Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_2, 16s ribosomal rna rrna prediction is too short.
type: Entry
definition: Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_2, 16s ribosomal rna rrna prediction is too short.
sequence version: NZ_CP015440.1
sequence date: 2023-02-23
sequence: sequence
division: CON
label: NZ_CP015440.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN04570556
keyword: RefSeq
source: Anoxybacillus amylolyticus
organism: Anoxybacillus amylolyticus
taxonomy: Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Anoxybacillus.
reference: 1
references: 16682297
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP015440.1.\nSource bacteria/DNA available from Dr. Pilar E. Junier.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: DEC-2015\nAssembly Method :: HGAP v. unspecified\nGenome Coverage :: 158x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/23/2023 05:34:40\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,342\nCDSs (total) :: 3,234\nGenes (coding) :: 3,138\nCDSs (with protein) :: 3,138\nGenes (RNA) :: 108\nrRNAs :: 7, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 7, 7, 7 (5S, 16S, 23S)\ntRNAs :: 82\nncRNAs :: 5\nPseudo Genes (total) :: 96\nCDSs (without protein) :: 96\nPseudo Genes (ambiguous residues) :: 0 of 96\nPseudo Genes (frameshifted) :: 32 of 96\nPseudo Genes (incomplete) :: 69 of 96\nPseudo Genes (internal stop) :: 31 of 96\nPseudo Genes (multiple problems) :: 28 of 96\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 65295
topology: circular
so has quality: SO_0000988
location: 1..65295
location: region:1-65295:1
RO_0002162: 294699

NZ_CP015440
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN04570556
type: BioSample
SIO_000068: biosample

1
title: Anoxybacillus amylolyticus sp. nov., a thermophilic amylase producing bacterium isolated from Mount Rittmann (Antarctica)
author: Poli, A.
author: Esposito, E.
author: Lama, L.
author: Orlando, P.
author: Nicolaus, G.
author: de Appolonia, F.
author: Gambacorta, A.
author: Nicolaus, B.
journal: Syst Appl Microbiol
volume: 29
issue: 4
pages: 300-307
year: 2006
pubmed: 16682297

16682297
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Filippidou, S.
author: Palmeieri, F.
author: Junier, T.
author: Palmieri, F.
author: Johnson, S.L.
author: Chain, P.S.
author: Junier, P.E.
author: Poli, A.
author: Esposito, E.
author: Lama, L.
author: Orlando, P.
author: Nicolaus, G.
author: de Appolonia, F.
author: Gambacorta, A.
author: Nicolaus, B.
journal: Submitted (27-APR-2016) Bioscience, Los Alamos National Laboratory, PO Box 1663, Los Alamos, NM 87545, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65295:1
position: 65295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-65295:1:source
so part of: sequence
organism: Anoxybacillus amylolyticus
mol type: genomic DNA
strain: DSM 15939
isolation source: Soil
culture collection: DSM:15939
type material: type strain of Anoxybacillus amylolyticus
plasmid: pDSM15939_2
country: Antarctica: Mount Rittmann
collection date: 2002
note: type strain of Anoxybacillus amylolyticus

294699
type: Taxonomy
SIO_000068: taxonomy

GFC30_RS15880
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS15880
old locus tag: GFC30_3260
so part of: sequence
location: 60..135
location: region:60-135:1
so has part: feature:60-135:1:exon
subclass of: SO_0000663

position:60:1
position: 60
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135:1
position: 135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60-135:1:exon

GFC30_RS15880
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 294699
locus tag: GFC30_RS15880
old locus tag: GFC30_3260
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:93..95,aa:Val,seq:tac)
SIO_010081: GFC30_RS15880
subclass of: SO_0000673
so part of: GFC30_RS15880
location: 60..135
location: region:60-135:1
so has part: feature:60-135:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:60-135:1:exon

GFC30_RS15885
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS15885
old locus tag: GFC30_3261
so part of: sequence
location: 292..367
location: region:292-367:1
so has part: feature:292-367:1:exon
subclass of: SO_0000663

position:292:1
position: 292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367:1
position: 367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292-367:1:exon

GFC30_RS15885
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 294699
locus tag: GFC30_RS15885
old locus tag: GFC30_3261
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:325..327,aa:Thr,seq:tgt)
SIO_010081: GFC30_RS15885
subclass of: SO_0000673
so part of: GFC30_RS15885
location: 292..367
location: region:292-367:1
so has part: feature:292-367:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:292-367:1:exon

GFC30_RS15890
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS15890
old locus tag: GFC30_3262
so part of: sequence
location: 376..460
location: region:376-460:1
so has part: feature:376-460:1:exon
subclass of: SO_0000663

position:376:1
position: 376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460:1
position: 460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376-460:1:exon

GFC30_RS15890
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 294699
locus tag: GFC30_RS15890
old locus tag: GFC30_3262
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:410..412,aa:Tyr,seq:gta)
SIO_010081: GFC30_RS15890
subclass of: SO_0000673
so part of: GFC30_RS15890
location: 376..460
location: region:376-460:1
so has part: feature:376-460:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:376-460:1:exon

GFC30_RS15895
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS15895
old locus tag: GFC30_3263
so part of: sequence
location: 859..933
location: region:859-933:1
so has part: feature:859-933:1:exon
subclass of: SO_0000663

position:859:1
position: 859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:933:1
position: 933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:859-933:1:exon

GFC30_RS15895
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 294699
locus tag: GFC30_RS15895
old locus tag: GFC30_3263
product: tRNA-Gln
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:891..893,aa:Gln,seq:ttg)
SIO_010081: GFC30_RS15895
subclass of: SO_0000673
so part of: GFC30_RS15895
location: 859..933
location: region:859-933:1
so has part: feature:859-933:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:859-933:1:exon

GFC30_RS15900
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS15900
old locus tag: GFC30_3264
so part of: sequence
location: 1095..1167
location: region:1095-1167:1
so has part: feature:1095-1167:1:exon
subclass of: SO_0000663

position:1095:1
position: 1095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1167:1
position: 1167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1095-1167:1:exon

GFC30_RS15900
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 294699
locus tag: GFC30_RS15900
old locus tag: GFC30_3264
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1128..1130,aa:Lys,seq:ttt)
SIO_010081: GFC30_RS15900
subclass of: SO_0000673
so part of: GFC30_RS15900
location: 1095..1167
location: region:1095-1167:1
so has part: feature:1095-1167:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1095-1167:1:exon

GFC30_RS15905
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS15905
old locus tag: GFC30_3265
so part of: sequence
location: 1174..1248
location: region:1174-1248:1
so has part: feature:1174-1248:1:exon
subclass of: SO_0000663

position:1174:1
position: 1174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1248:1
position: 1248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1174-1248:1:exon

GFC30_RS15905
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 294699
locus tag: GFC30_RS15905
old locus tag: GFC30_3265
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1206..1208,aa:Gly,seq:gcc)
SIO_010081: GFC30_RS15905
subclass of: SO_0000673
so part of: GFC30_RS15905
location: 1174..1248
location: region:1174-1248:1
so has part: feature:1174-1248:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1174-1248:1:exon

GFC30_RS15910
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS15910
old locus tag: GFC30_3266
so part of: sequence
location: 1262..1334
location: region:1262-1334:1
so has part: feature:1262-1334:1:exon
subclass of: SO_0000663

position:1262:1
position: 1262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1334:1
position: 1334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1262-1334:1:exon

GFC30_RS15910
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 294699
locus tag: GFC30_RS15910
old locus tag: GFC30_3266
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1295..1297,aa:Ala,seq:tgc)
SIO_010081: GFC30_RS15910
subclass of: SO_0000673
so part of: GFC30_RS15910
location: 1262..1334
location: region:1262-1334:1
so has part: feature:1262-1334:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1262-1334:1:exon

GFC30_RS15915
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
gene: rocF
locus tag: GFC30_RS15915
old locus tag: GFC30_3267
so part of: sequence
location: 1877..2779
location: region:1877-2779:1
so has part: feature:1877-2779:1:exon
subclass of: SO_0000010

position:1877:1
position: 1877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2779:1
position: 2779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1877-2779:1:exon

GFC30_RS15915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
gene: rocF
locus tag: GFC30_RS15915
old locus tag: GFC30_3267
EC number: 3.5.3.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014194613.1
GO function: GO:0004053 - arginase activity [Evidence IEA]
GO process: GO:0019547 - arginine catabolic process to ornithine [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: arginase
translation: MKKISIIGVPMDLGQTRRGVDMGPSAIRYAGVVERLERLQYEMEDLGDIAIGKAERIDDEGVRLNLRNLKAVAEANEKLAQTVDEVIRKGNFPLVLGGDHSIAIGTLAGVAKHYENLGVIWYDAHGDLNTAETSPSGNIHGMPLAASLGLGHPALTQIGGYSPKVKPENIVLIGARALDEGEKQLIREKGIKVYTMHEIDRLGMTRVMEETIAYLKERTDGVHLSLDLDGLDPHDAPGVGTPVIGGLTYRESHLAMEMLAEAQLITSAEFVEVNPILDERNKTASVAVALMGSLFGEKLV
SIO_010081: GFC30_RS15915
subclass of: SO_0000673
so part of: GFC30_RS15915
location: 1877..2779
location: region:1877-2779:1
so has part: feature:1877-2779:1:exon

WP_066328126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1877-2779:1:exon

GFC30_RS15920
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
gene: sigW
locus tag: GFC30_RS15920
old locus tag: GFC30_3268
so part of: sequence
location: 2915..3478
location: region:2915-3478:1
so has part: feature:2915-3478:1:exon
subclass of: SO_0000010

position:2915:1
position: 2915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3478:1
position: 3478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2915-3478:1:exon

GFC30_RS15920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
gene: sigW
locus tag: GFC30_RS15920
old locus tag: GFC30_3268
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009362620.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase sigma factor SigW
translation: MDLFVNKRIKAIQKGDQNAYAEIVELYKEKVYRICYRMLGNRHEAEDAAQEAFIRAYVNIDRYNPAMKFSSWLYRIATNLSIDKLRKKKPDVYLDEEVSGAEGLTMYSQLPATDVSPEDTVESLELQETVQKAIEKLPEKYRSVIVLKYIEDLSLQEISEILDLPIGTVKTRIHRGREALRKHLGHL
SIO_010081: GFC30_RS15920
subclass of: SO_0000673
so part of: GFC30_RS15920
location: 2915..3478
location: region:2915-3478:1
so has part: feature:2915-3478:1:exon

WP_066328042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2915-3478:1:exon

GFC30_RS15925
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS15925
old locus tag: GFC30_3269
so part of: sequence
location: 3491..4093
location: region:3491-4093:1
so has part: feature:3491-4093:1:exon
subclass of: SO_0000010

position:3491:1
position: 3491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4093:1
position: 4093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3491-4093:1:exon

GFC30_RS15925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS15925
old locus tag: GFC30_3269
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003247642.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anti-sigma factor
translation: MKCPDHVVQWMHDYLDGDIAPNDEQALREHLQQCPSCSHHFNSLKKTVAFIQHCSHLVPSADFTVNVMARLPKEKRRIRLGRWLKNHPFIAAASLFFLLMIGSLYTMWNQEQQFSVSTRENVVIHGHTVIVPKGKTVDGDIVVRNGTIKIEGKVNGNVTVIHGEKYLASAGQVTGEVEEINEAFDWIWYNIKSAVKGLLE
SIO_010081: GFC30_RS15925
subclass of: SO_0000673
so part of: GFC30_RS15925
location: 3491..4093
location: region:3491-4093:1
so has part: feature:3491-4093:1:exon

WP_066328044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3491-4093:1:exon

GFC30_RS15930
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
gene: cdaA
locus tag: GFC30_RS15930
old locus tag: GFC30_3270
so part of: sequence
location: 4193..5014
location: region:4193-5014:1
so has part: feature:4193-5014:1:exon
subclass of: SO_0000010

position:4193:1
position: 4193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5014:1
position: 5014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4193-5014:1:exon

GFC30_RS15930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
gene: cdaA
locus tag: GFC30_RS15930
old locus tag: GFC30_3270
EC number: 2.7.7.85
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011229664.1
GO function: GO:0004016 - adenylate cyclase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diadenylate cyclase CdaA
translation: MSFGELPVLSYVTKVVDILVVWYVIYKLIMVIRGTKAVQLLKGIILIILVRIVSNFLGLSTLQWLMDQALTWGFLAIIIIFQPELRRALEQLGRGKLFSRSTIPEEEERAQMVEAIVKATEYMAKRRIGALISVERETGMGDYIETGIPLNACVSSELLINIFIPNTPLHDGAVIIQKNFIAAAGCYLPLSESPFISKELGTRHRAALGISEVTDSVTVIVSEETGAVSVTKNGELHRDLTPEQFSELLKKELIPATKTTSSSRWQWRGKKHG
SIO_010081: GFC30_RS15930
subclass of: SO_0000673
so part of: GFC30_RS15930
location: 4193..5014
location: region:4193-5014:1
so has part: feature:4193-5014:1:exon

WP_066328047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4193-5014:1:exon

GFC30_RS15935
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS15935
old locus tag: GFC30_3271
so part of: sequence
location: 5016..6254
location: region:5016-6254:1
so has part: feature:5016-6254:1:exon
subclass of: SO_0000010

position:5016:1
position: 5016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6254:1
position: 6254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5016-6254:1:exon

GFC30_RS15935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS15935
old locus tag: GFC30_3271
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015373736.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CdaR family protein
translation: MDNLMNNHWFMKIFALLLAIMLYMSVNIEGKESKSGITRNSIGQTDVETVTNVPVVTYYDEQNLVVSGVPKTVNVTLEGPASIVKPTALQRDFEIYVDLANLELGTYTVPLKYKNISDKLKVTIEPSTTKVTIQEKVSRDFSVDVDFIHKNKLVDGYSVEEPIVKPSVVTITGAKDVVERIALVKARVDLDGAVDTVKQESRVRAYDREGKLLDVNINPSVVEVTVPIKSPSKSVPLKINRTGTLKAGLSIVKIEAVPSEVTIFGPKDKIDPIEFIDGITINLDDITSDTTLEVPVPLPEGVKSVDPAKVKIHIEVQQEETKTFSSLPIHIIGLGDKYNVQFLNPKDGNMDVQVYGAPSVLNSIRADDLQLYVNASELGVGEHDVEVEVNGPQNITWKLPDNKAKIRISQRS
SIO_010081: GFC30_RS15935
subclass of: SO_0000673
so part of: GFC30_RS15935
location: 5016..6254
location: region:5016-6254:1
so has part: feature:5016-6254:1:exon

WP_066328129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5016-6254:1:exon

GFC30_RS15940
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
gene: glmM
locus tag: GFC30_RS15940
old locus tag: GFC30_3272
so part of: sequence
location: 6276..7619
location: region:6276-7619:1
so has part: feature:6276-7619:1:exon
subclass of: SO_0000010

position:6276:1
position: 6276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7619:1
position: 7619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6276-7619:1:exon

GFC30_RS15940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
gene: glmM
locus tag: GFC30_RS15940
old locus tag: GFC30_3272
EC number: 5.4.2.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009362624.1
GO function: GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO process: GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoglucosamine mutase
translation: MGKYFGTDGVRGVANSELTPELAFKIGRCGGYVLTKDKERPKVLIGRDTRISGHMLEGALVAGLLSIGAEVMRLGVISTPGVAYLTKALGAQAGIMISASHNPVQDNGIKFFGPDGFKLSDEQELEIEALLDSEQDTLPRPIGKNLGQVNDYFEGGQKYLQYLKQTVDEDFSGIHVALDCAHGATSSLATHLFADLDADVSTMGASPNGLNINDSVGSTHPEALAAFVKEKEADVGLAFDGDGDRLIAVDENGQIVDGDQIMYICAKYLNEHGRLKHQTVVSTVMSNLGFYKALEAQGIKSVQTAVGDRYVVEEMKKNGYNLGGEQSGHIIFLDYNTTGDGLLTALQLVNIMKMTKKPLSELAGEMKKYPQTLVNVKVTDKQEAIANEEVQRVIREVEEEMAGNGRILVRPSGTEPLVRVMAEASTNELCDQYVERIASVIRDRFGA
SIO_010081: GFC30_RS15940
subclass of: SO_0000673
so part of: GFC30_RS15940
location: 6276..7619
location: region:6276-7619:1
so has part: feature:6276-7619:1:exon

WP_066328048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6276-7619:1:exon

GFC30_RS15945
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
gene: glmS
locus tag: GFC30_RS15945
old locus tag: GFC30_3273
so part of: sequence
location: 8013..9815
location: region:8013-9815:1
so has part: feature:8013-9815:1:exon
subclass of: SO_0000010

position:8013:1
position: 8013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9815:1
position: 9815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8013-9815:1:exon

GFC30_RS15945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
gene: glmS
locus tag: GFC30_RS15945
old locus tag: GFC30_3273
EC number: 2.6.1.16
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011229667.1
GO function: GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO process: GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamine--fructose-6-phosphate transaminase (isomerizing)
translation: MCGIVGYIGEQPSKEILLYGLEKLEYRGYDSAGIALLNGQGVHVFKEKGRIADLRAIVAEDVDAPLGIGHTRWATHGVPNRVNAHPHQSASGRFTLVHNGVIENYELLKRDYLAHVSFKSDTDTEVIVQLIETFVNDGLTVEEAFRKALSLLKGSYAIALIDAENNGVIYAAKNKSPLLAGLGEGFNVVASDALAMLQVTSQYVELMDKEIVIVTKESVTIKKLNGEVVERAPYVAELDASDIEKGTYPYYMLKEIDEQPLVIRRLIEKYRNEQGELAIDEDIVQAVNEADRLYIVACGTSYHAGLVGKQLIENWAKIPVEVHIASEFSYNMPLLSEKPLFIYISQSGETADSRAVLVRTKELGHKSLTITNVPGSTLSREADYTLLLHAGPEIAVASTKAYTAQIAVLAMLASVAAKAKGIALDVDVTKELGIVANAMETLCDAKHEMEQIAREYLATTRNCFFIGRAVDYYVVLEGALKLKEISYIQAEGFAGGELKHGTIALIENGTPVIALATQEHVNLSIRGNVKEVVARGANPCIISMKGLDMEDDRFVIPAVHPMLTPLVSVVPLQLIAYYAALHRGCDVDKPRNLAKSVTVE
SIO_010081: GFC30_RS15945
subclass of: SO_0000673
so part of: GFC30_RS15945
location: 8013..9815
location: region:8013-9815:1
so has part: feature:8013-9815:1:exon

WP_066328052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8013-9815:1:exon

GFC30_RS15950
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS15950
old locus tag: GFC30_3274
so part of: sequence
location: complement(9905..10354)
location: region:9905-10354:-1
so has part: feature:9905-10354:-1:exon
subclass of: SO_0000010

position:9905:-1
position: 9905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10354:-1
position: 10354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9905-10354:-1:exon

GFC30_RS15950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS15950
old locus tag: GFC30_3274
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004577781.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl-CoA thioesterase
translation: MEVSVEQSKTIQTRLVLPSDTNHLGTIFGGTVLAYIDEIAAVSAMRHARKAVVTVSIDKVDFISSAKVGDILKLEAFVYSTGRTSMKVFVKVETEDLFTGEHCLTTTCFLTMVAIDQNKKPTPVPKVIISEREEKLVQLYQQNKRNNKA
SIO_010081: GFC30_RS15950
subclass of: SO_0000673
so part of: GFC30_RS15950
location: complement(9905..10354)
location: region:9905-10354:-1
so has part: feature:9905-10354:-1:exon

WP_066328058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9905-10354:-1:exon

GFC30_RS15955
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
gene: metE
locus tag: GFC30_RS15955
old locus tag: GFC30_3275
pseudo: true
so part of: sequence
location: complement(10345..>11931)
location: region:10345-11931:-1
so has part: feature:10345-11931:-1:exon
subclass of: SO_0000010

position:10345:-1
position: 10345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11931:-1
position: 11931
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10345-11931:-1:exon

GFC30_RS15955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
gene: metE
locus tag: GFC30_RS15955
old locus tag: GFC30_3275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009362627.1
GO function: GO:0003871 - 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO process: GO:0008652 - amino acid biosynthetic process [Evidence IEA]; GO:0009086 - methionine biosynthetic process [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase
SIO_010081: GFC30_RS15955
subclass of: SO_0000673
so part of: GFC30_RS15955
location: complement(10345..>11931)
location: region:10345-11931:-1
so has part: feature:10345-11931:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10345-11931:-1:exon

GFC30_RS15960
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS15960
old locus tag: GFC30_3276
so part of: sequence
location: complement(12095..13336)
location: region:12095-13336:-1
so has part: feature:12095-13336:-1:exon
subclass of: SO_0000010

position:12095:-1
position: 12095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13336:-1
position: 13336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12095-13336:-1:exon

GFC30_RS15960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS15960
old locus tag: GFC30_3276
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003320837.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS4 family transposase
translation: MDCITFQALWKELDVRVFSKLIPIIDVDKYIKKLSAYRFLQLLIFAQINEIDSLTAMAKHVKDTKELHTELELDAISTSQLSRKLKHLSPSLFETIFHHLVQTIQRQLQATPTVEQIRRLHIIDSTTMSMCIGQYPWATFRKTKAGVRLHLRVVVQNDMTIPDRGVLLPAKHADRTQMEELITYDEEAIYLFNRGYVDYQQFDRLCEEGISFITRLKDNAIVEVWNEQRPDDESMMRDQEGVLGTNKTKMKHPLRLIQTKDSEGTVIVLVTNCFDRSAKEIADLYRCRWKIETFFKWMKQHLRIKRFWGTSENAVYTQIWVALITYCLQVLLQVKTGYKGTLLEVKRTIRLLLFQPFSEVIRSLFRKPSRKSKGRRTYRWVEEFERIEQQWVEGEVEHLDELEYDPIFLAPWK
SIO_010081: GFC30_RS15960
subclass of: SO_0000673
so part of: GFC30_RS15960
location: complement(12095..13336)
location: region:12095-13336:-1
so has part: feature:12095-13336:-1:exon

WP_066328059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12095-13336:-1:exon

GFC30_RS15965
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS15965
old locus tag: GFC30_3277
so part of: sequence
location: complement(13456..14166)
location: region:13456-14166:-1
so has part: feature:13456-14166:-1:exon
subclass of: SO_0000010

position:13456:-1
position: 13456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14166:-1
position: 14166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13456-14166:-1:exon

GFC30_RS15965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS15965
old locus tag: GFC30_3277
inference: COORDINATES: protein motif:HMM:NF019872.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFIRSSNVGYPRIGEKREWKKALDSFWNGQINEQQFIKTMEHIRLDSIRKQLERGIDLIPIGDFSLYDHVLDTAFMFGYVPERFKQMDNVLAQYFAMARGTNGQHALEMTKWFNTNYHYIVPEIEQTKPGLVENRLLKEYKLVKETFHVETKPVLLGPITFLLLSKQYERHEWRKHLAQLVPVYVELLKQLSEAGVSFVQIDEPILVQNVDDDIIDAFRDVYEVFHRDVPNIISFA
SIO_010081: GFC30_RS15965
subclass of: SO_0000673
so part of: GFC30_RS15965
location: complement(13456..14166)
location: region:13456-14166:-1
so has part: feature:13456-14166:-1:exon

WP_066328060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13456-14166:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 294699
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00174
inference: COORDINATES: profile:INFERNAL:1.1.1
note: cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: adenosylcobalamin
so part of: sequence
location: complement(14307..14497)
location: region:14307-14497:-1
so has part: feature:14307-14497:-1:region

position:14307:-1
position: 14307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14497:-1
position: 14497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14307-14497:-1:region

GFC30_RS15970
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS15970
old locus tag: GFC30_3279
so part of: sequence
location: 15083..16174
location: region:15083-16174:1
so has part: feature:15083-16174:1:exon
subclass of: SO_0000010

position:15083:1
position: 15083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16174:1
position: 16174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15083-16174:1:exon

GFC30_RS15970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS15970
old locus tag: GFC30_3279
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: SagB/ThcOx family dehydrogenase
translation: MKYFFNPMLRYFHLQNEEYVLDLLNEEYYSVEILYNELIFEILKITSNQPCNKNEIVAQILSLYEIDKDLLFQFLEQLIKEKLLLSELDYRKEWLDLQELWKTFNWNEAYVYQLFNNAKKKLDYSQSGYEIDIEGMREFKREKNPPSIYKEYDSKQKRVRLKEVATISTTNFSVRDVMISKKAKSSKINFDQLSYLLKMVFGRQGIKTTSLGDEYLLKTSPSGGIKHPTECYLITTNNIKLSELSKNSVYHYSVYSNNLVEINNLSEINLQKVCPLIKENLNHYSLIIILTSIFERSMYRYRESRSFKAVNIDVGHLLSSATLILDSLNISYNLSHSTSFEYVNSLLNIDGLKEASIGYIAIK
SIO_010081: GFC30_RS15970
subclass of: SO_0000673
so part of: GFC30_RS15970
location: 15083..16174
location: region:15083-16174:1
so has part: feature:15083-16174:1:exon

WP_066328061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15083-16174:1:exon

GFC30_RS15975
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS15975
old locus tag: GFC30_3280
so part of: sequence
location: complement(16217..16735)
location: region:16217-16735:-1
so has part: feature:16217-16735:-1:exon
subclass of: SO_0000010

position:16217:-1
position: 16217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16735:-1
position: 16735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16217-16735:-1:exon

GFC30_RS15975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS15975
old locus tag: GFC30_3280
inference: COORDINATES: protein motif:HMM:NF033545.0
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MVLLHVDETHVRAYQALRTTWAEVGNQKQVPSYGHHAHVSIFGAVDVQQGDVVFHRASSANAETFLDFLRLLKEKYPNRFIVLVLDNARIHHANMVQAFLDCEEGGAFHFIFLPPYSPHLNPIERLWKWLKDEVIANVLHKNQNDIAQSITRFEQYVLQHPDEVLRRIGCAA
SIO_010081: GFC30_RS15975
subclass of: SO_0000673
so part of: GFC30_RS15975
location: complement(16217..16735)
location: region:16217-16735:-1
so has part: feature:16217-16735:-1:exon

WP_066328063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16217-16735:-1:exon

GFC30_RS15980
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS15980
old locus tag: GFC30_3281
so part of: sequence
location: complement(16748..17275)
location: region:16748-17275:-1
so has part: feature:16748-17275:-1:exon
subclass of: SO_0000010

position:16748:-1
position: 16748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17275:-1
position: 17275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16748-17275:-1:exon

GFC30_RS15980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS15980
old locus tag: GFC30_3281
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006324127.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: winged helix-turn-helix domain-containing protein
translation: MKRLKITNDHGWTPQKLRKQERKIKDASLRVRVTAVRLVMEGHLGKDVAKMINLCRQSVALYVARFNEGGLDHLLDRRLPPGRVPFLTEEQQQEIRQLVLTTTPVDVGWGISSSWNTRILQSYIQQTYGVSMSREGIRKLLHRLRLSWTRPTDKLVKGDPTLQAAFEKELEFIKK
SIO_010081: GFC30_RS15980
subclass of: SO_0000673
so part of: GFC30_RS15980
location: complement(16748..17275)
location: region:16748-17275:-1
so has part: feature:16748-17275:-1:exon

WP_066328064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16748-17275:-1:exon

GFC30_RS15985
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS15985
old locus tag: GFC30_3282
so part of: sequence
location: 17797..18873
location: region:17797-18873:1
so has part: feature:17797-18873:1:exon
subclass of: SO_0000010

position:17797:1
position: 17797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18873:1
position: 18873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17797-18873:1:exon

GFC30_RS15985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS15985
old locus tag: GFC30_3282
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: SagB/ThcOx family dehydrogenase
translation: MEKYYLNPVFIGDLDPNESSFIKITIPVPNREVKISHGEFISLIKAFKSKEYVEKNELTAIFTGTQIQYLLEQELIKKEPFDNTYAEGIQQWIDYGWHEALIFHLISNRVEYEDDDWDYNKTINMRNELINRYSNFLCTYLPLDNVYEVKLSNEVKKLSHVSFEKALLNRRSNQPWSKDKFTLDELSEILYISLYKFREKRKVNAKILEDKDIESYHKLYEMSYVDSFYLYVISYDIEGLENGIYFYDILNHKLLLIKKGLFRNEVTEICIGQKLAGSGKVSIALAIDWLPYMIRYQHERAYRNLFIAAGQIMQRLLITFSGMNKSMFITPAIREEKVDKLMGLNNFEQAIVYFTTAG
SIO_010081: GFC30_RS15985
subclass of: SO_0000673
so part of: GFC30_RS15985
location: 17797..18873
location: region:17797-18873:1
so has part: feature:17797-18873:1:exon

WP_066328066.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17797-18873:1:exon

GFC30_RS15990
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS15990
old locus tag: GFC30_3283
so part of: sequence
location: 18878..19711
location: region:18878-19711:1
so has part: feature:18878-19711:1:exon
subclass of: SO_0000010

position:18878:1
position: 18878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19711:1
position: 19711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18878-19711:1:exon

GFC30_RS15990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS15990
old locus tag: GFC30_3283
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNNWNMWWVKNEIFLSQLNLFGFLRLCDEESINFFLEQIETNKKYLSEYLNENYLDSKEINNWIKINRIPYADYTYAKDIHLYDEEKMLEYNMIKKHPDISFEFSGVCQCFPSQIINETVFDALTGYTEKRDKVHLFHILNKLLKSTKCIYMNFPSLKKTYPSNGARHTLDIFATHNNKILYLSPLLDDWEIVESFRYDDSLLIVTCTYERMQWKYRNHIFYRDILLELGHLKEILEFLNIRETKLNKKRNIVNEFNKCLKFRNFYTEVSCIYEIDR
SIO_010081: GFC30_RS15990
subclass of: SO_0000673
so part of: GFC30_RS15990
location: 18878..19711
location: region:18878-19711:1
so has part: feature:18878-19711:1:exon

WP_066328068.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18878-19711:1:exon

GFC30_RS15995
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS15995
old locus tag: GFC30_3284
so part of: sequence
location: 19695..20873
location: region:19695-20873:1
so has part: feature:19695-20873:1:exon
subclass of: SO_0000010

position:19695:1
position: 19695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20873:1
position: 20873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19695-20873:1:exon

GFC30_RS15995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS15995
old locus tag: GFC30_3284
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSIDSNIDKNIVILLISFCFLSVGDRIFQFYCIFFIFEYYPELIVLMTATLLIGNIIAFPLFKIIKTLTGDHNLFITALIIKCICYLTVPYFFENHFYFSFFLLAIESFMDIVTLPYIYGYIEKKIASSFYGVAAKIDLIDRLTLVSSPWITTAIIKYTPQSFIGVITSVCVLVSIFYFIKQKTENIQSVSEIKGLKSIWKNNLKLSKEIKLLLLVGIVTTFVTSPLLDVILPAVALIDIKSDNSLLMFASLEFILSTTFILANLTLVKIKPKEKYLISSILFMGTAYFLLALENFIIRVSSLVLLGFFFTMYKLNILNLYKNYTNKESFAEILLLRNSLLFIVASLSKLIVSTIISLTKKLEYLLIFNGFVLVFLTIYIYIYKPVVLVKR
SIO_010081: GFC30_RS15995
subclass of: SO_0000673
so part of: GFC30_RS15995
location: 19695..20873
location: region:19695-20873:1
so has part: feature:19695-20873:1:exon

WP_066328069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19695-20873:1:exon

GFC30_RS16000
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16000
old locus tag: GFC30_3285
so part of: sequence
location: 21209..21388
location: region:21209-21388:1
so has part: feature:21209-21388:1:exon
subclass of: SO_0000010

position:21209:1
position: 21209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21388:1
position: 21388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21209-21388:1:exon

GFC30_RS16000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16000
old locus tag: GFC30_3285
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAVGRTILEIIYYLLTRKEPYQELGADYWDRQREAKIVRQTVKKLEGLGYEVKVEKVGA
SIO_010081: GFC30_RS16000
subclass of: SO_0000673
so part of: GFC30_RS16000
location: 21209..21388
location: region:21209-21388:1
so has part: feature:21209-21388:1:exon

WP_066328070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21209-21388:1:exon

GFC30_RS17115
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS17115
so part of: sequence
location: complement(21556..21705)
location: region:21556-21705:-1
so has part: feature:21556-21705:-1:exon
subclass of: SO_0000010

position:21556:-1
position: 21556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21705:-1
position: 21705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21556-21705:-1:exon

GFC30_RS17115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS17115
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MERALAQAQEELALEKEREQAKVEIIPQVEYVLELYNKPDDLKLKKQPS
SIO_010081: GFC30_RS17115
subclass of: SO_0000673
so part of: GFC30_RS17115
location: complement(21556..21705)
location: region:21556-21705:-1
so has part: feature:21556-21705:-1:exon

WP_158512128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21556-21705:-1:exon

GFC30_RS16005
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16005
old locus tag: GFC30_3286
pseudo: true
so part of: sequence
location: complement(21903..>22196)
location: region:21903-22196:-1
so has part: feature:21903-22196:-1:exon
subclass of: SO_0000010

position:21903:-1
position: 21903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22196:-1
position: 22196
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21903-22196:-1:exon

GFC30_RS16005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16005
old locus tag: GFC30_3286
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014470719.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: sigma-70 family RNA polymerase sigma factor
SIO_010081: GFC30_RS16005
subclass of: SO_0000673
so part of: GFC30_RS16005
location: complement(21903..>22196)
location: region:21903-22196:-1
so has part: feature:21903-22196:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21903-22196:-1:exon

GFC30_RS16010
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16010
old locus tag: GFC30_3287
so part of: sequence
location: complement(22312..22872)
location: region:22312-22872:-1
so has part: feature:22312-22872:-1:exon
subclass of: SO_0000010

position:22312:-1
position: 22312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22872:-1
position: 22872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22312-22872:-1:exon

GFC30_RS16010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16010
old locus tag: GFC30_3287
inference: COORDINATES: protein motif:HMM:NF024241.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MCLLLSMVLQGTHAAYYNYGVIYLKHIGINSVYIGGILVLAVLAEIGFFYISNRVFTKFDVATMFLLAGIASIIRWSSVYFFENPLVFVFSQPLHALTFGLTHFAFMTFVNQYISKDKIPSAHGLYASLAMSLTTGVLTLVSGYLYLYSPGFPFLGMALVVAPSLFLCPMLKKLTRQSSTFQQLGA
SIO_010081: GFC30_RS16010
subclass of: SO_0000673
so part of: GFC30_RS16010
location: complement(22312..22872)
location: region:22312-22872:-1
so has part: feature:22312-22872:-1:exon

WP_274520113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22312-22872:-1:exon

GFC30_RS16015
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16015
old locus tag: GFC30_3289
pseudo: true
so part of: sequence
location: complement(22909..23787)
location: region:22909-23787:-1
so has part: feature:22909-23787:-1:exon
subclass of: SO_0000010

position:22909:-1
position: 22909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23787:-1
position: 23787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22909-23787:-1:exon

GFC30_RS16015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16015
old locus tag: GFC30_3289
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611795.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS982 family transposase
SIO_010081: GFC30_RS16015
subclass of: SO_0000673
so part of: GFC30_RS16015
location: complement(22909..23787)
location: region:22909-23787:-1
so has part: feature:22909-23787:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22909-23787:-1:exon

GFC30_RS16770
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16770
old locus tag: GFC30_3290
pseudo: true
so part of: sequence
location: <23893..24294
location: region:23893-24294:1
so has part: feature:23893-24294:1:exon
subclass of: SO_0000010

position:23893:1
position: 23893
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:24294:1
position: 24294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23893-24294:1:exon

GFC30_RS16770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16770
old locus tag: GFC30_3290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003214934.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: GFC30_RS16770
subclass of: SO_0000673
so part of: GFC30_RS16770
location: <23893..24294
location: region:23893-24294:1
so has part: feature:23893-24294:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23893-24294:1:exon

GFC30_RS16025
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16025
old locus tag: GFC30_3291
so part of: sequence
location: 24294..24734
location: region:24294-24734:1
so has part: feature:24294-24734:1:exon
subclass of: SO_0000010

position:24734:1
position: 24734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24294-24734:1:exon

GFC30_RS16025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16025
old locus tag: GFC30_3291
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010332152.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SMI1/KNR4 family protein
translation: MGYDFIKANKENSFYPVTKEEIEEVEKTLNLKFPNELVKFYLEVGYGFIKGSEFNINRIMDPYSVRDFRLRSNDFEFYPDIEIYDEFENNKLIFFEASESALMSIELSNKDENPIYYYDIQIATSLAEFLKKIEENDKYYLDLLAD
SIO_010081: GFC30_RS16025
subclass of: SO_0000673
so part of: GFC30_RS16025
location: 24294..24734
location: region:24294-24734:1
so has part: feature:24294-24734:1:exon

WP_066328080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24294-24734:1:exon

GFC30_RS16030
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16030
old locus tag: GFC30_3292
so part of: sequence
location: 25019..25711
location: region:25019-25711:1
so has part: feature:25019-25711:1:exon
subclass of: SO_0000010

position:25019:1
position: 25019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25711:1
position: 25711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25019-25711:1:exon

GFC30_RS16030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16030
old locus tag: GFC30_3292
inference: COORDINATES: protein motif:HMM:NF025768.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HNH/ENDO VII family nuclease
translation: MTVAGAMETAGFTALEAGGIVLSSTGVGAAVGAPATAIAAMGATHGATLAATEGSNFVQSAKELYQRMSRSEGVSGKVVKRADETEKFAKGTGNIISDNMKTRIPNNEIFAPNKRGNAPISKKDNRPIEIHHEGQNPNGSFHEMHASDHRFGENYKKNHPSYNEKSGIDRKQFIYMQLGSLTYFFDCRRQAKGLPASRVRVTENRTTSRLPDKFICLGAVLFDRPTVEKC
SIO_010081: GFC30_RS16030
subclass of: SO_0000673
so part of: GFC30_RS16030
location: 25019..25711
location: region:25019-25711:1
so has part: feature:25019-25711:1:exon

WP_066328081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25019-25711:1:exon

GFC30_RS16775
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16775
old locus tag: GFC30_3293
so part of: sequence
location: 25804..26376
location: region:25804-26376:1
so has part: feature:25804-26376:1:exon
subclass of: SO_0000010

position:25804:1
position: 25804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26376:1
position: 26376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25804-26376:1:exon

GFC30_RS16775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16775
old locus tag: GFC30_3293
inference: COORDINATES: protein motif:HMM:NF015638.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CbrC family protein
translation: MNANKYKFKYFMDPEANAEFTEENCQFCGTEENCLEGEYFDRGDEITSVCLGCLVKGETTVQIPQYLKDRLYTHLKNTFTEKSSEELNELFESIISELEKNPPVRWIQYNDWPVCDGDFMRYVGEWKQEDFNNASQNGNGKDYILSILDDLTKSRIDDIDVFWNDIGNYTAVFVFKCIHCNKIIGVAQSY
SIO_010081: GFC30_RS16775
subclass of: SO_0000673
so part of: GFC30_RS16775
location: 25804..26376
location: region:25804-26376:1
so has part: feature:25804-26376:1:exon

WP_158512144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25804-26376:1:exon

GFC30_RS16040
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16040
old locus tag: GFC30_3294
so part of: sequence
location: 26523..27059
location: region:26523-27059:1
so has part: feature:26523-27059:1:exon
subclass of: SO_0000010

position:26523:1
position: 26523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27059:1
position: 27059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26523-27059:1:exon

GFC30_RS16040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16040
old locus tag: GFC30_3294
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015865168.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: winged helix-turn-helix domain-containing protein
translation: MKRLKMTNDHGWTPRTLRKQERKIKDALLRARVTAVRLVMEGYLGKDVAKMVHLCRQSVALYVARFNEGGLDHLLDRRLPPGRMPFLTEEQQQEIRQLVLTTTPVDVGWGISSSWNTRILQSYIQQTYGVSMSREGIRKWLHRLRLSWTRPTDKLVKGDPTLQAAFEKELEFIKKMNH
SIO_010081: GFC30_RS16040
subclass of: SO_0000673
so part of: GFC30_RS16040
location: 26523..27059
location: region:26523-27059:1
so has part: feature:26523-27059:1:exon

WP_066328085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26523-27059:1:exon

GFC30_RS16045
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16045
old locus tag: GFC30_3295
so part of: sequence
location: 27064..27582
location: region:27064-27582:1
so has part: feature:27064-27582:1:exon
subclass of: SO_0000010

position:27064:1
position: 27064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27582:1
position: 27582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27064-27582:1:exon

GFC30_RS16045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16045
old locus tag: GFC30_3295
inference: COORDINATES: protein motif:HMM:NF033545.0
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MVLLHVDETHVRAYQALRTTWAEVGNQKQVPSYGHHAHVSIFGAVDVQQGDVVFHRASSANAETFLDFLRLLKEKYPDRFLVLVLDNARIHHANMVQAFLDCEEGGAFHFIFLPPYSPHLNPMERLWKWLKDEVIANVLHKDQNDIAQSITRFEQYVLQHPDEVLRRIGCAA
SIO_010081: GFC30_RS16045
subclass of: SO_0000673
so part of: GFC30_RS16045
location: 27064..27582
location: region:27064-27582:1
so has part: feature:27064-27582:1:exon

WP_066328087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27064-27582:1:exon

GFC30_RS16050
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16050
old locus tag: GFC30_3296
so part of: sequence
location: 27596..27937
location: region:27596-27937:1
so has part: feature:27596-27937:1:exon
subclass of: SO_0000010

position:27596:1
position: 27596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27937:1
position: 27937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27596-27937:1:exon

GFC30_RS16050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16050
old locus tag: GFC30_3296
inference: COORDINATES: protein motif:HMM:NF014717.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FtsX-like permease family protein
translation: MSIWMYIERTREIGILKALGAFRSDIRRIFVAKGMLIGIIGGLFGILGSIAVGKGANYIVTTVMKKSNLDIFQFSFIQVVLLVIFSGLLGILASFVPANKAAKQPAVEALRYE
SIO_010081: GFC30_RS16050
subclass of: SO_0000673
so part of: GFC30_RS16050
location: 27596..27937
location: region:27596-27937:1
so has part: feature:27596-27937:1:exon

WP_238583593.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27596-27937:1:exon

GFC30_RS16055
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16055
old locus tag: GFC30_3297
so part of: sequence
location: 28432..28782
location: region:28432-28782:1
so has part: feature:28432-28782:1:exon
subclass of: SO_0000010

position:28432:1
position: 28432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28782:1
position: 28782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28432-28782:1:exon

GFC30_RS16055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16055
old locus tag: GFC30_3297
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008881588.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLKKIGWLFLGGIAVFVLMFHLGPLVALAISLAILYYAVKKFFKADSAFGKIVWALIGLAALMASVSNVPALIAIVAAYVLYVVYKKWNEPKEVVQVVDDPFVHFEKQWAELQKHY
SIO_010081: GFC30_RS16055
subclass of: SO_0000673
so part of: GFC30_RS16055
location: 28432..28782
location: region:28432-28782:1
so has part: feature:28432-28782:1:exon

WP_026011457.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28432-28782:1:exon

GFC30_RS16060
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16060
old locus tag: GFC30_3298
so part of: sequence
location: 28797..29420
location: region:28797-29420:1
so has part: feature:28797-29420:1:exon
subclass of: SO_0000010

position:28797:1
position: 28797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29420:1
position: 29420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28797-29420:1:exon

GFC30_RS16060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16060
old locus tag: GFC30_3298
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015373947.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PspA/IM30 family protein
translation: MGLLSRVKTMIAADIHEWLDEKEKKNPIAVLNEYLRQCEQEVEKVRKLLERQYLLKEQFTREYREAMQLAEKRKKQADIASKAGESELFAFASHEQMQYEERAMRLKQLLEQTNEQLLELEKKYEQMKHQLKDMHMRRMELMGRENIARAHYRMNRILDGYTSPALSTFADTESYLERLEQRVQSDYYRHTIDARIAELEKRLQQEQ
SIO_010081: GFC30_RS16060
subclass of: SO_0000673
so part of: GFC30_RS16060
location: 28797..29420
location: region:28797-29420:1
so has part: feature:28797-29420:1:exon

WP_066328090.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28797-29420:1:exon

GFC30_RS16065
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
gene: liaF
locus tag: GFC30_RS16065
old locus tag: GFC30_3299
so part of: sequence
location: 29548..30219
location: region:29548-30219:1
so has part: feature:29548-30219:1:exon
subclass of: SO_0000010

position:29548:1
position: 29548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30219:1
position: 30219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29548-30219:1:exon

GFC30_RS16065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
gene: liaF
locus tag: GFC30_RS16065
old locus tag: GFC30_3299
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009362394.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell wall-active antibiotics response protein LiaF
translation: MMLAFEISFFHPGIVFSVLFSAWLIYIGRKKWHRKLGKIVFWLGCLGLVVHVFTMITVRFLLVALLFYAIIQFAQSKRHPIVIRPERKTSDRETEGVFRQPLFQNMLFGRQKTPEHAYEWSDVNIQTGIGDTVVDLSYAVVPKGEAVIVIRGWIGNVHIFVPYEMEVSVVHSVLFGAASIFSRETERLWNQTFIYQTPAYETAEQKLKIITSMAIGNVEVKRI
SIO_010081: GFC30_RS16065
subclass of: SO_0000673
so part of: GFC30_RS16065
location: 29548..30219
location: region:29548-30219:1
so has part: feature:29548-30219:1:exon

WP_066328132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29548-30219:1:exon

GFC30_RS16070
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16070
old locus tag: GFC30_3300
so part of: sequence
location: 30216..31223
location: region:30216-31223:1
so has part: feature:30216-31223:1:exon
subclass of: SO_0000010

position:30216:1
position: 30216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31223:1
position: 31223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30216-31223:1:exon

GFC30_RS16070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16070
old locus tag: GFC30_3300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019416555.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sensor histidine kinase
translation: MSRHIVGALLLAFTVSVVLFLSYVFTFPPAEWSVLWNETVLGVPFVVFLFMASGFIGVLFGVSFDWFWRKQWRAIEHALLQIEQGNTELSRQHTAKELGDVWERIDKLQKHWFEQTKLTQKLVTEKVENEEELIERIISEERNRLARELHDSVSQQLFAASMMMSALMETYAGNEQAKKQLKLVEQMIHQSQLEMRALLLHLRPVQLKGKSLQDGIRELLTELAQKLPMEMKWKIEDVALDRGVEDHLFRILQESVSNTLRHAKATMLEVLLLERDGFVILRVSDDGVGFDVERTKSGSYGLQHMYERAAEIGGTLKIVSVKNKGTRLEVKVPLV
SIO_010081: GFC30_RS16070
subclass of: SO_0000673
so part of: GFC30_RS16070
location: 30216..31223
location: region:30216-31223:1
so has part: feature:30216-31223:1:exon

WP_066328092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30216-31223:1:exon

GFC30_RS16075
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16075
old locus tag: GFC30_3301
so part of: sequence
location: 31237..31863
location: region:31237-31863:1
so has part: feature:31237-31863:1:exon
subclass of: SO_0000010

position:31237:1
position: 31237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31863:1
position: 31863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31237-31863:1:exon

GFC30_RS16075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16075
old locus tag: GFC30_3301
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015373952.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MIKILLVDDHEMVRLGVSAYLSAQPDMEVVGEAESGEKGVELALQLRPDIILMDLVMEPMDGIEATKQIISAWPEAKIMIVTSFLDDDKVYPAIEAGAVSYMLKTSKASEIANAIRATFHGQSVFEPEVTGKMMSSRRKQSLPHEQLTSREMEVLLLMAQGKTNQEIAEELFISLKTVKVHVSNILAKLDVQDRTQAVIYAFKHGLVK
SIO_010081: GFC30_RS16075
subclass of: SO_0000673
so part of: GFC30_RS16075
location: 31237..31863
location: region:31237-31863:1
so has part: feature:31237-31863:1:exon

WP_066328095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31237-31863:1:exon

GFC30_RS16080
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16080
old locus tag: GFC30_3302
so part of: sequence
location: 31929..32714
location: region:31929-32714:1
so has part: feature:31929-32714:1:exon
subclass of: SO_0000010

position:31929:1
position: 31929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32714:1
position: 32714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31929-32714:1:exon

GFC30_RS16080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16080
old locus tag: GFC30_3302
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006322497.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MerR family transcriptional regulator
translation: MKLSGGERVEYTVQQLAKLAGVTSRTLRYYDEIGLLKPARVNASGYRIYGAKEVDQLQQILFYRELGVDLETIKQIITSPSFDDVQALKQHREKLLAERRRLEGLIANVEKTLLAKEGRTMMSDKEKFEAFKQQLIDENERKYGKEIREKYGEEQVNKSNAKVKNMTPAQYEEATKLGEEVLRILQEAFLTGDPAGELAQKAADLHRQWLGYFWDHYSKEAHAGLAQMYVDDERFKAYYDQKQLGTAEFFREAIFIYTGKK
SIO_010081: GFC30_RS16080
subclass of: SO_0000673
so part of: GFC30_RS16080
location: 31929..32714
location: region:31929-32714:1
so has part: feature:31929-32714:1:exon

WP_066328133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31929-32714:1:exon

GFC30_RS16085
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16085
old locus tag: GFC30_3303
so part of: sequence
location: complement(32770..34710)
location: region:32770-34710:-1
so has part: feature:32770-34710:-1:exon
subclass of: SO_0000010

position:32770:-1
position: 32770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34710:-1
position: 34710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32770-34710:-1:exon

GFC30_RS16085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16085
old locus tag: GFC30_3303
EC number: 2.7.8.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003247697.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LTA synthase family protein
translation: MKGLSNIKWLQRWSDTHLRFFILAVFLFWMKTYAAYRIEFNLGISNALQKWLLFINPISSAIFFFGLALFAKGKRSYIWLIIIDFVLSFILYANIVYYRFFSDFITFPTLTQTSNFGSLGGSILELLKWHDVIYLIDIIVLALLIVKERANLQPISLGRHKKNLLFATAVFTFVTNLALAEIDRPQLLTRTFDRSYIVKYLGMYNYVIYDAIQSLKSSTQRAFANKSDVTTVLNHVQATYAKPSPAYFGKGKGMNVIYIHLESFQNFLINYKLNGQEVTPFLNSLTHEKNTMYFDNFFHQTGQGKTSDAEFMLENSLFGLPQGSVFTTKAQNTYQAAPAILGQHGYTSAVFHGNYKTFWNRNEIYKSFGFDHFFDASYYDMNDQDVLNYGLKDKPFFRESIPLLQTLKEPFYVKFITLSNHFPYLIDENEATIPPATTGDGSVDRYFQTARYLDEAVKEFFDYLKQSGLYDRSIIILYGDHYGISDNHNEAMAQIIGKEITPFEHTQLQRVPLFIRVPGVKGGVMHQYGGDIDVLPTVLHLLGIDTKNYIQFGTDLLSPEHQQIVPFRNGDFITPTVTAVDGKYYNTQTGEQIEKNAEIDRDEQIVRTKLSLSDKVVYEDLLRFYTPKGFKPVDRSKYDYNHHEEK
SIO_010081: GFC30_RS16085
subclass of: SO_0000673
so part of: GFC30_RS16085
location: complement(32770..34710)
location: region:32770-34710:-1
so has part: feature:32770-34710:-1:exon

WP_066328098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32770-34710:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 294699
regulatory class: riboswitch
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF00379
inference: COORDINATES: profile:INFERNAL:1.1.1
note: cyclic di-AMP (ydaO/yuaA leader) riboswitch senses the signaling molecule cyclic di-AMP; Derived by automated computational analysis using gene prediction method: cmsearch.
bound moiety: cyclic di-AMP
so part of: sequence
location: 35487..35626
location: region:35487-35626:1
so has part: feature:35487-35626:1:region

position:35487:1
position: 35487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35626:1
position: 35626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35487-35626:1:region

GFC30_RS16090
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16090
old locus tag: GFC30_3305
so part of: sequence
location: 35724..37559
location: region:35724-37559:1
so has part: feature:35724-37559:1:exon
subclass of: SO_0000010

position:35724:1
position: 35724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37559:1
position: 37559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35724-37559:1:exon

GFC30_RS16090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16090
old locus tag: GFC30_3305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020278933.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: APC family permease
translation: MASVKRLLIGSPMETKRLKHEKLPKWKALAVFSSDALSSVAYATEEILLVLMLLGTGVFFFSLPIALAILVLLVVVTLSYRQIIYAFPSGGGAYVVARDHLSTTTSLVAGAALMIDYLLTVAVSISSGVAALTSAFPSLLPWKVDIALALVLLLMILNLRGITESATVFAYPTYLFIISVLVLIAVGGWQLWHEGWHGFNYQEHATATHFFSSGYGIFILLRAFASGCSAMTGVEAISNGVPSFKPDSSKNASITMGWMSFLLGTMFLGITILAAGFGVVPLQDKTVISQIGQHVFGNSIFFYLFQMVTMLILVLAANTSFAGFPQLVSVIANDRFLPRSLSARGDRLVFSNGIILLSVLAMILIVMFHGETHSLIPLYAVGVFLSFTIGQFGMVKKLWKEKNGRSTVTIATIMTGMIVTGLVTIITVVAKFTQGAWLVMISIPLLVVLFYKIRAHYDKLGEQLRLDEQEWKRREKIVEPKVIIPISGVSKVVAQSLQYARSISQDITAISIIFHEEEERKLREKWEKFHPDIELKVIYSPYRTILSPMLDYINEVEKQTKGAPITILMPQFIVKKWWHTLLHNQTAILLRFFLILKKDIVIATIPYHLKE
SIO_010081: GFC30_RS16090
subclass of: SO_0000673
so part of: GFC30_RS16090
location: 35724..37559
location: region:35724-37559:1
so has part: feature:35724-37559:1:exon

WP_066328099.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35724-37559:1:exon

GFC30_RS16095
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
gene: ytaF
locus tag: GFC30_RS16095
old locus tag: GFC30_3306
so part of: sequence
location: 37679..38335
location: region:37679-38335:1
so has part: feature:37679-38335:1:exon
subclass of: SO_0000010

position:37679:1
position: 37679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38335:1
position: 38335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37679-38335:1:exon

GFC30_RS16095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
gene: ytaF
locus tag: GFC30_RS16095
old locus tag: GFC30_3306
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003247702.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0030436 - asexual sporulation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sporulation membrane protein YtaF
translation: MLKYVSMMMLALAVSLDSLSVGVTYGMRKMKFPLSSLVVIALFSGFMLLMSMYVGSFLVLLLPVRVEKAIAACILVAIGVWAIYNVLKKREDELEEMVPRPATTMKIWRVHLKRLGIVIQILKRPSLADLDGSGSISMNEALLIGFALSMDAFGAGLSASLLGYSPLMLALLVSLLNMLFIHFGLKTGYTFAKTKIMKKATVIPGVILICLGISKIFF
SIO_010081: GFC30_RS16095
subclass of: SO_0000673
so part of: GFC30_RS16095
location: 37679..38335
location: region:37679-38335:1
so has part: feature:37679-38335:1:exon

WP_066328101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37679-38335:1:exon

GFC30_RS16100
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16100
old locus tag: GFC30_3307
so part of: sequence
location: 38439..39419
location: region:38439-39419:1
so has part: feature:38439-39419:1:exon
subclass of: SO_0000010

position:38439:1
position: 38439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39419:1
position: 39419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38439-39419:1:exon

GFC30_RS16100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16100
old locus tag: GFC30_3307
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003247704.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sporulation protein
translation: MFKKFLSKLGIGSAKINLVLHQPYARVGEKIEGEFFIEGGITEQHIRKLDVELQLIVHANGQHYRQTVAVIPVASSFMLHPGERKVLPFVYTLPLHLPVTRYGVEYVFVTRLDIADGVDAVDEDSIRILPPVPLEKLFYALDKLGFREKPISGKITAHGQEFAFFPTESFRGVIQEIECFAFFEEHGIRLQLEVDVLNGILGFSERELKRDVFFSYDEVNDVEGLAQKWHMLLQEMVHQPQMYAHSSYISHQPHVPHDPGYYHTYPSRHHGHGMMGAIGGFAAGMLAGMVAEELIEDVVEDAFDAGDRVEDMVGDWFDGDDDIDIL
SIO_010081: GFC30_RS16100
subclass of: SO_0000673
so part of: GFC30_RS16100
location: 38439..39419
location: region:38439-39419:1
so has part: feature:38439-39419:1:exon

WP_066328134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38439-39419:1:exon

GFC30_RS16105
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16105
pseudo: true
so part of: sequence
location: 39666..>40380
location: region:39666-40380:1
so has part: feature:39666-40380:1:exon
subclass of: SO_0000010

position:39666:1
position: 39666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40380:1
position: 40380
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39666-40380:1:exon

GFC30_RS16105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611795.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS982 family transposase
SIO_010081: GFC30_RS16105
subclass of: SO_0000673
so part of: GFC30_RS16105
location: 39666..>40380
location: region:39666-40380:1
so has part: feature:39666-40380:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39666-40380:1:exon

GFC30_RS16110
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16110
old locus tag: GFC30_3309
pseudo: true
so part of: sequence
location: complement(40517..>41692)
location: region:40517-41692:-1
so has part: feature:40517-41692:-1:exon
subclass of: SO_0000010

position:40517:-1
position: 40517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41692:-1
position: 41692
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40517-41692:-1:exon

GFC30_RS16110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16110
old locus tag: GFC30_3309
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008881895.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS1634 family transposase
SIO_010081: GFC30_RS16110
subclass of: SO_0000673
so part of: GFC30_RS16110
location: complement(40517..>41692)
location: region:40517-41692:-1
so has part: feature:40517-41692:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40517-41692:-1:exon

GFC30_RS16115
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16115
old locus tag: GFC30_3310
so part of: sequence
location: complement(41918..42568)
location: region:41918-42568:-1
so has part: feature:41918-42568:-1:exon
subclass of: SO_0000010

position:41918:-1
position: 41918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42568:-1
position: 42568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41918-42568:-1:exon

GFC30_RS16115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16115
old locus tag: GFC30_3310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020754796.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MDEPLFSLQNLTYSYDGKTLIFDQFSFDVLKGETIFLTGPNGVGKTTLLQIIAGLLSNGHLTYRAYYKGNPVQLVAIRRYISYVTAEPPLFSKLTGYENIECFRLLWRLDRTYYQKVEAICHTLGMADWLALPVDQYSLGTLQKLHIAIALGRPVELYLMDEPFNSLDVTSRDILAEWIQTDNRASYIIASHVHQDKFPSARVLTLARPVRKEGIW
SIO_010081: GFC30_RS16115
subclass of: SO_0000673
so part of: GFC30_RS16115
location: complement(41918..42568)
location: region:41918-42568:-1
so has part: feature:41918-42568:-1:exon

WP_044730626.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41918-42568:-1:exon

GFC30_RS16120
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16120
old locus tag: GFC30_3311
so part of: sequence
location: complement(42580..43092)
location: region:42580-43092:-1
so has part: feature:42580-43092:-1:exon
subclass of: SO_0000010

position:42580:-1
position: 42580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43092:-1
position: 43092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42580-43092:-1:exon

GFC30_RS16120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16120
old locus tag: GFC30_3311
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013146155.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: stage II sporulation protein M
translation: MIGRTIRSHLPYFCVSLAVYGICFAFGAVIVSEKLTIHPTSMAFWPTLAHNFMVGAILMFGGWLTLGVVNTVYLAYNAAMLGAIVKGVMKGYGLHPIITGILPHGITEIMSHLLFCTLGYETWRLLHIVKKRARAEETEPLHIRDVVLLFTAASILLVISALIEATVSHA
SIO_010081: GFC30_RS16120
subclass of: SO_0000673
so part of: GFC30_RS16120
location: complement(42580..43092)
location: region:42580-43092:-1
so has part: feature:42580-43092:-1:exon

WP_044730625.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42580-43092:-1:exon

GFC30_RS16125
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16125
old locus tag: GFC30_3312
so part of: sequence
location: complement(43089..44708)
location: region:43089-44708:-1
so has part: feature:43089-44708:-1:exon
subclass of: SO_0000010

position:43089:-1
position: 43089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44708:-1
position: 44708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43089-44708:-1:exon

GFC30_RS16125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16125
old locus tag: GFC30_3312
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013523110.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MWLFYQQMRRSSIAPLQKKLLLSPKGALFVAEGGKWLLSCCLVIIVCSRSSVFGSSFTIGLLLLLATSPFIAVLLDSGEKLQRDYHYDYLRLSSEQDDVVWRRLVVIHYVSYMLRMLPTVFPPSVALIVKLGWVGAELVWFGQATLFFLYVMSHVMRGTKFGGRRVFSGVLSCFFSLAVGYMVMIPIVSLLQLSRHAVKTYGLSISYLAYMDGQFAKWQQWIHERVFTWHGMVGLNGGVLAASGLAIAAFALGSLRSVRACVEAKTYVLYKWYQRVIQSSWQPASENALLYKDTCLLMRKASQLDKPPLLLFLPGEWFLVTGANIALFPFIHNLFVICFLCLFEMYIVMTGTLRAVASTFSQVFLFESDIERLLVFRLLDPPPLVQLIQAKWTLLRRIGVYPCAAALGLLAIEWVGWFRGNALIVVLLSIIIMPLYPLVIKRILRTDYEVFCFLLSSGEKVELASPRDYAGYMVVAAGNHLFHRLFTYVTIFSSLISAFFVLLRGEQWGWYSTLFVIALYIVLWGSTRYSIDRRKDGKG
SIO_010081: GFC30_RS16125
subclass of: SO_0000673
so part of: GFC30_RS16125
location: complement(43089..44708)
location: region:43089-44708:-1
so has part: feature:43089-44708:-1:exon

WP_238583594.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43089-44708:-1:exon

GFC30_RS16130
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16130
old locus tag: GFC30_3313
so part of: sequence
location: complement(44789..45019)
location: region:44789-45019:-1
so has part: feature:44789-45019:-1:exon
subclass of: SO_0000010

position:44789:-1
position: 44789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45019:-1
position: 45019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44789-45019:-1:exon

GFC30_RS16130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16130
old locus tag: GFC30_3313
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011230222.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uberolysin/carnocyclin family circular bacteriocin
translation: MSLLALVAGTLGVSQAVATTVVSIVLTGSTLVSIILGITAILSGGVDAILEIGWSTFVATVKKIVTERGKAAAIAW
SIO_010081: GFC30_RS16130
subclass of: SO_0000673
so part of: GFC30_RS16130
location: complement(44789..45019)
location: region:44789-45019:-1
so has part: feature:44789-45019:-1:exon

WP_044730624.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44789-45019:-1:exon

GFC30_RS17120
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS17120
so part of: sequence
location: complement(45044..45217)
location: region:45044-45217:-1
so has part: feature:45044-45217:-1:exon
subclass of: SO_0000010

position:45044:-1
position: 45044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45217:-1
position: 45217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45044-45217:-1:exon

GFC30_RS17120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS17120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013146158.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKWSWPLFIVITMPFLLLIAIAFVLKEFQSPLWMKIADIVLVLAYGIVYSRLLRKLR
SIO_010081: GFC30_RS17120
subclass of: SO_0000673
so part of: GFC30_RS17120
location: complement(45044..45217)
location: region:45044-45217:-1
so has part: feature:45044-45217:-1:exon

WP_158512145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45044-45217:-1:exon

GFC30_RS16135
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16135
old locus tag: GFC30_3314
pseudo: true
so part of: sequence
location: 45388..46267
location: region:45388-46267:1
so has part: feature:45388-46267:1:exon
subclass of: SO_0000010

position:45388:1
position: 45388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46267:1
position: 46267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45388-46267:1:exon

GFC30_RS16135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16135
old locus tag: GFC30_3314
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015863990.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS982 family transposase
SIO_010081: GFC30_RS16135
subclass of: SO_0000673
so part of: GFC30_RS16135
location: 45388..46267
location: region:45388-46267:1
so has part: feature:45388-46267:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:45388-46267:1:exon

GFC30_RS16140
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16140
old locus tag: GFC30_3315
so part of: sequence
location: complement(46473..47552)
location: region:46473-47552:-1
so has part: feature:46473-47552:-1:exon
subclass of: SO_0000010

position:46473:-1
position: 46473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47552:-1
position: 47552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46473-47552:-1:exon

GFC30_RS16140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16140
old locus tag: GFC30_3315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012685998.1
GO function: GO:0050511 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
translation: MTLKKIILTGGGTAGHVMVNVALIPKLKERGWNVCYIGSHHGIERELIAQQSDVPYFPISTGKLRRYFDWNNFKDPFKVMKGTWEAYRLIRKEKPDIVFSKGGFVSVPVIIGAWLNGVPVIIHESDMTPGLANKLAMPFATKVCVTFPETLQHVSKEKGIYVGAAVRDELKQGNADKGRMYCQFTNDKPVLLVMGGSLGSKRINDALRANLQTLLADFQIVHICGKGNVDAQLNQKGYKQFEYVHDELPHLLAMADIVLSRAGSNSIFEFLTLKKPMLLIPLSKGASRGDQILNARSFEKAGYAKVLMEEDLTNDSLREAIYQLYRDKERYIENMNNSQATDALHTLLSLIEEAGKGKQ
SIO_010081: GFC30_RS16140
subclass of: SO_0000673
so part of: GFC30_RS16140
location: complement(46473..47552)
location: region:46473-47552:-1
so has part: feature:46473-47552:-1:exon

WP_148660450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46473-47552:-1:exon

GFC30_RS16145
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16145
old locus tag: GFC30_3316
so part of: sequence
location: 47693..48415
location: region:47693-48415:1
so has part: feature:47693-48415:1:exon
subclass of: SO_0000010

position:47693:1
position: 47693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48415:1
position: 48415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47693-48415:1:exon

GFC30_RS16145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16145
old locus tag: GFC30_3316
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012748954.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polysaccharide deacetylase family protein
translation: MNWLALFLCVVIVYGIVPTVVIRQTGIGIYKRGKYTKAVALTFDDGPNPYYTPQLLDLLKKHGIKATFFLVGTKAKQHPQLVKRMQEEGHDIGLHNYRHISNWFIFPPFLQRGLQKSADIIEQITGKRPIYYRPPWGHLNLCTWTVQKKYVIVMWTAILGDWRERLGVPALVRRLKKSLKDGAIIVLHDSGETFGADEKAPEHMIQALQQLFEDEAAKNVQWMTISEMIAAQTKKQTRAI
SIO_010081: GFC30_RS16145
subclass of: SO_0000673
so part of: GFC30_RS16145
location: 47693..48415
location: region:47693-48415:1
so has part: feature:47693-48415:1:exon

WP_066328105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47693-48415:1:exon

GFC30_RS16150
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16150
old locus tag: GFC30_3317
so part of: sequence
location: 48424..49020
location: region:48424-49020:1
so has part: feature:48424-49020:1:exon
subclass of: SO_0000010

position:48424:1
position: 48424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49020:1
position: 49020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48424-49020:1:exon

GFC30_RS16150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16150
old locus tag: GFC30_3317
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013522795.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DedA family protein
translation: MDISTLLSYIQSYGYGIIFVFLFLGIVGIPAPEESLLFFLGMLISHHQLAWANCFLVSWLGATIGMIAGYGMGRFLGHPFVKKYGKYVGIKEDKWERASGLFHKYGKWFVLFGFYLPGVRQISPYMAGVIRFPFPLFLLLASIGALLWIVPIMSIGMFLSQHLDIPIASVPLIGAALFLLFLAAVWIKQLVGKKQFEN
SIO_010081: GFC30_RS16150
subclass of: SO_0000673
so part of: GFC30_RS16150
location: 48424..49020
location: region:48424-49020:1
so has part: feature:48424-49020:1:exon

WP_066328108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48424-49020:1:exon

GFC30_RS16155
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16155
old locus tag: GFC30_3318
so part of: sequence
location: 49035..50171
location: region:49035-50171:1
so has part: feature:49035-50171:1:exon
subclass of: SO_0000010

position:49035:1
position: 49035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50171:1
position: 50171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49035-50171:1:exon

GFC30_RS16155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16155
old locus tag: GFC30_3318
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011229732.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: galactosyldiacylglycerol synthase
translation: MMKVLVLPLFQMSSGHHKVADALIDFLQTKFPFVHCRKLDFLSYCNEYIEKFVSDVYLRWIRSHPASYHHIYKMLMYRDVPKMDWVHLEPWLPYFEHKMKRLIEAEKPQLIICTHSFPSRILQRLKRKKWLTTPVINVYTDFFMNGVWGKKGIDYHFVPHQEAKEELIKKYKIAKEQVIVTGIPVHETFMSKKGGGRGSKQRLHLLIAGGNQGLGNISDFFRKMNGTNQFRYSVLCGHNRALYEEVLRWKQPHIRPLPYIASIDEMNRLYEEADAIITKPGGVTVSEALHKRLPLFTISYLPGQEQINLRYLEERGLIYNLSGLRHYEQKIWHVLHDDMERSRFLRRVAEYFAQIEQSAQEALQQIVWQYSKTHVWSH
SIO_010081: GFC30_RS16155
subclass of: SO_0000673
so part of: GFC30_RS16155
location: 49035..50171
location: region:49035-50171:1
so has part: feature:49035-50171:1:exon

WP_066328110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49035-50171:1:exon

GFC30_RS16160
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16160
old locus tag: GFC30_3319
so part of: sequence
location: 50315..51403
location: region:50315-51403:1
so has part: feature:50315-51403:1:exon
subclass of: SO_0000010

position:50315:1
position: 50315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51403:1
position: 51403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50315-51403:1:exon

GFC30_RS16160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16160
old locus tag: GFC30_3319
EC number: 6.3.2.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019416575.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0008716 - D-alanine-D-alanine ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-alanine--D-alanine ligase
translation: MKTRIGVLYGGKSPEHKVSLQTAMAVMNAIDKAKFDVIPIYITTEGQWVKGEKLTGSVHDVKQLQLAPKERAILPVALNQTSIAEETNGPTEDTIDVIFPLLHGPNGEDGTVQGLLELLNIPYVGNGVLASAAGMDKVIMKNLFAQAGLRQAKYVSFLKKEWQQNEEAAYDKVESELGYPCFIKPANAGSSVGISKCKKREELKQAFMDAFRYDRKVIVEEAIVGREVEIGVIGNDDPVCSVVGEIVPKKEFYDYQAKYEDGNTELIIPADITDEEYKTIQQMAIVAFKALDLSGLVRADFFLTKDGVVYINEVNTMPGFTPFSMFPLLWKHSGVSYPELIEKLVQLALERHQEKQTITYTF
SIO_010081: GFC30_RS16160
subclass of: SO_0000673
so part of: GFC30_RS16160
location: 50315..51403
location: region:50315-51403:1
so has part: feature:50315-51403:1:exon

WP_066328112.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50315-51403:1:exon

GFC30_RS16165
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16165
old locus tag: GFC30_3320
so part of: sequence
location: 51416..52789
location: region:51416-52789:1
so has part: feature:51416-52789:1:exon
subclass of: SO_0000010

position:51416:1
position: 51416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52789:1
position: 52789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51416-52789:1:exon

GFC30_RS16165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16165
old locus tag: GFC30_3320
EC number: 6.3.2.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013144040.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
translation: MITKTLRTIQDMVDGFGLDESFYDVMITGISTDTRTMERGNLYIPLKGATFNGHAFVEEAFAKGASAVLWSREEANPPVDVPLIMVDDTLQALQRLAHRYRKQLSVKVIGITGSNGKTTTKDMVFSLLATTYKTQKTEGNLNNHIGLPLTLLRLEEDTEMAVVEMGMSGFGEIERLSHIAEPDVAVITNIGESHLQELGSREGIAQAKLEILSGLQKDGVFVYYGDEPLLRTKIEQLSPVFHTITFGQTPENNYYPLSMALTAEGTTFTVNAAREISFQLPILGKHHVQNALAAIAVARVFGIEWETIQKAFATLQTTRMRMELEKGKTGVTIINDAYNASPTSMKAALQLLSELTGYDKKIAVLGDMLELGAQEVEFHRQIGEILTPASVDYVWTYGKLAREIALTAQPAFPHGRVRAYDDKQALANDLCALVTEKDVVLFKGSRGMKLEEIIRAL
SIO_010081: GFC30_RS16165
subclass of: SO_0000673
so part of: GFC30_RS16165
location: 51416..52789
location: region:51416-52789:1
so has part: feature:51416-52789:1:exon

WP_066328114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51416-52789:1:exon

GFC30_RS16170
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16170
old locus tag: GFC30_3321
so part of: sequence
location: 53103..54473
location: region:53103-54473:1
so has part: feature:53103-54473:1:exon
subclass of: SO_0000010

position:53103:1
position: 53103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54473:1
position: 54473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53103-54473:1:exon

GFC30_RS16170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16170
old locus tag: GFC30_3321
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015864091.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1380 family transposase
translation: MKDFPIRFVWTDEAITPSAGLALVGYLLHQTKLDKRLNVLRLPQVRRDVHISHGDVIRSMIGLLATGKTDFDHIEAYRHDDLFATSLGIEHVPSSPTLRQRLDQLACLPMTDTILWEESMRLLRRRQATLSPCWTKQKTTWVPLDLDGSPFDNSDTKKEGVSRTYKGFDGFTPLFAYAGKEGYIVHAELRPGKQHVQDGMPSFLTTAIHRARALTSSRLLVRMDAGNDAEANVRVCLEEGVDFVIKRNLRRESKALWFPIASQKGKRTDDSTEGVQTYELCLPQTMTIDGNTHTYFQVTQVTERTMERNGQLLFVPDYEVESYWVRLEGYDHMHMQDILALYHDHATCEQFHSELKSDLDLERLPSGKMKTNALVLVIGALVYNLLRLIGQDILSDPRHPLHHKVRRRRIKTIIQTVITMAGRLVRRSRQIWMKLTRRSGYSEPLLNVYMKWREGR
SIO_010081: GFC30_RS16170
subclass of: SO_0000673
so part of: GFC30_RS16170
location: 53103..54473
location: region:53103-54473:1
so has part: feature:53103-54473:1:exon

WP_066323190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53103-54473:1:exon

GFC30_RS16175
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16175
old locus tag: GFC30_3322
so part of: sequence
location: 54829..56244
location: region:54829-56244:1
so has part: feature:54829-56244:1:exon
subclass of: SO_0000010

position:54829:1
position: 54829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56244:1
position: 56244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54829-56244:1:exon

GFC30_RS16175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16175
old locus tag: GFC30_3322
EC number: 3.6.4.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014194681.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase
translation: MTTFHELGLSNDVMKAISRMGFEETTPIQAETIPLSLQNKDVIGQAQTGTGKTAAFGIPLVEKIDTKQDVVQGLVVAPTRELAIQVSEELYKIGAIKRVRVLPIYGGQDIERQIRALKKRPHIIVGTPGRIIDHINRKTLRLEHVHTVVLDEADEMLNMGFVEDIEAILSNVPTERQTLLFSATMPEPIRRIAERFMNNPHLVKVKAKEMTVPNIEQYYLEVQEKKKFDILTRLLDIQAPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGSIEILVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVAMTFVTPREIGQLHNIERTTKRKMERMKPPTLDEALEGQQRLAIEKLLSIVENENLSFYKQAAEELLEEHDSVSLVAACIKMLTKEPDTTPVKLTEEPPLPAKKEKKRVNRKSGQPTEATRNRQPKKRRVAR
SIO_010081: GFC30_RS16175
subclass of: SO_0000673
so part of: GFC30_RS16175
location: 54829..56244
location: region:54829-56244:1
so has part: feature:54829-56244:1:exon

WP_066328115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54829-56244:1:exon

GFC30_RS16180
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16180
old locus tag: GFC30_3323
so part of: sequence
location: complement(56290..56880)
location: region:56290-56880:-1
so has part: feature:56290-56880:-1:exon
subclass of: SO_0000010

position:56290:-1
position: 56290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56880:-1
position: 56880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56290-56880:-1:exon

GFC30_RS16180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16180
old locus tag: GFC30_3323
EC number: 3.4.21.-
inference: COORDINATES: protein motif:HMM:NF013827.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rhomboid family intramembrane serine protease
translation: MFIRTESPLTFIRSYPIVSIIVAVNLVVFLFTVIPHPLADRFLDTFVGFNAAIAKGEYWRLATSLFLHAQFGHVVANSFSLLLFGPALEKTIGKKLFLVTYVGSGILANVATFCFAPIIYSHLGASGAIFGILGVYSYLALFHPQLVHRENARIVFGALVAGFAMTFTFPHMNTIAHLFGFFSGAILAPFVVVRLN
SIO_010081: GFC30_RS16180
subclass of: SO_0000673
so part of: GFC30_RS16180
location: complement(56290..56880)
location: region:56290-56880:-1
so has part: feature:56290-56880:-1:exon

WP_066328116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56290-56880:-1:exon

GFC30_RS16185
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
gene: acpS
locus tag: GFC30_RS16185
old locus tag: GFC30_3324
so part of: sequence
location: 56946..57302
location: region:56946-57302:1
so has part: feature:56946-57302:1:exon
subclass of: SO_0000010

position:56946:1
position: 56946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57302:1
position: 57302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56946-57302:1:exon

GFC30_RS16185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
gene: acpS
locus tag: GFC30_RS16185
old locus tag: GFC30_3324
EC number: 2.7.8.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011983363.1
GO function: GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO process: GO:0008610 - lipid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: holo-ACP synthase
translation: MIIGVGIDIIELARIEKFIAKEKFIARILTEREKTLLARLSGRRKVEFLAGRFAAKEAYAKALGTGIGKEVSFQDIEVINDEYGKPAIVSPTEHQVHVSISHSQEYAVAQVIIERLSC
SIO_010081: GFC30_RS16185
subclass of: SO_0000673
so part of: GFC30_RS16185
location: 56946..57302
location: region:56946-57302:1
so has part: feature:56946-57302:1:exon

WP_066328118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56946-57302:1:exon

GFC30_RS16190
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16190
old locus tag: GFC30_3325
so part of: sequence
location: 57394..58407
location: region:57394-58407:1
so has part: feature:57394-58407:1:exon
subclass of: SO_0000010

position:57394:1
position: 57394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58407:1
position: 58407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57394-58407:1:exon

GFC30_RS16190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16190
old locus tag: GFC30_3325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014194683.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane lipoprotein carrier protein LolA
translation: MRKNLFRVLLGIMLLIALAGCGTKSQGDVIKALDEKMNDLTSYQAKAKLTLKTGTEPQVYDVEIWYKEPAYYRVSLKNAEKDQSQMILRNDEGVFVITPALNKTFRFQSDWPKNSSQAYLYESLIKDILSDKKANFKATKDYYVFETKTNYPNSKIIPRQEIKLSKKDLSPVSVKVMDPDMNALLTVEFSKVEFNKKFDKDAFDTTKNMTGARLEIPTMAKPKNEALEVMYPVSLPEGVEQIDEKEVATENGKRMIMTFGGKKAFTLVQETARVLPASNTAVLVNGEPVDLGFAVGALTDHSLTWTYKGIEFMIASNDLTREEMVMIARSVQGKAVK
SIO_010081: GFC30_RS16190
subclass of: SO_0000673
so part of: GFC30_RS16190
location: 57394..58407
location: region:57394-58407:1
so has part: feature:57394-58407:1:exon

WP_066328120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57394-58407:1:exon

GFC30_RS16195
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
gene: alr
locus tag: GFC30_RS16195
old locus tag: GFC30_3326
so part of: sequence
location: 58509..59675
location: region:58509-59675:1
so has part: feature:58509-59675:1:exon
subclass of: SO_0000010

position:58509:1
position: 58509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59675:1
position: 59675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58509-59675:1:exon

GFC30_RS16195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
gene: alr
locus tag: GFC30_RS16195
old locus tag: GFC30_3326
EC number: 5.1.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012748964.1
GO function: GO:0008784 - alanine racemase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alanine racemase
translation: MDTMFHRDTWAEVDLDAIFHNVASLRSFLPKETAIMAVVKANAYGHGDAQVAKTALEAGASHLAVAFLDEALALRQKGMHAPILVLGATRPEDVDLAAEKRIALTVFQQEWLEEAKQHHQSGLPVLFHLKMDTGMGRLGVKEEEETKRIVAMIDAYPHFLLEGVYTHFATADEINTDYFSFQYETFLRMLEWLPYRPKWVHCGNSATSLRFPTKVFNIVRFGIAMYGLSPSLAIKPYLPFTLKEAFSLHSRVVHVKRLLPGEKVSYGATYTAEQEEWVGTVPIGYADGWIRKLQNFHVLVNGEKVPIIGRICMDQLMIRLPSYVPIGTKVTLIGQQADEKITMDEVAQYLDTINYEIPCTISYRVPRIFLRNKSIMEVRNAVLDGNNV
SIO_010081: GFC30_RS16195
subclass of: SO_0000673
so part of: GFC30_RS16195
location: 58509..59675
location: region:58509-59675:1
so has part: feature:58509-59675:1:exon

WP_066328121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58509-59675:1:exon

GFC30_RS16200
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16200
old locus tag: GFC30_3327
so part of: sequence
location: 59800..60081
location: region:59800-60081:1
so has part: feature:59800-60081:1:exon
subclass of: SO_0000010

position:59800:1
position: 59800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60081:1
position: 60081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59800-60081:1:exon

GFC30_RS16200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16200
old locus tag: GFC30_3327
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013144044.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CopG family ribbon-helix-helix protein
translation: MSESSATTEIVVRLPQALLTELDGLVKQENGNRNELIYQATKMYIRERKKRQIREAMRRGYMEMAKINLSIASEAFLAEYEADHTVERLVSGG
SIO_010081: GFC30_RS16200
subclass of: SO_0000673
so part of: GFC30_RS16200
location: 59800..60081
location: region:59800-60081:1
so has part: feature:59800-60081:1:exon

WP_027410260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59800-60081:1:exon

GFC30_RS16205
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
gene: ndoA
locus tag: GFC30_RS16205
old locus tag: GFC30_3328
so part of: sequence
location: 60086..60436
location: region:60086-60436:1
so has part: feature:60086-60436:1:exon
subclass of: SO_0000010

position:60086:1
position: 60086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60436:1
position: 60436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60086-60436:1:exon

GFC30_RS16205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
gene: ndoA
locus tag: GFC30_RS16205
old locus tag: GFC30_3328
inference: COORDINATES: similar to AA sequence:RefSeq:NP_388347.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system endoribonuclease NdoA
translation: MIVKRGDVYFADLSPVVGSEQGGVRPVLVIQNDIGNRFSPTVIVAAITAQIQKAKLPTHVEIDAKRYGFERDSVILLEQIRTIDKQRLTDKITHLDDEMMDKVDEALQISLGLIDF
SIO_010081: GFC30_RS16205
subclass of: SO_0000673
so part of: GFC30_RS16205
location: 60086..60436
location: region:60086-60436:1
so has part: feature:60086-60436:1:exon

WP_003253417.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60086-60436:1:exon

GFC30_RS16210
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16210
old locus tag: GFC30_3329
so part of: sequence
location: 60572..62734
location: region:60572-62734:1
so has part: feature:60572-62734:1:exon
subclass of: SO_0000010

position:60572:1
position: 60572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62734:1
position: 62734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60572-62734:1:exon

GFC30_RS16210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16210
old locus tag: GFC30_3329
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011886670.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tex family protein
translation: MERREALIQLIARELGFSKKQVHAVISLFEEGNTVPFIARYRKEFTGALDEVQIRDVLERWHYLQQLEQRKEEVIRLIEEQGKLTKELKNEIEKATKLQQVEDLYRPYKQKRRTKATVAKEKGLEPLAEWLFSFPMAPLPKEKAKEFINVEKGVETDEEALQGAKDIIAERISDDASIRQWVRSQTWKKGVVVANGKDVEKDEKNLYEMYYNYEEPVHKIVPHRILALNRGEKEDVLRVSIQAPVGDIIDYIKANVIGNEQSPAAPFVADAIEDSYKRLIEPSIERDIRNELTEKAEERAIHIFAENLRNLLLQPPLKGKIVLGVDPAYRTGCKLAVVDETGKLLKIDVIYPHPPQAKREEAEQKLVRLLQEYGVQMIAIGNGTASRETEQFVADTLRKLNQEIFYLIVNEAGASVYSASDLARQEFPDLQVEERSAVSIARRVQDPLAELVKIDPKSVGVGQYQHDVSQKKLEESLRFIVETVVNQVGVNVNTASVSLLQYVSGLSKTVAENIVKRREEQGKFKNRNELKAIPRLGAKTYEQCIGFLRIMDGEEPLDRTSIHPERYEEVKKLLQQMGFTTENIGSNELREALQQLPLRETSEELGIGELTLKDIVDALIRPERDPRDELPKPLLRKDILKMEDLQKGMELEGTVRNVVDFGVFIDIGVKQDGLVHISKLSKQYVRHPLDVVSVGEVVKVWVESVDVAKGRISLSMLPLE
SIO_010081: GFC30_RS16210
subclass of: SO_0000673
so part of: GFC30_RS16210
location: 60572..62734
location: region:60572-62734:1
so has part: feature:60572-62734:1:exon

WP_148660446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60572-62734:1:exon

GFC30_RS17005
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
gene: cmpA
locus tag: GFC30_RS17005
so part of: sequence
location: complement(62778..62891)
location: region:62778-62891:-1
so has part: feature:62778-62891:-1:exon
subclass of: SO_0000010

position:62778:-1
position: 62778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62891:-1
position: 62891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62778-62891:-1:exon

GFC30_RS17005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
gene: cmpA
locus tag: GFC30_RS17005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012748966.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cortex morphogenetic protein CmpA
translation: MPTWLKNQMRRAYFEKNRYQIKLLNQCWFFYYKKHCS
SIO_010081: GFC30_RS17005
subclass of: SO_0000673
so part of: GFC30_RS17005
location: complement(62778..62891)
location: region:62778-62891:-1
so has part: feature:62778-62891:-1:exon

WP_148660447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62778-62891:-1:exon

GFC30_RS16215
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16215
old locus tag: GFC30_3330
so part of: sequence
location: 62973..63437
location: region:62973-63437:1
so has part: feature:62973-63437:1:exon
subclass of: SO_0000010

position:62973:1
position: 62973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63437:1
position: 63437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62973-63437:1:exon

GFC30_RS16215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 294699
locus tag: GFC30_RS16215
old locus tag: GFC30_3330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018664749.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SprT family protein
translation: MEQNELQQLVETISWQFFQKPFRHQAIFNSRLRTTGGRYLLRSHNIEINPKHYETFGKEELISIIKHELCHYHLHLEGKGYRHRDRDFRELLQKVNAPRYCQPLPSRRKSVQPIYTYICVQCSFVYQRKRKVNTNRYVCGKCKGTLKIMESKFF
SIO_010081: GFC30_RS16215
subclass of: SO_0000673
so part of: GFC30_RS16215
location: 62973..63437
location: region:62973-63437:1
so has part: feature:62973-63437:1:exon

WP_066328124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62973-63437:1:exon

GFC30_RS16220
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16220
old locus tag: GFC30_3331
so part of: sequence
location: 63575..63649
location: region:63575-63649:1
so has part: feature:63575-63649:1:exon
subclass of: SO_0000663

position:63575:1
position: 63575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63649:1
position: 63649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63575-63649:1:exon

GFC30_RS16220
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 294699
locus tag: GFC30_RS16220
old locus tag: GFC30_3331
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:63607..63609,aa:Asn,seq:gtt)
SIO_010081: GFC30_RS16220
subclass of: SO_0000673
so part of: GFC30_RS16220
location: 63575..63649
location: region:63575-63649:1
so has part: feature:63575-63649:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:63575-63649:1:exon

GFC30_RS16225
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16225
old locus tag: GFC30_3333
so part of: sequence
location: 63653..63745
location: region:63653-63745:1
so has part: feature:63653-63745:1:exon
subclass of: SO_0000663

position:63653:1
position: 63653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63745:1
position: 63745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63653-63745:1:exon

GFC30_RS16225
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 294699
locus tag: GFC30_RS16225
old locus tag: GFC30_3333
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:63687..63689,aa:Ser,seq:gct)
SIO_010081: GFC30_RS16225
subclass of: SO_0000673
so part of: GFC30_RS16225
location: 63653..63745
location: region:63653-63745:1
so has part: feature:63653-63745:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:63653-63745:1:exon

GFC30_RS16230
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16230
old locus tag: GFC30_3335
so part of: sequence
location: 63762..63833
location: region:63762-63833:1
so has part: feature:63762-63833:1:exon
subclass of: SO_0000663

position:63762:1
position: 63762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63833:1
position: 63833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63762-63833:1:exon

GFC30_RS16230
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 294699
locus tag: GFC30_RS16230
old locus tag: GFC30_3335
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:63795..63797,aa:Glu,seq:ttc)
SIO_010081: GFC30_RS16230
subclass of: SO_0000673
so part of: GFC30_RS16230
location: 63762..63833
location: region:63762-63833:1
so has part: feature:63762-63833:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:63762-63833:1:exon

GFC30_RS16235
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16235
old locus tag: GFC30_3336
so part of: sequence
location: 63885..63957
location: region:63885-63957:1
so has part: feature:63885-63957:1:exon
subclass of: SO_0000663

position:63885:1
position: 63885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63957:1
position: 63957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63885-63957:1:exon

GFC30_RS16235
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 294699
locus tag: GFC30_RS16235
old locus tag: GFC30_3336
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:63918..63920,aa:Val,seq:tac)
SIO_010081: GFC30_RS16235
subclass of: SO_0000673
so part of: GFC30_RS16235
location: 63885..63957
location: region:63885-63957:1
so has part: feature:63885-63957:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:63885-63957:1:exon

GFC30_RS16240
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16240
old locus tag: GFC30_3337
so part of: sequence
location: 63976..64051
location: region:63976-64051:1
so has part: feature:63976-64051:1:exon
subclass of: SO_0000663

position:63976:1
position: 63976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64051:1
position: 64051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63976-64051:1:exon

GFC30_RS16240
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 294699
locus tag: GFC30_RS16240
old locus tag: GFC30_3337
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:64009..64011,aa:Asp,seq:gtc)
SIO_010081: GFC30_RS16240
subclass of: SO_0000673
so part of: GFC30_RS16240
location: 63976..64051
location: region:63976-64051:1
so has part: feature:63976-64051:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:63976-64051:1:exon

GFC30_RS16245
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16245
old locus tag: GFC30_3338
so part of: sequence
location: 64064..64138
location: region:64064-64138:1
so has part: feature:64064-64138:1:exon
subclass of: SO_0000663

position:64064:1
position: 64064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64138:1
position: 64138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64064-64138:1:exon

GFC30_RS16245
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 294699
locus tag: GFC30_RS16245
old locus tag: GFC30_3338
product: tRNA-Gln
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:64096..64098,aa:Gln,seq:ttg)
SIO_010081: GFC30_RS16245
subclass of: SO_0000673
so part of: GFC30_RS16245
location: 64064..64138
location: region:64064-64138:1
so has part: feature:64064-64138:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64064-64138:1:exon

GFC30_RS16250
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16250
old locus tag: GFC30_3339
so part of: sequence
location: 64144..64216
location: region:64144-64216:1
so has part: feature:64144-64216:1:exon
subclass of: SO_0000663

position:64144:1
position: 64144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64216:1
position: 64216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64144-64216:1:exon

GFC30_RS16250
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 294699
locus tag: GFC30_RS16250
old locus tag: GFC30_3339
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:64177..64179,aa:Lys,seq:ttt)
SIO_010081: GFC30_RS16250
subclass of: SO_0000673
so part of: GFC30_RS16250
location: 64144..64216
location: region:64144-64216:1
so has part: feature:64144-64216:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64144-64216:1:exon

GFC30_RS16255
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16255
old locus tag: GFC30_3340
so part of: sequence
location: 64222..64303
location: region:64222-64303:1
so has part: feature:64222-64303:1:exon
subclass of: SO_0000663

position:64222:1
position: 64222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64303:1
position: 64303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64222-64303:1:exon

GFC30_RS16255
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 294699
locus tag: GFC30_RS16255
old locus tag: GFC30_3340
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:64256..64258,aa:Leu,seq:tag)
SIO_010081: GFC30_RS16255
subclass of: SO_0000673
so part of: GFC30_RS16255
location: 64222..64303
location: region:64222-64303:1
so has part: feature:64222-64303:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64222-64303:1:exon

GFC30_RS16260
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16260
old locus tag: GFC30_3341
so part of: sequence
location: 64312..64394
location: region:64312-64394:1
so has part: feature:64312-64394:1:exon
subclass of: SO_0000663

position:64312:1
position: 64312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64394:1
position: 64394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64312-64394:1:exon

GFC30_RS16260
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 294699
locus tag: GFC30_RS16260
old locus tag: GFC30_3341
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:64345..64347,aa:Leu,seq:gag)
SIO_010081: GFC30_RS16260
subclass of: SO_0000673
so part of: GFC30_RS16260
location: 64312..64394
location: region:64312-64394:1
so has part: feature:64312-64394:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64312-64394:1:exon

GFC30_RS16265
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16265
old locus tag: GFC30_3343
so part of: sequence
location: 64452..64528
location: region:64452-64528:1
so has part: feature:64452-64528:1:exon
subclass of: SO_0000663

position:64452:1
position: 64452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64528:1
position: 64528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64452-64528:1:exon

GFC30_RS16265
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 294699
locus tag: GFC30_RS16265
old locus tag: GFC30_3343
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:64486..64488,aa:Arg,seq:acg)
SIO_010081: GFC30_RS16265
subclass of: SO_0000673
so part of: GFC30_RS16265
location: 64452..64528
location: region:64452-64528:1
so has part: feature:64452-64528:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64452-64528:1:exon

GFC30_RS16270
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16270
old locus tag: GFC30_3344
so part of: sequence
location: 64532..64608
location: region:64532-64608:1
so has part: feature:64532-64608:1:exon
subclass of: SO_0000663

position:64532:1
position: 64532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64608:1
position: 64608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64532-64608:1:exon

GFC30_RS16270
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 294699
locus tag: GFC30_RS16270
old locus tag: GFC30_3344
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:64566..64568,aa:Pro,seq:tgg)
SIO_010081: GFC30_RS16270
subclass of: SO_0000673
so part of: GFC30_RS16270
location: 64532..64608
location: region:64532-64608:1
so has part: feature:64532-64608:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64532-64608:1:exon

GFC30_RS16275
type: Gene
subclass of: SO_0000704
RO_0002162: 294699
locus tag: GFC30_RS16275
old locus tag: GFC30_3345
so part of: sequence
location: 64792..64865
location: region:64792-64865:1
so has part: feature:64792-64865:1:exon
subclass of: SO_0000663

position:64792:1
position: 64792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64865:1
position: 64865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64792-64865:1:exon

GFC30_RS16275
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 294699
locus tag: GFC30_RS16275
old locus tag: GFC30_3345
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:64824..64826,aa:Gly,seq:tcc)
SIO_010081: GFC30_RS16275
subclass of: SO_0000673
so part of: GFC30_RS16275
location: 64792..64865
location: region:64792-64865:1
so has part: feature:64792-64865:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64792-64865:1:exon

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 294699
note: 16S ribosomal RNA rRNA prediction is too short
so part of: sequence
location: 64944..65295
location: region:64944-65295:1
so has part: feature:64944-65295:1:region

position:64944:1
position: 64944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64944-65295:1:region