Bartonella harrusi strain 117A plasmid pBHa, complete sequence.
type: Entry
definition: Bartonella harrusi strain 117A plasmid pBHa, complete sequence.
sequence version: NZ_CP101113.1
sequence date: 2022-08-29
sequence: sequence
division: CON
label: NZ_CP101113.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN29470399
keyword: RefSeq
source: Bartonella harrusi
organism: Bartonella harrusi
taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales; Bartonellaceae; Bartonella.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP101113.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 14-MAR-2022\nAssembly Method :: MaSuRCA v. v. 3.2.4\nAssembly Name :: BatHar\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 43.0x\nSequencing Technology :: Illumina NovaSeq; Oxford Nanopore MinION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 08/29/2022 16:39:02\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.2\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 2,095\nCDSs (total) :: 2,043\nGenes (coding) :: 1,824\nCDSs (with protein) :: 1,824\nGenes (RNA) :: 52\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 42\nncRNAs :: 4\nPseudo Genes (total) :: 219\nCDSs (without protein) :: 219\nPseudo Genes (ambiguous residues) :: 1 of 219\nPseudo Genes (frameshifted) :: 144 of 219\nPseudo Genes (incomplete) :: 124 of 219\nPseudo Genes (internal stop) :: 69 of 219\nPseudo Genes (multiple problems) :: 87 of 219\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 29892
topology: circular
so has quality: SO_0000988
location: 1..29892
location: region:1-29892:1
RO_0002162: 2961895

NZ_CP101113
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN29470399
type: BioSample
SIO_000068: biosample

1
title: First report of Bartonella spp. in marsupials in Brazil, with a description of Bartonella harrusi sp. nov. and new proposal for taxonomic reclassification of species of the genus Bartonella
author: Amaral, R.B.
journal: Unpublished

2
title: Direct Submission
author: Amaral, R.B.
journal: Submitted (08-JUL-2022) Veterinary Pathology, School of Agricultural and Veterinarian Sciences (FCAV), Via de Acesso Prof. Paulo Donato Castellane, Jaboticabal, Sao Paulo 14884-900, Brazil

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29892:1
position: 29892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-29892:1:source
so part of: sequence
organism: Bartonella harrusi
mol type: genomic DNA
strain: 117A
isolation source: blood
host: Thylamys macrura
type material: type strain of Bartonella harrusi
plasmid: pBHa
country: Brazil
lat lon: 18.787912 S 56.158556 W
collection date: 2018-12-14
collected by: Renan Amaral

2961895
type: Taxonomy
SIO_000068: taxonomy

NMK50_RS00005
type: Gene
subclass of: SO_0000704
RO_0002162: 2961895
locus tag: NMK50_RS00005
old locus tag: NMK50_00005
so part of: sequence
location: complement(join(29747..29892,1..535))
location: region:1-29892:-1
so has part: feature:1-535:-1:exon
so has part: feature:29747-29892:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29892:-1
position: 29892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-535:-1:exon

position:535:-1
position: 535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:29747-29892:-1:exon

position:29747:-1
position: 29747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NMK50_RS00005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2961895
locus tag: NMK50_RS00005
old locus tag: NMK50_00005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007478103.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MPTIVFCSTKGGVGKSTSALVLSQVLAQHGSKVKIIDTDPNQPIADEWWKNASPHYPLNIDVQGGVNENTIIDVIDEAANKHSFVIVDLEGSANITASYAISRSDMVIIPMAGTKLDSREAAKVISFIAREGKARRSDIPYRIMFSKCSVIQTREEKEIRKELIEAKLPVLAHGMMNKAAFSSIFGFGCTLYQLNKQDVSNAESAIDNAEQVATDIVQALKLEGVM
SIO_010081: NMK50_RS00005
subclass of: SO_0000673
so part of: NMK50_RS00005
location: complement(join(29747..29892,1..535))
location: region:1-29892:-1
so has part: feature:1-535:-1:exon
so has part: feature:29747-29892:-1:exon

WP_254769582.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-535:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29747-29892:-1:exon

NMK50_RS00010
type: Gene
subclass of: SO_0000704
RO_0002162: 2961895
locus tag: NMK50_RS00010
old locus tag: NMK50_00010
so part of: sequence
location: complement(721..1524)
location: region:721-1524:-1
so has part: feature:721-1524:-1:exon
subclass of: SO_0000010

position:721:-1
position: 721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1524:-1
position: 1524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:721-1524:-1:exon

NMK50_RS00010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2961895
locus tag: NMK50_RS00010
old locus tag: NMK50_00010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015125203.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA adenine methylase
translation: MSLEKHRDLSEKTIQKSPLRYPGGKSRSVTLIVDNYIKKQKTLCSPFVGGGSIELTLAKRGTKVYAYDAFKPLVIFWQMLLKDASALAKKVREYEDMTPTIFYNLQKKFRNIRNRLEIAAAFFALNRSSFSGTTLSGGMSPGHPRFNQRSIERLRDFEIENFTVEHLDFKESIPRHSNDFLYCDPPYLINQKLYGEKGDKHNSFDHKALAELLRNRQGWVLSYNNCVEVRELYKGHIIINPEWTYGMGNNKKSNELLILSKDFLGIV
SIO_010081: NMK50_RS00010
subclass of: SO_0000673
so part of: NMK50_RS00010
location: complement(721..1524)
location: region:721-1524:-1
so has part: feature:721-1524:-1:exon

WP_256481335.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:721-1524:-1:exon

NMK50_RS00015
type: Gene
subclass of: SO_0000704
RO_0002162: 2961895
locus tag: NMK50_RS00015
old locus tag: NMK50_00015
so part of: sequence
location: complement(1624..2922)
location: region:1624-2922:-1
so has part: feature:1624-2922:-1:exon
subclass of: SO_0000010

position:1624:-1
position: 1624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2922:-1
position: 2922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1624-2922:-1:exon

NMK50_RS00015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2961895
locus tag: NMK50_RS00015
old locus tag: NMK50_00015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005864504.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNNKNLNPSDSPDFFSVKTKGRGVRRLNNLPLVGAIGIISFALIGITYTFMLRQQSNDVAREEQKLLFVDETPLPVRPEGDDYVQAKLPEVSPIEPTKSTEIQKSVKKIPEQRQIDKIVDEEDEAQKRLLTRIEERRFAKMEAALDSEPTVSFTMDSMIKKQSQIQDNNPQKATLESLFGRSGGAPNTSFYNSDGGRDPNMQAQKIAFLSQSPEAEVYLKNTRQEAIQASLEVKAGTIIPGVMISGVNSDLPGQIIAQVRESVYDSATGQNVLIPMGSRLIGTYDSQVSTGQKRVLIAWSRVIYPDGSSLSLGNMPGSDQSGYAGFSDKVNNHYLKIFGNALMLSVISGASQLSQQTHKRGNEDSKLTTAKETLAAELGRQWGEVGIEMTRKNLNIQPTIIIRPGYNFNVMVTKDIILPSWQGHPMAALPY
SIO_010081: NMK50_RS00015
subclass of: SO_0000673
so part of: NMK50_RS00015
location: complement(1624..2922)
location: region:1624-2922:-1
so has part: feature:1624-2922:-1:exon

WP_254769584.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1624-2922:-1:exon

NMK50_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 2961895
locus tag: NMK50_RS00020
old locus tag: NMK50_00020
so part of: sequence
location: complement(2919..3380)
location: region:2919-3380:-1
so has part: feature:2919-3380:-1:exon
subclass of: SO_0000010

position:2919:-1
position: 2919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3380:-1
position: 3380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2919-3380:-1:exon

NMK50_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2961895
locus tag: NMK50_RS00020
old locus tag: NMK50_00020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007347980.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLKYLLFLPLMLIVGCASLSQKAPLFSNYIDQNITENDAKFIAGDFVRYLRDPLPPAATTLIVKTSDTEDKFTPLLIDLLQRNGYGVIYTDQPEKSQNTGINLTYKVMPMYKGLVFVAQYGSSEITRYYVRLTTGNIVPSAPFSVRIDDGGNG
SIO_010081: NMK50_RS00020
subclass of: SO_0000673
so part of: NMK50_RS00020
location: complement(2919..3380)
location: region:2919-3380:-1
so has part: feature:2919-3380:-1:exon

WP_254769585.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2919-3380:-1:exon

NMK50_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 2961895
gene: trbG
locus tag: NMK50_RS00025
old locus tag: NMK50_00025
so part of: sequence
location: complement(3382..4272)
location: region:3382-4272:-1
so has part: feature:3382-4272:-1:exon
subclass of: SO_0000010

position:3382:-1
position: 3382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4272:-1
position: 4272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3382-4272:-1:exon

NMK50_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2961895
gene: trbG
locus tag: NMK50_RS00025
old locus tag: NMK50_00025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007347979.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbG
translation: MFKKNIKNIFVGVAVLVTSTAMATGVSQTVNFISPQKIYLTGKEVWGLKLANEWKNNPAKPIRSSDGSVKYLYGATLPTLVCTPLEVCTIQLQAGETINSLHAGDTARWKISPSISGTGTAETTYIVVKPTDAGLTTNLFITTDRRTYMIKLASTQNSSIPVLSFVYPDDTDQDWAAYKTATDRRRTMLPTGQNLAALDFNFRITISDPKIKWYPRRVYTDGLKTYIELPGNGVSGTAPALIALGDDGGFFKKPSEKLINYRIIGNRYVVDTVISKVALISGVGSSQQRVTIIRGL
SIO_010081: NMK50_RS00025
subclass of: SO_0000673
so part of: NMK50_RS00025
location: complement(3382..4272)
location: region:3382-4272:-1
so has part: feature:3382-4272:-1:exon

WP_254769586.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3382-4272:-1:exon

NMK50_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 2961895
gene: trbF
locus tag: NMK50_RS00030
old locus tag: NMK50_00030
so part of: sequence
location: complement(4306..4983)
location: region:4306-4983:-1
so has part: feature:4306-4983:-1:exon
subclass of: SO_0000010

position:4306:-1
position: 4306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4983:-1
position: 4983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4306-4983:-1:exon

NMK50_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2961895
gene: trbF
locus tag: NMK50_RS00030
old locus tag: NMK50_00030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007347978.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbF
translation: MSTTEDSVKNKPSNPYISARKEWMERYGDYVHAANNWRLATFGMIIITAVSVGAFIWKANEQTVVPYIVQTNSVGEVTHLSKANIASKPNTTHIRAALRNWLIGARTVYVDMRAEQDLINQTYSMTLPQSPAFSMLVEYHKQNDPYSRAANETVEVQVNAIVPVSNDTWQIEWTEKTRTRTGAIINTKLWQASATVILATPRTEQQMMINPIGLYVKQFSWTPRL
SIO_010081: NMK50_RS00030
subclass of: SO_0000673
so part of: NMK50_RS00030
location: complement(4306..4983)
location: region:4306-4983:-1
so has part: feature:4306-4983:-1:exon

WP_254769587.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4306-4983:-1:exon

NMK50_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 2961895
locus tag: NMK50_RS00035
old locus tag: NMK50_00035
so part of: sequence
location: complement(5141..7057)
location: region:5141-7057:-1
so has part: feature:5141-7057:-1:exon
subclass of: SO_0000010

position:5141:-1
position: 5141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7057:-1
position: 7057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5141-7057:-1:exon

NMK50_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2961895
locus tag: NMK50_RS00035
old locus tag: NMK50_00035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007347977.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: relaxase/mobilization nuclease domain-containing protein
translation: MIAKRVERKKATSNMARLARYIMDLDGGVFPRNWKLTSDYILDSNIQNSKKVASVRVTNCHTDDPVMATEFILKTQDQNKKSKSDKTYHLVLSFPAGETLEREILYEIEDKFCNALGYKDHQRISAIHKDTANLHVHIAINKINPENFRNYEPFFDKRTLMKTCQKIEQEYNLIKTPHGFEYKENQYSKYEIDDIENARQPKIKNFEYKTGIQSLSTYVRKITKEFDYTNWPELHKNLSDHGLIIKKQGNGLVIGIPDLDLWVKASSCDRGLSLSALEKKIGPYKSVKPIIHKQYVPIPHGKDSQTKTLLYSRYEEQKKASNIERQKRYQILRMQKIAFYNQLFVWYKQQCSLVKMAPKNSRAALRNTLKLQKKLRQQELKENQAVVKRKLAENKFPTWRDWLHQQANIGDKDAVNILHSMNERRAILSDNLLTTKTAKKTGVFLRKSLKPSFLKNGNILYKSMDGGTIIDAGEKIHAQKFTTGSAYIALSLAVEKFKDQPLVLNGTDEFKKEVARLAGIHGMSVVFSDPILNTFKNEVEQQDKNNTNDSIQEWIAERNRYTENLPHVMWSDEEAVFNYVGRRKIREKNVLLFELNQKIFVKETSSRGFVQAGYWGKSAKVKITKNSVKKLSDKEIEA
SIO_010081: NMK50_RS00035
subclass of: SO_0000673
so part of: NMK50_RS00035
location: complement(5141..7057)
location: region:5141-7057:-1
so has part: feature:5141-7057:-1:exon

WP_254769588.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5141-7057:-1:exon

NMK50_RS00040
type: Gene
subclass of: SO_0000704
RO_0002162: 2961895
locus tag: NMK50_RS00040
old locus tag: NMK50_00040
so part of: sequence
location: complement(7054..7383)
location: region:7054-7383:-1
so has part: feature:7054-7383:-1:exon
subclass of: SO_0000010

position:7054:-1
position: 7054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7383:-1
position: 7383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7054-7383:-1:exon

NMK50_RS00040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2961895
locus tag: NMK50_RS00040
old locus tag: NMK50_00040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007347976.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraJ
translation: MTRPRKFRLSVWCTFEEKENIEENAKQTGLSISTYLRTTGQLEPVKANIDYEAIKDLTKLQGDLGRAAGLLKLWLVTNNGKGGVPSDINQMMVSFRELQKQIFEKISSL
SIO_010081: NMK50_RS00040
subclass of: SO_0000673
so part of: NMK50_RS00040
location: complement(7054..7383)
location: region:7054-7383:-1
so has part: feature:7054-7383:-1:exon

WP_254769589.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7054-7383:-1:exon

NMK50_RS00045
type: Gene
subclass of: SO_0000704
RO_0002162: 2961895
locus tag: NMK50_RS00045
old locus tag: NMK50_00045
so part of: sequence
location: 7619..7930
location: region:7619-7930:1
so has part: feature:7619-7930:1:exon
subclass of: SO_0000010

position:7619:1
position: 7619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7930:1
position: 7930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7619-7930:1:exon

NMK50_RS00045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2961895
locus tag: NMK50_RS00045
old locus tag: NMK50_00045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007347975.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraK family protein
translation: MKQKTEWGKMRIIFLANKNLIFKLIEEGYSLKEILRQNPNLNISYDALASYVRKYFKKNSANIPPSLPIKTQVKYPTSDDTIKTEQKSRVFEHDTNKKLEDMI
SIO_010081: NMK50_RS00045
subclass of: SO_0000673
so part of: NMK50_RS00045
location: 7619..7930
location: region:7619-7930:1
so has part: feature:7619-7930:1:exon

WP_254769590.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7619-7930:1:exon

NMK50_RS00050
type: Gene
subclass of: SO_0000704
RO_0002162: 2961895
locus tag: NMK50_RS00050
old locus tag: NMK50_00050
so part of: sequence
location: 7927..8652
location: region:7927-8652:1
so has part: feature:7927-8652:1:exon
subclass of: SO_0000010

position:7927:1
position: 7927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8652:1
position: 8652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7927-8652:1:exon

NMK50_RS00050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2961895
locus tag: NMK50_RS00050
old locus tag: NMK50_00050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007347974.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraL
translation: MTNIHMTLQGKGGVGKSFVASLVMQYLLENKIEVKGIDTDPVNQTFANYKNFNVKHLKLLEQSVVIPRNFDTLMEELLNSNCQYVIDNGATTFLPLAYYLKENEAFDILSAAKKNVIIHTIITGGQALADTLSGLFSICTQIPKTADIVVWKNEFFGPIKANEKSFEEMKVFQETKERISAIITIPQQTSSTFGEDIKTMLDKKLTFNEVTNSNEFSIMAKSRLARVKNILFEQISTIPGI
SIO_010081: NMK50_RS00050
subclass of: SO_0000673
so part of: NMK50_RS00050
location: 7927..8652
location: region:7927-8652:1
so has part: feature:7927-8652:1:exon

WP_254769591.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7927-8652:1:exon

NMK50_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 2961895
locus tag: NMK50_RS00055
old locus tag: NMK50_00055
so part of: sequence
location: 8654..8881
location: region:8654-8881:1
so has part: feature:8654-8881:1:exon
subclass of: SO_0000010

position:8654:1
position: 8654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8881:1
position: 8881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8654-8881:1:exon

NMK50_RS00055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2961895
locus tag: NMK50_RS00055
old locus tag: NMK50_00055
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVDIDAIRQKITKEFNQLIPPNDPVLITVFLSDIMLNSALKTLHDHQNQMISYILTARNAMVEEEKKNSWKINN
SIO_010081: NMK50_RS00055
subclass of: SO_0000673
so part of: NMK50_RS00055
location: 8654..8881
location: region:8654-8881:1
so has part: feature:8654-8881:1:exon

WP_254769592.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8654-8881:1:exon

NMK50_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 2961895
locus tag: NMK50_RS00060
old locus tag: NMK50_00060
so part of: sequence
location: complement(9228..9851)
location: region:9228-9851:-1
so has part: feature:9228-9851:-1:exon
subclass of: SO_0000010

position:9228:-1
position: 9228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9851:-1
position: 9851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9228-9851:-1:exon

NMK50_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2961895
locus tag: NMK50_RS00060
old locus tag: NMK50_00060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005773367.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKYEFTEETRKIEGVTLYRIRALKDFGNVKAGELGGFIEKEENLSHEGNCWVAGNALVLGEGRVYDNAQVCDNAAIAGHVYGNAYVCDKTRVYIHGRVYDNAHVYGNAKVLGSARIKPKAQVCDNAVICGAAKIYGKVYGNANVGCHTDVYGSVYGNAKISGYFTIRGRVYGNARLKRHSDLIFVSKNCEVYEGDTVVKIVENQAA
SIO_010081: NMK50_RS00060
subclass of: SO_0000673
so part of: NMK50_RS00060
location: complement(9228..9851)
location: region:9228-9851:-1
so has part: feature:9228-9851:-1:exon

WP_254769593.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9228-9851:-1:exon

NMK50_RS00065
type: Gene
subclass of: SO_0000704
RO_0002162: 2961895
locus tag: NMK50_RS00065
old locus tag: NMK50_00065
so part of: sequence
location: complement(10281..10547)
location: region:10281-10547:-1
so has part: feature:10281-10547:-1:exon
subclass of: SO_0000010

position:10281:-1
position: 10281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10547:-1
position: 10547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10281-10547:-1:exon

NMK50_RS00065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2961895
locus tag: NMK50_RS00065
old locus tag: NMK50_00065
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: DUF3574 domain-containing protein
translation: MLTTFSLKRLYMIIYHLATKLFYSEINHKIASLRYAFLMRGCPPLKLSGTLTKIMTPDPRFMRGLTILGSYGQGNPYRAPTGVLDKEP
SIO_010081: NMK50_RS00065
subclass of: SO_0000673
so part of: NMK50_RS00065
location: complement(10281..10547)
location: region:10281-10547:-1
so has part: feature:10281-10547:-1:exon

WP_254769594.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10281-10547:-1:exon

NMK50_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 2961895
gene: repC
locus tag: NMK50_RS00070
old locus tag: NMK50_00070
so part of: sequence
location: complement(10627..11985)
location: region:10627-11985:-1
so has part: feature:10627-11985:-1:exon
subclass of: SO_0000010

position:10627:-1
position: 10627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11985:-1
position: 11985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10627-11985:-1:exon

NMK50_RS00070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2961895
gene: repC
locus tag: NMK50_RS00070
old locus tag: NMK50_00070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019223216.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid replication protein RepC
translation: MVNKISGRRIDAHHIEYRKIADSAQMGFVSRGQLIGLAKNMKKTKLLKETEVELLLELLNTAPKASFEKGGVPLVFKSNRKLSSDINRSQSRVSYLLSRLYDNGLIVMRDSSNFKRYSVHSKDNEIACGIDLRILVARYDELKQKVDVVLKEKEKQEDALHYFRGLVRQIKDSYKEMKTTTSFTALLFARMQKIMDIIGRPAKASFEKLQKASHLLEWILQRGFKEKIEKTRYRHLADKIHIEHTTHNYKSNCNKKECSEKSEHTQINNMTFGHDKKAYENKQKGKTEGDLPSKESELLQIKPKFLAQALPNTARFLKHGLQSERDLIGSMELLAKMKGISPHALQEAKQTMGIKKTALAIALIVEKHCKEIIKSPGGYLRGMIAKENKGELYLERSFYALLDEEFKGKLHDFPIAENNKINSNDEKIPLFKSELNKVLKKLEMPKNHNKFA
SIO_010081: NMK50_RS00070
subclass of: SO_0000673
so part of: NMK50_RS00070
location: complement(10627..11985)
location: region:10627-11985:-1
so has part: feature:10627-11985:-1:exon

WP_254769595.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10627-11985:-1:exon

NMK50_RS00075
type: Gene
subclass of: SO_0000704
RO_0002162: 2961895
locus tag: NMK50_RS00075
old locus tag: NMK50_00075
so part of: sequence
location: complement(12290..12736)
location: region:12290-12736:-1
so has part: feature:12290-12736:-1:exon
subclass of: SO_0000010

position:12290:-1
position: 12290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12736:-1
position: 12736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12290-12736:-1:exon

NMK50_RS00075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2961895
locus tag: NMK50_RS00075
old locus tag: NMK50_00075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004861373.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTIVLPQMTVSISDKQRKQTVRYNQSPFVNDIVVSLEDPKEQIIVNIALIFDLKAAGIKVFMVLAWILQNKLIRTNAVLLDKAVLRTFLAAQERKLELSPTTFFRGIAELEKAGIIAKQDHRAWYFINPNFVFSNKPIVFTNDIKLEE
SIO_010081: NMK50_RS00075
subclass of: SO_0000673
so part of: NMK50_RS00075
location: complement(12290..12736)
location: region:12290-12736:-1
so has part: feature:12290-12736:-1:exon

WP_254769596.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12290-12736:-1:exon

NMK50_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 2961895
locus tag: NMK50_RS00080
old locus tag: NMK50_00080
so part of: sequence
location: 12841..13353
location: region:12841-13353:1
so has part: feature:12841-13353:1:exon
subclass of: SO_0000010

position:12841:1
position: 12841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13353:1
position: 13353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12841-13353:1:exon

NMK50_RS00080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2961895
locus tag: NMK50_RS00080
old locus tag: NMK50_00080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007478145.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKESKLQQDRYSPYENPFLNKHEIFSDNQVIKTHITQQKLLNPDTGKTEVVPTIHVIDKKDEQNFVKIYAAGIQAIFDLSRTGYRALILALQAYHTNQGKNDGSITLIWYDGGVNGKKLDMTDRTFYSGLKELTNKGILKPKLPNQYWVNPLLFFKGNQITFIKEYQTDL
SIO_010081: NMK50_RS00080
subclass of: SO_0000673
so part of: NMK50_RS00080
location: 12841..13353
location: region:12841-13353:1
so has part: feature:12841-13353:1:exon

WP_254769597.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12841-13353:1:exon

NMK50_RS00085
type: Gene
subclass of: SO_0000704
RO_0002162: 2961895
locus tag: NMK50_RS00085
old locus tag: NMK50_00085
so part of: sequence
location: 13804..14037
location: region:13804-14037:1
so has part: feature:13804-14037:1:exon
subclass of: SO_0000010

position:13804:1
position: 13804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14037:1
position: 14037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13804-14037:1:exon

NMK50_RS00085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2961895
locus tag: NMK50_RS00085
old locus tag: NMK50_00085
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006923559.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EexN family lipoprotein
translation: MKKIIFLCIAILFVAGCEKTYSVEEFKNNEKLRKEWGPKCLLGGVVKETKNCQNLLQADNEMFSSQEPVNSRPGAEF
SIO_010081: NMK50_RS00085
subclass of: SO_0000673
so part of: NMK50_RS00085
location: 13804..14037
location: region:13804-14037:1
so has part: feature:13804-14037:1:exon

WP_254769598.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13804-14037:1:exon

NMK50_RS00090
type: Gene
subclass of: SO_0000704
RO_0002162: 2961895
gene: trbL
locus tag: NMK50_RS00090
old locus tag: NMK50_00090
so part of: sequence
location: complement(14273..15730)
location: region:14273-15730:-1
so has part: feature:14273-15730:-1:exon
subclass of: SO_0000010

position:14273:-1
position: 14273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15730:-1
position: 15730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14273-15730:-1:exon

NMK50_RS00090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2961895
gene: trbL
locus tag: NMK50_RS00090
old locus tag: NMK50_00090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007347996.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbL
translation: MDNFKIRKDINFVTITLIFLSIYLIIFSNIAYAKPLETGETFVGLLDLIEKQANTWYFKLHEYAFRLFWLLATLQLLWTFIPLLFKQSDIAEFVGEFVKFILVIGFFAALLEYSRDWSTAIVNSLRTAAAHASGRTAALRPGDIFHQAVSLADTVVNVWNINPLVIVFKYFAALVVLLCFAFIGAFMAVTLVESYIVINASVLFMGFGSSQWTRDMTITAFRYAISVGAKLFILTLIVTLIIDSTETWKKAYEGTSASMWTLIGIALVCAYLSKTIPDIISGLITGSSSNGGSTIGSMASAAVGAAVGAAAALATGGTSAAASGAGEALGGVSGSMGGGMSGGGAMMGAGSGAGSGVGGMTGMSNSINASQMTGNSFKDSGGSSQISENPRVSGGKNNSAGTNQFNPQSTAQTMKGVANVGVKFAGTMASLCVPGMEGAENLSLNAPPTPPETEDTQFSMDVSQPNETETSDMNTISGASTEKAT
SIO_010081: NMK50_RS00090
subclass of: SO_0000673
so part of: NMK50_RS00090
location: complement(14273..15730)
location: region:14273-15730:-1
so has part: feature:14273-15730:-1:exon

WP_254769599.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14273-15730:-1:exon

NMK50_RS00095
type: Gene
subclass of: SO_0000704
RO_0002162: 2961895
gene: trbJ
locus tag: NMK50_RS00095
old locus tag: NMK50_00095
so part of: sequence
location: complement(15732..16487)
location: region:15732-16487:-1
so has part: feature:15732-16487:-1:exon
subclass of: SO_0000010

position:15732:-1
position: 15732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16487:-1
position: 16487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15732-16487:-1:exon

NMK50_RS00095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2961895
gene: trbJ
locus tag: NMK50_RS00095
old locus tag: NMK50_00095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007347995.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbJ
translation: MKNILKKLKSFSVVSAFCLVSFGSLFYSTNAFAFFCANCATVFNQMNQYVEAVNTQINTAKQLQTQLQQYKDMIKQGLSFSSPEFDGLQNTLQKLKQVYQDGQSISHSMGNLNSRFEQMFPGYENYLQNSGKVNPTKDYRKWAETGLSNSRVAIEAAGINISSFDNEDKLMQKLINRSASAEGRMQAIQAGNEIAAQQVKQLQLLRDLMANNTTLQANYTANEVERRAKDEADLEKFFSERPVNSRPGAEF
SIO_010081: NMK50_RS00095
subclass of: SO_0000673
so part of: NMK50_RS00095
location: complement(15732..16487)
location: region:15732-16487:-1
so has part: feature:15732-16487:-1:exon

WP_254769567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15732-16487:-1:exon

NMK50_RS00100
type: Gene
subclass of: SO_0000704
RO_0002162: 2961895
locus tag: NMK50_RS00100
old locus tag: NMK50_00100
so part of: sequence
location: complement(16462..18966)
location: region:16462-18966:-1
so has part: feature:16462-18966:-1:exon
subclass of: SO_0000010

position:16462:-1
position: 16462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18966:-1
position: 18966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16462-18966:-1:exon

NMK50_RS00100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2961895
locus tag: NMK50_RS00100
old locus tag: NMK50_00100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007347994.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transporter
translation: MLKLKHFRSTLAGLPDLLNFAALIDDGIVLGKDGSLLAGFFIRGDDPMSATDTERNYITGLVNTYLSRFHSGWAIWVDAIRIESPSYSDPKLSHFPDPITALIDAERRFYFQQSDVHYETEYALLIQYLPPTRKSSKLGEIVYEDDIVETTTPAERLLDEFKKKIEDFYVGLSDLLKMRRMKAITIKNSDETYESDQLINYLHYAINGEAVALRIPDCPMYLDSWLGYTDLWPGDTPRLGDKFITCISIDGFPAASYPGILDILDGLPLHYRWSSRFIFMDQHEAVAALNKYRLKWQQKVRGFFSQVFKTNKGTINTDALLMTQQAETAMNEARSGLVAYGYYSPTIILMHESREFLAENARFIKREIEHKGFAARIETVNTMEAWLGSIPGQTYPNIRRPLINTQNLADMLPLSSVWPGLQYNPCPLYPDNSPALSQVVTTGATPFRINLHVDDVGHTLVFGPTGAGKSTLLAFLLAQARRYWSKATDENGKHLPANITAFDKGRSLYTLCCAVNGRHYDIGESDGAIGALMPLADIDTEADNLWAQEWIATCYELQTGQAPSPQQKMEIHRAMKQMSQAPKNMRSLGNFVTTVQDKEIRQALMHYTLSGAMGHLLDGQEILEDNNDFIVYEIDELMKLGDKNGLPVLLYLFRRFERSLKGQPSILSLDEAWVMLGHSVFREKIREWLKELRKKNCLVIMATQSLSDASRSGILDVLLEQCPTKILLPNEEAETKGAEGVPGAVDLYRMIGLNDKEIQIIKTAKKKRQYYYKSILGRRLFELGLGNLALSFVAISNKEDLAEVKKLINENAQDWPLKWLEMRGVNYEKYLEKT
SIO_010081: NMK50_RS00100
subclass of: SO_0000673
so part of: NMK50_RS00100
location: complement(16462..18966)
location: region:16462-18966:-1
so has part: feature:16462-18966:-1:exon

WP_254769568.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16462-18966:-1:exon

NMK50_RS00105
type: Gene
subclass of: SO_0000704
RO_0002162: 2961895
gene: trbD
locus tag: NMK50_RS00105
old locus tag: NMK50_00105
so part of: sequence
location: complement(18966..19271)
location: region:18966-19271:-1
so has part: feature:18966-19271:-1:exon
subclass of: SO_0000010

position:19271:-1
position: 19271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18966-19271:-1:exon

NMK50_RS00105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2961895
gene: trbD
locus tag: NMK50_RS00105
old locus tag: NMK50_00105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007347993.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbD
translation: MGGKRYTQLFRSLHRPQQIMGGERELMLLSMLLTGILIVSAMNFVAATIGICIWFVCLYVLRRMAKYDPILSRIYMRQLRYRSYYAPFSRPFRVAKSTRPY
SIO_010081: NMK50_RS00105
subclass of: SO_0000673
so part of: NMK50_RS00105
location: complement(18966..19271)
location: region:18966-19271:-1
so has part: feature:18966-19271:-1:exon

WP_254769569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18966-19271:-1:exon

NMK50_RS00110
type: Gene
subclass of: SO_0000704
RO_0002162: 2961895
locus tag: NMK50_RS00110
old locus tag: NMK50_00110
so part of: sequence
location: complement(19271..19669)
location: region:19271-19669:-1
so has part: feature:19271-19669:-1:exon
subclass of: SO_0000010

position:19669:-1
position: 19669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19271-19669:-1:exon

NMK50_RS00110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2961895
locus tag: NMK50_RS00110
old locus tag: NMK50_00110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007347992.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbC/VirB2 family protein
translation: MQLSSIQTKNNSYNQIMMFFLIIGAVLLFFLILGDIAYASDATSGGGASLPWEAPLEKLKKSVSGPVAFVVSLLGLVAGGATLIFGGEVSEFVKRIIYLVLVISVIVFANTLLTGALFSGAVIPANAMVGRL
SIO_010081: NMK50_RS00110
subclass of: SO_0000673
so part of: NMK50_RS00110
location: complement(19271..19669)
location: region:19271-19669:-1
so has part: feature:19271-19669:-1:exon

WP_254769570.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19271-19669:-1:exon

NMK50_RS00115
type: Gene
subclass of: SO_0000704
RO_0002162: 2961895
gene: trbB
locus tag: NMK50_RS00115
old locus tag: NMK50_00115
so part of: sequence
location: complement(19681..20655)
location: region:19681-20655:-1
so has part: feature:19681-20655:-1:exon
subclass of: SO_0000010

position:19681:-1
position: 19681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20655:-1
position: 20655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19681-20655:-1:exon

NMK50_RS00115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2961895
gene: trbB
locus tag: NMK50_RS00115
old locus tag: NMK50_00115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015398789.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer ATPase TrbB
translation: MTVTAFKNGQSLEQNRRLIEKMRFEFGQQVWDYLSDPTIIEIMLNPDGTLWVEHLGEPKKAVGTMDAHRAEAIMGTVATVLGTQITKESPILECELPMNGSRFEAVIPPIVSAPAFTIRKKATQIFTLDDYVTKNILTPHQKSLLSNAVKDHKNILVVGGTGTGKTTLTNAILKEMTDTFPEERFVIIEDTAELQCSAPNTVTFRAVEYIDMTRLLKVTMRMAPDRIVVGEVRDGAALALLKSWNTGHPGGIATVHANDAVAGLTRIQQLISEATIAPMQSLIAETINVVLSIEKTSSGRKVKEIIEVFGYDPLTSKYITNLIH
SIO_010081: NMK50_RS00115
subclass of: SO_0000673
so part of: NMK50_RS00115
location: complement(19681..20655)
location: region:19681-20655:-1
so has part: feature:19681-20655:-1:exon

WP_254769571.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19681-20655:-1:exon

NMK50_RS00120
type: Gene
subclass of: SO_0000704
RO_0002162: 2961895
locus tag: NMK50_RS00120
old locus tag: NMK50_00120
so part of: sequence
location: complement(20861..21382)
location: region:20861-21382:-1
so has part: feature:20861-21382:-1:exon
subclass of: SO_0000010

position:20861:-1
position: 20861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21382:-1
position: 21382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20861-21382:-1:exon

NMK50_RS00120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2961895
locus tag: NMK50_RS00120
old locus tag: NMK50_00120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007478050.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQENSYVKILDEASISKKLHDVRRDLCGHIRNIGKSGDFSLLLDTERGLVENDLLRYANSKAMTSSLKTALTEIDVIKDHLELVSNPEKYDVINRGYSLSKHRKGDLPYDEARKAMASHYTRLGNLDKARLTTIEKTIIDVRRDNMKAMRKLYEKMQAKAIGIDLSRDKGHSL
SIO_010081: NMK50_RS00120
subclass of: SO_0000673
so part of: NMK50_RS00120
location: complement(20861..21382)
location: region:20861-21382:-1
so has part: feature:20861-21382:-1:exon

WP_254769572.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20861-21382:-1:exon

NMK50_RS00125
type: Gene
subclass of: SO_0000704
RO_0002162: 2961895
locus tag: NMK50_RS00125
old locus tag: NMK50_00125
so part of: sequence
location: complement(21411..21716)
location: region:21411-21716:-1
so has part: feature:21411-21716:-1:exon
subclass of: SO_0000010

position:21411:-1
position: 21411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21716:-1
position: 21716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21411-21716:-1:exon

NMK50_RS00125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2961895
locus tag: NMK50_RS00125
old locus tag: NMK50_00125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007347971.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEKKLPKSYMTDAEREELRAGGLSQDGIYTAESEAAAKANDSQAVWEWLAMTDIPAHSLLFLRHRRGAQFIRDMGFSTKNADKEYGPDWLDKGVMIGGHYF
SIO_010081: NMK50_RS00125
subclass of: SO_0000673
so part of: NMK50_RS00125
location: complement(21411..21716)
location: region:21411-21716:-1
so has part: feature:21411-21716:-1:exon

WP_254769573.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21411-21716:-1:exon

NMK50_RS00130
type: Gene
subclass of: SO_0000704
RO_0002162: 2961895
locus tag: NMK50_RS00130
old locus tag: NMK50_00130
so part of: sequence
location: complement(21798..24269)
location: region:21798-24269:-1
so has part: feature:21798-24269:-1:exon
subclass of: SO_0000010

position:21798:-1
position: 21798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24269:-1
position: 24269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21798-24269:-1:exon

NMK50_RS00130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2961895
locus tag: NMK50_RS00130
old locus tag: NMK50_00130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007347990.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zincin-like metallopeptidase domain-containing protein
translation: MSFEYVKAVTDYFIMQLQQGVAPWQQSLSPGCVRSPYNPQTGINYNSINNLWLAGQKYNDPRWLTYQQANEMGFRIKKDMKSTSILYWKQDEKKSFYDEDGKQQERSEKLSRPRLFLAKVFNGEQIDGLPDLESRPLLSEEIRHAKAEALLTASGAKIDSGDRKHAFYRGGDIDTIFLPEQDQFDSKDYFYATVLHELCHWTGHSSRLNRDITYPIGSSGYAKEKLRTTIASLMIGEQLNIGFDPKHNASYVSLWIEVMQNDPKEIFRAAFEAEKIKNFVMGLEAVKVVDVKKESFVSINTDRELDNKEKIFLNVPYSQKEEAKKLGAKWDKDAKSWYVPAGTNLDEKGLAHFSHGNEKTKPVPSIAQQFKEALHSAGLIVENPLMDGKLHRVPVENDKKTQKSGAYIGYSSPGGGYIQNFRSGEKIYWKPERVSSSLSLKEKKRLAIEAKERQEVLKKEITEKQNRAAKIASQIWESSKIATPDNAYCKLKGITKINDLREVPKDFPEELKKQGVMVVKSVEEAQKIKKNNPNIRTFLAGDLIIPLRDEDNNLSTLQTVNPTFKSFMKDGKKHECFTIVGSDSIGIDALNSDLEKPILIAEGYATASAVAQITHMPVVAAFDSGNLKNVARVMREKYPSRIILLVADNDHVAQEKLLPNGKKGINVGITAAYNAAVDIGGGVVYPEFQKEEKDFSDWDDYKRVHGSDKARNDFISKMKIAEIQARVMAERLQTLANIQDQFAIDDPTTALDDQYVYDERDAANQLRQRAAILNGRNINSNDIAMISRVRSHLFQDREQRLSQKPNTASYREKKDQEIESGLS
SIO_010081: NMK50_RS00130
subclass of: SO_0000673
so part of: NMK50_RS00130
location: complement(21798..24269)
location: region:21798-24269:-1
so has part: feature:21798-24269:-1:exon

WP_254769574.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21798-24269:-1:exon

NMK50_RS00135
type: Gene
subclass of: SO_0000704
RO_0002162: 2961895
locus tag: NMK50_RS00135
old locus tag: NMK50_00135
so part of: sequence
location: complement(24259..24477)
location: region:24259-24477:-1
so has part: feature:24259-24477:-1:exon
subclass of: SO_0000010

position:24259:-1
position: 24259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24477:-1
position: 24477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24259-24477:-1:exon

NMK50_RS00135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2961895
locus tag: NMK50_RS00135
old locus tag: NMK50_00135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007347989.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraD
translation: MKKNRIKVCAVISSTLNDAFIPGIQVALDSKEAESYGVFLETALSEEDAWDSCTTDPSETEIFDDMGGNHEF
SIO_010081: NMK50_RS00135
subclass of: SO_0000673
so part of: NMK50_RS00135
location: complement(24259..24477)
location: region:24259-24477:-1
so has part: feature:24259-24477:-1:exon

WP_254769575.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24259-24477:-1:exon

NMK50_RS00140
type: Gene
subclass of: SO_0000704
RO_0002162: 2961895
gene: traF
locus tag: NMK50_RS00140
old locus tag: NMK50_00140
so part of: sequence
location: complement(24494..25006)
location: region:24494-25006:-1
so has part: feature:24494-25006:-1:exon
subclass of: SO_0000010

position:24494:-1
position: 24494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25006:-1
position: 25006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24494-25006:-1:exon

NMK50_RS00140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2961895
gene: traF
locus tag: NMK50_RS00140
old locus tag: NMK50_00140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007347988.1
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0008233 - peptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugative transfer signal peptidase TraF
translation: MQKFMGILTLCSLAFACFVLFALSQGFRINYSHSAPIGLWRVNYFQKEVRRGELMEVCPPDAPIVKVFIEKGYLQSGACPNGSIPFLKPVVALAGDVVHITEKGISVNGHLLKNSQKRGEISGMPNGEYLVAEGDVWFVSSFDPVSFDSRYFGAVPIMNIVGSAKPILTF
SIO_010081: NMK50_RS00140
subclass of: SO_0000673
so part of: NMK50_RS00140
location: complement(24494..25006)
location: region:24494-25006:-1
so has part: feature:24494-25006:-1:exon

WP_254769576.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24494-25006:-1:exon

NMK50_RS00145
type: Gene
subclass of: SO_0000704
RO_0002162: 2961895
locus tag: NMK50_RS00145
old locus tag: NMK50_00145
so part of: sequence
location: complement(25006..26940)
location: region:25006-26940:-1
so has part: feature:25006-26940:-1:exon
subclass of: SO_0000010

position:26940:-1
position: 26940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25006-26940:-1:exon

NMK50_RS00145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2961895
locus tag: NMK50_RS00145
old locus tag: NMK50_00145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004857584.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MGGKLGNQSTHAPKRTSRLIFVFLFGFYFVVLNQCCTQYLAHIFHYSSSLGSNFKGIYQPFAWFFWAFNFYDYASSQCNIIFVLFCIGVLIGLVGFTLWAGFSSRSNKSTDDLHGTAHFATFDEIQEMGLIPHNQKGKGVYCGAFPDPKTGMLHYLRHDGPEHIAALAPTRSGKGVGLVVPTLLSWPHSLFVLDTKGENYAMTAGWRKNNARNKILRFDPAEPNVGCSWNPLGEIRFRTRYQVADAQNIALMVIDDDGKGIAGDHFRSAAFELLNGLILHALYKAEKIGRVPCLQDCAHMLTGVGDFAVIVEENDDFDDDGDPKALSTLFHEMENLDIKSDDPLFQDADREAKLVINGVGRRMAGTPARELGSIISTANNALSLYRDPIVGENTKYCDFYISDLMDTEDPVSLYFITTPRNLDRMRPLARLLLTQMVLSLSDRMEFDDGRSKTNHKHRLLLMLDEFPTLGKLDIFEKALAYIAGYGLKAYIITQDVQQLYKAYTTNESIISNCHIRIAYAPNKVETAEWMSKMAGETTVVREKISTSGKRFGMALEQVSTSYEETRRPLMTPDEIMRLPGAKKDNSGNIIEPGEMLIFVAGNSVIRGTQILYFLDPVFSERSKIAPPVTDRLHQRNEIKEGFVI
SIO_010081: NMK50_RS00145
subclass of: SO_0000673
so part of: NMK50_RS00145
location: complement(25006..26940)
location: region:25006-26940:-1
so has part: feature:25006-26940:-1:exon

WP_256481334.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25006-26940:-1:exon

NMK50_RS00150
type: Gene
subclass of: SO_0000704
RO_0002162: 2961895
locus tag: NMK50_RS00150
old locus tag: NMK50_00150
so part of: sequence
location: complement(27012..27536)
location: region:27012-27536:-1
so has part: feature:27012-27536:-1:exon
subclass of: SO_0000010

position:27012:-1
position: 27012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27536:-1
position: 27536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27012-27536:-1:exon

NMK50_RS00150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2961895
locus tag: NMK50_RS00150
old locus tag: NMK50_00150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007347986.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSREEGYVKKINDTLVAKKLCDIRNDLCDHIRNIGKSGNLSSLLDTERDIVKSDLLRYANSKAMASSLKTALTEIEVVKKHVVLVGDPVQYKVINEAYSLSKNRKGGLPYDEARQAMASHYTRLGNLDKARLTTVEKTIIDLRRDNMKVMRKLYEKMQAKAIGIDLSRDKGHSL
SIO_010081: NMK50_RS00150
subclass of: SO_0000673
so part of: NMK50_RS00150
location: complement(27012..27536)
location: region:27012-27536:-1
so has part: feature:27012-27536:-1:exon

WP_254769577.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27012-27536:-1:exon

NMK50_RS00155
type: Gene
subclass of: SO_0000704
RO_0002162: 2961895
locus tag: NMK50_RS00155
old locus tag: NMK50_00155
so part of: sequence
location: complement(27553..27858)
location: region:27553-27858:-1
so has part: feature:27553-27858:-1:exon
subclass of: SO_0000010

position:27553:-1
position: 27553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27858:-1
position: 27858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27553-27858:-1:exon

NMK50_RS00155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2961895
locus tag: NMK50_RS00155
old locus tag: NMK50_00155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007347985.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEKKLPKSYMTDAEREELRAGGLDQDCIYLSESEAADHAGDEKAAWEWLAMADLPAHTLLFLRSQNGAQFIRDMGFSTKNADEEYGPDWLDKGVMIGGHHF
SIO_010081: NMK50_RS00155
subclass of: SO_0000673
so part of: NMK50_RS00155
location: complement(27553..27858)
location: region:27553-27858:-1
so has part: feature:27553-27858:-1:exon

WP_254769578.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27553-27858:-1:exon

NMK50_RS00160
type: Gene
subclass of: SO_0000704
RO_0002162: 2961895
locus tag: NMK50_RS00160
old locus tag: NMK50_00160
so part of: sequence
location: complement(27919..28560)
location: region:27919-28560:-1
so has part: feature:27919-28560:-1:exon
subclass of: SO_0000010

position:27919:-1
position: 27919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28560:-1
position: 28560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27919-28560:-1:exon

NMK50_RS00160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2961895
locus tag: NMK50_RS00160
old locus tag: NMK50_00160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011807301.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MTLLGYARVSTHQQKLTLQINALKEVGVREDRIFTDMITGSTDKREGLQRLLGRAERDDIIICTKMDRLGRNTADMIRIIDDCYKKGITFRFLENNFSTEGAMGKMVVQILLAVAEAERVRILERTMEGRAAAIEAGVRLGRKPHPKTEIALSLIKNGFPLKVVQKKTGISRITYFRLKRQINGIKPIKAIRQPVFLDDKYQTDLEDFIENLS
SIO_010081: NMK50_RS00160
subclass of: SO_0000673
so part of: NMK50_RS00160
location: complement(27919..28560)
location: region:27919-28560:-1
so has part: feature:27919-28560:-1:exon

WP_254769579.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27919-28560:-1:exon

NMK50_RS00165
type: Gene
subclass of: SO_0000704
RO_0002162: 2961895
locus tag: NMK50_RS00165
old locus tag: NMK50_00165
so part of: sequence
location: 29001..29357
location: region:29001-29357:1
so has part: feature:29001-29357:1:exon
subclass of: SO_0000010

position:29001:1
position: 29001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29357:1
position: 29357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29001-29357:1:exon

NMK50_RS00165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2961895
locus tag: NMK50_RS00165
old locus tag: NMK50_00165
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019222889.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MQDKNPHSNDISIGKKIRLRREMIGISQKQLGNQLGITFQQIQKYETGLNRVSAGRLQEIANILDISISFFYNDISTKENISYPSDEGISNKEEYLLLKSFRMLKTKKQKAILWLISE
SIO_010081: NMK50_RS00165
subclass of: SO_0000673
so part of: NMK50_RS00165
location: 29001..29357
location: region:29001-29357:1
so has part: feature:29001-29357:1:exon

WP_254769580.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29001-29357:1:exon

NMK50_RS00170
type: Gene
subclass of: SO_0000704
RO_0002162: 2961895
locus tag: NMK50_RS00170
old locus tag: NMK50_00170
so part of: sequence
location: complement(29379..29747)
location: region:29379-29747:-1
so has part: feature:29379-29747:-1:exon
subclass of: SO_0000010

position:29379:-1
position: 29379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29379-29747:-1:exon

NMK50_RS00170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2961895
locus tag: NMK50_RS00170
old locus tag: NMK50_00170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019223236.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKERKPTFTILDNLSTVEPTTKAPKRDKQDIDKIAQQSGFTTRHASFEDLKEPILTKSGHVDGRSKRRSMRTNRITLAIRPDVDEEFRALAEKLTPPGQNLLTLGDVLQILIRSYNNSVKG
SIO_010081: NMK50_RS00170
subclass of: SO_0000673
so part of: NMK50_RS00170
location: complement(29379..29747)
location: region:29379-29747:-1
so has part: feature:29379-29747:-1:exon

WP_254769581.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29379-29747:-1:exon