Bartonella harrusi strain 117A plasmid pBHa, complete sequence.
Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales; Bartonellaceae; Bartonella.
First report of Bartonella spp. in marsupials in Brazil, with a description of Bartonella harrusi sp. nov. and new proposal for taxonomic reclassification of species of the genus Bartonella
Submitted (08-JUL-2022) Veterinary Pathology, School of Agricultural and Veterinarian Sciences (FCAV), Via de Acesso Prof. Paulo Donato Castellane, Jaboticabal, Sao Paulo 14884-900, Brazil
REFSEQ INFORMATION: The reference sequence is identical to\nCP101113.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 14-MAR-2022\nAssembly Method :: MaSuRCA v. v. 3.2.4\nAssembly Name :: BatHar\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 43.0x\nSequencing Technology :: Illumina NovaSeq; Oxford Nanopore MinION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 08/29/2022 16:39:02\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.2\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 2,095\nCDSs (total) :: 2,043\nGenes (coding) :: 1,824\nCDSs (with protein) :: 1,824\nGenes (RNA) :: 52\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 42\nncRNAs :: 4\nPseudo Genes (total) :: 219\nCDSs (without protein) :: 219\nPseudo Genes (ambiguous residues) :: 1 of 219\nPseudo Genes (frameshifted) :: 144 of 219\nPseudo Genes (incomplete) :: 124 of 219\nPseudo Genes (internal stop) :: 69 of 219\nPseudo Genes (multiple problems) :: 87 of 219\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_007478103.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015125203.1
COORDINATES: similar to AA sequence:RefSeq:WP_005864504.1
COORDINATES: similar to AA sequence:RefSeq:WP_007347980.1
COORDINATES: similar to AA sequence:RefSeq:WP_007347979.1
GO:0009291 - unidirectional conjugation [Evidence IEA]
P-type conjugative transfer protein TrbG
COORDINATES: similar to AA sequence:RefSeq:WP_007347978.1
COORDINATES: similar to AA sequence:RefSeq:WP_007347977.1
relaxase/mobilization nuclease domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007347976.1
COORDINATES: similar to AA sequence:RefSeq:WP_007347975.1
COORDINATES: similar to AA sequence:RefSeq:WP_007347974.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_005773367.1
COORDINATES: similar to AA sequence:RefSeq:WP_019223216.1
COORDINATES: similar to AA sequence:RefSeq:WP_004861373.1
COORDINATES: similar to AA sequence:RefSeq:WP_007478145.1
COORDINATES: similar to AA sequence:RefSeq:WP_006923559.1
COORDINATES: similar to AA sequence:RefSeq:WP_007347996.1
P-type conjugative transfer protein TrbL
COORDINATES: similar to AA sequence:RefSeq:WP_007347995.1
P-type conjugative transfer protein TrbJ
COORDINATES: similar to AA sequence:RefSeq:WP_007347994.1
COORDINATES: similar to AA sequence:RefSeq:WP_007347993.1
COORDINATES: similar to AA sequence:RefSeq:WP_007347992.1
COORDINATES: similar to AA sequence:RefSeq:WP_015398789.1
COORDINATES: similar to AA sequence:RefSeq:WP_007478050.1
COORDINATES: similar to AA sequence:RefSeq:WP_007347971.1
COORDINATES: similar to AA sequence:RefSeq:WP_007347990.1
zincin-like metallopeptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007347989.1
COORDINATES: similar to AA sequence:RefSeq:WP_007347988.1
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0008233 - peptidase activity [Evidence IEA]
conjugative transfer signal peptidase TraF
COORDINATES: similar to AA sequence:RefSeq:WP_004857584.1
type IV secretory system conjugative DNA transfer family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007347986.1
COORDINATES: similar to AA sequence:RefSeq:WP_007347985.1
COORDINATES: similar to AA sequence:RefSeq:WP_011807301.1
COORDINATES: similar to AA sequence:RefSeq:WP_019222889.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_019223236.1