Chiroxiphia lanceolata isolate bChiLan1 chromosome 13, bChiLan1.pri, whole genome shotgun sequence.
type: Entry
definition: Chiroxiphia lanceolata isolate bChiLan1 chromosome 13, bChiLan1.pri, whole genome shotgun sequence.
sequence version: NC_045649.1
sequence date: 2020-02-29
sequence: sequence
division: CON
label: NC_045649.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA603801
dblink: SAMN12620979
keyword: WGS
keyword: RefSeq
source: Chiroxiphia lanceolata (lance-tailed manakin)
organism: Chiroxiphia lanceolata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Pipridae; Chiroxiphia.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020545.1.\nAssembly name: bChiLan1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/01/03. The original whole-genome shotgun project has the\naccession WNMC00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 08-OCT-2019\nAssembly Method :: FALCON v. DNANexus 1.9.0; FALCON-Unzip v.\n DNANexus 1.0.6; purge_haplotigs v.\n v1.0.3+ 1.Nov.2018; scaff10x v. 4.1.0;\n Bionano Solve DLS v. 3.2.1; Salsa HiC v.\n 2.2; Arrow smrtanalysis Pacbio polishing\n & gap filling v. 6.0.0.47841; longranger\n align v. 2.2.2; freebayes Illumina\n polishing v. 1.3.1; gEVAL manual curation\n v. 2019-10-08; VGP assembly pipeline v.\n 1.5\nAssembly Name :: bChiLan1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 67.75x\nSequencing Technology :: PacBio Sequel I CLR; llumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Chiroxiphia lanceolata Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 21201277
topology: linear
so has quality: SO_0000987
location: 1..21201277
location: region:1-21201277:1
RO_0002162: 296741

NC_045649
type: RefSeq
SIO_000068: refseq

PRJNA603801
type: BioProject
SIO_000068: bioproject

SAMN12620979
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21201277:1
position: 21201277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-21201277:1:source
so part of: sequence
organism: Chiroxiphia lanceolata
mol type: genomic DNA
isolate: bChiLan1
chromosome: 13
sex: female
tissue type: isolated red blood cells
dev stage: adult
country: Panama: Isla Boca Btava
lat lon: 8.2166658 N 82.2666656 W
collection date: 14-Apr-2017
collected by: Emily DuVal

296741
type: Taxonomy
SIO_000068: taxonomy

LOC116793230
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793230
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(22010..22945)
location: region:22010-22945:-1
so has part: feature:22010-22945:-1:exon
subclass of: SO_0000011

116793230
type: Gene
SIO_000068: ncbigene

position:22010:-1
position: 22010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22945:-1
position: 22945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22010-22945:-1:exon

LOC116793230
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116793230
product: uncharacterized LOC116793230
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004359408.1
SIO_010081: LOC116793230
subclass of: SO_0000673
so part of: LOC116793230
location: complement(join(22010..22053,22224..22340,22903..22945))
location: region:22010-22945:-1
so has part: feature:22903-22945:-1:exon
so has part: feature:22224-22340:-1:exon
so has part: feature:22010-22053:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22903-22945:-1:exon

position:22903:-1
position: 22903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:22224-22340:-1:exon

position:22224:-1
position: 22224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22340:-1
position: 22340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:22010-22053:-1:exon

position:22053:-1
position: 22053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116793570
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793570
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(23850..26983)
location: region:23850-26983:-1
so has part: feature:23850-26983:-1:exon
subclass of: SO_0000010

116793570
type: Gene
SIO_000068: ncbigene

position:23850:-1
position: 23850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26983:-1
position: 26983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23850-26983:-1:exon

LOC116793570
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116793570
product: uncharacterized LOC116793570
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 81% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032701515.1
SIO_010081: LOC116793570
subclass of: SO_0000673
so part of: LOC116793570
location: complement(join(23850..23920,24029..24076,24568..24686,25687..26072,26969..26983))
location: region:23850-26983:-1
so has part: feature:26969-26983:-1:exon
so has part: feature:25687-26072:-1:exon
so has part: feature:24568-24686:-1:exon
so has part: feature:24029-24076:-1:exon
so has part: feature:23850-23920:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26969-26983:-1:exon

position:26969:-1
position: 26969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:25687-26072:-1:exon

position:25687:-1
position: 25687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26072:-1
position: 26072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:24568-24686:-1:exon

position:24568:-1
position: 24568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24686:-1
position: 24686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:24029-24076:-1:exon

position:24029:-1
position: 24029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24076:-1
position: 24076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:23850-23920:-1:exon

position:23920:-1
position: 23920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116793570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116793570
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116793570
translation: MALAQKFLLVAGLEAAAPEKSALPPRRLGEWGARGCSAAPGRVRVPVLPQCVKRAALSRFKPRHSHRTGRGSVEVLPASRYYLTPHPPSRSALGAPGAQPSTAGGSRHPRGSLRAPPRLVPVPPGSPLARSSRRSLASFGISQSSQLQFGIFSPVLSSPQVKLLCVEDGYRYPDAEPWAQEALGTGGEVIQGFCHLLTDSPVLQGPCQ
SIO_010081: LOC116793570
subclass of: SO_0000673
so part of: LOC116793570
location: complement(join(23862..23920,24029..24076,24568..24686,25687..26072,26969..26983))
location: region:23862-26983:-1
so has part: feature:26969-26983:-1:exon
so has part: feature:25687-26072:-1:exon
so has part: feature:24568-24686:-1:exon
so has part: feature:24029-24076:-1:exon
so has part: feature:23862-23920:-1:exon

XP_032557406.1
type: Protein
SIO_000068: ncbiprotein

position:23862:-1
position: 23862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26969-26983:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:25687-26072:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:24568-24686:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24029-24076:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:23862-23920:-1:exon

SLC12A4
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: SLC12A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(26795..74979)
location: region:26795-74979:-1
so has part: feature:26795-74979:-1:exon
subclass of: SO_0000010

116793560
type: Gene
SIO_000068: ncbigene

position:26795:-1
position: 26795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74979:-1
position: 74979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26795-74979:-1:exon

SLC12A4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SLC12A4
product: solute carrier family 12 member 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 3 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032701495.1
SIO_010081: SLC12A4
subclass of: SO_0000673
so part of: SLC12A4
location: complement(join(26795..27951,29001..29134,31071..31085,31832..32016,32668..32775,32872..33003,33171..33340,34019..34214,35297..35465,36460..36564,37314..37433,37736..37834,38300..38418,38802..38976,39496..39553,41067..41165,41248..41412,42413..42627,44200..44441,44873..45003,45330..45384,45959..46105,51558..51689,53363..53457,74741..74936))
location: region:26795-74936:-1
so has part: feature:74741-74936:-1:exon
so has part: feature:53363-53457:-1:exon
so has part: feature:51558-51689:-1:exon
so has part: feature:45959-46105:-1:exon
so has part: feature:45330-45384:-1:exon
so has part: feature:44873-45003:-1:exon
so has part: feature:44200-44441:-1:exon
so has part: feature:42413-42627:-1:exon
so has part: feature:41248-41412:-1:exon
so has part: feature:41067-41165:-1:exon
so has part: feature:39496-39553:-1:exon
so has part: feature:38802-38976:-1:exon
so has part: feature:38300-38418:-1:exon
so has part: feature:37736-37834:-1:exon
so has part: feature:37314-37433:-1:exon
so has part: feature:36460-36564:-1:exon
so has part: feature:35297-35465:-1:exon
so has part: feature:34019-34214:-1:exon
so has part: feature:33171-33340:-1:exon
so has part: feature:32872-33003:-1:exon
so has part: feature:32668-32775:-1:exon
so has part: feature:31832-32016:-1:exon
so has part: feature:31071-31085:-1:exon
so has part: feature:29001-29134:-1:exon
so has part: feature:26795-27951:-1:exon

position:74936:-1
position: 74936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74741-74936:-1:exon

position:74741:-1
position: 74741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:53363-53457:-1:exon

position:53363:-1
position: 53363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53457:-1
position: 53457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:51558-51689:-1:exon

position:51558:-1
position: 51558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51689:-1
position: 51689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:45959-46105:-1:exon

position:45959:-1
position: 45959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46105:-1
position: 46105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:45330-45384:-1:exon

position:45330:-1
position: 45330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45384:-1
position: 45384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:44873-45003:-1:exon

position:44873:-1
position: 44873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45003:-1
position: 45003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:44200-44441:-1:exon

position:44200:-1
position: 44200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44441:-1
position: 44441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:42413-42627:-1:exon

position:42413:-1
position: 42413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42627:-1
position: 42627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:41248-41412:-1:exon

position:41248:-1
position: 41248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41412:-1
position: 41412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:41067-41165:-1:exon

position:41067:-1
position: 41067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41165:-1
position: 41165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:39496-39553:-1:exon

position:39496:-1
position: 39496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39553:-1
position: 39553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:38802-38976:-1:exon

position:38802:-1
position: 38802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38976:-1
position: 38976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:38300-38418:-1:exon

position:38300:-1
position: 38300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38418:-1
position: 38418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:37736-37834:-1:exon

position:37736:-1
position: 37736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37834:-1
position: 37834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:37314-37433:-1:exon

position:37314:-1
position: 37314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37433:-1
position: 37433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:36460-36564:-1:exon

position:36460:-1
position: 36460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36564:-1
position: 36564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:35297-35465:-1:exon

position:35297:-1
position: 35297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35465:-1
position: 35465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:34019-34214:-1:exon

position:34019:-1
position: 34019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34214:-1
position: 34214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:33171-33340:-1:exon

position:33171:-1
position: 33171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33340:-1
position: 33340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:32872-33003:-1:exon

position:32872:-1
position: 32872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33003:-1
position: 33003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:32668-32775:-1:exon

position:32668:-1
position: 32668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32775:-1
position: 32775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:31832-32016:-1:exon

position:31832:-1
position: 31832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32016:-1
position: 32016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:31071-31085:-1:exon

position:31071:-1
position: 31071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31085:-1
position: 31085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:29001-29134:-1:exon

position:29001:-1
position: 29001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29134:-1
position: 29134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:26795-27951:-1:exon

position:27951:-1
position: 27951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC12A4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SLC12A4
product: solute carrier family 12 member 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 3 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032701499.1
SIO_010081: SLC12A4
subclass of: SO_0000673
so part of: SLC12A4
location: complement(join(26795..27951,29001..29134,31071..31085,31832..32016,32668..32775,32872..33003,33171..33340,34019..34214,35297..35465,36460..36564,37314..37433,37736..37834,38300..38418,38802..38976,39496..39553,41067..41165,41248..41412,42413..42627,44200..44441,44873..45003,45330..45384,45959..46105,51558..51689,53363..53457,63242..63334))
location: region:26795-63334:-1
so has part: feature:63242-63334:-1:exon
so has part: feature:53363-53457:-1:exon
so has part: feature:51558-51689:-1:exon
so has part: feature:45959-46105:-1:exon
so has part: feature:45330-45384:-1:exon
so has part: feature:44873-45003:-1:exon
so has part: feature:44200-44441:-1:exon
so has part: feature:42413-42627:-1:exon
so has part: feature:41248-41412:-1:exon
so has part: feature:41067-41165:-1:exon
so has part: feature:39496-39553:-1:exon
so has part: feature:38802-38976:-1:exon
so has part: feature:38300-38418:-1:exon
so has part: feature:37736-37834:-1:exon
so has part: feature:37314-37433:-1:exon
so has part: feature:36460-36564:-1:exon
so has part: feature:35297-35465:-1:exon
so has part: feature:34019-34214:-1:exon
so has part: feature:33171-33340:-1:exon
so has part: feature:32872-33003:-1:exon
so has part: feature:32668-32775:-1:exon
so has part: feature:31832-32016:-1:exon
so has part: feature:31071-31085:-1:exon
so has part: feature:29001-29134:-1:exon
so has part: feature:26795-27951:-1:exon

position:63334:-1
position: 63334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63242-63334:-1:exon

position:63242:-1
position: 63242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:53363-53457:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:51558-51689:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45959-46105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45330-45384:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44873-45003:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44200-44441:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:42413-42627:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:41248-41412:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:41067-41165:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:39496-39553:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:38802-38976:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:38300-38418:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:37736-37834:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:37314-37433:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:36460-36564:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:35297-35465:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:34019-34214:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:33171-33340:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:32872-33003:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:32668-32775:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:31832-32016:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:31071-31085:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:29001-29134:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:26795-27951:-1:exon

SLC12A4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SLC12A4
product: solute carrier family 12 member 4, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 3 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032701500.1
SIO_010081: SLC12A4
subclass of: SO_0000673
so part of: SLC12A4
location: complement(join(26795..27951,29001..29134,31071..31085,31832..32016,32668..32775,32872..33003,33171..33340,34019..34214,35297..35465,36460..36564,37314..37433,37736..37834,38300..38418,38802..38976,39496..39553,41067..41165,41248..41412,42413..42627,44200..44441,44873..45003,45330..45384,45959..46105,51558..51689,53363..53457,61908..62008,63242..63302))
location: region:26795-63302:-1
so has part: feature:63242-63302:-1:exon
so has part: feature:61908-62008:-1:exon
so has part: feature:53363-53457:-1:exon
so has part: feature:51558-51689:-1:exon
so has part: feature:45959-46105:-1:exon
so has part: feature:45330-45384:-1:exon
so has part: feature:44873-45003:-1:exon
so has part: feature:44200-44441:-1:exon
so has part: feature:42413-42627:-1:exon
so has part: feature:41248-41412:-1:exon
so has part: feature:41067-41165:-1:exon
so has part: feature:39496-39553:-1:exon
so has part: feature:38802-38976:-1:exon
so has part: feature:38300-38418:-1:exon
so has part: feature:37736-37834:-1:exon
so has part: feature:37314-37433:-1:exon
so has part: feature:36460-36564:-1:exon
so has part: feature:35297-35465:-1:exon
so has part: feature:34019-34214:-1:exon
so has part: feature:33171-33340:-1:exon
so has part: feature:32872-33003:-1:exon
so has part: feature:32668-32775:-1:exon
so has part: feature:31832-32016:-1:exon
so has part: feature:31071-31085:-1:exon
so has part: feature:29001-29134:-1:exon
so has part: feature:26795-27951:-1:exon

position:63302:-1
position: 63302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63242-63302:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:61908-62008:-1:exon

position:61908:-1
position: 61908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62008:-1
position: 62008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:53363-53457:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:51558-51689:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45959-46105:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:45330-45384:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44873-45003:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:44200-44441:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:42413-42627:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:41248-41412:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:41067-41165:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:39496-39553:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:38802-38976:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:38300-38418:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:37736-37834:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:37314-37433:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:36460-36564:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:35297-35465:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:34019-34214:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:33171-33340:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:32872-33003:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:32668-32775:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:31832-32016:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:31071-31085:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:29001-29134:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:26795-27951:-1:exon

SLC12A4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SLC12A4
product: solute carrier family 12 member 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 3 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032701496.1
SIO_010081: SLC12A4
subclass of: SO_0000673
so part of: SLC12A4
location: complement(join(26795..27951,29001..29134,31071..31085,31832..32016,32668..32775,32872..33003,33171..33340,34019..34214,35297..35465,36460..36564,37314..37433,37736..37834,38300..38418,38802..38976,39496..39553,41067..41165,41248..41412,42413..42627,44200..44441,44873..45003,45330..45384,45959..46105,51558..51689,53363..53457,56876..57114))
location: region:26795-57114:-1
so has part: feature:56876-57114:-1:exon
so has part: feature:53363-53457:-1:exon
so has part: feature:51558-51689:-1:exon
so has part: feature:45959-46105:-1:exon
so has part: feature:45330-45384:-1:exon
so has part: feature:44873-45003:-1:exon
so has part: feature:44200-44441:-1:exon
so has part: feature:42413-42627:-1:exon
so has part: feature:41248-41412:-1:exon
so has part: feature:41067-41165:-1:exon
so has part: feature:39496-39553:-1:exon
so has part: feature:38802-38976:-1:exon
so has part: feature:38300-38418:-1:exon
so has part: feature:37736-37834:-1:exon
so has part: feature:37314-37433:-1:exon
so has part: feature:36460-36564:-1:exon
so has part: feature:35297-35465:-1:exon
so has part: feature:34019-34214:-1:exon
so has part: feature:33171-33340:-1:exon
so has part: feature:32872-33003:-1:exon
so has part: feature:32668-32775:-1:exon
so has part: feature:31832-32016:-1:exon
so has part: feature:31071-31085:-1:exon
so has part: feature:29001-29134:-1:exon
so has part: feature:26795-27951:-1:exon

position:57114:-1
position: 57114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56876-57114:-1:exon

position:56876:-1
position: 56876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:53363-53457:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:51558-51689:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45959-46105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45330-45384:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44873-45003:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44200-44441:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:42413-42627:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:41248-41412:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:41067-41165:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:39496-39553:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:38802-38976:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:38300-38418:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:37736-37834:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:37314-37433:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:36460-36564:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:35297-35465:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:34019-34214:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:33171-33340:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:32872-33003:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:32668-32775:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:31832-32016:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:31071-31085:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:29001-29134:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:26795-27951:-1:exon

SLC12A4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SLC12A4
product: solute carrier family 12 member 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 5 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032701497.1
SIO_010081: SLC12A4
subclass of: SO_0000673
so part of: SLC12A4
location: complement(join(26795..27951,29001..29134,31832..32016,32668..32775,32872..33003,33171..33340,34019..34214,35297..35465,36460..36564,37314..37433,37736..37834,38300..38418,38802..38976,39496..39553,41067..41165,41248..41412,42413..42627,44200..44441,44873..45003,45330..45384,45959..46105,51558..51689,53363..53457,56876..57112))
location: region:26795-57112:-1
so has part: feature:56876-57112:-1:exon
so has part: feature:53363-53457:-1:exon
so has part: feature:51558-51689:-1:exon
so has part: feature:45959-46105:-1:exon
so has part: feature:45330-45384:-1:exon
so has part: feature:44873-45003:-1:exon
so has part: feature:44200-44441:-1:exon
so has part: feature:42413-42627:-1:exon
so has part: feature:41248-41412:-1:exon
so has part: feature:41067-41165:-1:exon
so has part: feature:39496-39553:-1:exon
so has part: feature:38802-38976:-1:exon
so has part: feature:38300-38418:-1:exon
so has part: feature:37736-37834:-1:exon
so has part: feature:37314-37433:-1:exon
so has part: feature:36460-36564:-1:exon
so has part: feature:35297-35465:-1:exon
so has part: feature:34019-34214:-1:exon
so has part: feature:33171-33340:-1:exon
so has part: feature:32872-33003:-1:exon
so has part: feature:32668-32775:-1:exon
so has part: feature:31832-32016:-1:exon
so has part: feature:29001-29134:-1:exon
so has part: feature:26795-27951:-1:exon

position:57112:-1
position: 57112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56876-57112:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53363-53457:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:51558-51689:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45959-46105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45330-45384:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44873-45003:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44200-44441:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:42413-42627:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:41248-41412:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:41067-41165:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:39496-39553:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:38802-38976:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:38300-38418:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:37736-37834:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:37314-37433:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:36460-36564:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:35297-35465:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:34019-34214:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:33171-33340:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:32872-33003:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:32668-32775:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:31832-32016:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:29001-29134:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:26795-27951:-1:exon

SLC12A4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SLC12A4
product: solute carrier family 12 member 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, 3 long SRA reads, 26 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_032701498.1
SIO_010081: SLC12A4
subclass of: SO_0000673
so part of: SLC12A4
location: complement(join(26803..27951,29001..29134,31832..32016,32668..32775,32872..33003,33171..33340,34019..34214,35297..35465,36460..36564,37314..37433,37736..37834,38300..38418,38802..38976,39496..39553,41067..41165,41248..41412,42413..42627,44200..44441,44873..45003,45330..45384,45959..46105,51558..51689,53363..53457,74741..74979))
location: region:26803-74979:-1
so has part: feature:74741-74979:-1:exon
so has part: feature:53363-53457:-1:exon
so has part: feature:51558-51689:-1:exon
so has part: feature:45959-46105:-1:exon
so has part: feature:45330-45384:-1:exon
so has part: feature:44873-45003:-1:exon
so has part: feature:44200-44441:-1:exon
so has part: feature:42413-42627:-1:exon
so has part: feature:41248-41412:-1:exon
so has part: feature:41067-41165:-1:exon
so has part: feature:39496-39553:-1:exon
so has part: feature:38802-38976:-1:exon
so has part: feature:38300-38418:-1:exon
so has part: feature:37736-37834:-1:exon
so has part: feature:37314-37433:-1:exon
so has part: feature:36460-36564:-1:exon
so has part: feature:35297-35465:-1:exon
so has part: feature:34019-34214:-1:exon
so has part: feature:33171-33340:-1:exon
so has part: feature:32872-33003:-1:exon
so has part: feature:32668-32775:-1:exon
so has part: feature:31832-32016:-1:exon
so has part: feature:29001-29134:-1:exon
so has part: feature:26803-27951:-1:exon

position:26803:-1
position: 26803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74741-74979:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53363-53457:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:51558-51689:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45959-46105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45330-45384:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44873-45003:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44200-44441:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:42413-42627:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:41248-41412:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:41067-41165:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:39496-39553:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:38802-38976:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:38300-38418:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:37736-37834:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:37314-37433:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:36460-36564:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:35297-35465:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:34019-34214:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:33171-33340:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:32872-33003:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:32668-32775:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:31832-32016:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:29001-29134:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:26803-27951:-1:exon

SLC12A4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SLC12A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 12 member 4 isoform X4
translation: MPHFTVVPVEDKPRAEYDSVEGLSWVDYREPAAVPAPGDSYDTVSSDGHGNHKENSPFLNSAEAGKGGDYYDRNLALFEEELDIRPKVSSLLGKLVNYTNLTQGVKEHEEAESTDGSKKKVSKSPSMGTLMGVYLPCMQNIFGVILFLRLTWMVGMAGVLQSFLIVLLCCCCTMLTTISMSAIATNGVVPAGGSYFMISRSLGPEFGGAVGLCFYLGTTFAGAMYILGAIEILLTYIVPQAAIFHPSSAHDASNAMLNNMRVYGTVFLILMAVVVFVGVKYVNKFASLFLACVVISILSIYAGAIKSIFDPPEFPICMLGNRTLSRDHFDVCAKTIVKDNITVASKLWELFCHTTNLTEEHCDEYFLMNNVSEIAGIPGAASGILIDNLWSNYLEKGEILEKAHHPSVDVAGQKNNLHLYVLSDIATSFMVLVGIFFPSVTGIMAGSNRSGDLKDAQKSIPVGTILAIVTTSLVYFSCVLLFGACIEGVVLRDKYGDAVNKNLVVGTLSWPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAIAKDNIIPFLWIFGHGKANGEPTWALLLTALIAELGILIASLDMVAPILSMFFLMCYLFVNLACAVQTLLRTPNWRPRFKYYHWALSFLGMSICLALMFISSWYYALVAMLIAGMIYKYIEYQGAEKEWGDGIRGLSLSAARYALLRLEEGPPHTKNWRPQLLVLLKLDEDLHVKYPRLLTFASQLKAGKGLTIIGSVIQGNFLETYGEAQAAEQTIKNMMEIEKVKGFCQVVVANKVREGIAHLIQSCGLGGMKHNTVVLGWPYGWRQSEDPRSWKTFIGTVRCTTAAHLALLVPKNVSFYPSNHERYNEGNIDVWWIVHDGGMLMLLPFLLKQHKVWRKCKMRIFTVAQMDDNSIQMKKDLATFLYQLRIEAEVEVVEMHNSDISAYTYERTLMMEQRSQMLRQMRLTKTEREREAQLVKDRHSIARLESLYSDEEDEGDPVPENIQMTWTKEKCDAEKRNRGSAVGSFRDLISIKPNQSNVRRMHTAVKLNEVIVNRSHDARLVLLNMPGPPKNTDGDENYMEFLEVLTEGLERVLLVRGGGREVITIYS
SIO_010081: SLC12A4
subclass of: SO_0000673
so part of: SLC12A4
location: complement(join(27860..27951,29001..29134,31832..32016,32668..32775,32872..33003,33171..33340,34019..34214,35297..35465,36460..36564,37314..37433,37736..37834,38300..38418,38802..38976,39496..39553,41067..41165,41248..41412,42413..42627,44200..44441,44873..45003,45330..45384,45959..46105,51558..51689,53363..53457,74741..74882))
location: region:27860-74882:-1
so has part: feature:74741-74882:-1:exon
so has part: feature:53363-53457:-1:exon
so has part: feature:51558-51689:-1:exon
so has part: feature:45959-46105:-1:exon
so has part: feature:45330-45384:-1:exon
so has part: feature:44873-45003:-1:exon
so has part: feature:44200-44441:-1:exon
so has part: feature:42413-42627:-1:exon
so has part: feature:41248-41412:-1:exon
so has part: feature:41067-41165:-1:exon
so has part: feature:39496-39553:-1:exon
so has part: feature:38802-38976:-1:exon
so has part: feature:38300-38418:-1:exon
so has part: feature:37736-37834:-1:exon
so has part: feature:37314-37433:-1:exon
so has part: feature:36460-36564:-1:exon
so has part: feature:35297-35465:-1:exon
so has part: feature:34019-34214:-1:exon
so has part: feature:33171-33340:-1:exon
so has part: feature:32872-33003:-1:exon
so has part: feature:32668-32775:-1:exon
so has part: feature:31832-32016:-1:exon
so has part: feature:29001-29134:-1:exon
so has part: feature:27860-27951:-1:exon

XP_032557389.1
type: Protein
SIO_000068: ncbiprotein

position:27860:-1
position: 27860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74882:-1
position: 74882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74741-74882:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53363-53457:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:51558-51689:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45959-46105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45330-45384:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44873-45003:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44200-44441:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:42413-42627:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:41248-41412:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:41067-41165:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:39496-39553:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:38802-38976:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:38300-38418:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:37736-37834:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:37314-37433:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:36460-36564:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:35297-35465:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:34019-34214:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:33171-33340:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:32872-33003:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:32668-32775:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:31832-32016:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:29001-29134:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:27860-27951:-1:exon

SLC12A4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SLC12A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 12 member 4 isoform X1
translation: MPHFTVVPVEDKPRAEYDSVEGLSWVDYREPAAVPAPGDSYDTVSSDGHGNHKENSPFLNSAEAGKGGDYYDRNLALFEEELDIRPKVSSLLGKLVNYTNLTQGVKEHEEAESTDGSKKKVSKSPSMGTLMGVYLPCMQNIFGVILFLRLTWMVGMAGVLQSFLIVLLCCCCTMLTTISMSAIATNGVVPAGGSYFMISRSLGPEFGGAVGLCFYLGTTFAGAMYILGAIEILLTYIVPQAAIFHPSSAHDASNAMLNNMRVYGTVFLILMAVVVFVGVKYVNKFASLFLACVVISILSIYAGAIKSIFDPPEFPICMLGNRTLSRDHFDVCAKTIVKDNITVASKLWELFCHTTNLTEEHCDEYFLMNNVSEIAGIPGAASGILIDNLWSNYLEKGEILEKAHHPSVDVAGQKNNLHLYVLSDIATSFMVLVGIFFPSVTGIMAGSNRSGDLKDAQKSIPVGTILAIVTTSLVYFSCVLLFGACIEGVVLRDKYGDAVNKNLVVGTLSWPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAIAKDNIIPFLWIFGHGKANGEPTWALLLTALIAELGILIASLDMVAPILSMFFLMCYLFVNLACAVQTLLRTPNWRPRFKYYHWALSFLGMSICLALMFISSWYYALVAMLIAGMIYKYIEYQGAEKEWGDGIRGLSLSAARYALLRLEEGPPHTKNWRPQLLVLLKLDEDLHVKYPRLLTFASQLKAGKGLTIIGSVIQGNFLETYGEAQAAEQTIKNMMEIEKVKGFCQVVVANKVREGIAHLIQSCGLGGMKHNTVVLGWPYGWRQSEDPRSWKTFIGTVRCTTAAHLALLVPKNVSFYPSNHERYNEGNIDVWWIVHDGGMLMLLPFLLKQHKVWRKCKMRIFTVAQMDDNSIQMKKDLATFLYQLRIEAEVEVVEMHNSDISAYTYERTLMMEQRSQMLRQMRLTKTEREREAQLVKDRHSIARLESLYSDEEDEGDPVPENIQMTWTKEKCDAEKRNRGSAVGSFRDLISIKPEWENLNQSNVRRMHTAVKLNEVIVNRSHDARLVLLNMPGPPKNTDGDENYMEFLEVLTEGLERVLLVRGGGREVITIYS
SIO_010081: SLC12A4
subclass of: SO_0000673
so part of: SLC12A4
location: complement(join(27860..27951,29001..29134,31071..31085,31832..32016,32668..32775,32872..33003,33171..33340,34019..34214,35297..35465,36460..36564,37314..37433,37736..37834,38300..38418,38802..38976,39496..39553,41067..41165,41248..41412,42413..42627,44200..44441,44873..45003,45330..45384,45959..46105,51558..51689,53363..53457,74741..74882))
location: region:27860-74882:-1
so has part: feature:74741-74882:-1:exon
so has part: feature:53363-53457:-1:exon
so has part: feature:51558-51689:-1:exon
so has part: feature:45959-46105:-1:exon
so has part: feature:45330-45384:-1:exon
so has part: feature:44873-45003:-1:exon
so has part: feature:44200-44441:-1:exon
so has part: feature:42413-42627:-1:exon
so has part: feature:41248-41412:-1:exon
so has part: feature:41067-41165:-1:exon
so has part: feature:39496-39553:-1:exon
so has part: feature:38802-38976:-1:exon
so has part: feature:38300-38418:-1:exon
so has part: feature:37736-37834:-1:exon
so has part: feature:37314-37433:-1:exon
so has part: feature:36460-36564:-1:exon
so has part: feature:35297-35465:-1:exon
so has part: feature:34019-34214:-1:exon
so has part: feature:33171-33340:-1:exon
so has part: feature:32872-33003:-1:exon
so has part: feature:32668-32775:-1:exon
so has part: feature:31832-32016:-1:exon
so has part: feature:31071-31085:-1:exon
so has part: feature:29001-29134:-1:exon
so has part: feature:27860-27951:-1:exon

XP_032557386.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74741-74882:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53363-53457:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:51558-51689:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45959-46105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45330-45384:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44873-45003:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44200-44441:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:42413-42627:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:41248-41412:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:41067-41165:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:39496-39553:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:38802-38976:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:38300-38418:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:37736-37834:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:37314-37433:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:36460-36564:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:35297-35465:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:34019-34214:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:33171-33340:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:32872-33003:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:32668-32775:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:31832-32016:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:31071-31085:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:29001-29134:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:27860-27951:-1:exon

SLC12A4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SLC12A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 12 member 4 isoform X5
translation: MVCACTIVSLGHVELKEGAGHGNHKENSPFLNSAEAGKGGDYYDRNLALFEEELDIRPKVSSLLGKLVNYTNLTQGVKEHEEAESTDGSKKKVSKSPSMGTLMGVYLPCMQNIFGVILFLRLTWMVGMAGVLQSFLIVLLCCCCTMLTTISMSAIATNGVVPAGGSYFMISRSLGPEFGGAVGLCFYLGTTFAGAMYILGAIEILLTYIVPQAAIFHPSSAHDASNAMLNNMRVYGTVFLILMAVVVFVGVKYVNKFASLFLACVVISILSIYAGAIKSIFDPPEFPICMLGNRTLSRDHFDVCAKTIVKDNITVASKLWELFCHTTNLTEEHCDEYFLMNNVSEIAGIPGAASGILIDNLWSNYLEKGEILEKAHHPSVDVAGQKNNLHLYVLSDIATSFMVLVGIFFPSVTGIMAGSNRSGDLKDAQKSIPVGTILAIVTTSLVYFSCVLLFGACIEGVVLRDKYGDAVNKNLVVGTLSWPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAIAKDNIIPFLWIFGHGKANGEPTWALLLTALIAELGILIASLDMVAPILSMFFLMCYLFVNLACAVQTLLRTPNWRPRFKYYHWALSFLGMSICLALMFISSWYYALVAMLIAGMIYKYIEYQGAEKEWGDGIRGLSLSAARYALLRLEEGPPHTKNWRPQLLVLLKLDEDLHVKYPRLLTFASQLKAGKGLTIIGSVIQGNFLETYGEAQAAEQTIKNMMEIEKVKGFCQVVVANKVREGIAHLIQSCGLGGMKHNTVVLGWPYGWRQSEDPRSWKTFIGTVRCTTAAHLALLVPKNVSFYPSNHERYNEGNIDVWWIVHDGGMLMLLPFLLKQHKVWRKCKMRIFTVAQMDDNSIQMKKDLATFLYQLRIEAEVEVVEMHNSDISAYTYERTLMMEQRSQMLRQMRLTKTEREREAQLVKDRHSIARLESLYSDEEDEGDPVPENIQMTWTKEKCDAEKRNRGSAVGSFRDLISIKPEWENLNQSNVRRMHTAVKLNEVIVNRSHDARLVLLNMPGPPKNTDGDENYMEFLEVLTEGLERVLLVRGGGREVITIYS
SIO_010081: SLC12A4
subclass of: SO_0000673
so part of: SLC12A4
location: complement(join(27860..27951,29001..29134,31071..31085,31832..32016,32668..32775,32872..33003,33171..33340,34019..34214,35297..35465,36460..36564,37314..37433,37736..37834,38300..38418,38802..38976,39496..39553,41067..41165,41248..41412,42413..42627,44200..44441,44873..45003,45330..45384,45959..46105,51558..51689,53363..53457,63242..63299))
location: region:27860-63299:-1
so has part: feature:63242-63299:-1:exon
so has part: feature:53363-53457:-1:exon
so has part: feature:51558-51689:-1:exon
so has part: feature:45959-46105:-1:exon
so has part: feature:45330-45384:-1:exon
so has part: feature:44873-45003:-1:exon
so has part: feature:44200-44441:-1:exon
so has part: feature:42413-42627:-1:exon
so has part: feature:41248-41412:-1:exon
so has part: feature:41067-41165:-1:exon
so has part: feature:39496-39553:-1:exon
so has part: feature:38802-38976:-1:exon
so has part: feature:38300-38418:-1:exon
so has part: feature:37736-37834:-1:exon
so has part: feature:37314-37433:-1:exon
so has part: feature:36460-36564:-1:exon
so has part: feature:35297-35465:-1:exon
so has part: feature:34019-34214:-1:exon
so has part: feature:33171-33340:-1:exon
so has part: feature:32872-33003:-1:exon
so has part: feature:32668-32775:-1:exon
so has part: feature:31832-32016:-1:exon
so has part: feature:31071-31085:-1:exon
so has part: feature:29001-29134:-1:exon
so has part: feature:27860-27951:-1:exon

XP_032557390.1
type: Protein
SIO_000068: ncbiprotein

position:63299:-1
position: 63299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63242-63299:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53363-53457:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:51558-51689:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45959-46105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45330-45384:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44873-45003:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44200-44441:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:42413-42627:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:41248-41412:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:41067-41165:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:39496-39553:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:38802-38976:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:38300-38418:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:37736-37834:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:37314-37433:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:36460-36564:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:35297-35465:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:34019-34214:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:33171-33340:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:32872-33003:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:32668-32775:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:31832-32016:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:31071-31085:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:29001-29134:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:27860-27951:-1:exon

SLC12A4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SLC12A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 12 member 4 isoform X6
translation: MVNQITENGKELLLKGHGNHKENSPFLNSAEAGKGGDYYDRNLALFEEELDIRPKVSSLLGKLVNYTNLTQGVKEHEEAESTDGSKKKVSKSPSMGTLMGVYLPCMQNIFGVILFLRLTWMVGMAGVLQSFLIVLLCCCCTMLTTISMSAIATNGVVPAGGSYFMISRSLGPEFGGAVGLCFYLGTTFAGAMYILGAIEILLTYIVPQAAIFHPSSAHDASNAMLNNMRVYGTVFLILMAVVVFVGVKYVNKFASLFLACVVISILSIYAGAIKSIFDPPEFPICMLGNRTLSRDHFDVCAKTIVKDNITVASKLWELFCHTTNLTEEHCDEYFLMNNVSEIAGIPGAASGILIDNLWSNYLEKGEILEKAHHPSVDVAGQKNNLHLYVLSDIATSFMVLVGIFFPSVTGIMAGSNRSGDLKDAQKSIPVGTILAIVTTSLVYFSCVLLFGACIEGVVLRDKYGDAVNKNLVVGTLSWPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAIAKDNIIPFLWIFGHGKANGEPTWALLLTALIAELGILIASLDMVAPILSMFFLMCYLFVNLACAVQTLLRTPNWRPRFKYYHWALSFLGMSICLALMFISSWYYALVAMLIAGMIYKYIEYQGAEKEWGDGIRGLSLSAARYALLRLEEGPPHTKNWRPQLLVLLKLDEDLHVKYPRLLTFASQLKAGKGLTIIGSVIQGNFLETYGEAQAAEQTIKNMMEIEKVKGFCQVVVANKVREGIAHLIQSCGLGGMKHNTVVLGWPYGWRQSEDPRSWKTFIGTVRCTTAAHLALLVPKNVSFYPSNHERYNEGNIDVWWIVHDGGMLMLLPFLLKQHKVWRKCKMRIFTVAQMDDNSIQMKKDLATFLYQLRIEAEVEVVEMHNSDISAYTYERTLMMEQRSQMLRQMRLTKTEREREAQLVKDRHSIARLESLYSDEEDEGDPVPENIQMTWTKEKCDAEKRNRGSAVGSFRDLISIKPEWENLNQSNVRRMHTAVKLNEVIVNRSHDARLVLLNMPGPPKNTDGDENYMEFLEVLTEGLERVLLVRGGGREVITIYS
SIO_010081: SLC12A4
subclass of: SO_0000673
so part of: SLC12A4
location: complement(join(27860..27951,29001..29134,31071..31085,31832..32016,32668..32775,32872..33003,33171..33340,34019..34214,35297..35465,36460..36564,37314..37433,37736..37834,38300..38418,38802..38976,39496..39553,41067..41165,41248..41412,42413..42627,44200..44441,44873..45003,45330..45384,45959..46105,51558..51689,53363..53457,61908..61953))
location: region:27860-61953:-1
so has part: feature:61908-61953:-1:exon
so has part: feature:53363-53457:-1:exon
so has part: feature:51558-51689:-1:exon
so has part: feature:45959-46105:-1:exon
so has part: feature:45330-45384:-1:exon
so has part: feature:44873-45003:-1:exon
so has part: feature:44200-44441:-1:exon
so has part: feature:42413-42627:-1:exon
so has part: feature:41248-41412:-1:exon
so has part: feature:41067-41165:-1:exon
so has part: feature:39496-39553:-1:exon
so has part: feature:38802-38976:-1:exon
so has part: feature:38300-38418:-1:exon
so has part: feature:37736-37834:-1:exon
so has part: feature:37314-37433:-1:exon
so has part: feature:36460-36564:-1:exon
so has part: feature:35297-35465:-1:exon
so has part: feature:34019-34214:-1:exon
so has part: feature:33171-33340:-1:exon
so has part: feature:32872-33003:-1:exon
so has part: feature:32668-32775:-1:exon
so has part: feature:31832-32016:-1:exon
so has part: feature:31071-31085:-1:exon
so has part: feature:29001-29134:-1:exon
so has part: feature:27860-27951:-1:exon

XP_032557391.1
type: Protein
SIO_000068: ncbiprotein

position:61953:-1
position: 61953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61908-61953:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53363-53457:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:51558-51689:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45959-46105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45330-45384:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44873-45003:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44200-44441:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:42413-42627:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:41248-41412:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:41067-41165:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:39496-39553:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:38802-38976:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:38300-38418:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:37736-37834:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:37314-37433:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:36460-36564:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:35297-35465:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:34019-34214:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:33171-33340:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:32872-33003:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:32668-32775:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:31832-32016:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:31071-31085:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:29001-29134:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:27860-27951:-1:exon

SLC12A4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SLC12A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 12 member 4 isoform X3
translation: MWKTVCMSEDGAYPGDFVLQNVNCPRVKLGQEFPRVAFRGHIRSLPKLMEITSSSRASHGNHKENSPFLNSAEAGKGGDYYDRNLALFEEELDIRPKVSSLLGKLVNYTNLTQGVKEHEEAESTDGSKKKVSKSPSMGTLMGVYLPCMQNIFGVILFLRLTWMVGMAGVLQSFLIVLLCCCCTMLTTISMSAIATNGVVPAGGSYFMISRSLGPEFGGAVGLCFYLGTTFAGAMYILGAIEILLTYIVPQAAIFHPSSAHDASNAMLNNMRVYGTVFLILMAVVVFVGVKYVNKFASLFLACVVISILSIYAGAIKSIFDPPEFPICMLGNRTLSRDHFDVCAKTIVKDNITVASKLWELFCHTTNLTEEHCDEYFLMNNVSEIAGIPGAASGILIDNLWSNYLEKGEILEKAHHPSVDVAGQKNNLHLYVLSDIATSFMVLVGIFFPSVTGIMAGSNRSGDLKDAQKSIPVGTILAIVTTSLVYFSCVLLFGACIEGVVLRDKYGDAVNKNLVVGTLSWPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAIAKDNIIPFLWIFGHGKANGEPTWALLLTALIAELGILIASLDMVAPILSMFFLMCYLFVNLACAVQTLLRTPNWRPRFKYYHWALSFLGMSICLALMFISSWYYALVAMLIAGMIYKYIEYQGAEKEWGDGIRGLSLSAARYALLRLEEGPPHTKNWRPQLLVLLKLDEDLHVKYPRLLTFASQLKAGKGLTIIGSVIQGNFLETYGEAQAAEQTIKNMMEIEKVKGFCQVVVANKVREGIAHLIQSCGLGGMKHNTVVLGWPYGWRQSEDPRSWKTFIGTVRCTTAAHLALLVPKNVSFYPSNHERYNEGNIDVWWIVHDGGMLMLLPFLLKQHKVWRKCKMRIFTVAQMDDNSIQMKKDLATFLYQLRIEAEVEVVEMHNSDISAYTYERTLMMEQRSQMLRQMRLTKTEREREAQLVKDRHSIARLESLYSDEEDEGDPVPENIQMTWTKEKCDAEKRNRGSAVGSFRDLISIKPNQSNVRRMHTAVKLNEVIVNRSHDARLVLLNMPGPPKNTDGDENYMEFLEVLTEGLERVLLVRGGGREVITIYS
SIO_010081: SLC12A4
subclass of: SO_0000673
so part of: SLC12A4
location: complement(join(27860..27951,29001..29134,31832..32016,32668..32775,32872..33003,33171..33340,34019..34214,35297..35465,36460..36564,37314..37433,37736..37834,38300..38418,38802..38976,39496..39553,41067..41165,41248..41412,42413..42627,44200..44441,44873..45003,45330..45384,45959..46105,51558..51689,53363..53457,56876..57047))
location: region:27860-57047:-1
so has part: feature:56876-57047:-1:exon
so has part: feature:53363-53457:-1:exon
so has part: feature:51558-51689:-1:exon
so has part: feature:45959-46105:-1:exon
so has part: feature:45330-45384:-1:exon
so has part: feature:44873-45003:-1:exon
so has part: feature:44200-44441:-1:exon
so has part: feature:42413-42627:-1:exon
so has part: feature:41248-41412:-1:exon
so has part: feature:41067-41165:-1:exon
so has part: feature:39496-39553:-1:exon
so has part: feature:38802-38976:-1:exon
so has part: feature:38300-38418:-1:exon
so has part: feature:37736-37834:-1:exon
so has part: feature:37314-37433:-1:exon
so has part: feature:36460-36564:-1:exon
so has part: feature:35297-35465:-1:exon
so has part: feature:34019-34214:-1:exon
so has part: feature:33171-33340:-1:exon
so has part: feature:32872-33003:-1:exon
so has part: feature:32668-32775:-1:exon
so has part: feature:31832-32016:-1:exon
so has part: feature:29001-29134:-1:exon
so has part: feature:27860-27951:-1:exon

XP_032557388.1
type: Protein
SIO_000068: ncbiprotein

position:57047:-1
position: 57047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56876-57047:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53363-53457:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:51558-51689:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45959-46105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45330-45384:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44873-45003:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44200-44441:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:42413-42627:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:41248-41412:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:41067-41165:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:39496-39553:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:38802-38976:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:38300-38418:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:37736-37834:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:37314-37433:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:36460-36564:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:35297-35465:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:34019-34214:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:33171-33340:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:32872-33003:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:32668-32775:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:31832-32016:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:29001-29134:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:27860-27951:-1:exon

SLC12A4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SLC12A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 12 member 4 isoform X2
translation: MWKTVCMSEDGAYPGDFVLQNVNCPRVKLGQEFPRVAFRGHIRSLPKLMEITSSSRASHGNHKENSPFLNSAEAGKGGDYYDRNLALFEEELDIRPKVSSLLGKLVNYTNLTQGVKEHEEAESTDGSKKKVSKSPSMGTLMGVYLPCMQNIFGVILFLRLTWMVGMAGVLQSFLIVLLCCCCTMLTTISMSAIATNGVVPAGGSYFMISRSLGPEFGGAVGLCFYLGTTFAGAMYILGAIEILLTYIVPQAAIFHPSSAHDASNAMLNNMRVYGTVFLILMAVVVFVGVKYVNKFASLFLACVVISILSIYAGAIKSIFDPPEFPICMLGNRTLSRDHFDVCAKTIVKDNITVASKLWELFCHTTNLTEEHCDEYFLMNNVSEIAGIPGAASGILIDNLWSNYLEKGEILEKAHHPSVDVAGQKNNLHLYVLSDIATSFMVLVGIFFPSVTGIMAGSNRSGDLKDAQKSIPVGTILAIVTTSLVYFSCVLLFGACIEGVVLRDKYGDAVNKNLVVGTLSWPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAIAKDNIIPFLWIFGHGKANGEPTWALLLTALIAELGILIASLDMVAPILSMFFLMCYLFVNLACAVQTLLRTPNWRPRFKYYHWALSFLGMSICLALMFISSWYYALVAMLIAGMIYKYIEYQGAEKEWGDGIRGLSLSAARYALLRLEEGPPHTKNWRPQLLVLLKLDEDLHVKYPRLLTFASQLKAGKGLTIIGSVIQGNFLETYGEAQAAEQTIKNMMEIEKVKGFCQVVVANKVREGIAHLIQSCGLGGMKHNTVVLGWPYGWRQSEDPRSWKTFIGTVRCTTAAHLALLVPKNVSFYPSNHERYNEGNIDVWWIVHDGGMLMLLPFLLKQHKVWRKCKMRIFTVAQMDDNSIQMKKDLATFLYQLRIEAEVEVVEMHNSDISAYTYERTLMMEQRSQMLRQMRLTKTEREREAQLVKDRHSIARLESLYSDEEDEGDPVPENIQMTWTKEKCDAEKRNRGSAVGSFRDLISIKPEWENLNQSNVRRMHTAVKLNEVIVNRSHDARLVLLNMPGPPKNTDGDENYMEFLEVLTEGLERVLLVRGGGREVITIYS
SIO_010081: SLC12A4
subclass of: SO_0000673
so part of: SLC12A4
location: complement(join(27860..27951,29001..29134,31071..31085,31832..32016,32668..32775,32872..33003,33171..33340,34019..34214,35297..35465,36460..36564,37314..37433,37736..37834,38300..38418,38802..38976,39496..39553,41067..41165,41248..41412,42413..42627,44200..44441,44873..45003,45330..45384,45959..46105,51558..51689,53363..53457,56876..57047))
location: region:27860-57047:-1
so has part: feature:56876-57047:-1:exon
so has part: feature:53363-53457:-1:exon
so has part: feature:51558-51689:-1:exon
so has part: feature:45959-46105:-1:exon
so has part: feature:45330-45384:-1:exon
so has part: feature:44873-45003:-1:exon
so has part: feature:44200-44441:-1:exon
so has part: feature:42413-42627:-1:exon
so has part: feature:41248-41412:-1:exon
so has part: feature:41067-41165:-1:exon
so has part: feature:39496-39553:-1:exon
so has part: feature:38802-38976:-1:exon
so has part: feature:38300-38418:-1:exon
so has part: feature:37736-37834:-1:exon
so has part: feature:37314-37433:-1:exon
so has part: feature:36460-36564:-1:exon
so has part: feature:35297-35465:-1:exon
so has part: feature:34019-34214:-1:exon
so has part: feature:33171-33340:-1:exon
so has part: feature:32872-33003:-1:exon
so has part: feature:32668-32775:-1:exon
so has part: feature:31832-32016:-1:exon
so has part: feature:31071-31085:-1:exon
so has part: feature:29001-29134:-1:exon
so has part: feature:27860-27951:-1:exon

XP_032557387.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56876-57047:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53363-53457:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:51558-51689:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45959-46105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45330-45384:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44873-45003:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44200-44441:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:42413-42627:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:41248-41412:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:41067-41165:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:39496-39553:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:38802-38976:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:38300-38418:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:37736-37834:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:37314-37433:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:36460-36564:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:35297-35465:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:34019-34214:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:33171-33340:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:32872-33003:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:32668-32775:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:31832-32016:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:31071-31085:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:29001-29134:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:27860-27951:-1:exon

LOC116793564
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793564
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 74714..81570
location: region:74714-81570:1
so has part: feature:74714-81570:1:exon
subclass of: SO_0000011

116793564
type: Gene
SIO_000068: ncbigene

position:74714:1
position: 74714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81570:1
position: 81570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74714-81570:1:exon

LOC116793564
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116793564
product: uncharacterized LOC116793564
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004359531.1
SIO_010081: LOC116793564
subclass of: SO_0000673
so part of: LOC116793564
location: join(74714..74895,76378..76615,80839..81570)
location: region:74714-81570:1
so has part: feature:74714-74895:1:exon
so has part: feature:76378-76615:1:exon
so has part: feature:80839-81570:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:74714-74895:1:exon

position:74895:1
position: 74895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:76378-76615:1:exon

position:76378:1
position: 76378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76615:1
position: 76615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:80839-81570:1:exon

position:80839:1
position: 80839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DDX28
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: DDX28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(84716..86841)
location: region:84716-86841:-1
so has part: feature:84716-86841:-1:exon
subclass of: SO_0000010

116793561
type: Gene
SIO_000068: ncbigene

position:84716:-1
position: 84716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86841:-1
position: 86841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84716-86841:-1:exon

DDX28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: DDX28
product: DEAD-box helicase 28
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032701501.1
SIO_010081: DDX28
subclass of: SO_0000673
so part of: DDX28
location: complement(84716..86841)
location: region:84716-86841:-1
so has part: feature:84716-86841:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:84716-86841:-1:exon

DDX28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: DDX28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent RNA helicase DDX28
translation: MALGRGGTAAALPLLLPRRPAGTGAAAAGAEPPGTVVRIPWALRVRLQRGAQRRRRGHGEAATAARPGKLLLRSRRPELSQPRWQTVGRWEQPPLVSAGWKHRKACGDYFQLEPSQEAAPALQAPPAEAGQGPTFAELGLQPALLAGLERLSIGRPTAVQRLAIPALRRGRSALCAAETGSGKTLAYLLPLLDGLLGRPEGPAAPAGPAAPRGLVVVPSRELAAQVGAVAAALCAPAGLAVRGLTGGGAAGGLRRQLRAPPPGPAVLLGTPGALREALRRRFLALARLRWMVLDEADTLMDDSFTELLEEILAHAPLAAGAPRPSGPAEERTQVVVVGATFPAGLSETLAKFTDVSRFVTLTTQSLHRLPPHVQQKFVRLKGRDKLPELLQLLKEHPSSGGAVLIFCNSASTVNWLGYILDDHRIRHLRLQGQMSAAARAGIFASFQRGDVSVLVCTDLASRGLDTSSVQLVVNYDFPDTLQDYLHRVGRVGRVGSKAPGAVVSFVTHRWDVDLVRKIETAARKRTGLPGMDSSINKPSPKGG
SIO_010081: DDX28
subclass of: SO_0000673
so part of: DDX28
location: complement(85210..86841)
location: region:85210-86841:-1
so has part: feature:85210-86841:-1:exon

XP_032557392.1
type: Protein
SIO_000068: ncbiprotein

position:85210:-1
position: 85210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85210-86841:-1:exon

DUS2
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: DUS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 86262..124068
location: region:86262-124068:1
so has part: feature:86262-124068:1:exon
subclass of: SO_0000010

116793562
type: Gene
SIO_000068: ncbigene

position:86262:1
position: 86262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124068:1
position: 124068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86262-124068:1:exon

DUS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: DUS2
product: dihydrouridine synthase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032701504.1
SIO_010081: DUS2
subclass of: SO_0000673
so part of: DUS2
location: join(86262..86280,87275..87414,88117..88162,89690..89781,90725..90768,91583..91643,92052..92099,93912..93977,95694..95764,96246..96332,96443..96611,97581..97702,100370..100513,100883..100970,101601..101674,102899..103401)
location: region:86262-103401:1
so has part: feature:86262-86280:1:exon
so has part: feature:87275-87414:1:exon
so has part: feature:88117-88162:1:exon
so has part: feature:89690-89781:1:exon
so has part: feature:90725-90768:1:exon
so has part: feature:91583-91643:1:exon
so has part: feature:92052-92099:1:exon
so has part: feature:93912-93977:1:exon
so has part: feature:95694-95764:1:exon
so has part: feature:96246-96332:1:exon
so has part: feature:96443-96611:1:exon
so has part: feature:97581-97702:1:exon
so has part: feature:100370-100513:1:exon
so has part: feature:100883-100970:1:exon
so has part: feature:101601-101674:1:exon
so has part: feature:102899-103401:1:exon

position:103401:1
position: 103401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86262-86280:1:exon

position:86280:1
position: 86280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:87275-87414:1:exon

position:87275:1
position: 87275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87414:1
position: 87414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:88117-88162:1:exon

position:88117:1
position: 88117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88162:1
position: 88162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:89690-89781:1:exon

position:89690:1
position: 89690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89781:1
position: 89781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:90725-90768:1:exon

position:90725:1
position: 90725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90768:1
position: 90768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:91583-91643:1:exon

position:91583:1
position: 91583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91643:1
position: 91643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:92052-92099:1:exon

position:92052:1
position: 92052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92099:1
position: 92099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:93912-93977:1:exon

position:93912:1
position: 93912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93977:1
position: 93977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:95694-95764:1:exon

position:95694:1
position: 95694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95764:1
position: 95764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:96246-96332:1:exon

position:96246:1
position: 96246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96332:1
position: 96332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:96443-96611:1:exon

position:96443:1
position: 96443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96611:1
position: 96611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:97581-97702:1:exon

position:97581:1
position: 97581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97702:1
position: 97702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:100370-100513:1:exon

position:100370:1
position: 100370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100513:1
position: 100513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:100883-100970:1:exon

position:100883:1
position: 100883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100970:1
position: 100970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:101601-101674:1:exon

position:101601:1
position: 101601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101674:1
position: 101674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:102899-103401:1:exon

position:102899:1
position: 102899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DUS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: DUS2
product: dihydrouridine synthase 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032701506.1
SIO_010081: DUS2
subclass of: SO_0000673
so part of: DUS2
location: join(86861..86949,87275..87414,88117..88162,89690..89781,90725..90768,91583..91643,92052..92099,93912..93977,95694..95764,96246..96332,96443..96611,97581..97702,100370..100513,100883..100970,101601..101674,121619..124068)
location: region:86861-124068:1
so has part: feature:86861-86949:1:exon
so has part: feature:87275-87414:1:exon
so has part: feature:88117-88162:1:exon
so has part: feature:89690-89781:1:exon
so has part: feature:90725-90768:1:exon
so has part: feature:91583-91643:1:exon
so has part: feature:92052-92099:1:exon
so has part: feature:93912-93977:1:exon
so has part: feature:95694-95764:1:exon
so has part: feature:96246-96332:1:exon
so has part: feature:96443-96611:1:exon
so has part: feature:97581-97702:1:exon
so has part: feature:100370-100513:1:exon
so has part: feature:100883-100970:1:exon
so has part: feature:101601-101674:1:exon
so has part: feature:121619-124068:1:exon

position:86861:1
position: 86861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86861-86949:1:exon

position:86949:1
position: 86949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:87275-87414:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88117-88162:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89690-89781:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:90725-90768:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91583-91643:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:92052-92099:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:93912-93977:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:95694-95764:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:96246-96332:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:96443-96611:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:97581-97702:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:100370-100513:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:100883-100970:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:101601-101674:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:121619-124068:1:exon

position:121619:1
position: 121619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DUS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: DUS2
product: dihydrouridine synthase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032701502.1
SIO_010081: DUS2
subclass of: SO_0000673
so part of: DUS2
location: join(86861..86949,87275..87414,88117..88162,89690..89781,90725..90768,91583..91643,92052..92099,93912..93977,95694..95764,96246..96332,96443..96611,97581..97702,100370..100513,100883..100970,101601..101674,102899..103401)
location: region:86861-103401:1
so has part: feature:86861-86949:1:exon
so has part: feature:87275-87414:1:exon
so has part: feature:88117-88162:1:exon
so has part: feature:89690-89781:1:exon
so has part: feature:90725-90768:1:exon
so has part: feature:91583-91643:1:exon
so has part: feature:92052-92099:1:exon
so has part: feature:93912-93977:1:exon
so has part: feature:95694-95764:1:exon
so has part: feature:96246-96332:1:exon
so has part: feature:96443-96611:1:exon
so has part: feature:97581-97702:1:exon
so has part: feature:100370-100513:1:exon
so has part: feature:100883-100970:1:exon
so has part: feature:101601-101674:1:exon
so has part: feature:102899-103401:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:86861-86949:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:87275-87414:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88117-88162:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89690-89781:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:90725-90768:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91583-91643:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:92052-92099:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:93912-93977:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:95694-95764:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:96246-96332:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:96443-96611:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:97581-97702:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:100370-100513:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:100883-100970:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:101601-101674:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:102899-103401:1:exon

DUS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: DUS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X4
translation: MTPWKSRFPRRSPPRGAAAEPRREGSTAIGMTVNPPLCFRGKKILAPMVRVGTLPMRLLALDYGADIVYCEELIDIKMLQCKRVINEVLETVDFVAPNERVVFRTCERERQRVVFQMGSADAERALAVAKLVESDVAGIDINMGCPKEYSTKGGMGAALLSDPDKIESILTALVKGVCKPVTCKIRILPSVEDTVNLVKRIEKTGIAAIAVHGRNKEERPQHPVHCDVIKAICEAVSIPVIANGGSHDFIKEYMDIETFQKATAASSVMIARAAMWNPSIFRKEGFFPLKDVMQDYLKYAVRYDNHYTNTKYCLCQMLREQLETAQGKKLHAAQSTQEICEVFEMGDFYEETRAIFEAKKMSLETETQDEDDQVDDPDVIKMAVRFDKREYPPQITPKMYLLEWCRKEKHPQPVYETFQRPLDRLFCSVVTVAEQKYRSTLW
SIO_010081: DUS2
subclass of: SO_0000673
so part of: DUS2
location: join(86877..86949,87275..87414,88117..88162,89690..89781,90725..90768,91583..91643,92052..92099,93912..93977,95694..95764,96246..96332,96443..96611,97581..97702,100370..100513,100883..100970,101601..101674,121619..121622)
location: region:86877-121622:1
so has part: feature:86877-86949:1:exon
so has part: feature:87275-87414:1:exon
so has part: feature:88117-88162:1:exon
so has part: feature:89690-89781:1:exon
so has part: feature:90725-90768:1:exon
so has part: feature:91583-91643:1:exon
so has part: feature:92052-92099:1:exon
so has part: feature:93912-93977:1:exon
so has part: feature:95694-95764:1:exon
so has part: feature:96246-96332:1:exon
so has part: feature:96443-96611:1:exon
so has part: feature:97581-97702:1:exon
so has part: feature:100370-100513:1:exon
so has part: feature:100883-100970:1:exon
so has part: feature:101601-101674:1:exon
so has part: feature:121619-121622:1:exon

XP_032557397.1
type: Protein
SIO_000068: ncbiprotein

position:86877:1
position: 86877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121622:1
position: 121622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86877-86949:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:87275-87414:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88117-88162:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89690-89781:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:90725-90768:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91583-91643:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:92052-92099:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:93912-93977:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:95694-95764:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:96246-96332:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:96443-96611:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:97581-97702:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:100370-100513:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:100883-100970:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:101601-101674:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:121619-121622:1:exon

DUS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: DUS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X1
translation: MTPWKSRFPRRSPPRGAAAEPRREGSTAIGMTVNPPLCFRGKKILAPMVRVGTLPMRLLALDYGADIVYCEELIDIKMLQCKRVINEVLETVDFVAPNERVVFRTCERERQRVVFQMGSADAERALAVAKLVESDVAGIDINMGCPKEYSTKGGMGAALLSDPDKIESILTALVKGVCKPVTCKIRILPSVEDTVNLVKRIEKTGIAAIAVHGRNKEERPQHPVHCDVIKAICEAVSIPVIANGGSHDFIKEYMDIETFQKATAASSVMIARAAMWNPSIFRKEGFFPLKDVMQDYLKYAVRYDNHYTNTKYCLCQMLREQLETAQGKKLHAAQSTQEICEVFEMGDFYEETRAIFEAKKMSLETETQDEDDQVDDPDVIKMAVRFDKREYPPQITPKMYLLEWCRKEKHPQPVYETFQRPLDRLFCSVVTVAEQKYRSTLWDKSKKLAEQAAAIVCLRTLGVPEGKLCEGENHLINKRKREDQEHLNNKDRGEDLAEPSHKKANFIEETSDRNVPKMPR
SIO_010081: DUS2
subclass of: SO_0000673
so part of: DUS2
location: join(86877..86949,87275..87414,88117..88162,89690..89781,90725..90768,91583..91643,92052..92099,93912..93977,95694..95764,96246..96332,96443..96611,97581..97702,100370..100513,100883..100970,101601..101674,102899..103136)
location: region:86877-103136:1
so has part: feature:86877-86949:1:exon
so has part: feature:87275-87414:1:exon
so has part: feature:88117-88162:1:exon
so has part: feature:89690-89781:1:exon
so has part: feature:90725-90768:1:exon
so has part: feature:91583-91643:1:exon
so has part: feature:92052-92099:1:exon
so has part: feature:93912-93977:1:exon
so has part: feature:95694-95764:1:exon
so has part: feature:96246-96332:1:exon
so has part: feature:96443-96611:1:exon
so has part: feature:97581-97702:1:exon
so has part: feature:100370-100513:1:exon
so has part: feature:100883-100970:1:exon
so has part: feature:101601-101674:1:exon
so has part: feature:102899-103136:1:exon

XP_032557393.1
type: Protein
SIO_000068: ncbiprotein

position:103136:1
position: 103136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86877-86949:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:87275-87414:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88117-88162:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89690-89781:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:90725-90768:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91583-91643:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:92052-92099:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:93912-93977:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:95694-95764:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:96246-96332:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:96443-96611:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:97581-97702:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:100370-100513:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:100883-100970:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:101601-101674:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:102899-103136:1:exon

DUS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: DUS2
product: dihydrouridine synthase 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032701507.1
SIO_010081: DUS2
subclass of: SO_0000673
so part of: DUS2
location: join(87022..87130,87275..87414,88117..88162,89690..89781,90725..90768,91583..91643,92052..92099,93912..93977,95694..95764,96246..96332,96443..96611,97581..97702,100370..100513,100883..100970,101601..101674,102899..103401)
location: region:87022-103401:1
so has part: feature:87022-87130:1:exon
so has part: feature:87275-87414:1:exon
so has part: feature:88117-88162:1:exon
so has part: feature:89690-89781:1:exon
so has part: feature:90725-90768:1:exon
so has part: feature:91583-91643:1:exon
so has part: feature:92052-92099:1:exon
so has part: feature:93912-93977:1:exon
so has part: feature:95694-95764:1:exon
so has part: feature:96246-96332:1:exon
so has part: feature:96443-96611:1:exon
so has part: feature:97581-97702:1:exon
so has part: feature:100370-100513:1:exon
so has part: feature:100883-100970:1:exon
so has part: feature:101601-101674:1:exon
so has part: feature:102899-103401:1:exon

position:87022:1
position: 87022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87022-87130:1:exon

position:87130:1
position: 87130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:87275-87414:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88117-88162:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89690-89781:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:90725-90768:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91583-91643:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:92052-92099:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:93912-93977:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:95694-95764:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:96246-96332:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:96443-96611:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:97581-97702:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:100370-100513:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:100883-100970:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:101601-101674:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:102899-103401:1:exon

DUS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: DUS2
product: dihydrouridine synthase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032701503.1
SIO_010081: DUS2
subclass of: SO_0000673
so part of: DUS2
location: join(87076..87168,87275..87414,88117..88162,89690..89781,90725..90768,91583..91643,92052..92099,93912..93977,95694..95764,96246..96332,96443..96611,97581..97702,100370..100513,100883..100970,101601..101674,102899..103401)
location: region:87076-103401:1
so has part: feature:87076-87168:1:exon
so has part: feature:87275-87414:1:exon
so has part: feature:88117-88162:1:exon
so has part: feature:89690-89781:1:exon
so has part: feature:90725-90768:1:exon
so has part: feature:91583-91643:1:exon
so has part: feature:92052-92099:1:exon
so has part: feature:93912-93977:1:exon
so has part: feature:95694-95764:1:exon
so has part: feature:96246-96332:1:exon
so has part: feature:96443-96611:1:exon
so has part: feature:97581-97702:1:exon
so has part: feature:100370-100513:1:exon
so has part: feature:100883-100970:1:exon
so has part: feature:101601-101674:1:exon
so has part: feature:102899-103401:1:exon

position:87076:1
position: 87076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87076-87168:1:exon

position:87168:1
position: 87168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:87275-87414:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88117-88162:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89690-89781:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:90725-90768:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91583-91643:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:92052-92099:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:93912-93977:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:95694-95764:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:96246-96332:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:96443-96611:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:97581-97702:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:100370-100513:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:100883-100970:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:101601-101674:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:102899-103401:1:exon

DUS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: DUS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X2
translation: MTVNPPLCFRGKKILAPMVRVGTLPMRLLALDYGADIVYCEELIDIKMLQCKRVINEVLETVDFVAPNERVVFRTCERERQRVVFQMGSADAERALAVAKLVESDVAGIDINMGCPKEYSTKGGMGAALLSDPDKIESILTALVKGVCKPVTCKIRILPSVEDTVNLVKRIEKTGIAAIAVHGRNKEERPQHPVHCDVIKAICEAVSIPVIANGGSHDFIKEYMDIETFQKATAASSVMIARAAMWNPSIFRKEGFFPLKDVMQDYLKYAVRYDNHYTNTKYCLCQMLREQLETAQGKKLHAAQSTQEICEVFEMGDFYEETRAIFEAKKMSLETETQDEDDQVDDPDVIKMAVRFDKREYPPQITPKMYLLEWCRKEKHPQPVYETFQRPLDRLFCSVVTVAEQKYRSTLWDKSKKLAEQAAAIVCLRTLGVPEGKLCEGENHLINKRKREDQEHLNNKDRGEDLAEPSHKKANFIEETSDRNVPKMPR
SIO_010081: DUS2
subclass of: SO_0000673
so part of: DUS2
location: join(87292..87414,88117..88162,89690..89781,90725..90768,91583..91643,92052..92099,93912..93977,95694..95764,96246..96332,96443..96611,97581..97702,100370..100513,100883..100970,101601..101674,102899..103136)
location: region:87292-103136:1
so has part: feature:87292-87414:1:exon
so has part: feature:88117-88162:1:exon
so has part: feature:89690-89781:1:exon
so has part: feature:90725-90768:1:exon
so has part: feature:91583-91643:1:exon
so has part: feature:92052-92099:1:exon
so has part: feature:93912-93977:1:exon
so has part: feature:95694-95764:1:exon
so has part: feature:96246-96332:1:exon
so has part: feature:96443-96611:1:exon
so has part: feature:97581-97702:1:exon
so has part: feature:100370-100513:1:exon
so has part: feature:100883-100970:1:exon
so has part: feature:101601-101674:1:exon
so has part: feature:102899-103136:1:exon

XP_032557394.1
type: Protein
SIO_000068: ncbiprotein

position:87292:1
position: 87292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87292-87414:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:88117-88162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:89690-89781:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:90725-90768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:91583-91643:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92052-92099:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93912-93977:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:95694-95764:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:96246-96332:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:96443-96611:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:97581-97702:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:100370-100513:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:100883-100970:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:101601-101674:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:102899-103136:1:exon

DUS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: DUS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X2
translation: MTVNPPLCFRGKKILAPMVRVGTLPMRLLALDYGADIVYCEELIDIKMLQCKRVINEVLETVDFVAPNERVVFRTCERERQRVVFQMGSADAERALAVAKLVESDVAGIDINMGCPKEYSTKGGMGAALLSDPDKIESILTALVKGVCKPVTCKIRILPSVEDTVNLVKRIEKTGIAAIAVHGRNKEERPQHPVHCDVIKAICEAVSIPVIANGGSHDFIKEYMDIETFQKATAASSVMIARAAMWNPSIFRKEGFFPLKDVMQDYLKYAVRYDNHYTNTKYCLCQMLREQLETAQGKKLHAAQSTQEICEVFEMGDFYEETRAIFEAKKMSLETETQDEDDQVDDPDVIKMAVRFDKREYPPQITPKMYLLEWCRKEKHPQPVYETFQRPLDRLFCSVVTVAEQKYRSTLWDKSKKLAEQAAAIVCLRTLGVPEGKLCEGENHLINKRKREDQEHLNNKDRGEDLAEPSHKKANFIEETSDRNVPKMPR
SIO_010081: DUS2
subclass of: SO_0000673
so part of: DUS2
location: join(87292..87414,88117..88162,89690..89781,90725..90768,91583..91643,92052..92099,93912..93977,95694..95764,96246..96332,96443..96611,97581..97702,100370..100513,100883..100970,101601..101674,102899..103136)
location: region:87292-103136:1
so has part: feature:87292-87414:1:exon
so has part: feature:88117-88162:1:exon
so has part: feature:89690-89781:1:exon
so has part: feature:90725-90768:1:exon
so has part: feature:91583-91643:1:exon
so has part: feature:92052-92099:1:exon
so has part: feature:93912-93977:1:exon
so has part: feature:95694-95764:1:exon
so has part: feature:96246-96332:1:exon
so has part: feature:96443-96611:1:exon
so has part: feature:97581-97702:1:exon
so has part: feature:100370-100513:1:exon
so has part: feature:100883-100970:1:exon
so has part: feature:101601-101674:1:exon
so has part: feature:102899-103136:1:exon

XP_032557395.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87292-87414:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:88117-88162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:89690-89781:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:90725-90768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:91583-91643:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92052-92099:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93912-93977:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:95694-95764:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:96246-96332:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:96443-96611:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:97581-97702:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:100370-100513:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:100883-100970:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:101601-101674:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:102899-103136:1:exon

DUS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: DUS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X2
translation: MTVNPPLCFRGKKILAPMVRVGTLPMRLLALDYGADIVYCEELIDIKMLQCKRVINEVLETVDFVAPNERVVFRTCERERQRVVFQMGSADAERALAVAKLVESDVAGIDINMGCPKEYSTKGGMGAALLSDPDKIESILTALVKGVCKPVTCKIRILPSVEDTVNLVKRIEKTGIAAIAVHGRNKEERPQHPVHCDVIKAICEAVSIPVIANGGSHDFIKEYMDIETFQKATAASSVMIARAAMWNPSIFRKEGFFPLKDVMQDYLKYAVRYDNHYTNTKYCLCQMLREQLETAQGKKLHAAQSTQEICEVFEMGDFYEETRAIFEAKKMSLETETQDEDDQVDDPDVIKMAVRFDKREYPPQITPKMYLLEWCRKEKHPQPVYETFQRPLDRLFCSVVTVAEQKYRSTLWDKSKKLAEQAAAIVCLRTLGVPEGKLCEGENHLINKRKREDQEHLNNKDRGEDLAEPSHKKANFIEETSDRNVPKMPR
SIO_010081: DUS2
subclass of: SO_0000673
so part of: DUS2
location: join(87292..87414,88117..88162,89690..89781,90725..90768,91583..91643,92052..92099,93912..93977,95694..95764,96246..96332,96443..96611,97581..97702,100370..100513,100883..100970,101601..101674,102899..103136)
location: region:87292-103136:1
so has part: feature:87292-87414:1:exon
so has part: feature:88117-88162:1:exon
so has part: feature:89690-89781:1:exon
so has part: feature:90725-90768:1:exon
so has part: feature:91583-91643:1:exon
so has part: feature:92052-92099:1:exon
so has part: feature:93912-93977:1:exon
so has part: feature:95694-95764:1:exon
so has part: feature:96246-96332:1:exon
so has part: feature:96443-96611:1:exon
so has part: feature:97581-97702:1:exon
so has part: feature:100370-100513:1:exon
so has part: feature:100883-100970:1:exon
so has part: feature:101601-101674:1:exon
so has part: feature:102899-103136:1:exon

XP_032557398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87292-87414:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:88117-88162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:89690-89781:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:90725-90768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:91583-91643:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92052-92099:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93912-93977:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:95694-95764:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:96246-96332:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:96443-96611:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:97581-97702:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:100370-100513:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:100883-100970:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:101601-101674:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:102899-103136:1:exon

DUS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: DUS2
product: dihydrouridine synthase 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032701505.1
SIO_010081: DUS2
subclass of: SO_0000673
so part of: DUS2
location: join(87806..87893,88117..88162,89690..89781,90725..90768,91583..91643,92052..92099,93912..93977,95694..95764,96246..96332,96443..96611,97581..97702,100370..100513,100883..100970,101601..101674,102899..103401)
location: region:87806-103401:1
so has part: feature:87806-87893:1:exon
so has part: feature:88117-88162:1:exon
so has part: feature:89690-89781:1:exon
so has part: feature:90725-90768:1:exon
so has part: feature:91583-91643:1:exon
so has part: feature:92052-92099:1:exon
so has part: feature:93912-93977:1:exon
so has part: feature:95694-95764:1:exon
so has part: feature:96246-96332:1:exon
so has part: feature:96443-96611:1:exon
so has part: feature:97581-97702:1:exon
so has part: feature:100370-100513:1:exon
so has part: feature:100883-100970:1:exon
so has part: feature:101601-101674:1:exon
so has part: feature:102899-103401:1:exon

position:87806:1
position: 87806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87806-87893:1:exon

position:87893:1
position: 87893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:88117-88162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:89690-89781:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:90725-90768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:91583-91643:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92052-92099:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93912-93977:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:95694-95764:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:96246-96332:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:96443-96611:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:97581-97702:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:100370-100513:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:100883-100970:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:101601-101674:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:102899-103401:1:exon

DUS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: DUS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X3
translation: MLQCKRVINEVLETVDFVAPNERVVFRTCERERQRVVFQMGSADAERALAVAKLVESDVAGIDINMGCPKEYSTKGGMGAALLSDPDKIESILTALVKGVCKPVTCKIRILPSVEDTVNLVKRIEKTGIAAIAVHGRNKEERPQHPVHCDVIKAICEAVSIPVIANGGSHDFIKEYMDIETFQKATAASSVMIARAAMWNPSIFRKEGFFPLKDVMQDYLKYAVRYDNHYTNTKYCLCQMLREQLETAQGKKLHAAQSTQEICEVFEMGDFYEETRAIFEAKKMSLETETQDEDDQVDDPDVIKMAVRFDKREYPPQITPKMYLLEWCRKEKHPQPVYETFQRPLDRLFCSVVTVAEQKYRSTLWDKSKKLAEQAAAIVCLRTLGVPEGKLCEGENHLINKRKREDQEHLNNKDRGEDLAEPSHKKANFIEETSDRNVPKMPR
SIO_010081: DUS2
subclass of: SO_0000673
so part of: DUS2
location: join(88135..88162,89690..89781,90725..90768,91583..91643,92052..92099,93912..93977,95694..95764,96246..96332,96443..96611,97581..97702,100370..100513,100883..100970,101601..101674,102899..103136)
location: region:88135-103136:1
so has part: feature:88135-88162:1:exon
so has part: feature:89690-89781:1:exon
so has part: feature:90725-90768:1:exon
so has part: feature:91583-91643:1:exon
so has part: feature:92052-92099:1:exon
so has part: feature:93912-93977:1:exon
so has part: feature:95694-95764:1:exon
so has part: feature:96246-96332:1:exon
so has part: feature:96443-96611:1:exon
so has part: feature:97581-97702:1:exon
so has part: feature:100370-100513:1:exon
so has part: feature:100883-100970:1:exon
so has part: feature:101601-101674:1:exon
so has part: feature:102899-103136:1:exon

XP_032557396.1
type: Protein
SIO_000068: ncbiprotein

position:88135:1
position: 88135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88135-88162:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:89690-89781:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90725-90768:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91583-91643:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:92052-92099:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:93912-93977:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:95694-95764:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:96246-96332:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:96443-96611:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:97581-97702:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:100370-100513:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:100883-100970:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:101601-101674:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:102899-103136:1:exon

NFATC3
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: NFATC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 131461..197689
location: region:131461-197689:1
so has part: feature:131461-197689:1:exon
subclass of: SO_0000010

116793292
type: Gene
SIO_000068: ncbigene

position:131461:1
position: 131461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197689:1
position: 197689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131461-197689:1:exon

NFATC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: NFATC3
product: nuclear factor of activated T cells 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 1 long SRA read, 32 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032701032.1
SIO_010081: NFATC3
subclass of: SO_0000673
so part of: NFATC3
location: join(131461..131741,147287..148418,157151..157313,172053..172252,172913..173085,173829..173969,174780..174835,175474..175600,177408..178452,194403..197689)
location: region:131461-197689:1
so has part: feature:131461-131741:1:exon
so has part: feature:147287-148418:1:exon
so has part: feature:157151-157313:1:exon
so has part: feature:172053-172252:1:exon
so has part: feature:172913-173085:1:exon
so has part: feature:173829-173969:1:exon
so has part: feature:174780-174835:1:exon
so has part: feature:175474-175600:1:exon
so has part: feature:177408-178452:1:exon
so has part: feature:194403-197689:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:131461-131741:1:exon

position:131741:1
position: 131741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:147287-148418:1:exon

position:147287:1
position: 147287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148418:1
position: 148418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:157151-157313:1:exon

position:157151:1
position: 157151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157313:1
position: 157313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:172053-172252:1:exon

position:172053:1
position: 172053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172252:1
position: 172252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:172913-173085:1:exon

position:172913:1
position: 172913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173085:1
position: 173085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:173829-173969:1:exon

position:173829:1
position: 173829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173969:1
position: 173969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:174780-174835:1:exon

position:174780:1
position: 174780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174835:1
position: 174835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:175474-175600:1:exon

position:175474:1
position: 175474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175600:1
position: 175600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:177408-178452:1:exon

position:177408:1
position: 177408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178452:1
position: 178452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:194403-197689:1:exon

position:194403:1
position: 194403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NFATC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: NFATC3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: nuclear factor of activated T-cells, cytoplasmic 3
translation: MTTANCGATDEFDFRLIFGEDGQPGPGPPLGPADLESDDCASIYIFNVDQPSSSVNQPICIPRHGLQSHSSPLTPPTRLQSHKNYEGTCEVPESKYSPLGGPKPFECPSIQITSISPNCHQGIEANEDELHTNGTENDYMERPSRDHLYLPLEPSYRESSLSPSPASSISSRSWFSDASSCESISHVYDDVDSELNEAAARFTLGSPLASPGGSPRGPSDESWQQPYGFGHSLSPRQSPCHSPRTSITDENWLSPRPTSRPSSRPTSPCGKRRHSSAEICYAGSLSPHHSPTPSPGHSPRGSITEDTWLNTSIHNVQGLNSGLSPFQCCTETDIPLKTRKTSEDQTATLSGKVDICPEEQGNLSSSLETAVDDCSGSQHTLKKDLPGDQFLSVPSHFTWNKPKPGHTPIFRTSSLPPLDWPLPSHYGQCELKIEVQPKTHHRAHYETEGSRGAVKASTGGHPVVKLLGYSEKPVNLQMFIGTADDRYLRPHAFYQVHRITGKTVATASQEIIIASTKVLEIPLLPENNMSASIDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHIPQPSGKVLSLQTASIPVECSQRSAQELPQIEKYSINSCSVNGGHEMVVTGSNFLAESKIIFFEKGQDGRPQWEVEGKIIREKCQGANIVLEVPPYHNKTITAAVQVQFYLCNGKRKKSQSQRFTYTPVIMKQEHRDEVDLSAVPSLALPHTSNVQGLHSIRTQLPSPEQGHPHDNLLSTSPRSLVCPVQAPYTAMVTSAVSHLPHMQGRNLSPSEECHVLPPAVVQSFQVTSAPSVRPSYPPMQSNNVYNGQSGLPMNSASSQGFDAISFPQDTAVPHLINLGCQALPPVQFHSSNPGSVSTSSTAGHPLAHSAHSGESSAHLPSMGYHCPSTGQGSIPSAMGLSLGQSSPSCSKSHTILQIRHPLHPPSPTASHPLVHSPLSGPSSPQLQPLPYQSPSSGHHLLPPTTSHSGQHSPSPQPCPGALSAVSPLGHHSVCDSSPFAPDGAAINIKPEPEDRELNFQTIGLQDITLDDVNEIIGRDMSQISVSHGTAVASQPARACPGSLETRISDGIQ
SIO_010081: NFATC3
subclass of: SO_0000673
so part of: NFATC3
location: join(131642..131741,147287..148418,157151..157313,172053..172252,172913..173085,173829..173969,174780..174835,175474..175600,177408..178452,194403..194527)
location: region:131642-194527:1
so has part: feature:131642-131741:1:exon
so has part: feature:147287-148418:1:exon
so has part: feature:157151-157313:1:exon
so has part: feature:172053-172252:1:exon
so has part: feature:172913-173085:1:exon
so has part: feature:173829-173969:1:exon
so has part: feature:174780-174835:1:exon
so has part: feature:175474-175600:1:exon
so has part: feature:177408-178452:1:exon
so has part: feature:194403-194527:1:exon

XP_032556923.1
type: Protein
SIO_000068: ncbiprotein

position:131642:1
position: 131642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194527:1
position: 194527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131642-131741:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147287-148418:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:157151-157313:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:172053-172252:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:172913-173085:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:173829-173969:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:174780-174835:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:175474-175600:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:177408-178452:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:194403-194527:1:exon

LOC116793293
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793293
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(189577..198589)
location: region:189577-198589:-1
so has part: feature:189577-198589:-1:exon
subclass of: SO_0000011

116793293
type: Gene
SIO_000068: ncbigene

position:189577:-1
position: 189577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198589:-1
position: 198589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189577-198589:-1:exon

LOC116793293
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116793293
product: uncharacterized LOC116793293
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004359438.1
SIO_010081: LOC116793293
subclass of: SO_0000673
so part of: LOC116793293
location: complement(join(189577..190319,191605..191701,198455..198589))
location: region:189577-198589:-1
so has part: feature:198455-198589:-1:exon
so has part: feature:191605-191701:-1:exon
so has part: feature:189577-190319:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:198455-198589:-1:exon

position:198455:-1
position: 198455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:191605-191701:-1:exon

position:191605:-1
position: 191605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191701:-1
position: 191701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:189577-190319:-1:exon

position:190319:-1
position: 190319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ESRP2
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: ESRP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(216927..259980)
location: region:216927-259980:-1
so has part: feature:216927-259980:-1:exon
subclass of: SO_0000010

116793450
type: Gene
SIO_000068: ncbigene

position:216927:-1
position: 216927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259980:-1
position: 259980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216927-259980:-1:exon

ESRP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ESRP2
product: epithelial splicing regulatory protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 11 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032701316.1
SIO_010081: ESRP2
subclass of: SO_0000673
so part of: ESRP2
location: complement(join(216927..218321,221189..221300,228991..229168,230191..230383,231613..231799,233086..233307,234025..234326,234816..234858,235065..235197,236029..236139,236940..236994,237105..237203,237909..238023,239787..239900,258158..258286,259225..259377,259613..259980))
location: region:216927-259980:-1
so has part: feature:259613-259980:-1:exon
so has part: feature:259225-259377:-1:exon
so has part: feature:258158-258286:-1:exon
so has part: feature:239787-239900:-1:exon
so has part: feature:237909-238023:-1:exon
so has part: feature:237105-237203:-1:exon
so has part: feature:236940-236994:-1:exon
so has part: feature:236029-236139:-1:exon
so has part: feature:235065-235197:-1:exon
so has part: feature:234816-234858:-1:exon
so has part: feature:234025-234326:-1:exon
so has part: feature:233086-233307:-1:exon
so has part: feature:231613-231799:-1:exon
so has part: feature:230191-230383:-1:exon
so has part: feature:228991-229168:-1:exon
so has part: feature:221189-221300:-1:exon
so has part: feature:216927-218321:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:259613-259980:-1:exon

position:259613:-1
position: 259613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:259225-259377:-1:exon

position:259225:-1
position: 259225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259377:-1
position: 259377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:258158-258286:-1:exon

position:258158:-1
position: 258158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258286:-1
position: 258286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:239787-239900:-1:exon

position:239787:-1
position: 239787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239900:-1
position: 239900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:237909-238023:-1:exon

position:237909:-1
position: 237909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238023:-1
position: 238023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:237105-237203:-1:exon

position:237105:-1
position: 237105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237203:-1
position: 237203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:236940-236994:-1:exon

position:236940:-1
position: 236940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236994:-1
position: 236994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:236029-236139:-1:exon

position:236029:-1
position: 236029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236139:-1
position: 236139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:235065-235197:-1:exon

position:235065:-1
position: 235065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235197:-1
position: 235197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:234816-234858:-1:exon

position:234816:-1
position: 234816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234858:-1
position: 234858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:234025-234326:-1:exon

position:234025:-1
position: 234025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234326:-1
position: 234326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:233086-233307:-1:exon

position:233086:-1
position: 233086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233307:-1
position: 233307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:231613-231799:-1:exon

position:231613:-1
position: 231613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231799:-1
position: 231799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:230191-230383:-1:exon

position:230191:-1
position: 230191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230383:-1
position: 230383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:228991-229168:-1:exon

position:228991:-1
position: 228991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229168:-1
position: 229168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:221189-221300:-1:exon

position:221189:-1
position: 221189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221300:-1
position: 221300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:216927-218321:-1:exon

position:218321:-1
position: 218321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ESRP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ESRP2
product: epithelial splicing regulatory protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032701314.1
SIO_010081: ESRP2
subclass of: SO_0000673
so part of: ESRP2
location: complement(join(216927..218321,228991..229168,230191..230383,231601..231799,233086..233307,234025..234326,234816..234858,235065..235197,236029..236139,236940..236994,237105..237203,237909..238023,239787..239900,258158..258286,259225..259377,259613..259979))
location: region:216927-259979:-1
so has part: feature:259613-259979:-1:exon
so has part: feature:259225-259377:-1:exon
so has part: feature:258158-258286:-1:exon
so has part: feature:239787-239900:-1:exon
so has part: feature:237909-238023:-1:exon
so has part: feature:237105-237203:-1:exon
so has part: feature:236940-236994:-1:exon
so has part: feature:236029-236139:-1:exon
so has part: feature:235065-235197:-1:exon
so has part: feature:234816-234858:-1:exon
so has part: feature:234025-234326:-1:exon
so has part: feature:233086-233307:-1:exon
so has part: feature:231601-231799:-1:exon
so has part: feature:230191-230383:-1:exon
so has part: feature:228991-229168:-1:exon
so has part: feature:216927-218321:-1:exon

position:259979:-1
position: 259979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259613-259979:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:259225-259377:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:258158-258286:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:239787-239900:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:237909-238023:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:237105-237203:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:236940-236994:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:236029-236139:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:235065-235197:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:234816-234858:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:234025-234326:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:233086-233307:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:231601-231799:-1:exon

position:231601:-1
position: 231601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:230191-230383:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:228991-229168:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:216927-218321:-1:exon

ESRP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ESRP2
product: epithelial splicing regulatory protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032701315.1
SIO_010081: ESRP2
subclass of: SO_0000673
so part of: ESRP2
location: complement(join(216927..218321,221189..221300,228991..229168,230191..230383,231601..231799,233086..233307,234025..234326,234816..234858,235065..235197,236029..236139,236940..236994,237111..237203,237909..238023,239787..239900,258158..258286,259225..259377,259613..259978))
location: region:216927-259978:-1
so has part: feature:259613-259978:-1:exon
so has part: feature:259225-259377:-1:exon
so has part: feature:258158-258286:-1:exon
so has part: feature:239787-239900:-1:exon
so has part: feature:237909-238023:-1:exon
so has part: feature:237111-237203:-1:exon
so has part: feature:236940-236994:-1:exon
so has part: feature:236029-236139:-1:exon
so has part: feature:235065-235197:-1:exon
so has part: feature:234816-234858:-1:exon
so has part: feature:234025-234326:-1:exon
so has part: feature:233086-233307:-1:exon
so has part: feature:231601-231799:-1:exon
so has part: feature:230191-230383:-1:exon
so has part: feature:228991-229168:-1:exon
so has part: feature:221189-221300:-1:exon
so has part: feature:216927-218321:-1:exon

position:259978:-1
position: 259978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259613-259978:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:259225-259377:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:258158-258286:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:239787-239900:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:237909-238023:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:237111-237203:-1:exon

position:237111:-1
position: 237111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:236940-236994:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:236029-236139:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:235065-235197:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:234816-234858:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:234025-234326:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:233086-233307:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:231601-231799:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:230191-230383:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:228991-229168:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:221189-221300:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:216927-218321:-1:exon

ESRP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ESRP2
product: epithelial splicing regulatory protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032701313.1
SIO_010081: ESRP2
subclass of: SO_0000673
so part of: ESRP2
location: complement(join(216927..218321,221189..221300,228991..229168,230191..230383,231601..231799,233086..233307,234025..234326,234816..234858,235065..235197,236029..236139,236940..236994,237105..237203,237909..238023,239787..239900,258158..258286,259225..259377,259613..259978))
location: region:216927-259978:-1
so has part: feature:259613-259978:-1:exon
so has part: feature:259225-259377:-1:exon
so has part: feature:258158-258286:-1:exon
so has part: feature:239787-239900:-1:exon
so has part: feature:237909-238023:-1:exon
so has part: feature:237105-237203:-1:exon
so has part: feature:236940-236994:-1:exon
so has part: feature:236029-236139:-1:exon
so has part: feature:235065-235197:-1:exon
so has part: feature:234816-234858:-1:exon
so has part: feature:234025-234326:-1:exon
so has part: feature:233086-233307:-1:exon
so has part: feature:231601-231799:-1:exon
so has part: feature:230191-230383:-1:exon
so has part: feature:228991-229168:-1:exon
so has part: feature:221189-221300:-1:exon
so has part: feature:216927-218321:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:259613-259978:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:259225-259377:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:258158-258286:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:239787-239900:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:237909-238023:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:237105-237203:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:236940-236994:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:236029-236139:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:235065-235197:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:234816-234858:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:234025-234326:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:233086-233307:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:231601-231799:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:230191-230383:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:228991-229168:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:221189-221300:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:216927-218321:-1:exon

ESRP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ESRP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epithelial splicing regulatory protein 2 isoform X2
translation: MTASHSDSLVVLFGATAGAYGAKLGSDERELILLVWQVVDLHSKKVGTLHKSLVKADNLDLSDQCREVSALTPEGLSKAEPLDRVLQQFSQLVSSDLKVLGRSSYTLCSDGQLLIRQVLHPETSKKNLLLSDCFYSFYDLRKEFRSCYPSSAAGKDQTIKTMAEYLGLGTDEAEEDFGVWQVKTMVAIIFSMLSEGCNHVFTEPETVKHKYETGPCSKSETVDSETVIRARGLPWQSSDQDIARFFKGLNIAKGGVALCLNSQGRRNGEALVRFVSSEQRDLALERHKHHMGSRYIEVYKATGEEFLKIAGGTSNEVAQFLSKENQVIIRMRGLPFTATQEDVLGFLGPECPVTGGKEGLLFVKYPDGRPTGDAFVLFSCEEYAQSALKKHKEILGKRYIELFRSTAAEVQQVLNRYMSTPLIPTLPTPIIPVIPPPYAIATGSVRDCVRLRGLPYTAGIDDILEFMGDATGDIKPHGVHMVLNQQGRPSGDAFIQMKSADKAFMVAQKCHKKMMKDRYVEVFQCSGEEMNFVLMGGTLNRSGLSPPPCKLPCLSPPAYAAFQTAAVIPAEAALYQPQALLPTTRTPQASAAAPPAVTYYPAQAAQLYMNYTAYYPSPPVSPTTVGYIAAPPGAVAAAATATHTPILPQPGALVRMQGLPYNTGMKEILSFFQGYQLQADSILMLYSFSGQPWRGIGDFFQAWI
SIO_010081: ESRP2
subclass of: SO_0000673
so part of: ESRP2
location: complement(join(218235..218321,228991..229168,230191..230383,231601..231799,233086..233307,234025..234326,234816..234858,235065..235197,236029..236139,236940..236994,237105..237203,237909..238023,239787..239900,258158..258286,259225..259359))
location: region:218235-259359:-1
so has part: feature:259225-259359:-1:exon
so has part: feature:258158-258286:-1:exon
so has part: feature:239787-239900:-1:exon
so has part: feature:237909-238023:-1:exon
so has part: feature:237105-237203:-1:exon
so has part: feature:236940-236994:-1:exon
so has part: feature:236029-236139:-1:exon
so has part: feature:235065-235197:-1:exon
so has part: feature:234816-234858:-1:exon
so has part: feature:234025-234326:-1:exon
so has part: feature:233086-233307:-1:exon
so has part: feature:231601-231799:-1:exon
so has part: feature:230191-230383:-1:exon
so has part: feature:228991-229168:-1:exon
so has part: feature:218235-218321:-1:exon

XP_032557205.1
type: Protein
SIO_000068: ncbiprotein

position:218235:-1
position: 218235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259359:-1
position: 259359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259225-259359:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:258158-258286:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:239787-239900:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237909-238023:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:237105-237203:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:236940-236994:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:236029-236139:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:235065-235197:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:234816-234858:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:234025-234326:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:233086-233307:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:231601-231799:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:230191-230383:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:228991-229168:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:218235-218321:-1:exon

ESRP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ESRP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epithelial splicing regulatory protein 2 isoform X3
translation: MTASHSDSLVVLFGATAGAYGAKLGSDERELILLVWQVVDLHSKKVGTLHKSLVKADNLDLSDQCREVSALTPEGLSKAEPLDRVLQQFSQLVSSDLKVLGRSSYTLCSDGQLLIRQVLHPETSKKNLLLSDCFYSFYDLRKEFRSCYPSSAAGKDQTIKTMAEYLGLGTDEAEEDFGVWQVKTMVAIIFSMLSEDHVFTEPETVKHKYETGPCSKSETVDSETVIRARGLPWQSSDQDIARFFKGLNIAKGGVALCLNSQGRRNGEALVRFVSSEQRDLALERHKHHMGSRYIEVYKATGEEFLKIAGGTSNEVAQFLSKENQVIIRMRGLPFTATQEDVLGFLGPECPVTGGKEGLLFVKYPDGRPTGDAFVLFSCEEYAQSALKKHKEILGKRYIELFRSTAAEVQQVLNRYMSTPLIPTLPTPIIPVIPPPYAIATGSVRDCVRLRGLPYTAGIDDILEFMGDATGDIKPHGVHMVLNQQGRPSGDAFIQMKSADKAFMVAQKCHKKMMKDRYVEVFQCSGEEMNFVLMGGTLNRSGLSPPPCKLPCLSPPAYAAFQTAAVIPAEAALYQPQALLPTTRTPQASAAAPPAVTYYPAQAAQLYMNYTAYYPSPPVSPTTVGYIAAPPGAVAAAATATHTPILPQPGALVRMQGLPYNTGMKEILSFFQGYQYAPDDYNGLIQLSDQARSVLQAPKEWVCL
SIO_010081: ESRP2
subclass of: SO_0000673
so part of: ESRP2
location: complement(join(221211..221300,228991..229168,230191..230383,231601..231799,233086..233307,234025..234326,234816..234858,235065..235197,236029..236139,236940..236994,237111..237203,237909..238023,239787..239900,258158..258286,259225..259359))
location: region:221211-259359:-1
so has part: feature:259225-259359:-1:exon
so has part: feature:258158-258286:-1:exon
so has part: feature:239787-239900:-1:exon
so has part: feature:237909-238023:-1:exon
so has part: feature:237111-237203:-1:exon
so has part: feature:236940-236994:-1:exon
so has part: feature:236029-236139:-1:exon
so has part: feature:235065-235197:-1:exon
so has part: feature:234816-234858:-1:exon
so has part: feature:234025-234326:-1:exon
so has part: feature:233086-233307:-1:exon
so has part: feature:231601-231799:-1:exon
so has part: feature:230191-230383:-1:exon
so has part: feature:228991-229168:-1:exon
so has part: feature:221211-221300:-1:exon

XP_032557206.1
type: Protein
SIO_000068: ncbiprotein

position:221211:-1
position: 221211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259225-259359:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:258158-258286:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:239787-239900:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237909-238023:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:237111-237203:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:236940-236994:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:236029-236139:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:235065-235197:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:234816-234858:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:234025-234326:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:233086-233307:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:231601-231799:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:230191-230383:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:228991-229168:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:221211-221300:-1:exon

ESRP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ESRP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epithelial splicing regulatory protein 2 isoform X4
translation: MTASHSDSLVVLFGATAGAYGAKLGSDERELILLVWQVVDLHSKKVGTLHKSLVKADNLDLSDQCREVSALTPEGLSKAEPLDRVLQQFSQLVSSDLKVLGRSSYTLCSDGQLLIRQVLHPETSKKNLLLSDCFYSFYDLRKEFRSCYPSSAAGKDQTIKTMAEYLGLGTDEAEEDFGVWQVKTMVAIIFSMLSEGCNHVFTEPETVKHKYETGPCSKSETVDSETVIRARGLPWQSSDQDIARFFKGLNIAKGGVALCLNSQGRRNGEALVRFVSSEQRDLALERHKHHMGSRYIEVYKATGEEFLKIAGGTSNEVAQFLSKENQVIIRMRGLPFTATQEDVLGFLGPECPVTGGKEGLLFVKYPDGRPTGDAFVLFSCEEYAQSALKKHKEILGKRYIELFRSTAAEVQQVLNRYMSTPLIPTLPTPIIPVIPPPYAIATGSVRDCVRLRGLPYTAGIDDILEFMGDATGDIKPHGVHMVLNQQGRPSGDAFIQMKSADKAFMVAQKCHKKMMKDRYVEVFQCSGEEMNFVLMGGTLNRSGLSPPPCLSPPAYAAFQTAAVIPAEAALYQPQALLPTTRTPQASAAAPPAVTYYPAQAAQLYMNYTAYYPSPPVSPTTVGYIAAPPGAVAAAATATHTPILPQPGALVRMQGLPYNTGMKEILSFFQGYQYAPDDYNGLIQLSDQARSVLQAPKEWVCL
SIO_010081: ESRP2
subclass of: SO_0000673
so part of: ESRP2
location: complement(join(221211..221300,228991..229168,230191..230383,231613..231799,233086..233307,234025..234326,234816..234858,235065..235197,236029..236139,236940..236994,237105..237203,237909..238023,239787..239900,258158..258286,259225..259359))
location: region:221211-259359:-1
so has part: feature:259225-259359:-1:exon
so has part: feature:258158-258286:-1:exon
so has part: feature:239787-239900:-1:exon
so has part: feature:237909-238023:-1:exon
so has part: feature:237105-237203:-1:exon
so has part: feature:236940-236994:-1:exon
so has part: feature:236029-236139:-1:exon
so has part: feature:235065-235197:-1:exon
so has part: feature:234816-234858:-1:exon
so has part: feature:234025-234326:-1:exon
so has part: feature:233086-233307:-1:exon
so has part: feature:231613-231799:-1:exon
so has part: feature:230191-230383:-1:exon
so has part: feature:228991-229168:-1:exon
so has part: feature:221211-221300:-1:exon

XP_032557207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259225-259359:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:258158-258286:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:239787-239900:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237909-238023:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:237105-237203:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:236940-236994:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:236029-236139:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:235065-235197:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:234816-234858:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:234025-234326:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:233086-233307:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:231613-231799:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:230191-230383:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:228991-229168:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:221211-221300:-1:exon

ESRP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ESRP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epithelial splicing regulatory protein 2 isoform X1
translation: MTASHSDSLVVLFGATAGAYGAKLGSDERELILLVWQVVDLHSKKVGTLHKSLVKADNLDLSDQCREVSALTPEGLSKAEPLDRVLQQFSQLVSSDLKVLGRSSYTLCSDGQLLIRQVLHPETSKKNLLLSDCFYSFYDLRKEFRSCYPSSAAGKDQTIKTMAEYLGLGTDEAEEDFGVWQVKTMVAIIFSMLSEGCNHVFTEPETVKHKYETGPCSKSETVDSETVIRARGLPWQSSDQDIARFFKGLNIAKGGVALCLNSQGRRNGEALVRFVSSEQRDLALERHKHHMGSRYIEVYKATGEEFLKIAGGTSNEVAQFLSKENQVIIRMRGLPFTATQEDVLGFLGPECPVTGGKEGLLFVKYPDGRPTGDAFVLFSCEEYAQSALKKHKEILGKRYIELFRSTAAEVQQVLNRYMSTPLIPTLPTPIIPVIPPPYAIATGSVRDCVRLRGLPYTAGIDDILEFMGDATGDIKPHGVHMVLNQQGRPSGDAFIQMKSADKAFMVAQKCHKKMMKDRYVEVFQCSGEEMNFVLMGGTLNRSGLSPPPCKLPCLSPPAYAAFQTAAVIPAEAALYQPQALLPTTRTPQASAAAPPAVTYYPAQAAQLYMNYTAYYPSPPVSPTTVGYIAAPPGAVAAAATATHTPILPQPGALVRMQGLPYNTGMKEILSFFQGYQYAPDDYNGLIQLSDQARSVLQAPKEWVCL
SIO_010081: ESRP2
subclass of: SO_0000673
so part of: ESRP2
location: complement(join(221211..221300,228991..229168,230191..230383,231601..231799,233086..233307,234025..234326,234816..234858,235065..235197,236029..236139,236940..236994,237105..237203,237909..238023,239787..239900,258158..258286,259225..259359))
location: region:221211-259359:-1
so has part: feature:259225-259359:-1:exon
so has part: feature:258158-258286:-1:exon
so has part: feature:239787-239900:-1:exon
so has part: feature:237909-238023:-1:exon
so has part: feature:237105-237203:-1:exon
so has part: feature:236940-236994:-1:exon
so has part: feature:236029-236139:-1:exon
so has part: feature:235065-235197:-1:exon
so has part: feature:234816-234858:-1:exon
so has part: feature:234025-234326:-1:exon
so has part: feature:233086-233307:-1:exon
so has part: feature:231601-231799:-1:exon
so has part: feature:230191-230383:-1:exon
so has part: feature:228991-229168:-1:exon
so has part: feature:221211-221300:-1:exon

XP_032557204.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259225-259359:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:258158-258286:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:239787-239900:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237909-238023:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:237105-237203:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:236940-236994:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:236029-236139:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:235065-235197:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:234816-234858:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:234025-234326:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:233086-233307:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:231601-231799:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:230191-230383:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:228991-229168:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:221211-221300:-1:exon

ESRP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: ESRP2
product: epithelial splicing regulatory protein 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032701317.1
SIO_010081: ESRP2
subclass of: SO_0000673
so part of: ESRP2
location: complement(join(230187..230383,231601..231799,233086..233307,234025..234326,234816..234858,235065..235197,236029..236139,236940..236994,237105..237203,237909..238023,239787..239900,258158..258286,259225..259377,259613..259978))
location: region:230187-259978:-1
so has part: feature:259613-259978:-1:exon
so has part: feature:259225-259377:-1:exon
so has part: feature:258158-258286:-1:exon
so has part: feature:239787-239900:-1:exon
so has part: feature:237909-238023:-1:exon
so has part: feature:237105-237203:-1:exon
so has part: feature:236940-236994:-1:exon
so has part: feature:236029-236139:-1:exon
so has part: feature:235065-235197:-1:exon
so has part: feature:234816-234858:-1:exon
so has part: feature:234025-234326:-1:exon
so has part: feature:233086-233307:-1:exon
so has part: feature:231601-231799:-1:exon
so has part: feature:230187-230383:-1:exon

position:230187:-1
position: 230187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259613-259978:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:259225-259377:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:258158-258286:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:239787-239900:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:237909-238023:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:237105-237203:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:236940-236994:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:236029-236139:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:235065-235197:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:234816-234858:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:234025-234326:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:233086-233307:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:231601-231799:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:230187-230383:-1:exon

ESRP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: ESRP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epithelial splicing regulatory protein 2 isoform X5
translation: MTASHSDSLVVLFGATAGAYGAKLGSDERELILLVWQVVDLHSKKVGTLHKSLVKADNLDLSDQCREVSALTPEGLSKAEPLDRVLQQFSQLVSSDLKVLGRSSYTLCSDGQLLIRQVLHPETSKKNLLLSDCFYSFYDLRKEFRSCYPSSAAGKDQTIKTMAEYLGLGTDEAEEDFGVWQVKTMVAIIFSMLSEGCNHVFTEPETVKHKYETGPCSKSETVDSETVIRARGLPWQSSDQDIARFFKGLNIAKGGVALCLNSQGRRNGEALVRFVSSEQRDLALERHKHHMGSRYIEVYKATGEEFLKIAGGTSNEVAQFLSKENQVIIRMRGLPFTATQEDVLGFLGPECPVTGGKEGLLFVKYPDGRPTGDAFVLFSCEEYAQSALKKHKEILGKRYIELFRSTAAEVQQVLNRYMSTPLIPTLPTPIIPVIPPPYAIATGSVRDCVRLRGLPYTAGIDDILEFMGDATGDIKPHGVHMVLNQQGRPSGDAFIQMKSADKAFMVAQKCHKKMMKDRYVEVFQCSGEEMNFVLMGGTLNRSGLSPPPCKLPCLSPPAYAAFQTAAVIPAEAALYQPQALLPTTRTPQASAAAPPAVTYYPAQAAQLYMNYTAYYPR
SIO_010081: ESRP2
subclass of: SO_0000673
so part of: ESRP2
location: complement(join(230187..230383,231601..231799,233086..233307,234025..234326,234816..234858,235065..235197,236029..236139,236940..236994,237105..237203,237909..238023,239787..239900,258158..258286,259225..259359))
location: region:230187-259359:-1
so has part: feature:259225-259359:-1:exon
so has part: feature:258158-258286:-1:exon
so has part: feature:239787-239900:-1:exon
so has part: feature:237909-238023:-1:exon
so has part: feature:237105-237203:-1:exon
so has part: feature:236940-236994:-1:exon
so has part: feature:236029-236139:-1:exon
so has part: feature:235065-235197:-1:exon
so has part: feature:234816-234858:-1:exon
so has part: feature:234025-234326:-1:exon
so has part: feature:233086-233307:-1:exon
so has part: feature:231601-231799:-1:exon
so has part: feature:230187-230383:-1:exon

XP_032557208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259225-259359:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:258158-258286:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:239787-239900:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237909-238023:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:237105-237203:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:236940-236994:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:236029-236139:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:235065-235197:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:234816-234858:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:234025-234326:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:233086-233307:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:231601-231799:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:230187-230383:-1:exon

LOC116793452
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793452
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(259993..311742)
location: region:259993-311742:-1
so has part: feature:259993-311742:-1:exon
subclass of: SO_0000010

116793452
type: Gene
SIO_000068: ncbigene

position:259993:-1
position: 259993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311742:-1
position: 311742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259993-311742:-1:exon

LOC116793452
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 296741
gene: LOC116793452
product: leukotriene B4 receptor 1-like, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004359489.1
SIO_010081: LOC116793452
so part of: LOC116793452
location: complement(join(259993..262418,262511..262592,270104..270167,271354..271478,277622..278008,290593..290704,300596..300698,303629..303713,311592..311742))
location: region:259993-311742:-1
so has part: feature:311592-311742:-1:exon
so has part: feature:303629-303713:-1:exon
so has part: feature:300596-300698:-1:exon
so has part: feature:290593-290704:-1:exon
so has part: feature:277622-278008:-1:exon
so has part: feature:271354-271478:-1:exon
so has part: feature:270104-270167:-1:exon
so has part: feature:262511-262592:-1:exon
so has part: feature:259993-262418:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:311592-311742:-1:exon

position:311592:-1
position: 311592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:303629-303713:-1:exon

position:303629:-1
position: 303629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303713:-1
position: 303713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:300596-300698:-1:exon

position:300596:-1
position: 300596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300698:-1
position: 300698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:290593-290704:-1:exon

position:290593:-1
position: 290593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290704:-1
position: 290704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:277622-278008:-1:exon

position:277622:-1
position: 277622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278008:-1
position: 278008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:271354-271478:-1:exon

position:271354:-1
position: 271354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271478:-1
position: 271478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:270104-270167:-1:exon

position:270104:-1
position: 270104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270167:-1
position: 270167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:262511-262592:-1:exon

position:262511:-1
position: 262511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262592:-1
position: 262592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:259993-262418:-1:exon

position:262418:-1
position: 262418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116793452
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 296741
gene: LOC116793452
product: leukotriene B4 receptor 1-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004359488.1
SIO_010081: LOC116793452
so part of: LOC116793452
location: complement(join(259993..262418,262511..262592,270104..270167,271354..271478,277622..278008,290593..290704,300596..300705,303629..303713,311592..311742))
location: region:259993-311742:-1
so has part: feature:311592-311742:-1:exon
so has part: feature:303629-303713:-1:exon
so has part: feature:300596-300705:-1:exon
so has part: feature:290593-290704:-1:exon
so has part: feature:277622-278008:-1:exon
so has part: feature:271354-271478:-1:exon
so has part: feature:270104-270167:-1:exon
so has part: feature:262511-262592:-1:exon
so has part: feature:259993-262418:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:311592-311742:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:303629-303713:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:300596-300705:-1:exon

position:300705:-1
position: 300705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:290593-290704:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277622-278008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:271354-271478:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:270104-270167:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:262511-262592:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:259993-262418:-1:exon

LOC116793452
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116793452
product: leukotriene B4 receptor 1-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032701323.1
SIO_010081: LOC116793452
subclass of: SO_0000673
so part of: LOC116793452
location: complement(join(259993..261671,262303..262418,262511..262592,270104..270167,271354..271478,277622..278008,290593..290704,293764..293888,296353..298389))
location: region:259993-298389:-1
so has part: feature:296353-298389:-1:exon
so has part: feature:293764-293888:-1:exon
so has part: feature:290593-290704:-1:exon
so has part: feature:277622-278008:-1:exon
so has part: feature:271354-271478:-1:exon
so has part: feature:270104-270167:-1:exon
so has part: feature:262511-262592:-1:exon
so has part: feature:262303-262418:-1:exon
so has part: feature:259993-261671:-1:exon

position:298389:-1
position: 298389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296353-298389:-1:exon

position:296353:-1
position: 296353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:293764-293888:-1:exon

position:293764:-1
position: 293764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293888:-1
position: 293888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:290593-290704:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:277622-278008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:271354-271478:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:270104-270167:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:262511-262592:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:262303-262418:-1:exon

position:262303:-1
position: 262303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:259993-261671:-1:exon

position:261671:-1
position: 261671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116793452
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116793452
product: leukotriene B4 receptor 1-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032701322.1
SIO_010081: LOC116793452
subclass of: SO_0000673
so part of: LOC116793452
location: complement(join(259993..261923,262303..262418,262511..262592,270104..270167,271354..271478,277622..278008,290593..290704,293764..293888,296353..298389))
location: region:259993-298389:-1
so has part: feature:296353-298389:-1:exon
so has part: feature:293764-293888:-1:exon
so has part: feature:290593-290704:-1:exon
so has part: feature:277622-278008:-1:exon
so has part: feature:271354-271478:-1:exon
so has part: feature:270104-270167:-1:exon
so has part: feature:262511-262592:-1:exon
so has part: feature:262303-262418:-1:exon
so has part: feature:259993-261923:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296353-298389:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:293764-293888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:290593-290704:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:277622-278008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:271354-271478:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:270104-270167:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:262511-262592:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:262303-262418:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:259993-261923:-1:exon

position:261923:-1
position: 261923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116793452
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116793452
product: leukotriene B4 receptor 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032701318.1
SIO_010081: LOC116793452
subclass of: SO_0000673
so part of: LOC116793452
location: complement(join(259993..262418,262511..262592,270104..270167,271354..271478,277622..278008,290593..290704,293764..293888,296353..298389))
location: region:259993-298389:-1
so has part: feature:296353-298389:-1:exon
so has part: feature:293764-293888:-1:exon
so has part: feature:290593-290704:-1:exon
so has part: feature:277622-278008:-1:exon
so has part: feature:271354-271478:-1:exon
so has part: feature:270104-270167:-1:exon
so has part: feature:262511-262592:-1:exon
so has part: feature:259993-262418:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296353-298389:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:293764-293888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:290593-290704:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:277622-278008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:271354-271478:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:270104-270167:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:262511-262592:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:259993-262418:-1:exon

LOC116793452
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116793452
product: leukotriene B4 receptor 1-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032701321.1
SIO_010081: LOC116793452
subclass of: SO_0000673
so part of: LOC116793452
location: complement(join(259993..262418,262511..262592,270104..270167,271354..271478,273471..273637,277622..278008,290593..290704,293764..293888,296353..298389))
location: region:259993-298389:-1
so has part: feature:296353-298389:-1:exon
so has part: feature:293764-293888:-1:exon
so has part: feature:290593-290704:-1:exon
so has part: feature:277622-278008:-1:exon
so has part: feature:273471-273637:-1:exon
so has part: feature:271354-271478:-1:exon
so has part: feature:270104-270167:-1:exon
so has part: feature:262511-262592:-1:exon
so has part: feature:259993-262418:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296353-298389:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:293764-293888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:290593-290704:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:277622-278008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:273471-273637:-1:exon

position:273471:-1
position: 273471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273637:-1
position: 273637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:271354-271478:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:270104-270167:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:262511-262592:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:259993-262418:-1:exon

LOC116793452
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116793452
product: leukotriene B4 receptor 1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032701320.1
SIO_010081: LOC116793452
subclass of: SO_0000673
so part of: LOC116793452
location: complement(join(259993..262418,262511..262592,270104..270167,271354..271478,277622..278008,284198..284278,290593..290704,293764..293888,296353..298389))
location: region:259993-298389:-1
so has part: feature:296353-298389:-1:exon
so has part: feature:293764-293888:-1:exon
so has part: feature:290593-290704:-1:exon
so has part: feature:284198-284278:-1:exon
so has part: feature:277622-278008:-1:exon
so has part: feature:271354-271478:-1:exon
so has part: feature:270104-270167:-1:exon
so has part: feature:262511-262592:-1:exon
so has part: feature:259993-262418:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296353-298389:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:293764-293888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:290593-290704:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284198-284278:-1:exon

position:284198:-1
position: 284198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284278:-1
position: 284278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:277622-278008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:271354-271478:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:270104-270167:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:262511-262592:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:259993-262418:-1:exon

LOC116793452
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116793452
product: leukotriene B4 receptor 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032701319.1
SIO_010081: LOC116793452
subclass of: SO_0000673
so part of: LOC116793452
location: complement(join(259993..262418,262511..262592,270104..270167,271354..271478,277622..278008,288398..288515,290593..290704,293764..293888,296353..298389))
location: region:259993-298389:-1
so has part: feature:296353-298389:-1:exon
so has part: feature:293764-293888:-1:exon
so has part: feature:290593-290704:-1:exon
so has part: feature:288398-288515:-1:exon
so has part: feature:277622-278008:-1:exon
so has part: feature:271354-271478:-1:exon
so has part: feature:270104-270167:-1:exon
so has part: feature:262511-262592:-1:exon
so has part: feature:259993-262418:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296353-298389:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:293764-293888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:290593-290704:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:288398-288515:-1:exon

position:288398:-1
position: 288398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288515:-1
position: 288515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:277622-278008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:271354-271478:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:270104-270167:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:262511-262592:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:259993-262418:-1:exon

LOC116793452
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116793452
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leukotriene B4 receptor 1-like
translation: MSQAEESSIHSTWNIVRSVVCIILSLSFIIGTPGNCIVIWTVCRKMKQVSLSVLLILNLAIADVLVLITLPVWIYSFADSWVFGVIFCKILVFIIYCSMYASIFLITALSLERLVAVFYPFTIQRYKRKEKISLIMFLIWFLSITFGISVIPFQETEEMNGQLLCTCRSYSSNRQKVSYLLLETLAGFVIPFLIICTCYVCVARRISRMTYQSKQRSGRLIASIVVAFIVCWFPHHVFNILDIISIEIELSHEEMSLALDEIVDKGVYISGALVFISSCINPLLYAFAARRFQNHLRFAKMSKLFEQMSQTVTEEDKKRSLVVNKQEDALVGTENL
SIO_010081: LOC116793452
subclass of: SO_0000673
so part of: LOC116793452
location: complement(296998..298008)
location: region:296998-298008:-1
so has part: feature:296998-298008:-1:exon

XP_032557209.1
type: Protein
SIO_000068: ncbiprotein

position:296998:-1
position: 296998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298008:-1
position: 298008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296998-298008:-1:exon

LOC116793452
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116793452
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leukotriene B4 receptor 1-like
translation: MSQAEESSIHSTWNIVRSVVCIILSLSFIIGTPGNCIVIWTVCRKMKQVSLSVLLILNLAIADVLVLITLPVWIYSFADSWVFGVIFCKILVFIIYCSMYASIFLITALSLERLVAVFYPFTIQRYKRKEKISLIMFLIWFLSITFGISVIPFQETEEMNGQLLCTCRSYSSNRQKVSYLLLETLAGFVIPFLIICTCYVCVARRISRMTYQSKQRSGRLIASIVVAFIVCWFPHHVFNILDIISIEIELSHEEMSLALDEIVDKGVYISGALVFISSCINPLLYAFAARRFQNHLRFAKMSKLFEQMSQTVTEEDKKRSLVVNKQEDALVGTENL
SIO_010081: LOC116793452
subclass of: SO_0000673
so part of: LOC116793452
location: complement(296998..298008)
location: region:296998-298008:-1
so has part: feature:296998-298008:-1:exon

XP_032557210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:296998-298008:-1:exon

LOC116793452
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116793452
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leukotriene B4 receptor 1-like
translation: MSQAEESSIHSTWNIVRSVVCIILSLSFIIGTPGNCIVIWTVCRKMKQVSLSVLLILNLAIADVLVLITLPVWIYSFADSWVFGVIFCKILVFIIYCSMYASIFLITALSLERLVAVFYPFTIQRYKRKEKISLIMFLIWFLSITFGISVIPFQETEEMNGQLLCTCRSYSSNRQKVSYLLLETLAGFVIPFLIICTCYVCVARRISRMTYQSKQRSGRLIASIVVAFIVCWFPHHVFNILDIISIEIELSHEEMSLALDEIVDKGVYISGALVFISSCINPLLYAFAARRFQNHLRFAKMSKLFEQMSQTVTEEDKKRSLVVNKQEDALVGTENL
SIO_010081: LOC116793452
subclass of: SO_0000673
so part of: LOC116793452
location: complement(296998..298008)
location: region:296998-298008:-1
so has part: feature:296998-298008:-1:exon

XP_032557211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:296998-298008:-1:exon

LOC116793452
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116793452
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leukotriene B4 receptor 1-like
translation: MSQAEESSIHSTWNIVRSVVCIILSLSFIIGTPGNCIVIWTVCRKMKQVSLSVLLILNLAIADVLVLITLPVWIYSFADSWVFGVIFCKILVFIIYCSMYASIFLITALSLERLVAVFYPFTIQRYKRKEKISLIMFLIWFLSITFGISVIPFQETEEMNGQLLCTCRSYSSNRQKVSYLLLETLAGFVIPFLIICTCYVCVARRISRMTYQSKQRSGRLIASIVVAFIVCWFPHHVFNILDIISIEIELSHEEMSLALDEIVDKGVYISGALVFISSCINPLLYAFAARRFQNHLRFAKMSKLFEQMSQTVTEEDKKRSLVVNKQEDALVGTENL
SIO_010081: LOC116793452
subclass of: SO_0000673
so part of: LOC116793452
location: complement(296998..298008)
location: region:296998-298008:-1
so has part: feature:296998-298008:-1:exon

XP_032557212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:296998-298008:-1:exon

LOC116793452
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116793452
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leukotriene B4 receptor 1-like
translation: MSQAEESSIHSTWNIVRSVVCIILSLSFIIGTPGNCIVIWTVCRKMKQVSLSVLLILNLAIADVLVLITLPVWIYSFADSWVFGVIFCKILVFIIYCSMYASIFLITALSLERLVAVFYPFTIQRYKRKEKISLIMFLIWFLSITFGISVIPFQETEEMNGQLLCTCRSYSSNRQKVSYLLLETLAGFVIPFLIICTCYVCVARRISRMTYQSKQRSGRLIASIVVAFIVCWFPHHVFNILDIISIEIELSHEEMSLALDEIVDKGVYISGALVFISSCINPLLYAFAARRFQNHLRFAKMSKLFEQMSQTVTEEDKKRSLVVNKQEDALVGTENL
SIO_010081: LOC116793452
subclass of: SO_0000673
so part of: LOC116793452
location: complement(296998..298008)
location: region:296998-298008:-1
so has part: feature:296998-298008:-1:exon

XP_032557213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:296998-298008:-1:exon

LOC116793452
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116793452
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leukotriene B4 receptor 1-like
translation: MSQAEESSIHSTWNIVRSVVCIILSLSFIIGTPGNCIVIWTVCRKMKQVSLSVLLILNLAIADVLVLITLPVWIYSFADSWVFGVIFCKILVFIIYCSMYASIFLITALSLERLVAVFYPFTIQRYKRKEKISLIMFLIWFLSITFGISVIPFQETEEMNGQLLCTCRSYSSNRQKVSYLLLETLAGFVIPFLIICTCYVCVARRISRMTYQSKQRSGRLIASIVVAFIVCWFPHHVFNILDIISIEIELSHEEMSLALDEIVDKGVYISGALVFISSCINPLLYAFAARRFQNHLRFAKMSKLFEQMSQTVTEEDKKRSLVVNKQEDALVGTENL
SIO_010081: LOC116793452
subclass of: SO_0000673
so part of: LOC116793452
location: complement(296998..298008)
location: region:296998-298008:-1
so has part: feature:296998-298008:-1:exon

XP_032557214.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:296998-298008:-1:exon

PLA2G15
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: PLA2G15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 311946..327618
location: region:311946-327618:1
so has part: feature:311946-327618:1:exon
subclass of: SO_0000010

116793223
type: Gene
SIO_000068: ncbigene

position:311946:1
position: 311946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327618:1
position: 327618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311946-327618:1:exon

PLA2G15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PLA2G15
product: phospholipase A2 group XV
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 12 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032700915.1
SIO_010081: PLA2G15
subclass of: SO_0000673
so part of: PLA2G15
location: join(311946..312127,319709..319864,321746..321870,322705..322796,323208..323432,326057..327618)
location: region:311946-327618:1
so has part: feature:311946-312127:1:exon
so has part: feature:319709-319864:1:exon
so has part: feature:321746-321870:1:exon
so has part: feature:322705-322796:1:exon
so has part: feature:323208-323432:1:exon
so has part: feature:326057-327618:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:311946-312127:1:exon

position:312127:1
position: 312127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:319709-319864:1:exon

position:319709:1
position: 319709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319864:1
position: 319864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:321746-321870:1:exon

position:321746:1
position: 321746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321870:1
position: 321870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:322705-322796:1:exon

position:322705:1
position: 322705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322796:1
position: 322796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:323208-323432:1:exon

position:323208:1
position: 323208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323432:1
position: 323432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:326057-327618:1:exon

position:326057:1
position: 326057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLA2G15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PLA2G15
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: group XV phospholipase A2
translation: MAPPAGARLVPRAAGSPFLGLLLLLPLLLPLPCPGGGAPRRRPAGPPVVLVPGDLGNQLEAKLDKPSVVHYLCSKKTDSYXTLWLNLELLLPVIIDCWIDNIRLVYNRTSKITEPPDGVDIRVPGFGQTFSLEFLDPSKRSVGMFFICLVQSLVDWGYKRDEEVRGAPYDXRKAPNENGDYFVALRKMIELMYEQYGSPVVLIAHSMGNMYTLYFLNQQTQDWKDKYIKDYVSLGAPWGGVAKTLRVLASGDNNRIPVISSLKIRDQQRSAVSTNWMLPYNYTWPPDKVFVSTPTANYTLRDYGRFYRDIGFEDGWFMRQDTEPLLFRMAPPGVRIHCLYGTGVDTPDSFHYESFPDREPRILYSDGDGTVNLQSALQCRRWLRRQKQEVRLFELPGNEHIEMLSNDTTISYVKKLLFDL
SIO_010081: PLA2G15
subclass of: SO_0000673
so part of: PLA2G15
location: join(311977..312127,319709..319864,321746..321870,322705..322796,323208..323432,326057..326568)
location: region:311977-326568:1
so has part: feature:311977-312127:1:exon
so has part: feature:319709-319864:1:exon
so has part: feature:321746-321870:1:exon
so has part: feature:322705-322796:1:exon
so has part: feature:323208-323432:1:exon
so has part: feature:326057-326568:1:exon

XP_032556806.1
type: Protein
SIO_000068: ncbiprotein

position:311977:1
position: 311977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326568:1
position: 326568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311977-312127:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:319709-319864:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:321746-321870:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:322705-322796:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:323208-323432:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:326057-326568:1:exon

LOC116793224
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793224
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(324033..392806)
location: region:324033-392806:-1
so has part: feature:324033-392806:-1:exon
subclass of: SO_0000011

116793224
type: Gene
SIO_000068: ncbigene

position:324033:-1
position: 324033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392806:-1
position: 392806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324033-392806:-1:exon

LOC116793224
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116793224
product: uncharacterized LOC116793224, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004359402.1
SIO_010081: LOC116793224
subclass of: SO_0000673
so part of: LOC116793224
location: complement(join(324033..324151,340372..340465,346525..346615,355148..355217,383976..384081,392687..392806))
location: region:324033-392806:-1
so has part: feature:392687-392806:-1:exon
so has part: feature:383976-384081:-1:exon
so has part: feature:355148-355217:-1:exon
so has part: feature:346525-346615:-1:exon
so has part: feature:340372-340465:-1:exon
so has part: feature:324033-324151:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:392687-392806:-1:exon

position:392687:-1
position: 392687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:383976-384081:-1:exon

position:383976:-1
position: 383976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384081:-1
position: 384081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:355148-355217:-1:exon

position:355148:-1
position: 355148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355217:-1
position: 355217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:346525-346615:-1:exon

position:346525:-1
position: 346525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346615:-1
position: 346615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:340372-340465:-1:exon

position:340372:-1
position: 340372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340465:-1
position: 340465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:324033-324151:-1:exon

position:324151:-1
position: 324151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116793224
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116793224
product: uncharacterized LOC116793224, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004359401.1
SIO_010081: LOC116793224
subclass of: SO_0000673
so part of: LOC116793224
location: complement(join(324033..324151,340372..340465,346525..346615,355148..355217,379085..379179,383976..384081,392687..392806))
location: region:324033-392806:-1
so has part: feature:392687-392806:-1:exon
so has part: feature:383976-384081:-1:exon
so has part: feature:379085-379179:-1:exon
so has part: feature:355148-355217:-1:exon
so has part: feature:346525-346615:-1:exon
so has part: feature:340372-340465:-1:exon
so has part: feature:324033-324151:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:392687-392806:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:383976-384081:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:379085-379179:-1:exon

position:379085:-1
position: 379085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379179:-1
position: 379179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:355148-355217:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:346525-346615:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:340372-340465:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:324033-324151:-1:exon

SMPD3
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: SMPD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 392897..479727
location: region:392897-479727:1
so has part: feature:392897-479727:1:exon
subclass of: SO_0000010

116793217
type: Gene
SIO_000068: ncbigene

position:392897:1
position: 392897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479727:1
position: 479727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392897-479727:1:exon

SMPD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SMPD3
product: sphingomyelin phosphodiesterase 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032700896.1
SIO_010081: SMPD3
subclass of: SO_0000673
so part of: SMPD3
location: join(392897..393088,393350..393431,447148..448771,460512..460587,466619..466774,470137..470226,471081..471144,475747..475909,477066..479727)
location: region:392897-479727:1
so has part: feature:392897-393088:1:exon
so has part: feature:393350-393431:1:exon
so has part: feature:447148-448771:1:exon
so has part: feature:460512-460587:1:exon
so has part: feature:466619-466774:1:exon
so has part: feature:470137-470226:1:exon
so has part: feature:471081-471144:1:exon
so has part: feature:475747-475909:1:exon
so has part: feature:477066-479727:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:392897-393088:1:exon

position:393088:1
position: 393088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:393350-393431:1:exon

position:393350:1
position: 393350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393431:1
position: 393431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:447148-448771:1:exon

position:447148:1
position: 447148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448771:1
position: 448771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:460512-460587:1:exon

position:460512:1
position: 460512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460587:1
position: 460587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:466619-466774:1:exon

position:466619:1
position: 466619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466774:1
position: 466774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:470137-470226:1:exon

position:470137:1
position: 470137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470226:1
position: 470226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:471081-471144:1:exon

position:471081:1
position: 471081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471144:1
position: 471144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:475747-475909:1:exon

position:475747:1
position: 475747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475909:1
position: 475909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:477066-479727:1:exon

position:477066:1
position: 477066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SMPD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SMPD3
product: sphingomyelin phosphodiesterase 3, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032700903.1
SIO_010081: SMPD3
subclass of: SO_0000673
so part of: SMPD3
location: join(393546..393631,447148..448771,460512..460587,466619..466774,470137..470226,471081..471144,475747..475909,477066..479727)
location: region:393546-479727:1
so has part: feature:393546-393631:1:exon
so has part: feature:447148-448771:1:exon
so has part: feature:460512-460587:1:exon
so has part: feature:466619-466774:1:exon
so has part: feature:470137-470226:1:exon
so has part: feature:471081-471144:1:exon
so has part: feature:475747-475909:1:exon
so has part: feature:477066-479727:1:exon

position:393546:1
position: 393546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393546-393631:1:exon

position:393631:1
position: 393631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:447148-448771:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:460512-460587:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:466619-466774:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:470137-470226:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:471081-471144:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:475747-475909:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:477066-479727:1:exon

SMPD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SMPD3
product: sphingomyelin phosphodiesterase 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032700897.1
SIO_010081: SMPD3
subclass of: SO_0000673
so part of: SMPD3
location: join(394864..394984,447148..448771,460512..460587,466619..466774,470137..470226,471081..471144,475747..475909,477066..479727)
location: region:394864-479727:1
so has part: feature:394864-394984:1:exon
so has part: feature:447148-448771:1:exon
so has part: feature:460512-460587:1:exon
so has part: feature:466619-466774:1:exon
so has part: feature:470137-470226:1:exon
so has part: feature:471081-471144:1:exon
so has part: feature:475747-475909:1:exon
so has part: feature:477066-479727:1:exon

position:394864:1
position: 394864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394864-394984:1:exon

position:394984:1
position: 394984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:447148-448771:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:460512-460587:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:466619-466774:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:470137-470226:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:471081-471144:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:475747-475909:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:477066-479727:1:exon

SMPD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SMPD3
product: sphingomyelin phosphodiesterase 3, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032700904.1
SIO_010081: SMPD3
subclass of: SO_0000673
so part of: SMPD3
location: join(415664..415775,447148..448771,460512..460587,466619..466774,470137..470226,471081..471144,475747..475909,477066..479727)
location: region:415664-479727:1
so has part: feature:415664-415775:1:exon
so has part: feature:447148-448771:1:exon
so has part: feature:460512-460587:1:exon
so has part: feature:466619-466774:1:exon
so has part: feature:470137-470226:1:exon
so has part: feature:471081-471144:1:exon
so has part: feature:475747-475909:1:exon
so has part: feature:477066-479727:1:exon

position:415664:1
position: 415664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415664-415775:1:exon

position:415775:1
position: 415775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:447148-448771:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:460512-460587:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:466619-466774:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:470137-470226:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:471081-471144:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:475747-475909:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:477066-479727:1:exon

SMPD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SMPD3
product: sphingomyelin phosphodiesterase 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032700899.1
SIO_010081: SMPD3
subclass of: SO_0000673
so part of: SMPD3
location: join(425296..425406,447148..448771,460512..460587,466619..466774,470137..470226,471081..471144,475747..475909,477066..479727)
location: region:425296-479727:1
so has part: feature:425296-425406:1:exon
so has part: feature:447148-448771:1:exon
so has part: feature:460512-460587:1:exon
so has part: feature:466619-466774:1:exon
so has part: feature:470137-470226:1:exon
so has part: feature:471081-471144:1:exon
so has part: feature:475747-475909:1:exon
so has part: feature:477066-479727:1:exon

position:425296:1
position: 425296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425296-425406:1:exon

position:425406:1
position: 425406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:447148-448771:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:460512-460587:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:466619-466774:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:470137-470226:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:471081-471144:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:475747-475909:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:477066-479727:1:exon

SMPD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SMPD3
product: sphingomyelin phosphodiesterase 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032700901.1
SIO_010081: SMPD3
subclass of: SO_0000673
so part of: SMPD3
location: join(425305..425406,426489..426549,447148..448771,460512..460587,466619..466774,470137..470226,471081..471144,475747..475909,477066..479727)
location: region:425305-479727:1
so has part: feature:425305-425406:1:exon
so has part: feature:426489-426549:1:exon
so has part: feature:447148-448771:1:exon
so has part: feature:460512-460587:1:exon
so has part: feature:466619-466774:1:exon
so has part: feature:470137-470226:1:exon
so has part: feature:471081-471144:1:exon
so has part: feature:475747-475909:1:exon
so has part: feature:477066-479727:1:exon

position:425305:1
position: 425305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425305-425406:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:426489-426549:1:exon

position:426489:1
position: 426489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426549:1
position: 426549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:447148-448771:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:460512-460587:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:466619-466774:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:470137-470226:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:471081-471144:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:475747-475909:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:477066-479727:1:exon

SMPD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SMPD3
product: sphingomyelin phosphodiesterase 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032700900.1
SIO_010081: SMPD3
subclass of: SO_0000673
so part of: SMPD3
location: join(434013..434100,447148..448771,460512..460587,466619..466774,470137..470226,471081..471144,475747..475909,477066..479727)
location: region:434013-479727:1
so has part: feature:434013-434100:1:exon
so has part: feature:447148-448771:1:exon
so has part: feature:460512-460587:1:exon
so has part: feature:466619-466774:1:exon
so has part: feature:470137-470226:1:exon
so has part: feature:471081-471144:1:exon
so has part: feature:475747-475909:1:exon
so has part: feature:477066-479727:1:exon

position:434013:1
position: 434013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434013-434100:1:exon

position:434100:1
position: 434100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:447148-448771:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:460512-460587:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:466619-466774:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:470137-470226:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:471081-471144:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:475747-475909:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:477066-479727:1:exon

SMPD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SMPD3
product: sphingomyelin phosphodiesterase 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032700902.1
SIO_010081: SMPD3
subclass of: SO_0000673
so part of: SMPD3
location: join(434104..434173,447148..448771,460512..460587,466619..466774,470137..470226,471081..471144,475747..475909,477066..479727)
location: region:434104-479727:1
so has part: feature:434104-434173:1:exon
so has part: feature:447148-448771:1:exon
so has part: feature:460512-460587:1:exon
so has part: feature:466619-466774:1:exon
so has part: feature:470137-470226:1:exon
so has part: feature:471081-471144:1:exon
so has part: feature:475747-475909:1:exon
so has part: feature:477066-479727:1:exon

position:434104:1
position: 434104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434104-434173:1:exon

position:434173:1
position: 434173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:447148-448771:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:460512-460587:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:466619-466774:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:470137-470226:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:471081-471144:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:475747-475909:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:477066-479727:1:exon

SMPD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SMPD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sphingomyelin phosphodiesterase 3
translation: MVLYTSPFPNSFLSVLHSFSWGLIFPCYWLADRLVGSFVPTTYEKRQRADDPCYFHALCIIITTPIYLALLAASLPFALIGFLLWSPLQSARRPYIYSRLRDKHRADGATLLTEWKAAGSGKSFCFGTANVCLLPDSLARFNNVFNTQARAKEIGRRIHNGASRPQIKIYIDSPTNTSVSAASFSSLASPQGGENTNRAVNAGIKRTTSMEYKGDNSGSNNSEEREEKGGSGEPTEGEENTCIVRINGEDNGHMSDPEPDTVNGRAHASGPAEPSLEGDAEISKTPNHKQKEGDSGSLDSYSASRESLVKVRAGDGTVDQSTVNNKLLYKASIMKKTSVRKKKHTDETFDHEISAFFPANLDFLCLQEVFDKRAAEKLKEQLHHYFEYIVYDVGVYSCHGCCSFKFVNSGLLFASRYPVMDAAYHCYPNGRGMDSLASKGALFLKVQVGSTPQDQRIVGYISCTHLQAIAGDTTVRCEQLDMLQDWLSEFRKSTSSSSTANPEELVAFDVICGDLNFDNCSSDDKLEQQHSLFTHYKDPCRVGPGEDKPWAIGTLLDPEGLYDEEVCTPDNLQKVLESEEGRKGYLVYPTSKNHSSSQKGRKASLKGNGRRIDYMLYTEEGLYLEWKVEVEEFSFITQLAGLTDHLPVAMRLMVSTGEDDP
SIO_010081: SMPD3
subclass of: SO_0000673
so part of: SMPD3
location: join(447437..448771,460512..460587,466619..466774,470137..470226,471081..471144,475747..475909,477066..477167)
location: region:447437-477167:1
so has part: feature:447437-448771:1:exon
so has part: feature:460512-460587:1:exon
so has part: feature:466619-466774:1:exon
so has part: feature:470137-470226:1:exon
so has part: feature:471081-471144:1:exon
so has part: feature:475747-475909:1:exon
so has part: feature:477066-477167:1:exon

XP_032556787.1
type: Protein
SIO_000068: ncbiprotein

position:447437:1
position: 447437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477167:1
position: 477167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447437-448771:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:460512-460587:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:466619-466774:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:470137-470226:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:471081-471144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:475747-475909:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:477066-477167:1:exon

SMPD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SMPD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sphingomyelin phosphodiesterase 3
translation: MVLYTSPFPNSFLSVLHSFSWGLIFPCYWLADRLVGSFVPTTYEKRQRADDPCYFHALCIIITTPIYLALLAASLPFALIGFLLWSPLQSARRPYIYSRLRDKHRADGATLLTEWKAAGSGKSFCFGTANVCLLPDSLARFNNVFNTQARAKEIGRRIHNGASRPQIKIYIDSPTNTSVSAASFSSLASPQGGENTNRAVNAGIKRTTSMEYKGDNSGSNNSEEREEKGGSGEPTEGEENTCIVRINGEDNGHMSDPEPDTVNGRAHASGPAEPSLEGDAEISKTPNHKQKEGDSGSLDSYSASRESLVKVRAGDGTVDQSTVNNKLLYKASIMKKTSVRKKKHTDETFDHEISAFFPANLDFLCLQEVFDKRAAEKLKEQLHHYFEYIVYDVGVYSCHGCCSFKFVNSGLLFASRYPVMDAAYHCYPNGRGMDSLASKGALFLKVQVGSTPQDQRIVGYISCTHLQAIAGDTTVRCEQLDMLQDWLSEFRKSTSSSSTANPEELVAFDVICGDLNFDNCSSDDKLEQQHSLFTHYKDPCRVGPGEDKPWAIGTLLDPEGLYDEEVCTPDNLQKVLESEEGRKGYLVYPTSKNHSSSQKGRKASLKGNGRRIDYMLYTEEGLYLEWKVEVEEFSFITQLAGLTDHLPVAMRLMVSTGEDDP
SIO_010081: SMPD3
subclass of: SO_0000673
so part of: SMPD3
location: join(447437..448771,460512..460587,466619..466774,470137..470226,471081..471144,475747..475909,477066..477167)
location: region:447437-477167:1
so has part: feature:447437-448771:1:exon
so has part: feature:460512-460587:1:exon
so has part: feature:466619-466774:1:exon
so has part: feature:470137-470226:1:exon
so has part: feature:471081-471144:1:exon
so has part: feature:475747-475909:1:exon
so has part: feature:477066-477167:1:exon

XP_032556788.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:447437-448771:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:460512-460587:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:466619-466774:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:470137-470226:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:471081-471144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:475747-475909:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:477066-477167:1:exon

SMPD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SMPD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sphingomyelin phosphodiesterase 3
translation: MVLYTSPFPNSFLSVLHSFSWGLIFPCYWLADRLVGSFVPTTYEKRQRADDPCYFHALCIIITTPIYLALLAASLPFALIGFLLWSPLQSARRPYIYSRLRDKHRADGATLLTEWKAAGSGKSFCFGTANVCLLPDSLARFNNVFNTQARAKEIGRRIHNGASRPQIKIYIDSPTNTSVSAASFSSLASPQGGENTNRAVNAGIKRTTSMEYKGDNSGSNNSEEREEKGGSGEPTEGEENTCIVRINGEDNGHMSDPEPDTVNGRAHASGPAEPSLEGDAEISKTPNHKQKEGDSGSLDSYSASRESLVKVRAGDGTVDQSTVNNKLLYKASIMKKTSVRKKKHTDETFDHEISAFFPANLDFLCLQEVFDKRAAEKLKEQLHHYFEYIVYDVGVYSCHGCCSFKFVNSGLLFASRYPVMDAAYHCYPNGRGMDSLASKGALFLKVQVGSTPQDQRIVGYISCTHLQAIAGDTTVRCEQLDMLQDWLSEFRKSTSSSSTANPEELVAFDVICGDLNFDNCSSDDKLEQQHSLFTHYKDPCRVGPGEDKPWAIGTLLDPEGLYDEEVCTPDNLQKVLESEEGRKGYLVYPTSKNHSSSQKGRKASLKGNGRRIDYMLYTEEGLYLEWKVEVEEFSFITQLAGLTDHLPVAMRLMVSTGEDDP
SIO_010081: SMPD3
subclass of: SO_0000673
so part of: SMPD3
location: join(447437..448771,460512..460587,466619..466774,470137..470226,471081..471144,475747..475909,477066..477167)
location: region:447437-477167:1
so has part: feature:447437-448771:1:exon
so has part: feature:460512-460587:1:exon
so has part: feature:466619-466774:1:exon
so has part: feature:470137-470226:1:exon
so has part: feature:471081-471144:1:exon
so has part: feature:475747-475909:1:exon
so has part: feature:477066-477167:1:exon

XP_032556790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:447437-448771:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:460512-460587:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:466619-466774:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:470137-470226:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:471081-471144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:475747-475909:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:477066-477167:1:exon

SMPD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SMPD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sphingomyelin phosphodiesterase 3
translation: MVLYTSPFPNSFLSVLHSFSWGLIFPCYWLADRLVGSFVPTTYEKRQRADDPCYFHALCIIITTPIYLALLAASLPFALIGFLLWSPLQSARRPYIYSRLRDKHRADGATLLTEWKAAGSGKSFCFGTANVCLLPDSLARFNNVFNTQARAKEIGRRIHNGASRPQIKIYIDSPTNTSVSAASFSSLASPQGGENTNRAVNAGIKRTTSMEYKGDNSGSNNSEEREEKGGSGEPTEGEENTCIVRINGEDNGHMSDPEPDTVNGRAHASGPAEPSLEGDAEISKTPNHKQKEGDSGSLDSYSASRESLVKVRAGDGTVDQSTVNNKLLYKASIMKKTSVRKKKHTDETFDHEISAFFPANLDFLCLQEVFDKRAAEKLKEQLHHYFEYIVYDVGVYSCHGCCSFKFVNSGLLFASRYPVMDAAYHCYPNGRGMDSLASKGALFLKVQVGSTPQDQRIVGYISCTHLQAIAGDTTVRCEQLDMLQDWLSEFRKSTSSSSTANPEELVAFDVICGDLNFDNCSSDDKLEQQHSLFTHYKDPCRVGPGEDKPWAIGTLLDPEGLYDEEVCTPDNLQKVLESEEGRKGYLVYPTSKNHSSSQKGRKASLKGNGRRIDYMLYTEEGLYLEWKVEVEEFSFITQLAGLTDHLPVAMRLMVSTGEDDP
SIO_010081: SMPD3
subclass of: SO_0000673
so part of: SMPD3
location: join(447437..448771,460512..460587,466619..466774,470137..470226,471081..471144,475747..475909,477066..477167)
location: region:447437-477167:1
so has part: feature:447437-448771:1:exon
so has part: feature:460512-460587:1:exon
so has part: feature:466619-466774:1:exon
so has part: feature:470137-470226:1:exon
so has part: feature:471081-471144:1:exon
so has part: feature:475747-475909:1:exon
so has part: feature:477066-477167:1:exon

XP_032556791.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:447437-448771:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:460512-460587:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:466619-466774:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:470137-470226:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:471081-471144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:475747-475909:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:477066-477167:1:exon

SMPD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SMPD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sphingomyelin phosphodiesterase 3
translation: MVLYTSPFPNSFLSVLHSFSWGLIFPCYWLADRLVGSFVPTTYEKRQRADDPCYFHALCIIITTPIYLALLAASLPFALIGFLLWSPLQSARRPYIYSRLRDKHRADGATLLTEWKAAGSGKSFCFGTANVCLLPDSLARFNNVFNTQARAKEIGRRIHNGASRPQIKIYIDSPTNTSVSAASFSSLASPQGGENTNRAVNAGIKRTTSMEYKGDNSGSNNSEEREEKGGSGEPTEGEENTCIVRINGEDNGHMSDPEPDTVNGRAHASGPAEPSLEGDAEISKTPNHKQKEGDSGSLDSYSASRESLVKVRAGDGTVDQSTVNNKLLYKASIMKKTSVRKKKHTDETFDHEISAFFPANLDFLCLQEVFDKRAAEKLKEQLHHYFEYIVYDVGVYSCHGCCSFKFVNSGLLFASRYPVMDAAYHCYPNGRGMDSLASKGALFLKVQVGSTPQDQRIVGYISCTHLQAIAGDTTVRCEQLDMLQDWLSEFRKSTSSSSTANPEELVAFDVICGDLNFDNCSSDDKLEQQHSLFTHYKDPCRVGPGEDKPWAIGTLLDPEGLYDEEVCTPDNLQKVLESEEGRKGYLVYPTSKNHSSSQKGRKASLKGNGRRIDYMLYTEEGLYLEWKVEVEEFSFITQLAGLTDHLPVAMRLMVSTGEDDP
SIO_010081: SMPD3
subclass of: SO_0000673
so part of: SMPD3
location: join(447437..448771,460512..460587,466619..466774,470137..470226,471081..471144,475747..475909,477066..477167)
location: region:447437-477167:1
so has part: feature:447437-448771:1:exon
so has part: feature:460512-460587:1:exon
so has part: feature:466619-466774:1:exon
so has part: feature:470137-470226:1:exon
so has part: feature:471081-471144:1:exon
so has part: feature:475747-475909:1:exon
so has part: feature:477066-477167:1:exon

XP_032556792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:447437-448771:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:460512-460587:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:466619-466774:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:470137-470226:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:471081-471144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:475747-475909:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:477066-477167:1:exon

SMPD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SMPD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sphingomyelin phosphodiesterase 3
translation: MVLYTSPFPNSFLSVLHSFSWGLIFPCYWLADRLVGSFVPTTYEKRQRADDPCYFHALCIIITTPIYLALLAASLPFALIGFLLWSPLQSARRPYIYSRLRDKHRADGATLLTEWKAAGSGKSFCFGTANVCLLPDSLARFNNVFNTQARAKEIGRRIHNGASRPQIKIYIDSPTNTSVSAASFSSLASPQGGENTNRAVNAGIKRTTSMEYKGDNSGSNNSEEREEKGGSGEPTEGEENTCIVRINGEDNGHMSDPEPDTVNGRAHASGPAEPSLEGDAEISKTPNHKQKEGDSGSLDSYSASRESLVKVRAGDGTVDQSTVNNKLLYKASIMKKTSVRKKKHTDETFDHEISAFFPANLDFLCLQEVFDKRAAEKLKEQLHHYFEYIVYDVGVYSCHGCCSFKFVNSGLLFASRYPVMDAAYHCYPNGRGMDSLASKGALFLKVQVGSTPQDQRIVGYISCTHLQAIAGDTTVRCEQLDMLQDWLSEFRKSTSSSSTANPEELVAFDVICGDLNFDNCSSDDKLEQQHSLFTHYKDPCRVGPGEDKPWAIGTLLDPEGLYDEEVCTPDNLQKVLESEEGRKGYLVYPTSKNHSSSQKGRKASLKGNGRRIDYMLYTEEGLYLEWKVEVEEFSFITQLAGLTDHLPVAMRLMVSTGEDDP
SIO_010081: SMPD3
subclass of: SO_0000673
so part of: SMPD3
location: join(447437..448771,460512..460587,466619..466774,470137..470226,471081..471144,475747..475909,477066..477167)
location: region:447437-477167:1
so has part: feature:447437-448771:1:exon
so has part: feature:460512-460587:1:exon
so has part: feature:466619-466774:1:exon
so has part: feature:470137-470226:1:exon
so has part: feature:471081-471144:1:exon
so has part: feature:475747-475909:1:exon
so has part: feature:477066-477167:1:exon

XP_032556793.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:447437-448771:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:460512-460587:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:466619-466774:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:470137-470226:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:471081-471144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:475747-475909:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:477066-477167:1:exon

SMPD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SMPD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sphingomyelin phosphodiesterase 3
translation: MVLYTSPFPNSFLSVLHSFSWGLIFPCYWLADRLVGSFVPTTYEKRQRADDPCYFHALCIIITTPIYLALLAASLPFALIGFLLWSPLQSARRPYIYSRLRDKHRADGATLLTEWKAAGSGKSFCFGTANVCLLPDSLARFNNVFNTQARAKEIGRRIHNGASRPQIKIYIDSPTNTSVSAASFSSLASPQGGENTNRAVNAGIKRTTSMEYKGDNSGSNNSEEREEKGGSGEPTEGEENTCIVRINGEDNGHMSDPEPDTVNGRAHASGPAEPSLEGDAEISKTPNHKQKEGDSGSLDSYSASRESLVKVRAGDGTVDQSTVNNKLLYKASIMKKTSVRKKKHTDETFDHEISAFFPANLDFLCLQEVFDKRAAEKLKEQLHHYFEYIVYDVGVYSCHGCCSFKFVNSGLLFASRYPVMDAAYHCYPNGRGMDSLASKGALFLKVQVGSTPQDQRIVGYISCTHLQAIAGDTTVRCEQLDMLQDWLSEFRKSTSSSSTANPEELVAFDVICGDLNFDNCSSDDKLEQQHSLFTHYKDPCRVGPGEDKPWAIGTLLDPEGLYDEEVCTPDNLQKVLESEEGRKGYLVYPTSKNHSSSQKGRKASLKGNGRRIDYMLYTEEGLYLEWKVEVEEFSFITQLAGLTDHLPVAMRLMVSTGEDDP
SIO_010081: SMPD3
subclass of: SO_0000673
so part of: SMPD3
location: join(447437..448771,460512..460587,466619..466774,470137..470226,471081..471144,475747..475909,477066..477167)
location: region:447437-477167:1
so has part: feature:447437-448771:1:exon
so has part: feature:460512-460587:1:exon
so has part: feature:466619-466774:1:exon
so has part: feature:470137-470226:1:exon
so has part: feature:471081-471144:1:exon
so has part: feature:475747-475909:1:exon
so has part: feature:477066-477167:1:exon

XP_032556794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:447437-448771:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:460512-460587:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:466619-466774:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:470137-470226:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:471081-471144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:475747-475909:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:477066-477167:1:exon

SMPD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SMPD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sphingomyelin phosphodiesterase 3
translation: MVLYTSPFPNSFLSVLHSFSWGLIFPCYWLADRLVGSFVPTTYEKRQRADDPCYFHALCIIITTPIYLALLAASLPFALIGFLLWSPLQSARRPYIYSRLRDKHRADGATLLTEWKAAGSGKSFCFGTANVCLLPDSLARFNNVFNTQARAKEIGRRIHNGASRPQIKIYIDSPTNTSVSAASFSSLASPQGGENTNRAVNAGIKRTTSMEYKGDNSGSNNSEEREEKGGSGEPTEGEENTCIVRINGEDNGHMSDPEPDTVNGRAHASGPAEPSLEGDAEISKTPNHKQKEGDSGSLDSYSASRESLVKVRAGDGTVDQSTVNNKLLYKASIMKKTSVRKKKHTDETFDHEISAFFPANLDFLCLQEVFDKRAAEKLKEQLHHYFEYIVYDVGVYSCHGCCSFKFVNSGLLFASRYPVMDAAYHCYPNGRGMDSLASKGALFLKVQVGSTPQDQRIVGYISCTHLQAIAGDTTVRCEQLDMLQDWLSEFRKSTSSSSTANPEELVAFDVICGDLNFDNCSSDDKLEQQHSLFTHYKDPCRVGPGEDKPWAIGTLLDPEGLYDEEVCTPDNLQKVLESEEGRKGYLVYPTSKNHSSSQKGRKASLKGNGRRIDYMLYTEEGLYLEWKVEVEEFSFITQLAGLTDHLPVAMRLMVSTGEDDP
SIO_010081: SMPD3
subclass of: SO_0000673
so part of: SMPD3
location: join(447437..448771,460512..460587,466619..466774,470137..470226,471081..471144,475747..475909,477066..477167)
location: region:447437-477167:1
so has part: feature:447437-448771:1:exon
so has part: feature:460512-460587:1:exon
so has part: feature:466619-466774:1:exon
so has part: feature:470137-470226:1:exon
so has part: feature:471081-471144:1:exon
so has part: feature:475747-475909:1:exon
so has part: feature:477066-477167:1:exon

XP_032556795.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:447437-448771:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:460512-460587:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:466619-466774:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:470137-470226:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:471081-471144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:475747-475909:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:477066-477167:1:exon

LOC116793226
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793226
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(480845..490272)
location: region:480845-490272:-1
so has part: feature:480845-490272:-1:exon
subclass of: SO_0000011

116793226
type: Gene
SIO_000068: ncbigene

position:480845:-1
position: 480845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490272:-1
position: 490272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480845-490272:-1:exon

LOC116793226
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116793226
product: uncharacterized LOC116793226, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004359405.1
SIO_010081: LOC116793226
subclass of: SO_0000673
so part of: LOC116793226
location: complement(join(480845..481207,485039..485196,486196..486459,489816..490272))
location: region:480845-490272:-1
so has part: feature:489816-490272:-1:exon
so has part: feature:486196-486459:-1:exon
so has part: feature:485039-485196:-1:exon
so has part: feature:480845-481207:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:489816-490272:-1:exon

position:489816:-1
position: 489816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:486196-486459:-1:exon

position:486196:-1
position: 486196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486459:-1
position: 486459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:485039-485196:-1:exon

position:485039:-1
position: 485039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485196:-1
position: 485196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:480845-481207:-1:exon

position:481207:-1
position: 481207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116793226
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116793226
product: uncharacterized LOC116793226, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004359404.1
SIO_010081: LOC116793226
subclass of: SO_0000673
so part of: LOC116793226
location: complement(join(481507..481805,485039..485196,489816..490272))
location: region:481507-490272:-1
so has part: feature:489816-490272:-1:exon
so has part: feature:485039-485196:-1:exon
so has part: feature:481507-481805:-1:exon

position:481507:-1
position: 481507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489816-490272:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:485039-485196:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:481507-481805:-1:exon

position:481805:-1
position: 481805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116793226
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116793226
product: uncharacterized LOC116793226, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004359403.1
SIO_010081: LOC116793226
subclass of: SO_0000673
so part of: LOC116793226
location: complement(join(481507..481805,485039..485196,486196..486459,489816..490272))
location: region:481507-490272:-1
so has part: feature:489816-490272:-1:exon
so has part: feature:486196-486459:-1:exon
so has part: feature:485039-485196:-1:exon
so has part: feature:481507-481805:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:489816-490272:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:486196-486459:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:485039-485196:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:481507-481805:-1:exon

PRMT7
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: PRMT7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(490276..506634)
location: region:490276-506634:-1
so has part: feature:490276-506634:-1:exon
subclass of: SO_0000010

116793222
type: Gene
SIO_000068: ncbigene

position:490276:-1
position: 490276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:506634:-1
position: 506634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490276-506634:-1:exon

PRMT7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: PRMT7
product: protein arginine methyltransferase 7
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 10 bases in 7 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 7 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032700914.1
SIO_010081: PRMT7
subclass of: SO_0000673
so part of: PRMT7
location: complement(join(490276..491093,491655..491751,492879..493039,493785..493858,495892..496053,496696..496813,497588..497618,498331..498414,498830..498968,499862..499982,500126..500303,500446..500687,501821..501933,502671..502779,504134..504283,505542..505578,506352..506634))
location: region:490276-506634:-1
so has part: feature:506352-506634:-1:exon
so has part: feature:505542-505578:-1:exon
so has part: feature:504134-504283:-1:exon
so has part: feature:502671-502779:-1:exon
so has part: feature:501821-501933:-1:exon
so has part: feature:500446-500687:-1:exon
so has part: feature:500126-500303:-1:exon
so has part: feature:499862-499982:-1:exon
so has part: feature:498830-498968:-1:exon
so has part: feature:498331-498414:-1:exon
so has part: feature:497588-497618:-1:exon
so has part: feature:496696-496813:-1:exon
so has part: feature:495892-496053:-1:exon
so has part: feature:493785-493858:-1:exon
so has part: feature:492879-493039:-1:exon
so has part: feature:491655-491751:-1:exon
so has part: feature:490276-491093:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:506352-506634:-1:exon

position:506352:-1
position: 506352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:505542-505578:-1:exon

position:505542:-1
position: 505542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505578:-1
position: 505578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:504134-504283:-1:exon

position:504134:-1
position: 504134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504283:-1
position: 504283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:502671-502779:-1:exon

position:502671:-1
position: 502671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502779:-1
position: 502779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:501821-501933:-1:exon

position:501821:-1
position: 501821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501933:-1
position: 501933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:500446-500687:-1:exon

position:500446:-1
position: 500446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500687:-1
position: 500687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:500126-500303:-1:exon

position:500126:-1
position: 500126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500303:-1
position: 500303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:499862-499982:-1:exon

position:499862:-1
position: 499862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499982:-1
position: 499982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:498830-498968:-1:exon

position:498830:-1
position: 498830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498968:-1
position: 498968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:498331-498414:-1:exon

position:498331:-1
position: 498331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498414:-1
position: 498414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:497588-497618:-1:exon

position:497588:-1
position: 497588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:497618:-1
position: 497618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:496696-496813:-1:exon

position:496696:-1
position: 496696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:496813:-1
position: 496813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:495892-496053:-1:exon

position:495892:-1
position: 495892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:496053:-1
position: 496053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:493785-493858:-1:exon

position:493785:-1
position: 493785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:493858:-1
position: 493858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:492879-493039:-1:exon

position:492879:-1
position: 492879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:493039:-1
position: 493039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:491655-491751:-1:exon

position:491655:-1
position: 491655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491751:-1
position: 491751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:490276-491093:-1:exon

position:491093:-1
position: 491093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRMT7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: PRMT7
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 10 bases in 7 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein arginine N-methyltransferase 7
translation: MKTFCGRANPTTGAMEWLEEAEDYDYHQEIARSRYADMLHDKDRNVKYYQGIRAAVSRVKERGEEAIVLDIGTGTGLLAMMAASAGADFCYAVEVFRPMANAAVKIVEKNGFSDKIKVINKHSTEVTVGPDGDMECRANILVTELFDTELIGEGALPTYEHAHKYLVQEGCEAVPHRATVYVQLVESKRMWAWNKLFPIHVEAEDGEKVIVPPSEMENCPGVPSVCDIQLNQVPSSDFTALSDVVTMFSVDFSKPVQSASTSYRVQLEPVRSGKAQIVLSWWDISMDPSGMINCTMAPYWVNPTSALQWRDHWMQCXYFLPREELLQGAXVQLTARRDEYCLWYSLQRARAEEAEAAAGVESPVCRCHAHLLWNRPRFGQLNDQARTRQYIRALRTVLNTDSVCLCISDGSLLPVLAHYLGAKQVFTVENSGVSYSMLLVGFMLLKANHLEDKIXIIEARPELLKPSHFEIKRYISVLVGEPFFSTSLLPWHNLYFWYARTAVSRHLSSNVSVLPQSAALHMMVVEFQDLWRIRSXCGICEGFDVQTMDDMIKDSLNFRESKEAEPHPLWEYPCKSLSEPXEVLVFDFREPVPQHCLSTEGSVPLLRKGKSHGAVLWMEYHLAADISISTGLVQISNEKGTCAWNPHCKQAVYFFSSVXESEALSDPAAVTYAISFDTKTGEIAXDFKLL
SIO_010081: PRMT7
subclass of: SO_0000673
so part of: PRMT7
location: complement(join(490941..491093,491655..491751,492879..493039,493785..493858,495892..496053,496696..496813,497588..497618,498331..498414,498830..498968,499862..499982,500126..500303,500446..500687,501821..501933,502671..502779,504134..504283,505542..505578,506352..506446))
location: region:490941-506446:-1
so has part: feature:506352-506446:-1:exon
so has part: feature:505542-505578:-1:exon
so has part: feature:504134-504283:-1:exon
so has part: feature:502671-502779:-1:exon
so has part: feature:501821-501933:-1:exon
so has part: feature:500446-500687:-1:exon
so has part: feature:500126-500303:-1:exon
so has part: feature:499862-499982:-1:exon
so has part: feature:498830-498968:-1:exon
so has part: feature:498331-498414:-1:exon
so has part: feature:497588-497618:-1:exon
so has part: feature:496696-496813:-1:exon
so has part: feature:495892-496053:-1:exon
so has part: feature:493785-493858:-1:exon
so has part: feature:492879-493039:-1:exon
so has part: feature:491655-491751:-1:exon
so has part: feature:490941-491093:-1:exon

XP_032556805.1
type: Protein
SIO_000068: ncbiprotein

position:490941:-1
position: 490941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:506446:-1
position: 506446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506352-506446:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:505542-505578:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:504134-504283:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:502671-502779:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:501821-501933:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:500446-500687:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:500126-500303:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:499862-499982:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:498830-498968:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:498331-498414:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:497588-497618:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:496696-496813:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:495892-496053:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:493785-493858:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:492879-493039:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:491655-491751:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:490941-491093:-1:exon

SLC7A6OS
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: SLC7A6OS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 507412..510794
location: region:507412-510794:1
so has part: feature:507412-510794:1:exon
subclass of: SO_0000010

116793221
type: Gene
SIO_000068: ncbigene

position:507412:1
position: 507412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510794:1
position: 510794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507412-510794:1:exon

SLC7A6OS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SLC7A6OS
product: solute carrier family 7 member 6 opposite strand
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_032700913.1
SIO_010081: SLC7A6OS
subclass of: SO_0000673
so part of: SLC7A6OS
location: join(507412..507582,508304..508765,508942..509136,509992..510115,510556..510794)
location: region:507412-510794:1
so has part: feature:507412-507582:1:exon
so has part: feature:508304-508765:1:exon
so has part: feature:508942-509136:1:exon
so has part: feature:509992-510115:1:exon
so has part: feature:510556-510794:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:507412-507582:1:exon

position:507582:1
position: 507582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:508304-508765:1:exon

position:508304:1
position: 508304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508765:1
position: 508765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:508942-509136:1:exon

position:508942:1
position: 508942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509136:1
position: 509136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:509992-510115:1:exon

position:509992:1
position: 509992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510115:1
position: 510115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:510556-510794:1:exon

position:510556:1
position: 510556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC7A6OS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SLC7A6OS
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: probable RNA polymerase II nuclear localization protein SLC7A6OS
translation: MSSAAVLRVRRKRGGPEPAEALLLACKRRREEPPERSLFKLVATVPSKNEPVQKYVKDAITRDRAAQSLRPPVGSTQRILQELQPPVGSTQRILQELQPPVGSTQRILQELRSSRQVERKESRYRVVASHRPACAATAVPATGAGADTDGHGAGSGAREDASQEESGAADKSSDCCGKFQLFDIVQEEEMVGDCSVTSANPQKIDPDVILCNAVEMIRERLNVSEDAKKHCDKEDEYVYDIYYKETSAPGWIENILSVQPYREEYEWVNDDPVPEEVYEDEDDENDENNWRNDYPEEDEFLPEDDGEKEPEESSSDEEQYYRRRTWXQYRQEVLQEFGYDEMEDLGSD
SIO_010081: SLC7A6OS
subclass of: SO_0000673
so part of: SLC7A6OS
location: join(507439..507582,508304..508765,508942..509136,509992..510115,510556..510676)
location: region:507439-510676:1
so has part: feature:507439-507582:1:exon
so has part: feature:508304-508765:1:exon
so has part: feature:508942-509136:1:exon
so has part: feature:509992-510115:1:exon
so has part: feature:510556-510676:1:exon

XP_032556804.1
type: Protein
SIO_000068: ncbiprotein

position:507439:1
position: 507439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510676:1
position: 510676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507439-507582:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:508304-508765:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:508942-509136:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:509992-510115:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:510556-510676:1:exon

SLC7A6
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: SLC7A6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(512436..536694)
location: region:512436-536694:-1
so has part: feature:512436-536694:-1:exon
subclass of: SO_0000010

116793220
type: Gene
SIO_000068: ncbigene

position:512436:-1
position: 512436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536694:-1
position: 536694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512436-536694:-1:exon

SLC7A6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SLC7A6
product: solute carrier family 7 member 6
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 33 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032700912.1
SIO_010081: SLC7A6
subclass of: SO_0000673
so part of: SLC7A6
location: complement(join(512436..513272,514479..514661,515367..515516,515763..515859,516759..516862,527853..527976,529903..530047,531731..531856,534287..534848,535310..536694))
location: region:512436-536694:-1
so has part: feature:535310-536694:-1:exon
so has part: feature:534287-534848:-1:exon
so has part: feature:531731-531856:-1:exon
so has part: feature:529903-530047:-1:exon
so has part: feature:527853-527976:-1:exon
so has part: feature:516759-516862:-1:exon
so has part: feature:515763-515859:-1:exon
so has part: feature:515367-515516:-1:exon
so has part: feature:514479-514661:-1:exon
so has part: feature:512436-513272:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:535310-536694:-1:exon

position:535310:-1
position: 535310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:534287-534848:-1:exon

position:534287:-1
position: 534287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534848:-1
position: 534848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:531731-531856:-1:exon

position:531731:-1
position: 531731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531856:-1
position: 531856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:529903-530047:-1:exon

position:529903:-1
position: 529903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530047:-1
position: 530047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:527853-527976:-1:exon

position:527853:-1
position: 527853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527976:-1
position: 527976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:516759-516862:-1:exon

position:516759:-1
position: 516759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516862:-1
position: 516862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:515763-515859:-1:exon

position:515763:-1
position: 515763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:515859:-1
position: 515859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:515367-515516:-1:exon

position:515367:-1
position: 515367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:515516:-1
position: 515516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:514479-514661:-1:exon

position:514479:-1
position: 514479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:514661:-1
position: 514661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:512436-513272:-1:exon

position:513272:-1
position: 513272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC7A6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SLC7A6
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: Y+L amino acid transporter 2
translation: MAERTEGTQSHISGAEYSPVSKSERTDPSATQHGSENALQLKKEISLLNGXSLIVGNMIGSGIFVSPKGVLIYSRSYGLSLVVWAMGGIFSVFGALCYAELGTTITKSGASYAYILESFGSFIAFIRLWTSLLIVEPTSQAIIAITFANYIVQPFFPSCDPPYLACRLIAAACECLLTFINCAYVKWGTRVQDIFTYAKVIALIAIIIAGIVKLCQGHTSHFENSFEGSSFNIGDISLALYSALFSYSGWDTLNFVTEEIKNPERNLPLAIAVSMPIVTIIYIMTNVAYYTVLDAQAVLSSDAVAVTFADQAFGSFSWTIPIAVAFSCFGGLNASILASSRLFFVGSREGHLPDLLSMIHIGRFTPVPALLFNCIMTLFYLAVEDVFKLINYFSFSYWFFVGLSIAGQLYLRWKEPDRPRPLKLSLAFPIIFCICTIFLVVIPLYSDFINSVIGIGIALSGIPFFXLGVYLPASRRPQFINKILGAVTRKVQLLCYCVLTEMDTNEEKKLERKSN
SIO_010081: SLC7A6
subclass of: SO_0000673
so part of: SLC7A6
location: complement(join(513178..513272,514479..514661,515367..515516,515763..515859,516759..516862,527853..527976,529903..530047,531731..531856,534287..534808))
location: region:513178-534808:-1
so has part: feature:534287-534808:-1:exon
so has part: feature:531731-531856:-1:exon
so has part: feature:529903-530047:-1:exon
so has part: feature:527853-527976:-1:exon
so has part: feature:516759-516862:-1:exon
so has part: feature:515763-515859:-1:exon
so has part: feature:515367-515516:-1:exon
so has part: feature:514479-514661:-1:exon
so has part: feature:513178-513272:-1:exon

XP_032556803.1
type: Protein
SIO_000068: ncbiprotein

position:513178:-1
position: 513178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534808:-1
position: 534808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534287-534808:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:531731-531856:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:529903-530047:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:527853-527976:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:516759-516862:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:515763-515859:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:515367-515516:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:514479-514661:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:513178-513272:-1:exon

OSGIN1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: OSGIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 541009..607793
location: region:541009-607793:1
so has part: feature:541009-607793:1:exon
subclass of: SO_0000010

116793218
type: Gene
SIO_000068: ncbigene

position:541009:1
position: 541009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607793:1
position: 607793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541009-607793:1:exon

OSGIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: OSGIN1
product: oxidative stress induced growth inhibitor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032700906.1
SIO_010081: OSGIN1
subclass of: SO_0000673
so part of: OSGIN1
location: join(541009..541114,543159..543207,564671..564798,600947..601052,603688..603824,604142..604333,604647..604738,605401..607793)
location: region:541009-607793:1
so has part: feature:541009-541114:1:exon
so has part: feature:543159-543207:1:exon
so has part: feature:564671-564798:1:exon
so has part: feature:600947-601052:1:exon
so has part: feature:603688-603824:1:exon
so has part: feature:604142-604333:1:exon
so has part: feature:604647-604738:1:exon
so has part: feature:605401-607793:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:541009-541114:1:exon

position:541114:1
position: 541114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:543159-543207:1:exon

position:543159:1
position: 543159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543207:1
position: 543207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:564671-564798:1:exon

position:564671:1
position: 564671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564798:1
position: 564798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:600947-601052:1:exon

position:600947:1
position: 600947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601052:1
position: 601052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:603688-603824:1:exon

position:603688:1
position: 603688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603824:1
position: 603824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:604142-604333:1:exon

position:604142:1
position: 604142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604333:1
position: 604333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:604647-604738:1:exon

position:604647:1
position: 604647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604738:1
position: 604738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:605401-607793:1:exon

position:605401:1
position: 605401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OSGIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: OSGIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxidative stress-induced growth inhibitor 1 isoform X2
translation: MAIAAPNLASTVPVQPLSRPAARLRHFAWQHMWIRENFCKASLSYHQVDSRTEMLPDRKMYPLLTRPSQKSGLKPLPVVIIGNGPSGICLSYLLSGYIPYFKRESLHPNPILQRKLEEAPEVSILDQDLDYLSEGLQGRSDSPVALLFDALQRPDTDWGGTAESVLRWRHEPSRAIPHLVLGRNAPGGAWHSIEGSMVTLSRGEWMGLPDLPFKEWLKQKRRGLRNNRATAEDIAQYYQHYVVKKGLQKNFRCGTVVTSVRKVSAGSISSHTQRDLQENSGSLWNSSEQSTEIFQVDGFFKAVEGDKEPFSIHAENVVLATGTFDSPTWLGVKGENLSYVHHQLSALEEAVKSNSIGIMSDPVLVVGAGLTAADAILFAHHCSIPVIHVFRRRVSDPGLIFNQLPKMMYPEYHKVHQMMKEQTAACAGPYECYISLPEHHVLSFGKDRKCIIQDKNGCQKAYKISMALVLTGSNPNLSFLPNNGIDLAMDSDQPVNPKRNPIDVDPFSHECTQEKGLYALGPLAGDNFVRFVQGGALAAASSLLRKANKNPP
SIO_010081: OSGIN1
subclass of: SO_0000673
so part of: OSGIN1
location: join(543198..543207,564671..564798,600947..601052,603688..603824,604142..604333,604647..604738,605401..606394)
location: region:543198-606394:1
so has part: feature:543198-543207:1:exon
so has part: feature:564671-564798:1:exon
so has part: feature:600947-601052:1:exon
so has part: feature:603688-603824:1:exon
so has part: feature:604142-604333:1:exon
so has part: feature:604647-604738:1:exon
so has part: feature:605401-606394:1:exon

XP_032556797.1
type: Protein
SIO_000068: ncbiprotein

position:543198:1
position: 543198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:606394:1
position: 606394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:543198-543207:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564671-564798:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:600947-601052:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:603688-603824:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:604142-604333:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:604647-604738:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:605401-606394:1:exon

LOC116793219
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793219
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(552903..567085)
location: region:552903-567085:-1
so has part: feature:552903-567085:-1:exon
subclass of: SO_0000010

116793219
type: Gene
SIO_000068: ncbigene

position:552903:-1
position: 552903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567085:-1
position: 567085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552903-567085:-1:exon

LOC116793219
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116793219
product: receptor-interacting serine/threonine-protein kinase 2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032700911.1
SIO_010081: LOC116793219
subclass of: SO_0000673
so part of: LOC116793219
location: complement(join(552903..554361,555692..555844,556732..556897,557188..557256,558702..558787,559542..559703,560687..560736,562566..562708,562822..562977,563177..563330,564022..564175,566497..567085))
location: region:552903-567085:-1
so has part: feature:566497-567085:-1:exon
so has part: feature:564022-564175:-1:exon
so has part: feature:563177-563330:-1:exon
so has part: feature:562822-562977:-1:exon
so has part: feature:562566-562708:-1:exon
so has part: feature:560687-560736:-1:exon
so has part: feature:559542-559703:-1:exon
so has part: feature:558702-558787:-1:exon
so has part: feature:557188-557256:-1:exon
so has part: feature:556732-556897:-1:exon
so has part: feature:555692-555844:-1:exon
so has part: feature:552903-554361:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:566497-567085:-1:exon

position:566497:-1
position: 566497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:564022-564175:-1:exon

position:564022:-1
position: 564022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564175:-1
position: 564175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:563177-563330:-1:exon

position:563177:-1
position: 563177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563330:-1
position: 563330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:562822-562977:-1:exon

position:562822:-1
position: 562822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562977:-1
position: 562977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:562566-562708:-1:exon

position:562566:-1
position: 562566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562708:-1
position: 562708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:560687-560736:-1:exon

position:560687:-1
position: 560687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560736:-1
position: 560736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:559542-559703:-1:exon

position:559542:-1
position: 559542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559703:-1
position: 559703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:558702-558787:-1:exon

position:558702:-1
position: 558702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558787:-1
position: 558787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:557188-557256:-1:exon

position:557188:-1
position: 557188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:557256:-1
position: 557256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:556732-556897:-1:exon

position:556732:-1
position: 556732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556897:-1
position: 556897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:555692-555844:-1:exon

position:555692:-1
position: 555692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555844:-1
position: 555844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:552903-554361:-1:exon

position:554361:-1
position: 554361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116793219
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116793219
product: receptor-interacting serine/threonine-protein kinase 2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032700910.1
SIO_010081: LOC116793219
subclass of: SO_0000673
so part of: LOC116793219
location: complement(join(552903..554361,555692..555844,556732..556897,557188..557256,558702..558787,559542..559703,560687..560736,562566..562708,562822..562977,563177..563330,564022..564183,566497..567085))
location: region:552903-567085:-1
so has part: feature:566497-567085:-1:exon
so has part: feature:564022-564183:-1:exon
so has part: feature:563177-563330:-1:exon
so has part: feature:562822-562977:-1:exon
so has part: feature:562566-562708:-1:exon
so has part: feature:560687-560736:-1:exon
so has part: feature:559542-559703:-1:exon
so has part: feature:558702-558787:-1:exon
so has part: feature:557188-557256:-1:exon
so has part: feature:556732-556897:-1:exon
so has part: feature:555692-555844:-1:exon
so has part: feature:552903-554361:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:566497-567085:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564022-564183:-1:exon

position:564183:-1
position: 564183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:563177-563330:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:562822-562977:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:562566-562708:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:560687-560736:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:559542-559703:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:558702-558787:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:557188-557256:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:556732-556897:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:555692-555844:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:552903-554361:-1:exon

LOC116793219
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116793219
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-interacting serine/threonine-protein kinase 2-like
translation: MANPLPVVAQEDLESFTVTRTGSGFALKAFHISWNTPISVKLLSSQDTTEREWKLLLQDIAGVRGCESERLLPPLGIYQCHGLVGLVTGWMDNGSLHSLIHERQLYPDLPCPLLLRILSDVAEGLHHLHSLQPASCHCSLKPSNVLLDGQYRAKISDYGLTSWRKQQLRSALQNQRSCQDLVYLPPEILEGGFPSQEGDIYSFGIMCWESLSRQKPSEGQTALLEVLTGICCSSRPGLSDKFIPSNFPERNRLLHLIALCWHQDPAHRPRTAECVDLLNGILTGINKEVISTAIYSLMDAKERALDACKGSATYTLQTGTCNSEIICPPKNNRLISKKIPFIVPSSTGLLDSSGNNAGRENILEMGLSNTIPQNAKTRKDHPGSESRKPNLFRKIPLSGSAADTQSSQDVAPLLALQHSPQPLHPGQAVTGPCCKGTFCQILTCQRQSILSCMTEGRLNHLLDVLRSQQTLSRPDYETITSHPTLTGRARALLDTCLCLGDRAAQGVLTALSGTKCSPLGQVSHCPDCPLR
SIO_010081: LOC116793219
subclass of: SO_0000673
so part of: LOC116793219
location: complement(join(554057..554361,555692..555844,556732..556897,557188..557256,558702..558787,559542..559703,560687..560736,562566..562708,562822..562977,563177..563330,564022..564173))
location: region:554057-564173:-1
so has part: feature:564022-564173:-1:exon
so has part: feature:563177-563330:-1:exon
so has part: feature:562822-562977:-1:exon
so has part: feature:562566-562708:-1:exon
so has part: feature:560687-560736:-1:exon
so has part: feature:559542-559703:-1:exon
so has part: feature:558702-558787:-1:exon
so has part: feature:557188-557256:-1:exon
so has part: feature:556732-556897:-1:exon
so has part: feature:555692-555844:-1:exon
so has part: feature:554057-554361:-1:exon

XP_032556801.1
type: Protein
SIO_000068: ncbiprotein

position:554057:-1
position: 554057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564173:-1
position: 564173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:564022-564173:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:563177-563330:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:562822-562977:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:562566-562708:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:560687-560736:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:559542-559703:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:558702-558787:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:557188-557256:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:556732-556897:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:555692-555844:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:554057-554361:-1:exon

LOC116793219
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116793219
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-interacting serine/threonine-protein kinase 2-like
translation: MANPLPVVAQEDLESFTVTRTGSGFALKAFHISWNTPISVKLLSSQDTTEREWKLLLQDIAGVRGCESERLLPPLGIYQCHGLVGLVTGWMDNGSLHSLIHERQLYPDLPCPLLLRILSDVAEGLHHLHSLQPASCHCSLKPSNVLLDGQYRAKISDYGLTSWRKQQLRSALQNQRSCQDLVYLPPEILEGGFPSQEGDIYSFGIMCWESLSRQKPSEGQTALLEVLTGICCSSRPGLSDKFIPSNFPERNRLLHLIALCWHQDPAHRPRTAECVDLLNGILTGINKEVISTAIYSLMDAKERALDACKGSATYTLQTGTCNSEIICPPKNNRLISKKIPFIVPSSTGLLDSSGNNAGRENILEMGLSNTIPQNAKTRKDHPGSESRKPNLFRKIPLSGSAADTQSSQDVAPLLALQHSPQPLHPGQAVTGPCCKGTFCQILTCQRQSILSCMTEGRLNHLLDVLRSQQTLSRPDYETITSHPTLTGRARALLDTCLCLGDRAAQGVLTALSGTKCSPLGQVSHCPDCPLR
SIO_010081: LOC116793219
subclass of: SO_0000673
so part of: LOC116793219
location: complement(join(554057..554361,555692..555844,556732..556897,557188..557256,558702..558787,559542..559703,560687..560736,562566..562708,562822..562977,563177..563330,564022..564173))
location: region:554057-564173:-1
so has part: feature:564022-564173:-1:exon
so has part: feature:563177-563330:-1:exon
so has part: feature:562822-562977:-1:exon
so has part: feature:562566-562708:-1:exon
so has part: feature:560687-560736:-1:exon
so has part: feature:559542-559703:-1:exon
so has part: feature:558702-558787:-1:exon
so has part: feature:557188-557256:-1:exon
so has part: feature:556732-556897:-1:exon
so has part: feature:555692-555844:-1:exon
so has part: feature:554057-554361:-1:exon

XP_032556802.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:564022-564173:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:563177-563330:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:562822-562977:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:562566-562708:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:560687-560736:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:559542-559703:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:558702-558787:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:557188-557256:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:556732-556897:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:555692-555844:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:554057-554361:-1:exon

OSGIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: OSGIN1
product: oxidative stress induced growth inhibitor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032700905.1
SIO_010081: OSGIN1
subclass of: SO_0000673
so part of: OSGIN1
location: join(596223..596402,600947..601052,603688..603824,604142..604333,604647..604738,605401..607793)
location: region:596223-607793:1
so has part: feature:596223-596402:1:exon
so has part: feature:600947-601052:1:exon
so has part: feature:603688-603824:1:exon
so has part: feature:604142-604333:1:exon
so has part: feature:604647-604738:1:exon
so has part: feature:605401-607793:1:exon

position:596223:1
position: 596223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596223-596402:1:exon

position:596402:1
position: 596402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:600947-601052:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:603688-603824:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:604142-604333:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:604647-604738:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:605401-607793:1:exon

OSGIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: OSGIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxidative stress-induced growth inhibitor 1 isoform X1
translation: MSLKRKKYKLKSVFSDTPALSDALRVKNEDICSVQALCPARLLSASAAVTVRRTLQVDSRTEMLPDRKMYPLLTRPSQKSGLKPLPVVIIGNGPSGICLSYLLSGYIPYFKRESLHPNPILQRKLEEAPEVSILDQDLDYLSEGLQGRSDSPVALLFDALQRPDTDWGGTAESVLRWRHEPSRAIPHLVLGRNAPGGAWHSIEGSMVTLSRGEWMGLPDLPFKEWLKQKRRGLRNNRATAEDIAQYYQHYVVKKGLQKNFRCGTVVTSVRKVSAGSISSHTQRDLQENSGSLWNSSEQSTEIFQVDGFFKAVEGDKEPFSIHAENVVLATGTFDSPTWLGVKGENLSYVHHQLSALEEAVKSNSIGIMSDPVLVVGAGLTAADAILFAHHCSIPVIHVFRRRVSDPGLIFNQLPKMMYPEYHKVHQMMKEQTAACAGPYECYISLPEHHVLSFGKDRKCIIQDKNGCQKAYKISMALVLTGSNPNLSFLPNNGIDLAMDSDQPVNPKRNPIDVDPFSHECTQEKGLYALGPLAGDNFVRFVQGGALAAASSLLRKANKNPP
SIO_010081: OSGIN1
subclass of: SO_0000673
so part of: OSGIN1
location: join(596238..596402,600947..601052,603688..603824,604142..604333,604647..604738,605401..606394)
location: region:596238-606394:1
so has part: feature:596238-596402:1:exon
so has part: feature:600947-601052:1:exon
so has part: feature:603688-603824:1:exon
so has part: feature:604142-604333:1:exon
so has part: feature:604647-604738:1:exon
so has part: feature:605401-606394:1:exon

XP_032556796.1
type: Protein
SIO_000068: ncbiprotein

position:596238:1
position: 596238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596238-596402:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:600947-601052:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:603688-603824:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:604142-604333:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:604647-604738:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:605401-606394:1:exon

OSGIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: OSGIN1
product: oxidative stress induced growth inhibitor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 3 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032700907.1
SIO_010081: OSGIN1
subclass of: SO_0000673
so part of: OSGIN1
location: join(596685..596808,600947..601052,603688..603824,604142..604333,604647..604738,605401..607793)
location: region:596685-607793:1
so has part: feature:596685-596808:1:exon
so has part: feature:600947-601052:1:exon
so has part: feature:603688-603824:1:exon
so has part: feature:604142-604333:1:exon
so has part: feature:604647-604738:1:exon
so has part: feature:605401-607793:1:exon

position:596685:1
position: 596685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596685-596808:1:exon

position:596808:1
position: 596808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:600947-601052:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:603688-603824:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:604142-604333:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:604647-604738:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:605401-607793:1:exon

OSGIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: OSGIN1
product: oxidative stress induced growth inhibitor 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 3 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_032700909.1
SIO_010081: OSGIN1
subclass of: SO_0000673
so part of: OSGIN1
location: join(596723..596808,600950..601052,603688..603824,604142..604333,604647..604738,605401..607793)
location: region:596723-607793:1
so has part: feature:596723-596808:1:exon
so has part: feature:600950-601052:1:exon
so has part: feature:603688-603824:1:exon
so has part: feature:604142-604333:1:exon
so has part: feature:604647-604738:1:exon
so has part: feature:605401-607793:1:exon

position:596723:1
position: 596723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596723-596808:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:600950-601052:1:exon

position:600950:1
position: 600950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:603688-603824:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:604142-604333:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:604647-604738:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:605401-607793:1:exon

OSGIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: OSGIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxidative stress-induced growth inhibitor 1 isoform X3
translation: MLPDRKMYPLLTRPSQKSGLKPLPVVIIGNGPSGICLSYLLSGYIPYFKRESLHPNPILQRKLEEAPEVSILDQDLDYLSEGLQGRSDSPVALLFDALQRPDTDWGGTAESVLRWRHEPSRAIPHLVLGRNAPGGAWHSIEGSMVTLSRGEWMGLPDLPFKEWLKQKRRGLRNNRATAEDIAQYYQHYVVKKGLQKNFRCGTVVTSVRKVSAGSISSHTQRDLQENSGSLWNSSEQSTEIFQVDGFFKAVEGDKEPFSIHAENVVLATGTFDSPTWLGVKGENLSYVHHQLSALEEAVKSNSIGIMSDPVLVVGAGLTAADAILFAHHCSIPVIHVFRRRVSDPGLIFNQLPKMMYPEYHKVHQMMKEQTAACAGPYECYISLPEHHVLSFGKDRKCIIQDKNGCQKAYKISMALVLTGSNPNLSFLPNNGIDLAMDSDQPVNPKRNPIDVDPFSHECTQEKGLYALGPLAGDNFVRFVQGGALAAASSLLRKANKNPP
SIO_010081: OSGIN1
subclass of: SO_0000673
so part of: OSGIN1
location: join(600968..601052,603688..603824,604142..604333,604647..604738,605401..606394)
location: region:600968-606394:1
so has part: feature:600968-601052:1:exon
so has part: feature:603688-603824:1:exon
so has part: feature:604142-604333:1:exon
so has part: feature:604647-604738:1:exon
so has part: feature:605401-606394:1:exon

XP_032556798.1
type: Protein
SIO_000068: ncbiprotein

position:600968:1
position: 600968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:600968-601052:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:603688-603824:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:604142-604333:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:604647-604738:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:605401-606394:1:exon

OSGIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: OSGIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxidative stress-induced growth inhibitor 1 isoform X3
translation: MLPDRKMYPLLTRPSQKSGLKPLPVVIIGNGPSGICLSYLLSGYIPYFKRESLHPNPILQRKLEEAPEVSILDQDLDYLSEGLQGRSDSPVALLFDALQRPDTDWGGTAESVLRWRHEPSRAIPHLVLGRNAPGGAWHSIEGSMVTLSRGEWMGLPDLPFKEWLKQKRRGLRNNRATAEDIAQYYQHYVVKKGLQKNFRCGTVVTSVRKVSAGSISSHTQRDLQENSGSLWNSSEQSTEIFQVDGFFKAVEGDKEPFSIHAENVVLATGTFDSPTWLGVKGENLSYVHHQLSALEEAVKSNSIGIMSDPVLVVGAGLTAADAILFAHHCSIPVIHVFRRRVSDPGLIFNQLPKMMYPEYHKVHQMMKEQTAACAGPYECYISLPEHHVLSFGKDRKCIIQDKNGCQKAYKISMALVLTGSNPNLSFLPNNGIDLAMDSDQPVNPKRNPIDVDPFSHECTQEKGLYALGPLAGDNFVRFVQGGALAAASSLLRKANKNPP
SIO_010081: OSGIN1
subclass of: SO_0000673
so part of: OSGIN1
location: join(600968..601052,603688..603824,604142..604333,604647..604738,605401..606394)
location: region:600968-606394:1
so has part: feature:600968-601052:1:exon
so has part: feature:603688-603824:1:exon
so has part: feature:604142-604333:1:exon
so has part: feature:604647-604738:1:exon
so has part: feature:605401-606394:1:exon

XP_032556800.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:600968-601052:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:603688-603824:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:604142-604333:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:604647-604738:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:605401-606394:1:exon

NECAB2
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: NECAB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 625570..692334
location: region:625570-692334:1
so has part: feature:625570-692334:1:exon
subclass of: SO_0000010

116793512
type: Gene
SIO_000068: ncbigene

position:625570:1
position: 625570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:692334:1
position: 692334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:625570-692334:1:exon

NECAB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: NECAB2
product: N-terminal EF-hand calcium binding protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032701403.1
SIO_010081: NECAB2
subclass of: SO_0000673
so part of: NECAB2
location: join(625570..625781,634621..634645,657655..657763,674324..674349,677675..677772,687359..687495,689371..689489,689619..689698,690281..690337,690435..690547,690873..690950,691315..691406,691554..692334)
location: region:625570-692334:1
so has part: feature:625570-625781:1:exon
so has part: feature:634621-634645:1:exon
so has part: feature:657655-657763:1:exon
so has part: feature:674324-674349:1:exon
so has part: feature:677675-677772:1:exon
so has part: feature:687359-687495:1:exon
so has part: feature:689371-689489:1:exon
so has part: feature:689619-689698:1:exon
so has part: feature:690281-690337:1:exon
so has part: feature:690435-690547:1:exon
so has part: feature:690873-690950:1:exon
so has part: feature:691315-691406:1:exon
so has part: feature:691554-692334:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:625570-625781:1:exon

position:625781:1
position: 625781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:634621-634645:1:exon

position:634621:1
position: 634621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634645:1
position: 634645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:657655-657763:1:exon

position:657655:1
position: 657655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:657763:1
position: 657763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:674324-674349:1:exon

position:674324:1
position: 674324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:674349:1
position: 674349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:677675-677772:1:exon

position:677675:1
position: 677675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677772:1
position: 677772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:687359-687495:1:exon

position:687359:1
position: 687359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:687495:1
position: 687495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:689371-689489:1:exon

position:689371:1
position: 689371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:689489:1
position: 689489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:689619-689698:1:exon

position:689619:1
position: 689619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:689698:1
position: 689698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:690281-690337:1:exon

position:690281:1
position: 690281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:690337:1
position: 690337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:690435-690547:1:exon

position:690435:1
position: 690435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:690547:1
position: 690547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:690873-690950:1:exon

position:690873:1
position: 690873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:690950:1
position: 690950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:691315-691406:1:exon

position:691315:1
position: 691315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:691406:1
position: 691406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:691554-692334:1:exon

position:691554:1
position: 691554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NECAB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: NECAB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-terminal EF-hand calcium-binding protein 2
translation: MCEQAARYCRAGVQRLLRKPAPALRGLDGLLRWAAARMGDKGLAERELLAPGAAAAQRKGTSVILDIFRRADKNDDGKLSLEEFQAFFSDGTLNEEELEKLFHTIDSDNTNNVDTKELCDYFADHMGDYEDVLASLEMLNLSILKAMDYTKRVYESGTNVEQFVTRFLLKETANQTQSLLSSVESAVDAIDEQTNPSRHYPSKAGHGLSDPWYDSPVPSYAPTTWVVPREHGKTLQAGSPDTKAEGLEGQINRLAKLIGKLEDKTLWFDLHQRLSDSESSACTYLLLVRNEMTVSHKHLGEFCSSLKQYLKSVAGERDCFHVTAVKLPDGVTFIVYEFWETEEDWKRHLQSATCKGFQHVKVDTLSQPEAVSSVAVPAAWCTLSRD
SIO_010081: NECAB2
subclass of: SO_0000673
so part of: NECAB2
location: join(625584..625781,634621..634645,657655..657763,674324..674349,677675..677772,687359..687495,689371..689489,689619..689698,690281..690337,690435..690547,690873..690950,691315..691406,691554..691582)
location: region:625584-691582:1
so has part: feature:625584-625781:1:exon
so has part: feature:634621-634645:1:exon
so has part: feature:657655-657763:1:exon
so has part: feature:674324-674349:1:exon
so has part: feature:677675-677772:1:exon
so has part: feature:687359-687495:1:exon
so has part: feature:689371-689489:1:exon
so has part: feature:689619-689698:1:exon
so has part: feature:690281-690337:1:exon
so has part: feature:690435-690547:1:exon
so has part: feature:690873-690950:1:exon
so has part: feature:691315-691406:1:exon
so has part: feature:691554-691582:1:exon

XP_032557294.1
type: Protein
SIO_000068: ncbiprotein

position:625584:1
position: 625584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:691582:1
position: 691582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:625584-625781:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:634621-634645:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:657655-657763:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:674324-674349:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:677675-677772:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:687359-687495:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:689371-689489:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:689619-689698:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:690281-690337:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:690435-690547:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:690873-690950:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:691315-691406:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:691554-691582:1:exon

SLC38A8
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: SLC38A8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(692263..695595)
location: region:692263-695595:-1
so has part: feature:692263-695595:-1:exon
subclass of: SO_0000010

116793511
type: Gene
SIO_000068: ncbigene

position:692263:-1
position: 692263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:695595:-1
position: 695595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:692263-695595:-1:exon

SLC38A8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SLC38A8
product: solute carrier family 38 member 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032701402.1
SIO_010081: SLC38A8
subclass of: SO_0000673
so part of: SLC38A8
location: complement(join(692263..692547,692686..692737,692909..693108,693194..693341,693437..693551,693818..693875,694176..694280,694419..694572,694797..694995,695401..695595))
location: region:692263-695595:-1
so has part: feature:695401-695595:-1:exon
so has part: feature:694797-694995:-1:exon
so has part: feature:694419-694572:-1:exon
so has part: feature:694176-694280:-1:exon
so has part: feature:693818-693875:-1:exon
so has part: feature:693437-693551:-1:exon
so has part: feature:693194-693341:-1:exon
so has part: feature:692909-693108:-1:exon
so has part: feature:692686-692737:-1:exon
so has part: feature:692263-692547:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:695401-695595:-1:exon

position:695401:-1
position: 695401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:694797-694995:-1:exon

position:694797:-1
position: 694797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694995:-1
position: 694995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:694419-694572:-1:exon

position:694419:-1
position: 694419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694572:-1
position: 694572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:694176-694280:-1:exon

position:694176:-1
position: 694176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694280:-1
position: 694280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:693818-693875:-1:exon

position:693818:-1
position: 693818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693875:-1
position: 693875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:693437-693551:-1:exon

position:693437:-1
position: 693437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693551:-1
position: 693551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:693194-693341:-1:exon

position:693194:-1
position: 693194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693341:-1
position: 693341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:692909-693108:-1:exon

position:692909:-1
position: 692909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693108:-1
position: 693108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:692686-692737:-1:exon

position:692686:-1
position: 692686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:692737:-1
position: 692737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:692263-692547:-1:exon

position:692547:-1
position: 692547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC38A8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SLC38A8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative sodium-coupled neutral amino acid transporter 8
translation: MERAAGEARPLLPAPGGSAALPAPGLSSAGAVFILLKSALGAGLLSFPWAFGRAGGAVPALLVELGSLVFLVSGLAVLGYAAALSAQPTYQGVVRTVCGAAVGKLCELCFLLNLFMISVALLRVVGDQLEKLCDSLYPNGTLSGAPQLPPWYVDQRFTLSALCVLVIFPLSVPREIGFQKYSSILGTLAACYLTLVIILKYYLQAESLSLTSPPQPSRSSSWASVFSVIPTICFGFQCHEACVAIYSSMSNQSFSHWVTVSVLSMLVCLLIYSLTGLYGYLTFGEAVASDVLMSYPGNDPLVIVARLLFGVSIVTIYPIVVLLGRSVVKDLWAAPKRGAAAVSEAQERRGRVALTVTWMGTTLAIALFVPDIGKVIELIGGISAFFIFIFPGLCLVCMTGTRSLGPRKKAALIAWGVLSVLGGAFVCGQSAALAVLGLLR
SIO_010081: SLC38A8
subclass of: SO_0000673
so part of: SLC38A8
location: complement(join(692451..692547,692686..692737,692909..693108,693194..693341,693437..693551,693818..693875,694176..694280,694419..694572,694797..694995,695401..695595))
location: region:692451-695595:-1
so has part: feature:695401-695595:-1:exon
so has part: feature:694797-694995:-1:exon
so has part: feature:694419-694572:-1:exon
so has part: feature:694176-694280:-1:exon
so has part: feature:693818-693875:-1:exon
so has part: feature:693437-693551:-1:exon
so has part: feature:693194-693341:-1:exon
so has part: feature:692909-693108:-1:exon
so has part: feature:692686-692737:-1:exon
so has part: feature:692451-692547:-1:exon

XP_032557293.1
type: Protein
SIO_000068: ncbiprotein

position:692451:-1
position: 692451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:695401-695595:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:694797-694995:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:694419-694572:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:694176-694280:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:693818-693875:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:693437-693551:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:693194-693341:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:692909-693108:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:692686-692737:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:692451-692547:-1:exon

MBTPS1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: MBTPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(697907..721393)
location: region:697907-721393:-1
so has part: feature:697907-721393:-1:exon
subclass of: SO_0000010

116793343
type: Gene
SIO_000068: ncbigene

position:697907:-1
position: 697907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:721393:-1
position: 721393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:697907-721393:-1:exon

MBTPS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: MBTPS1
product: membrane bound transcription factor peptidase, site 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032701123.1
SIO_010081: MBTPS1
subclass of: SO_0000673
so part of: MBTPS1
location: complement(join(697907..698025,700303..700433,701106..701232,701728..701859,704191..704331,705840..705917,706351..706475,707301..707457,707856..707971,708610..708782,709327..709515,710580..710724,711293..711454,712381..712532,713239..713341,713938..714005,714978..715094,715468..715577,716791..716901,717275..717478,717878..718135,719220..719709,721298..721393))
location: region:697907-721393:-1
so has part: feature:721298-721393:-1:exon
so has part: feature:719220-719709:-1:exon
so has part: feature:717878-718135:-1:exon
so has part: feature:717275-717478:-1:exon
so has part: feature:716791-716901:-1:exon
so has part: feature:715468-715577:-1:exon
so has part: feature:714978-715094:-1:exon
so has part: feature:713938-714005:-1:exon
so has part: feature:713239-713341:-1:exon
so has part: feature:712381-712532:-1:exon
so has part: feature:711293-711454:-1:exon
so has part: feature:710580-710724:-1:exon
so has part: feature:709327-709515:-1:exon
so has part: feature:708610-708782:-1:exon
so has part: feature:707856-707971:-1:exon
so has part: feature:707301-707457:-1:exon
so has part: feature:706351-706475:-1:exon
so has part: feature:705840-705917:-1:exon
so has part: feature:704191-704331:-1:exon
so has part: feature:701728-701859:-1:exon
so has part: feature:701106-701232:-1:exon
so has part: feature:700303-700433:-1:exon
so has part: feature:697907-698025:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:721298-721393:-1:exon

position:721298:-1
position: 721298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:719220-719709:-1:exon

position:719220:-1
position: 719220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719709:-1
position: 719709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:717878-718135:-1:exon

position:717878:-1
position: 717878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718135:-1
position: 718135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:717275-717478:-1:exon

position:717275:-1
position: 717275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717478:-1
position: 717478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:716791-716901:-1:exon

position:716791:-1
position: 716791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:716901:-1
position: 716901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:715468-715577:-1:exon

position:715468:-1
position: 715468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715577:-1
position: 715577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:714978-715094:-1:exon

position:714978:-1
position: 714978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715094:-1
position: 715094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:713938-714005:-1:exon

position:713938:-1
position: 713938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:714005:-1
position: 714005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:713239-713341:-1:exon

position:713239:-1
position: 713239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713341:-1
position: 713341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:712381-712532:-1:exon

position:712381:-1
position: 712381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712532:-1
position: 712532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:711293-711454:-1:exon

position:711293:-1
position: 711293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711454:-1
position: 711454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:710580-710724:-1:exon

position:710580:-1
position: 710580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710724:-1
position: 710724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:709327-709515:-1:exon

position:709327:-1
position: 709327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709515:-1
position: 709515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:708610-708782:-1:exon

position:708610:-1
position: 708610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708782:-1
position: 708782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:707856-707971:-1:exon

position:707856:-1
position: 707856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707971:-1
position: 707971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:707301-707457:-1:exon

position:707301:-1
position: 707301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707457:-1
position: 707457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:706351-706475:-1:exon

position:706351:-1
position: 706351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:706475:-1
position: 706475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:705840-705917:-1:exon

position:705840:-1
position: 705840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705917:-1
position: 705917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:704191-704331:-1:exon

position:704191:-1
position: 704191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704331:-1
position: 704331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:701728-701859:-1:exon

position:701728:-1
position: 701728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:701859:-1
position: 701859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:701106-701232:-1:exon

position:701106:-1
position: 701106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:701232:-1
position: 701232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:700303-700433:-1:exon

position:700303:-1
position: 700303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700433:-1
position: 700433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:697907-698025:-1:exon

position:698025:-1
position: 698025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MBTPS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: MBTPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-bound transcription factor site-1 protease isoform X2
translation: MTMKFANIWFVLVVLLLCGKKHFGTRLGNSSQEAHICPGCSRLTLKVEFTSTVVEHEYIVAFNGYFTAKARSKFISSALKSGDIENWRIVPRNNPASDYPSDFEVIQIHEKQKDGVLTLEDHPNIKRVTPQRKVFRSLKYLESDPMLHCNETRWTQKWQSSRPLRRASLSLGSGFWHATGRHSSRRLLRAIPRQVAQTLQADVLWQMGYTGAGVRVAVFDTGLSEKHPHFKNVKERTNWTNERTLDDGLGHGTFVAGVIASMRECQGFAPNAELHIFRVFTNNQVSYTSWFLDAFNYAILKKIDVLNLSIGGPDFMDHPFVDKVWELTANNVIMVSAIGNDGPLYGTLNNPADQMDVIGVGGIDFEDNIARFSSRGMTTWELPGGYGRVKPDIVTYGSGVRGSGMKGGCRSLSGTSVASPVVAGAVTLLVSTVQRRELVNPASMKQALIASARRLPGVNMFEQGHGKLDLLRAYQILNSYKPQASLSPSYIDLTECPYMWPYCSQPIYYGGMPTIVNVTILNGMGVTGRIVDKPDWQPYLPQNGDNIEVAFSYSPVLWPWSGYLAISISVAKKAASWEGIAQGHVMITVSSPAENESKNSAEQTSTVKLPIKVKIIPTPPRSKRVLWDQYHNLRYPPGYFPRDNLRMKNDPLDWNGDHIHTNFRDMYQHLRSMGYFVEVLGSPFTCFDASQYGTLLMVDSEEEYFPEEITKLRRDVDNGLSLIVFSDWYNTSVMRKVKFYDENTRQWWMPDTGGANIPALNDLLSVWNMAFSDGLYEGDFTMASHEMNYASGCSIAKFPEDGIVIAQTFKDQGLEVLKQETAVIENVPILGLYQVPSEGGGRIVLYGDSNCLDDSHRQKDCFWLLDSLLQYTSYGVMPPSLSHSENRQRPPSGAGHSLPERMEGNHLHRYSKVLEAHLGDPKPRSLPACPHLSWAKPQPLNETAPSNLWKHQKLLSIDLDKVALPSFRQNRPQVRPLSPGESGAWDIPGAKL
SIO_010081: MBTPS1
subclass of: SO_0000673
so part of: MBTPS1
location: complement(join(698015..698025,700303..700433,701106..701232,701728..701859,704191..704331,705840..705917,706351..706475,707301..707457,707856..707971,708610..708782,709327..709515,710580..710724,711293..711454,712381..712532,713239..713341,713938..714005,714978..715094,715468..715577,716791..716901,717275..717478,717878..718135,719220..719388))
location: region:698015-719388:-1
so has part: feature:719220-719388:-1:exon
so has part: feature:717878-718135:-1:exon
so has part: feature:717275-717478:-1:exon
so has part: feature:716791-716901:-1:exon
so has part: feature:715468-715577:-1:exon
so has part: feature:714978-715094:-1:exon
so has part: feature:713938-714005:-1:exon
so has part: feature:713239-713341:-1:exon
so has part: feature:712381-712532:-1:exon
so has part: feature:711293-711454:-1:exon
so has part: feature:710580-710724:-1:exon
so has part: feature:709327-709515:-1:exon
so has part: feature:708610-708782:-1:exon
so has part: feature:707856-707971:-1:exon
so has part: feature:707301-707457:-1:exon
so has part: feature:706351-706475:-1:exon
so has part: feature:705840-705917:-1:exon
so has part: feature:704191-704331:-1:exon
so has part: feature:701728-701859:-1:exon
so has part: feature:701106-701232:-1:exon
so has part: feature:700303-700433:-1:exon
so has part: feature:698015-698025:-1:exon

XP_032557014.1
type: Protein
SIO_000068: ncbiprotein

position:698015:-1
position: 698015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719388:-1
position: 719388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:719220-719388:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:717878-718135:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:717275-717478:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:716791-716901:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:715468-715577:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:714978-715094:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:713938-714005:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:713239-713341:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:712381-712532:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:711293-711454:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:710580-710724:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:709327-709515:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:708610-708782:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:707856-707971:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:707301-707457:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:706351-706475:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:705840-705917:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:704191-704331:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:701728-701859:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:701106-701232:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:700303-700433:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:698015-698025:-1:exon

MBTPS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: MBTPS1
product: membrane bound transcription factor peptidase, site 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 mRNAs, 48 ESTs, 4 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032701122.1
SIO_010081: MBTPS1
subclass of: SO_0000673
so part of: MBTPS1
location: complement(join(698464..699283,700303..700433,701106..701232,701728..701859,704191..704331,705840..705917,706351..706475,707301..707457,707856..707971,708610..708782,709327..709515,710580..710724,711293..711454,712381..712532,713239..713341,713938..714005,714978..715094,715468..715577,716791..716901,717275..717478,717878..718135,719220..719709,721298..721393))
location: region:698464-721393:-1
so has part: feature:721298-721393:-1:exon
so has part: feature:719220-719709:-1:exon
so has part: feature:717878-718135:-1:exon
so has part: feature:717275-717478:-1:exon
so has part: feature:716791-716901:-1:exon
so has part: feature:715468-715577:-1:exon
so has part: feature:714978-715094:-1:exon
so has part: feature:713938-714005:-1:exon
so has part: feature:713239-713341:-1:exon
so has part: feature:712381-712532:-1:exon
so has part: feature:711293-711454:-1:exon
so has part: feature:710580-710724:-1:exon
so has part: feature:709327-709515:-1:exon
so has part: feature:708610-708782:-1:exon
so has part: feature:707856-707971:-1:exon
so has part: feature:707301-707457:-1:exon
so has part: feature:706351-706475:-1:exon
so has part: feature:705840-705917:-1:exon
so has part: feature:704191-704331:-1:exon
so has part: feature:701728-701859:-1:exon
so has part: feature:701106-701232:-1:exon
so has part: feature:700303-700433:-1:exon
so has part: feature:698464-699283:-1:exon

position:698464:-1
position: 698464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:721298-721393:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:719220-719709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:717878-718135:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:717275-717478:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:716791-716901:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:715468-715577:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:714978-715094:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:713938-714005:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:713239-713341:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:712381-712532:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:711293-711454:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:710580-710724:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:709327-709515:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:708610-708782:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:707856-707971:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:707301-707457:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:706351-706475:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:705840-705917:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:704191-704331:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:701728-701859:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:701106-701232:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:700303-700433:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:698464-699283:-1:exon

position:699283:-1
position: 699283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MBTPS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: MBTPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-bound transcription factor site-1 protease isoform X1
translation: MTMKFANIWFVLVVLLLCGKKHFGTRLGNSSQEAHICPGCSRLTLKVEFTSTVVEHEYIVAFNGYFTAKARSKFISSALKSGDIENWRIVPRNNPASDYPSDFEVIQIHEKQKDGVLTLEDHPNIKRVTPQRKVFRSLKYLESDPMLHCNETRWTQKWQSSRPLRRASLSLGSGFWHATGRHSSRRLLRAIPRQVAQTLQADVLWQMGYTGAGVRVAVFDTGLSEKHPHFKNVKERTNWTNERTLDDGLGHGTFVAGVIASMRECQGFAPNAELHIFRVFTNNQVSYTSWFLDAFNYAILKKIDVLNLSIGGPDFMDHPFVDKVWELTANNVIMVSAIGNDGPLYGTLNNPADQMDVIGVGGIDFEDNIARFSSRGMTTWELPGGYGRVKPDIVTYGSGVRGSGMKGGCRSLSGTSVASPVVAGAVTLLVSTVQRRELVNPASMKQALIASARRLPGVNMFEQGHGKLDLLRAYQILNSYKPQASLSPSYIDLTECPYMWPYCSQPIYYGGMPTIVNVTILNGMGVTGRIVDKPDWQPYLPQNGDNIEVAFSYSPVLWPWSGYLAISISVAKKAASWEGIAQGHVMITVSSPAENESKNSAEQTSTVKLPIKVKIIPTPPRSKRVLWDQYHNLRYPPGYFPRDNLRMKNDPLDWNGDHIHTNFRDMYQHLRSMGYFVEVLGSPFTCFDASQYGTLLMVDSEEEYFPEEITKLRRDVDNGLSLIVFSDWYNTSVMRKVKFYDENTRQWWMPDTGGANIPALNDLLSVWNMAFSDGLYEGDFTMASHEMNYASGCSIAKFPEDGIVIAQTFKDQGLEVLKQETAVIENVPILGLYQVPSEGGGRIVLYGDSNCLDDSHRQKDCFWLLDSLLQYTSYGVMPPSLSHSENRQRPPSGAGHSLPERMEGNHLHRYSKVLEAHLGDPKPRSLPACPHLSWAKPQPLNETAPSNLWKHQKLLSIDLDKVALPSFRQNRPQVRPLSPGESGAWDIPGGIMPGRYNQDVGQTIPVFAFLGAMVVLAFFVVQINKAKSRPKRRKPRVKRPQLMQQVHPPKTPSV
SIO_010081: MBTPS1
subclass of: SO_0000673
so part of: MBTPS1
location: complement(join(699087..699283,700303..700433,701106..701232,701728..701859,704191..704331,705840..705917,706351..706475,707301..707457,707856..707971,708610..708782,709327..709515,710580..710724,711293..711454,712381..712532,713239..713341,713938..714005,714978..715094,715468..715577,716791..716901,717275..717478,717878..718135,719220..719388))
location: region:699087-719388:-1
so has part: feature:719220-719388:-1:exon
so has part: feature:717878-718135:-1:exon
so has part: feature:717275-717478:-1:exon
so has part: feature:716791-716901:-1:exon
so has part: feature:715468-715577:-1:exon
so has part: feature:714978-715094:-1:exon
so has part: feature:713938-714005:-1:exon
so has part: feature:713239-713341:-1:exon
so has part: feature:712381-712532:-1:exon
so has part: feature:711293-711454:-1:exon
so has part: feature:710580-710724:-1:exon
so has part: feature:709327-709515:-1:exon
so has part: feature:708610-708782:-1:exon
so has part: feature:707856-707971:-1:exon
so has part: feature:707301-707457:-1:exon
so has part: feature:706351-706475:-1:exon
so has part: feature:705840-705917:-1:exon
so has part: feature:704191-704331:-1:exon
so has part: feature:701728-701859:-1:exon
so has part: feature:701106-701232:-1:exon
so has part: feature:700303-700433:-1:exon
so has part: feature:699087-699283:-1:exon

XP_032557013.1
type: Protein
SIO_000068: ncbiprotein

position:699087:-1
position: 699087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:719220-719388:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:717878-718135:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:717275-717478:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:716791-716901:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:715468-715577:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:714978-715094:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:713938-714005:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:713239-713341:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:712381-712532:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:711293-711454:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:710580-710724:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:709327-709515:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:708610-708782:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:707856-707971:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:707301-707457:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:706351-706475:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:705840-705917:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:704191-704331:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:701728-701859:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:701106-701232:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:700303-700433:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:699087-699283:-1:exon

HSDL1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: HSDL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(705191..744948)
location: region:705191-744948:-1
so has part: feature:705191-744948:-1:exon
subclass of: SO_0000010

116793349
type: Gene
SIO_000068: ncbigene

position:705191:-1
position: 705191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744948:-1
position: 744948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:705191-744948:-1:exon

HSDL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: HSDL1
product: hydroxysteroid dehydrogenase like 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032701146.1
SIO_010081: HSDL1
subclass of: SO_0000673
so part of: HSDL1
location: complement(join(705191..705202,722272..722403,723308..723535,725716..726161,726786..727018,727865..727879,744944..744948))
location: region:705191-744948:-1
so has part: feature:744944-744948:-1:exon
so has part: feature:727865-727879:-1:exon
so has part: feature:726786-727018:-1:exon
so has part: feature:725716-726161:-1:exon
so has part: feature:723308-723535:-1:exon
so has part: feature:722272-722403:-1:exon
so has part: feature:705191-705202:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:744944-744948:-1:exon

position:744944:-1
position: 744944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:727865-727879:-1:exon

position:727865:-1
position: 727865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727879:-1
position: 727879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:726786-727018:-1:exon

position:726786:-1
position: 726786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727018:-1
position: 727018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:725716-726161:-1:exon

position:725716:-1
position: 725716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:726161:-1
position: 726161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:723308-723535:-1:exon

position:723308:-1
position: 723308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723535:-1
position: 723535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:722272-722403:-1:exon

position:722272:-1
position: 722272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722403:-1
position: 722403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:705191-705202:-1:exon

position:705202:-1
position: 705202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HSDL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: HSDL1
product: hydroxysteroid dehydrogenase like 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032701140.1
SIO_010081: HSDL1
subclass of: SO_0000673
so part of: HSDL1
location: complement(join(722108..722403,723308..723535,725716..726161,726786..727018,727865..727879,744944..744948))
location: region:722108-744948:-1
so has part: feature:744944-744948:-1:exon
so has part: feature:727865-727879:-1:exon
so has part: feature:726786-727018:-1:exon
so has part: feature:725716-726161:-1:exon
so has part: feature:723308-723535:-1:exon
so has part: feature:722108-722403:-1:exon

position:722108:-1
position: 722108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:744944-744948:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:727865-727879:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:726786-727018:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:725716-726161:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:723308-723535:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:722108-722403:-1:exon

HSDL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: HSDL1
product: hydroxysteroid dehydrogenase like 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032701142.1
SIO_010081: HSDL1
subclass of: SO_0000673
so part of: HSDL1
location: complement(join(722108..722403,723308..723535,725716..726161,726786..727018,727957..728048))
location: region:722108-728048:-1
so has part: feature:727957-728048:-1:exon
so has part: feature:726786-727018:-1:exon
so has part: feature:725716-726161:-1:exon
so has part: feature:723308-723535:-1:exon
so has part: feature:722108-722403:-1:exon

position:728048:-1
position: 728048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:727957-728048:-1:exon

position:727957:-1
position: 727957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:726786-727018:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725716-726161:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:723308-723535:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:722108-722403:-1:exon

HSDL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: HSDL1
product: hydroxysteroid dehydrogenase like 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032701144.1
SIO_010081: HSDL1
subclass of: SO_0000673
so part of: HSDL1
location: complement(join(722108..722403,723308..723535,725716..726161,726786..727023,727999..728036))
location: region:722108-728036:-1
so has part: feature:727999-728036:-1:exon
so has part: feature:726786-727023:-1:exon
so has part: feature:725716-726161:-1:exon
so has part: feature:723308-723535:-1:exon
so has part: feature:722108-722403:-1:exon

position:728036:-1
position: 728036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:727999-728036:-1:exon

position:727999:-1
position: 727999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:726786-727023:-1:exon

position:727023:-1
position: 727023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:725716-726161:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:723308-723535:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:722108-722403:-1:exon

HSDL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: HSDL1
product: hydroxysteroid dehydrogenase like 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032701141.1
SIO_010081: HSDL1
subclass of: SO_0000673
so part of: HSDL1
location: complement(join(722108..722403,723308..723535,725716..726161,726786..727018,727865..727884,727999..728029))
location: region:722108-728029:-1
so has part: feature:727999-728029:-1:exon
so has part: feature:727865-727884:-1:exon
so has part: feature:726786-727018:-1:exon
so has part: feature:725716-726161:-1:exon
so has part: feature:723308-723535:-1:exon
so has part: feature:722108-722403:-1:exon

position:728029:-1
position: 728029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:727999-728029:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:727865-727884:-1:exon

position:727884:-1
position: 727884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:726786-727018:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:725716-726161:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:723308-723535:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:722108-722403:-1:exon

HSDL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: HSDL1
product: hydroxysteroid dehydrogenase like 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032701145.1
SIO_010081: HSDL1
subclass of: SO_0000673
so part of: HSDL1
location: complement(join(722108..722403,723308..723535,725716..726161,726786..727018,727819..727839))
location: region:722108-727839:-1
so has part: feature:727819-727839:-1:exon
so has part: feature:726786-727018:-1:exon
so has part: feature:725716-726161:-1:exon
so has part: feature:723308-723535:-1:exon
so has part: feature:722108-722403:-1:exon

position:727839:-1
position: 727839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:727819-727839:-1:exon

position:727819:-1
position: 727819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:726786-727018:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725716-726161:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:723308-723535:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:722108-722403:-1:exon

HSDL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: HSDL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive hydroxysteroid dehydrogenase-like protein 1
translation: MAAVDHFSLLYREISRSCSFYMEALALVGAWYTVRKCVSLACDTYSMLRLHVIPRLGGEVDLVRQYGQWAVVTGSTDGIGKAYAQELAKRGVNIILVSRNKEKLEAVSRSISETYNVETEFIVADFSKGREPYPAIKEALKDREIGILVNNVGMFAGYADYYTDLSEDMLWDTIHTNIASANMMTHIVLPGMVKKKKGAIVNISSVFCCQPTPLVTIYGASKIYLDYFSRAIHYEYASKGIFVQSLTPSTIATNMVAFNSWLNKRSFLFPSAEEYASHAVSTLGLSTRTSGFWKHELLFALAERLPERMWARLALYLGGIVREQALHPE
SIO_010081: HSDL1
subclass of: SO_0000673
so part of: HSDL1
location: complement(join(722308..722403,723308..723535,725716..726161,726786..727005))
location: region:722308-727005:-1
so has part: feature:726786-727005:-1:exon
so has part: feature:725716-726161:-1:exon
so has part: feature:723308-723535:-1:exon
so has part: feature:722308-722403:-1:exon

XP_032557031.1
type: Protein
SIO_000068: ncbiprotein

position:722308:-1
position: 722308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727005:-1
position: 727005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:726786-727005:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:725716-726161:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:723308-723535:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:722308-722403:-1:exon

HSDL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: HSDL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive hydroxysteroid dehydrogenase-like protein 1
translation: MAAVDHFSLLYREISRSCSFYMEALALVGAWYTVRKCVSLACDTYSMLRLHVIPRLGGEVDLVRQYGQWAVVTGSTDGIGKAYAQELAKRGVNIILVSRNKEKLEAVSRSISETYNVETEFIVADFSKGREPYPAIKEALKDREIGILVNNVGMFAGYADYYTDLSEDMLWDTIHTNIASANMMTHIVLPGMVKKKKGAIVNISSVFCCQPTPLVTIYGASKIYLDYFSRAIHYEYASKGIFVQSLTPSTIATNMVAFNSWLNKRSFLFPSAEEYASHAVSTLGLSTRTSGFWKHELLFALAERLPERMWARLALYLGGIVREQALHPE
SIO_010081: HSDL1
subclass of: SO_0000673
so part of: HSDL1
location: complement(join(722308..722403,723308..723535,725716..726161,726786..727005))
location: region:722308-727005:-1
so has part: feature:726786-727005:-1:exon
so has part: feature:725716-726161:-1:exon
so has part: feature:723308-723535:-1:exon
so has part: feature:722308-722403:-1:exon

XP_032557032.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:726786-727005:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:725716-726161:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:723308-723535:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:722308-722403:-1:exon

HSDL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: HSDL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive hydroxysteroid dehydrogenase-like protein 1
translation: MAAVDHFSLLYREISRSCSFYMEALALVGAWYTVRKCVSLACDTYSMLRLHVIPRLGGEVDLVRQYGQWAVVTGSTDGIGKAYAQELAKRGVNIILVSRNKEKLEAVSRSISETYNVETEFIVADFSKGREPYPAIKEALKDREIGILVNNVGMFAGYADYYTDLSEDMLWDTIHTNIASANMMTHIVLPGMVKKKKGAIVNISSVFCCQPTPLVTIYGASKIYLDYFSRAIHYEYASKGIFVQSLTPSTIATNMVAFNSWLNKRSFLFPSAEEYASHAVSTLGLSTRTSGFWKHELLFALAERLPERMWARLALYLGGIVREQALHPE
SIO_010081: HSDL1
subclass of: SO_0000673
so part of: HSDL1
location: complement(join(722308..722403,723308..723535,725716..726161,726786..727005))
location: region:722308-727005:-1
so has part: feature:726786-727005:-1:exon
so has part: feature:725716-726161:-1:exon
so has part: feature:723308-723535:-1:exon
so has part: feature:722308-722403:-1:exon

XP_032557033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:726786-727005:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:725716-726161:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:723308-723535:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:722308-722403:-1:exon

HSDL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: HSDL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive hydroxysteroid dehydrogenase-like protein 1
translation: MAAVDHFSLLYREISRSCSFYMEALALVGAWYTVRKCVSLACDTYSMLRLHVIPRLGGEVDLVRQYGQWAVVTGSTDGIGKAYAQELAKRGVNIILVSRNKEKLEAVSRSISETYNVETEFIVADFSKGREPYPAIKEALKDREIGILVNNVGMFAGYADYYTDLSEDMLWDTIHTNIASANMMTHIVLPGMVKKKKGAIVNISSVFCCQPTPLVTIYGASKIYLDYFSRAIHYEYASKGIFVQSLTPSTIATNMVAFNSWLNKRSFLFPSAEEYASHAVSTLGLSTRTSGFWKHELLFALAERLPERMWARLALYLGGIVREQALHPE
SIO_010081: HSDL1
subclass of: SO_0000673
so part of: HSDL1
location: complement(join(722308..722403,723308..723535,725716..726161,726786..727005))
location: region:722308-727005:-1
so has part: feature:726786-727005:-1:exon
so has part: feature:725716-726161:-1:exon
so has part: feature:723308-723535:-1:exon
so has part: feature:722308-722403:-1:exon

XP_032557035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:726786-727005:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:725716-726161:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:723308-723535:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:722308-722403:-1:exon

HSDL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: HSDL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive hydroxysteroid dehydrogenase-like protein 1
translation: MAAVDHFSLLYREISRSCSFYMEALALVGAWYTVRKCVSLACDTYSMLRLHVIPRLGGEVDLVRQYGQWAVVTGSTDGIGKAYAQELAKRGVNIILVSRNKEKLEAVSRSISETYNVETEFIVADFSKGREPYPAIKEALKDREIGILVNNVGMFAGYADYYTDLSEDMLWDTIHTNIASANMMTHIVLPGMVKKKKGAIVNISSVFCCQPTPLVTIYGASKIYLDYFSRAIHYEYASKGIFVQSLTPSTIATNMVAFNSWLNKRSFLFPSAEEYASHAVSTLGLSTRTSGFWKHELLFALAERLPERMWARLALYLGGIVREQALHPE
SIO_010081: HSDL1
subclass of: SO_0000673
so part of: HSDL1
location: complement(join(722308..722403,723308..723535,725716..726161,726786..727005))
location: region:722308-727005:-1
so has part: feature:726786-727005:-1:exon
so has part: feature:725716-726161:-1:exon
so has part: feature:723308-723535:-1:exon
so has part: feature:722308-722403:-1:exon

XP_032557036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:726786-727005:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:725716-726161:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:723308-723535:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:722308-722403:-1:exon

HSDL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: HSDL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive hydroxysteroid dehydrogenase-like protein 1
translation: MAAVDHFSLLYREISRSCSFYMEALALVGAWYTVRKCVSLACDTYSMLRLHVIPRLGGEVDLVRQYGQWAVVTGSTDGIGKAYAQELAKRGVNIILVSRNKEKLEAVSRSISETYNVETEFIVADFSKGREPYPAIKEALKDREIGILVNNVGMFAGYADYYTDLSEDMLWDTIHTNIASANMMTHIVLPGMVKKKKGAIVNISSVFCCQPTPLVTIYGASKIYLDYFSRAIHYEYASKGIFVQSLTPSTIATNMVAFNSWLNKRSFLFPSAEEYASHAVSTLGLSTRTSGFWKHELLFALAERLPERMWARLALYLGGIVREQALHPE
SIO_010081: HSDL1
subclass of: SO_0000673
so part of: HSDL1
location: complement(join(722308..722403,723308..723535,725716..726161,726786..727005))
location: region:722308-727005:-1
so has part: feature:726786-727005:-1:exon
so has part: feature:725716-726161:-1:exon
so has part: feature:723308-723535:-1:exon
so has part: feature:722308-722403:-1:exon

XP_032557037.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:726786-727005:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:725716-726161:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:723308-723535:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:722308-722403:-1:exon

DNAAF1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: DNAAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 728050..739664
location: region:728050-739664:1
so has part: feature:728050-739664:1:exon
subclass of: SO_0000010

116793344
type: Gene
SIO_000068: ncbigene

position:728050:1
position: 728050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739664:1
position: 739664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:728050-739664:1:exon

DNAAF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: DNAAF1
product: dynein axonemal assembly factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032701124.1
SIO_010081: DNAAF1
subclass of: SO_0000673
so part of: DNAAF1
location: join(728050..728329,728972..729097,729570..729705,730531..730622,731449..731670,732403..732569,732827..732948,733486..733700,734193..734444,735024..735133,737059..737127,738256..738610,738900..739059,739370..739664)
location: region:728050-739664:1
so has part: feature:728050-728329:1:exon
so has part: feature:728972-729097:1:exon
so has part: feature:729570-729705:1:exon
so has part: feature:730531-730622:1:exon
so has part: feature:731449-731670:1:exon
so has part: feature:732403-732569:1:exon
so has part: feature:732827-732948:1:exon
so has part: feature:733486-733700:1:exon
so has part: feature:734193-734444:1:exon
so has part: feature:735024-735133:1:exon
so has part: feature:737059-737127:1:exon
so has part: feature:738256-738610:1:exon
so has part: feature:738900-739059:1:exon
so has part: feature:739370-739664:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:728050-728329:1:exon

position:728329:1
position: 728329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:728972-729097:1:exon

position:728972:1
position: 728972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:729097:1
position: 729097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:729570-729705:1:exon

position:729570:1
position: 729570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:729705:1
position: 729705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:730531-730622:1:exon

position:730531:1
position: 730531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730622:1
position: 730622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:731449-731670:1:exon

position:731449:1
position: 731449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731670:1
position: 731670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:732403-732569:1:exon

position:732403:1
position: 732403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732569:1
position: 732569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:732827-732948:1:exon

position:732827:1
position: 732827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732948:1
position: 732948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:733486-733700:1:exon

position:733486:1
position: 733486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:733700:1
position: 733700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:734193-734444:1:exon

position:734193:1
position: 734193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:734444:1
position: 734444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:735024-735133:1:exon

position:735024:1
position: 735024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:735133:1
position: 735133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:737059-737127:1:exon

position:737059:1
position: 737059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:737127:1
position: 737127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:738256-738610:1:exon

position:738256:1
position: 738256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:738610:1
position: 738610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:738900-739059:1:exon

position:738900:1
position: 738900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739059:1
position: 739059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:739370-739664:1:exon

position:739370:1
position: 739370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DNAAF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: DNAAF1
product: dynein axonemal assembly factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032701125.1
SIO_010081: DNAAF1
subclass of: SO_0000673
so part of: DNAAF1
location: join(728050..728329,728972..729097,729570..729705,730531..730622,731449..731670,732403..732569,732827..732948,733486..733700,734193..734444,735024..735133,737059..737127,738259..738610,738900..739059,739370..739664)
location: region:728050-739664:1
so has part: feature:728050-728329:1:exon
so has part: feature:728972-729097:1:exon
so has part: feature:729570-729705:1:exon
so has part: feature:730531-730622:1:exon
so has part: feature:731449-731670:1:exon
so has part: feature:732403-732569:1:exon
so has part: feature:732827-732948:1:exon
so has part: feature:733486-733700:1:exon
so has part: feature:734193-734444:1:exon
so has part: feature:735024-735133:1:exon
so has part: feature:737059-737127:1:exon
so has part: feature:738259-738610:1:exon
so has part: feature:738900-739059:1:exon
so has part: feature:739370-739664:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:728050-728329:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:728972-729097:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:729570-729705:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:730531-730622:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:731449-731670:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:732403-732569:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:732827-732948:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:733486-733700:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:734193-734444:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:735024-735133:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:737059-737127:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:738259-738610:1:exon

position:738259:1
position: 738259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:738900-739059:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:739370-739664:1:exon

DNAAF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: DNAAF1
product: dynein axonemal assembly factor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032701126.1
SIO_010081: DNAAF1
subclass of: SO_0000673
so part of: DNAAF1
location: join(728050..728329,729570..729705,730531..730622,731449..731670,732403..732569,732827..732948,733486..733700,734193..734444,735024..735133,737059..737127,738256..738610,738900..739059,739370..739664)
location: region:728050-739664:1
so has part: feature:728050-728329:1:exon
so has part: feature:729570-729705:1:exon
so has part: feature:730531-730622:1:exon
so has part: feature:731449-731670:1:exon
so has part: feature:732403-732569:1:exon
so has part: feature:732827-732948:1:exon
so has part: feature:733486-733700:1:exon
so has part: feature:734193-734444:1:exon
so has part: feature:735024-735133:1:exon
so has part: feature:737059-737127:1:exon
so has part: feature:738256-738610:1:exon
so has part: feature:738900-739059:1:exon
so has part: feature:739370-739664:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:728050-728329:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:729570-729705:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:730531-730622:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:731449-731670:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:732403-732569:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:732827-732948:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:733486-733700:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:734193-734444:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:735024-735133:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:737059-737127:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:738256-738610:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:738900-739059:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:739370-739664:1:exon

DNAAF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: DNAAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein assembly factor 1, axonemal isoform X1
translation: MATVPVVAAGPGRAPSLPRRDLRAFGPQKSGPESGADSGAVRMEAPAAERADGGEVTAPEAAEAPPGDPTAGAAPSDREGSAGSTVQLEGPEQDSEEKNIEVAVNQRQHKDSVNECSSADTFQGVQKDVKTQEKAVNCVSRADQQNEQKSGVDQESATSSSSQRTAEKRGSVRMTKKTLLDICKQQKLYWTPYLNDTLYLHYKGFDRLENLEEYTGLRCLWLQCNGLRKIENLQAQTELRCLYLQLNLIEKIENLEPLQKLDSLNISNNYIKTIENLSCLKVLQTLQIAHNKLRTVEDIQHLQECPSISVLDLSHNSLSDPSIVTILETMPNLHVLNLMGNEVIRKIANYRKTLIVRLKQLTYLDDRPVFPKDRACAEAWAVGGLEAEKVEREKWETRERKKIQDSIDALAAMRQKAEENKRQKCMEEGDTSARCGNGDVTDILEGAPANSKDGDGNSNPSKPSNISEEEEAQEKTEKFKDEGFDVSDEVISLLPNREDNTSGNIPAGVQEDVQEPDFYKCADLNQEADDLPRQEAAPDKAQLPEGDEYAGMEQFKVETLEKLYLDELPDLEDVDVTEFPPEEEIFVQKQDYHPKIEIISEVTNDSDSALEENNKSTFEKSVEEVPTAIFSNVCKSHKEHEEEEHLRPLLESFFTEPANSERHLEIKDKKAAPLKPLIQEVVTEPKDHLLLSPVCHQPDDPSPWEGDGAGSDGEAPVMEGLAEGEGCPHRAPGDKDTESGLD
SIO_010081: DNAAF1
subclass of: SO_0000673
so part of: DNAAF1
location: join(728074..728329,728972..729097,729570..729705,730531..730622,731449..731670,732403..732569,732827..732948,733486..733700,734193..734444,735024..735133,737059..737127,738256..738610,738900..739006)
location: region:728074-739006:1
so has part: feature:728074-728329:1:exon
so has part: feature:728972-729097:1:exon
so has part: feature:729570-729705:1:exon
so has part: feature:730531-730622:1:exon
so has part: feature:731449-731670:1:exon
so has part: feature:732403-732569:1:exon
so has part: feature:732827-732948:1:exon
so has part: feature:733486-733700:1:exon
so has part: feature:734193-734444:1:exon
so has part: feature:735024-735133:1:exon
so has part: feature:737059-737127:1:exon
so has part: feature:738256-738610:1:exon
so has part: feature:738900-739006:1:exon

XP_032557015.1
type: Protein
SIO_000068: ncbiprotein

position:728074:1
position: 728074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739006:1
position: 739006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:728074-728329:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:728972-729097:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:729570-729705:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:730531-730622:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:731449-731670:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:732403-732569:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:732827-732948:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:733486-733700:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:734193-734444:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:735024-735133:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:737059-737127:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:738256-738610:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:738900-739006:1:exon

DNAAF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: DNAAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein assembly factor 1, axonemal isoform X2
translation: MATVPVVAAGPGRAPSLPRRDLRAFGPQKSGPESGADSGAVRMEAPAAERADGGEVTAPEAAEAPPGDPTAGAAPSDREGSAGSTVQLEGPEQDSEEKNIEVAVNQRQHKDSVNECSSADTFQGVQKDVKTQEKAVNCVSRADQQNEQKSGVDQESATSSSSQRTAEKRGSVRMTKKTLLDICKQQKLYWTPYLNDTLYLHYKGFDRLENLEEYTGLRCLWLQCNGLRKIENLQAQTELRCLYLQLNLIEKIENLEPLQKLDSLNISNNYIKTIENLSCLKVLQTLQIAHNKLRTVEDIQHLQECPSISVLDLSHNSLSDPSIVTILETMPNLHVLNLMGNEVIRKIANYRKTLIVRLKQLTYLDDRPVFPKDRACAEAWAVGGLEAEKVEREKWETRERKKIQDSIDALAAMRQKAEENKRQKCMEEGDTSARCGNGDVTDILEGAPANSKDGDGNSNPSKPSNISEEEEAQEKTEKFKDEGFDVSDEVISLLPNREDNTSGNIPAGVQEDVQEPDFYKCADLNQEADDLPRQEAAPDKAQLPEGDEYAGMEQFKVETLEKLYLDELPDLEDVDVTEFPPEEEIFVQKDYHPKIEIISEVTNDSDSALEENNKSTFEKSVEEVPTAIFSNVCKSHKEHEEEEHLRPLLESFFTEPANSERHLEIKDKKAAPLKPLIQEVVTEPKDHLLLSPVCHQPDDPSPWEGDGAGSDGEAPVMEGLAEGEGCPHRAPGDKDTESGLD
SIO_010081: DNAAF1
subclass of: SO_0000673
so part of: DNAAF1
location: join(728074..728329,728972..729097,729570..729705,730531..730622,731449..731670,732403..732569,732827..732948,733486..733700,734193..734444,735024..735133,737059..737127,738259..738610,738900..739006)
location: region:728074-739006:1
so has part: feature:728074-728329:1:exon
so has part: feature:728972-729097:1:exon
so has part: feature:729570-729705:1:exon
so has part: feature:730531-730622:1:exon
so has part: feature:731449-731670:1:exon
so has part: feature:732403-732569:1:exon
so has part: feature:732827-732948:1:exon
so has part: feature:733486-733700:1:exon
so has part: feature:734193-734444:1:exon
so has part: feature:735024-735133:1:exon
so has part: feature:737059-737127:1:exon
so has part: feature:738259-738610:1:exon
so has part: feature:738900-739006:1:exon

XP_032557016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:728074-728329:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:728972-729097:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:729570-729705:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:730531-730622:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:731449-731670:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:732403-732569:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:732827-732948:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:733486-733700:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:734193-734444:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:735024-735133:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:737059-737127:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:738259-738610:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:738900-739006:1:exon

DNAAF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: DNAAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein assembly factor 1, axonemal isoform X3
translation: MATVPVVAAGPGRAPSLPRRDLRAFGPQKSGPESGADSGAVRMEAPAAERADGGEVTAPEAAEAPPGDPTAGAAPSDREGSAGSTDVKTQEKAVNCVSRADQQNEQKSGVDQESATSSSSQRTAEKRGSVRMTKKTLLDICKQQKLYWTPYLNDTLYLHYKGFDRLENLEEYTGLRCLWLQCNGLRKIENLQAQTELRCLYLQLNLIEKIENLEPLQKLDSLNISNNYIKTIENLSCLKVLQTLQIAHNKLRTVEDIQHLQECPSISVLDLSHNSLSDPSIVTILETMPNLHVLNLMGNEVIRKIANYRKTLIVRLKQLTYLDDRPVFPKDRACAEAWAVGGLEAEKVEREKWETRERKKIQDSIDALAAMRQKAEENKRQKCMEEGDTSARCGNGDVTDILEGAPANSKDGDGNSNPSKPSNISEEEEAQEKTEKFKDEGFDVSDEVISLLPNREDNTSGNIPAGVQEDVQEPDFYKCADLNQEADDLPRQEAAPDKAQLPEGDEYAGMEQFKVETLEKLYLDELPDLEDVDVTEFPPEEEIFVQKQDYHPKIEIISEVTNDSDSALEENNKSTFEKSVEEVPTAIFSNVCKSHKEHEEEEHLRPLLESFFTEPANSERHLEIKDKKAAPLKPLIQEVVTEPKDHLLLSPVCHQPDDPSPWEGDGAGSDGEAPVMEGLAEGEGCPHRAPGDKDTESGLD
SIO_010081: DNAAF1
subclass of: SO_0000673
so part of: DNAAF1
location: join(728074..728329,729570..729705,730531..730622,731449..731670,732403..732569,732827..732948,733486..733700,734193..734444,735024..735133,737059..737127,738256..738610,738900..739006)
location: region:728074-739006:1
so has part: feature:728074-728329:1:exon
so has part: feature:729570-729705:1:exon
so has part: feature:730531-730622:1:exon
so has part: feature:731449-731670:1:exon
so has part: feature:732403-732569:1:exon
so has part: feature:732827-732948:1:exon
so has part: feature:733486-733700:1:exon
so has part: feature:734193-734444:1:exon
so has part: feature:735024-735133:1:exon
so has part: feature:737059-737127:1:exon
so has part: feature:738256-738610:1:exon
so has part: feature:738900-739006:1:exon

XP_032557017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:728074-728329:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:729570-729705:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:730531-730622:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:731449-731670:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:732403-732569:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:732827-732948:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:733486-733700:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:734193-734444:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:735024-735133:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:737059-737127:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:738256-738610:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:738900-739006:1:exon

HSF4
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: HSF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(743108..764610)
location: region:743108-764610:-1
so has part: feature:743108-764610:-1:exon
subclass of: SO_0000010

116793345
type: Gene
SIO_000068: ncbigene

position:743108:-1
position: 743108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:764610:-1
position: 764610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743108-764610:-1:exon

HSF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: HSF4
product: heat shock transcription factor 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032701131.1
SIO_010081: HSF4
subclass of: SO_0000673
so part of: HSF4
location: complement(join(743108..743393,744545..744632,745005..745073,746386..746491,749775..749899,750667..750766,752104..752168,753590..753665,755921..756045,756918..757045,758094..758202,762455..764610))
location: region:743108-764610:-1
so has part: feature:762455-764610:-1:exon
so has part: feature:758094-758202:-1:exon
so has part: feature:756918-757045:-1:exon
so has part: feature:755921-756045:-1:exon
so has part: feature:753590-753665:-1:exon
so has part: feature:752104-752168:-1:exon
so has part: feature:750667-750766:-1:exon
so has part: feature:749775-749899:-1:exon
so has part: feature:746386-746491:-1:exon
so has part: feature:745005-745073:-1:exon
so has part: feature:744545-744632:-1:exon
so has part: feature:743108-743393:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:762455-764610:-1:exon

position:762455:-1
position: 762455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:758094-758202:-1:exon

position:758094:-1
position: 758094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758202:-1
position: 758202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:756918-757045:-1:exon

position:756918:-1
position: 756918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:757045:-1
position: 757045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:755921-756045:-1:exon

position:755921:-1
position: 755921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:756045:-1
position: 756045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:753590-753665:-1:exon

position:753590:-1
position: 753590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:753665:-1
position: 753665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:752104-752168:-1:exon

position:752104:-1
position: 752104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:752168:-1
position: 752168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:750667-750766:-1:exon

position:750667:-1
position: 750667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:750766:-1
position: 750766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:749775-749899:-1:exon

position:749775:-1
position: 749775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:749899:-1
position: 749899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:746386-746491:-1:exon

position:746386:-1
position: 746386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:746491:-1
position: 746491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:745005-745073:-1:exon

position:745005:-1
position: 745005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:745073:-1
position: 745073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:744545-744632:-1:exon

position:744545:-1
position: 744545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744632:-1
position: 744632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:743108-743393:-1:exon

position:743393:-1
position: 743393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HSF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: HSF4
product: heat shock transcription factor 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032701129.1
SIO_010081: HSF4
subclass of: SO_0000673
so part of: HSF4
location: complement(join(743108..743393,744545..744632,745005..745070,746386..746491,747722..747943,749775..749899,750667..750766,752104..752168,753590..753665,755921..756045,756918..757045,758094..758202,762455..764610))
location: region:743108-764610:-1
so has part: feature:762455-764610:-1:exon
so has part: feature:758094-758202:-1:exon
so has part: feature:756918-757045:-1:exon
so has part: feature:755921-756045:-1:exon
so has part: feature:753590-753665:-1:exon
so has part: feature:752104-752168:-1:exon
so has part: feature:750667-750766:-1:exon
so has part: feature:749775-749899:-1:exon
so has part: feature:747722-747943:-1:exon
so has part: feature:746386-746491:-1:exon
so has part: feature:745005-745070:-1:exon
so has part: feature:744545-744632:-1:exon
so has part: feature:743108-743393:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:762455-764610:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:758094-758202:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:756918-757045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:755921-756045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:753590-753665:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:752104-752168:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:750667-750766:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:749775-749899:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:747722-747943:-1:exon

position:747722:-1
position: 747722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:747943:-1
position: 747943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:746386-746491:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:745005-745070:-1:exon

position:745070:-1
position: 745070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:744545-744632:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:743108-743393:-1:exon

HSF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: HSF4
product: heat shock transcription factor 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032701127.1
SIO_010081: HSF4
subclass of: SO_0000673
so part of: HSF4
location: complement(join(743108..743393,744545..744632,745005..745073,746386..746491,747722..747943,749775..749899,750667..750766,752104..752168,753590..753665,755921..756045,756918..757045,758094..758202,762455..764610))
location: region:743108-764610:-1
so has part: feature:762455-764610:-1:exon
so has part: feature:758094-758202:-1:exon
so has part: feature:756918-757045:-1:exon
so has part: feature:755921-756045:-1:exon
so has part: feature:753590-753665:-1:exon
so has part: feature:752104-752168:-1:exon
so has part: feature:750667-750766:-1:exon
so has part: feature:749775-749899:-1:exon
so has part: feature:747722-747943:-1:exon
so has part: feature:746386-746491:-1:exon
so has part: feature:745005-745073:-1:exon
so has part: feature:744545-744632:-1:exon
so has part: feature:743108-743393:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:762455-764610:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:758094-758202:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:756918-757045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:755921-756045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:753590-753665:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:752104-752168:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:750667-750766:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:749775-749899:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:747722-747943:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:746386-746491:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:745005-745073:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:744545-744632:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:743108-743393:-1:exon

HSF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: HSF4
product: heat shock transcription factor 4, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032701134.1
SIO_010081: HSF4
subclass of: SO_0000673
so part of: HSF4
location: complement(join(743108..743393,744545..744632,745005..745070,746386..746491,747722..747943,749775..749899,750667..750766,752104..752168,753590..753665,755921..756045,756918..757045,758094..758202,761145..762439))
location: region:743108-762439:-1
so has part: feature:761145-762439:-1:exon
so has part: feature:758094-758202:-1:exon
so has part: feature:756918-757045:-1:exon
so has part: feature:755921-756045:-1:exon
so has part: feature:753590-753665:-1:exon
so has part: feature:752104-752168:-1:exon
so has part: feature:750667-750766:-1:exon
so has part: feature:749775-749899:-1:exon
so has part: feature:747722-747943:-1:exon
so has part: feature:746386-746491:-1:exon
so has part: feature:745005-745070:-1:exon
so has part: feature:744545-744632:-1:exon
so has part: feature:743108-743393:-1:exon

position:762439:-1
position: 762439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:761145-762439:-1:exon

position:761145:-1
position: 761145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:758094-758202:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:756918-757045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:755921-756045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:753590-753665:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:752104-752168:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:750667-750766:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:749775-749899:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:747722-747943:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:746386-746491:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:745005-745070:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:744545-744632:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:743108-743393:-1:exon

HSF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: HSF4
product: heat shock transcription factor 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032701130.1
SIO_010081: HSF4
subclass of: SO_0000673
so part of: HSF4
location: complement(join(743108..743393,744545..744632,745005..745073,746386..746491,747722..747943,749775..749899,750667..750766,752104..752168,753590..753665,755921..756045,756918..757045,758094..758202,759299..759446))
location: region:743108-759446:-1
so has part: feature:759299-759446:-1:exon
so has part: feature:758094-758202:-1:exon
so has part: feature:756918-757045:-1:exon
so has part: feature:755921-756045:-1:exon
so has part: feature:753590-753665:-1:exon
so has part: feature:752104-752168:-1:exon
so has part: feature:750667-750766:-1:exon
so has part: feature:749775-749899:-1:exon
so has part: feature:747722-747943:-1:exon
so has part: feature:746386-746491:-1:exon
so has part: feature:745005-745073:-1:exon
so has part: feature:744545-744632:-1:exon
so has part: feature:743108-743393:-1:exon

position:759446:-1
position: 759446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:759299-759446:-1:exon

position:759299:-1
position: 759299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:758094-758202:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:756918-757045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:755921-756045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:753590-753665:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:752104-752168:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:750667-750766:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:749775-749899:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:747722-747943:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:746386-746491:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:745005-745073:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:744545-744632:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:743108-743393:-1:exon

HSF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: HSF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock factor protein 4 isoform X4
translation: MGCSRSSPLCWPLHRAQNGTSFHVFDQGRFAKEVLPKYFKHNNMASFVRQLNMYGFRKVVNIEQGGLVKPERDDTEFQHLCFLQGHEHLLEHIKRKVSVVKSEETKMRQEDLSRLLYEVQILRSQQENMECQVQDMKQQNEVLWREVVSLRQNHSQQQKVINKLIQFLFGQLQSSPSSTGIKRKLPLMLDNGISTPPVSKFSRHLSAEPLHDPYFIQSPSTEPASCLNSPGIAGGPIISDVTEASPSNIINMQPPPENDRTDISDPLEGTDWSLEGLQLLLRSQQYGLEPASLLDQVFNPNLSLSEWNMTEMEASLSPMQRLTVDLEKNATELPPKVFNAPFNSTCPGKDVILENAQQFLIDRQSIFGNDLLSLPESSSLYVPPENVASYLSSVGVQGDIPLNLSSSTDNSQ
SIO_010081: HSF4
subclass of: SO_0000673
so part of: HSF4
location: complement(join(743197..743393,744545..744632,745005..745073,746386..746491,749775..749899,750667..750766,752104..752168,753590..753665,755921..756045,756918..757045,758094..758202,762455..762505))
location: region:743197-762505:-1
so has part: feature:762455-762505:-1:exon
so has part: feature:758094-758202:-1:exon
so has part: feature:756918-757045:-1:exon
so has part: feature:755921-756045:-1:exon
so has part: feature:753590-753665:-1:exon
so has part: feature:752104-752168:-1:exon
so has part: feature:750667-750766:-1:exon
so has part: feature:749775-749899:-1:exon
so has part: feature:746386-746491:-1:exon
so has part: feature:745005-745073:-1:exon
so has part: feature:744545-744632:-1:exon
so has part: feature:743197-743393:-1:exon

XP_032557022.1
type: Protein
SIO_000068: ncbiprotein

position:743197:-1
position: 743197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:762505:-1
position: 762505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:762455-762505:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:758094-758202:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:756918-757045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:755921-756045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:753590-753665:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:752104-752168:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:750667-750766:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:749775-749899:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:746386-746491:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:745005-745073:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:744545-744632:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:743197-743393:-1:exon

HSF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: HSF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock factor protein 4 isoform X2
translation: MGCSRSSPLCWPLHRAQNGTSFHVFDQGRFAKEVLPKYFKHNNMASFVRQLNMYGFRKVVNIEQGGLVKPERDDTEFQHLCFLQGHEHLLEHIKRKVSVVKSEETKMRQEDLSRLLYEVQILRSQQENMECQVQDMKQQNEVLWREVVSLRQNHSQQQKVINKLIQFLFGQLQSSPSSTGIKRKLPLMLDNGISTPPVSKFSRHLSAEPLHDPYFIQSPSTEPASCLNSPGIAGGPIISDVTEASPSNIINMQPPPENDREKCLMLIKEEPVSPGVKGTAEPDVPLPGCRACPEPPVLPVAMVQSVLEGKGGCAAAPGTSQPPERRGRRALLDRTDISDPLEGTDWSLEGLQLLLRSQQYGLEPASLLDVFNPNLSLSEWNMTEMEASLSPMQRLTVDLEKNATELPPKVFNAPFNSTCPGKDVILENAQQFLIDRQSIFGNDLLSLPESSSLYVPPENVASYLSSVGVQGDIPLNLSSSTDNSQ
SIO_010081: HSF4
subclass of: SO_0000673
so part of: HSF4
location: complement(join(743197..743393,744545..744632,745005..745070,746386..746491,747722..747943,749775..749899,750667..750766,752104..752168,753590..753665,755921..756045,756918..757045,758094..758202,762455..762505))
location: region:743197-762505:-1
so has part: feature:762455-762505:-1:exon
so has part: feature:758094-758202:-1:exon
so has part: feature:756918-757045:-1:exon
so has part: feature:755921-756045:-1:exon
so has part: feature:753590-753665:-1:exon
so has part: feature:752104-752168:-1:exon
so has part: feature:750667-750766:-1:exon
so has part: feature:749775-749899:-1:exon
so has part: feature:747722-747943:-1:exon
so has part: feature:746386-746491:-1:exon
so has part: feature:745005-745070:-1:exon
so has part: feature:744545-744632:-1:exon
so has part: feature:743197-743393:-1:exon

XP_032557020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:762455-762505:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:758094-758202:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:756918-757045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:755921-756045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:753590-753665:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:752104-752168:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:750667-750766:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:749775-749899:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:747722-747943:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:746386-746491:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:745005-745070:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:744545-744632:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:743197-743393:-1:exon

HSF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: HSF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock factor protein 4 isoform X1
translation: MGCSRSSPLCWPLHRAQNGTSFHVFDQGRFAKEVLPKYFKHNNMASFVRQLNMYGFRKVVNIEQGGLVKPERDDTEFQHLCFLQGHEHLLEHIKRKVSVVKSEETKMRQEDLSRLLYEVQILRSQQENMECQVQDMKQQNEVLWREVVSLRQNHSQQQKVINKLIQFLFGQLQSSPSSTGIKRKLPLMLDNGISTPPVSKFSRHLSAEPLHDPYFIQSPSTEPASCLNSPGIAGGPIISDVTEASPSNIINMQPPPENDREKCLMLIKEEPVSPGVKGTAEPDVPLPGCRACPEPPVLPVAMVQSVLEGKGGCAAAPGTSQPPERRGRRALLDRTDISDPLEGTDWSLEGLQLLLRSQQYGLEPASLLDQVFNPNLSLSEWNMTEMEASLSPMQRLTVDLEKNATELPPKVFNAPFNSTCPGKDVILENAQQFLIDRQSIFGNDLLSLPESSSLYVPPENVASYLSSVGVQGDIPLNLSSSTDNSQ
SIO_010081: HSF4
subclass of: SO_0000673
so part of: HSF4
location: complement(join(743197..743393,744545..744632,745005..745073,746386..746491,747722..747943,749775..749899,750667..750766,752104..752168,753590..753665,755921..756045,756918..757045,758094..758202,762455..762505))
location: region:743197-762505:-1
so has part: feature:762455-762505:-1:exon
so has part: feature:758094-758202:-1:exon
so has part: feature:756918-757045:-1:exon
so has part: feature:755921-756045:-1:exon
so has part: feature:753590-753665:-1:exon
so has part: feature:752104-752168:-1:exon
so has part: feature:750667-750766:-1:exon
so has part: feature:749775-749899:-1:exon
so has part: feature:747722-747943:-1:exon
so has part: feature:746386-746491:-1:exon
so has part: feature:745005-745073:-1:exon
so has part: feature:744545-744632:-1:exon
so has part: feature:743197-743393:-1:exon

XP_032557018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:762455-762505:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:758094-758202:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:756918-757045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:755921-756045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:753590-753665:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:752104-752168:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:750667-750766:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:749775-749899:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:747722-747943:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:746386-746491:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:745005-745073:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:744545-744632:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:743197-743393:-1:exon

HSF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: HSF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock factor protein 4 isoform X7
translation: MQDSPSSLVMDGYSSNVPAFLTKLWTLVEDPETNHLICWSSNGTSFHVFDQGRFAKEVLPKYFKHNNMASFVRQLNMYGFRKVVNIEQGGLVKPERDDTEFQHLCFLQGHEHLLEHIKRKVSVVKSEETKMRQEDLSRLLYEVQILRSQQENMECQVQDMKQQNEVLWREVVSLRQNHSQQQKVINKLIQFLFGQLQSSPSSTGIKRKLPLMLDNGISTPPVSKFSRHLSAEPLHDPYFIQSPSTEPASCLNSPGIAGGPIISDVTEASPSNIINMQPPPENDREKCLMLIKEEPVSPGVKGTAEPDVPLPGCRACPEPPVLPVAMVQSVLEGKGGCAAAPGTSQPPERRGRRALLDRTDISDPLEGTDWSLEGLQLLLRSQQYGLEPASLLDVFNPNLSLSEWNMTEMEASLSPMQRLTVDLEKNATELPPKVFNAPFNSTCPGKDVILENAQQFLIDRQSIFGNDLLSLPESSSLYVPPENVASYLSSVGVQGDIPLNLSSSTDNSQ
SIO_010081: HSF4
subclass of: SO_0000673
so part of: HSF4
location: complement(join(743197..743393,744545..744632,745005..745070,746386..746491,747722..747943,749775..749899,750667..750766,752104..752168,753590..753665,755921..756045,756918..757045,758094..758202,761145..761267))
location: region:743197-761267:-1
so has part: feature:761145-761267:-1:exon
so has part: feature:758094-758202:-1:exon
so has part: feature:756918-757045:-1:exon
so has part: feature:755921-756045:-1:exon
so has part: feature:753590-753665:-1:exon
so has part: feature:752104-752168:-1:exon
so has part: feature:750667-750766:-1:exon
so has part: feature:749775-749899:-1:exon
so has part: feature:747722-747943:-1:exon
so has part: feature:746386-746491:-1:exon
so has part: feature:745005-745070:-1:exon
so has part: feature:744545-744632:-1:exon
so has part: feature:743197-743393:-1:exon

XP_032557025.1
type: Protein
SIO_000068: ncbiprotein

position:761267:-1
position: 761267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:761145-761267:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:758094-758202:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:756918-757045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:755921-756045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:753590-753665:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:752104-752168:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:750667-750766:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:749775-749899:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:747722-747943:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:746386-746491:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:745005-745070:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:744545-744632:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:743197-743393:-1:exon

HSF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: HSF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock factor protein 4 isoform X3
translation: MASFVRQLNMYGFRKVVNIEQGGLVKPERDDTEFQHLCFLQGHEHLLEHIKRKVSVVKSEETKMRQEDLSRLLYEVQILRSQQENMECQVQDMKQQNEVLWREVVSLRQNHSQQQKVINKLIQFLFGQLQSSPSSTGIKRKLPLMLDNGISTPPVSKFSRHLSAEPLHDPYFIQSPSTEPASCLNSPGIAGGPIISDVTEASPSNIINMQPPPENDREKCLMLIKEEPVSPGVKGTAEPDVPLPGCRACPEPPVLPVAMVQSVLEGKGGCAAAPGTSQPPERRGRRALLDRTDISDPLEGTDWSLEGLQLLLRSQQYGLEPASLLDQVFNPNLSLSEWNMTEMEASLSPMQRLTVDLEKNATELPPKVFNAPFNSTCPGKDVILENAQQFLIDRQSIFGNDLLSLPESSSLYVPPENVASYLSSVGVQGDIPLNLSSSTDNSQ
SIO_010081: HSF4
subclass of: SO_0000673
so part of: HSF4
location: complement(join(743197..743393,744545..744632,745005..745073,746386..746491,747722..747943,749775..749899,750667..750766,752104..752168,753590..753665,755921..756045,756918..757045,758094..758124))
location: region:743197-758124:-1
so has part: feature:758094-758124:-1:exon
so has part: feature:756918-757045:-1:exon
so has part: feature:755921-756045:-1:exon
so has part: feature:753590-753665:-1:exon
so has part: feature:752104-752168:-1:exon
so has part: feature:750667-750766:-1:exon
so has part: feature:749775-749899:-1:exon
so has part: feature:747722-747943:-1:exon
so has part: feature:746386-746491:-1:exon
so has part: feature:745005-745073:-1:exon
so has part: feature:744545-744632:-1:exon
so has part: feature:743197-743393:-1:exon

XP_032557021.1
type: Protein
SIO_000068: ncbiprotein

position:758124:-1
position: 758124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:758094-758124:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:756918-757045:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:755921-756045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:753590-753665:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:752104-752168:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:750667-750766:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:749775-749899:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:747722-747943:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:746386-746491:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:745005-745073:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:744545-744632:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:743197-743393:-1:exon

HSF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: HSF4
product: heat shock transcription factor 4, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032701133.1
SIO_010081: HSF4
subclass of: SO_0000673
so part of: HSF4
location: complement(join(743284..743393,744545..744651,745005..745070,746386..746491,747722..747943,749775..749899,750667..750766,752104..752168,753590..753665,755921..756045,756918..757045,758094..758202,762455..764610))
location: region:743284-764610:-1
so has part: feature:762455-764610:-1:exon
so has part: feature:758094-758202:-1:exon
so has part: feature:756918-757045:-1:exon
so has part: feature:755921-756045:-1:exon
so has part: feature:753590-753665:-1:exon
so has part: feature:752104-752168:-1:exon
so has part: feature:750667-750766:-1:exon
so has part: feature:749775-749899:-1:exon
so has part: feature:747722-747943:-1:exon
so has part: feature:746386-746491:-1:exon
so has part: feature:745005-745070:-1:exon
so has part: feature:744545-744651:-1:exon
so has part: feature:743284-743393:-1:exon

position:743284:-1
position: 743284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:762455-764610:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:758094-758202:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:756918-757045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:755921-756045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:753590-753665:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:752104-752168:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:750667-750766:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:749775-749899:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:747722-747943:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:746386-746491:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:745005-745070:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:744545-744651:-1:exon

position:744651:-1
position: 744651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:743284-743393:-1:exon

HSF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: HSF4
product: heat shock transcription factor 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032701132.1
SIO_010081: HSF4
subclass of: SO_0000673
so part of: HSF4
location: complement(join(743284..743393,744545..744651,745005..745073,746386..746491,747722..747943,749775..749899,750667..750766,752104..752168,753590..753665,755921..756045,756918..757045,758094..758202,762455..764610))
location: region:743284-764610:-1
so has part: feature:762455-764610:-1:exon
so has part: feature:758094-758202:-1:exon
so has part: feature:756918-757045:-1:exon
so has part: feature:755921-756045:-1:exon
so has part: feature:753590-753665:-1:exon
so has part: feature:752104-752168:-1:exon
so has part: feature:750667-750766:-1:exon
so has part: feature:749775-749899:-1:exon
so has part: feature:747722-747943:-1:exon
so has part: feature:746386-746491:-1:exon
so has part: feature:745005-745073:-1:exon
so has part: feature:744545-744651:-1:exon
so has part: feature:743284-743393:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:762455-764610:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:758094-758202:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:756918-757045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:755921-756045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:753590-753665:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:752104-752168:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:750667-750766:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:749775-749899:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:747722-747943:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:746386-746491:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:745005-745073:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:744545-744651:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:743284-743393:-1:exon

HSF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: HSF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock factor protein 4 isoform X6
translation: MGCSRSSPLCWPLHRAQNGTSFHVFDQGRFAKEVLPKYFKHNNMASFVRQLNMYGFRKVVNIEQGGLVKPERDDTEFQHLCFLQGHEHLLEHIKRKVSVVKSEETKMRQEDLSRLLYEVQILRSQQENMECQVQDMKQQNEVLWREVVSLRQNHSQQQKVINKLIQFLFGQLQSSPSSTGIKRKLPLMLDNGISTPPVSKFSRHLSAEPLHDPYFIQSPSTEPASCLNSPGIAGGPIISDVTEASPSNIINMQPPPENDREKCLMLIKEEPVSPGVKGTAEPDVPLPGCRACPEPPVLPVAMVQSVLEGKGGCAAAPGTSQPPERRGRRALLDRTDISDPLEGTDWSLEGLQLLLRSQQYGLEPASLLDVFNPNLSLSEWNMTEMEASLSPFIFLHQDAATHSGSGEECN
SIO_010081: HSF4
subclass of: SO_0000673
so part of: HSF4
location: complement(join(744592..744651,745005..745070,746386..746491,747722..747943,749775..749899,750667..750766,752104..752168,753590..753665,755921..756045,756918..757045,758094..758202,762455..762505))
location: region:744592-762505:-1
so has part: feature:762455-762505:-1:exon
so has part: feature:758094-758202:-1:exon
so has part: feature:756918-757045:-1:exon
so has part: feature:755921-756045:-1:exon
so has part: feature:753590-753665:-1:exon
so has part: feature:752104-752168:-1:exon
so has part: feature:750667-750766:-1:exon
so has part: feature:749775-749899:-1:exon
so has part: feature:747722-747943:-1:exon
so has part: feature:746386-746491:-1:exon
so has part: feature:745005-745070:-1:exon
so has part: feature:744592-744651:-1:exon

XP_032557024.1
type: Protein
SIO_000068: ncbiprotein

position:744592:-1
position: 744592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:762455-762505:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:758094-758202:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:756918-757045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:755921-756045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:753590-753665:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:752104-752168:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:750667-750766:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:749775-749899:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:747722-747943:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:746386-746491:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:745005-745070:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:744592-744651:-1:exon

HSF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: HSF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock factor protein 4 isoform X5
translation: MGCSRSSPLCWPLHRAQNGTSFHVFDQGRFAKEVLPKYFKHNNMASFVRQLNMYGFRKVVNIEQGGLVKPERDDTEFQHLCFLQGHEHLLEHIKRKVSVVKSEETKMRQEDLSRLLYEVQILRSQQENMECQVQDMKQQNEVLWREVVSLRQNHSQQQKVINKLIQFLFGQLQSSPSSTGIKRKLPLMLDNGISTPPVSKFSRHLSAEPLHDPYFIQSPSTEPASCLNSPGIAGGPIISDVTEASPSNIINMQPPPENDREKCLMLIKEEPVSPGVKGTAEPDVPLPGCRACPEPPVLPVAMVQSVLEGKGGCAAAPGTSQPPERRGRRALLDRTDISDPLEGTDWSLEGLQLLLRSQQYGLEPASLLDQVFNPNLSLSEWNMTEMEASLSPFIFLHQDAATHSGSGEECN
SIO_010081: HSF4
subclass of: SO_0000673
so part of: HSF4
location: complement(join(744592..744651,745005..745073,746386..746491,747722..747943,749775..749899,750667..750766,752104..752168,753590..753665,755921..756045,756918..757045,758094..758202,762455..762505))
location: region:744592-762505:-1
so has part: feature:762455-762505:-1:exon
so has part: feature:758094-758202:-1:exon
so has part: feature:756918-757045:-1:exon
so has part: feature:755921-756045:-1:exon
so has part: feature:753590-753665:-1:exon
so has part: feature:752104-752168:-1:exon
so has part: feature:750667-750766:-1:exon
so has part: feature:749775-749899:-1:exon
so has part: feature:747722-747943:-1:exon
so has part: feature:746386-746491:-1:exon
so has part: feature:745005-745073:-1:exon
so has part: feature:744592-744651:-1:exon

XP_032557023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:762455-762505:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:758094-758202:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:756918-757045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:755921-756045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:753590-753665:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:752104-752168:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:750667-750766:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:749775-749899:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:747722-747943:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:746386-746491:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:745005-745073:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:744592-744651:-1:exon

TRADD
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: TRADD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 765369..775667
location: region:765369-775667:1
so has part: feature:765369-775667:1:exon
subclass of: SO_0000010

116793350
type: Gene
SIO_000068: ncbigene

position:765369:1
position: 765369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:775667:1
position: 775667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:765369-775667:1:exon

TRADD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: TRADD
product: TNFRSF1A associated via death domain, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032701149.1
SIO_010081: TRADD
subclass of: SO_0000673
so part of: TRADD
location: join(765369..765465,766661..766812,768435..768712,770361..770553,771780..775667)
location: region:765369-775667:1
so has part: feature:765369-765465:1:exon
so has part: feature:766661-766812:1:exon
so has part: feature:768435-768712:1:exon
so has part: feature:770361-770553:1:exon
so has part: feature:771780-775667:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:765369-765465:1:exon

position:765465:1
position: 765465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:766661-766812:1:exon

position:766661:1
position: 766661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:766812:1
position: 766812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:768435-768712:1:exon

position:768435:1
position: 768435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:768712:1
position: 768712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:770361-770553:1:exon

position:770361:1
position: 770361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:770553:1
position: 770553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:771780-775667:1:exon

position:771780:1
position: 771780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRADD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: TRADD
product: TNFRSF1A associated via death domain, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032701147.1
SIO_010081: TRADD
subclass of: SO_0000673
so part of: TRADD
location: join(765622..765753,766661..766812,768435..768712,770361..770553,771780..775667)
location: region:765622-775667:1
so has part: feature:765622-765753:1:exon
so has part: feature:766661-766812:1:exon
so has part: feature:768435-768712:1:exon
so has part: feature:770361-770553:1:exon
so has part: feature:771780-775667:1:exon

position:765622:1
position: 765622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:765622-765753:1:exon

position:765753:1
position: 765753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:766661-766812:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:768435-768712:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:770361-770553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:771780-775667:1:exon

TRADD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: TRADD
product: TNFRSF1A associated via death domain, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032701148.1
SIO_010081: TRADD
subclass of: SO_0000673
so part of: TRADD
location: join(766088..766550,766661..766812,768435..768712,770361..770553,771780..775667)
location: region:766088-775667:1
so has part: feature:766088-766550:1:exon
so has part: feature:766661-766812:1:exon
so has part: feature:768435-768712:1:exon
so has part: feature:770361-770553:1:exon
so has part: feature:771780-775667:1:exon

position:766088:1
position: 766088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:766088-766550:1:exon

position:766550:1
position: 766550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:766661-766812:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:768435-768712:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:770361-770553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:771780-775667:1:exon

LOC116793351
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793351
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(766613..780177)
location: region:766613-780177:-1
so has part: feature:766613-780177:-1:exon
subclass of: SO_0000011

116793351
type: Gene
SIO_000068: ncbigene

position:766613:-1
position: 766613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780177:-1
position: 780177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:766613-780177:-1:exon

LOC116793351
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116793351
product: uncharacterized LOC116793351, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004359459.1
SIO_010081: LOC116793351
subclass of: SO_0000673
so part of: LOC116793351
location: complement(join(766613..766914,768214..768699,771159..771240,772258..772405,774871..774946,775247..775316,777541..777683,780077..780177))
location: region:766613-780177:-1
so has part: feature:780077-780177:-1:exon
so has part: feature:777541-777683:-1:exon
so has part: feature:775247-775316:-1:exon
so has part: feature:774871-774946:-1:exon
so has part: feature:772258-772405:-1:exon
so has part: feature:771159-771240:-1:exon
so has part: feature:768214-768699:-1:exon
so has part: feature:766613-766914:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:780077-780177:-1:exon

position:780077:-1
position: 780077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:777541-777683:-1:exon

position:777541:-1
position: 777541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777683:-1
position: 777683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:775247-775316:-1:exon

position:775247:-1
position: 775247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775316:-1
position: 775316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:774871-774946:-1:exon

position:774871:-1
position: 774871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:774946:-1
position: 774946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:772258-772405:-1:exon

position:772258:-1
position: 772258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:772405:-1
position: 772405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:771159-771240:-1:exon

position:771159:-1
position: 771159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:771240:-1
position: 771240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:768214-768699:-1:exon

position:768214:-1
position: 768214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:768699:-1
position: 768699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:766613-766914:-1:exon

position:766914:-1
position: 766914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116793351
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116793351
product: uncharacterized LOC116793351, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004359460.1
SIO_010081: LOC116793351
subclass of: SO_0000673
so part of: LOC116793351
location: complement(join(766613..766914,768214..768699,771159..771240,772258..772405,774871..774946,775247..775316,777709..778203))
location: region:766613-778203:-1
so has part: feature:777709-778203:-1:exon
so has part: feature:775247-775316:-1:exon
so has part: feature:774871-774946:-1:exon
so has part: feature:772258-772405:-1:exon
so has part: feature:771159-771240:-1:exon
so has part: feature:768214-768699:-1:exon
so has part: feature:766613-766914:-1:exon

position:778203:-1
position: 778203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:777709-778203:-1:exon

position:777709:-1
position: 777709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:775247-775316:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:774871-774946:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:772258-772405:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:771159-771240:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:768214-768699:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:766613-766914:-1:exon

LOC116793351
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116793351
product: uncharacterized LOC116793351, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004359458.1
SIO_010081: LOC116793351
subclass of: SO_0000673
so part of: LOC116793351
location: complement(join(766613..766914,768214..768699,771159..771240,772258..772405,774871..774946,775247..775584))
location: region:766613-775584:-1
so has part: feature:775247-775584:-1:exon
so has part: feature:774871-774946:-1:exon
so has part: feature:772258-772405:-1:exon
so has part: feature:771159-771240:-1:exon
so has part: feature:768214-768699:-1:exon
so has part: feature:766613-766914:-1:exon

position:775584:-1
position: 775584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:775247-775584:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:774871-774946:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:772258-772405:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:771159-771240:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:768214-768699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:766613-766914:-1:exon

TRADD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: TRADD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor type 1-associated DEATH domain protein
translation: MAGSSAPWIGSAYLFLQSTSKTVVLPSLYESSQEKPGVFRALKLALADSTGSMNGVDMLKVHCSHPQLIVQLKFCRQENCRRFLRSYRDGALQKALQNHLQLSLAMTTVPLEMELKAGSEHLDNMLKDEDRCLECIYREKPDRLRDEELTELEEHLKGLTVHQSINNNVAIKDCAPLKSPSLPHPSQGSSLPPPGTFIFQGQQFDNRTITLDDHQKFAKLVSKKWKQVGRSLQKSCRALRDPVIDNLALEYEREGLYEQAYQLLLRFIQSEGKKATIARLITALEENGLISLAEELLGLHSNEDCS
SIO_010081: TRADD
subclass of: SO_0000673
so part of: TRADD
location: join(766671..766812,768435..768712,770361..770553,771780..772087)
location: region:766671-772087:1
so has part: feature:766671-766812:1:exon
so has part: feature:768435-768712:1:exon
so has part: feature:770361-770553:1:exon
so has part: feature:771780-772087:1:exon

XP_032557038.1
type: Protein
SIO_000068: ncbiprotein

position:766671:1
position: 766671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:772087:1
position: 772087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:766671-766812:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:768435-768712:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:770361-770553:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:771780-772087:1:exon

TRADD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: TRADD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor type 1-associated DEATH domain protein
translation: MAGSSAPWIGSAYLFLQSTSKTVVLPSLYESSQEKPGVFRALKLALADSTGSMNGVDMLKVHCSHPQLIVQLKFCRQENCRRFLRSYRDGALQKALQNHLQLSLAMTTVPLEMELKAGSEHLDNMLKDEDRCLECIYREKPDRLRDEELTELEEHLKGLTVHQSINNNVAIKDCAPLKSPSLPHPSQGSSLPPPGTFIFQGQQFDNRTITLDDHQKFAKLVSKKWKQVGRSLQKSCRALRDPVIDNLALEYEREGLYEQAYQLLLRFIQSEGKKATIARLITALEENGLISLAEELLGLHSNEDCS
SIO_010081: TRADD
subclass of: SO_0000673
so part of: TRADD
location: join(766671..766812,768435..768712,770361..770553,771780..772087)
location: region:766671-772087:1
so has part: feature:766671-766812:1:exon
so has part: feature:768435-768712:1:exon
so has part: feature:770361-770553:1:exon
so has part: feature:771780-772087:1:exon

XP_032557039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:766671-766812:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:768435-768712:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:770361-770553:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:771780-772087:1:exon

TRADD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: TRADD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor type 1-associated DEATH domain protein
translation: MAGSSAPWIGSAYLFLQSTSKTVVLPSLYESSQEKPGVFRALKLALADSTGSMNGVDMLKVHCSHPQLIVQLKFCRQENCRRFLRSYRDGALQKALQNHLQLSLAMTTVPLEMELKAGSEHLDNMLKDEDRCLECIYREKPDRLRDEELTELEEHLKGLTVHQSINNNVAIKDCAPLKSPSLPHPSQGSSLPPPGTFIFQGQQFDNRTITLDDHQKFAKLVSKKWKQVGRSLQKSCRALRDPVIDNLALEYEREGLYEQAYQLLLRFIQSEGKKATIARLITALEENGLISLAEELLGLHSNEDCS
SIO_010081: TRADD
subclass of: SO_0000673
so part of: TRADD
location: join(766671..766812,768435..768712,770361..770553,771780..772087)
location: region:766671-772087:1
so has part: feature:766671-766812:1:exon
so has part: feature:768435-768712:1:exon
so has part: feature:770361-770553:1:exon
so has part: feature:771780-772087:1:exon

XP_032557040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:766671-766812:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:768435-768712:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:770361-770553:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:771780-772087:1:exon

B3GNT9
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: B3GNT9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 778860..790160
location: region:778860-790160:1
so has part: feature:778860-790160:1:exon
subclass of: SO_0000010

116793347
type: Gene
SIO_000068: ncbigene

position:778860:1
position: 778860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790160:1
position: 790160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:778860-790160:1:exon

B3GNT9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: B3GNT9
product: UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 22 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032701138.1
SIO_010081: B3GNT9
subclass of: SO_0000673
so part of: B3GNT9
location: join(778860..779049,785814..785856,786663..790160)
location: region:778860-790160:1
so has part: feature:778860-779049:1:exon
so has part: feature:785814-785856:1:exon
so has part: feature:786663-790160:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:778860-779049:1:exon

position:779049:1
position: 779049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:785814-785856:1:exon

position:785814:1
position: 785814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:785856:1
position: 785856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:786663-790160:1:exon

position:786663:1
position: 786663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

B3GNT9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: B3GNT9
product: UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032701139.1
SIO_010081: B3GNT9
subclass of: SO_0000673
so part of: B3GNT9
location: join(778925..779049,782060..782149,785814..785856,786663..790160)
location: region:778925-790160:1
so has part: feature:778925-779049:1:exon
so has part: feature:782060-782149:1:exon
so has part: feature:785814-785856:1:exon
so has part: feature:786663-790160:1:exon

position:778925:1
position: 778925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:778925-779049:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:782060-782149:1:exon

position:782060:1
position: 782060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782149:1
position: 782149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:785814-785856:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:786663-790160:1:exon

B3GNT9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: B3GNT9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9
translation: MRVRLKGDVICTLLLLVALCSLLYSQLEHLVPAGNKEPTQKKPPATPKISSDPRAPERLIPAEATAPRPQVTPVIRRAEVAKNRAQATTPPPPTDSAFNFQHYLLNKDKRNFNLLINQPRKCRKTPGGPFLLIAIKSVVEDFDRREIVRKTWGREGLVNGEQIQRVFLLGTPKNRTVLATWETLIHQESQTYRDILLWDFMDTFFNLTLKEIHFLSWAAEFCHNVKFIFKGDADVFVNIENIVDFLRRHDPTEDLFVGDIIYNARPIRVRKSKYYIPETMYGLSIYPAYAGGGGFLLSSHTMGRLSRACREVELFPIDDVFLGMCLQRINLKPILHEGFKTFGIVKPSAAPHLQTFDPCFYKDLMVVHSLKVAEIWLMWNLLHSPRLSCTQKKQVKKPFQWKKKAQTTAQTSPLR
SIO_010081: B3GNT9
subclass of: SO_0000673
so part of: B3GNT9
location: 786726..787973
location: region:786726-787973:1
so has part: feature:786726-787973:1:exon

XP_032557029.1
type: Protein
SIO_000068: ncbiprotein

position:786726:1
position: 786726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787973:1
position: 787973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:786726-787973:1:exon

B3GNT9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: B3GNT9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9
translation: MRVRLKGDVICTLLLLVALCSLLYSQLEHLVPAGNKEPTQKKPPATPKISSDPRAPERLIPAEATAPRPQVTPVIRRAEVAKNRAQATTPPPPTDSAFNFQHYLLNKDKRNFNLLINQPRKCRKTPGGPFLLIAIKSVVEDFDRREIVRKTWGREGLVNGEQIQRVFLLGTPKNRTVLATWETLIHQESQTYRDILLWDFMDTFFNLTLKEIHFLSWAAEFCHNVKFIFKGDADVFVNIENIVDFLRRHDPTEDLFVGDIIYNARPIRVRKSKYYIPETMYGLSIYPAYAGGGGFLLSSHTMGRLSRACREVELFPIDDVFLGMCLQRINLKPILHEGFKTFGIVKPSAAPHLQTFDPCFYKDLMVVHSLKVAEIWLMWNLLHSPRLSCTQKKQVKKPFQWKKKAQTTAQTSPLR
SIO_010081: B3GNT9
subclass of: SO_0000673
so part of: B3GNT9
location: 786726..787973
location: region:786726-787973:1
so has part: feature:786726-787973:1:exon

XP_032557030.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:786726-787973:1:exon

C13H16orf70
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: C13H16orf70
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(794610..829440)
location: region:794610-829440:-1
so has part: feature:794610-829440:-1:exon
subclass of: SO_0000010

116793346
type: Gene
SIO_000068: ncbigene

position:794610:-1
position: 794610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829440:-1
position: 829440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:794610-829440:-1:exon

C13H16orf70
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: C13H16orf70
product: chromosome 13 C16orf70 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032701136.1
SIO_010081: C13H16orf70
subclass of: SO_0000673
so part of: C13H16orf70
location: complement(join(794610..794938,795514..795660,797292..797550,797671..797756,798199..798271,799755..799813,801164..801207,803143..803186,803922..804004,804693..804776,805365..805498,806300..806412,808013..808110,810596..810690,815124..815203,815470..815513,820130..820213,823806..823888,829013..829134,829395..829440))
location: region:794610-829440:-1
so has part: feature:829395-829440:-1:exon
so has part: feature:829013-829134:-1:exon
so has part: feature:823806-823888:-1:exon
so has part: feature:820130-820213:-1:exon
so has part: feature:815470-815513:-1:exon
so has part: feature:815124-815203:-1:exon
so has part: feature:810596-810690:-1:exon
so has part: feature:808013-808110:-1:exon
so has part: feature:806300-806412:-1:exon
so has part: feature:805365-805498:-1:exon
so has part: feature:804693-804776:-1:exon
so has part: feature:803922-804004:-1:exon
so has part: feature:803143-803186:-1:exon
so has part: feature:801164-801207:-1:exon
so has part: feature:799755-799813:-1:exon
so has part: feature:798199-798271:-1:exon
so has part: feature:797671-797756:-1:exon
so has part: feature:797292-797550:-1:exon
so has part: feature:795514-795660:-1:exon
so has part: feature:794610-794938:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:829395-829440:-1:exon

position:829395:-1
position: 829395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:829013-829134:-1:exon

position:829013:-1
position: 829013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829134:-1
position: 829134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:823806-823888:-1:exon

position:823806:-1
position: 823806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:823888:-1
position: 823888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:820130-820213:-1:exon

position:820130:-1
position: 820130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820213:-1
position: 820213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:815470-815513:-1:exon

position:815470:-1
position: 815470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:815513:-1
position: 815513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:815124-815203:-1:exon

position:815124:-1
position: 815124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:815203:-1
position: 815203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:810596-810690:-1:exon

position:810596:-1
position: 810596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:810690:-1
position: 810690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:808013-808110:-1:exon

position:808013:-1
position: 808013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808110:-1
position: 808110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:806300-806412:-1:exon

position:806300:-1
position: 806300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806412:-1
position: 806412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:805365-805498:-1:exon

position:805365:-1
position: 805365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:805498:-1
position: 805498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:804693-804776:-1:exon

position:804693:-1
position: 804693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:804776:-1
position: 804776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:803922-804004:-1:exon

position:803922:-1
position: 803922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:804004:-1
position: 804004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:803143-803186:-1:exon

position:803143:-1
position: 803143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:803186:-1
position: 803186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:801164-801207:-1:exon

position:801164:-1
position: 801164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:801207:-1
position: 801207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:799755-799813:-1:exon

position:799755:-1
position: 799755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:799813:-1
position: 799813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:798199-798271:-1:exon

position:798199:-1
position: 798199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798271:-1
position: 798271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:797671-797756:-1:exon

position:797671:-1
position: 797671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797756:-1
position: 797756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:797292-797550:-1:exon

position:797292:-1
position: 797292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797550:-1
position: 797550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:795514-795660:-1:exon

position:795514:-1
position: 795514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:795660:-1
position: 795660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:794610-794938:-1:exon

position:794938:-1
position: 794938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C13H16orf70
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: C13H16orf70
product: chromosome 13 C16orf70 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032701135.1
SIO_010081: C13H16orf70
subclass of: SO_0000673
so part of: C13H16orf70
location: complement(join(795770..795965,797292..797550,797671..797756,798199..798271,799755..799813,801164..801207,803143..803186,803922..804004,804693..804776,805365..805498,806300..806412,808013..808110,810596..810690,815124..815203,815470..815513,820130..820213,823806..823888,829013..829134,829395..829440))
location: region:795770-829440:-1
so has part: feature:829395-829440:-1:exon
so has part: feature:829013-829134:-1:exon
so has part: feature:823806-823888:-1:exon
so has part: feature:820130-820213:-1:exon
so has part: feature:815470-815513:-1:exon
so has part: feature:815124-815203:-1:exon
so has part: feature:810596-810690:-1:exon
so has part: feature:808013-808110:-1:exon
so has part: feature:806300-806412:-1:exon
so has part: feature:805365-805498:-1:exon
so has part: feature:804693-804776:-1:exon
so has part: feature:803922-804004:-1:exon
so has part: feature:803143-803186:-1:exon
so has part: feature:801164-801207:-1:exon
so has part: feature:799755-799813:-1:exon
so has part: feature:798199-798271:-1:exon
so has part: feature:797671-797756:-1:exon
so has part: feature:797292-797550:-1:exon
so has part: feature:795770-795965:-1:exon

position:795770:-1
position: 795770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:829395-829440:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:829013-829134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:823806-823888:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:820130-820213:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:815470-815513:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:815124-815203:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:810596-810690:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:808013-808110:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:806300-806412:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:805365-805498:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:804693-804776:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:803922-804004:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:803143-803186:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:801164-801207:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:799755-799813:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:798199-798271:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:797671-797756:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:797292-797550:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:795770-795965:-1:exon

position:795965:-1
position: 795965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C13H16orf70
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: C13H16orf70
product: chromosome 13 C16orf70 homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032701137.1
SIO_010081: C13H16orf70
subclass of: SO_0000673
so part of: C13H16orf70
location: complement(join(795770..795965,797292..797756,798199..798271,799755..799813,801164..801207,803143..803186,803922..804004,804693..804776,805365..805498,806300..806412,808013..808110,810596..810690,815124..815203,815470..815513,820130..820213,823806..823888,829013..829134,829395..829440))
location: region:795770-829440:-1
so has part: feature:829395-829440:-1:exon
so has part: feature:829013-829134:-1:exon
so has part: feature:823806-823888:-1:exon
so has part: feature:820130-820213:-1:exon
so has part: feature:815470-815513:-1:exon
so has part: feature:815124-815203:-1:exon
so has part: feature:810596-810690:-1:exon
so has part: feature:808013-808110:-1:exon
so has part: feature:806300-806412:-1:exon
so has part: feature:805365-805498:-1:exon
so has part: feature:804693-804776:-1:exon
so has part: feature:803922-804004:-1:exon
so has part: feature:803143-803186:-1:exon
so has part: feature:801164-801207:-1:exon
so has part: feature:799755-799813:-1:exon
so has part: feature:798199-798271:-1:exon
so has part: feature:797292-797756:-1:exon
so has part: feature:795770-795965:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:829395-829440:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:829013-829134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:823806-823888:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:820130-820213:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:815470-815513:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:815124-815203:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:810596-810690:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:808013-808110:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:806300-806412:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:805365-805498:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:804693-804776:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:803922-804004:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:803143-803186:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:801164-801207:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:799755-799813:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:798199-798271:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:797292-797756:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:795770-795965:-1:exon

C13H16orf70
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: C13H16orf70
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0183 protein C16orf70 homolog isoform X1
translation: MLDLEVVPERSLGNEQWEFTLGMPLAQAVAILQKHCRIIKNVQVLYSEQSPLSHDLILNLTQDGIKLLFDAFNQRLKVIEVYDLTKVKLKYCGVHFNSQAIAPTIEQIDQSFGATHPGVYNSAEQLFHLNFRGLSFSFQLDSWTETPKYEPNFAHGLASLQIPHGATVKRMYIYSGNSLQDTKAPLMPLSCFLGNVYAENVDVLRDGTGPSGLRLRLLTAGCGPGVLADAKMRVFERCVYFGDSCQDVLSTLGSPHKVFYKSEDKMKIHSPSPHKQVPSKCNDYFFNYFTLGVDILFDANTHKVKKFVLHTNYPGHYNFNIYHRCEFKIPLVIKRDSADSQTETCTTYSKWDSIQDLLGHPVEKPVVLHRSSSPNNTNPFGSTFCFGLQRMIFEVMQNNHIASVTLYGPTRPSSQLRTSDLPHLPTQERCGEGILSTLHHGAWNC
SIO_010081: C13H16orf70
subclass of: SO_0000673
so part of: C13H16orf70
location: complement(join(797481..797550,797671..797756,798199..798271,799755..799813,801164..801207,803143..803186,803922..804004,804693..804776,805365..805498,806300..806412,808013..808110,810596..810690,815124..815203,815470..815513,820130..820213,823806..823888,829013..829076))
location: region:797481-829076:-1
so has part: feature:829013-829076:-1:exon
so has part: feature:823806-823888:-1:exon
so has part: feature:820130-820213:-1:exon
so has part: feature:815470-815513:-1:exon
so has part: feature:815124-815203:-1:exon
so has part: feature:810596-810690:-1:exon
so has part: feature:808013-808110:-1:exon
so has part: feature:806300-806412:-1:exon
so has part: feature:805365-805498:-1:exon
so has part: feature:804693-804776:-1:exon
so has part: feature:803922-804004:-1:exon
so has part: feature:803143-803186:-1:exon
so has part: feature:801164-801207:-1:exon
so has part: feature:799755-799813:-1:exon
so has part: feature:798199-798271:-1:exon
so has part: feature:797671-797756:-1:exon
so has part: feature:797481-797550:-1:exon

XP_032557026.1
type: Protein
SIO_000068: ncbiprotein

position:797481:-1
position: 797481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829076:-1
position: 829076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:829013-829076:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:823806-823888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:820130-820213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:815470-815513:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:815124-815203:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:810596-810690:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:808013-808110:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:806300-806412:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:805365-805498:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:804693-804776:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:803922-804004:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:803143-803186:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:801164-801207:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:799755-799813:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:798199-798271:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:797671-797756:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:797481-797550:-1:exon

C13H16orf70
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: C13H16orf70
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0183 protein C16orf70 homolog isoform X1
translation: MLDLEVVPERSLGNEQWEFTLGMPLAQAVAILQKHCRIIKNVQVLYSEQSPLSHDLILNLTQDGIKLLFDAFNQRLKVIEVYDLTKVKLKYCGVHFNSQAIAPTIEQIDQSFGATHPGVYNSAEQLFHLNFRGLSFSFQLDSWTETPKYEPNFAHGLASLQIPHGATVKRMYIYSGNSLQDTKAPLMPLSCFLGNVYAENVDVLRDGTGPSGLRLRLLTAGCGPGVLADAKMRVFERCVYFGDSCQDVLSTLGSPHKVFYKSEDKMKIHSPSPHKQVPSKCNDYFFNYFTLGVDILFDANTHKVKKFVLHTNYPGHYNFNIYHRCEFKIPLVIKRDSADSQTETCTTYSKWDSIQDLLGHPVEKPVVLHRSSSPNNTNPFGSTFCFGLQRMIFEVMQNNHIASVTLYGPTRPSSQLRTSDLPHLPTQERCGEGILSTLHHGAWNC
SIO_010081: C13H16orf70
subclass of: SO_0000673
so part of: C13H16orf70
location: complement(join(797481..797550,797671..797756,798199..798271,799755..799813,801164..801207,803143..803186,803922..804004,804693..804776,805365..805498,806300..806412,808013..808110,810596..810690,815124..815203,815470..815513,820130..820213,823806..823888,829013..829076))
location: region:797481-829076:-1
so has part: feature:829013-829076:-1:exon
so has part: feature:823806-823888:-1:exon
so has part: feature:820130-820213:-1:exon
so has part: feature:815470-815513:-1:exon
so has part: feature:815124-815203:-1:exon
so has part: feature:810596-810690:-1:exon
so has part: feature:808013-808110:-1:exon
so has part: feature:806300-806412:-1:exon
so has part: feature:805365-805498:-1:exon
so has part: feature:804693-804776:-1:exon
so has part: feature:803922-804004:-1:exon
so has part: feature:803143-803186:-1:exon
so has part: feature:801164-801207:-1:exon
so has part: feature:799755-799813:-1:exon
so has part: feature:798199-798271:-1:exon
so has part: feature:797671-797756:-1:exon
so has part: feature:797481-797550:-1:exon

XP_032557027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:829013-829076:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:823806-823888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:820130-820213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:815470-815513:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:815124-815203:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:810596-810690:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:808013-808110:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:806300-806412:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:805365-805498:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:804693-804776:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:803922-804004:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:803143-803186:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:801164-801207:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:799755-799813:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:798199-798271:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:797671-797756:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:797481-797550:-1:exon

C13H16orf70
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: C13H16orf70
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0183 protein C16orf70 homolog isoform X2
translation: MLDLEVVPERSLGNEQWEFTLGMPLAQAVAILQKHCRIIKNVQVLYSEQSPLSHDLILNLTQDGIKLLFDAFNQRLKVIEVYDLTKVKLKYCGVHFNSQAIAPTIEQIDQSFGATHPGVYNSAEQLFHLNFRGLSFSFQLDSWTETPKYEPNFAHGLASLQIPHGATVKRMYIYSGNSLQDTKAPLMPLSCFLGNVYAENVDVLRDGTGPSGLRLRLLTAGCGPGVLADAKMRVFERCVYFGDSCQDVLSTLGSPHKVFYKSEDKMKIHSPSPHKQVPSKCNDYFFNYFTLGVDILFDANTHKVKKFVLHTNYPGHYNFNIYHRCEFKIPLVIKRDSADSQTETCTTYSKWDSIQDLLGHPVEKPVVLHRSSSPNNTNPFGSTFCFGLQRMIFEVMQNNHIASVTLYGPTRPSSQLRTSDLPQ
SIO_010081: C13H16orf70
subclass of: SO_0000673
so part of: C13H16orf70
location: complement(join(797667..797756,798199..798271,799755..799813,801164..801207,803143..803186,803922..804004,804693..804776,805365..805498,806300..806412,808013..808110,810596..810690,815124..815203,815470..815513,820130..820213,823806..823888,829013..829076))
location: region:797667-829076:-1
so has part: feature:829013-829076:-1:exon
so has part: feature:823806-823888:-1:exon
so has part: feature:820130-820213:-1:exon
so has part: feature:815470-815513:-1:exon
so has part: feature:815124-815203:-1:exon
so has part: feature:810596-810690:-1:exon
so has part: feature:808013-808110:-1:exon
so has part: feature:806300-806412:-1:exon
so has part: feature:805365-805498:-1:exon
so has part: feature:804693-804776:-1:exon
so has part: feature:803922-804004:-1:exon
so has part: feature:803143-803186:-1:exon
so has part: feature:801164-801207:-1:exon
so has part: feature:799755-799813:-1:exon
so has part: feature:798199-798271:-1:exon
so has part: feature:797667-797756:-1:exon

XP_032557028.1
type: Protein
SIO_000068: ncbiprotein

position:797667:-1
position: 797667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:829013-829076:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:823806-823888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:820130-820213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:815470-815513:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:815124-815203:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:810596-810690:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:808013-808110:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:806300-806412:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:805365-805498:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:804693-804776:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:803922-804004:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:803143-803186:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:801164-801207:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:799755-799813:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:798199-798271:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:797667-797756:-1:exon

CBFB
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: CBFB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(838826..878560)
location: region:838826-878560:-1
so has part: feature:838826-878560:-1:exon
subclass of: SO_0000010

116793461
type: Gene
SIO_000068: ncbigene

position:838826:-1
position: 838826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:878560:-1
position: 878560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:838826-878560:-1:exon

CBFB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: CBFB
product: core-binding factor subunit beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 6 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_032701337.1
SIO_010081: CBFB
subclass of: SO_0000673
so part of: CBFB
location: complement(join(838826..841096,851924..852050,857058..857174,873672..873788,878173..878259,878447..878560))
location: region:838826-878560:-1
so has part: feature:878447-878560:-1:exon
so has part: feature:878173-878259:-1:exon
so has part: feature:873672-873788:-1:exon
so has part: feature:857058-857174:-1:exon
so has part: feature:851924-852050:-1:exon
so has part: feature:838826-841096:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:878447-878560:-1:exon

position:878447:-1
position: 878447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:878173-878259:-1:exon

position:878173:-1
position: 878173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:878259:-1
position: 878259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:873672-873788:-1:exon

position:873672:-1
position: 873672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:873788:-1
position: 873788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:857058-857174:-1:exon

position:857058:-1
position: 857058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:857174:-1
position: 857174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:851924-852050:-1:exon

position:851924:-1
position: 851924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:852050:-1
position: 852050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:838826-841096:-1:exon

position:841096:-1
position: 841096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CBFB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: CBFB
product: core-binding factor subunit beta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 6 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_032701336.1
SIO_010081: CBFB
subclass of: SO_0000673
so part of: CBFB
location: complement(join(838826..841096,851955..852050,857058..857174,873672..873788,878173..878259,878447..878555))
location: region:838826-878555:-1
so has part: feature:878447-878555:-1:exon
so has part: feature:878173-878259:-1:exon
so has part: feature:873672-873788:-1:exon
so has part: feature:857058-857174:-1:exon
so has part: feature:851955-852050:-1:exon
so has part: feature:838826-841096:-1:exon

position:878555:-1
position: 878555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:878447-878555:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:878173-878259:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:873672-873788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:857058-857174:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:851955-852050:-1:exon

position:851955:-1
position: 851955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:838826-841096:-1:exon

CBFB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: CBFB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: core-binding factor subunit beta isoform X1
translation: MPRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQARFQNACRDGRSEIAFVATGTNLSLQFFPASWQGEQRQTPTREYVDFEREGGKVYLKAPMILNGVCVIWKGWIDLQRLDGMGCLEFDEERAQQEDALAQQAFEEARRRTREFEDRDRSHREEMEARRQQDPSPGSTLGSGDDLKLR
SIO_010081: CBFB
subclass of: SO_0000673
so part of: CBFB
location: complement(join(841028..841096,851955..852050,857058..857174,873672..873788,878173..878259,878447..878524))
location: region:841028-878524:-1
so has part: feature:878447-878524:-1:exon
so has part: feature:878173-878259:-1:exon
so has part: feature:873672-873788:-1:exon
so has part: feature:857058-857174:-1:exon
so has part: feature:851955-852050:-1:exon
so has part: feature:841028-841096:-1:exon

XP_032557227.1
type: Protein
SIO_000068: ncbiprotein

position:841028:-1
position: 841028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:878524:-1
position: 878524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:878447-878524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:878173-878259:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:873672-873788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:857058-857174:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:851955-852050:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:841028-841096:-1:exon

CBFB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: CBFB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: core-binding factor subunit beta isoform X2
translation: MPRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQARFQNACRDGRSEIAFVATGTNLSLQFFPASWQGEQRQTPTREYVDFEREGGKVYLKAPMILNGVCVIWKGWIDLQRLDGMGCLEFDEERAQQEDALAQQAFEEARRRTREFEDRDRSHREEMEVRVSQLLSVTGKKTARP
SIO_010081: CBFB
subclass of: SO_0000673
so part of: CBFB
location: complement(join(841074..841096,851924..852050,857058..857174,873672..873788,878173..878259,878447..878524))
location: region:841074-878524:-1
so has part: feature:878447-878524:-1:exon
so has part: feature:878173-878259:-1:exon
so has part: feature:873672-873788:-1:exon
so has part: feature:857058-857174:-1:exon
so has part: feature:851924-852050:-1:exon
so has part: feature:841074-841096:-1:exon

XP_032557228.1
type: Protein
SIO_000068: ncbiprotein

position:841074:-1
position: 841074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:878447-878524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:878173-878259:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:873672-873788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:857058-857174:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:851924-852050:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:841074-841096:-1:exon

LOC116793506
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793506
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 881909..882563
location: region:881909-882563:1
so has part: feature:881909-882563:1:exon
subclass of: SO_0000011

116793506
type: Gene
SIO_000068: ncbigene

position:881909:1
position: 881909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882563:1
position: 882563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:881909-882563:1:exon

LOC116793506
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 296741
nc RNA class: lncRNA
gene: LOC116793506
product: uncharacterized LOC116793506
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004359508.1
SIO_010081: LOC116793506
subclass of: SO_0000673
so part of: LOC116793506
location: join(881909..882109,882367..882563)
location: region:881909-882563:1
so has part: feature:881909-882109:1:exon
so has part: feature:882367-882563:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:881909-882109:1:exon

position:882109:1
position: 882109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:882367-882563:1:exon

position:882367:1
position: 882367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GNAO1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: GNAO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 967705..1107427
location: region:967705-1107427:1
so has part: feature:967705-1107427:1:exon
subclass of: SO_0000010

116793245
type: Gene
SIO_000068: ncbigene

position:967705:1
position: 967705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1107427:1
position: 1107427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:967705-1107427:1:exon

GNAO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: GNAO1
product: G protein subunit alpha o1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 9 long SRA reads, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032700937.1
SIO_010081: GNAO1
subclass of: SO_0000673
so part of: GNAO1
location: join(967705..968307,968401..968443,1015578..1015719,1058763..1058923,1080904..1081032,1081728..1081857,1103505..1103658,1105392..1107427)
location: region:967705-1107427:1
so has part: feature:967705-968307:1:exon
so has part: feature:968401-968443:1:exon
so has part: feature:1015578-1015719:1:exon
so has part: feature:1058763-1058923:1:exon
so has part: feature:1080904-1081032:1:exon
so has part: feature:1081728-1081857:1:exon
so has part: feature:1103505-1103658:1:exon
so has part: feature:1105392-1107427:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:967705-968307:1:exon

position:968307:1
position: 968307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:968401-968443:1:exon

position:968401:1
position: 968401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:968443:1
position: 968443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1015578-1015719:1:exon

position:1015578:1
position: 1015578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1015719:1
position: 1015719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1058763-1058923:1:exon

position:1058763:1
position: 1058763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1058923:1
position: 1058923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1080904-1081032:1:exon

position:1080904:1
position: 1080904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1081032:1
position: 1081032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1081728-1081857:1:exon

position:1081728:1
position: 1081728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1081857:1
position: 1081857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1103505-1103658:1:exon

position:1103505:1
position: 1103505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1103658:1
position: 1103658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1105392-1107427:1:exon

position:1105392:1
position: 1105392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GNAO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: GNAO1
product: G protein subunit alpha o1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 long SRA reads, 56 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032700938.1
SIO_010081: GNAO1
subclass of: SO_0000673
so part of: GNAO1
location: join(967768..968307,968401..968443,1015578..1015719,1058763..1058923,1080904..1081032,1081728..1081857,1089982..1090135,1094159..1100688)
location: region:967768-1100688:1
so has part: feature:967768-968307:1:exon
so has part: feature:968401-968443:1:exon
so has part: feature:1015578-1015719:1:exon
so has part: feature:1058763-1058923:1:exon
so has part: feature:1080904-1081032:1:exon
so has part: feature:1081728-1081857:1:exon
so has part: feature:1089982-1090135:1:exon
so has part: feature:1094159-1100688:1:exon

position:967768:1
position: 967768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1100688:1
position: 1100688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:967768-968307:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:968401-968443:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1015578-1015719:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1058763-1058923:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1080904-1081032:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1081728-1081857:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1089982-1090135:1:exon

position:1089982:1
position: 1089982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1090135:1
position: 1090135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1094159-1100688:1:exon

position:1094159:1
position: 1094159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GNAO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: GNAO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein G(o) subunit alpha isoform X1
translation: MGCTLSAEERAALERSKAIEKNLKEDGISAAKDVKLLLLGAGESGKSTIVKQMKIIHEDGFSGEDVKQYKPVVYSNTIQSLAAIVRAMDTLGIEYGDKERRADAKMVCDVVSRMEDTEPFSPELLSAMMRLWADSGIQECFNRSREYQLNDSAQYYLDSLDRIGAADYQPTEQDILRTRVKTTGIVETHFTFKNLHFRLFDVGGQRSERKKWIHCFEDVTAIIFCVALSGYDQVLHEDETTNRMHESLMLFDSICNNKFFIDTSIILFLNKKDLFAEKIKKSPLTICFPEYTGPNTYEDAAAYIQAQFESKNRSPNKEIYCHMTCATDTNNIQVVFDAVTDIIIANNLRGCGLY
SIO_010081: GNAO1
subclass of: SO_0000673
so part of: GNAO1
location: join(968190..968307,968401..968443,1015578..1015719,1058763..1058923,1080904..1081032,1081728..1081857,1103505..1103658,1105392..1105579)
location: region:968190-1105579:1
so has part: feature:968190-968307:1:exon
so has part: feature:968401-968443:1:exon
so has part: feature:1015578-1015719:1:exon
so has part: feature:1058763-1058923:1:exon
so has part: feature:1080904-1081032:1:exon
so has part: feature:1081728-1081857:1:exon
so has part: feature:1103505-1103658:1:exon
so has part: feature:1105392-1105579:1:exon

XP_032556828.1
type: Protein
SIO_000068: ncbiprotein

position:968190:1
position: 968190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1105579:1
position: 1105579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:968190-968307:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:968401-968443:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1015578-1015719:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1058763-1058923:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1080904-1081032:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1081728-1081857:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1103505-1103658:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1105392-1105579:1:exon

GNAO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: GNAO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein G(o) subunit alpha isoform X2
translation: MGCTLSAEERAALERSKAIEKNLKEDGISAAKDVKLLLLGAGESGKSTIVKQMKIIHEDGFSGEDVKQYKPVVYSNTIQSLAAIVRAMDTLGIEYGDKERRADAKMVCDVVSRMEDTEPFSPELLSAMMRLWADSGIQECFNRSREYQLNDSAQYYLDSLDRIGAADYQPTEQDILRTRVKTTGIVETHFTFKNLHFRLFDVGGQRSERKKWIHCFEDVTAIIFCVALSGYDQVLHEDETTNRMHESLKLFDSICNNKWFTDTSIILFLNKKDIFEEKIKKSPLAICFPEYTGPNAFTEAVAYIQTQYESKNKSPNKEIYTHITCATDTNNIQFVFDAVTDVIIANNLRGCGLY
SIO_010081: GNAO1
subclass of: SO_0000673
so part of: GNAO1
location: join(968190..968307,968401..968443,1015578..1015719,1058763..1058923,1080904..1081032,1081728..1081857,1089982..1090135,1094159..1094346)
location: region:968190-1094346:1
so has part: feature:968190-968307:1:exon
so has part: feature:968401-968443:1:exon
so has part: feature:1015578-1015719:1:exon
so has part: feature:1058763-1058923:1:exon
so has part: feature:1080904-1081032:1:exon
so has part: feature:1081728-1081857:1:exon
so has part: feature:1089982-1090135:1:exon
so has part: feature:1094159-1094346:1:exon

XP_032556829.1
type: Protein
SIO_000068: ncbiprotein

position:1094346:1
position: 1094346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:968190-968307:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:968401-968443:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1015578-1015719:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1058763-1058923:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1080904-1081032:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1081728-1081857:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1089982-1090135:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1094159-1094346:1:exon

AMFR
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: AMFR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1109459..1137022)
location: region:1109459-1137022:-1
so has part: feature:1109459-1137022:-1:exon
subclass of: SO_0000010

116793352
type: Gene
SIO_000068: ncbigene

position:1109459:-1
position: 1109459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1137022:-1
position: 1137022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1109459-1137022:-1:exon

AMFR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: AMFR
product: autocrine motility factor receptor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 4 long SRA reads, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_032701150.1
SIO_010081: AMFR
subclass of: SO_0000673
so part of: AMFR
location: complement(join(1109459..1110976,1112412..1112596,1116038..1116121,1116774..1116908,1118842..1118945,1120532..1120722,1123567..1123677,1125347..1125480,1125993..1126125,1127025..1127065,1131371..1131523,1133279..1133443,1135269..1135361,1136784..1137022))
location: region:1109459-1137022:-1
so has part: feature:1136784-1137022:-1:exon
so has part: feature:1135269-1135361:-1:exon
so has part: feature:1133279-1133443:-1:exon
so has part: feature:1131371-1131523:-1:exon
so has part: feature:1127025-1127065:-1:exon
so has part: feature:1125993-1126125:-1:exon
so has part: feature:1125347-1125480:-1:exon
so has part: feature:1123567-1123677:-1:exon
so has part: feature:1120532-1120722:-1:exon
so has part: feature:1118842-1118945:-1:exon
so has part: feature:1116774-1116908:-1:exon
so has part: feature:1116038-1116121:-1:exon
so has part: feature:1112412-1112596:-1:exon
so has part: feature:1109459-1110976:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1136784-1137022:-1:exon

position:1136784:-1
position: 1136784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1135269-1135361:-1:exon

position:1135269:-1
position: 1135269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1135361:-1
position: 1135361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1133279-1133443:-1:exon

position:1133279:-1
position: 1133279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1133443:-1
position: 1133443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1131371-1131523:-1:exon

position:1131371:-1
position: 1131371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1131523:-1
position: 1131523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1127025-1127065:-1:exon

position:1127025:-1
position: 1127025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1127065:-1
position: 1127065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1125993-1126125:-1:exon

position:1125993:-1
position: 1125993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1126125:-1
position: 1126125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1125347-1125480:-1:exon

position:1125347:-1
position: 1125347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1125480:-1
position: 1125480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1123567-1123677:-1:exon

position:1123567:-1
position: 1123567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1123677:-1
position: 1123677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1120532-1120722:-1:exon

position:1120532:-1
position: 1120532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1120722:-1
position: 1120722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1118842-1118945:-1:exon

position:1118842:-1
position: 1118842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1118945:-1
position: 1118945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1116774-1116908:-1:exon

position:1116774:-1
position: 1116774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1116908:-1
position: 1116908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1116038-1116121:-1:exon

position:1116038:-1
position: 1116038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1116121:-1
position: 1116121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1112412-1112596:-1:exon

position:1112412:-1
position: 1112412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1112596:-1
position: 1112596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1109459-1110976:-1:exon

position:1110976:-1
position: 1110976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AMFR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: AMFR
product: autocrine motility factor receptor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_032701152.1
SIO_010081: AMFR
subclass of: SO_0000673
so part of: AMFR
location: complement(join(1109459..1110976,1112412..1112596,1116038..1116121,1116774..1116908,1118842..1118945,1120532..1120722,1123567..1123677,1125347..1125480,1125993..1126125,1127025..1127065,1131371..1131523,1133279..1133443,1135317..1135361,1136784..1137020))
location: region:1109459-1137020:-1
so has part: feature:1136784-1137020:-1:exon
so has part: feature:1135317-1135361:-1:exon
so has part: feature:1133279-1133443:-1:exon
so has part: feature:1131371-1131523:-1:exon
so has part: feature:1127025-1127065:-1:exon
so has part: feature:1125993-1126125:-1:exon
so has part: feature:1125347-1125480:-1:exon
so has part: feature:1123567-1123677:-1:exon
so has part: feature:1120532-1120722:-1:exon
so has part: feature:1118842-1118945:-1:exon
so has part: feature:1116774-1116908:-1:exon
so has part: feature:1116038-1116121:-1:exon
so has part: feature:1112412-1112596:-1:exon
so has part: feature:1109459-1110976:-1:exon

position:1137020:-1
position: 1137020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1136784-1137020:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1135317-1135361:-1:exon

position:1135317:-1
position: 1135317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1133279-1133443:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1131371-1131523:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1127025-1127065:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1125993-1126125:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1125347-1125480:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1123567-1123677:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1120532-1120722:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1118842-1118945:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1116774-1116908:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1116038-1116121:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1112412-1112596:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1109459-1110976:-1:exon

AMFR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: AMFR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase AMFR isoform X2
translation: MPLLFLERFPWPSLRTYTALSALALLGAGLSAYRALSQAPAGPAAAEPAEPPRCAGPRALDVAYYLLSDSLCVWVLVNTACCFLMLVAKHLKDKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFSGLVFLHLMVQLCKDRFEYLSFSPTTPMSSHIRVLALLIAMLLSCCGLAVVCGVVGYTHGMHTLAFMAAESLLVTVRTAHVILRYVVHLWDLNHEGTWEGKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRRHKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQSARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNITDSHHVREEHQRENLDENLVPVAAAEGRPRLNQHNHFFHFDGSRIASWLPSFSVEVMHTTNILGIAQASNSQLNVMAHQIQEMFPQVPYHLVLQDLQLTRSVEITTDNILEGRIQVPFPTQRADSIRPALNNSVERHSTDQEDAGTVTQTERVPLELNSRLEEMVEFSEMEAEPSEAEDFEARGSRFSKSADERQRMLVQRKEDLLQQARKRYLNKTSEEELSPEKPCPEGAADAVTLRRRTLAAAAERRLQMQQNS
SIO_010081: AMFR
subclass of: SO_0000673
so part of: AMFR
location: complement(join(1110835..1110976,1112412..1112596,1116038..1116121,1116774..1116908,1118842..1118945,1120532..1120722,1123567..1123677,1125347..1125480,1125993..1126125,1127025..1127065,1131371..1131523,1133279..1133443,1135317..1135361,1136784..1137005))
location: region:1110835-1137005:-1
so has part: feature:1136784-1137005:-1:exon
so has part: feature:1135317-1135361:-1:exon
so has part: feature:1133279-1133443:-1:exon
so has part: feature:1131371-1131523:-1:exon
so has part: feature:1127025-1127065:-1:exon
so has part: feature:1125993-1126125:-1:exon
so has part: feature:1125347-1125480:-1:exon
so has part: feature:1123567-1123677:-1:exon
so has part: feature:1120532-1120722:-1:exon
so has part: feature:1118842-1118945:-1:exon
so has part: feature:1116774-1116908:-1:exon
so has part: feature:1116038-1116121:-1:exon
so has part: feature:1112412-1112596:-1:exon
so has part: feature:1110835-1110976:-1:exon

XP_032557043.1
type: Protein
SIO_000068: ncbiprotein

position:1110835:-1
position: 1110835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1137005:-1
position: 1137005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1136784-1137005:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1135317-1135361:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1133279-1133443:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1131371-1131523:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1127025-1127065:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1125993-1126125:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1125347-1125480:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1123567-1123677:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1120532-1120722:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1118842-1118945:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1116774-1116908:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1116038-1116121:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1112412-1112596:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1110835-1110976:-1:exon

AMFR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: AMFR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase AMFR isoform X1
translation: MPLLFLERFPWPSLRTYTALSALALLGAGLSAYRALSQAPAGPAAAEPAEPPRCAGPRALDVAYYLLSDSLCVWVLVNTACCFLMLVAKVIQCMVFGPLRVSERQHLKDKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFSGLVFLHLMVQLCKDRFEYLSFSPTTPMSSHIRVLALLIAMLLSCCGLAVVCGVVGYTHGMHTLAFMAAESLLVTVRTAHVILRYVVHLWDLNHEGTWEGKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRRHKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQSARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNITDSHHVREEHQRENLDENLVPVAAAEGRPRLNQHNHFFHFDGSRIASWLPSFSVEVMHTTNILGIAQASNSQLNVMAHQIQEMFPQVPYHLVLQDLQLTRSVEITTDNILEGRIQVPFPTQRADSIRPALNNSVERHSTDQEDAGTVTQTERVPLELNSRLEEMVEFSEMEAEPSEAEDFEARGSRFSKSADERQRMLVQRKEDLLQQARKRYLNKTSEEELSPEKPCPEGAADAVTLRRRTLAAAAERRLQMQQNS
SIO_010081: AMFR
subclass of: SO_0000673
so part of: AMFR
location: complement(join(1110835..1110976,1112412..1112596,1116038..1116121,1116774..1116908,1118842..1118945,1120532..1120722,1123567..1123677,1125347..1125480,1125993..1126125,1127025..1127065,1131371..1131523,1133279..1133443,1135269..1135361,1136784..1137005))
location: region:1110835-1137005:-1
so has part: feature:1136784-1137005:-1:exon
so has part: feature:1135269-1135361:-1:exon
so has part: feature:1133279-1133443:-1:exon
so has part: feature:1131371-1131523:-1:exon
so has part: feature:1127025-1127065:-1:exon
so has part: feature:1125993-1126125:-1:exon
so has part: feature:1125347-1125480:-1:exon
so has part: feature:1123567-1123677:-1:exon
so has part: feature:1120532-1120722:-1:exon
so has part: feature:1118842-1118945:-1:exon
so has part: feature:1116774-1116908:-1:exon
so has part: feature:1116038-1116121:-1:exon
so has part: feature:1112412-1112596:-1:exon
so has part: feature:1110835-1110976:-1:exon

XP_032557041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1136784-1137005:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1135269-1135361:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1133279-1133443:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1131371-1131523:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1127025-1127065:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1125993-1126125:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1125347-1125480:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1123567-1123677:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1120532-1120722:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1118842-1118945:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1116774-1116908:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1116038-1116121:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1112412-1112596:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1110835-1110976:-1:exon

OGFOD1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: OGFOD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1145084..1154248
location: region:1145084-1154248:1
so has part: feature:1145084-1154248:1:exon
subclass of: SO_0000010

116793244
type: Gene
SIO_000068: ncbigene

position:1145084:1
position: 1145084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1154248:1
position: 1154248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1145084-1154248:1:exon

OGFOD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: OGFOD1
product: 2-oxoglutarate and iron dependent oxygenase domain containing 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 long SRA reads, 10 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032700936.1
SIO_010081: OGFOD1
subclass of: SO_0000673
so part of: OGFOD1
location: join(1145084..1145573,1145774..1145919,1146002..1146048,1146182..1146282,1147133..1147249,1148089..1148180,1149264..1149389,1149730..1149843,1150514..1150593,1150726..1151021,1152285..1152407,1153137..1153195,1153719..1154248)
location: region:1145084-1154248:1
so has part: feature:1145084-1145573:1:exon
so has part: feature:1145774-1145919:1:exon
so has part: feature:1146002-1146048:1:exon
so has part: feature:1146182-1146282:1:exon
so has part: feature:1147133-1147249:1:exon
so has part: feature:1148089-1148180:1:exon
so has part: feature:1149264-1149389:1:exon
so has part: feature:1149730-1149843:1:exon
so has part: feature:1150514-1150593:1:exon
so has part: feature:1150726-1151021:1:exon
so has part: feature:1152285-1152407:1:exon
so has part: feature:1153137-1153195:1:exon
so has part: feature:1153719-1154248:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1145084-1145573:1:exon

position:1145573:1
position: 1145573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1145774-1145919:1:exon

position:1145774:1
position: 1145774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1145919:1
position: 1145919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1146002-1146048:1:exon

position:1146002:1
position: 1146002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1146048:1
position: 1146048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1146182-1146282:1:exon

position:1146182:1
position: 1146182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1146282:1
position: 1146282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1147133-1147249:1:exon

position:1147133:1
position: 1147133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1147249:1
position: 1147249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1148089-1148180:1:exon

position:1148089:1
position: 1148089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1148180:1
position: 1148180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1149264-1149389:1:exon

position:1149264:1
position: 1149264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1149389:1
position: 1149389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1149730-1149843:1:exon

position:1149730:1
position: 1149730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1149843:1
position: 1149843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1150514-1150593:1:exon

position:1150514:1
position: 1150514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1150593:1
position: 1150593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1150726-1151021:1:exon

position:1150726:1
position: 1150726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1151021:1
position: 1151021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1152285-1152407:1:exon

position:1152285:1
position: 1152285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1152407:1
position: 1152407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1153137-1153195:1:exon

position:1153137:1
position: 1153137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1153195:1
position: 1153195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1153719-1154248:1:exon

position:1153719:1
position: 1153719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OGFOD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: OGFOD1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: prolyl 3-hydroxylase OGFOD1
translation: MVLSSVSGFVCWMYLLPNWLTPRGQPVCERLGGTTDMAXRRRERRVSAGRREPRPPLTPARPRAPRAACRDRAPPSPPRPLAGGTPPRSRAIRLAARGAARVPPGVAVRPGGVMAAKRRGAGAPPGAKRGKREARAELCAALGDAALRERAGAAWARGERLQHEAAALEPAPFRHAVIPGFLAGAAFAEALRDELLGLGFHGRHNDLLSLRQSEELGASPEPHIAALRNALCEEFRPWLSAVTQIELEPTIDISCAKYEYTDVLLCHDDELEGRRIAFILYLVPAWESSDGGTLDLFSTDEHLQPQHITKSLVPSWNTLVFFEVSPVSFHQVSEVVSRKCRLSVSGWFHGPAVPRPTRHAEAPLPRSPHIPYDHEILYEWINPVYLDMDSQAQIQEEFEERSEILLKDFLKKEKYQLLCEALENKEIQWSSRGPANKRLYEAAEEVSLPDTLKKFLQLLRSEALFLLLSNFTGLKLHFLAPSDEDEDAGEGRAADTAGHRSPKPEQEEAEQHTDGNPCEPEQPDSSGEAQDGETRSSSGAPVCAGELRCWTHGHYTLVHDTQATEFALDLLFFCGCEDWDPEYGGFTSYIAKGEDEELLTVNPEDNCLALVYRDKETMKFVKYINHRSLARLNKHPNRAGFWDFSFVYYE
SIO_010081: OGFOD1
subclass of: SO_0000673
so part of: OGFOD1
location: join(1145084..1145573,1145774..1145919,1146002..1146048,1146182..1146282,1147133..1147249,1148089..1148180,1149264..1149389,1149730..1149843,1150514..1150593,1150726..1151021,1152285..1152407,1153137..1153195,1153719..1153880)
location: region:1145084-1153880:1
so has part: feature:1145084-1145573:1:exon
so has part: feature:1145774-1145919:1:exon
so has part: feature:1146002-1146048:1:exon
so has part: feature:1146182-1146282:1:exon
so has part: feature:1147133-1147249:1:exon
so has part: feature:1148089-1148180:1:exon
so has part: feature:1149264-1149389:1:exon
so has part: feature:1149730-1149843:1:exon
so has part: feature:1150514-1150593:1:exon
so has part: feature:1150726-1151021:1:exon
so has part: feature:1152285-1152407:1:exon
so has part: feature:1153137-1153195:1:exon
so has part: feature:1153719-1153880:1:exon

XP_032556827.1
type: Protein
SIO_000068: ncbiprotein

position:1153880:1
position: 1153880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1145084-1145573:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1145774-1145919:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1146002-1146048:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1146182-1146282:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1147133-1147249:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1148089-1148180:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1149264-1149389:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1149730-1149843:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1150514-1150593:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1150726-1151021:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1152285-1152407:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1153137-1153195:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1153719-1153880:1:exon

BBS2
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: BBS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1159016..1175808)
location: region:1159016-1175808:-1
so has part: feature:1159016-1175808:-1:exon
subclass of: SO_0000010

116793243
type: Gene
SIO_000068: ncbigene

position:1159016:-1
position: 1159016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175808:-1
position: 1175808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1159016-1175808:-1:exon

BBS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: BBS2
product: Bardet-Biedl syndrome 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 17 ESTs, 5 long SRA reads, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032700935.1
SIO_010081: BBS2
subclass of: SO_0000673
so part of: BBS2
location: complement(join(1159016..1159423,1160077..1160225,1160911..1161023,1161491..1161628,1162107..1162238,1163051..1163180,1163793..1163964,1164538..1164682,1165478..1165617,1167455..1167590,1168863..1168949,1169846..1169950,1172119..1172196,1173199..1173261,1173537..1173662,1174054..1174281,1175578..1175808))
location: region:1159016-1175808:-1
so has part: feature:1175578-1175808:-1:exon
so has part: feature:1174054-1174281:-1:exon
so has part: feature:1173537-1173662:-1:exon
so has part: feature:1173199-1173261:-1:exon
so has part: feature:1172119-1172196:-1:exon
so has part: feature:1169846-1169950:-1:exon
so has part: feature:1168863-1168949:-1:exon
so has part: feature:1167455-1167590:-1:exon
so has part: feature:1165478-1165617:-1:exon
so has part: feature:1164538-1164682:-1:exon
so has part: feature:1163793-1163964:-1:exon
so has part: feature:1163051-1163180:-1:exon
so has part: feature:1162107-1162238:-1:exon
so has part: feature:1161491-1161628:-1:exon
so has part: feature:1160911-1161023:-1:exon
so has part: feature:1160077-1160225:-1:exon
so has part: feature:1159016-1159423:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1175578-1175808:-1:exon

position:1175578:-1
position: 1175578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1174054-1174281:-1:exon

position:1174054:-1
position: 1174054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1174281:-1
position: 1174281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1173537-1173662:-1:exon

position:1173537:-1
position: 1173537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1173662:-1
position: 1173662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1173199-1173261:-1:exon

position:1173199:-1
position: 1173199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1173261:-1
position: 1173261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1172119-1172196:-1:exon

position:1172119:-1
position: 1172119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1172196:-1
position: 1172196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1169846-1169950:-1:exon

position:1169846:-1
position: 1169846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1169950:-1
position: 1169950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1168863-1168949:-1:exon

position:1168863:-1
position: 1168863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1168949:-1
position: 1168949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1167455-1167590:-1:exon

position:1167455:-1
position: 1167455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167590:-1
position: 1167590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1165478-1165617:-1:exon

position:1165478:-1
position: 1165478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165617:-1
position: 1165617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1164538-1164682:-1:exon

position:1164538:-1
position: 1164538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1164682:-1
position: 1164682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1163793-1163964:-1:exon

position:1163793:-1
position: 1163793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1163964:-1
position: 1163964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1163051-1163180:-1:exon

position:1163051:-1
position: 1163051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1163180:-1
position: 1163180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1162107-1162238:-1:exon

position:1162107:-1
position: 1162107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1162238:-1
position: 1162238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1161491-1161628:-1:exon

position:1161491:-1
position: 1161491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1161628:-1
position: 1161628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1160911-1161023:-1:exon

position:1160911:-1
position: 1160911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1161023:-1
position: 1161023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1160077-1160225:-1:exon

position:1160077:-1
position: 1160077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1160225:-1
position: 1160225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1159016-1159423:-1:exon

position:1159423:-1
position: 1159423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BBS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: BBS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Bardet-Biedl syndrome 2 protein
translation: MLVPVFTLKLNHKILPRMVALGRYDGTHPCLAAATQAGKVFIHNPHARGQRTSTNRMVPSNQDSDISLLNINQGITCLASGVLNPQLGYDCLLVGTQTNLLAYDVYNNSDLFYREVSDGANAIVLGKLGDISPPLAIIGGNCALQGFDCEGNDHFWTVTGDNVRSLALCDFDGDGKTELLVGSEDFDIRVFKEDEIVAEMSETETITALSPMYGSRFGYALANGTVGVYDRTARYWRIKSKNQAMSIHAFDLNSDGVPELITGWSNGKVDARSDRTGEVIFKDNFASSIAGVVEGDYRMDGSTQLICCSVDGEVRGYLPGGEEMKGNLMDTSAEQDLIRELSQKKQNLLLELRNYEENAKAELNAELKEADGQRGVIPANTQLQTALSVNLGSDSQSAHVELCISTTNDTIIRAVLIFAEGIFEGESHVVHPSVQNLSSCVRVPLTPPKDVPVDLHIKAFVGYRHSTQFHVFELTRQLPRFSMYALSSPDSATEPLSFVNCTTNERPQRIVMWLNQSFLLPEDAEFQSAPFQVCFTSLRNAGQLCIKIKPGGEISINTDDIDLAGDIVQSLASFLAIEDLQVEADFPAYFEELRKVLVKVDEHHAVNQRLTADMAEHSNLIRSMLVQAEDARLLGDMKNMKTRYIELYDLNRDLINQYKIRCNNHTELLNNLKAVNQAIQRAGRLRVGKPKTQVISACRDAIRSNNFNTLFRIMRVGTASS
SIO_010081: BBS2
subclass of: SO_0000673
so part of: BBS2
location: complement(join(1159317..1159423,1160077..1160225,1160911..1161023,1161491..1161628,1162107..1162238,1163051..1163180,1163793..1163964,1164538..1164682,1165478..1165617,1167455..1167590,1168863..1168949,1169846..1169950,1172119..1172196,1173199..1173261,1173537..1173662,1174054..1174281,1175578..1175694))
location: region:1159317-1175694:-1
so has part: feature:1175578-1175694:-1:exon
so has part: feature:1174054-1174281:-1:exon
so has part: feature:1173537-1173662:-1:exon
so has part: feature:1173199-1173261:-1:exon
so has part: feature:1172119-1172196:-1:exon
so has part: feature:1169846-1169950:-1:exon
so has part: feature:1168863-1168949:-1:exon
so has part: feature:1167455-1167590:-1:exon
so has part: feature:1165478-1165617:-1:exon
so has part: feature:1164538-1164682:-1:exon
so has part: feature:1163793-1163964:-1:exon
so has part: feature:1163051-1163180:-1:exon
so has part: feature:1162107-1162238:-1:exon
so has part: feature:1161491-1161628:-1:exon
so has part: feature:1160911-1161023:-1:exon
so has part: feature:1160077-1160225:-1:exon
so has part: feature:1159317-1159423:-1:exon

XP_032556826.1
type: Protein
SIO_000068: ncbiprotein

position:1159317:-1
position: 1159317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175694:-1
position: 1175694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1175578-1175694:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1174054-1174281:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1173537-1173662:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1173199-1173261:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1172119-1172196:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1169846-1169950:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1168863-1168949:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1167455-1167590:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1165478-1165617:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1164538-1164682:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1163793-1163964:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1163051-1163180:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1162107-1162238:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1161491-1161628:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1160911-1161023:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1160077-1160225:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1159317-1159423:-1:exon

LOC116793602
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: LOC116793602
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1184299..1185609
location: region:1184299-1185609:1
so has part: feature:1184299-1185609:1:exon
subclass of: SO_0000010

116793602
type: Gene
SIO_000068: ncbigene

position:1184299:1
position: 1184299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1185609:1
position: 1185609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1184299-1185609:1:exon

LOC116793602
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: LOC116793602
product: metallothionein-1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 1 long SRA read, 3 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_032701552.1
SIO_010081: LOC116793602
subclass of: SO_0000673
so part of: LOC116793602
location: join(1184299..1184471,1184813..1184878,1185364..1185609)
location: region:1184299-1185609:1
so has part: feature:1184299-1184471:1:exon
so has part: feature:1184813-1184878:1:exon
so has part: feature:1185364-1185609:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1184299-1184471:1:exon

position:1184471:1
position: 1184471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1184813-1184878:1:exon

position:1184813:1
position: 1184813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1184878:1
position: 1184878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1185364-1185609:1:exon

position:1185364:1
position: 1185364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116793602
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: LOC116793602
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metallothionein-1
translation: MDSQDCPCATGGTCTCGDNCKCKNCKCTSCKKGCCSCCPAGCAKCAQGCVCKGPPSAKCSCCK
SIO_010081: LOC116793602
subclass of: SO_0000673
so part of: LOC116793602
location: join(1184441..1184471,1184813..1184878,1185364..1185458)
location: region:1184441-1185458:1
so has part: feature:1184441-1184471:1:exon
so has part: feature:1184813-1184878:1:exon
so has part: feature:1185364-1185458:1:exon

XP_032557443.1
type: Protein
SIO_000068: ncbiprotein

position:1184441:1
position: 1184441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1185458:1
position: 1185458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1184441-1184471:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1184813-1184878:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1185364-1185458:1:exon

NUP93
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: NUP93
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1196197..1273443
location: region:1196197-1273443:1
so has part: feature:1196197-1273443:1:exon
subclass of: SO_0000010

116793483
type: Gene
SIO_000068: ncbigene

position:1196197:1
position: 1196197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1273443:1
position: 1273443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1196197-1273443:1:exon

NUP93
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: NUP93
product: nucleoporin 93, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032701357.1
SIO_010081: NUP93
subclass of: SO_0000673
so part of: NUP93
location: join(1196197..1196241,1202554..1202760,1204122..1204239,1244357..1244419,1246149..1246277,1251927..1252028,1252708..1252782,1254929..1255018,1256354..1256493,1258558..1258690,1259644..1259801,1261190..1261355,1262165..1262258,1263284..1263475,1263708..1263834,1263947..1264019,1264347..1264391,1265139..1265255,1265899..1266017,1267255..1267372,1267743..1267826,1268596..1268724,1273203..1273443)
location: region:1196197-1273443:1
so has part: feature:1196197-1196241:1:exon
so has part: feature:1202554-1202760:1:exon
so has part: feature:1204122-1204239:1:exon
so has part: feature:1244357-1244419:1:exon
so has part: feature:1246149-1246277:1:exon
so has part: feature:1251927-1252028:1:exon
so has part: feature:1252708-1252782:1:exon
so has part: feature:1254929-1255018:1:exon
so has part: feature:1256354-1256493:1:exon
so has part: feature:1258558-1258690:1:exon
so has part: feature:1259644-1259801:1:exon
so has part: feature:1261190-1261355:1:exon
so has part: feature:1262165-1262258:1:exon
so has part: feature:1263284-1263475:1:exon
so has part: feature:1263708-1263834:1:exon
so has part: feature:1263947-1264019:1:exon
so has part: feature:1264347-1264391:1:exon
so has part: feature:1265139-1265255:1:exon
so has part: feature:1265899-1266017:1:exon
so has part: feature:1267255-1267372:1:exon
so has part: feature:1267743-1267826:1:exon
so has part: feature:1268596-1268724:1:exon
so has part: feature:1273203-1273443:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1196197-1196241:1:exon

position:1196241:1
position: 1196241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1202554-1202760:1:exon

position:1202554:1
position: 1202554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1202760:1
position: 1202760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1204122-1204239:1:exon

position:1204122:1
position: 1204122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1204239:1
position: 1204239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1244357-1244419:1:exon

position:1244357:1
position: 1244357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1244419:1
position: 1244419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1246149-1246277:1:exon

position:1246149:1
position: 1246149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1246277:1
position: 1246277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1251927-1252028:1:exon

position:1251927:1
position: 1251927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1252028:1
position: 1252028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1252708-1252782:1:exon

position:1252708:1
position: 1252708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1252782:1
position: 1252782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1254929-1255018:1:exon

position:1254929:1
position: 1254929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1255018:1
position: 1255018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1256354-1256493:1:exon

position:1256354:1
position: 1256354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1256493:1
position: 1256493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1258558-1258690:1:exon

position:1258558:1
position: 1258558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1258690:1
position: 1258690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1259644-1259801:1:exon

position:1259644:1
position: 1259644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1259801:1
position: 1259801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1261190-1261355:1:exon

position:1261190:1
position: 1261190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1261355:1
position: 1261355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1262165-1262258:1:exon

position:1262165:1
position: 1262165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1262258:1
position: 1262258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1263284-1263475:1:exon

position:1263284:1
position: 1263284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1263475:1
position: 1263475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1263708-1263834:1:exon

position:1263708:1
position: 1263708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1263834:1
position: 1263834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1263947-1264019:1:exon

position:1263947:1
position: 1263947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1264019:1
position: 1264019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1264347-1264391:1:exon

position:1264347:1
position: 1264347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1264391:1
position: 1264391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1265139-1265255:1:exon

position:1265139:1
position: 1265139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1265255:1
position: 1265255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1265899-1266017:1:exon

position:1265899:1
position: 1265899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1266017:1
position: 1266017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1267255-1267372:1:exon

position:1267255:1
position: 1267255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1267372:1
position: 1267372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1267743-1267826:1:exon

position:1267743:1
position: 1267743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1267826:1
position: 1267826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1268596-1268724:1:exon

position:1268596:1
position: 1268596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1268724:1
position: 1268724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1273203-1273443:1:exon

position:1273203:1
position: 1273203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NUP93
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: NUP93
product: nucleoporin 93, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 1 long SRA read, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032701355.1
SIO_010081: NUP93
subclass of: SO_0000673
so part of: NUP93
location: join(1197134..1197273,1202554..1202760,1204122..1204239,1244357..1244419,1246149..1246277,1251927..1252028,1252708..1252782,1254929..1255018,1256354..1256493,1258558..1258690,1259644..1259801,1261190..1261355,1262165..1262258,1263284..1263475,1263708..1263834,1263947..1264019,1264347..1264391,1265139..1265255,1265899..1266017,1267255..1267372,1267743..1267826,1268596..1268724,1273203..1273438)
location: region:1197134-1273438:1
so has part: feature:1197134-1197273:1:exon
so has part: feature:1202554-1202760:1:exon
so has part: feature:1204122-1204239:1:exon
so has part: feature:1244357-1244419:1:exon
so has part: feature:1246149-1246277:1:exon
so has part: feature:1251927-1252028:1:exon
so has part: feature:1252708-1252782:1:exon
so has part: feature:1254929-1255018:1:exon
so has part: feature:1256354-1256493:1:exon
so has part: feature:1258558-1258690:1:exon
so has part: feature:1259644-1259801:1:exon
so has part: feature:1261190-1261355:1:exon
so has part: feature:1262165-1262258:1:exon
so has part: feature:1263284-1263475:1:exon
so has part: feature:1263708-1263834:1:exon
so has part: feature:1263947-1264019:1:exon
so has part: feature:1264347-1264391:1:exon
so has part: feature:1265139-1265255:1:exon
so has part: feature:1265899-1266017:1:exon
so has part: feature:1267255-1267372:1:exon
so has part: feature:1267743-1267826:1:exon
so has part: feature:1268596-1268724:1:exon
so has part: feature:1273203-1273438:1:exon

position:1197134:1
position: 1197134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1273438:1
position: 1273438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1197134-1197273:1:exon

position:1197273:1
position: 1197273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1202554-1202760:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1204122-1204239:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1244357-1244419:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1246149-1246277:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1251927-1252028:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1252708-1252782:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1254929-1255018:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1256354-1256493:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1258558-1258690:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1259644-1259801:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1261190-1261355:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1262165-1262258:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1263284-1263475:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1263708-1263834:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1263947-1264019:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1264347-1264391:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1265139-1265255:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1265899-1266017:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1267255-1267372:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1267743-1267826:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1268596-1268724:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1273203-1273438:1:exon

NUP93
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: NUP93
product: nucleoporin 93, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 1 long SRA read, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032701356.1
SIO_010081: NUP93
subclass of: SO_0000673
so part of: NUP93
location: join(1198577..1198675,1202554..1202760,1204122..1204239,1244357..1244419,1246149..1246277,1251927..1252028,1252708..1252782,1254929..1255018,1256354..1256493,1258558..1258690,1259644..1259801,1261190..1261355,1262165..1262258,1263284..1263475,1263708..1263834,1263947..1264019,1264347..1264391,1265139..1265255,1265899..1266017,1267255..1267372,1267743..1267826,1268596..1268724,1273203..1273438)
location: region:1198577-1273438:1
so has part: feature:1198577-1198675:1:exon
so has part: feature:1202554-1202760:1:exon
so has part: feature:1204122-1204239:1:exon
so has part: feature:1244357-1244419:1:exon
so has part: feature:1246149-1246277:1:exon
so has part: feature:1251927-1252028:1:exon
so has part: feature:1252708-1252782:1:exon
so has part: feature:1254929-1255018:1:exon
so has part: feature:1256354-1256493:1:exon
so has part: feature:1258558-1258690:1:exon
so has part: feature:1259644-1259801:1:exon
so has part: feature:1261190-1261355:1:exon
so has part: feature:1262165-1262258:1:exon
so has part: feature:1263284-1263475:1:exon
so has part: feature:1263708-1263834:1:exon
so has part: feature:1263947-1264019:1:exon
so has part: feature:1264347-1264391:1:exon
so has part: feature:1265139-1265255:1:exon
so has part: feature:1265899-1266017:1:exon
so has part: feature:1267255-1267372:1:exon
so has part: feature:1267743-1267826:1:exon
so has part: feature:1268596-1268724:1:exon
so has part: feature:1273203-1273438:1:exon

position:1198577:1
position: 1198577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1198577-1198675:1:exon

position:1198675:1
position: 1198675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1202554-1202760:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1204122-1204239:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1244357-1244419:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1246149-1246277:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1251927-1252028:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1252708-1252782:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1254929-1255018:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1256354-1256493:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1258558-1258690:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1259644-1259801:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1261190-1261355:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1262165-1262258:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1263284-1263475:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1263708-1263834:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1263947-1264019:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1264347-1264391:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1265139-1265255:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1265899-1266017:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1267255-1267372:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1267743-1267826:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1268596-1268724:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1273203-1273438:1:exon

NUP93
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: NUP93
product: nucleoporin 93, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 5 long SRA reads, 17 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032701358.1
SIO_010081: NUP93
subclass of: SO_0000673
so part of: NUP93
location: join(1202552..1202760,1204122..1204239,1244357..1244419,1246149..1246277,1252708..1252782,1254929..1255018,1256354..1256493,1258558..1258690,1259644..1259801,1261190..1261355,1262165..1262258,1263284..1263475,1263708..1263834,1263947..1264019,1264347..1264391,1265139..1265255,1265899..1266017,1267255..1267372,1267743..1267826,1268596..1268724,1273203..1273442)
location: region:1202552-1273442:1
so has part: feature:1202552-1202760:1:exon
so has part: feature:1204122-1204239:1:exon
so has part: feature:1244357-1244419:1:exon
so has part: feature:1246149-1246277:1:exon
so has part: feature:1252708-1252782:1:exon
so has part: feature:1254929-1255018:1:exon
so has part: feature:1256354-1256493:1:exon
so has part: feature:1258558-1258690:1:exon
so has part: feature:1259644-1259801:1:exon
so has part: feature:1261190-1261355:1:exon
so has part: feature:1262165-1262258:1:exon
so has part: feature:1263284-1263475:1:exon
so has part: feature:1263708-1263834:1:exon
so has part: feature:1263947-1264019:1:exon
so has part: feature:1264347-1264391:1:exon
so has part: feature:1265139-1265255:1:exon
so has part: feature:1265899-1266017:1:exon
so has part: feature:1267255-1267372:1:exon
so has part: feature:1267743-1267826:1:exon
so has part: feature:1268596-1268724:1:exon
so has part: feature:1273203-1273442:1:exon

position:1202552:1
position: 1202552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1273442:1
position: 1273442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1202552-1202760:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1204122-1204239:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1244357-1244419:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1246149-1246277:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1252708-1252782:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1254929-1255018:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1256354-1256493:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1258558-1258690:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1259644-1259801:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1261190-1261355:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1262165-1262258:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1263284-1263475:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1263708-1263834:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1263947-1264019:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1264347-1264391:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1265139-1265255:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1265899-1266017:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1267255-1267372:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1267743-1267826:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1268596-1268724:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1273203-1273442:1:exon

NUP93
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: NUP93
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear pore complex protein Nup93 isoform X1
translation: MDTDGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRTLTRTSQETADVKASVLLGSRGLDISHISQRLESLSAVTTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRRRTFAMAEEYHRESMLVEWEQVKQRILHSLLASGEDALDFTQENESAEHPCSVVAVLRTYQCFVMKTYKNSFMQNWTILPSYVGEVGPPGRSSLDSVEMAYARQIYIYNEKIVNGHLQPNLVDLCAATAGLDDKNISEMWAMVKQMTDVTLVPASDALKVRTNMEVRMEFVRHALHYLEQSYKNYTFVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPASVPGLQDGEVEGHPVWALIYYCMRCGDLTAAMHVVKRAQHQLGEFKTWFQEYMHSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDITDNQSEIADKTEDYLWLKLNQVCFDDGGASSPQDRLTLSQFQKQLLEDYGESHFAVNQPPFLYFQVLFLTAQFEAAIAFLFRTERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEVGDPPGVRRLNFARLLMLYTRKFESTDPREALQYFYFLRNEKDSQGENMFLRCVSEIVIESREFDMILGKLEKDGSRKPGVIDKFTSDTKSVINKVASAAENKGLFEEAAKLYDLAKNPDKVLELMNKLLSPVVPQISTPQSNKERLKNMAHSIAERYKAQGISAKKSIDSTFYLLLDLITFFDEYHAGHVDRAFDIIERLKLVPLSQDCVKERVAAFRNFSDEIKHNLSEVLLATMNILFTKYKRMKGTSPTTPARPQRVMEDRDSQLQSQARALIMFAGMIPYRTSGDTNARLVQMEILMN
SIO_010081: NUP93
subclass of: SO_0000673
so part of: NUP93
location: join(1202582..1202760,1204122..1204239,1244357..1244419,1246149..1246277,1251927..1252028,1252708..1252782,1254929..1255018,1256354..1256493,1258558..1258690,1259644..1259801,1261190..1261355,1262165..1262258,1263284..1263475,1263708..1263834,1263947..1264019,1264347..1264391,1265139..1265255,1265899..1266017,1267255..1267372,1267743..1267826,1268596..1268724,1273203..1273313)
location: region:1202582-1273313:1
so has part: feature:1202582-1202760:1:exon
so has part: feature:1204122-1204239:1:exon
so has part: feature:1244357-1244419:1:exon
so has part: feature:1246149-1246277:1:exon
so has part: feature:1251927-1252028:1:exon
so has part: feature:1252708-1252782:1:exon
so has part: feature:1254929-1255018:1:exon
so has part: feature:1256354-1256493:1:exon
so has part: feature:1258558-1258690:1:exon
so has part: feature:1259644-1259801:1:exon
so has part: feature:1261190-1261355:1:exon
so has part: feature:1262165-1262258:1:exon
so has part: feature:1263284-1263475:1:exon
so has part: feature:1263708-1263834:1:exon
so has part: feature:1263947-1264019:1:exon
so has part: feature:1264347-1264391:1:exon
so has part: feature:1265139-1265255:1:exon
so has part: feature:1265899-1266017:1:exon
so has part: feature:1267255-1267372:1:exon
so has part: feature:1267743-1267826:1:exon
so has part: feature:1268596-1268724:1:exon
so has part: feature:1273203-1273313:1:exon

XP_032557246.1
type: Protein
SIO_000068: ncbiprotein

position:1202582:1
position: 1202582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1273313:1
position: 1273313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1202582-1202760:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1204122-1204239:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1244357-1244419:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1246149-1246277:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1251927-1252028:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1252708-1252782:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1254929-1255018:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1256354-1256493:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1258558-1258690:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1259644-1259801:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1261190-1261355:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1262165-1262258:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1263284-1263475:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1263708-1263834:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1263947-1264019:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1264347-1264391:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1265139-1265255:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1265899-1266017:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1267255-1267372:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1267743-1267826:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1268596-1268724:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1273203-1273313:1:exon

NUP93
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: NUP93
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear pore complex protein Nup93 isoform X1
translation: MDTDGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRTLTRTSQETADVKASVLLGSRGLDISHISQRLESLSAVTTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRRRTFAMAEEYHRESMLVEWEQVKQRILHSLLASGEDALDFTQENESAEHPCSVVAVLRTYQCFVMKTYKNSFMQNWTILPSYVGEVGPPGRSSLDSVEMAYARQIYIYNEKIVNGHLQPNLVDLCAATAGLDDKNISEMWAMVKQMTDVTLVPASDALKVRTNMEVRMEFVRHALHYLEQSYKNYTFVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPASVPGLQDGEVEGHPVWALIYYCMRCGDLTAAMHVVKRAQHQLGEFKTWFQEYMHSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDITDNQSEIADKTEDYLWLKLNQVCFDDGGASSPQDRLTLSQFQKQLLEDYGESHFAVNQPPFLYFQVLFLTAQFEAAIAFLFRTERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEVGDPPGVRRLNFARLLMLYTRKFESTDPREALQYFYFLRNEKDSQGENMFLRCVSEIVIESREFDMILGKLEKDGSRKPGVIDKFTSDTKSVINKVASAAENKGLFEEAAKLYDLAKNPDKVLELMNKLLSPVVPQISTPQSNKERLKNMAHSIAERYKAQGISAKKSIDSTFYLLLDLITFFDEYHAGHVDRAFDIIERLKLVPLSQDCVKERVAAFRNFSDEIKHNLSEVLLATMNILFTKYKRMKGTSPTTPARPQRVMEDRDSQLQSQARALIMFAGMIPYRTSGDTNARLVQMEILMN
SIO_010081: NUP93
subclass of: SO_0000673
so part of: NUP93
location: join(1202582..1202760,1204122..1204239,1244357..1244419,1246149..1246277,1251927..1252028,1252708..1252782,1254929..1255018,1256354..1256493,1258558..1258690,1259644..1259801,1261190..1261355,1262165..1262258,1263284..1263475,1263708..1263834,1263947..1264019,1264347..1264391,1265139..1265255,1265899..1266017,1267255..1267372,1267743..1267826,1268596..1268724,1273203..1273313)
location: region:1202582-1273313:1
so has part: feature:1202582-1202760:1:exon
so has part: feature:1204122-1204239:1:exon
so has part: feature:1244357-1244419:1:exon
so has part: feature:1246149-1246277:1:exon
so has part: feature:1251927-1252028:1:exon
so has part: feature:1252708-1252782:1:exon
so has part: feature:1254929-1255018:1:exon
so has part: feature:1256354-1256493:1:exon
so has part: feature:1258558-1258690:1:exon
so has part: feature:1259644-1259801:1:exon
so has part: feature:1261190-1261355:1:exon
so has part: feature:1262165-1262258:1:exon
so has part: feature:1263284-1263475:1:exon
so has part: feature:1263708-1263834:1:exon
so has part: feature:1263947-1264019:1:exon
so has part: feature:1264347-1264391:1:exon
so has part: feature:1265139-1265255:1:exon
so has part: feature:1265899-1266017:1:exon
so has part: feature:1267255-1267372:1:exon
so has part: feature:1267743-1267826:1:exon
so has part: feature:1268596-1268724:1:exon
so has part: feature:1273203-1273313:1:exon

XP_032557247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1202582-1202760:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1204122-1204239:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1244357-1244419:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1246149-1246277:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1251927-1252028:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1252708-1252782:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1254929-1255018:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1256354-1256493:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1258558-1258690:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1259644-1259801:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1261190-1261355:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1262165-1262258:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1263284-1263475:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1263708-1263834:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1263947-1264019:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1264347-1264391:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1265139-1265255:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1265899-1266017:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1267255-1267372:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1267743-1267826:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1268596-1268724:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1273203-1273313:1:exon

NUP93
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: NUP93
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear pore complex protein Nup93 isoform X1
translation: MDTDGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRTLTRTSQETADVKASVLLGSRGLDISHISQRLESLSAVTTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRRRTFAMAEEYHRESMLVEWEQVKQRILHSLLASGEDALDFTQENESAEHPCSVVAVLRTYQCFVMKTYKNSFMQNWTILPSYVGEVGPPGRSSLDSVEMAYARQIYIYNEKIVNGHLQPNLVDLCAATAGLDDKNISEMWAMVKQMTDVTLVPASDALKVRTNMEVRMEFVRHALHYLEQSYKNYTFVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPASVPGLQDGEVEGHPVWALIYYCMRCGDLTAAMHVVKRAQHQLGEFKTWFQEYMHSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDITDNQSEIADKTEDYLWLKLNQVCFDDGGASSPQDRLTLSQFQKQLLEDYGESHFAVNQPPFLYFQVLFLTAQFEAAIAFLFRTERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEVGDPPGVRRLNFARLLMLYTRKFESTDPREALQYFYFLRNEKDSQGENMFLRCVSEIVIESREFDMILGKLEKDGSRKPGVIDKFTSDTKSVINKVASAAENKGLFEEAAKLYDLAKNPDKVLELMNKLLSPVVPQISTPQSNKERLKNMAHSIAERYKAQGISAKKSIDSTFYLLLDLITFFDEYHAGHVDRAFDIIERLKLVPLSQDCVKERVAAFRNFSDEIKHNLSEVLLATMNILFTKYKRMKGTSPTTPARPQRVMEDRDSQLQSQARALIMFAGMIPYRTSGDTNARLVQMEILMN
SIO_010081: NUP93
subclass of: SO_0000673
so part of: NUP93
location: join(1202582..1202760,1204122..1204239,1244357..1244419,1246149..1246277,1251927..1252028,1252708..1252782,1254929..1255018,1256354..1256493,1258558..1258690,1259644..1259801,1261190..1261355,1262165..1262258,1263284..1263475,1263708..1263834,1263947..1264019,1264347..1264391,1265139..1265255,1265899..1266017,1267255..1267372,1267743..1267826,1268596..1268724,1273203..1273313)
location: region:1202582-1273313:1
so has part: feature:1202582-1202760:1:exon
so has part: feature:1204122-1204239:1:exon
so has part: feature:1244357-1244419:1:exon
so has part: feature:1246149-1246277:1:exon
so has part: feature:1251927-1252028:1:exon
so has part: feature:1252708-1252782:1:exon
so has part: feature:1254929-1255018:1:exon
so has part: feature:1256354-1256493:1:exon
so has part: feature:1258558-1258690:1:exon
so has part: feature:1259644-1259801:1:exon
so has part: feature:1261190-1261355:1:exon
so has part: feature:1262165-1262258:1:exon
so has part: feature:1263284-1263475:1:exon
so has part: feature:1263708-1263834:1:exon
so has part: feature:1263947-1264019:1:exon
so has part: feature:1264347-1264391:1:exon
so has part: feature:1265139-1265255:1:exon
so has part: feature:1265899-1266017:1:exon
so has part: feature:1267255-1267372:1:exon
so has part: feature:1267743-1267826:1:exon
so has part: feature:1268596-1268724:1:exon
so has part: feature:1273203-1273313:1:exon

XP_032557248.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1202582-1202760:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1204122-1204239:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1244357-1244419:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1246149-1246277:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1251927-1252028:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1252708-1252782:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1254929-1255018:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1256354-1256493:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1258558-1258690:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1259644-1259801:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1261190-1261355:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1262165-1262258:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1263284-1263475:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1263708-1263834:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1263947-1264019:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1264347-1264391:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1265139-1265255:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1265899-1266017:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1267255-1267372:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1267743-1267826:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1268596-1268724:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1273203-1273313:1:exon

NUP93
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: NUP93
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear pore complex protein Nup93 isoform X2
translation: MDTDGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRTLTRTSQETADVKASVLLGSRGLDISHISQRLESLSAVTTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRRRTFAMAEEYHRESMLVEWEQVKQRILHSLLASGEDALDFTQENEPSYVGEVGPPGRSSLDSVEMAYARQIYIYNEKIVNGHLQPNLVDLCAATAGLDDKNISEMWAMVKQMTDVTLVPASDALKVRTNMEVRMEFVRHALHYLEQSYKNYTFVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPASVPGLQDGEVEGHPVWALIYYCMRCGDLTAAMHVVKRAQHQLGEFKTWFQEYMHSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDITDNQSEIADKTEDYLWLKLNQVCFDDGGASSPQDRLTLSQFQKQLLEDYGESHFAVNQPPFLYFQVLFLTAQFEAAIAFLFRTERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEVGDPPGVRRLNFARLLMLYTRKFESTDPREALQYFYFLRNEKDSQGENMFLRCVSEIVIESREFDMILGKLEKDGSRKPGVIDKFTSDTKSVINKVASAAENKGLFEEAAKLYDLAKNPDKVLELMNKLLSPVVPQISTPQSNKERLKNMAHSIAERYKAQGISAKKSIDSTFYLLLDLITFFDEYHAGHVDRAFDIIERLKLVPLSQDCVKERVAAFRNFSDEIKHNLSEVLLATMNILFTKYKRMKGTSPTTPARPQRVMEDRDSQLQSQARALIMFAGMIPYRTSGDTNARLVQMEILMN
SIO_010081: NUP93
subclass of: SO_0000673
so part of: NUP93
location: join(1202582..1202760,1204122..1204239,1244357..1244419,1246149..1246277,1252708..1252782,1254929..1255018,1256354..1256493,1258558..1258690,1259644..1259801,1261190..1261355,1262165..1262258,1263284..1263475,1263708..1263834,1263947..1264019,1264347..1264391,1265139..1265255,1265899..1266017,1267255..1267372,1267743..1267826,1268596..1268724,1273203..1273313)
location: region:1202582-1273313:1
so has part: feature:1202582-1202760:1:exon
so has part: feature:1204122-1204239:1:exon
so has part: feature:1244357-1244419:1:exon
so has part: feature:1246149-1246277:1:exon
so has part: feature:1252708-1252782:1:exon
so has part: feature:1254929-1255018:1:exon
so has part: feature:1256354-1256493:1:exon
so has part: feature:1258558-1258690:1:exon
so has part: feature:1259644-1259801:1:exon
so has part: feature:1261190-1261355:1:exon
so has part: feature:1262165-1262258:1:exon
so has part: feature:1263284-1263475:1:exon
so has part: feature:1263708-1263834:1:exon
so has part: feature:1263947-1264019:1:exon
so has part: feature:1264347-1264391:1:exon
so has part: feature:1265139-1265255:1:exon
so has part: feature:1265899-1266017:1:exon
so has part: feature:1267255-1267372:1:exon
so has part: feature:1267743-1267826:1:exon
so has part: feature:1268596-1268724:1:exon
so has part: feature:1273203-1273313:1:exon

XP_032557249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1202582-1202760:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1204122-1204239:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1244357-1244419:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1246149-1246277:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1252708-1252782:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1254929-1255018:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1256354-1256493:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1258558-1258690:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1259644-1259801:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1261190-1261355:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1262165-1262258:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1263284-1263475:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1263708-1263834:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1263947-1264019:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1264347-1264391:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1265139-1265255:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1265899-1266017:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1267255-1267372:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1267743-1267826:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1268596-1268724:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1273203-1273313:1:exon

NUP93
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: NUP93
product: nucleoporin 93, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 1 long SRA read, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032701361.1
SIO_010081: NUP93
subclass of: SO_0000673
so part of: NUP93
location: join(1231410..1231566,1244357..1244419,1246149..1246277,1251927..1252028,1252708..1252782,1254929..1255018,1256354..1256493,1258558..1258690,1259644..1259801,1261190..1261355,1262165..1262258,1263284..1263475,1263708..1263834,1263947..1264019,1264347..1264391,1265139..1265255,1265899..1266017,1267255..1267372,1267743..1267826,1268596..1268724,1273203..1273438)
location: region:1231410-1273438:1
so has part: feature:1231410-1231566:1:exon
so has part: feature:1244357-1244419:1:exon
so has part: feature:1246149-1246277:1:exon
so has part: feature:1251927-1252028:1:exon
so has part: feature:1252708-1252782:1:exon
so has part: feature:1254929-1255018:1:exon
so has part: feature:1256354-1256493:1:exon
so has part: feature:1258558-1258690:1:exon
so has part: feature:1259644-1259801:1:exon
so has part: feature:1261190-1261355:1:exon
so has part: feature:1262165-1262258:1:exon
so has part: feature:1263284-1263475:1:exon
so has part: feature:1263708-1263834:1:exon
so has part: feature:1263947-1264019:1:exon
so has part: feature:1264347-1264391:1:exon
so has part: feature:1265139-1265255:1:exon
so has part: feature:1265899-1266017:1:exon
so has part: feature:1267255-1267372:1:exon
so has part: feature:1267743-1267826:1:exon
so has part: feature:1268596-1268724:1:exon
so has part: feature:1273203-1273438:1:exon

position:1231410:1
position: 1231410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1231410-1231566:1:exon

position:1231566:1
position: 1231566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1244357-1244419:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1246149-1246277:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1251927-1252028:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1252708-1252782:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1254929-1255018:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1256354-1256493:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1258558-1258690:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1259644-1259801:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1261190-1261355:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1262165-1262258:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1263284-1263475:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1263708-1263834:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1263947-1264019:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1264347-1264391:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1265139-1265255:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1265899-1266017:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1267255-1267372:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1267743-1267826:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1268596-1268724:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1273203-1273438:1:exon

NUP93
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: NUP93
product: nucleoporin 93, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 1 long SRA read, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032701360.1
SIO_010081: NUP93
subclass of: SO_0000673
so part of: NUP93
location: join(1234348..1234596,1244357..1244419,1246149..1246277,1251927..1252028,1252708..1252782,1254929..1255018,1256354..1256493,1258558..1258690,1259644..1259801,1261190..1261355,1262165..1262258,1263284..1263475,1263708..1263834,1263947..1264019,1264347..1264391,1265139..1265255,1265899..1266017,1267255..1267372,1267743..1267826,1268596..1268724,1273203..1273438)
location: region:1234348-1273438:1
so has part: feature:1234348-1234596:1:exon
so has part: feature:1244357-1244419:1:exon
so has part: feature:1246149-1246277:1:exon
so has part: feature:1251927-1252028:1:exon
so has part: feature:1252708-1252782:1:exon
so has part: feature:1254929-1255018:1:exon
so has part: feature:1256354-1256493:1:exon
so has part: feature:1258558-1258690:1:exon
so has part: feature:1259644-1259801:1:exon
so has part: feature:1261190-1261355:1:exon
so has part: feature:1262165-1262258:1:exon
so has part: feature:1263284-1263475:1:exon
so has part: feature:1263708-1263834:1:exon
so has part: feature:1263947-1264019:1:exon
so has part: feature:1264347-1264391:1:exon
so has part: feature:1265139-1265255:1:exon
so has part: feature:1265899-1266017:1:exon
so has part: feature:1267255-1267372:1:exon
so has part: feature:1267743-1267826:1:exon
so has part: feature:1268596-1268724:1:exon
so has part: feature:1273203-1273438:1:exon

position:1234348:1
position: 1234348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1234348-1234596:1:exon

position:1234596:1
position: 1234596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1244357-1244419:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1246149-1246277:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1251927-1252028:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1252708-1252782:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1254929-1255018:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1256354-1256493:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1258558-1258690:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1259644-1259801:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1261190-1261355:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1262165-1262258:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1263284-1263475:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1263708-1263834:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1263947-1264019:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1264347-1264391:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1265139-1265255:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1265899-1266017:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1267255-1267372:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1267743-1267826:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1268596-1268724:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1273203-1273438:1:exon

NUP93
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: NUP93
product: nucleoporin 93, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 1 long SRA read, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032701359.1
SIO_010081: NUP93
subclass of: SO_0000673
so part of: NUP93
location: join(1235600..1235622,1244357..1244419,1246149..1246277,1251927..1252028,1252708..1252782,1254929..1255018,1256354..1256493,1258558..1258690,1259644..1259801,1261190..1261355,1262165..1262258,1263284..1263475,1263708..1263834,1263947..1264019,1264347..1264391,1265139..1265255,1265899..1266017,1267255..1267372,1267743..1267826,1268596..1268724,1273203..1273438)
location: region:1235600-1273438:1
so has part: feature:1235600-1235622:1:exon
so has part: feature:1244357-1244419:1:exon
so has part: feature:1246149-1246277:1:exon
so has part: feature:1251927-1252028:1:exon
so has part: feature:1252708-1252782:1:exon
so has part: feature:1254929-1255018:1:exon
so has part: feature:1256354-1256493:1:exon
so has part: feature:1258558-1258690:1:exon
so has part: feature:1259644-1259801:1:exon
so has part: feature:1261190-1261355:1:exon
so has part: feature:1262165-1262258:1:exon
so has part: feature:1263284-1263475:1:exon
so has part: feature:1263708-1263834:1:exon
so has part: feature:1263947-1264019:1:exon
so has part: feature:1264347-1264391:1:exon
so has part: feature:1265139-1265255:1:exon
so has part: feature:1265899-1266017:1:exon
so has part: feature:1267255-1267372:1:exon
so has part: feature:1267743-1267826:1:exon
so has part: feature:1268596-1268724:1:exon
so has part: feature:1273203-1273438:1:exon

position:1235600:1
position: 1235600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1235600-1235622:1:exon

position:1235622:1
position: 1235622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1244357-1244419:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1246149-1246277:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1251927-1252028:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1252708-1252782:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1254929-1255018:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1256354-1256493:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1258558-1258690:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1259644-1259801:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1261190-1261355:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1262165-1262258:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1263284-1263475:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1263708-1263834:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1263947-1264019:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1264347-1264391:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1265139-1265255:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1265899-1266017:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1267255-1267372:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1267743-1267826:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1268596-1268724:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1273203-1273438:1:exon

NUP93
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: NUP93
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear pore complex protein Nup93 isoform X3
translation: MAEEYHRESMLVEWEQVKQRILHSLLASGEDALDFTQENESAEHPCSVVAVLRTYQCFVMKTYKNSFMQNWTILPSYVGEVGPPGRSSLDSVEMAYARQIYIYNEKIVNGHLQPNLVDLCAATAGLDDKNISEMWAMVKQMTDVTLVPASDALKVRTNMEVRMEFVRHALHYLEQSYKNYTFVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPASVPGLQDGEVEGHPVWALIYYCMRCGDLTAAMHVVKRAQHQLGEFKTWFQEYMHSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDITDNQSEIADKTEDYLWLKLNQVCFDDGGASSPQDRLTLSQFQKQLLEDYGESHFAVNQPPFLYFQVLFLTAQFEAAIAFLFRTERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEVGDPPGVRRLNFARLLMLYTRKFESTDPREALQYFYFLRNEKDSQGENMFLRCVSEIVIESREFDMILGKLEKDGSRKPGVIDKFTSDTKSVINKVASAAENKGLFEEAAKLYDLAKNPDKVLELMNKLLSPVVPQISTPQSNKERLKNMAHSIAERYKAQGISAKKSIDSTFYLLLDLITFFDEYHAGHVDRAFDIIERLKLVPLSQDCVKERVAAFRNFSDEIKHNLSEVLLATMNILFTKYKRMKGTSPTTPARPQRVMEDRDSQLQSQARALIMFAGMIPYRTSGDTNARLVQMEILMN
SIO_010081: NUP93
subclass of: SO_0000673
so part of: NUP93
location: join(1246158..1246277,1251927..1252028,1252708..1252782,1254929..1255018,1256354..1256493,1258558..1258690,1259644..1259801,1261190..1261355,1262165..1262258,1263284..1263475,1263708..1263834,1263947..1264019,1264347..1264391,1265139..1265255,1265899..1266017,1267255..1267372,1267743..1267826,1268596..1268724,1273203..1273313)
location: region:1246158-1273313:1
so has part: feature:1246158-1246277:1:exon
so has part: feature:1251927-1252028:1:exon
so has part: feature:1252708-1252782:1:exon
so has part: feature:1254929-1255018:1:exon
so has part: feature:1256354-1256493:1:exon
so has part: feature:1258558-1258690:1:exon
so has part: feature:1259644-1259801:1:exon
so has part: feature:1261190-1261355:1:exon
so has part: feature:1262165-1262258:1:exon
so has part: feature:1263284-1263475:1:exon
so has part: feature:1263708-1263834:1:exon
so has part: feature:1263947-1264019:1:exon
so has part: feature:1264347-1264391:1:exon
so has part: feature:1265139-1265255:1:exon
so has part: feature:1265899-1266017:1:exon
so has part: feature:1267255-1267372:1:exon
so has part: feature:1267743-1267826:1:exon
so has part: feature:1268596-1268724:1:exon
so has part: feature:1273203-1273313:1:exon

XP_032557250.1
type: Protein
SIO_000068: ncbiprotein

position:1246158:1
position: 1246158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1246158-1246277:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1251927-1252028:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1252708-1252782:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1254929-1255018:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1256354-1256493:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1258558-1258690:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1259644-1259801:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1261190-1261355:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1262165-1262258:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1263284-1263475:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1263708-1263834:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1263947-1264019:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1264347-1264391:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1265139-1265255:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1265899-1266017:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1267255-1267372:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1267743-1267826:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1268596-1268724:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1273203-1273313:1:exon

NUP93
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: NUP93
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear pore complex protein Nup93 isoform X3
translation: MAEEYHRESMLVEWEQVKQRILHSLLASGEDALDFTQENESAEHPCSVVAVLRTYQCFVMKTYKNSFMQNWTILPSYVGEVGPPGRSSLDSVEMAYARQIYIYNEKIVNGHLQPNLVDLCAATAGLDDKNISEMWAMVKQMTDVTLVPASDALKVRTNMEVRMEFVRHALHYLEQSYKNYTFVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPASVPGLQDGEVEGHPVWALIYYCMRCGDLTAAMHVVKRAQHQLGEFKTWFQEYMHSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDITDNQSEIADKTEDYLWLKLNQVCFDDGGASSPQDRLTLSQFQKQLLEDYGESHFAVNQPPFLYFQVLFLTAQFEAAIAFLFRTERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEVGDPPGVRRLNFARLLMLYTRKFESTDPREALQYFYFLRNEKDSQGENMFLRCVSEIVIESREFDMILGKLEKDGSRKPGVIDKFTSDTKSVINKVASAAENKGLFEEAAKLYDLAKNPDKVLELMNKLLSPVVPQISTPQSNKERLKNMAHSIAERYKAQGISAKKSIDSTFYLLLDLITFFDEYHAGHVDRAFDIIERLKLVPLSQDCVKERVAAFRNFSDEIKHNLSEVLLATMNILFTKYKRMKGTSPTTPARPQRVMEDRDSQLQSQARALIMFAGMIPYRTSGDTNARLVQMEILMN
SIO_010081: NUP93
subclass of: SO_0000673
so part of: NUP93
location: join(1246158..1246277,1251927..1252028,1252708..1252782,1254929..1255018,1256354..1256493,1258558..1258690,1259644..1259801,1261190..1261355,1262165..1262258,1263284..1263475,1263708..1263834,1263947..1264019,1264347..1264391,1265139..1265255,1265899..1266017,1267255..1267372,1267743..1267826,1268596..1268724,1273203..1273313)
location: region:1246158-1273313:1
so has part: feature:1246158-1246277:1:exon
so has part: feature:1251927-1252028:1:exon
so has part: feature:1252708-1252782:1:exon
so has part: feature:1254929-1255018:1:exon
so has part: feature:1256354-1256493:1:exon
so has part: feature:1258558-1258690:1:exon
so has part: feature:1259644-1259801:1:exon
so has part: feature:1261190-1261355:1:exon
so has part: feature:1262165-1262258:1:exon
so has part: feature:1263284-1263475:1:exon
so has part: feature:1263708-1263834:1:exon
so has part: feature:1263947-1264019:1:exon
so has part: feature:1264347-1264391:1:exon
so has part: feature:1265139-1265255:1:exon
so has part: feature:1265899-1266017:1:exon
so has part: feature:1267255-1267372:1:exon
so has part: feature:1267743-1267826:1:exon
so has part: feature:1268596-1268724:1:exon
so has part: feature:1273203-1273313:1:exon

XP_032557251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1246158-1246277:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1251927-1252028:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1252708-1252782:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1254929-1255018:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1256354-1256493:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1258558-1258690:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1259644-1259801:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1261190-1261355:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1262165-1262258:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1263284-1263475:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1263708-1263834:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1263947-1264019:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1264347-1264391:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1265139-1265255:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1265899-1266017:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1267255-1267372:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1267743-1267826:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1268596-1268724:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1273203-1273313:1:exon

NUP93
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: NUP93
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear pore complex protein Nup93 isoform X3
translation: MAEEYHRESMLVEWEQVKQRILHSLLASGEDALDFTQENESAEHPCSVVAVLRTYQCFVMKTYKNSFMQNWTILPSYVGEVGPPGRSSLDSVEMAYARQIYIYNEKIVNGHLQPNLVDLCAATAGLDDKNISEMWAMVKQMTDVTLVPASDALKVRTNMEVRMEFVRHALHYLEQSYKNYTFVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPASVPGLQDGEVEGHPVWALIYYCMRCGDLTAAMHVVKRAQHQLGEFKTWFQEYMHSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDITDNQSEIADKTEDYLWLKLNQVCFDDGGASSPQDRLTLSQFQKQLLEDYGESHFAVNQPPFLYFQVLFLTAQFEAAIAFLFRTERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEVGDPPGVRRLNFARLLMLYTRKFESTDPREALQYFYFLRNEKDSQGENMFLRCVSEIVIESREFDMILGKLEKDGSRKPGVIDKFTSDTKSVINKVASAAENKGLFEEAAKLYDLAKNPDKVLELMNKLLSPVVPQISTPQSNKERLKNMAHSIAERYKAQGISAKKSIDSTFYLLLDLITFFDEYHAGHVDRAFDIIERLKLVPLSQDCVKERVAAFRNFSDEIKHNLSEVLLATMNILFTKYKRMKGTSPTTPARPQRVMEDRDSQLQSQARALIMFAGMIPYRTSGDTNARLVQMEILMN
SIO_010081: NUP93
subclass of: SO_0000673
so part of: NUP93
location: join(1246158..1246277,1251927..1252028,1252708..1252782,1254929..1255018,1256354..1256493,1258558..1258690,1259644..1259801,1261190..1261355,1262165..1262258,1263284..1263475,1263708..1263834,1263947..1264019,1264347..1264391,1265139..1265255,1265899..1266017,1267255..1267372,1267743..1267826,1268596..1268724,1273203..1273313)
location: region:1246158-1273313:1
so has part: feature:1246158-1246277:1:exon
so has part: feature:1251927-1252028:1:exon
so has part: feature:1252708-1252782:1:exon
so has part: feature:1254929-1255018:1:exon
so has part: feature:1256354-1256493:1:exon
so has part: feature:1258558-1258690:1:exon
so has part: feature:1259644-1259801:1:exon
so has part: feature:1261190-1261355:1:exon
so has part: feature:1262165-1262258:1:exon
so has part: feature:1263284-1263475:1:exon
so has part: feature:1263708-1263834:1:exon
so has part: feature:1263947-1264019:1:exon
so has part: feature:1264347-1264391:1:exon
so has part: feature:1265139-1265255:1:exon
so has part: feature:1265899-1266017:1:exon
so has part: feature:1267255-1267372:1:exon
so has part: feature:1267743-1267826:1:exon
so has part: feature:1268596-1268724:1:exon
so has part: feature:1273203-1273313:1:exon

XP_032557252.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1246158-1246277:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1251927-1252028:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1252708-1252782:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1254929-1255018:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1256354-1256493:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1258558-1258690:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1259644-1259801:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1261190-1261355:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1262165-1262258:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1263284-1263475:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1263708-1263834:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1263947-1264019:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1264347-1264391:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1265139-1265255:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1265899-1266017:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1267255-1267372:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1267743-1267826:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1268596-1268724:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1273203-1273313:1:exon

SLC12A3
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: SLC12A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1279330..1287839
location: region:1279330-1287839:1
so has part: feature:1279330-1287839:1:exon
subclass of: SO_0000010

116793273
type: Gene
SIO_000068: ncbigene

position:1279330:1
position: 1279330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1287839:1
position: 1287839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1279330-1287839:1:exon

SLC12A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SLC12A3
product: solute carrier family 12 member 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032701000.1
SIO_010081: SLC12A3
subclass of: SO_0000673
so part of: SLC12A3
location: join(1279330..1279648,1279902..1280057,1280284..1280359,1280548..1280643,1280798..1280937,1281136..1281246,1281435..1281546,1281783..1281913,1282166..1282250,1282594..1282748,1283069..1283176,1283336..1283459,1283550..1283651,1283742..1283897,1283969..1284068,1284489..1284600,1285147..1285287,1285465..1285571,1285718..1285800,1285943..1286011,1286207..1286308,1286507..1286618,1286902..1286988,1287076..1287211,1287325..1287392,1287698..1287839)
location: region:1279330-1287839:1
so has part: feature:1279330-1279648:1:exon
so has part: feature:1279902-1280057:1:exon
so has part: feature:1280284-1280359:1:exon
so has part: feature:1280548-1280643:1:exon
so has part: feature:1280798-1280937:1:exon
so has part: feature:1281136-1281246:1:exon
so has part: feature:1281435-1281546:1:exon
so has part: feature:1281783-1281913:1:exon
so has part: feature:1282166-1282250:1:exon
so has part: feature:1282594-1282748:1:exon
so has part: feature:1283069-1283176:1:exon
so has part: feature:1283336-1283459:1:exon
so has part: feature:1283550-1283651:1:exon
so has part: feature:1283742-1283897:1:exon
so has part: feature:1283969-1284068:1:exon
so has part: feature:1284489-1284600:1:exon
so has part: feature:1285147-1285287:1:exon
so has part: feature:1285465-1285571:1:exon
so has part: feature:1285718-1285800:1:exon
so has part: feature:1285943-1286011:1:exon
so has part: feature:1286207-1286308:1:exon
so has part: feature:1286507-1286618:1:exon
so has part: feature:1286902-1286988:1:exon
so has part: feature:1287076-1287211:1:exon
so has part: feature:1287325-1287392:1:exon
so has part: feature:1287698-1287839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1279330-1279648:1:exon

position:1279648:1
position: 1279648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1279902-1280057:1:exon

position:1279902:1
position: 1279902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1280057:1
position: 1280057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1280284-1280359:1:exon

position:1280284:1
position: 1280284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1280359:1
position: 1280359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1280548-1280643:1:exon

position:1280548:1
position: 1280548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1280643:1
position: 1280643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1280798-1280937:1:exon

position:1280798:1
position: 1280798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1280937:1
position: 1280937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1281136-1281246:1:exon

position:1281136:1
position: 1281136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1281246:1
position: 1281246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1281435-1281546:1:exon

position:1281435:1
position: 1281435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1281546:1
position: 1281546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1281783-1281913:1:exon

position:1281783:1
position: 1281783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1281913:1
position: 1281913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1282166-1282250:1:exon

position:1282166:1
position: 1282166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1282250:1
position: 1282250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1282594-1282748:1:exon

position:1282594:1
position: 1282594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1282748:1
position: 1282748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1283069-1283176:1:exon

position:1283069:1
position: 1283069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1283176:1
position: 1283176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1283336-1283459:1:exon

position:1283336:1
position: 1283336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1283459:1
position: 1283459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1283550-1283651:1:exon

position:1283550:1
position: 1283550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1283651:1
position: 1283651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1283742-1283897:1:exon

position:1283742:1
position: 1283742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1283897:1
position: 1283897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1283969-1284068:1:exon

position:1283969:1
position: 1283969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1284068:1
position: 1284068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1284489-1284600:1:exon

position:1284489:1
position: 1284489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1284600:1
position: 1284600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1285147-1285287:1:exon

position:1285147:1
position: 1285147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1285287:1
position: 1285287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1285465-1285571:1:exon

position:1285465:1
position: 1285465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1285571:1
position: 1285571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1285718-1285800:1:exon

position:1285718:1
position: 1285718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1285800:1
position: 1285800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1285943-1286011:1:exon

position:1285943:1
position: 1285943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1286011:1
position: 1286011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1286207-1286308:1:exon

position:1286207:1
position: 1286207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1286308:1
position: 1286308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1286507-1286618:1:exon

position:1286507:1
position: 1286507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1286618:1
position: 1286618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1286902-1286988:1:exon

position:1286902:1
position: 1286902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1286988:1
position: 1286988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1287076-1287211:1:exon

position:1287076:1
position: 1287076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1287211:1
position: 1287211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1287325-1287392:1:exon

position:1287325:1
position: 1287325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1287392:1
position: 1287392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1287698-1287839:1:exon

position:1287698:1
position: 1287698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC12A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: SLC12A3
product: solute carrier family 12 member 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 4 long SRA reads, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032700999.1
SIO_010081: SLC12A3
subclass of: SO_0000673
so part of: SLC12A3
location: join(1279358..1279648,1279902..1280057,1280284..1280359,1280548..1280643,1280798..1280937,1281136..1281246,1281435..1281546,1281783..1281913,1282166..1282250,1282594..1282748,1283069..1283176,1283336..1283459,1283550..1283651,1283742..1283897,1283969..1284068,1284489..1284600,1285147..1285287,1285465..1285571,1285718..1285800,1285943..1286011,1286207..1286308,1286507..1286618,1286902..1286988,1287076..1287211,1287325..1287392,1287680..1287839)
location: region:1279358-1287839:1
so has part: feature:1279358-1279648:1:exon
so has part: feature:1279902-1280057:1:exon
so has part: feature:1280284-1280359:1:exon
so has part: feature:1280548-1280643:1:exon
so has part: feature:1280798-1280937:1:exon
so has part: feature:1281136-1281246:1:exon
so has part: feature:1281435-1281546:1:exon
so has part: feature:1281783-1281913:1:exon
so has part: feature:1282166-1282250:1:exon
so has part: feature:1282594-1282748:1:exon
so has part: feature:1283069-1283176:1:exon
so has part: feature:1283336-1283459:1:exon
so has part: feature:1283550-1283651:1:exon
so has part: feature:1283742-1283897:1:exon
so has part: feature:1283969-1284068:1:exon
so has part: feature:1284489-1284600:1:exon
so has part: feature:1285147-1285287:1:exon
so has part: feature:1285465-1285571:1:exon
so has part: feature:1285718-1285800:1:exon
so has part: feature:1285943-1286011:1:exon
so has part: feature:1286207-1286308:1:exon
so has part: feature:1286507-1286618:1:exon
so has part: feature:1286902-1286988:1:exon
so has part: feature:1287076-1287211:1:exon
so has part: feature:1287325-1287392:1:exon
so has part: feature:1287680-1287839:1:exon

position:1279358:1
position: 1279358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1279358-1279648:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1279902-1280057:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1280284-1280359:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1280548-1280643:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1280798-1280937:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1281136-1281246:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1281435-1281546:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1281783-1281913:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1282166-1282250:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1282594-1282748:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1283069-1283176:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1283336-1283459:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1283550-1283651:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1283742-1283897:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1283969-1284068:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1284489-1284600:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1285147-1285287:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1285465-1285571:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1285718-1285800:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1285943-1286011:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1286207-1286308:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1286507-1286618:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1286902-1286988:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1287076-1287211:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1287325-1287392:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1287680-1287839:1:exon

position:1287680:1
position: 1287680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC12A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SLC12A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 12 member 3 isoform X1
translation: MAELPTPDLPPARCSGRFTISTLLAMEEGARGPFAPAEGPGCDSAQPSLCGSTLCTRTFGYNTVDVVPAYEHYANSKGVGDPGKGRPTLADLHSILKPDPGRLHPVCDPQWSNGLPEAGPEPGLAEAEGEPGRASEQEPVRFGWVKGVMIRCMLNIWGVILYLRLPWITAQAGIALTWLIILMSVTVTTITGLSISAISTNGKVKSGGTYFLISRSLGPELGGSIGLIFAFANAVAVAMHTVGFAETVRDLLQEHNSLIVDPTNDIRIIGVITVTVLLGISLAGMEWEAKAQILFFLVILVSFINYLVGTVIPATAEKQSKGFFSYRADIFAQNFVPNWRGPDGSFFGLFSIFFPSATGILAGANISGDLKDPAVAIPKGTLMAIFWTTVSYLVLSATIGACVVRDASGSLNDSVAMGSLGCEGLACGYGWNFTACAQRQSCRYGLSNYYQSMSMVSGFGPLITAGIFGATLSSALACLVSAPKVFQCLCRDQLYPLIGFFGKGYGRNSEPLRGYMLTYVIAIGFILIAELNAIAPIISNFFLCSYALINFSCFHASITNSPGWRPSFRYYSKWAALFGATVSVVIMFLLTWWAALIAFGIVIFLLGYVLYKKPDVNWGSSMQASSYNMALNYSVGLSEVDEHIKNYRPQCLVLTGPPNFRPALVDFVGTFTKNLSLMLCGNVLIGPRKQKMPESRLTADGHAKWLMKRKIKAFYTDVVAEDLRSGVQMLLQAAGLGKMRPNILVLGYKRDWRTASPQSLEDYVGILHDAFDFKYGVCLMRMKEGLNVSRVLQAHVNPTFEAAEHPENGTGSRAAPNTVDCTALAGEQQASTVFQSQQGKKTIDIYWLFDDGGLTLLIPYLLGRKKRWGKCKIRVFVGGQINRMDEERKAIVSLLSKFRLGFHEIHILPDINQKPRPEHIKRFDDLIAPFRLNDGFKDEATVNEMRQGCPWKISDEEVDKNRAKSLRQVRLNEILLDYSRDAALIAITPPIGRKGRCPSALYMAWLETLSQDLRPPVILTRGNQENVLTFYCQ
SIO_010081: SLC12A3
subclass of: SO_0000673
so part of: SLC12A3
location: join(1279358..1279648,1279902..1280057,1280284..1280359,1280548..1280643,1280798..1280937,1281136..1281246,1281435..1281546,1281783..1281913,1282166..1282250,1282594..1282748,1283069..1283176,1283336..1283459,1283550..1283651,1283742..1283897,1283969..1284068,1284489..1284600,1285147..1285287,1285465..1285571,1285718..1285800,1285943..1286011,1286207..1286308,1286507..1286618,1286902..1286988,1287076..1287211,1287325..1287392,1287680..1287821)
location: region:1279358-1287821:1
so has part: feature:1279358-1279648:1:exon
so has part: feature:1279902-1280057:1:exon
so has part: feature:1280284-1280359:1:exon
so has part: feature:1280548-1280643:1:exon
so has part: feature:1280798-1280937:1:exon
so has part: feature:1281136-1281246:1:exon
so has part: feature:1281435-1281546:1:exon
so has part: feature:1281783-1281913:1:exon
so has part: feature:1282166-1282250:1:exon
so has part: feature:1282594-1282748:1:exon
so has part: feature:1283069-1283176:1:exon
so has part: feature:1283336-1283459:1:exon
so has part: feature:1283550-1283651:1:exon
so has part: feature:1283742-1283897:1:exon
so has part: feature:1283969-1284068:1:exon
so has part: feature:1284489-1284600:1:exon
so has part: feature:1285147-1285287:1:exon
so has part: feature:1285465-1285571:1:exon
so has part: feature:1285718-1285800:1:exon
so has part: feature:1285943-1286011:1:exon
so has part: feature:1286207-1286308:1:exon
so has part: feature:1286507-1286618:1:exon
so has part: feature:1286902-1286988:1:exon
so has part: feature:1287076-1287211:1:exon
so has part: feature:1287325-1287392:1:exon
so has part: feature:1287680-1287821:1:exon

XP_032556890.1
type: Protein
SIO_000068: ncbiprotein

position:1287821:1
position: 1287821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1279358-1279648:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1279902-1280057:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1280284-1280359:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1280548-1280643:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1280798-1280937:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1281136-1281246:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1281435-1281546:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1281783-1281913:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1282166-1282250:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1282594-1282748:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1283069-1283176:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1283336-1283459:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1283550-1283651:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1283742-1283897:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1283969-1284068:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1284489-1284600:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1285147-1285287:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1285465-1285571:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1285718-1285800:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1285943-1286011:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1286207-1286308:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1286507-1286618:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1286902-1286988:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1287076-1287211:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1287325-1287392:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1287680-1287821:1:exon

SLC12A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: SLC12A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 12 member 3 isoform X2
translation: MAELPTPDLPPARCSGRFTISTLLAMEEGARGPFAPAEGPGCDSAQPSLCGSTLCTRTFGYNTVDVVPAYEHYANSKGVGDPGKGRPTLADLHSILKPDPGRLHPVCDPQWSNGLPEAGPEPGLAEAEGEPGRASEQEPVRFGWVKGVMIRCMLNIWGVILYLRLPWITAQAGIALTWLIILMSVTVTTITGLSISAISTNGKVKSGGTYFLISRSLGPELGGSIGLIFAFANAVAVAMHTVGFAETVRDLLQEHNSLIVDPTNDIRIIGVITVTVLLGISLAGMEWEAKAQILFFLVILVSFINYLVGTVIPATAEKQSKGFFSYRADIFAQNFVPNWRGPDGSFFGLFSIFFPSATGILAGANISGDLKDPAVAIPKGTLMAIFWTTVSYLVLSATIGACVVRDASGSLNDSVAMGSLGCEGLACGYGWNFTACAQRQSCRYGLSNYYQSMSMVSGFGPLITAGIFGATLSSALACLVSAPKVFQCLCRDQLYPLIGFFGKGYGRNSEPLRGYMLTYVIAIGFILIAELNAIAPIISNFFLCSYALINFSCFHASITNSPGWRPSFRYYSKWAALFGATVSVVIMFLLTWWAALIAFGIVIFLLGYVLYKKPDVNWGSSMQASSYNMALNYSVGLSEVDEHIKNYRPQCLVLTGPPNFRPALVDFVGTFTKNLSLMLCGNVLIGPRKQKMPESRLTADGHAKWLMKRKIKAFYTDVVAEDLRSGVQMLLQAAGLGKMRPNILVLGYKRDWRTASPQSLEDYVGILHDAFDFKYGVCLMRMKEGLNVSRVLQAHVNPTFEAAEHPENGTGSRAAPNTVDCTALAGEQQASTVFQSQQGKKTIDIYWLFDDGGLTLLIPYLLGRKKRWGKCKIRVFVGGQINRMDEERKAIVSLLSKFRLGFHEIHILPDINQKPRPEHIKRFDDLIAPFRLNDGFKDEATVNEMRQGCPWKISDEEVDKNRAKSLRQVRLNEILLDYSRDAALIAMKGRCPSALYMAWLETLSQDLRPPVILTRGNQENVLTFYCQ
SIO_010081: SLC12A3
subclass of: SO_0000673
so part of: SLC12A3
location: join(1279358..1279648,1279902..1280057,1280284..1280359,1280548..1280643,1280798..1280937,1281136..1281246,1281435..1281546,1281783..1281913,1282166..1282250,1282594..1282748,1283069..1283176,1283336..1283459,1283550..1283651,1283742..1283897,1283969..1284068,1284489..1284600,1285147..1285287,1285465..1285571,1285718..1285800,1285943..1286011,1286207..1286308,1286507..1286618,1286902..1286988,1287076..1287211,1287325..1287392,1287698..1287821)
location: region:1279358-1287821:1
so has part: feature:1279358-1279648:1:exon
so has part: feature:1279902-1280057:1:exon
so has part: feature:1280284-1280359:1:exon
so has part: feature:1280548-1280643:1:exon
so has part: feature:1280798-1280937:1:exon
so has part: feature:1281136-1281246:1:exon
so has part: feature:1281435-1281546:1:exon
so has part: feature:1281783-1281913:1:exon
so has part: feature:1282166-1282250:1:exon
so has part: feature:1282594-1282748:1:exon
so has part: feature:1283069-1283176:1:exon
so has part: feature:1283336-1283459:1:exon
so has part: feature:1283550-1283651:1:exon
so has part: feature:1283742-1283897:1:exon
so has part: feature:1283969-1284068:1:exon
so has part: feature:1284489-1284600:1:exon
so has part: feature:1285147-1285287:1:exon
so has part: feature:1285465-1285571:1:exon
so has part: feature:1285718-1285800:1:exon
so has part: feature:1285943-1286011:1:exon
so has part: feature:1286207-1286308:1:exon
so has part: feature:1286507-1286618:1:exon
so has part: feature:1286902-1286988:1:exon
so has part: feature:1287076-1287211:1:exon
so has part: feature:1287325-1287392:1:exon
so has part: feature:1287698-1287821:1:exon

XP_032556891.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1279358-1279648:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1279902-1280057:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1280284-1280359:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1280548-1280643:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1280798-1280937:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1281136-1281246:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1281435-1281546:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1281783-1281913:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1282166-1282250:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1282594-1282748:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1283069-1283176:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1283336-1283459:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1283550-1283651:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1283742-1283897:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1283969-1284068:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1284489-1284600:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1285147-1285287:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1285465-1285571:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1285718-1285800:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1285943-1286011:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1286207-1286308:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1286507-1286618:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1286902-1286988:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1287076-1287211:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1287325-1287392:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1287698-1287821:1:exon

TMEM170A
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: TMEM170A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1288233..1291704)
location: region:1288233-1291704:-1
so has part: feature:1288233-1291704:-1:exon
subclass of: SO_0000010

116793275
type: Gene
SIO_000068: ncbigene

position:1288233:-1
position: 1288233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1291704:-1
position: 1291704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1288233-1291704:-1:exon

TMEM170A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: TMEM170A
product: transmembrane protein 170A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_032701002.1
SIO_010081: TMEM170A
subclass of: SO_0000673
so part of: TMEM170A
location: complement(join(1288233..1291038,1291275..1291445,1291547..1291704))
location: region:1288233-1291704:-1
so has part: feature:1291547-1291704:-1:exon
so has part: feature:1291275-1291445:-1:exon
so has part: feature:1288233-1291038:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1291547-1291704:-1:exon

position:1291547:-1
position: 1291547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1291275-1291445:-1:exon

position:1291275:-1
position: 1291275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1291445:-1
position: 1291445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1288233-1291038:-1:exon

position:1291038:-1
position: 1291038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM170A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 296741
gene: TMEM170A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 170A
translation: MEGGDAGGGGLLQQILSLRLVPRVGNGTTTYSSPLSTFPEMWYGVFLWAIVSSLAFHVPAALLALFTLRHHKYGRFMSVSVLLMGIVGPITAGTLTSAAFAGVYRAAGKKMIPFEALIFGVGQTFCVVVVSFLRILATL
SIO_010081: TMEM170A
subclass of: SO_0000673
so part of: TMEM170A
location: complement(join(1290908..1291038,1291275..1291445,1291547..1291664))
location: region:1290908-1291664:-1
so has part: feature:1291547-1291664:-1:exon
so has part: feature:1291275-1291445:-1:exon
so has part: feature:1290908-1291038:-1:exon

XP_032556893.1
type: Protein
SIO_000068: ncbiprotein

position:1290908:-1
position: 1290908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1291664:-1
position: 1291664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1291547-1291664:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1291275-1291445:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1290908-1291038:-1:exon

CFDP1
type: Gene
subclass of: SO_0000704
RO_0002162: 296741
gene: CFDP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1291983..1353854
location: region:1291983-1353854:1
so has part: feature:1291983-1353854:1:exon
subclass of: SO_0000010

116793274
type: Gene
SIO_000068: ncbigene

position:1291983:1
position: 1291983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1353854:1
position: 1353854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1291983-1353854:1:exon

CFDP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 296741
gene: CFDP1
product: craniofacial development protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 8 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_032701001.1
SIO_010081: CFDP1
subclass of: SO_0000673
so part of: CFDP1
location: join(1291983..1292125,1292200..1292308,1293038..1293257,1294965..1295065,1310194..1310298,1347991..1348149,1353108..1353854)
location: region:1291983-1353854:1
so has part: feature:1291983-1292125:1:exon
so has part: feature:1292200-1292308:1:exon
so has part: feature:1293038-1293257:1:exon
so has part: feature:1294965-1295065:1:exon
so has part: feature:1310194-1310298:1:exon
so has part: feature:1347991-1348149:1:exon
so has part: feature:1353108-1353854:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1291983-1292125:1:exon

position:1292125:1
position: 1292125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1292200-1292308:1:exon

position:1292200:1
position: 1292200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1292308:1
position: 1292308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1293038-1293257:1:exon

position:1293038:1
position: 1293038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1293257:1
position: 1293257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1294965-1295065:1:exon

position:1294965:1
position: 1294965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1295065:1
position: 1295065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1310194-1310298:1:exon