: feature:1596223-1596299:1:exon
so has part: feature:1596472-1596697:1:exon
so has part: feature:1597120-1597353:1:exon
so has part: feature:1597636-1597727:1:exon
so has part: feature:1598137-1598264:1:exon
so has part: feature:1598415-1598569:1:exon
so has part: feature:1598836-1598970:1:exon
so has part: feature:1600445-1600639:1:exon
so has part: feature:1601912-1602094:1:exon
so has part: feature:1602392-1602605:1:exon
so has part: feature:1603260-1603406:1:exon
so has part: feature:1603870-1604012:1:exon
so has part: feature:1604302-1604505:1:exon
so has part: feature:1605091-1605208:1:exon
so has part: feature:1605731-1605833:1:exon
so has part: feature:1606188-1609604:1:exon

position:1580910:1
position: 1580910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1580910-1581034:1:exon

position:1581034:1
position: 1581034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1587085-1587228:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1590153-1590642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1591379-1592110:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1593451-1593657:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1594658-1594821:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1595452-1595613:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1596223-1596299:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1596472-1596697:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1597120-1597353:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1597636-1597727:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1598137-1598264:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1598415-1598569:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1598836-1598970:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1600445-1600639:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1601912-1602094:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1602392-1602605:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1603260-1603406:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1603870-1604012:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1604302-1604505:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1605091-1605208:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1605731-1605833:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1606188-1609604:1:exon

ATP7A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ATP7A
product: ATPase copper transporting alpha, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 long SRA read, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032702263.1
SIO_010081: ATP7A
subclass of: SO_0000673
so part of: ATP7A
location: join(1580958..1580976,1587092..1587228,1590153..1590642,1591379..1592110,1593451..1593657,1594658..1594821,1595452..1595613,1596223..1596299,1596472..1596697,1597120..1597353,1597636..1597727,1598137..1598264,1598415..1598569,1598836..1598970,1600445..1600639,1601912..1602094,1602392..1602605,1603260..1603406,1603870..1604012,1604302..1604505,1605091..1605208,1605731..1605833,1606188..1609604)
location: region:1580958-1609604:1
so has part: feature:1580958-1580976:1:exon
so has part: feature:1587092-1587228:1:exon
so has part: feature:1590153-1590642:1:exon
so has part: feature:1591379-1592110:1:exon
so has part: feature:1593451-1593657:1:exon
so has part: feature:1594658-1594821:1:exon
so has part: feature:1595452-1595613:1:exon
so has part: feature:1596223-1596299:1:exon
so has part: feature:1596472-1596697:1:exon
so has part: feature:1597120-1597353:1:exon
so has part: feature:1597636-1597727:1:exon
so has part: feature:1598137-1598264:1:exon
so has part: feature:1598415-1598569:1:exon
so has part: feature:1598836-1598970:1:exon
so has part: feature:1600445-1600639:1:exon
so has part: feature:1601912-1602094:1:exon
so has part: feature:1602392-1602605:1:exon
so has part: feature:1603260-1603406:1:exon
so has part: feature:1603870-1604012:1:exon
so has part: feature:1604302-1604505:1:exon
so has part: feature:1605091-1605208:1:exon
so has part: feature:1605731-1605833:1:exon
so has part: feature:1606188-1609604:1:exon

position:1580958:1
position: 1580958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1580958-1580976:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1587092-1587228:1:exon

position:1587092:1
position: 1587092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1590153-1590642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1591379-1592110:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1593451-1593657:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1594658-1594821:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1595452-1595613:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1596223-1596299:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1596472-1596697:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1597120-1597353:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1597636-1597727:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1598137-1598264:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1598415-1598569:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1598836-1598970:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1600445-1600639:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1601912-1602094:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1602392-1602605:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1603260-1603406:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1603870-1604012:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1604302-1604505:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1605091-1605208:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1605731-1605833:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1606188-1609604:1:exon

ATP7A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ATP7A
product: ATPase copper transporting alpha, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 long SRA read, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032702262.1
SIO_010081: ATP7A
subclass of: SO_0000673
so part of: ATP7A
location: join(1581237..1581264,1587085..1587228,1590153..1590642,1591379..1592110,1593451..1593657,1594658..1594821,1595452..1595613,1596223..1596299,1596472..1596697,1597120..1597353,1597636..1597727,1598137..1598264,1598415..1598569,1598836..1598970,1600445..1600639,1601912..1602094,1602392..1602605,1603260..1603406,1603870..1604012,1604302..1604505,1605091..1605208,1605731..1605833,1606188..1609604)
location: region:1581237-1609604:1
so has part: feature:1581237-1581264:1:exon
so has part: feature:1587085-1587228:1:exon
so has part: feature:1590153-1590642:1:exon
so has part: feature:1591379-1592110:1:exon
so has part: feature:1593451-1593657:1:exon
so has part: feature:1594658-1594821:1:exon
so has part: feature:1595452-1595613:1:exon
so has part: feature:1596223-1596299:1:exon
so has part: feature:1596472-1596697:1:exon
so has part: feature:1597120-1597353:1:exon
so has part: feature:1597636-1597727:1:exon
so has part: feature:1598137-1598264:1:exon
so has part: feature:1598415-1598569:1:exon
so has part: feature:1598836-1598970:1:exon
so has part: feature:1600445-1600639:1:exon
so has part: feature:1601912-1602094:1:exon
so has part: feature:1602392-1602605:1:exon
so has part: feature:1603260-1603406:1:exon
so has part: feature:1603870-1604012:1:exon
so has part: feature:1604302-1604505:1:exon
so has part: feature:1605091-1605208:1:exon
so has part: feature:1605731-1605833:1:exon
so has part: feature:1606188-1609604:1:exon

position:1581237:1
position: 1581237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1581237-1581264:1:exon

position:1581264:1
position: 1581264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1587085-1587228:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1590153-1590642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1591379-1592110:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1593451-1593657:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1594658-1594821:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1595452-1595613:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1596223-1596299:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1596472-1596697:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1597120-1597353:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1597636-1597727:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1598137-1598264:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1598415-1598569:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1598836-1598970:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1600445-1600639:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1601912-1602094:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1602392-1602605:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1603260-1603406:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1603870-1604012:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1604302-1604505:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1605091-1605208:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1605731-1605833:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1606188-1609604:1:exon

ATP7A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ATP7A
product: ATPase copper transporting alpha, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 long SRA read, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032702264.1
SIO_010081: ATP7A
subclass of: SO_0000673
so part of: ATP7A
location: join(1581250..1581264,1587092..1587228,1590153..1590642,1591379..1592110,1593451..1593657,1594658..1594821,1595452..1595613,1596223..1596299,1596472..1596697,1597120..1597353,1597636..1597727,1598137..1598264,1598415..1598569,1598836..1598970,1600445..1600639,1601912..1602094,1602392..1602605,1603260..1603406,1603870..1604012,1604302..1604505,1605091..1605208,1605731..1605833,1606188..1609604)
location: region:1581250-1609604:1
so has part: feature:1581250-1581264:1:exon
so has part: feature:1587092-1587228:1:exon
so has part: feature:1590153-1590642:1:exon
so has part: feature:1591379-1592110:1:exon
so has part: feature:1593451-1593657:1:exon
so has part: feature:1594658-1594821:1:exon
so has part: feature:1595452-1595613:1:exon
so has part: feature:1596223-1596299:1:exon
so has part: feature:1596472-1596697:1:exon
so has part: feature:1597120-1597353:1:exon
so has part: feature:1597636-1597727:1:exon
so has part: feature:1598137-1598264:1:exon
so has part: feature:1598415-1598569:1:exon
so has part: feature:1598836-1598970:1:exon
so has part: feature:1600445-1600639:1:exon
so has part: feature:1601912-1602094:1:exon
so has part: feature:1602392-1602605:1:exon
so has part: feature:1603260-1603406:1:exon
so has part: feature:1603870-1604012:1:exon
so has part: feature:1604302-1604505:1:exon
so has part: feature:1605091-1605208:1:exon
so has part: feature:1605731-1605833:1:exon
so has part: feature:1606188-1609604:1:exon

position:1581250:1
position: 1581250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1581250-1581264:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1587092-1587228:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1590153-1590642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1591379-1592110:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1593451-1593657:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1594658-1594821:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1595452-1595613:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1596223-1596299:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1596472-1596697:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1597120-1597353:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1597636-1597727:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1598137-1598264:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1598415-1598569:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1598836-1598970:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1600445-1600639:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1601912-1602094:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1602392-1602605:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1603260-1603406:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1603870-1604012:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1604302-1604505:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1605091-1605208:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1605731-1605833:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1606188-1609604:1:exon

ATP7A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ATP7A
product: ATPase copper transporting alpha, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 long SRA read, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032702261.1
SIO_010081: ATP7A
subclass of: SO_0000673
so part of: ATP7A
location: join(1584482..1584533,1587085..1587228,1590153..1590642,1591379..1592110,1593451..1593657,1594658..1594821,1595452..1595613,1596223..1596299,1596472..1596697,1597120..1597353,1597636..1597727,1598137..1598264,1598415..1598569,1598836..1598970,1600445..1600639,1601912..1602094,1602392..1602605,1603260..1603406,1603870..1604012,1604302..1604505,1605091..1605208,1605731..1605833,1606188..1609604)
location: region:1584482-1609604:1
so has part: feature:1584482-1584533:1:exon
so has part: feature:1587085-1587228:1:exon
so has part: feature:1590153-1590642:1:exon
so has part: feature:1591379-1592110:1:exon
so has part: feature:1593451-1593657:1:exon
so has part: feature:1594658-1594821:1:exon
so has part: feature:1595452-1595613:1:exon
so has part: feature:1596223-1596299:1:exon
so has part: feature:1596472-1596697:1:exon
so has part: feature:1597120-1597353:1:exon
so has part: feature:1597636-1597727:1:exon
so has part: feature:1598137-1598264:1:exon
so has part: feature:1598415-1598569:1:exon
so has part: feature:1598836-1598970:1:exon
so has part: feature:1600445-1600639:1:exon
so has part: feature:1601912-1602094:1:exon
so has part: feature:1602392-1602605:1:exon
so has part: feature:1603260-1603406:1:exon
so has part: feature:1603870-1604012:1:exon
so has part: feature:1604302-1604505:1:exon
so has part: feature:1605091-1605208:1:exon
so has part: feature:1605731-1605833:1:exon
so has part: feature:1606188-1609604:1:exon

position:1584482:1
position: 1584482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1584482-1584533:1:exon

position:1584533:1
position: 1584533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1587085-1587228:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1590153-1590642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1591379-1592110:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1593451-1593657:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1594658-1594821:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1595452-1595613:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1596223-1596299:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1596472-1596697:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1597120-1597353:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1597636-1597727:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1598137-1598264:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1598415-1598569:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1598836-1598970:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1600445-1600639:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1601912-1602094:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1602392-1602605:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1603260-1603406:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1603870-1604012:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1604302-1604505:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1605091-1605208:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1605731-1605833:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1606188-1609604:1:exon

ATP7A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ATP7A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: copper-transporting ATPase 1
translation: MEAKSVVIGVEGMTCNSCVQTIEQHVGKMNGIHNIKVSLEDKNAVVIYDSRLQTPGTLQEAIYDMGFDATLADSHPQPVIPDTIFLTIPPQSALTPRQICTTLLKNKGILDVKVSSDQKTAVVTFISSIINGKQIIQVVPGVDLNISAAEVTPGSWEDPVWSQASSAVLRLKVDGMTCHSCTSTIEGRLGKLQGIQRVRVSLDNQEAVVIYQPHLITAEEIKHQIEAAGFAASFKKQPRALKLSAIDLERLRSAQPKGSEPAQRENSSGTGSRTVVFRVDGMHCNSCVLNIQGTVSALPAVTGVVVSLEKKSAVISYNPNLISIDRLRKAIEAVSPETFKVSLPEEYENLALLPPLASPLKSHAALKDPSQPLTQVVVINIEGMTCSSCVQSIEGVISQKPGVKSIHVSLSNGNGTIEYDPLQTSPEDLRSSIEDMGFDASFPAKAELPVAKAQPSPEAQLDSHKPEPSSKVPPAHLGRQEAKTISKCYVQVTGMTCASCVANIERNLRREDGIHSILVALMAGKAEVRYNPAVIHPSAIAELIRELGFGATVMENCGEGDGILELVVRGMTCASCVHKIESTLMKTNGVLYCSVALATNKAHIKYDPEAVGPRDVIQVIKDLGFTTSLVKKDRSASHLDHKQEIRQWKRSFVVSFVFCIPVMGLMIYMMVMNSHPSGAHTHHNMSSQEREASHSSMVLDYQLLPGLSVMNFLSFLLCVPVQVFGGWHFYIQAYRALKHSTANMDVLVVLATSIAFLYSFVILLVAMAEKAKVNPVTFFDTPPMLFVFISLGRWLEHVAKGKTSEALARLISLQATEATIVTLGPDNVLLSEEQVDVELVQRGDIVKVVPGGKFPVDGRVIEGHSMVDESLITGEAMPVTKKPGNTVIAGSINQNGSLLIAATHVGADTTLSQIVKLVEEAQTSKAPIQQFADKLSGYFVPFIVAVSVVTLLAWIIIGFVDFGIVEKYFLGYSESLSSAEVIVRFAFQASITVLCIACPCSLGLATPTAVMVGTGVGAQNGILIKGGEPLEMAHKVKVVVFDKTGTITHGTPEVMQVKFLVEGNQLPCHKLLAIVGTAESNSEHPLGAAITKYCKKELDLETLGTCTDFQVVPGCGISCKVSNIEALLYRKNRMVEENNIKNATLVKIEENTDESVQPALIIDAELPTTMTSQKYSVLIGNREWMTRNGLLVRSEVDKAMMEHERRGRTAVLAAVDGVLCGLIAIADTVKPEAELAVYTLKSMGLEVVLMTGDNSKTARSIASQVGITKVFAEVLPSHKVAKVKQLQDEGKRVAMVGDGINDSPALAMANVGIAIGTGTDVAIEAADVVLIRDDLMDVVASIDLSRKTVKRIRINFVFALIYNLIGVPIAAGVFLPIGLVLQPWMGSAAMAASSVSVVLSSLLLKMYQKPRSEKLEYRARGQMRHKSPSEISVHVGIDEAGPGSPKLSLMDRILHYSRASINSLFSDKRSVNSIVLNEPDKHSLLVGDFGEDDDTAL
SIO_010081: ATP7A
subclass of: SO_0000673
so part of: ATP7A
location: join(1587121..1587228,1590153..1590642,1591379..1592110,1593451..1593657,1594658..1594821,1595452..1595613,1596223..1596299,1596472..1596697,1597120..1597353,1597636..1597727,1598137..1598264,1598415..1598569,1598836..1598970,1600445..1600639,1601912..1602094,1602392..1602605,1603260..1603406,1603870..1604012,1604302..1604505,1605091..1605208,1605731..1605833,1606188..1606464)
location: region:1587121-1606464:1
so has part: feature:1587121-1587228:1:exon
so has part: feature:1590153-1590642:1:exon
so has part: feature:1591379-1592110:1:exon
so has part: feature:1593451-1593657:1:exon
so has part: feature:1594658-1594821:1:exon
so has part: feature:1595452-1595613:1:exon
so has part: feature:1596223-1596299:1:exon
so has part: feature:1596472-1596697:1:exon
so has part: feature:1597120-1597353:1:exon
so has part: feature:1597636-1597727:1:exon
so has part: feature:1598137-1598264:1:exon
so has part: feature:1598415-1598569:1:exon
so has part: feature:1598836-1598970:1:exon
so has part: feature:1600445-1600639:1:exon
so has part: feature:1601912-1602094:1:exon
so has part: feature:1602392-1602605:1:exon
so has part: feature:1603260-1603406:1:exon
so has part: feature:1603870-1604012:1:exon
so has part: feature:1604302-1604505:1:exon
so has part: feature:1605091-1605208:1:exon
so has part: feature:1605731-1605833:1:exon
so has part: feature:1606188-1606464:1:exon

XP_032558148.1
type: Protein
SIO_000068: ncbiprotein

position:1587121:1
position: 1587121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1606464:1
position: 1606464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1587121-1587228:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1590153-1590642:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1591379-1592110:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1593451-1593657:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1594658-1594821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1595452-1595613:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1596223-1596299:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1596472-1596697:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1597120-1597353:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1597636-1597727:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1598137-1598264:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1598415-1598569:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1598836-1598970:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1600445-1600639:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1601912-1602094:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1602392-1602605:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1603260-1603406:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1603870-1604012:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1604302-1604505:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1605091-1605208:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1605731-1605833:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1606188-1606464:1:exon

ATP7A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ATP7A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: copper-transporting ATPase 1
translation: MEAKSVVIGVEGMTCNSCVQTIEQHVGKMNGIHNIKVSLEDKNAVVIYDSRLQTPGTLQEAIYDMGFDATLADSHPQPVIPDTIFLTIPPQSALTPRQICTTLLKNKGILDVKVSSDQKTAVVTFISSIINGKQIIQVVPGVDLNISAAEVTPGSWEDPVWSQASSAVLRLKVDGMTCHSCTSTIEGRLGKLQGIQRVRVSLDNQEAVVIYQPHLITAEEIKHQIEAAGFAASFKKQPRALKLSAIDLERLRSAQPKGSEPAQRENSSGTGSRTVVFRVDGMHCNSCVLNIQGTVSALPAVTGVVVSLEKKSAVISYNPNLISIDRLRKAIEAVSPETFKVSLPEEYENLALLPPLASPLKSHAALKDPSQPLTQVVVINIEGMTCSSCVQSIEGVISQKPGVKSIHVSLSNGNGTIEYDPLQTSPEDLRSSIEDMGFDASFPAKAELPVAKAQPSPEAQLDSHKPEPSSKVPPAHLGRQEAKTISKCYVQVTGMTCASCVANIERNLRREDGIHSILVALMAGKAEVRYNPAVIHPSAIAELIRELGFGATVMENCGEGDGILELVVRGMTCASCVHKIESTLMKTNGVLYCSVALATNKAHIKYDPEAVGPRDVIQVIKDLGFTTSLVKKDRSASHLDHKQEIRQWKRSFVVSFVFCIPVMGLMIYMMVMNSHPSGAHTHHNMSSQEREASHSSMVLDYQLLPGLSVMNFLSFLLCVPVQVFGGWHFYIQAYRALKHSTANMDVLVVLATSIAFLYSFVILLVAMAEKAKVNPVTFFDTPPMLFVFISLGRWLEHVAKGKTSEALARLISLQATEATIVTLGPDNVLLSEEQVDVELVQRGDIVKVVPGGKFPVDGRVIEGHSMVDESLITGEAMPVTKKPGNTVIAGSINQNGSLLIAATHVGADTTLSQIVKLVEEAQTSKAPIQQFADKLSGYFVPFIVAVSVVTLLAWIIIGFVDFGIVEKYFLGYSESLSSAEVIVRFAFQASITVLCIACPCSLGLATPTAVMVGTGVGAQNGILIKGGEPLEMAHKVKVVVFDKTGTITHGTPEVMQVKFLVEGNQLPCHKLLAIVGTAESNSEHPLGAAITKYCKKELDLETLGTCTDFQVVPGCGISCKVSNIEALLYRKNRMVEENNIKNATLVKIEENTDESVQPALIIDAELPTTMTSQKYSVLIGNREWMTRNGLLVRSEVDKAMMEHERRGRTAVLAAVDGVLCGLIAIADTVKPEAELAVYTLKSMGLEVVLMTGDNSKTARSIASQVGITKVFAEVLPSHKVAKVKQLQDEGKRVAMVGDGINDSPALAMANVGIAIGTGTDVAIEAADVVLIRDDLMDVVASIDLSRKTVKRIRINFVFALIYNLIGVPIAAGVFLPIGLVLQPWMGSAAMAASSVSVVLSSLLLKMYQKPRSEKLEYRARGQMRHKSPSEISVHVGIDEAGPGSPKLSLMDRILHYSRASINSLFSDKRSVNSIVLNEPDKHSLLVGDFGEDDDTAL
SIO_010081: ATP7A
subclass of: SO_0000673
so part of: ATP7A
location: join(1587121..1587228,1590153..1590642,1591379..1592110,1593451..1593657,1594658..1594821,1595452..1595613,1596223..1596299,1596472..1596697,1597120..1597353,1597636..1597727,1598137..1598264,1598415..1598569,1598836..1598970,1600445..1600639,1601912..1602094,1602392..1602605,1603260..1603406,1603870..1604012,1604302..1604505,1605091..1605208,1605731..1605833,1606188..1606464)
location: region:1587121-1606464:1
so has part: feature:1587121-1587228:1:exon
so has part: feature:1590153-1590642:1:exon
so has part: feature:1591379-1592110:1:exon
so has part: feature:1593451-1593657:1:exon
so has part: feature:1594658-1594821:1:exon
so has part: feature:1595452-1595613:1:exon
so has part: feature:1596223-1596299:1:exon
so has part: feature:1596472-1596697:1:exon
so has part: feature:1597120-1597353:1:exon
so has part: feature:1597636-1597727:1:exon
so has part: feature:1598137-1598264:1:exon
so has part: feature:1598415-1598569:1:exon
so has part: feature:1598836-1598970:1:exon
so has part: feature:1600445-1600639:1:exon
so has part: feature:1601912-1602094:1:exon
so has part: feature:1602392-1602605:1:exon
so has part: feature:1603260-1603406:1:exon
so has part: feature:1603870-1604012:1:exon
so has part: feature:1604302-1604505:1:exon
so has part: feature:1605091-1605208:1:exon
so has part: feature:1605731-1605833:1:exon
so has part: feature:1606188-1606464:1:exon

XP_032558149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1587121-1587228:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1590153-1590642:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1591379-1592110:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1593451-1593657:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1594658-1594821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1595452-1595613:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1596223-1596299:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1596472-1596697:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1597120-1597353:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1597636-1597727:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1598137-1598264:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1598415-1598569:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1598836-1598970:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1600445-1600639:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1601912-1602094:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1602392-1602605:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1603260-1603406:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1603870-1604012:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1604302-1604505:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1605091-1605208:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1605731-1605833:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1606188-1606464:1:exon

ATP7A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ATP7A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: copper-transporting ATPase 1
translation: MEAKSVVIGVEGMTCNSCVQTIEQHVGKMNGIHNIKVSLEDKNAVVIYDSRLQTPGTLQEAIYDMGFDATLADSHPQPVIPDTIFLTIPPQSALTPRQICTTLLKNKGILDVKVSSDQKTAVVTFISSIINGKQIIQVVPGVDLNISAAEVTPGSWEDPVWSQASSAVLRLKVDGMTCHSCTSTIEGRLGKLQGIQRVRVSLDNQEAVVIYQPHLITAEEIKHQIEAAGFAASFKKQPRALKLSAIDLERLRSAQPKGSEPAQRENSSGTGSRTVVFRVDGMHCNSCVLNIQGTVSALPAVTGVVVSLEKKSAVISYNPNLISIDRLRKAIEAVSPETFKVSLPEEYENLALLPPLASPLKSHAALKDPSQPLTQVVVINIEGMTCSSCVQSIEGVISQKPGVKSIHVSLSNGNGTIEYDPLQTSPEDLRSSIEDMGFDASFPAKAELPVAKAQPSPEAQLDSHKPEPSSKVPPAHLGRQEAKTISKCYVQVTGMTCASCVANIERNLRREDGIHSILVALMAGKAEVRYNPAVIHPSAIAELIRELGFGATVMENCGEGDGILELVVRGMTCASCVHKIESTLMKTNGVLYCSVALATNKAHIKYDPEAVGPRDVIQVIKDLGFTTSLVKKDRSASHLDHKQEIRQWKRSFVVSFVFCIPVMGLMIYMMVMNSHPSGAHTHHNMSSQEREASHSSMVLDYQLLPGLSVMNFLSFLLCVPVQVFGGWHFYIQAYRALKHSTANMDVLVVLATSIAFLYSFVILLVAMAEKAKVNPVTFFDTPPMLFVFISLGRWLEHVAKGKTSEALARLISLQATEATIVTLGPDNVLLSEEQVDVELVQRGDIVKVVPGGKFPVDGRVIEGHSMVDESLITGEAMPVTKKPGNTVIAGSINQNGSLLIAATHVGADTTLSQIVKLVEEAQTSKAPIQQFADKLSGYFVPFIVAVSVVTLLAWIIIGFVDFGIVEKYFLGYSESLSSAEVIVRFAFQASITVLCIACPCSLGLATPTAVMVGTGVGAQNGILIKGGEPLEMAHKVKVVVFDKTGTITHGTPEVMQVKFLVEGNQLPCHKLLAIVGTAESNSEHPLGAAITKYCKKELDLETLGTCTDFQVVPGCGISCKVSNIEALLYRKNRMVEENNIKNATLVKIEENTDESVQPALIIDAELPTTMTSQKYSVLIGNREWMTRNGLLVRSEVDKAMMEHERRGRTAVLAAVDGVLCGLIAIADTVKPEAELAVYTLKSMGLEVVLMTGDNSKTARSIASQVGITKVFAEVLPSHKVAKVKQLQDEGKRVAMVGDGINDSPALAMANVGIAIGTGTDVAIEAADVVLIRDDLMDVVASIDLSRKTVKRIRINFVFALIYNLIGVPIAAGVFLPIGLVLQPWMGSAAMAASSVSVVLSSLLLKMYQKPRSEKLEYRARGQMRHKSPSEISVHVGIDEAGPGSPKLSLMDRILHYSRASINSLFSDKRSVNSIVLNEPDKHSLLVGDFGEDDDTAL
SIO_010081: ATP7A
subclass of: SO_0000673
so part of: ATP7A
location: join(1587121..1587228,1590153..1590642,1591379..1592110,1593451..1593657,1594658..1594821,1595452..1595613,1596223..1596299,1596472..1596697,1597120..1597353,1597636..1597727,1598137..1598264,1598415..1598569,1598836..1598970,1600445..1600639,1601912..1602094,1602392..1602605,1603260..1603406,1603870..1604012,1604302..1604505,1605091..1605208,1605731..1605833,1606188..1606464)
location: region:1587121-1606464:1
so has part: feature:1587121-1587228:1:exon
so has part: feature:1590153-1590642:1:exon
so has part: feature:1591379-1592110:1:exon
so has part: feature:1593451-1593657:1:exon
so has part: feature:1594658-1594821:1:exon
so has part: feature:1595452-1595613:1:exon
so has part: feature:1596223-1596299:1:exon
so has part: feature:1596472-1596697:1:exon
so has part: feature:1597120-1597353:1:exon
so has part: feature:1597636-1597727:1:exon
so has part: feature:1598137-1598264:1:exon
so has part: feature:1598415-1598569:1:exon
so has part: feature:1598836-1598970:1:exon
so has part: feature:1600445-1600639:1:exon
so has part: feature:1601912-1602094:1:exon
so has part: feature:1602392-1602605:1:exon
so has part: feature:1603260-1603406:1:exon
so has part: feature:1603870-1604012:1:exon
so has part: feature:1604302-1604505:1:exon
so has part: feature:1605091-1605208:1:exon
so has part: feature:1605731-1605833:1:exon
so has part: feature:1606188-1606464:1:exon

XP_032558151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1587121-1587228:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1590153-1590642:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1591379-1592110:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1593451-1593657:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1594658-1594821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1595452-1595613:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1596223-1596299:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1596472-1596697:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1597120-1597353:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1597636-1597727:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1598137-1598264:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1598415-1598569:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1598836-1598970:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1600445-1600639:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1601912-1602094:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1602392-1602605:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1603260-1603406:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1603870-1604012:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1604302-1604505:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1605091-1605208:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1605731-1605833:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1606188-1606464:1:exon

ATP7A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ATP7A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: copper-transporting ATPase 1
translation: MEAKSVVIGVEGMTCNSCVQTIEQHVGKMNGIHNIKVSLEDKNAVVIYDSRLQTPGTLQEAIYDMGFDATLADSHPQPVIPDTIFLTIPPQSALTPRQICTTLLKNKGILDVKVSSDQKTAVVTFISSIINGKQIIQVVPGVDLNISAAEVTPGSWEDPVWSQASSAVLRLKVDGMTCHSCTSTIEGRLGKLQGIQRVRVSLDNQEAVVIYQPHLITAEEIKHQIEAAGFAASFKKQPRALKLSAIDLERLRSAQPKGSEPAQRENSSGTGSRTVVFRVDGMHCNSCVLNIQGTVSALPAVTGVVVSLEKKSAVISYNPNLISIDRLRKAIEAVSPETFKVSLPEEYENLALLPPLASPLKSHAALKDPSQPLTQVVVINIEGMTCSSCVQSIEGVISQKPGVKSIHVSLSNGNGTIEYDPLQTSPEDLRSSIEDMGFDASFPAKAELPVAKAQPSPEAQLDSHKPEPSSKVPPAHLGRQEAKTISKCYVQVTGMTCASCVANIERNLRREDGIHSILVALMAGKAEVRYNPAVIHPSAIAELIRELGFGATVMENCGEGDGILELVVRGMTCASCVHKIESTLMKTNGVLYCSVALATNKAHIKYDPEAVGPRDVIQVIKDLGFTTSLVKKDRSASHLDHKQEIRQWKRSFVVSFVFCIPVMGLMIYMMVMNSHPSGAHTHHNMSSQEREASHSSMVLDYQLLPGLSVMNFLSFLLCVPVQVFGGWHFYIQAYRALKHSTANMDVLVVLATSIAFLYSFVILLVAMAEKAKVNPVTFFDTPPMLFVFISLGRWLEHVAKGKTSEALARLISLQATEATIVTLGPDNVLLSEEQVDVELVQRGDIVKVVPGGKFPVDGRVIEGHSMVDESLITGEAMPVTKKPGNTVIAGSINQNGSLLIAATHVGADTTLSQIVKLVEEAQTSKAPIQQFADKLSGYFVPFIVAVSVVTLLAWIIIGFVDFGIVEKYFLGYSESLSSAEVIVRFAFQASITVLCIACPCSLGLATPTAVMVGTGVGAQNGILIKGGEPLEMAHKVKVVVFDKTGTITHGTPEVMQVKFLVEGNQLPCHKLLAIVGTAESNSEHPLGAAITKYCKKELDLETLGTCTDFQVVPGCGISCKVSNIEALLYRKNRMVEENNIKNATLVKIEENTDESVQPALIIDAELPTTMTSQKYSVLIGNREWMTRNGLLVRSEVDKAMMEHERRGRTAVLAAVDGVLCGLIAIADTVKPEAELAVYTLKSMGLEVVLMTGDNSKTARSIASQVGITKVFAEVLPSHKVAKVKQLQDEGKRVAMVGDGINDSPALAMANVGIAIGTGTDVAIEAADVVLIRDDLMDVVASIDLSRKTVKRIRINFVFALIYNLIGVPIAAGVFLPIGLVLQPWMGSAAMAASSVSVVLSSLLLKMYQKPRSEKLEYRARGQMRHKSPSEISVHVGIDEAGPGSPKLSLMDRILHYSRASINSLFSDKRSVNSIVLNEPDKHSLLVGDFGEDDDTAL
SIO_010081: ATP7A
subclass of: SO_0000673
so part of: ATP7A
location: join(1587121..1587228,1590153..1590642,1591379..1592110,1593451..1593657,1594658..1594821,1595452..1595613,1596223..1596299,1596472..1596697,1597120..1597353,1597636..1597727,1598137..1598264,1598415..1598569,1598836..1598970,1600445..1600639,1601912..1602094,1602392..1602605,1603260..1603406,1603870..1604012,1604302..1604505,1605091..1605208,1605731..1605833,1606188..1606464)
location: region:1587121-1606464:1
so has part: feature:1587121-1587228:1:exon
so has part: feature:1590153-1590642:1:exon
so has part: feature:1591379-1592110:1:exon
so has part: feature:1593451-1593657:1:exon
so has part: feature:1594658-1594821:1:exon
so has part: feature:1595452-1595613:1:exon
so has part: feature:1596223-1596299:1:exon
so has part: feature:1596472-1596697:1:exon
so has part: feature:1597120-1597353:1:exon
so has part: feature:1597636-1597727:1:exon
so has part: feature:1598137-1598264:1:exon
so has part: feature:1598415-1598569:1:exon
so has part: feature:1598836-1598970:1:exon
so has part: feature:1600445-1600639:1:exon
so has part: feature:1601912-1602094:1:exon
so has part: feature:1602392-1602605:1:exon
so has part: feature:1603260-1603406:1:exon
so has part: feature:1603870-1604012:1:exon
so has part: feature:1604302-1604505:1:exon
so has part: feature:1605091-1605208:1:exon
so has part: feature:1605731-1605833:1:exon
so has part: feature:1606188-1606464:1:exon

XP_032558152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1587121-1587228:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1590153-1590642:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1591379-1592110:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1593451-1593657:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1594658-1594821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1595452-1595613:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1596223-1596299:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1596472-1596697:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1597120-1597353:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1597636-1597727:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1598137-1598264:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1598415-1598569:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1598836-1598970:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1600445-1600639:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1601912-1602094:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1602392-1602605:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1603260-1603406:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1603870-1604012:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1604302-1604505:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1605091-1605208:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1605731-1605833:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1606188-1606464:1:exon

ATP7A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ATP7A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: copper-transporting ATPase 1
translation: MEAKSVVIGVEGMTCNSCVQTIEQHVGKMNGIHNIKVSLEDKNAVVIYDSRLQTPGTLQEAIYDMGFDATLADSHPQPVIPDTIFLTIPPQSALTPRQICTTLLKNKGILDVKVSSDQKTAVVTFISSIINGKQIIQVVPGVDLNISAAEVTPGSWEDPVWSQASSAVLRLKVDGMTCHSCTSTIEGRLGKLQGIQRVRVSLDNQEAVVIYQPHLITAEEIKHQIEAAGFAASFKKQPRALKLSAIDLERLRSAQPKGSEPAQRENSSGTGSRTVVFRVDGMHCNSCVLNIQGTVSALPAVTGVVVSLEKKSAVISYNPNLISIDRLRKAIEAVSPETFKVSLPEEYENLALLPPLASPLKSHAALKDPSQPLTQVVVINIEGMTCSSCVQSIEGVISQKPGVKSIHVSLSNGNGTIEYDPLQTSPEDLRSSIEDMGFDASFPAKAELPVAKAQPSPEAQLDSHKPEPSSKVPPAHLGRQEAKTISKCYVQVTGMTCASCVANIERNLRREDGIHSILVALMAGKAEVRYNPAVIHPSAIAELIRELGFGATVMENCGEGDGILELVVRGMTCASCVHKIESTLMKTNGVLYCSVALATNKAHIKYDPEAVGPRDVIQVIKDLGFTTSLVKKDRSASHLDHKQEIRQWKRSFVVSFVFCIPVMGLMIYMMVMNSHPSGAHTHHNMSSQEREASHSSMVLDYQLLPGLSVMNFLSFLLCVPVQVFGGWHFYIQAYRALKHSTANMDVLVVLATSIAFLYSFVILLVAMAEKAKVNPVTFFDTPPMLFVFISLGRWLEHVAKGKTSEALARLISLQATEATIVTLGPDNVLLSEEQVDVELVQRGDIVKVVPGGKFPVDGRVIEGHSMVDESLITGEAMPVTKKPGNTVIAGSINQNGSLLIAATHVGADTTLSQIVKLVEEAQTSKAPIQQFADKLSGYFVPFIVAVSVVTLLAWIIIGFVDFGIVEKYFLGYSESLSSAEVIVRFAFQASITVLCIACPCSLGLATPTAVMVGTGVGAQNGILIKGGEPLEMAHKVKVVVFDKTGTITHGTPEVMQVKFLVEGNQLPCHKLLAIVGTAESNSEHPLGAAITKYCKKELDLETLGTCTDFQVVPGCGISCKVSNIEALLYRKNRMVEENNIKNATLVKIEENTDESVQPALIIDAELPTTMTSQKYSVLIGNREWMTRNGLLVRSEVDKAMMEHERRGRTAVLAAVDGVLCGLIAIADTVKPEAELAVYTLKSMGLEVVLMTGDNSKTARSIASQVGITKVFAEVLPSHKVAKVKQLQDEGKRVAMVGDGINDSPALAMANVGIAIGTGTDVAIEAADVVLIRDDLMDVVASIDLSRKTVKRIRINFVFALIYNLIGVPIAAGVFLPIGLVLQPWMGSAAMAASSVSVVLSSLLLKMYQKPRSEKLEYRARGQMRHKSPSEISVHVGIDEAGPGSPKLSLMDRILHYSRASINSLFSDKRSVNSIVLNEPDKHSLLVGDFGEDDDTAL
SIO_010081: ATP7A
subclass of: SO_0000673
so part of: ATP7A
location: join(1587121..1587228,1590153..1590642,1591379..1592110,1593451..1593657,1594658..1594821,1595452..1595613,1596223..1596299,1596472..1596697,1597120..1597353,1597636..1597727,1598137..1598264,1598415..1598569,1598836..1598970,1600445..1600639,1601912..1602094,1602392..1602605,1603260..1603406,1603870..1604012,1604302..1604505,1605091..1605208,1605731..1605833,1606188..1606464)
location: region:1587121-1606464:1
so has part: feature:1587121-1587228:1:exon
so has part: feature:1590153-1590642:1:exon
so has part: feature:1591379-1592110:1:exon
so has part: feature:1593451-1593657:1:exon
so has part: feature:1594658-1594821:1:exon
so has part: feature:1595452-1595613:1:exon
so has part: feature:1596223-1596299:1:exon
so has part: feature:1596472-1596697:1:exon
so has part: feature:1597120-1597353:1:exon
so has part: feature:1597636-1597727:1:exon
so has part: feature:1598137-1598264:1:exon
so has part: feature:1598415-1598569:1:exon
so has part: feature:1598836-1598970:1:exon
so has part: feature:1600445-1600639:1:exon
so has part: feature:1601912-1602094:1:exon
so has part: feature:1602392-1602605:1:exon
so has part: feature:1603260-1603406:1:exon
so has part: feature:1603870-1604012:1:exon
so has part: feature:1604302-1604505:1:exon
so has part: feature:1605091-1605208:1:exon
so has part: feature:1605731-1605833:1:exon
so has part: feature:1606188-1606464:1:exon

XP_032558153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1587121-1587228:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1590153-1590642:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1591379-1592110:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1593451-1593657:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1594658-1594821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1595452-1595613:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1596223-1596299:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1596472-1596697:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1597120-1597353:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1597636-1597727:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1598137-1598264:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1598415-1598569:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1598836-1598970:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1600445-1600639:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1601912-1602094:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1602392-1602605:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1603260-1603406:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1603870-1604012:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1604302-1604505:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1605091-1605208:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1605731-1605833:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1606188-1606464:1:exon

ATP7A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ATP7A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: copper-transporting ATPase 1
translation: MEAKSVVIGVEGMTCNSCVQTIEQHVGKMNGIHNIKVSLEDKNAVVIYDSRLQTPGTLQEAIYDMGFDATLADSHPQPVIPDTIFLTIPPQSALTPRQICTTLLKNKGILDVKVSSDQKTAVVTFISSIINGKQIIQVVPGVDLNISAAEVTPGSWEDPVWSQASSAVLRLKVDGMTCHSCTSTIEGRLGKLQGIQRVRVSLDNQEAVVIYQPHLITAEEIKHQIEAAGFAASFKKQPRALKLSAIDLERLRSAQPKGSEPAQRENSSGTGSRTVVFRVDGMHCNSCVLNIQGTVSALPAVTGVVVSLEKKSAVISYNPNLISIDRLRKAIEAVSPETFKVSLPEEYENLALLPPLASPLKSHAALKDPSQPLTQVVVINIEGMTCSSCVQSIEGVISQKPGVKSIHVSLSNGNGTIEYDPLQTSPEDLRSSIEDMGFDASFPAKAELPVAKAQPSPEAQLDSHKPEPSSKVPPAHLGRQEAKTISKCYVQVTGMTCASCVANIERNLRREDGIHSILVALMAGKAEVRYNPAVIHPSAIAELIRELGFGATVMENCGEGDGILELVVRGMTCASCVHKIESTLMKTNGVLYCSVALATNKAHIKYDPEAVGPRDVIQVIKDLGFTTSLVKKDRSASHLDHKQEIRQWKRSFVVSFVFCIPVMGLMIYMMVMNSHPSGAHTHHNMSSQEREASHSSMVLDYQLLPGLSVMNFLSFLLCVPVQVFGGWHFYIQAYRALKHSTANMDVLVVLATSIAFLYSFVILLVAMAEKAKVNPVTFFDTPPMLFVFISLGRWLEHVAKGKTSEALARLISLQATEATIVTLGPDNVLLSEEQVDVELVQRGDIVKVVPGGKFPVDGRVIEGHSMVDESLITGEAMPVTKKPGNTVIAGSINQNGSLLIAATHVGADTTLSQIVKLVEEAQTSKAPIQQFADKLSGYFVPFIVAVSVVTLLAWIIIGFVDFGIVEKYFLGYSESLSSAEVIVRFAFQASITVLCIACPCSLGLATPTAVMVGTGVGAQNGILIKGGEPLEMAHKVKVVVFDKTGTITHGTPEVMQVKFLVEGNQLPCHKLLAIVGTAESNSEHPLGAAITKYCKKELDLETLGTCTDFQVVPGCGISCKVSNIEALLYRKNRMVEENNIKNATLVKIEENTDESVQPALIIDAELPTTMTSQKYSVLIGNREWMTRNGLLVRSEVDKAMMEHERRGRTAVLAAVDGVLCGLIAIADTVKPEAELAVYTLKSMGLEVVLMTGDNSKTARSIASQVGITKVFAEVLPSHKVAKVKQLQDEGKRVAMVGDGINDSPALAMANVGIAIGTGTDVAIEAADVVLIRDDLMDVVASIDLSRKTVKRIRINFVFALIYNLIGVPIAAGVFLPIGLVLQPWMGSAAMAASSVSVVLSSLLLKMYQKPRSEKLEYRARGQMRHKSPSEISVHVGIDEAGPGSPKLSLMDRILHYSRASINSLFSDKRSVNSIVLNEPDKHSLLVGDFGEDDDTAL
SIO_010081: ATP7A
subclass of: SO_0000673
so part of: ATP7A
location: join(1587121..1587228,1590153..1590642,1591379..1592110,1593451..1593657,1594658..1594821,1595452..1595613,1596223..1596299,1596472..1596697,1597120..1597353,1597636..1597727,1598137..1598264,1598415..1598569,1598836..1598970,1600445..1600639,1601912..1602094,1602392..1602605,1603260..1603406,1603870..1604012,1604302..1604505,1605091..1605208,1605731..1605833,1606188..1606464)
location: region:1587121-1606464:1
so has part: feature:1587121-1587228:1:exon
so has part: feature:1590153-1590642:1:exon
so has part: feature:1591379-1592110:1:exon
so has part: feature:1593451-1593657:1:exon
so has part: feature:1594658-1594821:1:exon
so has part: feature:1595452-1595613:1:exon
so has part: feature:1596223-1596299:1:exon
so has part: feature:1596472-1596697:1:exon
so has part: feature:1597120-1597353:1:exon
so has part: feature:1597636-1597727:1:exon
so has part: feature:1598137-1598264:1:exon
so has part: feature:1598415-1598569:1:exon
so has part: feature:1598836-1598970:1:exon
so has part: feature:1600445-1600639:1:exon
so has part: feature:1601912-1602094:1:exon
so has part: feature:1602392-1602605:1:exon
so has part: feature:1603260-1603406:1:exon
so has part: feature:1603870-1604012:1:exon
so has part: feature:1604302-1604505:1:exon
so has part: feature:1605091-1605208:1:exon
so has part: feature:1605731-1605833:1:exon
so has part: feature:1606188-1606464:1:exon

XP_032558154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1587121-1587228:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1590153-1590642:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1591379-1592110:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1593451-1593657:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1594658-1594821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1595452-1595613:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1596223-1596299:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1596472-1596697:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1597120-1597353:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1597636-1597727:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1598137-1598264:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1598415-1598569:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1598836-1598970:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1600445-1600639:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1601912-1602094:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1602392-1602605:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1603260-1603406:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1603870-1604012:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1604302-1604505:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1605091-1605208:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1605731-1605833:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1606188-1606464:1:exon

ATP7A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ATP7A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: copper-transporting ATPase 1
translation: MEAKSVVIGVEGMTCNSCVQTIEQHVGKMNGIHNIKVSLEDKNAVVIYDSRLQTPGTLQEAIYDMGFDATLADSHPQPVIPDTIFLTIPPQSALTPRQICTTLLKNKGILDVKVSSDQKTAVVTFISSIINGKQIIQVVPGVDLNISAAEVTPGSWEDPVWSQASSAVLRLKVDGMTCHSCTSTIEGRLGKLQGIQRVRVSLDNQEAVVIYQPHLITAEEIKHQIEAAGFAASFKKQPRALKLSAIDLERLRSAQPKGSEPAQRENSSGTGSRTVVFRVDGMHCNSCVLNIQGTVSALPAVTGVVVSLEKKSAVISYNPNLISIDRLRKAIEAVSPETFKVSLPEEYENLALLPPLASPLKSHAALKDPSQPLTQVVVINIEGMTCSSCVQSIEGVISQKPGVKSIHVSLSNGNGTIEYDPLQTSPEDLRSSIEDMGFDASFPAKAELPVAKAQPSPEAQLDSHKPEPSSKVPPAHLGRQEAKTISKCYVQVTGMTCASCVANIERNLRREDGIHSILVALMAGKAEVRYNPAVIHPSAIAELIRELGFGATVMENCGEGDGILELVVRGMTCASCVHKIESTLMKTNGVLYCSVALATNKAHIKYDPEAVGPRDVIQVIKDLGFTTSLVKKDRSASHLDHKQEIRQWKRSFVVSFVFCIPVMGLMIYMMVMNSHPSGAHTHHNMSSQEREASHSSMVLDYQLLPGLSVMNFLSFLLCVPVQVFGGWHFYIQAYRALKHSTANMDVLVVLATSIAFLYSFVILLVAMAEKAKVNPVTFFDTPPMLFVFISLGRWLEHVAKGKTSEALARLISLQATEATIVTLGPDNVLLSEEQVDVELVQRGDIVKVVPGGKFPVDGRVIEGHSMVDESLITGEAMPVTKKPGNTVIAGSINQNGSLLIAATHVGADTTLSQIVKLVEEAQTSKAPIQQFADKLSGYFVPFIVAVSVVTLLAWIIIGFVDFGIVEKYFLGYSESLSSAEVIVRFAFQASITVLCIACPCSLGLATPTAVMVGTGVGAQNGILIKGGEPLEMAHKVKVVVFDKTGTITHGTPEVMQVKFLVEGNQLPCHKLLAIVGTAESNSEHPLGAAITKYCKKELDLETLGTCTDFQVVPGCGISCKVSNIEALLYRKNRMVEENNIKNATLVKIEENTDESVQPALIIDAELPTTMTSQKYSVLIGNREWMTRNGLLVRSEVDKAMMEHERRGRTAVLAAVDGVLCGLIAIADTVKPEAELAVYTLKSMGLEVVLMTGDNSKTARSIASQVGITKVFAEVLPSHKVAKVKQLQDEGKRVAMVGDGINDSPALAMANVGIAIGTGTDVAIEAADVVLIRDDLMDVVASIDLSRKTVKRIRINFVFALIYNLIGVPIAAGVFLPIGLVLQPWMGSAAMAASSVSVVLSSLLLKMYQKPRSEKLEYRARGQMRHKSPSEISVHVGIDEAGPGSPKLSLMDRILHYSRASINSLFSDKRSVNSIVLNEPDKHSLLVGDFGEDDDTAL
SIO_010081: ATP7A
subclass of: SO_0000673
so part of: ATP7A
location: join(1587121..1587228,1590153..1590642,1591379..1592110,1593451..1593657,1594658..1594821,1595452..1595613,1596223..1596299,1596472..1596697,1597120..1597353,1597636..1597727,1598137..1598264,1598415..1598569,1598836..1598970,1600445..1600639,1601912..1602094,1602392..1602605,1603260..1603406,1603870..1604012,1604302..1604505,1605091..1605208,1605731..1605833,1606188..1606464)
location: region:1587121-1606464:1
so has part: feature:1587121-1587228:1:exon
so has part: feature:1590153-1590642:1:exon
so has part: feature:1591379-1592110:1:exon
so has part: feature:1593451-1593657:1:exon
so has part: feature:1594658-1594821:1:exon
so has part: feature:1595452-1595613:1:exon
so has part: feature:1596223-1596299:1:exon
so has part: feature:1596472-1596697:1:exon
so has part: feature:1597120-1597353:1:exon
so has part: feature:1597636-1597727:1:exon
so has part: feature:1598137-1598264:1:exon
so has part: feature:1598415-1598569:1:exon
so has part: feature:1598836-1598970:1:exon
so has part: feature:1600445-1600639:1:exon
so has part: feature:1601912-1602094:1:exon
so has part: feature:1602392-1602605:1:exon
so has part: feature:1603260-1603406:1:exon
so has part: feature:1603870-1604012:1:exon
so has part: feature:1604302-1604505:1:exon
so has part: feature:1605091-1605208:1:exon
so has part: feature:1605731-1605833:1:exon
so has part: feature:1606188-1606464:1:exon

XP_032558155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1587121-1587228:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1590153-1590642:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1591379-1592110:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1593451-1593657:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1594658-1594821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1595452-1595613:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1596223-1596299:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1596472-1596697:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1597120-1597353:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1597636-1597727:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1598137-1598264:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1598415-1598569:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1598836-1598970:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1600445-1600639:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1601912-1602094:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1602392-1602605:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1603260-1603406:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1603870-1604012:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1604302-1604505:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1605091-1605208:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1605731-1605833:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1606188-1606464:1:exon

LOC116793994
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793994
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1611639..1620681)
location: region:1611639-1620681:-1
so has part: feature:1611639-1620681:-1:exon
subclass of: SO_0000011

116793994
type: Gene
SIO_000068: ncbigene

position:1611639:-1
position: 1611639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1620681:-1
position: 1620681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1611639-1620681:-1:exon

LOC116793994
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116793994
product: uncharacterized LOC116793994
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004359666.1
SIO_010081: LOC116793994
subclass of: SO_0000673
so part of: LOC116793994
location: complement(join(1611639..1611958,1620451..1620681))
location: region:1611639-1620681:-1
so has part: feature:1620451-1620681:-1:exon
so has part: feature:1611639-1611958:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1620451-1620681:-1:exon

position:1620451:-1
position: 1620451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1611639-1611958:-1:exon

position:1611958:-1
position: 1611958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PGK1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: PGK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1620813..1632429
location: region:1620813-1632429:1
so has part: feature:1620813-1632429:1:exon
subclass of: SO_0000010

116793984
type: Gene
SIO_000068: ncbigene

position:1620813:1
position: 1620813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1632429:1
position: 1632429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1620813-1632429:1:exon

PGK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PGK1
product: phosphoglycerate kinase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 133 ESTs, 16 long SRA reads, 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_032702265.1
SIO_010081: PGK1
subclass of: SO_0000673
so part of: PGK1
location: join(1620813..1620999,1623493..1623543,1624233..1624388,1624497..1624641,1626800..1626903,1627614..1627733,1628685..1628799,1629094..1629273,1629816..1629993,1630261..1630359,1631974..1632429)
location: region:1620813-1632429:1
so has part: feature:1620813-1620999:1:exon
so has part: feature:1623493-1623543:1:exon
so has part: feature:1624233-1624388:1:exon
so has part: feature:1624497-1624641:1:exon
so has part: feature:1626800-1626903:1:exon
so has part: feature:1627614-1627733:1:exon
so has part: feature:1628685-1628799:1:exon
so has part: feature:1629094-1629273:1:exon
so has part: feature:1629816-1629993:1:exon
so has part: feature:1630261-1630359:1:exon
so has part: feature:1631974-1632429:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1620813-1620999:1:exon

position:1620999:1
position: 1620999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1623493-1623543:1:exon

position:1623493:1
position: 1623493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1623543:1
position: 1623543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1624233-1624388:1:exon

position:1624233:1
position: 1624233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1624388:1
position: 1624388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1624497-1624641:1:exon

position:1624497:1
position: 1624497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1624641:1
position: 1624641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1626800-1626903:1:exon

position:1626800:1
position: 1626800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1626903:1
position: 1626903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1627614-1627733:1:exon

position:1627614:1
position: 1627614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1627733:1
position: 1627733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1628685-1628799:1:exon

position:1628685:1
position: 1628685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1628799:1
position: 1628799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1629094-1629273:1:exon

position:1629094:1
position: 1629094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1629273:1
position: 1629273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1629816-1629993:1:exon

position:1629816:1
position: 1629816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1629993:1
position: 1629993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1630261-1630359:1:exon

position:1630261:1
position: 1630261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1630359:1
position: 1630359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1631974-1632429:1:exon

position:1631974:1
position: 1631974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PGK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PGK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoglycerate kinase 1
translation: MSLSNKLTLDKVDVKGKRVVMRVDFNVPMKDHKITNNQRIKAAVPTIKHCLDHGAKSVVLMSHLGRPDGVPMPEKFSLAPVAVELKALLGREVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVEEEGKGKDASGNKIKADAPKVEAFRASLSKLGDIYVNDAFGTAHRAHSSMVGVNLPQKAAGFLMKKELDYFAKALESPERPFLAILGGAKVQDKIQLISNMLDKVNEMIIGGGMAFTFLKVLNNMEIGNSLFDEEGSKIVKDLMAKAEKNGVKITLPVDFITADKFDENAQTGEATVASGIPAGWMGLDCGPESVKKFVEVVGRAKQIVWNGPVGVFEWDKFSKGTKALMDKVVEVTGKGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDALSNV
SIO_010081: PGK1
subclass of: SO_0000673
so part of: PGK1
location: join(1620935..1620999,1623493..1623543,1624233..1624388,1624497..1624641,1626800..1626903,1627614..1627733,1628685..1628799,1629094..1629273,1629816..1629993,1630261..1630359,1631974..1632014)
location: region:1620935-1632014:1
so has part: feature:1620935-1620999:1:exon
so has part: feature:1623493-1623543:1:exon
so has part: feature:1624233-1624388:1:exon
so has part: feature:1624497-1624641:1:exon
so has part: feature:1626800-1626903:1:exon
so has part: feature:1627614-1627733:1:exon
so has part: feature:1628685-1628799:1:exon
so has part: feature:1629094-1629273:1:exon
so has part: feature:1629816-1629993:1:exon
so has part: feature:1630261-1630359:1:exon
so has part: feature:1631974-1632014:1:exon

XP_032558156.1
type: Protein
SIO_000068: ncbiprotein

position:1620935:1
position: 1620935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1632014:1
position: 1632014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1620935-1620999:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1623493-1623543:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1624233-1624388:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1624497-1624641:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1626800-1626903:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1627614-1627733:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1628685-1628799:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1629094-1629273:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1629816-1629993:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1630261-1630359:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1631974-1632014:1:exon

AMOT
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: AMOT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1635295..1697910
location: region:1635295-1697910:1
so has part: feature:1635295-1697910:1:exon
subclass of: SO_0000010

116793990
type: Gene
SIO_000068: ncbigene

position:1635295:1
position: 1635295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1697910:1
position: 1697910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1635295-1697910:1:exon

AMOT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: AMOT
product: angiomotin
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 2 long SRA reads, 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032702272.1
SIO_010081: AMOT
subclass of: SO_0000673
so part of: AMOT
location: join(1635295..1635469,1661083..1661248,1663717..1664635,1670992..1671445,1673229..1673373,1674731..1674834,1677449..1677594,1687002..1687151,1688645..1688835,1690736..1690858,1691515..1691747,1692574..1692798,1693838..1697910)
location: region:1635295-1697910:1
so has part: feature:1635295-1635469:1:exon
so has part: feature:1661083-1661248:1:exon
so has part: feature:1663717-1664635:1:exon
so has part: feature:1670992-1671445:1:exon
so has part: feature:1673229-1673373:1:exon
so has part: feature:1674731-1674834:1:exon
so has part: feature:1677449-1677594:1:exon
so has part: feature:1687002-1687151:1:exon
so has part: feature:1688645-1688835:1:exon
so has part: feature:1690736-1690858:1:exon
so has part: feature:1691515-1691747:1:exon
so has part: feature:1692574-1692798:1:exon
so has part: feature:1693838-1697910:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1635295-1635469:1:exon

position:1635469:1
position: 1635469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1661083-1661248:1:exon

position:1661083:1
position: 1661083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1661248:1
position: 1661248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1663717-1664635:1:exon

position:1663717:1
position: 1663717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1664635:1
position: 1664635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1670992-1671445:1:exon

position:1670992:1
position: 1670992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1671445:1
position: 1671445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1673229-1673373:1:exon

position:1673229:1
position: 1673229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1673373:1
position: 1673373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1674731-1674834:1:exon

position:1674731:1
position: 1674731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1674834:1
position: 1674834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1677449-1677594:1:exon

position:1677449:1
position: 1677449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1677594:1
position: 1677594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1687002-1687151:1:exon

position:1687002:1
position: 1687002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1687151:1
position: 1687151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1688645-1688835:1:exon

position:1688645:1
position: 1688645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1688835:1
position: 1688835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1690736-1690858:1:exon

position:1690736:1
position: 1690736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1690858:1
position: 1690858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1691515-1691747:1:exon

position:1691515:1
position: 1691515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1691747:1
position: 1691747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1692574-1692798:1:exon

position:1692574:1
position: 1692574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1692798:1
position: 1692798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1693838-1697910:1:exon

position:1693838:1
position: 1693838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AMOT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: AMOT
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:1674825..1674827,aa:OTHER)
product: LOW QUALITY PROTEIN: angiomotin
translation: MRNSEEQAATTVLQRLLQEQLRYGNPNDNRNLLALHQQATGNAPPFSSTGSPASQNEGLSSQDHQLVTHAARQEPQGQEIQVDNSIMEKQLSPRLQNSEDLPTYEEAKVQSQYFRGQPHASVGAAFYVTGVTNQKMRTEGRPTVQRVSPGKVHQDEGLKDLKQGHVRSLSERLMQLSLATSGVKAHAPVTSAPLSPLSPLSPQQSSDPYKNSGSNEFYKNSVQPPSQPSMKGMEQRGPPPEYPYKNVSTPSMNCKPQDSGHFYSDHRMSQQGRADGPMMRYQHPPEYGSVRQNPDVPLQLQQRPPHHHSPTSSLTSLGSLTLLQSPPPSRLSPSQHQQPLTPSQADPGILPRTQQPFLSNQVHQGDLYRLCQPFLGPQQQQGDSYSVMPRAQQIPSPYQQMQVDPFAIVSRAQQMVEILSEENRSLRQELDGCYEKVARLQKLETEIQQVSEAYKNLEKSSSKRDALEKAMRNKLEGEIRRLHDFNRDLRERMETANXQLAEKEFEGSEDNRKTISQLFAQRXVDNKETQREKEKLEIELAAARSTNEDQRRHIEIRDQALNNAQAKVVKLEEELKKKQVYVEKVEKMQQALVQLQAACEKREQLEHRLRTRLERELESLRMQQRQGTSQAANVSEYNATALMELLREKEERILALEADMTKWEQKYLEESVMRQFALDAAATVAAQRDTTVISHSPNPSYDTSLEARIQKEEEEILLANRRCLDMEGRIKTLHAQIIEKDAMIKVLQQRSRKEPGKTDQLSSMRPAKSLMSISNAGSGLLSHSSTLSSTPILEEKREDKSWKGSLGVLLGTEYRSESIPSTPSPVLPSTPLLSAHSKTGSRDCSTQTDRGSEQSKAAPSPAAPAPGRLPSTSLTYSAEKTDGPXFHSSTLERKPLLDHGQTFQMERWLEYLILKACTKI
SIO_010081: AMOT
subclass of: SO_0000673
so part of: AMOT
location: join(1663764..1664635,1670992..1671445,1673229..1673373,1674731..1674834,1677449..1677594,1687002..1687151,1688645..1688835,1690736..1690858,1691515..1691747,1692574..1692798,1693838..1693955)
location: region:1663764-1693955:1
so has part: feature:1663764-1664635:1:exon
so has part: feature:1670992-1671445:1:exon
so has part: feature:1673229-1673373:1:exon
so has part: feature:1674731-1674834:1:exon
so has part: feature:1677449-1677594:1:exon
so has part: feature:1687002-1687151:1:exon
so has part: feature:1688645-1688835:1:exon
so has part: feature:1690736-1690858:1:exon
so has part: feature:1691515-1691747:1:exon
so has part: feature:1692574-1692798:1:exon
so has part: feature:1693838-1693955:1:exon

XP_032558163.1
type: Protein
SIO_000068: ncbiprotein

position:1663764:1
position: 1663764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1693955:1
position: 1693955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1663764-1664635:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1670992-1671445:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1673229-1673373:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1674731-1674834:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1677449-1677594:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1687002-1687151:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1688645-1688835:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1690736-1690858:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1691515-1691747:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1692574-1692798:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1693838-1693955:1:exon

TRPC5
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: TRPC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1765850..1869580
location: region:1765850-1869580:1
so has part: feature:1765850-1869580:1:exon
subclass of: SO_0000010

116793897
type: Gene
SIO_000068: ncbigene

position:1765850:1
position: 1765850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1869580:1
position: 1869580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1765850-1869580:1:exon

TRPC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: TRPC5
product: transient receptor potential cation channel subfamily C member 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032702098.1
SIO_010081: TRPC5
subclass of: SO_0000673
so part of: TRPC5
location: join(1765850..1765880,1796789..1797187,1814103..1814624,1830863..1831199,1834325..1834464,1838390..1838712,1843059..1843254,1858686..1858892,1859071..1859112,1860754..1860843,1861533..1869580)
location: region:1765850-1869580:1
so has part: feature:1765850-1765880:1:exon
so has part: feature:1796789-1797187:1:exon
so has part: feature:1814103-1814624:1:exon
so has part: feature:1830863-1831199:1:exon
so has part: feature:1834325-1834464:1:exon
so has part: feature:1838390-1838712:1:exon
so has part: feature:1843059-1843254:1:exon
so has part: feature:1858686-1858892:1:exon
so has part: feature:1859071-1859112:1:exon
so has part: feature:1860754-1860843:1:exon
so has part: feature:1861533-1869580:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1765850-1765880:1:exon

position:1765880:1
position: 1765880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1796789-1797187:1:exon

position:1796789:1
position: 1796789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1797187:1
position: 1797187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1814103-1814624:1:exon

position:1814103:1
position: 1814103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1814624:1
position: 1814624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1830863-1831199:1:exon

position:1830863:1
position: 1830863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1831199:1
position: 1831199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1834325-1834464:1:exon

position:1834325:1
position: 1834325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1834464:1
position: 1834464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1838390-1838712:1:exon

position:1838390:1
position: 1838390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1838712:1
position: 1838712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1843059-1843254:1:exon

position:1843059:1
position: 1843059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1843254:1
position: 1843254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1858686-1858892:1:exon

position:1858686:1
position: 1858686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1858892:1
position: 1858892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1859071-1859112:1:exon

position:1859071:1
position: 1859071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1859112:1
position: 1859112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1860754-1860843:1:exon

position:1860754:1
position: 1860754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1860843:1
position: 1860843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1861533-1869580:1:exon

position:1861533:1
position: 1861533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRPC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: TRPC5
product: transient receptor potential cation channel subfamily C member 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032702099.1
SIO_010081: TRPC5
subclass of: SO_0000673
so part of: TRPC5
location: join(1765850..1765880,1796789..1797187,1814103..1814624,1830863..1831199,1834325..1834464,1838390..1838712,1843059..1843254,1858686..1858892,1859071..1859112,1860754..1860843,1861533..1862311,1868299..1869580)
location: region:1765850-1869580:1
so has part: feature:1765850-1765880:1:exon
so has part: feature:1796789-1797187:1:exon
so has part: feature:1814103-1814624:1:exon
so has part: feature:1830863-1831199:1:exon
so has part: feature:1834325-1834464:1:exon
so has part: feature:1838390-1838712:1:exon
so has part: feature:1843059-1843254:1:exon
so has part: feature:1858686-1858892:1:exon
so has part: feature:1859071-1859112:1:exon
so has part: feature:1860754-1860843:1:exon
so has part: feature:1861533-1862311:1:exon
so has part: feature:1868299-1869580:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1765850-1765880:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1796789-1797187:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1814103-1814624:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1830863-1831199:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1834325-1834464:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1838390-1838712:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1843059-1843254:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1858686-1858892:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1859071-1859112:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1860754-1860843:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1861533-1862311:1:exon

position:1862311:1
position: 1862311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1868299-1869580:1:exon

position:1868299:1
position: 1868299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRPC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: TRPC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: short transient receptor potential channel 5
translation: MAQLYYKKVNYSPYRDRIPLQIVRAEAELSAEEKAYLSAVEKGDYASVKHALQEAEIYYNININCMDPLGRSALLIAIENENLEIMELLLSHSVYVGDALLYAIRKEVVGAVELLLNYRKPSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRRVTIPRPHQIRCNCVECVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAEYEELSQQCKRFAKDLLDQARSSRELEIILNHRDDQSEELDPQKCHDLAKLKVAIKYHQKEFVAQPNCQQLLATLWYDGFPGWRRKHWAVKLLTCVTIGLLFPVLSVAYLIAPKSRLGLFIKKPFIKFICHTGSYLTFLFMLLLASQHIVRTDLHMQGPPPTIVEWMILPWVLGFIWGEIKEMWDGGFNEYVHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEALFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFYYETSASEEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGATLPPPFNIVPSPKSVWYLCKWIHNQLCPGDDSDNEQKRHENLKTFTERHADNLIQNQHYQEVIRNLVKRYVAAMIRTSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKPQRRSYSTSSTEVSQKDETNEDGAGEKSRAKSVSFNVANKKKDFNVSALIKTMSGIDIVEEKPKSNGISKRSFVRNGNRVQRLSSSKKESFKRLGLLFSKMNGHVPEPSSEPMYTISDGIIQPHYMWKDIKYSQIDREREENCSRSEINLNEVAYSGNTRLTGQSKECPVVCASSLHCASSICSSNSKLIDSSEDVFDSWGEACDLFINQWKDGQEDHVTTRL
SIO_010081: TRPC5
subclass of: SO_0000673
so part of: TRPC5
location: join(1796810..1797187,1814103..1814624,1830863..1831199,1834325..1834464,1838390..1838712,1843059..1843254,1858686..1858892,1859071..1859112,1860754..1860843,1861533..1862267)
location: region:1796810-1862267:1
so has part: feature:1796810-1797187:1:exon
so has part: feature:1814103-1814624:1:exon
so has part: feature:1830863-1831199:1:exon
so has part: feature:1834325-1834464:1:exon
so has part: feature:1838390-1838712:1:exon
so has part: feature:1843059-1843254:1:exon
so has part: feature:1858686-1858892:1:exon
so has part: feature:1859071-1859112:1:exon
so has part: feature:1860754-1860843:1:exon
so has part: feature:1861533-1862267:1:exon

XP_032557989.1
type: Protein
SIO_000068: ncbiprotein

position:1796810:1
position: 1796810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1862267:1
position: 1862267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1796810-1797187:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1814103-1814624:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1830863-1831199:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1834325-1834464:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1838390-1838712:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1843059-1843254:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1858686-1858892:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1859071-1859112:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1860754-1860843:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1861533-1862267:1:exon

TRPC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: TRPC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: short transient receptor potential channel 5
translation: MAQLYYKKVNYSPYRDRIPLQIVRAEAELSAEEKAYLSAVEKGDYASVKHALQEAEIYYNININCMDPLGRSALLIAIENENLEIMELLLSHSVYVGDALLYAIRKEVVGAVELLLNYRKPSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRRVTIPRPHQIRCNCVECVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAEYEELSQQCKRFAKDLLDQARSSRELEIILNHRDDQSEELDPQKCHDLAKLKVAIKYHQKEFVAQPNCQQLLATLWYDGFPGWRRKHWAVKLLTCVTIGLLFPVLSVAYLIAPKSRLGLFIKKPFIKFICHTGSYLTFLFMLLLASQHIVRTDLHMQGPPPTIVEWMILPWVLGFIWGEIKEMWDGGFNEYVHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEALFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFYYETSASEEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGATLPPPFNIVPSPKSVWYLCKWIHNQLCPGDDSDNEQKRHENLKTFTERHADNLIQNQHYQEVIRNLVKRYVAAMIRTSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKPQRRSYSTSSTEVSQKDETNEDGAGEKSRAKSVSFNVANKKKDFNVSALIKTMSGIDIVEEKPKSNGISKRSFVRNGNRVQRLSSSKKESFKRLGLLFSKMNGHVPEPSSEPMYTISDGIIQPHYMWKDIKYSQIDREREENCSRSEINLNEVAYSGNTRLTGQSKECPVVCASSLHCASSICSSNSKLIDSSEDVFDSWGEACDLFINQWKDGQEDHVTTRL
SIO_010081: TRPC5
subclass of: SO_0000673
so part of: TRPC5
location: join(1796810..1797187,1814103..1814624,1830863..1831199,1834325..1834464,1838390..1838712,1843059..1843254,1858686..1858892,1859071..1859112,1860754..1860843,1861533..1862267)
location: region:1796810-1862267:1
so has part: feature:1796810-1797187:1:exon
so has part: feature:1814103-1814624:1:exon
so has part: feature:1830863-1831199:1:exon
so has part: feature:1834325-1834464:1:exon
so has part: feature:1838390-1838712:1:exon
so has part: feature:1843059-1843254:1:exon
so has part: feature:1858686-1858892:1:exon
so has part: feature:1859071-1859112:1:exon
so has part: feature:1860754-1860843:1:exon
so has part: feature:1861533-1862267:1:exon

XP_032557990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1796810-1797187:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1814103-1814624:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1830863-1831199:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1834325-1834464:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1838390-1838712:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1843059-1843254:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1858686-1858892:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1859071-1859112:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1860754-1860843:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1861533-1862267:1:exon

ALG13
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: ALG13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1875546..1902985)
location: region:1875546-1902985:-1
so has part: feature:1875546-1902985:-1:exon
subclass of: SO_0000010

116794022
type: Gene
SIO_000068: ncbigene

position:1875546:-1
position: 1875546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1902985:-1
position: 1902985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1875546-1902985:-1:exon

ALG13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ALG13
product: ALG13 UDP-N-acetylglucosaminyltransferase subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032702337.1
SIO_010081: ALG13
subclass of: SO_0000673
so part of: ALG13
location: complement(join(1875546..1876464,1876569..1876749,1877604..1877644,1881104..1881226,1882427..1882598,1882957..1883019,1883636..1883691,1883818..1883877,1884322..1884466,1886457..1886613,1886803..1886916,1887081..1887315,1888012..1888139,1888767..1888867,1889743..1889807,1890916..1891024,1891742..1891817,1892552..1892732,1893076..1893157,1894950..1895022,1895953..1895999,1896726..1896776,1897618..1897701,1898053..1898250,1898286..1898595,1899894..1899998,1901740..1901878,1902096..1902261,1902805..1902985))
location: region:1875546-1902985:-1
so has part: feature:1902805-1902985:-1:exon
so has part: feature:1902096-1902261:-1:exon
so has part: feature:1901740-1901878:-1:exon
so has part: feature:1899894-1899998:-1:exon
so has part: feature:1898286-1898595:-1:exon
so has part: feature:1898053-1898250:-1:exon
so has part: feature:1897618-1897701:-1:exon
so has part: feature:1896726-1896776:-1:exon
so has part: feature:1895953-1895999:-1:exon
so has part: feature:1894950-1895022:-1:exon
so has part: feature:1893076-1893157:-1:exon
so has part: feature:1892552-1892732:-1:exon
so has part: feature:1891742-1891817:-1:exon
so has part: feature:1890916-1891024:-1:exon
so has part: feature:1889743-1889807:-1:exon
so has part: feature:1888767-1888867:-1:exon
so has part: feature:1888012-1888139:-1:exon
so has part: feature:1887081-1887315:-1:exon
so has part: feature:1886803-1886916:-1:exon
so has part: feature:1886457-1886613:-1:exon
so has part: feature:1884322-1884466:-1:exon
so has part: feature:1883818-1883877:-1:exon
so has part: feature:1883636-1883691:-1:exon
so has part: feature:1882957-1883019:-1:exon
so has part: feature:1882427-1882598:-1:exon
so has part: feature:1881104-1881226:-1:exon
so has part: feature:1877604-1877644:-1:exon
so has part: feature:1876569-1876749:-1:exon
so has part: feature:1875546-1876464:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1902805-1902985:-1:exon

position:1902805:-1
position: 1902805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1902096-1902261:-1:exon

position:1902096:-1
position: 1902096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1902261:-1
position: 1902261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1901740-1901878:-1:exon

position:1901740:-1
position: 1901740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1901878:-1
position: 1901878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1899894-1899998:-1:exon

position:1899894:-1
position: 1899894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1899998:-1
position: 1899998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1898286-1898595:-1:exon

position:1898286:-1
position: 1898286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1898595:-1
position: 1898595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1898053-1898250:-1:exon

position:1898053:-1
position: 1898053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1898250:-1
position: 1898250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1897618-1897701:-1:exon

position:1897618:-1
position: 1897618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1897701:-1
position: 1897701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1896726-1896776:-1:exon

position:1896726:-1
position: 1896726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1896776:-1
position: 1896776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1895953-1895999:-1:exon

position:1895953:-1
position: 1895953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1895999:-1
position: 1895999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1894950-1895022:-1:exon

position:1894950:-1
position: 1894950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1895022:-1
position: 1895022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1893076-1893157:-1:exon

position:1893076:-1
position: 1893076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1893157:-1
position: 1893157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1892552-1892732:-1:exon

position:1892552:-1
position: 1892552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1892732:-1
position: 1892732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1891742-1891817:-1:exon

position:1891742:-1
position: 1891742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1891817:-1
position: 1891817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1890916-1891024:-1:exon

position:1890916:-1
position: 1890916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1891024:-1
position: 1891024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1889743-1889807:-1:exon

position:1889743:-1
position: 1889743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1889807:-1
position: 1889807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1888767-1888867:-1:exon

position:1888767:-1
position: 1888767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1888867:-1
position: 1888867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1888012-1888139:-1:exon

position:1888012:-1
position: 1888012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1888139:-1
position: 1888139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1887081-1887315:-1:exon

position:1887081:-1
position: 1887081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1887315:-1
position: 1887315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1886803-1886916:-1:exon

position:1886803:-1
position: 1886803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1886916:-1
position: 1886916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1886457-1886613:-1:exon

position:1886457:-1
position: 1886457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1886613:-1
position: 1886613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1884322-1884466:-1:exon

position:1884322:-1
position: 1884322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1884466:-1
position: 1884466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1883818-1883877:-1:exon

position:1883818:-1
position: 1883818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1883877:-1
position: 1883877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1883636-1883691:-1:exon

position:1883636:-1
position: 1883636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1883691:-1
position: 1883691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1882957-1883019:-1:exon

position:1882957:-1
position: 1882957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1883019:-1
position: 1883019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1882427-1882598:-1:exon

position:1882427:-1
position: 1882427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1882598:-1
position: 1882598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1881104-1881226:-1:exon

position:1881104:-1
position: 1881104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1881226:-1
position: 1881226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1877604-1877644:-1:exon

position:1877604:-1
position: 1877604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1877644:-1
position: 1877644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1876569-1876749:-1:exon

position:1876569:-1
position: 1876569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1876749:-1
position: 1876749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1875546-1876464:-1:exon

position:1876464:-1
position: 1876464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ALG13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ALG13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13
translation: MKSVFVTVGTTSFDELIATARSPPALQALQSRGYQKVVLQVGRGALQPPLPSGSAALEVESFRFKDSLAEDLRSADLVISHAGAGSCLETLEKGKPLIVVINDRLMNNHQLELAKQLHRDGYVLCCNCSTLVETLQLMDLSTLKPFPPGQPEKFALFLDKVVGFNLSPARERAGMSQGILRNQLARCSPWLRSQGCRAMEVKGLAQQGLFPGHVGEERAAHSRRGLERGGRTGQLKMARAGKLLRDPREQRRHRGPVPGGSHRAIPQRRPRAEPPRAELASASAGKMQKGWKKYFGQKSFSEVAMDEYLGSLGLYRKMTAKDASCLFRAVSEQLFSSQIHHLEVRKACVSFMRQHQSKFESYVEGSFEKYLERLRDPKESAGQLEISALSMMYKRDFILYRYPGKPPTYATDNDFEDKILLCCSGNGHYDSVYTKQFQENAAVCQALLYEVLYKGVFGMDEEELRSAVEVFRSGSKKNRNSGRVGSEDANFGCLHEKVSRNPSEKRVDDWEGNDAGNPEEAKFKQGIEEEKPSENPPKMPVPYKVLKALDSAIYRNVEFDVWLDSRKELQKTDYMVFAGRQYYLGDKCQVRLEPGERYYNAHIQEVGQEGNTLTVFVEELAEKHTVPLANLKPVTQVAPVLAWNVAHNRRGGAYQKITGGHFSGIEMGMKTRKRMLKKVRGKEVFMTVAYSRGQPLLPPRLQHNVPSGRSPPVHCSQGGANMAPYKPYHQQNPQRHHRGFGMLRGSAQFINRHSMVGPQIAFNPSPGKRCYQSYDNFSCRSRSYSRSRRQLQCENKECQDGFMAGHGEEPQGPEETLTFYEIEGENDAAFPTLPFAFQSQSSPAPTVHSPAGFWVARRNQNSVSPNKQTLNSSEEEEAISENASCSISLVGKFHEEYIYAPPDPDCETATVFSSAEPTANLEEGPVSVSPHEEGASYSYPQKVLVNSAGVSASTDVYTAPATGLSSNSATSTPASVTTATPPQTAVQPVIVSPFSVGRPAVSSVPFPTYSAPLPPVSEVGEAGAVLPAYSCDPSGSDLPRDTKVLRYYFNLGLQYCHQSYWPSMVYVQPVLPPSSVEVYPAYTEPAPALDQSVPQIFTDARQTEVQVPLEAPANGNFPNAEPPPLCYGPVYYPVVSDPFSQQALPGFDTVVPAYHYISTWHPVNPAHGSSPQMANAVSSGPPHQISYIASPNPVPHDMPQGM
SIO_010081: ALG13
subclass of: SO_0000673
so part of: ALG13
location: complement(join(1876199..1876464,1876569..1876749,1877604..1877644,1881104..1881226,1882427..1882598,1882957..1883019,1883636..1883691,1883818..1883877,1884322..1884466,1886457..1886613,1886803..1886916,1887081..1887315,1888012..1888139,1888767..1888867,1889743..1889807,1890916..1891024,1891742..1891817,1892552..1892732,1893076..1893157,1894950..1895022,1895953..1895999,1896726..1896776,1897618..1897701,1898053..1898250,1898286..1898595,1899894..1899998,1901740..1901878,1902096..1902261,1902805..1902885))
location: region:1876199-1902885:-1
so has part: feature:1902805-1902885:-1:exon
so has part: feature:1902096-1902261:-1:exon
so has part: feature:1901740-1901878:-1:exon
so has part: feature:1899894-1899998:-1:exon
so has part: feature:1898286-1898595:-1:exon
so has part: feature:1898053-1898250:-1:exon
so has part: feature:1897618-1897701:-1:exon
so has part: feature:1896726-1896776:-1:exon
so has part: feature:1895953-1895999:-1:exon
so has part: feature:1894950-1895022:-1:exon
so has part: feature:1893076-1893157:-1:exon
so has part: feature:1892552-1892732:-1:exon
so has part: feature:1891742-1891817:-1:exon
so has part: feature:1890916-1891024:-1:exon
so has part: feature:1889743-1889807:-1:exon
so has part: feature:1888767-1888867:-1:exon
so has part: feature:1888012-1888139:-1:exon
so has part: feature:1887081-1887315:-1:exon
so has part: feature:1886803-1886916:-1:exon
so has part: feature:1886457-1886613:-1:exon
so has part: feature:1884322-1884466:-1:exon
so has part: feature:1883818-1883877:-1:exon
so has part: feature:1883636-1883691:-1:exon
so has part: feature:1882957-1883019:-1:exon
so has part: feature:1882427-1882598:-1:exon
so has part: feature:1881104-1881226:-1:exon
so has part: feature:1877604-1877644:-1:exon
so has part: feature:1876569-1876749:-1:exon
so has part: feature:1876199-1876464:-1:exon

XP_032558228.1
type: Protein
SIO_000068: ncbiprotein

position:1876199:-1
position: 1876199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1902885:-1
position: 1902885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1902805-1902885:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1902096-1902261:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1901740-1901878:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1899894-1899998:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1898286-1898595:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1898053-1898250:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1897618-1897701:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1896726-1896776:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1895953-1895999:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1894950-1895022:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1893076-1893157:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1892552-1892732:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1891742-1891817:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1890916-1891024:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1889743-1889807:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1888767-1888867:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1888012-1888139:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1887081-1887315:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1886803-1886916:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1886457-1886613:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1884322-1884466:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1883818-1883877:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1883636-1883691:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1882957-1883019:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1882427-1882598:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1881104-1881226:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1877604-1877644:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1876569-1876749:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1876199-1876464:-1:exon

SERTM2
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: SERTM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1904995..1926664)
location: region:1904995-1926664:-1
so has part: feature:1904995-1926664:-1:exon
subclass of: SO_0000010

116793900
type: Gene
SIO_000068: ncbigene

position:1904995:-1
position: 1904995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1926664:-1
position: 1926664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1904995-1926664:-1:exon

SERTM2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 296741
gene: SERTM2
product: serine rich and transmembrane domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004359626.1
SIO_010081: SERTM2
so part of: SERTM2
location: complement(join(1904995..1905054,1920226..1923057,1926320..1926664))
location: region:1904995-1926664:-1
so has part: feature:1926320-1926664:-1:exon
so has part: feature:1920226-1923057:-1:exon
so has part: feature:1904995-1905054:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1926320-1926664:-1:exon

position:1926320:-1
position: 1926320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1920226-1923057:-1:exon

position:1920226:-1
position: 1920226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1923057:-1
position: 1923057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1904995-1905054:-1:exon

position:1905054:-1
position: 1905054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SERTM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SERTM2
product: serine rich and transmembrane domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032702101.1
SIO_010081: SERTM2
subclass of: SO_0000673
so part of: SERTM2
location: complement(join(1919315..1922683,1926320..1926664))
location: region:1919315-1926664:-1
so has part: feature:1926320-1926664:-1:exon
so has part: feature:1919315-1922683:-1:exon

position:1919315:-1
position: 1919315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1926320-1926664:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1919315-1922683:-1:exon

position:1922683:-1
position: 1922683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SERTM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SERTM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine-rich and transmembrane domain-containing 2
translation: MTETYLKSRGNLTGRVHLPTLATEVDTTADKYSGLYVYVGLFLTLLAILLLLLFSMLLRLKHVVSPVSVSPEGTENAQQFTDVEMHSRIPTT
SIO_010081: SERTM2
subclass of: SO_0000673
so part of: SERTM2
location: complement(1922188..1922466)
location: region:1922188-1922466:-1
so has part: feature:1922188-1922466:-1:exon

XP_032557992.1
type: Protein
SIO_000068: ncbiprotein

position:1922188:-1
position: 1922188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1922466:-1
position: 1922466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1922188-1922466:-1:exon

LOC116793898
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793898
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1936875..1975874)
location: region:1936875-1975874:-1
so has part: feature:1936875-1975874:-1:exon
subclass of: SO_0000010

116793898
type: Gene
SIO_000068: ncbigene

position:1936875:-1
position: 1936875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1975874:-1
position: 1975874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1936875-1975874:-1:exon

LOC116793898
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116793898
product: protein fantom-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032702100.1
SIO_010081: LOC116793898
subclass of: SO_0000673
so part of: LOC116793898
location: complement(join(1936875..1938585,1943058..1943191,1945563..1945647,1948837..1949020,1951861..1951985,1953086..1953254,1957263..1957346,1958873..1959000,1960148..1960600,1961784..1961901,1962545..1962724,1963596..1963646,1963862..1963968,1966110..1966249,1968060..1968133,1969388..1969534,1971342..1971447,1973318..1973462,1974509..1974608,1975657..1975874))
location: region:1936875-1975874:-1
so has part: feature:1975657-1975874:-1:exon
so has part: feature:1974509-1974608:-1:exon
so has part: feature:1973318-1973462:-1:exon
so has part: feature:1971342-1971447:-1:exon
so has part: feature:1969388-1969534:-1:exon
so has part: feature:1968060-1968133:-1:exon
so has part: feature:1966110-1966249:-1:exon
so has part: feature:1963862-1963968:-1:exon
so has part: feature:1963596-1963646:-1:exon
so has part: feature:1962545-1962724:-1:exon
so has part: feature:1961784-1961901:-1:exon
so has part: feature:1960148-1960600:-1:exon
so has part: feature:1958873-1959000:-1:exon
so has part: feature:1957263-1957346:-1:exon
so has part: feature:1953086-1953254:-1:exon
so has part: feature:1951861-1951985:-1:exon
so has part: feature:1948837-1949020:-1:exon
so has part: feature:1945563-1945647:-1:exon
so has part: feature:1943058-1943191:-1:exon
so has part: feature:1936875-1938585:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1975657-1975874:-1:exon

position:1975657:-1
position: 1975657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1974509-1974608:-1:exon

position:1974509:-1
position: 1974509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1974608:-1
position: 1974608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1973318-1973462:-1:exon

position:1973318:-1
position: 1973318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1973462:-1
position: 1973462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1971342-1971447:-1:exon

position:1971342:-1
position: 1971342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1971447:-1
position: 1971447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1969388-1969534:-1:exon

position:1969388:-1
position: 1969388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1969534:-1
position: 1969534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1968060-1968133:-1:exon

position:1968060:-1
position: 1968060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1968133:-1
position: 1968133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1966110-1966249:-1:exon

position:1966110:-1
position: 1966110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1966249:-1
position: 1966249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1963862-1963968:-1:exon

position:1963862:-1
position: 1963862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1963968:-1
position: 1963968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1963596-1963646:-1:exon

position:1963596:-1
position: 1963596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1963646:-1
position: 1963646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1962545-1962724:-1:exon

position:1962545:-1
position: 1962545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1962724:-1
position: 1962724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1961784-1961901:-1:exon

position:1961784:-1
position: 1961784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1961901:-1
position: 1961901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1960148-1960600:-1:exon

position:1960148:-1
position: 1960148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1960600:-1
position: 1960600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1958873-1959000:-1:exon

position:1958873:-1
position: 1958873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1959000:-1
position: 1959000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1957263-1957346:-1:exon

position:1957263:-1
position: 1957263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1957346:-1
position: 1957346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1953086-1953254:-1:exon

position:1953086:-1
position: 1953086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1953254:-1
position: 1953254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1951861-1951985:-1:exon

position:1951861:-1
position: 1951861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1951985:-1
position: 1951985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1948837-1949020:-1:exon

position:1948837:-1
position: 1948837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1949020:-1
position: 1949020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1945563-1945647:-1:exon

position:1945563:-1
position: 1945563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1945647:-1
position: 1945647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1943058-1943191:-1:exon

position:1943058:-1
position: 1943058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1943191:-1
position: 1943191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1936875-1938585:-1:exon

position:1938585:-1
position: 1938585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116793898
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116793898
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein fantom-like
translation: MRLQNLEVRSSDLVLPKYGQSLLEDSRAEIRNLETVIDSQRKHIEELEHAREILVSQLRRKEKEIEDSLLRLKEQGTASQRLNIQDNVEMIKVRKQLVEKSNALSAMEGKFLQLQENLKNLRTNHDALLAKGDELNAQLKEERLKCFHLQKELQSVTISNRRTEELQERINYLEKENELLKENYDKLHNSVFSLPYDQQWKAKEQQLKLQIAKLETAIRSDLADKNEILDKIKVERDQKEKLMQDNKDLQSCYLEQKQQLDDLKNQVKFLTKESDVDVAELSEALLLIKDRKQQKNGDPLFVEKPEDEIHKDSEHSIRELQLTHAETVQELEKTRSMLIMQHKISKDYQTEVETMTKKMERIQKDSEFKLEQYAHLLDIRAARIRKLEAQLRDIVYDAKSAKSRPEISPGDPMDGFVETIPLEKGENLFEIHLSKAIFSPEAMHAFGDQEPATFCTYAFYDFELQISPVVRGGAPSYDFTSQYLVQADDTFFHYIQQSSVTLELHRAFGVEYHTVATCHLSFQDILESNGKIYSTANLVGKTGHVQNYGTIEYWVRLQVPMDQAIIPYKQTSNFREHEQPSQKPTPRRRQRAAQADRRVSFLDLSTIQGARVVQEVQQPSDDQGKEVAEEIQQGKEELSHLSEQQLPEQTSAPADETEVIEELEPEDQDDRQEDDAVESIKTDSDDCIISSPVSTNIKQLNQSIYGNLEAEKIRIKITSLGLSESRITWDETIQQLFVECRLNNFLAEETPLSLPKPTGGQRIHYNYSTVINVDKAHNGAEREYLKSILLKPDLPADSLKFTVVSDPPEDEQDLECEDIGFAYVSLKEIFQKQRDIIEQEIDVFDSQDASAVIGKLTVTVEALQALWSVHEECRRD
SIO_010081: LOC116793898
subclass of: SO_0000673
so part of: LOC116793898
location: complement(join(1938482..1938585,1943058..1943191,1945563..1945647,1948837..1949020,1951861..1951985,1953086..1953254,1957263..1957346,1958873..1959000,1960148..1960600,1961784..1961901,1962545..1962724,1963596..1963646,1963862..1963968,1966110..1966249,1968060..1968133,1969388..1969534,1971342..1971447,1973318..1973462,1974509..1974606))
location: region:1938482-1974606:-1
so has part: feature:1974509-1974606:-1:exon
so has part: feature:1973318-1973462:-1:exon
so has part: feature:1971342-1971447:-1:exon
so has part: feature:1969388-1969534:-1:exon
so has part: feature:1968060-1968133:-1:exon
so has part: feature:1966110-1966249:-1:exon
so has part: feature:1963862-1963968:-1:exon
so has part: feature:1963596-1963646:-1:exon
so has part: feature:1962545-1962724:-1:exon
so has part: feature:1961784-1961901:-1:exon
so has part: feature:1960148-1960600:-1:exon
so has part: feature:1958873-1959000:-1:exon
so has part: feature:1957263-1957346:-1:exon
so has part: feature:1953086-1953254:-1:exon
so has part: feature:1951861-1951985:-1:exon
so has part: feature:1948837-1949020:-1:exon
so has part: feature:1945563-1945647:-1:exon
so has part: feature:1943058-1943191:-1:exon
so has part: feature:1938482-1938585:-1:exon

XP_032557991.1
type: Protein
SIO_000068: ncbiprotein

position:1938482:-1
position: 1938482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1974606:-1
position: 1974606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1974509-1974606:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1973318-1973462:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1971342-1971447:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1969388-1969534:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1968060-1968133:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1966110-1966249:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1963862-1963968:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1963596-1963646:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1962545-1962724:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1961784-1961901:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1960148-1960600:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1958873-1959000:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1957263-1957346:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1953086-1953254:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1951861-1951985:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1948837-1949020:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1945563-1945647:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1943058-1943191:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1938482-1938585:-1:exon

TRNAE-UUC
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: TRNAE-UUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1996044..1996115)
location: region:1996044-1996115:-1
so has part: feature:1996044-1996115:-1:exon
subclass of: SO_0000663

116794140
type: Gene
SIO_000068: ncbigene

position:1996044:-1
position: 1996044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1996115:-1
position: 1996115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1996044-1996115:-1:exon

TRNAE-UUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 296741
gene: TRNAE-UUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon UUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1996080..1996082),aa:Glu, seq:ttc)
SIO_010081: TRNAE-UUC
subclass of: SO_0000673
so part of: TRNAE-UUC
location: complement(1996044..1996115)
location: region:1996044-1996115:-1
so has part: feature:1996044-1996115:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1996044-1996115:-1:exon

LOC116793959
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793959
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1996412..2014313
location: region:1996412-2014313:1
so has part: feature:1996412-2014313:1:exon
subclass of: SO_0000010

116793959
type: Gene
SIO_000068: ncbigene

position:1996412:1
position: 1996412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2014313:1
position: 2014313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1996412-2014313:1:exon

LOC116793959
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116793959
product: ras-related GTP-binding protein A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_032702216.1
SIO_010081: LOC116793959
subclass of: SO_0000673
so part of: LOC116793959
location: join(1996412..1996650,1997207..1997240,1999069..1999168,2000259..2000325,2001070..2001292,2003314..2003409,2008696..2008818,2011184..2011275,2012068..2012183,2013826..2014313)
location: region:1996412-2014313:1
so has part: feature:1996412-1996650:1:exon
so has part: feature:1997207-1997240:1:exon
so has part: feature:1999069-1999168:1:exon
so has part: feature:2000259-2000325:1:exon
so has part: feature:2001070-2001292:1:exon
so has part: feature:2003314-2003409:1:exon
so has part: feature:2008696-2008818:1:exon
so has part: feature:2011184-2011275:1:exon
so has part: feature:2012068-2012183:1:exon
so has part: feature:2013826-2014313:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1996412-1996650:1:exon

position:1996650:1
position: 1996650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1997207-1997240:1:exon

position:1997207:1
position: 1997207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1997240:1
position: 1997240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1999069-1999168:1:exon

position:1999069:1
position: 1999069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1999168:1
position: 1999168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2000259-2000325:1:exon

position:2000259:1
position: 2000259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2000325:1
position: 2000325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2001070-2001292:1:exon

position:2001070:1
position: 2001070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2001292:1
position: 2001292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2003314-2003409:1:exon

position:2003314:1
position: 2003314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2003409:1
position: 2003409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2008696-2008818:1:exon

position:2008696:1
position: 2008696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2008818:1
position: 2008818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2011184-2011275:1:exon

position:2011184:1
position: 2011184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2011275:1
position: 2011275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2012068-2012183:1:exon

position:2012068:1
position: 2012068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2012183:1
position: 2012183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2013826-2014313:1:exon

position:2013826:1
position: 2013826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116793959
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116793959
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related GTP-binding protein A
translation: MPSTAMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQNSPDAKIFCLVHKMDLVQEDQRDLIFKEREEDLKRLSRPLECVCFRTSIWDETLYKAWSSIVYQLIPNVQQLEMNLRNFAQIIEADEVLLFERATFLVISHYQCKEQRDVHRFEKISNIIKQFKLSCSKLAASFQSMEVRNSNFAAFIDIFTSNTYVMVVMSDPSIPSAATLINIRNARKHFEKLERVDGPKHSLLMR
SIO_010081: LOC116793959
subclass of: SO_0000673
so part of: LOC116793959
location: join(1997214..1997240,1999069..1999168,2000259..2000325,2001070..2001292,2003314..2003409,2008696..2008818,2011184..2011275,2012068..2012183,2013826..2013923)
location: region:1997214-2013923:1
so has part: feature:1997214-1997240:1:exon
so has part: feature:1999069-1999168:1:exon
so has part: feature:2000259-2000325:1:exon
so has part: feature:2001070-2001292:1:exon
so has part: feature:2003314-2003409:1:exon
so has part: feature:2008696-2008818:1:exon
so has part: feature:2011184-2011275:1:exon
so has part: feature:2012068-2012183:1:exon
so has part: feature:2013826-2013923:1:exon

XP_032558107.1
type: Protein
SIO_000068: ncbiprotein

position:1997214:1
position: 1997214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2013923:1
position: 2013923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1997214-1997240:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1999069-1999168:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2000259-2000325:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2001070-2001292:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2003314-2003409:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2008696-2008818:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2011184-2011275:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2012068-2012183:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2013826-2013923:1:exon

KLF8
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: KLF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2019631..2026687
location: region:2019631-2026687:1
so has part: feature:2019631-2026687:1:exon
subclass of: SO_0000010

116793998
type: Gene
SIO_000068: ncbigene

position:2019631:1
position: 2019631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2026687:1
position: 2026687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2019631-2026687:1:exon

KLF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: KLF8
product: Kruppel like factor 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032702288.1
SIO_010081: KLF8
subclass of: SO_0000673
so part of: KLF8
location: join(2019631..2019640,2023567..2024110,2024676..2024802,2024892..2025043,2025748..2026687)
location: region:2019631-2026687:1
so has part: feature:2019631-2019640:1:exon
so has part: feature:2023567-2024110:1:exon
so has part: feature:2024676-2024802:1:exon
so has part: feature:2024892-2025043:1:exon
so has part: feature:2025748-2026687:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2019631-2019640:1:exon

position:2019640:1
position: 2019640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2023567-2024110:1:exon

position:2023567:1
position: 2023567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2024110:1
position: 2024110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2024676-2024802:1:exon

position:2024676:1
position: 2024676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2024802:1
position: 2024802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2024892-2025043:1:exon

position:2024892:1
position: 2024892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2025043:1
position: 2025043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2025748-2026687:1:exon

position:2025748:1
position: 2025748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KLF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: KLF8
product: Kruppel like factor 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 21 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032702289.1
SIO_010081: KLF8
subclass of: SO_0000673
so part of: KLF8
location: join(2022637..2022701,2023567..2024110,2024676..2024802,2024910..2025043,2025748..2026687)
location: region:2022637-2026687:1
so has part: feature:2022637-2022701:1:exon
so has part: feature:2023567-2024110:1:exon
so has part: feature:2024676-2024802:1:exon
so has part: feature:2024910-2025043:1:exon
so has part: feature:2025748-2026687:1:exon

position:2022637:1
position: 2022637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2022637-2022701:1:exon

position:2022701:1
position: 2022701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2023567-2024110:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2024676-2024802:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2024910-2025043:1:exon

position:2024910:1
position: 2024910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2025748-2026687:1:exon

KLF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: KLF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Krueppel-like factor 8 isoform X1
translation: MSSSALLAEGPLDPPVLLADIKTEPPEELLASDCSQPQAEPVDLSLNKSKVAPASAPPPPPPPSSVQSSPMLVAPPLPAPATVSIPPSGLSSTSAIPAVLSPGSILASTQGSGGQQILHVIHTIPSVNLPSKMGNLQTIPVVVQSLPVVYTTVPTDGVTAITVPLIGGDGKNAGSAFLSRTPPVKMDPGSVFPMDMNSDSEDSASESGPAPFQDLQRDPPSSRRPAVRGPRADSPDLKKRRIHQCDFEGCNKVYTKSSHLKAHRRIHTGEKPYKCTWEGCTWKFARSDELTRHFRKHTGIKPFRCSDCDRSFSRSDHLALHRRRHVMM
SIO_010081: KLF8
subclass of: SO_0000673
so part of: KLF8
location: join(2023585..2024110,2024676..2024802,2024892..2025043,2025748..2025929)
location: region:2023585-2025929:1
so has part: feature:2023585-2024110:1:exon
so has part: feature:2024676-2024802:1:exon
so has part: feature:2024892-2025043:1:exon
so has part: feature:2025748-2025929:1:exon

XP_032558179.1
type: Protein
SIO_000068: ncbiprotein

position:2023585:1
position: 2023585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2025929:1
position: 2025929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2023585-2024110:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2024676-2024802:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2024892-2025043:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2025748-2025929:1:exon

KLF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: KLF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Krueppel-like factor 8 isoform X2
translation: MSSSALLAEGPLDPPVLLADIKTEPPEELLASDCSQPQAEPVDLSLNKSKVAPASAPPPPPPPSSVQSSPMLVAPPLPAPATVSIPPSGLSSTSAIPAVLSPGSILASTQGSGGQQILHVIHTIPSVNLPSKMGNLQTIPVVVQSLPVVYTTVPTDGVTAITVPLIGGDGKNAGSAFLSRTPPVKMDPGSVFPMDMNSDSEDSASESGPAPFQDLQREPAVRGPRADSPDLKKRRIHQCDFEGCNKVYTKSSHLKAHRRIHTGEKPYKCTWEGCTWKFARSDELTRHFRKHTGIKPFRCSDCDRSFSRSDHLALHRRRHVMM
SIO_010081: KLF8
subclass of: SO_0000673
so part of: KLF8
location: join(2023585..2024110,2024676..2024802,2024910..2025043,2025748..2025929)
location: region:2023585-2025929:1
so has part: feature:2023585-2024110:1:exon
so has part: feature:2024676-2024802:1:exon
so has part: feature:2024910-2025043:1:exon
so has part: feature:2025748-2025929:1:exon

XP_032558180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2023585-2024110:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2024676-2024802:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2024910-2025043:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2025748-2025929:1:exon

LOC116793997
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793997
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2053800..2067440
location: region:2053800-2067440:1
so has part: feature:2053800-2067440:1:exon
subclass of: SO_0000010

116793997
type: Gene
SIO_000068: ncbigene

position:2053800:1
position: 2053800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2067440:1
position: 2067440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2053800-2067440:1:exon

LOC116793997
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116793997
product: Krueppel-like factor 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032702284.1
SIO_010081: LOC116793997
subclass of: SO_0000673
so part of: LOC116793997
location: join(2053800..2053840,2057584..2058484,2061506..2061565,2066562..2067440)
location: region:2053800-2067440:1
so has part: feature:2053800-2053840:1:exon
so has part: feature:2057584-2058484:1:exon
so has part: feature:2061506-2061565:1:exon
so has part: feature:2066562-2067440:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2053800-2053840:1:exon

position:2053840:1
position: 2053840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2057584-2058484:1:exon

position:2057584:1
position: 2057584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2058484:1
position: 2058484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2061506-2061565:1:exon

position:2061506:1
position: 2061506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2061565:1
position: 2061565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2066562-2067440:1:exon

position:2066562:1
position: 2066562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116793997
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116793997
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Krueppel-like factor 5 isoform X1
translation: MRMDQRMPPLILEARSEMDKYLSSEVPPIPMLPDKKYRRESASVVDEFFSTEKPSSTPYSVNINVILPDTTHLRTGLYRPPKPMAPFPQIKTEPGTAFAQPCSSAPGPTQTLPDFTSVFSMPQSVAVNNIFIKQEMPSEVPLSAPPQPSQLYQLPLGGGADVPALTSSGSTTTAVSCLGGVTMATGSTMASVGHRPVPPAGPLKQYPHVSQGQGSFNISGQFYPAPGVTLPPSPPNSQPGSPENQPELINTISPPPSYEATFGLKLVQSSQVPPVPNGAGTLSQGHIVMQPPKYNRRNNPELEKRRIHHCDYPGCSKVYTKSSHLKAHQRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFKCLACGRCFSRSDHLALHMKRHQN
SIO_010081: LOC116793997
subclass of: SO_0000673
so part of: LOC116793997
location: join(2053802..2053840,2057584..2058484,2061506..2061565,2066562..2066740)
location: region:2053802-2066740:1
so has part: feature:2053802-2053840:1:exon
so has part: feature:2057584-2058484:1:exon
so has part: feature:2061506-2061565:1:exon
so has part: feature:2066562-2066740:1:exon

XP_032558175.1
type: Protein
SIO_000068: ncbiprotein

position:2053802:1
position: 2053802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2066740:1
position: 2066740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2053802-2053840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2057584-2058484:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2061506-2061565:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2066562-2066740:1:exon

LOC116793997
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116793997
product: Krueppel-like factor 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032702286.1
SIO_010081: LOC116793997
subclass of: SO_0000673
so part of: LOC116793997
location: join(2054798..2054970,2057584..2058484,2061506..2061565,2066562..2067440)
location: region:2054798-2067440:1
so has part: feature:2054798-2054970:1:exon
so has part: feature:2057584-2058484:1:exon
so has part: feature:2061506-2061565:1:exon
so has part: feature:2066562-2067440:1:exon

position:2054798:1
position: 2054798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2054798-2054970:1:exon

position:2054970:1
position: 2054970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2057584-2058484:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2061506-2061565:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2066562-2067440:1:exon

LOC116793997
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116793997
product: Krueppel-like factor 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032702287.1
SIO_010081: LOC116793997
subclass of: SO_0000673
so part of: LOC116793997
location: join(2055206..2055301,2057584..2058484,2061506..2061565,2066562..2067440)
location: region:2055206-2067440:1
so has part: feature:2055206-2055301:1:exon
so has part: feature:2057584-2058484:1:exon
so has part: feature:2061506-2061565:1:exon
so has part: feature:2066562-2067440:1:exon

position:2055206:1
position: 2055206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2055206-2055301:1:exon

position:2055301:1
position: 2055301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2057584-2058484:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2061506-2061565:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2066562-2067440:1:exon

LOC116793997
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116793997
product: Krueppel-like factor 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032702285.1
SIO_010081: LOC116793997
subclass of: SO_0000673
so part of: LOC116793997
location: join(2057132..2057188,2057584..2058484,2061506..2061565,2066562..2067440)
location: region:2057132-2067440:1
so has part: feature:2057132-2057188:1:exon
so has part: feature:2057584-2058484:1:exon
so has part: feature:2061506-2061565:1:exon
so has part: feature:2066562-2067440:1:exon

position:2057132:1
position: 2057132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2057132-2057188:1:exon

position:2057188:1
position: 2057188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2057584-2058484:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2061506-2061565:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2066562-2067440:1:exon

LOC116793997
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116793997
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Krueppel-like factor 5 isoform X2
translation: MSKVHCKSNMPKARSEMDKYLSSEVPPIPMLPDKKYRRESASVVDEFFSTEKPSSTPYSVNINVILPDTTHLRTGLYRPPKPMAPFPQIKTEPGTAFAQPCSSAPGPTQTLPDFTSVFSMPQSVAVNNIFIKQEMPSEVPLSAPPQPSQLYQLPLGGGADVPALTSSGSTTTAVSCLGGVTMATGSTMASVGHRPVPPAGPLKQYPHVSQGQGSFNISGQFYPAPGVTLPPSPPNSQPGSPENQPELINTISPPPSYEATFGLKLVQSSQVPPVPNGAGTLSQGHIVMQPPKYNRRNNPELEKRRIHHCDYPGCSKVYTKSSHLKAHQRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFKCLACGRCFSRSDHLALHMKRHQN
SIO_010081: LOC116793997
subclass of: SO_0000673
so part of: LOC116793997
location: join(2057153..2057188,2057584..2058484,2061506..2061565,2066562..2066740)
location: region:2057153-2066740:1
so has part: feature:2057153-2057188:1:exon
so has part: feature:2057584-2058484:1:exon
so has part: feature:2061506-2061565:1:exon
so has part: feature:2066562-2066740:1:exon

XP_032558176.1
type: Protein
SIO_000068: ncbiprotein

position:2057153:1
position: 2057153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2057153-2057188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2057584-2058484:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2061506-2061565:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2066562-2066740:1:exon

LOC116793997
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116793997
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Krueppel-like factor 5 isoform X3
translation: MDKYLSSEVPPIPMLPDKKYRRESASVVDEFFSTEKPSSTPYSVNINVILPDTTHLRTGLYRPPKPMAPFPQIKTEPGTAFAQPCSSAPGPTQTLPDFTSVFSMPQSVAVNNIFIKQEMPSEVPLSAPPQPSQLYQLPLGGGADVPALTSSGSTTTAVSCLGGVTMATGSTMASVGHRPVPPAGPLKQYPHVSQGQGSFNISGQFYPAPGVTLPPSPPNSQPGSPENQPELINTISPPPSYEATFGLKLVQSSQVPPVPNGAGTLSQGHIVMQPPKYNRRNNPELEKRRIHHCDYPGCSKVYTKSSHLKAHQRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFKCLACGRCFSRSDHLALHMKRHQN
SIO_010081: LOC116793997
subclass of: SO_0000673
so part of: LOC116793997
location: join(2057596..2058484,2061506..2061565,2066562..2066740)
location: region:2057596-2066740:1
so has part: feature:2057596-2058484:1:exon
so has part: feature:2061506-2061565:1:exon
so has part: feature:2066562-2066740:1:exon

XP_032558177.1
type: Protein
SIO_000068: ncbiprotein

position:2057596:1
position: 2057596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2057596-2058484:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2061506-2061565:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2066562-2066740:1:exon

LOC116793997
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116793997
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Krueppel-like factor 5 isoform X3
translation: MDKYLSSEVPPIPMLPDKKYRRESASVVDEFFSTEKPSSTPYSVNINVILPDTTHLRTGLYRPPKPMAPFPQIKTEPGTAFAQPCSSAPGPTQTLPDFTSVFSMPQSVAVNNIFIKQEMPSEVPLSAPPQPSQLYQLPLGGGADVPALTSSGSTTTAVSCLGGVTMATGSTMASVGHRPVPPAGPLKQYPHVSQGQGSFNISGQFYPAPGVTLPPSPPNSQPGSPENQPELINTISPPPSYEATFGLKLVQSSQVPPVPNGAGTLSQGHIVMQPPKYNRRNNPELEKRRIHHCDYPGCSKVYTKSSHLKAHQRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFKCLACGRCFSRSDHLALHMKRHQN
SIO_010081: LOC116793997
subclass of: SO_0000673
so part of: LOC116793997
location: join(2057596..2058484,2061506..2061565,2066562..2066740)
location: region:2057596-2066740:1
so has part: feature:2057596-2058484:1:exon
so has part: feature:2061506-2061565:1:exon
so has part: feature:2066562-2066740:1:exon

XP_032558178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2057596-2058484:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2061506-2061565:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2066562-2066740:1:exon

LOC116794062
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794062
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2145935..2149634)
location: region:2145935-2149634:-1
so has part: feature:2145935-2149634:-1:exon
subclass of: SO_0000010

116794062
type: Gene
SIO_000068: ncbigene

position:2145935:-1
position: 2145935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2149634:-1
position: 2149634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2145935-2149634:-1:exon

LOC116794062
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794062
product: BTB/POZ domain-containing protein KCTD12-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032702390.1
SIO_010081: LOC116794062
subclass of: SO_0000673
so part of: LOC116794062
location: complement(join(2145935..2147846,2149542..2149634))
location: region:2145935-2149634:-1
so has part: feature:2149542-2149634:-1:exon
so has part: feature:2145935-2147846:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2149542-2149634:-1:exon

position:2149542:-1
position: 2149542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2145935-2147846:-1:exon

position:2147846:-1
position: 2147846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116794062
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794062
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD12-like
translation: MALADGAGCANPGEDNPFPDIIELNVGGQVYITRHPTLVSVPGSLLWEMFTQKNVRSLARDSKGRFFVDRDGFLFRYILDYMRDQQLVLPEHFPERSRLQREAEYFMLPELVKMLAPKLSKQNSLGEDPCQSDPEELSPGADAARALSSAGTALPGTTAAGTAGTEGRRAGFITIGYRGSYTLGRDSQTDAKFRRVARIMVCGKTSLAKEVFGDTLNESRDPDRPPERYTSRYYLKFTFLEQAFDKLADAGFHMVACNSTGTCAFAHDQTDDRIWTSYTEYVFYRE
SIO_010081: LOC116794062
subclass of: SO_0000673
so part of: LOC116794062
location: complement(2146962..2147822)
location: region:2146962-2147822:-1
so has part: feature:2146962-2147822:-1:exon

XP_032558281.1
type: Protein
SIO_000068: ncbiprotein

position:2146962:-1
position: 2146962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2147822:-1
position: 2147822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2146962-2147822:-1:exon

LOC116793826
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2171067..2198614
location: region:2171067-2198614:1
so has part: feature:2171067-2198614:1:exon
subclass of: SO_0000010

116793826
type: Gene
SIO_000068: ncbigene

position:2171067:1
position: 2171067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2198614:1
position: 2198614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2171067-2198614:1:exon

LOC116793826
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116793826
product: exocyst complex component 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032701976.1
SIO_010081: LOC116793826
subclass of: SO_0000673
so part of: LOC116793826
location: join(2171067..2171148,2172360..2172541,2173807..2173925,2178350..2178509,2179416..2179609,2182736..2182963,2183801..2183933,2186693..2186802,2187821..2187970,2188251..2188344,2192743..2192855,2193042..2193152,2193682..2193752,2193863..2194103,2194792..2194975,2196067..2196266,2197948..2198142,2198254..2198614)
location: region:2171067-2198614:1
so has part: feature:2171067-2171148:1:exon
so has part: feature:2172360-2172541:1:exon
so has part: feature:2173807-2173925:1:exon
so has part: feature:2178350-2178509:1:exon
so has part: feature:2179416-2179609:1:exon
so has part: feature:2182736-2182963:1:exon
so has part: feature:2183801-2183933:1:exon
so has part: feature:2186693-2186802:1:exon
so has part: feature:2187821-2187970:1:exon
so has part: feature:2188251-2188344:1:exon
so has part: feature:2192743-2192855:1:exon
so has part: feature:2193042-2193152:1:exon
so has part: feature:2193682-2193752:1:exon
so has part: feature:2193863-2194103:1:exon
so has part: feature:2194792-2194975:1:exon
so has part: feature:2196067-2196266:1:exon
so has part: feature:2197948-2198142:1:exon
so has part: feature:2198254-2198614:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2171067-2171148:1:exon

position:2171148:1
position: 2171148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2172360-2172541:1:exon

position:2172360:1
position: 2172360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2172541:1
position: 2172541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2173807-2173925:1:exon

position:2173807:1
position: 2173807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2173925:1
position: 2173925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2178350-2178509:1:exon

position:2178350:1
position: 2178350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2178509:1
position: 2178509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2179416-2179609:1:exon

position:2179416:1
position: 2179416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2179609:1
position: 2179609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2182736-2182963:1:exon

position:2182736:1
position: 2182736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2182963:1
position: 2182963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2183801-2183933:1:exon

position:2183801:1
position: 2183801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2183933:1
position: 2183933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2186693-2186802:1:exon

position:2186693:1
position: 2186693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2186802:1
position: 2186802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2187821-2187970:1:exon

position:2187821:1
position: 2187821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2187970:1
position: 2187970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2188251-2188344:1:exon

position:2188251:1
position: 2188251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2188344:1
position: 2188344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2192743-2192855:1:exon

position:2192743:1
position: 2192743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2192855:1
position: 2192855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2193042-2193152:1:exon

position:2193042:1
position: 2193042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2193152:1
position: 2193152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2193682-2193752:1:exon

position:2193682:1
position: 2193682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2193752:1
position: 2193752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2193863-2194103:1:exon

position:2193863:1
position: 2193863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2194103:1
position: 2194103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2194792-2194975:1:exon

position:2194792:1
position: 2194792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2194975:1
position: 2194975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2196067-2196266:1:exon

position:2196067:1
position: 2196067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2196266:1
position: 2196266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2197948-2198142:1:exon

position:2197948:1
position: 2197948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2198142:1
position: 2198142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2198254-2198614:1:exon

position:2198254:1
position: 2198254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116793826
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116793826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exocyst complex component 1-like
translation: MASLWISLEKDLFNPQKKRLLETIRVWKTGKKKKMSILCVVVDTWRPMQPCLVQVRAEPLRTRRWWPLAELRLVDGKSLQQASLDFDLQFDKVYKWTTSSFEEKKTFLRCLWKLSHRFLGRAVTFVNVPSCALEGMPRPQEDEKDPEEAENHEGLSCYQEMTPKEAADVLKVLEEHEPLVSNSVAFAEQLSRELHVLDEANLQAIISSEQEVTQLMSSIDEALAEVARVEETLQVYDELLGSVKQQMDHIHRENSLLHRMVSNRSKLMDELLFLTTRLDLSKEHWDVLSRADLSSPAGVRSCSAAAEALSACMNTPLQPGSRKLQAVAEQLILFETLKQNFENSLISHITNIFQLQGSSQVPALGQPVDKLSAPSHGLHHEELLPYTPLMAWLRNSSPALFCDLPKVYAQNLGRLYEREIRAFFEQAKTSLLGRRKGSLQESPEKPLGNRHQPRWSLPGSRESQEEPPARGNVVKVLEQVLRQLQPLCTSEQRFLQEFFQLSHDTVDLQGLEASATKGGETLAPAEDPPCTKRRSQPEEPTTHLLSEIFSCLELELRGFLDVCNKVHPFGCLQVLVTLSDSVFGMWGSSSAPPSSFLNTVLGNVLLLAKSSFNKCIGTLCKEIEEAKVPSRMKGGILPSVSRFQEFVDFSEEVFRTAQRRGELDKAHLRLAGSVFSSINSLSSANLKVNIHMAMMENFHHIYCFLCQKKIPCLEDKKREAKQRYSEHMEKYVLKCLDQPLEKLHHFFEGVKARLAQGVKEEELSFQLAYSKQELRKVLEKYPGKEVRRALETLYRKIHKDLSPEENLLPVVWHAMEQEFICQYQEFEDLIRRCYAGSGIAMDFTVEDLLSYFSSITLSNM
SIO_010081: LOC116793826
subclass of: SO_0000673
so part of: LOC116793826
location: join(2172418..2172541,2173807..2173925,2178350..2178509,2179416..2179609,2182736..2182963,2183801..2183933,2186693..2186802,2187821..2187970,2188251..2188344,2192743..2192855,2193042..2193152,2193682..2193752,2193863..2194103,2194792..2194975,2196067..2196266,2197948..2198142,2198254..2198409)
location: region:2172418-2198409:1
so has part: feature:2172418-2172541:1:exon
so has part: feature:2173807-2173925:1:exon
so has part: feature:2178350-2178509:1:exon
so has part: feature:2179416-2179609:1:exon
so has part: feature:2182736-2182963:1:exon
so has part: feature:2183801-2183933:1:exon
so has part: feature:2186693-2186802:1:exon
so has part: feature:2187821-2187970:1:exon
so has part: feature:2188251-2188344:1:exon
so has part: feature:2192743-2192855:1:exon
so has part: feature:2193042-2193152:1:exon
so has part: feature:2193682-2193752:1:exon
so has part: feature:2193863-2194103:1:exon
so has part: feature:2194792-2194975:1:exon
so has part: feature:2196067-2196266:1:exon
so has part: feature:2197948-2198142:1:exon
so has part: feature:2198254-2198409:1:exon

XP_032557867.1
type: Protein
SIO_000068: ncbiprotein

position:2172418:1
position: 2172418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2198409:1
position: 2198409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2172418-2172541:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2173807-2173925:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2178350-2178509:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2179416-2179609:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2182736-2182963:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2183801-2183933:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2186693-2186802:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2187821-2187970:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2188251-2188344:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2192743-2192855:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2193042-2193152:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2193682-2193752:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2193863-2194103:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2194792-2194975:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2196067-2196266:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2197948-2198142:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2198254-2198409:1:exon

GLOD5
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: GLOD5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2199473..2203188
location: region:2199473-2203188:1
so has part: feature:2199473-2203188:1:exon
subclass of: SO_0000010

116794085
type: Gene
SIO_000068: ncbigene

position:2199473:1
position: 2199473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2203188:1
position: 2203188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2199473-2203188:1:exon

GLOD5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: GLOD5
product: glyoxalase domain containing 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032702425.1
SIO_010081: GLOD5
subclass of: SO_0000673
so part of: GLOD5
location: join(2199473..2199604,2200713..2200878,2201853..2202008,2202219..2203188)
location: region:2199473-2203188:1
so has part: feature:2199473-2199604:1:exon
so has part: feature:2200713-2200878:1:exon
so has part: feature:2201853-2202008:1:exon
so has part: feature:2202219-2203188:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2199473-2199604:1:exon

position:2199604:1
position: 2199604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2200713-2200878:1:exon

position:2200713:1
position: 2200713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2200878:1
position: 2200878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2201853-2202008:1:exon

position:2201853:1
position: 2201853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2202008:1
position: 2202008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2202219-2203188:1:exon

position:2202219:1
position: 2202219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GLOD5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: GLOD5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glyoxalase domain-containing protein 5
translation: MSWKEEECVSPPSCFIQRLDHLVLTVKSIEDTVAFYSKVLGMEVVTFKGDRKALRFGNQKFNLHEVGKEFEPKARHPVPGSADLCLVTQVPLEQLLDHLKACGVVVEEGPVARTGAVGPITSIYFRDPDENLIEVSRY
SIO_010081: GLOD5
subclass of: SO_0000673
so part of: GLOD5
location: join(2200735..2200878,2201853..2202008,2202219..2202335)
location: region:2200735-2202335:1
so has part: feature:2200735-2200878:1:exon
so has part: feature:2201853-2202008:1:exon
so has part: feature:2202219-2202335:1:exon

XP_032558316.1
type: Protein
SIO_000068: ncbiprotein

position:2200735:1
position: 2200735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2202335:1
position: 2202335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2200735-2200878:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2201853-2202008:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2202219-2202335:1:exon

LOC116794066
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794066
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2207188..2219865)
location: region:2207188-2219865:-1
so has part: feature:2207188-2219865:-1:exon
subclass of: SO_0000010

116794066
type: Gene
SIO_000068: ncbigene

position:2207188:-1
position: 2207188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2219865:-1
position: 2219865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2207188-2219865:-1:exon

LOC116794066
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794066
product: cis-aconitate decarboxylase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032702398.1
SIO_010081: LOC116794066
subclass of: SO_0000673
so part of: LOC116794066
location: complement(join(2207188..2208611,2209237..2209442,2209691..2209780,2210436..2210623,2213292..2213346,2214289..2219865))
location: region:2207188-2219865:-1
so has part: feature:2214289-2219865:-1:exon
so has part: feature:2213292-2213346:-1:exon
so has part: feature:2210436-2210623:-1:exon
so has part: feature:2209691-2209780:-1:exon
so has part: feature:2209237-2209442:-1:exon
so has part: feature:2207188-2208611:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2214289-2219865:-1:exon

position:2214289:-1
position: 2214289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2213292-2213346:-1:exon

position:2213292:-1
position: 2213292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2213346:-1
position: 2213346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2210436-2210623:-1:exon

position:2210436:-1
position: 2210436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2210623:-1
position: 2210623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2209691-2209780:-1:exon

position:2209691:-1
position: 2209691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2209780:-1
position: 2209780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2209237-2209442:-1:exon

position:2209237:-1
position: 2209237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2209442:-1
position: 2209442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2207188-2208611:-1:exon

position:2208611:-1
position: 2208611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116794066
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794066
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cis-aconitate decarboxylase-like
translation: MGGCSCPSHFLKSQKLLASSRHVHKTAAHVVARSAPEDTVTSSFASFIHGARPDHLSKTVRHRSKRMILDSIGVGLVGSTTHVFDIALRYCRLYSPVAVSSVYGKPGVKLSPTLAAFTNGVATHSMDFDDTWHPATHPSGAVLPALLAASQMLPPGTKPTGMDFLLAFNVGLEVQGRLMHFSTEAHDIPKRFHPPSVVGTMGSAAATAKLLSLSRAQCCHALGIAASLAGAPMANAATQAKPLHIGNATRLGFEAALLAARGMEANPFILDDIPGCSGFSAFYGVYHPKPLPAPGDHHEFLLEKQDIAFKRFPAHLGMHWVVDAALSVRNLFVHYAGSFSPALIRTIVLKIPVSKYINRPFPSSEHQARHSFQFNACAALLDGEVGLGSFTESSIHRQELRELLDKVVVEHPEDNVANFDKMYGEVALLLHSGDVLTGKCDTFYGHWRKPLSKESLLKKFRSNASHVLPDEKIEAIITTVDNLENLSDSSQLACSL
SIO_010081: LOC116794066
subclass of: SO_0000673
so part of: LOC116794066
location: complement(join(2207693..2208611,2209237..2209442,2209691..2209780,2210436..2210623,2213292..2213346,2214289..2214321))
location: region:2207693-2214321:-1
so has part: feature:2214289-2214321:-1:exon
so has part: feature:2213292-2213346:-1:exon
so has part: feature:2210436-2210623:-1:exon
so has part: feature:2209691-2209780:-1:exon
so has part: feature:2209237-2209442:-1:exon
so has part: feature:2207693-2208611:-1:exon

XP_032558289.1
type: Protein
SIO_000068: ncbiprotein

position:2207693:-1
position: 2207693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2214321:-1
position: 2214321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2214289-2214321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2213292-2213346:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2210436-2210623:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2209691-2209780:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2209237-2209442:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2207693-2208611:-1:exon

LOC116794065
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116794065
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2214258..2227232
location: region:2214258-2227232:1
so has part: feature:2214258-2227232:1:exon
subclass of: SO_0000010

116794065
type: Gene
SIO_000068: ncbigene

position:2214258:1
position: 2214258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2227232:1
position: 2227232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2214258-2227232:1:exon

LOC116794065
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794065
product: uncharacterized LOC116794065, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032702395.1
SIO_010081: LOC116794065
subclass of: SO_0000673
so part of: LOC116794065
location: join(2214258..2214345,2217615..2217986,2218416..2219870,2220677..2220769,2221341..2221445,2222035..2222144,2223004..2223198,2224739..2224901,2225738..2225903,2226048..2226142,2226766..2227232)
location: region:2214258-2227232:1
so has part: feature:2214258-2214345:1:exon
so has part: feature:2217615-2217986:1:exon
so has part: feature:2218416-2219870:1:exon
so has part: feature:2220677-2220769:1:exon
so has part: feature:2221341-2221445:1:exon
so has part: feature:2222035-2222144:1:exon
so has part: feature:2223004-2223198:1:exon
so has part: feature:2224739-2224901:1:exon
so has part: feature:2225738-2225903:1:exon
so has part: feature:2226048-2226142:1:exon
so has part: feature:2226766-2227232:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2214258-2214345:1:exon

position:2214345:1
position: 2214345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2217615-2217986:1:exon

position:2217615:1
position: 2217615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2217986:1
position: 2217986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2218416-2219870:1:exon

position:2218416:1
position: 2218416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2219870:1
position: 2219870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2220677-2220769:1:exon

position:2220677:1
position: 2220677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2220769:1
position: 2220769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2221341-2221445:1:exon

position:2221341:1
position: 2221341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2221445:1
position: 2221445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2222035-2222144:1:exon

position:2222035:1
position: 2222035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2222144:1
position: 2222144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2223004-2223198:1:exon

position:2223004:1
position: 2223004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2223198:1
position: 2223198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2224739-2224901:1:exon

position:2224739:1
position: 2224739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2224901:1
position: 2224901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2225738-2225903:1:exon

position:2225738:1
position: 2225738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2225903:1
position: 2225903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2226048-2226142:1:exon

position:2226048:1
position: 2226048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2226142:1
position: 2226142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2226766-2227232:1:exon

position:2226766:1
position: 2226766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116794065
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794065
product: uncharacterized LOC116794065, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032702394.1
SIO_010081: LOC116794065
subclass of: SO_0000673
so part of: LOC116794065
location: join(2217374..2217986,2218416..2219870,2220677..2220769,2221341..2221445,2222035..2222144,2223004..2223198,2224739..2224901,2225738..2225903,2226048..2226142,2226766..2227232)
location: region:2217374-2227232:1
so has part: feature:2217374-2217986:1:exon
so has part: feature:2218416-2219870:1:exon
so has part: feature:2220677-2220769:1:exon
so has part: feature:2221341-2221445:1:exon
so has part: feature:2222035-2222144:1:exon
so has part: feature:2223004-2223198:1:exon
so has part: feature:2224739-2224901:1:exon
so has part: feature:2225738-2225903:1:exon
so has part: feature:2226048-2226142:1:exon
so has part: feature:2226766-2227232:1:exon

position:2217374:1
position: 2217374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2217374-2217986:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2218416-2219870:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2220677-2220769:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2221341-2221445:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2222035-2222144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2223004-2223198:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2224739-2224901:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2225738-2225903:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2226048-2226142:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2226766-2227232:1:exon

LOC116794065
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794065
product: uncharacterized LOC116794065, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032702397.1
SIO_010081: LOC116794065
subclass of: SO_0000673
so part of: LOC116794065
location: join(2217374..2217986,2218416..2219870,2220677..2220769,2221341..2221445,2222035..2222144,2224739..2224901,2225738..2225903,2226048..2226142,2226766..2227232)
location: region:2217374-2227232:1
so has part: feature:2217374-2217986:1:exon
so has part: feature:2218416-2219870:1:exon
so has part: feature:2220677-2220769:1:exon
so has part: feature:2221341-2221445:1:exon
so has part: feature:2222035-2222144:1:exon
so has part: feature:2224739-2224901:1:exon
so has part: feature:2225738-2225903:1:exon
so has part: feature:2226048-2226142:1:exon
so has part: feature:2226766-2227232:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2217374-2217986:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2218416-2219870:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2220677-2220769:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2221341-2221445:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2222035-2222144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2224739-2224901:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2225738-2225903:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2226048-2226142:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2226766-2227232:1:exon

LOC116794065
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116794065
product: uncharacterized LOC116794065, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032702396.1
SIO_010081: LOC116794065
subclass of: SO_0000673
so part of: LOC116794065
location: join(2217374..2217986,2218416..2219870,2221341..2221445,2222035..2222144,2223004..2223198,2224739..2224901,2225738..2225903,2226048..2226142,2226766..2227232)
location: region:2217374-2227232:1
so has part: feature:2217374-2217986:1:exon
so has part: feature:2218416-2219870:1:exon
so has part: feature:2221341-2221445:1:exon
so has part: feature:2222035-2222144:1:exon
so has part: feature:2223004-2223198:1:exon
so has part: feature:2224739-2224901:1:exon
so has part: feature:2225738-2225903:1:exon
so has part: feature:2226048-2226142:1:exon
so has part: feature:2226766-2227232:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2217374-2217986:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2218416-2219870:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2221341-2221445:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2222035-2222144:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2223004-2223198:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2224739-2224901:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2225738-2225903:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2226048-2226142:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2226766-2227232:1:exon

LOC116794065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794065
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116794065 isoform X1
translation: MAGFAAVFYSEPAVLGLLGNVVSAFLLCLQNFTVAQSGLRPRGAEDILAGVHLVLIGGFVQLLAGFLAFRKYDHLGGAAFLTFSALWSSYGATRIVSAAYPSPQNTTLPAGNGSHLLPLGAAQLSASQSAVAGLVAYISISFVLCFCSATVNYIMPFIFGAIALALVFEAVALFCQWALVVSGAIELVIVTCGLYGAVALLLKGITQRYVLPGFGHPLFNVLLLGSAQKSSSKAIGEEKKKNTKYAEPMTLGNICDTVSPFIFAFYFFGYMKTFCVGAVWISIISSCQLLSSFYSYLRGDAYHTTKFGVHSLYWLVMSWEEFILTAFLGLPRAQESRLGMFGGWFFLATACTLFLMSTHKDTLEMLQNASFVILTTAFIHQIPLPGAQPLLGTACSLCTALSLYATFASLINSIGEKALIPVGAQAVSSSALQTALVALKALLMSTEELPGGTGAAVPDALFYVCNGLAAASAIQGGLGDPGRQQLSIPSVLIPGAVGQLYVCRIQAWGGRRFGSVLPFCYAAFWAAWAWLRLAGHLLNIGAGNTEGFTAGSVAFLVLNAFLIILASSFNVVLLCVTLAMELLSICFLLFTLENLPLPFEIVVLSIFSILCFYGATASLANCMFGKDLLMMGPPLFTAGSSKKDTQDPPPCVCPQSHCTSGLRTIAELLNTGAVCGVPTDTVYALAASCKHPQAIEKVYRIKDRPQEKPICIFISNLDQLRAAAPPISPLLWEFMENVYPGGVGCIIQKGEWLKKLGVGAGYSRVGTQDSIMIRVPDLTVLVHLIDMTGPLAITSANPSGEVDSTHHDMVISRLGHKLEGVLCDGESDEVVASTVVNCTKIDESGITIVREGCIPAGKVMQIFERVKNRVL
SIO_010081: LOC116794065
subclass of: SO_0000673
so part of: LOC116794065
location: join(2217839..2217986,2218416..2219870,2220677..2220769,2221341..2221445,2222035..2222144,2223004..2223198,2224739..2224901,2225738..2225903,2226048..2226142,2226766..2226851)
location: region:2217839-2226851:1
so has part: feature:2217839-2217986:1:exon
so has part: feature:2218416-2219870:1:exon
so has part: feature:2220677-2220769:1:exon
so has part: feature:2221341-2221445:1:exon
so has part: feature:2222035-2222144:1:exon
so has part: feature:2223004-2223198:1:exon
so has part: feature:2224739-2224901:1:exon
so has part: feature:2225738-2225903:1:exon
so has part: feature:2226048-2226142:1:exon
so has part: feature:2226766-2226851:1:exon

XP_032558285.1
type: Protein
SIO_000068: ncbiprotein

position:2217839:1
position: 2217839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2226851:1
position: 2226851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2217839-2217986:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2218416-2219870:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2220677-2220769:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2221341-2221445:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2222035-2222144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2223004-2223198:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2224739-2224901:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2225738-2225903:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2226048-2226142:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2226766-2226851:1:exon

LOC116794065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794065
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116794065 isoform X1
translation: MAGFAAVFYSEPAVLGLLGNVVSAFLLCLQNFTVAQSGLRPRGAEDILAGVHLVLIGGFVQLLAGFLAFRKYDHLGGAAFLTFSALWSSYGATRIVSAAYPSPQNTTLPAGNGSHLLPLGAAQLSASQSAVAGLVAYISISFVLCFCSATVNYIMPFIFGAIALALVFEAVALFCQWALVVSGAIELVIVTCGLYGAVALLLKGITQRYVLPGFGHPLFNVLLLGSAQKSSSKAIGEEKKKNTKYAEPMTLGNICDTVSPFIFAFYFFGYMKTFCVGAVWISIISSCQLLSSFYSYLRGDAYHTTKFGVHSLYWLVMSWEEFILTAFLGLPRAQESRLGMFGGWFFLATACTLFLMSTHKDTLEMLQNASFVILTTAFIHQIPLPGAQPLLGTACSLCTALSLYATFASLINSIGEKALIPVGAQAVSSSALQTALVALKALLMSTEELPGGTGAAVPDALFYVCNGLAAASAIQGGLGDPGRQQLSIPSVLIPGAVGQLYVCRIQAWGGRRFGSVLPFCYAAFWAAWAWLRLAGHLLNIGAGNTEGFTAGSVAFLVLNAFLIILASSFNVVLLCVTLAMELLSICFLLFTLENLPLPFEIVVLSIFSILCFYGATASLANCMFGKDLLMMGPPLFTAGSSKKDTQDPPPCVCPQSHCTSGLRTIAELLNTGAVCGVPTDTVYALAASCKHPQAIEKVYRIKDRPQEKPICIFISNLDQLRAAAPPISPLLWEFMENVYPGGVGCIIQKGEWLKKLGVGAGYSRVGTQDSIMIRVPDLTVLVHLIDMTGPLAITSANPSGEVDSTHHDMVISRLGHKLEGVLCDGESDEVVASTVVNCTKIDESGITIVREGCIPAGKVMQIFERVKNRVL
SIO_010081: LOC116794065
subclass of: SO_0000673
so part of: LOC116794065
location: join(2217839..2217986,2218416..2219870,2220677..2220769,2221341..2221445,2222035..2222144,2223004..2223198,2224739..2224901,2225738..2225903,2226048..2226142,2226766..2226851)
location: region:2217839-2226851:1
so has part: feature:2217839-2217986:1:exon
so has part: feature:2218416-2219870:1:exon
so has part: feature:2220677-2220769:1:exon
so has part: feature:2221341-2221445:1:exon
so has part: feature:2222035-2222144:1:exon
so has part: feature:2223004-2223198:1:exon
so has part: feature:2224739-2224901:1:exon
so has part: feature:2225738-2225903:1:exon
so has part: feature:2226048-2226142:1:exon
so has part: feature:2226766-2226851:1:exon

XP_032558286.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2217839-2217986:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2218416-2219870:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2220677-2220769:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2221341-2221445:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2222035-2222144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2223004-2223198:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2224739-2224901:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2225738-2225903:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2226048-2226142:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2226766-2226851:1:exon

LOC116794065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794065
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116794065 isoform X3
translation: MAGFAAVFYSEPAVLGLLGNVVSAFLLCLQNFTVAQSGLRPRGAEDILAGVHLVLIGGFVQLLAGFLAFRKYDHLGGAAFLTFSALWSSYGATRIVSAAYPSPQNTTLPAGNGSHLLPLGAAQLSASQSAVAGLVAYISISFVLCFCSATVNYIMPFIFGAIALALVFEAVALFCQWALVVSGAIELVIVTCGLYGAVALLLKGITQRYVLPGFGHPLFNVLLLGSAQKSSSKAIGEEKKKNTKYAEPMTLGNICDTVSPFIFAFYFFGYMKTFCVGAVWISIISSCQLLSSFYSYLRGDAYHTTKFGVHSLYWLVMSWEEFILTAFLGLPRAQESRLGMFGGWFFLATACTLFLMSTHKDTLEMLQNASFVILTTAFIHQIPLPGAQPLLGTACSLCTALSLYATFASLINSIGEKALIPVGAQAVSSSALQTALVALKALLMSTEELPGGTGAAVPDALFYVCNGLAAASAIQGGLGDPGRQQLSIPSVLIPGAVGQLYVCRIQAWGGRRFGSVLPFCYAAFWAAWAWLRLAGHLLNIGAGNTEGFTAGSVAFLVLNAFLIILASSFNVVLLCVTLAMELLSICFLLFTLENLPLPFEIVVLSIFSILCFYGATASLANCMFGKDLLMMGPPLFTDRPQEKPICIFISNLDQLRAAAPPISPLLWEFMENVYPGGVGCIIQKGEWLKKLGVGAGYSRVGTQDSIMIRVPDLTVLVHLIDMTGPLAITSANPSGEVDSTHHDMVISRLGHKLEGVLCDGESDEVVASTVVNCTKIDESGITIVREGCIPAGKVMQIFERVKNRVL
SIO_010081: LOC116794065
subclass of: SO_0000673
so part of: LOC116794065
location: join(2217839..2217986,2218416..2219870,2220677..2220769,2221341..2221445,2222035..2222144,2224739..2224901,2225738..2225903,2226048..2226142,2226766..2226851)
location: region:2217839-2226851:1
so has part: feature:2217839-2217986:1:exon
so has part: feature:2218416-2219870:1:exon
so has part: feature:2220677-2220769:1:exon
so has part: feature:2221341-2221445:1:exon
so has part: feature:2222035-2222144:1:exon
so has part: feature:2224739-2224901:1:exon
so has part: feature:2225738-2225903:1:exon
so has part: feature:2226048-2226142:1:exon
so has part: feature:2226766-2226851:1:exon

XP_032558288.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2217839-2217986:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2218416-2219870:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2220677-2220769:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2221341-2221445:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2222035-2222144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2224739-2224901:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2225738-2225903:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2226048-2226142:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2226766-2226851:1:exon

LOC116794065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116794065
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116794065 isoform X2
translation: MAGFAAVFYSEPAVLGLLGNVVSAFLLCLQNFTVAQSGLRPRGAEDILAGVHLVLIGGFVQLLAGFLAFRKYDHLGGAAFLTFSALWSSYGATRIVSAAYPSPQNTTLPAGNGSHLLPLGAAQLSASQSAVAGLVAYISISFVLCFCSATVNYIMPFIFGAIALALVFEAVALFCQWALVVSGAIELVIVTCGLYGAVALLLKGITQRYVLPGFGHPLFNVLLLGSAQKSSSKAIGEEKKKNTKYAEPMTLGNICDTVSPFIFAFYFFGYMKTFCVGAVWISIISSCQLLSSFYSYLRGDAYHTTKFGVHSLYWLVMSWEEFILTAFLGLPRAQESRLGMFGGWFFLATACTLFLMSTHKDTLEMLQNASFVILTTAFIHQIPLPGAQPLLGTACSLCTALSLYATFASLINSIGEKALIPVGAQAVSSSALQTALVALKALLMSTEELPGGTGAAVPDALFYVCNGLAAASAIQGGLGDPGRQQLSIPSVLIPGAVGQLYVCRIQAWGGRRFGSVLPFCYAAFWAAWAWLRLAASSFNVVLLCVTLAMELLSICFLLFTLENLPLPFEIVVLSIFSILCFYGATASLANCMFGKDLLMMGPPLFTAGSSKKDTQDPPPCVCPQSHCTSGLRTIAELLNTGAVCGVPTDTVYALAASCKHPQAIEKVYRIKDRPQEKPICIFISNLDQLRAAAPPISPLLWEFMENVYPGGVGCIIQKGEWLKKLGVGAGYSRVGTQDSIMIRVPDLTVLVHLIDMTGPLAITSANPSGEVDSTHHDMVISRLGHKLEGVLCDGESDEVVASTVVNCTKIDESGITIVREGCIPAGKVMQIFERVKNRVL
SIO_010081: LOC116794065
subclass of: SO_0000673
so part of: LOC116794065
location: join(2217839..2217986,2218416..2219870,2221341..2221445,2222035..2222144,2223004..2223198,2224739..2224901,2225738..2225903,2226048..2226142,2226766..2226851)
location: region:2217839-2226851:1
so has part: feature:2217839-2217986:1:exon
so has part: feature:2218416-2219870:1:exon
so has part: feature:2221341-2221445:1:exon
so has part: feature:2222035-2222144:1:exon
so has part: feature:2223004-2223198:1:exon
so has part: feature:2224739-2224901:1:exon
so has part: feature:2225738-2225903:1:exon
so has part: feature:2226048-2226142:1:exon
so has part: feature:2226766-2226851:1:exon

XP_032558287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2217839-2217986:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2218416-2219870:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2221341-2221445:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2222035-2222144:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2223004-2223198:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2224739-2224901:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2225738-2225903:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2226048-2226142:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2226766-2226851:1:exon

LOC116793823
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793823
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2235044..2244640)
location: region:2235044-2244640:-1
so has part: feature:2235044-2244640:-1:exon
subclass of: SO_0000010

116793823
type: Gene
SIO_000068: ncbigene

position:2235044:-1
position: 2235044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2244640:-1
position: 2244640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2235044-2244640:-1:exon

LOC116793823
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116793823
product: uncharacterized LOC116793823
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032701973.1
SIO_010081: LOC116793823
subclass of: SO_0000673
so part of: LOC116793823
location: complement(join(2235044..2236766,2237280..2237402,2238490..2238579,2239051..2239163,2239322..2239470,2240167..2240266,2240901..2242592,2243603..2243716,2244565..2244640))
location: region:2235044-2244640:-1
so has part: feature:2244565-2244640:-1:exon
so has part: feature:2243603-2243716:-1:exon
so has part: feature:2240901-2242592:-1:exon
so has part: feature:2240167-2240266:-1:exon
so has part: feature:2239322-2239470:-1:exon
so has part: feature:2239051-2239163:-1:exon
so has part: feature:2238490-2238579:-1:exon
so has part: feature:2237280-2237402:-1:exon
so has part: feature:2235044-2236766:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2244565-2244640:-1:exon

position:2244565:-1
position: 2244565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2243603-2243716:-1:exon

position:2243603:-1
position: 2243603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2243716:-1
position: 2243716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2240901-2242592:-1:exon

position:2240901:-1
position: 2240901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2242592:-1
position: 2242592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2240167-2240266:-1:exon

position:2240167:-1
position: 2240167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2240266:-1
position: 2240266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2239322-2239470:-1:exon

position:2239322:-1
position: 2239322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2239470:-1
position: 2239470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2239051-2239163:-1:exon

position:2239051:-1
position: 2239051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2239163:-1
position: 2239163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2238490-2238579:-1:exon

position:2238490:-1
position: 2238490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2238579:-1
position: 2238579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2237280-2237402:-1:exon

position:2237280:-1
position: 2237280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2237402:-1
position: 2237402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2235044-2236766:-1:exon

position:2236766:-1
position: 2236766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116793823
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116793823
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116793823
translation: MGDGAGSLHCCLGLLGIAAGSLLLAVHFYSSARAAPLIPSTALGVLLLILSALLAYAGIRRSPRNASLLLSLCLTISAFWCGYGVTFILAGQGALGDAGDLRDAVVPGLATFTVALLLVAVVGLLCREPVLALISGATSLASAHDVAARHSRALCSSAVACNYLIVCLLGGYFALGRILCFLTKGKMALPGTDLAKKKSHEQTQAAGGSTNPFVATGLILNMLWAGVFGCRLLGITNKLFMGQVPWLWAAGIYQIGICILSYRAMDVLMATSFGFTSILKFAGGYCLLYPLWQPEEPSLPTAFLVVFSILFAILALFLFLESPLDGLYLLVYVASCLALACHPRGFFAGGPQGVAVAVFVASALVALIHLYSVKAGAKTPPGKGKGAVKALLARSSFLKLREGPDLHAPYLGYSKYADAEALAFACSVLASSALTAPGDPQAPLATVVIPWVVVAGGILKLLGGSVAFARGKTLESSAFILYAVMWIIWGLARYGGLYGTTRSFHSAVGIAAFMLFNGFIVFCSLFLNITWFFYSLTFMLVALSFFLDAIHALPTGYDMAATLSFGLVSFYCFLSALSSSTFEGPCLPMGGPIVQLGGVRGGTSKCLHLPARRASSVKRIADILRSGGTCGIPTDTVYVLVAACNRPDAVEKAHRSKRQAQDRPMSLWISSLKQLEPAKHLFTPLLWDFMEAAWPSPISLVVPRGEWVDFLGMKDSAKYVGTPQSVAIRIPDCSVTTHLIDLVGPIVVTSANPTGEADTTHHNQVYAKLGDKVDAVLCDGPSPENVASTVVDCTKIDSGNIGFFRVGLIPKSQVLQILEQVQKKHQEAPNSGTGPVKGREEALGRSHTVPNGVGMAARVETGPAQAPDDGCEHHTRL
SIO_010081: LOC116793823
subclass of: SO_0000673
so part of: LOC116793823
location: complement(join(2236572..2236766,2237280..2237402,2238490..2238579,2239051..2239163,2239322..2239470,2240167..2240266,2240901..2242592,2243603..2243716,2244565..2244622))
location: region:2236572-2244622:-1
so has part: feature:2244565-2244622:-1:exon
so has part: feature:2243603-2243716:-1:exon
so has part: feature:2240901-2242592:-1:exon
so has part: feature:2240167-2240266:-1:exon
so has part: feature:2239322-2239470:-1:exon
so has part: feature:2239051-2239163:-1:exon
so has part: feature:2238490-2238579:-1:exon
so has part: feature:2237280-2237402:-1:exon
so has part: feature:2236572-2236766:-1:exon

XP_032557864.1
type: Protein
SIO_000068: ncbiprotein

position:2236572:-1
position: 2236572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2244622:-1
position: 2244622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2244565-2244622:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2243603-2243716:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2240901-2242592:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2240167-2240266:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2239322-2239470:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2239051-2239163:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2238490-2238579:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2237280-2237402:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2236572-2236766:-1:exon

LOC116793853
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793853
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2247687..2253063
location: region:2247687-2253063:1
so has part: feature:2247687-2253063:1:exon
subclass of: SO_0000010

116793853
type: Gene
SIO_000068: ncbigene

position:2247687:1
position: 2247687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2253063:1
position: 2253063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2247687-2253063:1:exon

LOC116793853
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116793853
product: glutamine amidotransferase-like class 1 domain-containing protein 3A, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032702028.1
SIO_010081: LOC116793853
subclass of: SO_0000673
so part of: LOC116793853
location: join(2247687..2247907,2249718..2249889,2251015..2251216,2252629..2253063)
location: region:2247687-2253063:1
so has part: feature:2247687-2247907:1:exon
so has part: feature:2249718-2249889:1:exon
so has part: feature:2251015-2251216:1:exon
so has part: feature:2252629-2253063:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2247687-2247907:1:exon

position:2247907:1
position: 2247907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2249718-2249889:1:exon

position:2249718:1
position: 2249718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2249889:1
position: 2249889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2251015-2251216:1:exon

position:2251015:1
position: 2251015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2251216:1
position: 2251216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2252629-2253063:1:exon

position:2252629:1
position: 2252629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116793853
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116793853
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamine amidotransferase-like class 1 domain-containing protein 3A, mitochondrial
translation: MGKRVAVVLAGCGVYDGSEIHEASAVLVHLSREGAQAEVFAPNISQMHVVDHVKGQPTPEQRNVLVESARIARGNIKDLAQLDVKGLDALIIPGGFGVAKNLSTWATQGKNCSVCREVEDVLRAFHAAHKPIGLCCISPVLAAKLFPGCEVTVGHDTECDKWPYAKTAESMRELGCKHVNSHVTEIHVDPRNRLVTTSAFMCNAPIHEIHDGIGNMVKEVVRLA
SIO_010081: LOC116793853
subclass of: SO_0000673
so part of: LOC116793853
location: join(2247800..2247907,2249718..2249889,2251015..2251216,2252629..2252821)
location: region:2247800-2252821:1
so has part: feature:2247800-2247907:1:exon
so has part: feature:2249718-2249889:1:exon
so has part: feature:2251015-2251216:1:exon
so has part: feature:2252629-2252821:1:exon

XP_032557919.1
type: Protein
SIO_000068: ncbiprotein

position:2247800:1
position: 2247800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2252821:1
position: 2252821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2247800-2247907:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2249718-2249889:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2251015-2251216:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2252629-2252821:1:exon

LOC116793854
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793854
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2253930..2258808)
location: region:2253930-2258808:-1
so has part: feature:2253930-2258808:-1:exon
subclass of: SO_0000010

116793854
type: Gene
SIO_000068: ncbigene

position:2253930:-1
position: 2253930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2258808:-1
position: 2258808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2253930-2258808:-1:exon

LOC116793854
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116793854
product: centrin-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 3 ESTs, 4 long SRA reads, 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032702029.1
SIO_010081: LOC116793854
subclass of: SO_0000673
so part of: LOC116793854
location: complement(join(2253930..2254621,2255054..2255191,2255863..2255991,2257149..2257307,2258606..2258808))
location: region:2253930-2258808:-1
so has part: feature:2258606-2258808:-1:exon
so has part: feature:2257149-2257307:-1:exon
so has part: feature:2255863-2255991:-1:exon
so has part: feature:2255054-2255191:-1:exon
so has part: feature:2253930-2254621:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2258606-2258808:-1:exon

position:2258606:-1
position: 2258606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2257149-2257307:-1:exon

position:2257149:-1
position: 2257149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2257307:-1
position: 2257307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2255863-2255991:-1:exon

position:2255863:-1
position: 2255863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2255991:-1
position: 2255991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2255054-2255191:-1:exon

position:2255054:-1
position: 2255054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2255191:-1
position: 2255191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2253930-2254621:-1:exon

position:2254621:-1
position: 2254621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116793854
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116793854
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrin-2-like
translation: MGERGIEAAGSEGGGMACSCKKPALGAAPQRKKASPKAELSEEQQREIREAFELFHADGSDSIDVKELKVAMRALGFEPKKEEIKKMISDIDKEGTGKISFDDFLAAMTQKMAEKDSKEEILKAFKLFDDDETGKISFQNLKRVAKELGENLTDEELQEMIDEADRDGDGEVDEQEFLRIMRKTSLY
SIO_010081: LOC116793854
subclass of: SO_0000673
so part of: LOC116793854
location: complement(join(2254532..2254621,2255054..2255191,2255863..2255991,2257149..2257307,2258606..2258653))
location: region:2254532-2258653:-1
so has part: feature:2258606-2258653:-1:exon
so has part: feature:2257149-2257307:-1:exon
so has part: feature:2255863-2255991:-1:exon
so has part: feature:2255054-2255191:-1:exon
so has part: feature:2254532-2254621:-1:exon

XP_032557920.1
type: Protein
SIO_000068: ncbiprotein

position:2254532:-1
position: 2254532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2258653:-1
position: 2258653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2258606-2258653:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2257149-2257307:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2255863-2255991:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2255054-2255191:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2254532-2254621:-1:exon

NSDHL
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: NSDHL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2258864..2273406
location: region:2258864-2273406:1
so has part: feature:2258864-2273406:1:exon
subclass of: SO_0000010

116793852
type: Gene
SIO_000068: ncbigene

position:2258864:1
position: 2258864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2273406:1
position: 2273406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2258864-2273406:1:exon

NSDHL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: NSDHL
product: NAD(P) dependent steroid dehydrogenase-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 2 long SRA reads, 15 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032702025.1
SIO_010081: NSDHL
subclass of: SO_0000673
so part of: NSDHL
location: join(2258864..2258949,2260537..2260586,2263661..2263822,2265515..2265661,2266926..2267054,2268503..2268645,2271616..2271718,2272460..2273406)
location: region:2258864-2273406:1
so has part: feature:2258864-2258949:1:exon
so has part: feature:2260537-2260586:1:exon
so has part: feature:2263661-2263822:1:exon
so has part: feature:2265515-2265661:1:exon
so has part: feature:2266926-2267054:1:exon
so has part: feature:2268503-2268645:1:exon
so has part: feature:2271616-2271718:1:exon
so has part: feature:2272460-2273406:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2258864-2258949:1:exon

position:2258949:1
position: 2258949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2260537-2260586:1:exon

position:2260537:1
position: 2260537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2260586:1
position: 2260586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2263661-2263822:1:exon

position:2263661:1
position: 2263661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2263822:1
position: 2263822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2265515-2265661:1:exon

position:2265515:1
position: 2265515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2265661:1
position: 2265661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2266926-2267054:1:exon

position:2266926:1
position: 2266926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2267054:1
position: 2267054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2268503-2268645:1:exon

position:2268503:1
position: 2268503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2268645:1
position: 2268645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2271616-2271718:1:exon

position:2271616:1
position: 2271616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2271718:1
position: 2271718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2272460-2273406:1:exon

position:2272460:1
position: 2272460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NSDHL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: NSDHL
product: NAD(P) dependent steroid dehydrogenase-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 4 long SRA reads, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032702018.1
SIO_010081: NSDHL
subclass of: SO_0000673
so part of: NSDHL
location: join(2258910..2258949,2260455..2260586,2263661..2263822,2265515..2265661,2266926..2267054,2268503..2268645,2271616..2271718,2272460..2273406)
location: region:2258910-2273406:1
so has part: feature:2258910-2258949:1:exon
so has part: feature:2260455-2260586:1:exon
so has part: feature:2263661-2263822:1:exon
so has part: feature:2265515-2265661:1:exon
so has part: feature:2266926-2267054:1:exon
so has part: feature:2268503-2268645:1:exon
so has part: feature:2271616-2271718:1:exon
so has part: feature:2272460-2273406:1:exon

position:2258910:1
position: 2258910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2258910-2258949:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2260455-2260586:1:exon

position:2260455:1
position: 2260455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2263661-2263822:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2265515-2265661:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2266926-2267054:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2268503-2268645:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2271616-2271718:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2272460-2273406:1:exon

NSDHL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: NSDHL
product: NAD(P) dependent steroid dehydrogenase-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 long SRA read, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032702023.1
SIO_010081: NSDHL
subclass of: SO_0000673
so part of: NSDHL
location: join(2258963..2258999,2260537..2260586,2263661..2263822,2265515..2265661,2266926..2267054,2268503..2268645,2271616..2271718,2272460..2273406)
location: region:2258963-2273406:1
so has part: feature:2258963-2258999:1:exon
so has part: feature:2260537-2260586:1:exon
so has part: feature:2263661-2263822:1:exon
so has part: feature:2265515-2265661:1:exon
so has part: feature:2266926-2267054:1:exon
so has part: feature:2268503-2268645:1:exon
so has part: feature:2271616-2271718:1:exon
so has part: feature:2272460-2273406:1:exon

position:2258963:1
position: 2258963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2258963-2258999:1:exon

position:2258999:1
position: 2258999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2260537-2260586:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2263661-2263822:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2265515-2265661:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2266926-2267054:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2268503-2268645:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2271616-2271718:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2272460-2273406:1:exon

NSDHL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: NSDHL
product: NAD(P) dependent steroid dehydrogenase-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 long SRA read, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032702019.1
SIO_010081: NSDHL
subclass of: SO_0000673
so part of: NSDHL
location: join(2258984..2258999,2260455..2260586,2263661..2263822,2265515..2265661,2266926..2267054,2268503..2268645,2271616..2271718,2272460..2273406)
location: region:2258984-2273406:1
so has part: feature:2258984-2258999:1:exon
so has part: feature:2260455-2260586:1:exon
so has part: feature:2263661-2263822:1:exon
so has part: feature:2265515-2265661:1:exon
so has part: feature:2266926-2267054:1:exon
so has part: feature:2268503-2268645:1:exon
so has part: feature:2271616-2271718:1:exon
so has part: feature:2272460-2273406:1:exon

position:2258984:1
position: 2258984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2258984-2258999:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2260455-2260586:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2263661-2263822:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2265515-2265661:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2266926-2267054:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2268503-2268645:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2271616-2271718:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2272460-2273406:1:exon

NSDHL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: NSDHL
product: NAD(P) dependent steroid dehydrogenase-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 long SRA read, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032702020.1
SIO_010081: NSDHL
subclass of: SO_0000673
so part of: NSDHL
location: join(2259411..2259528,2260537..2260586,2263661..2263822,2265515..2265661,2266926..2267054,2268503..2268645,2271616..2271718,2272460..2273406)
location: region:2259411-2273406:1
so has part: feature:2259411-2259528:1:exon
so has part: feature:2260537-2260586:1:exon
so has part: feature:2263661-2263822:1:exon
so has part: feature:2265515-2265661:1:exon
so has part: feature:2266926-2267054:1:exon
so has part: feature:2268503-2268645:1:exon
so has part: feature:2271616-2271718:1:exon
so has part: feature:2272460-2273406:1:exon

position:2259411:1
position: 2259411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2259411-2259528:1:exon

position:2259528:1
position: 2259528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2260537-2260586:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2263661-2263822:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2265515-2265661:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2266926-2267054:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2268503-2268645:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2271616-2271718:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2272460-2273406:1:exon

NSDHL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: NSDHL
product: NAD(P) dependent steroid dehydrogenase-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 long SRA read, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032702021.1
SIO_010081: NSDHL
subclass of: SO_0000673
so part of: NSDHL
location: join(2259701..2259817,2260537..2260586,2263661..2263822,2265515..2265661,2266926..2267054,2268503..2268645,2271616..2271718,2272460..2273406)
location: region:2259701-2273406:1
so has part: feature:2259701-2259817:1:exon
so has part: feature:2260537-2260586:1:exon
so has part: feature:2263661-2263822:1:exon
so has part: feature:2265515-2265661:1:exon
so has part: feature:2266926-2267054:1:exon
so has part: feature:2268503-2268645:1:exon
so has part: feature:2271616-2271718:1:exon
so has part: feature:2272460-2273406:1:exon

position:2259701:1
position: 2259701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2259701-2259817:1:exon

position:2259817:1
position: 2259817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2260537-2260586:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2263661-2263822:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2265515-2265661:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2266926-2267054:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2268503-2268645:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2271616-2271718:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2272460-2273406:1:exon

NSDHL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: NSDHL
product: NAD(P) dependent steroid dehydrogenase-like, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 long SRA read, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032702026.1
SIO_010081: NSDHL
subclass of: SO_0000673
so part of: NSDHL
location: join(2259778..2259839,2260537..2260586,2263661..2263822,2265515..2265661,2266926..2267054,2268503..2268645,2271616..2271718,2272460..2273406)
location: region:2259778-2273406:1
so has part: feature:2259778-2259839:1:exon
so has part: feature:2260537-2260586:1:exon
so has part: feature:2263661-2263822:1:exon
so has part: feature:2265515-2265661:1:exon
so has part: feature:2266926-2267054:1:exon
so has part: feature:2268503-2268645:1:exon
so has part: feature:2271616-2271718:1:exon
so has part: feature:2272460-2273406:1:exon

position:2259778:1
position: 2259778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2259778-2259839:1:exon

position:2259839:1
position: 2259839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2260537-2260586:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2263661-2263822:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2265515-2265661:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2266926-2267054:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2268503-2268645:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2271616-2271718:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2272460-2273406:1:exon

NSDHL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: NSDHL
product: NAD(P) dependent steroid dehydrogenase-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 long SRA read, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032702024.1
SIO_010081: NSDHL
subclass of: SO_0000673
so part of: NSDHL
location: join(2259934..2260003,2260537..2260586,2263661..2263822,2265515..2265661,2266926..2267054,2268503..2268645,2271616..2271718,2272460..2273406)
location: region:2259934-2273406:1
so has part: feature:2259934-2260003:1:exon
so has part: feature:2260537-2260586:1:exon
so has part: feature:2263661-2263822:1:exon
so has part: feature:2265515-2265661:1:exon
so has part: feature:2266926-2267054:1:exon
so has part: feature:2268503-2268645:1:exon
so has part: feature:2271616-2271718:1:exon
so has part: feature:2272460-2273406:1:exon

position:2259934:1
position: 2259934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2259934-2260003:1:exon

position:2260003:1
position: 2260003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2260537-2260586:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2263661-2263822:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2265515-2265661:1:exon