Dolosigranulum pigrum strain KPL1914 chromosome.
Bacteria; Bacillota; Bacilli; Lactobacillales; Carnobacteriaceae; Dolosigranulum.
Dolosigranulum pigrum Cooperation and Competition in Human Nasal Microbiota
Submitted (05-JUN-2019) Microbiology, Forsyth Institute, 245 First Street, Cambridge, MA 02142, USA
Submitted (20-MAR-2017) Microbiology, Forsyth Institute, 245 First Street, Cambridge, MA 02142, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP040938.1.\nBacteria and source DNA available from K. P. Lemon, The Lemon Lab\nChromosome not circularized.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nThis genome has a base modification file available.\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 2016\nAssembly Method :: HGAP v. 3.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 208.0x\nSequencing Technology :: PacBio RSII\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/24/2023 04:32:38\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,818\nCDSs (total) :: 1,749\nGenes (coding) :: 1,731\nCDSs (with protein) :: 1,731\nGenes (RNA) :: 69\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 53\nncRNAs :: 4\nPseudo Genes (total) :: 18\nCDSs (without protein) :: 18\nPseudo Genes (ambiguous residues) :: 0 of 18\nPseudo Genes (frameshifted) :: 6 of 18\nPseudo Genes (incomplete) :: 12 of 18\nPseudo Genes (internal stop) :: 5 of 18\nPseudo Genes (multiple problems) :: 4 of 18\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##
COORDINATES: similar to AA sequence:RefSeq:WP_002384047.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
frameshifted; incomplete; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: ab initio prediction:GeneMarkS-2+
GO:0005576 - extracellular region [Evidence IEA]
GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
ZmpA/ZmpB/ZmpC family metallo-endopeptidase
COORDINATES: protein motif:HMM:NF019216.2
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF017180.2
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
ZmpA/ZmpB/ZmpC family metallo-endopeptidase-related protein
COORDINATES: protein motif:HMM:NF019142.2
COORDINATES: protein motif:HMM:TIGR01168.1
The YSIRK form of extended signal peptide directs nascent proteins to the cross-wall site, while signal peptides lacking YSIRK direct proteins instead to the cell pole. A large fraction of YSIRK proteins are surface proteins anchored by sortase-mediated processing of a C-terminal LPXTG motif; Derived by automated computational analysis using gene prediction method: Protein Homology.
YSIRK-type signal peptide-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004634827.1
COORDINATES: protein motif:HMM:NF013132.2
COORDINATES: similar to AA sequence:RefSeq:WP_004634832.1
GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045264 - plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003564959.1
GO:0015078 - proton transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006418009.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634838.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634840.1
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006418043.1
COORDINATES: similar to AA sequence:RefSeq:WP_006309649.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634844.1
signal recognition particle sRNA small type
COORDINATES: nucleotide motif:Rfam:14.4:RF00169
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_004634846.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024110.2
COORDINATES: similar to AA sequence:RefSeq:WP_004634850.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004634852.1
GO:0003824 - catalytic activity [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
secondary thiamine-phosphate synthase enzyme YjbQ
COORDINATES: similar to AA sequence:RefSeq:WP_004634856.1
GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004634858.1
GO:0097367 - carbohydrate derivative binding [Evidence IEA]
GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004634860.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634862.1
GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00099.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634867.1
threonine/serine exporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003779094.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634873.1
GO:0036524 - protein deglycase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF022240.2
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: similar to AA sequence:RefSeq:WP_004634885.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634886.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634888.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004634890.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634892.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_004827108.1
COORDINATES: similar to AA sequence:RefSeq:WP_002843950.1
LytTR family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012512573.1
COORDINATES: similar to AA sequence:RefSeq:WP_003777963.1
GO:0050334 - thiaminase activity [Evidence IEA]
GO:0006772 - thiamine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006701509.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013668938.1
COORDINATES: similar to AA sequence:RefSeq:WP_013669904.1
COORDINATES: protein motif:HMM:NF014325.2
COORDINATES: protein motif:HMM:NF014443.2
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004634903.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634905.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634908.1
transketolase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004634909.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634912.1
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016397350.1
COORDINATES: protein motif:HMM:NF012579.2
BglG family transcription antiterminator
COORDINATES: similar to AA sequence:RefSeq:WP_010051340.1
D-ribose ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_016171428.1
functions to transport ribose at high affinity; forms a complex with RbsA2C2B; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010328829.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_019259650.1
GO:0016872 - intramolecular lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004634927.1
GO:0004747 - ribokinase activity [Evidence IEA]
GO:0019303 - D-ribose catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012742.2
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_002942223.1
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016250573.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004634935.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634936.1
MetQ/NlpA family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004634938.1
COORDINATES: similar to AA sequence:RefSeq:WP_004637038.1
GO:0004180 - carboxypeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004634942.1
GO:0018580 - nitronate monooxygenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004634944.1
COORDINATES: protein motif:HMM:NF014757.2
3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004634950.1
COORDINATES: protein motif:HMM:NF024741.2
COORDINATES: protein motif:HMM:NF012610.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: protein motif:HMM:NF021104.2
COORDINATES: protein motif:HMM:NF012301.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: similar to AA sequence:RefSeq:WP_016897688.1
COORDINATES: similar to AA sequence:RefSeq:WP_016729341.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634966.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634968.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634970.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634972.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634974.1
COORDINATES: protein motif:HMM:NF012706.2
peptide ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:TIGR03558.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010922342.1
GO:0017118 - lipoyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004634982.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634983.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634986.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634988.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004634990.1
energy-coupling factor transporter transmembrane protein EcfT
COORDINATES: similar to AA sequence:RefSeq:WP_016614425.1
GO:0055085 - transmembrane transport [Evidence IEA]
energy-coupling factor ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_016177188.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634998.1
COORDINATES: similar to AA sequence:RefSeq:WP_003777726.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003777724.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_005607440.1
COORDINATES: similar to AA sequence:RefSeq:WP_008809894.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1
COORDINATES: similar to AA sequence:RefSeq:WP_017185218.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635009.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003777714.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005592004.1
COORDINATES: similar to AA sequence:RefSeq:WP_003777710.1
COORDINATES: similar to AA sequence:RefSeq:WP_013773083.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006585189.1
COORDINATES: similar to AA sequence:RefSeq:WP_016250300.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003664546.1
COORDINATES: similar to AA sequence:RefSeq:WP_002946164.1
COORDINATES: similar to AA sequence:RefSeq:WP_016185989.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635029.1
COORDINATES: similar to AA sequence:RefSeq:WP_012727667.1
COORDINATES: similar to AA sequence:RefSeq:WP_011983253.1
COORDINATES: similar to AA sequence:RefSeq:WP_003638068.1
COORDINATES: similar to AA sequence:RefSeq:WP_002288661.1
COORDINATES: similar to AA sequence:RefSeq:WP_003127974.1
COORDINATES: similar to AA sequence:RefSeq:WP_008211812.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018659670.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635044.1
COORDINATES: similar to AA sequence:RefSeq:WP_003641254.1
COORDINATES: similar to AA sequence:RefSeq:WP_006703268.1
COORDINATES: similar to AA sequence:RefSeq:WP_004262542.1
COORDINATES: similar to AA sequence:RefSeq:WP_002816040.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635053.1
GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO:0016743 - carboxyl- or carbamoyltransferase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635054.1
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]
acetyl-CoA carboxylase, carboxyltransferase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_004635057.1
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]; GO:0004075 - biotin carboxylase activity [Evidence IEA]
acetyl-CoA carboxylase biotin carboxylase subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004635058.1
GO:0016836 - hydro-lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00531.1
acetyl-CoA carboxylase biotin carboxyl carrier protein
COORDINATES: similar to AA sequence:RefSeq:WP_004635061.1
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635063.1
GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]
3-oxoacyl-[acyl-carrier-protein] reductase
COORDINATES: protein motif:HMM:NF012901.2
COORDINATES: similar to AA sequence:RefSeq:WP_004635066.1
enoyl-[acyl-carrier-protein] reductase FabK
COORDINATES: similar to AA sequence:RefSeq:WP_001865737.1
COORDINATES: protein motif:HMM:NF006829.0
COORDINATES: similar to AA sequence:RefSeq:WP_004635072.1
COORDINATES: similar to AA sequence:RefSeq:WP_007724307.1
GO:0004459 - L-lactate dehydrogenase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635076.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002306607.1
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: similar to AA sequence:RefSeq:WP_015077786.1
COORDINATES: similar to AA sequence:RefSeq:WP_010778541.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635083.1
GO:0004476 - mannose-6-phosphate isomerase activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014893.2
COORDINATES: similar to AA sequence:RefSeq:WP_004635085.1
GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635086.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
sigma 54-interacting transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_005607643.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636157.1
GO:0004623 - phospholipase A2 activity [Evidence IEA]
GO:0050482 - arachidonic acid secretion [Evidence IEA]; GO:0006644 - phospholipid metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017760.2
COORDINATES: similar to AA sequence:RefSeq:WP_016624168.1
GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635089.1
mannose/fructose/sorbose PTS transporter subunit IIB
COORDINATES: similar to AA sequence:RefSeq:WP_005591779.1
PTS mannose/fructose/sorbose transporter subunit IIC
COORDINATES: similar to AA sequence:RefSeq:WP_004635091.1
PTS system mannose/fructose/sorbose family transporter subunit IID
COORDINATES: similar to AA sequence:RefSeq:WP_004635093.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635094.1
COORDINATES: protein motif:HMM:NF013300.2
GO:0004560 - alpha-L-fucosidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013126.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635097.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635098.1
GO:0047689 - aspartate racemase activity [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012692.2
COORDINATES: protein motif:HMM:NF012376.2
GO:0009166 - nucleotide catabolic process [Evidence IEA]
5'-nucleotidase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004635101.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: similar to AA sequence:RefSeq:WP_004635102.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
ribonuclease III domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004635103.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014566.2
CPBP family intramembrane metalloprotease
COORDINATES: protein motif:HMM:NF024950.2
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004635109.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635110.1
GO:0003848 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
COORDINATES: similar to AA sequence:RefSeq:WP_004635115.1
COORDINATES: protein motif:HMM:NF038270.1
COORDINATES: protein motif:HMM:NF025854.2
COORDINATES: similar to AA sequence:RefSeq:WP_002318500.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO:0043214 - ABC-type bacteriocin transporter activity [Evidence IEA]
GO:0043213 - bacteriocin transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF033563.0
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635128.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00230
T-box leader; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_016648167.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0043768 - S-ribosylhomocysteine lyase activity [Evidence IEA]
GO:0009372 - quorum sensing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635130.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635131.1
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
COORDINATES: similar to AA sequence:RefSeq:WP_004635132.1
COORDINATES: similar to AA sequence:RefSeq:WP_003777576.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635136.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635138.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635150.1
COORDINATES: similar to AA sequence:RefSeq:WP_016398107.1
GO:0030163 - protein catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635152.1
COORDINATES: similar to AA sequence:RefSeq:WP_002994173.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635158.1
GO:0004150 - dihydroneopterin aldolase activity [Evidence IEA]
GO:0006760 - folic acid-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635161.1
GO:0003934 - GTP cyclohydrolase I activity [Evidence IEA]
GO:0042559 - pteridine-containing compound biosynthetic process [Evidence IEA]; GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01499.1
folylpolyglutamate synthase/dihydrofolate synthase family protein
COORDINATES: protein motif:HMM:NF012869.2
COORDINATES: similar to AA sequence:RefSeq:WP_004635166.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003637317.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635171.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635172.1
type II CAAX endopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004635184.1
COORDINATES: similar to AA sequence:RefSeq:WP_007724641.1
COORDINATES: similar to AA sequence:RefSeq:WP_013712072.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635210.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635212.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: similar to AA sequence:RefSeq:WP_010767206.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635217.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635221.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635230.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635233.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635239.1
GO:0008381 - mechanosensitive monoatomic ion channel activity [Evidence IEA]
large conductance mechanosensitive channel protein MscL
COORDINATES: protein motif:HMM:TIGR00589.1
GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: protein motif:HMM:NF018296.2
COORDINATES: similar to AA sequence:RefSeq:WP_002293105.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635246.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635248.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_005226255.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635251.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0008168 - methyltransferase activity [Evidence IEA]
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
COORDINATES: protein motif:HMM:NF024141.2
COORDINATES: similar to AA sequence:RefSeq:WP_008378986.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635254.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635256.1
COORDINATES: protein motif:HMM:TIGR02937.1
sigma-70 family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:NF016825.2
cyclodeaminase/cyclohydrolase family protein
COORDINATES: protein motif:HMM:TIGR02727.1
GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635265.1
bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_004635266.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004329 - formate-tetrahydrofolate ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635268.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635271.1
GO:0008929 - methylglyoxal synthase activity [Evidence IEA]
GO:0006007 - glucose catabolic process [Evidence IEA]; GO:0019242 - methylglyoxal biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010766162.1
COORDINATES: similar to AA sequence:RefSeq:WP_013710863.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635278.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635280.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]; GO:0051353 - positive regulation of oxidoreductase activity [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase activating protein
COORDINATES: similar to AA sequence:RefSeq:WP_004635282.1
GO:0008998 - ribonucleoside-triphosphate reductase activity [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_004635289.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_004635290.1
COORDINATES: similar to AA sequence:RefSeq:WP_014124625.1
GO:0015144 - carbohydrate transmembrane transporter activity [Evidence IEA]
alpha-glucoside-specific PTS transporter subunit IIBC
COORDINATES: protein motif:HMM:NF015338.2
endonuclease/exonuclease/phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004635302.1
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: protein motif:HMM:NF014679.2
COORDINATES: similar to AA sequence:RefSeq:WP_004635307.1
COORDINATES: similar to AA sequence:RefSeq:WP_000708764.1
COORDINATES: similar to AA sequence:RefSeq:WP_003777547.1
COORDINATES: protein motif:HMM:TIGR02357.1
GO:0015234 - thiamine transmembrane transporter activity [Evidence IEA]
GO:0015888 - thiamine transport [Evidence IEA]
energy-coupled thiamine transporter ThiT
COORDINATES: similar to AA sequence:RefSeq:WP_004635315.1
COORDINATES: protein motif:HMM:NF007033.0
COORDINATES: similar to AA sequence:RefSeq:WP_002355021.1
GO:0006364 - rRNA processing [Evidence IEA]
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
COORDINATES: similar to AA sequence:RefSeq:WP_004635322.1
trypsin-like peptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004635323.1
COORDINATES: protein motif:HMM:NF021186.2
two-component system regulatory protein YycI
COORDINATES: protein motif:HMM:NF019079.2
two-component system activity regulator YycH
COORDINATES: similar to AA sequence:RefSeq:WP_004635328.1
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
cell wall metabolism sensor histidine kinase WalK
COORDINATES: similar to AA sequence:RefSeq:WP_004635329.1
COORDINATES: similar to AA sequence:RefSeq:WP_003777468.1
COORDINATES: protein motif:HMM:NF024143.2
COORDINATES: similar to AA sequence:RefSeq:WP_003777438.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635339.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635345.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635343.1
COORDINATES: similar to AA sequence:RefSeq:WP_010052379.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635360.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635361.1
COORDINATES: similar to AA sequence:RefSeq:WP_003682305.1
COORDINATES: similar to AA sequence:RefSeq:WP_005226365.1
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003680796.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635365.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635366.1
GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635367.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635368.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635369.1
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_004635370.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635371.1
COORDINATES: similar to AA sequence:RefSeq:WP_002419450.1
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635373.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
chromosomal replication initiator protein DnaA
COORDINATES: similar to AA sequence:RefSeq:WP_003777395.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635375.1
GO:0004526 - ribonuclease P activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003777391.1
YidC/Oxa1 family membrane protein insertase
COORDINATES: protein motif:HMM:NF024483.2
RNA-binding cell elongation regulator Jag/EloR
COORDINATES: protein motif:HMM:NF014669.2
COORDINATES: protein motif:HMM:NF014762.2
metal-dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_010247638.1
COORDINATES: protein motif:HMM:NF014608.2
COORDINATES: protein motif:HMM:NF019474.2
COORDINATES: similar to AA sequence:RefSeq:WP_019251947.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004635403.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635404.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635406.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635408.1
COORDINATES: similar to AA sequence:RefSeq:WP_002287412.1
GO:0003676 - nucleic acid binding [Evidence IEA]
S1 domain-containing RNA-binding protein
COORDINATES: protein motif:HMM:TIGR02432.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019157150.1
GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635415.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635417.1
GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635418.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016183961.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635422.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: similar to AA sequence:RefSeq:WP_006418267.1
GO:0097573 - glutathione oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635429.1
class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI
COORDINATES: similar to AA sequence:RefSeq:WP_010755716.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
class 1b ribonucleoside-diphosphate reductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_004635433.1
GO:0005971 - ribonucleoside-diphosphate reductase complex [Evidence IEA]
GO:0030145 - manganese ion binding [Evidence IEA]; GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
class 1b ribonucleoside-diphosphate reductase subunit beta
COORDINATES: protein motif:HMM:NF024760.2
GO:0070007 - glutamic-type endopeptidase activity [Evidence IEA]
PrsW family glutamic-type intramembrane protease
COORDINATES: similar to AA sequence:RefSeq:WP_004195755.1
GO:0046872 - metal ion binding [Evidence IEA]
zinc ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:TIGR01363.1
pneumococcal-type histidine triad protein
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003777786.1
COORDINATES: similar to AA sequence:RefSeq:WP_003777785.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635461.1
metal ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004635463.1
COORDINATES: similar to AA sequence:RefSeq:WP_013712090.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
COORDINATES: similar to AA sequence:RefSeq:WP_004635468.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: protein motif:HMM:NF015378.2
COORDINATES: protein motif:HMM:NF012257.2
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004635475.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635477.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635479.1
COORDINATES: similar to AA sequence:RefSeq:WP_003777567.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635484.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635485.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01085.1
UDP-N-acetylmuramyl-tripeptide synthetase
COORDINATES: protein motif:HMM:NF016827.2
COORDINATES: protein motif:HMM:NF016439.2
COORDINATES: similar to AA sequence:RefSeq:WP_007725274.1
COORDINATES: similar to AA sequence:RefSeq:WP_002319527.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635497.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635498.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635500.1
COORDINATES: similar to AA sequence:RefSeq:WP_010754958.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635504.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635507.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635510.1
COORDINATES: similar to AA sequence:RefSeq:WP_007721936.1
LytTR family transcriptional regulator DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004635514.1
GO:0009267 - cellular response to starvation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008809931.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635517.1
COORDINATES: similar to AA sequence:RefSeq:WP_003777628.1
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
transcription termination/antitermination protein NusG
COORDINATES: similar to AA sequence:RefSeq:WP_004635522.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635524.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00557
ribosomal protein L10 leader region; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_004051400.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003693210.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635530.1
FtsW/RodA/SpoVE family cell cycle protein
COORDINATES: protein motif:HMM:NF013279.2
GO:0051301 - cell division [Evidence IEA]
COORDINATES: protein motif:HMM:NF016413.2
COORDINATES: similar to AA sequence:RefSeq:WP_004635536.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635538.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0032549 - ribonucleoside binding [Evidence IEA]
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_004635540.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
DNA-directed RNA polymerase subunit beta'
COORDINATES: similar to AA sequence:RefSeq:WP_009488051.1
COORDINATES: similar to AA sequence:RefSeq:WP_010720461.1
COORDINATES: similar to AA sequence:RefSeq:WP_013712038.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:YP_499102.1
COORDINATES: protein motif:HMM:NF013245.2
COORDINATES: similar to AA sequence:RefSeq:WP_004635550.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635554.1
COORDINATES: similar to AA sequence:RefSeq:WP_019769041.1
COORDINATES: protein motif:HMM:NF013936.2
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: similar to AA sequence:RefSeq:WP_003146885.1
COORDINATES: similar to AA sequence:RefSeq:WP_000738774.1
sugar ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018373342.1
COORDINATES: similar to AA sequence:RefSeq:WP_016250560.1
COORDINATES: protein motif:HMM:NF024488.2
COORDINATES: similar to AA sequence:RefSeq:WP_000241731.1
COORDINATES: protein motif:HMM:NF016000.2
COORDINATES: similar to AA sequence:RefSeq:WP_004635574.1
cyclically-permuted mutarotase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004635575.1
GO:0008747 - N-acetylneuraminate lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635576.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635581.1
MurR/RpiR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007208400.1
N-acetylmannosamine-6-phosphate 2-epimerase
COORDINATES: similar to AA sequence:RefSeq:WP_004635585.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635588.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635590.1
COORDINATES: similar to AA sequence:RefSeq:WP_003582479.1
heavy metal-associated domain-containing protein
COORDINATES: protein motif:HMM:NF015585.2
COORDINATES: protein motif:HMM:TIGR00797.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635594.1
COORDINATES: similar to AA sequence:RefSeq:WP_004637043.1
COORDINATES: protein motif:HMM:NF017946.2
COORDINATES: protein motif:HMM:TIGR02698.1
GO:0006825 - copper ion transport [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
CopY/TcrY family copper transport repressor
COORDINATES: similar to AA sequence:RefSeq:WP_004637036.1
COORDINATES: similar to AA sequence:RefSeq:WP_004637034.1
COORDINATES: similar to AA sequence:RefSeq:WP_004637033.1
COORDINATES: protein motif:HMM:NF015038.2
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF000539.0
COORDINATES: protein motif:HMM:NF038161.1
class II lanthipeptide, LchA2/BrtA2 family
COORDINATES: protein motif:HMM:TIGR03897.1
GO:0018081 - peptide cross-linking via lanthionine or 3-methyl-lanthionine [Evidence IEA]; GO:0018193 - peptidyl-amino acid modification [Evidence IEA]; GO:0009403 - toxin biosynthetic process [Evidence IEA]
peptidase domain-containing ABC transporter
COORDINATES: protein motif:HMM:NF024964.2
COORDINATES: protein motif:HMM:NF017000.2
lanthionine synthetase LanC family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020281415.1
COORDINATES: similar to AA sequence:RefSeq:WP_003776275.1
GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO:0000373 - Group II intron splicing [Evidence IEA]
group II intron reverse transcriptase/maturase
COORDINATES: similar to AA sequence:RefSeq:WP_014387012.1
COORDINATES: similar to AA sequence:RefSeq:WP_004194051.1
(deoxy)nucleoside triphosphate pyrophosphohydrolase
COORDINATES: protein motif:HMM:NF012311.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004637030.1
COORDINATES: similar to AA sequence:RefSeq:WP_004637028.1
GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004637025.1
COORDINATES: protein motif:HMM:NF014376.2
COORDINATES: similar to AA sequence:RefSeq:WP_004637023.1
GO:0015486 - glycoside-pentoside-hexuronide:cation symporter activity [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0006812 - monoatomic cation transport [Evidence IEA]
glycoside-pentoside-hexuronide (GPH):cation symporter
COORDINATES: protein motif:HMM:NF012589.2
COORDINATES: similar to AA sequence:RefSeq:WP_019898028.1
COORDINATES: similar to AA sequence:RefSeq:WP_004637020.1
GO:0008736 - L-fucose isomerase activity [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]
GO:0019317 - fucose catabolic process [Evidence IEA]; GO:0005996 - monosaccharide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004637019.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0048029 - monosaccharide binding [Evidence IEA]
GO:0005996 - monosaccharide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008380699.1
GO:0008959 - phosphate acetyltransferase activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004637017.1
COORDINATES: similar to AA sequence:RefSeq:WP_110943085.1
glycine/sarcosine/betaine reductase complex selenoprotein A
COORDINATES: similar to AA sequence:RefSeq:WP_004637014.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016179876.1
COORDINATES: similar to AA sequence:RefSeq:WP_010744553.1
glycine/sarcosine/betaine reductase complex component C subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_004637011.1
glycine/sarcosine/betaine reductase complex component C subunit alpha
COORDINATES: protein motif:HMM:NF016064.2
COORDINATES: protein motif:HMM:NF013379.2
COORDINATES: similar to AA sequence:RefSeq:WP_004637008.1
putative selenate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004637007.1
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: similar to AA sequence:RefSeq:WP_006807504.1
GO:0030700 - glycine reductase complex [Evidence IEA]
GO:0030699 - glycine reductase activity [Evidence IEA]
glycine reductase complex selenoprotein B
COORDINATES: similar to AA sequence:RefSeq:WP_010744546.1
glycine/sarcosine/betaine reductase component B subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004636996.1
COORDINATES: similar to AA sequence:RefSeq:WP_014834651.1
GO:0004756 - selenide, water dikinase activity [Evidence IEA]
GO:0001887 - selenium compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03527.1
sulfurtransferase-like selenium metabolism protein YedF
COORDINATES: protein motif:HMM:NF023251.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636988.1
GO:0001514 - selenocysteine incorporation [Evidence IEA]; GO:0006414 - translational elongation [Evidence IEA]
selenocysteine-specific translation elongation factor
COORDINATES: similar to AA sequence:RefSeq:WP_004636986.1
GO:0004125 - L-seryl-tRNASec selenium transferase activity [Evidence IEA]
GO:0016260 - selenocysteine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012424.2
dihydrolipoamide acetyltransferase family protein
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636982.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: protein motif:HMM:NF019003.2
GO:0050485 - oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor [Evidence IEA]
glycine/sarcosine/betaine reductase selenoprotein B family protein
COORDINATES: protein motif:HMM:NF015552.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636979.1
GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_143047326.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013622.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636975.1
COORDINATES: similar to AA sequence:RefSeq:WP_005237293.1
GO:0000910 - cytokinesis [Evidence IEA]; GO:0006810 - transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007721580.1
permease-like cell division protein FtsX
COORDINATES: similar to AA sequence:RefSeq:WP_004636969.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636968.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636966.1
COORDINATES: similar to AA sequence:RefSeq:WP_006703494.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636964.1
GO:0004022 - alcohol dehydrogenase (NAD+) activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006066 - alcohol metabolic process [Evidence IEA]; GO:0015976 - carbon utilization [Evidence IEA]
bifunctional acetaldehyde-CoA/alcohol dehydrogenase
COORDINATES: protein motif:HMM:TIGR00706.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636962.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00168
Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis, transport and catabolism; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_004636961.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636960.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636959.1
GO:0047688 - aspartate 4-decarboxylase activity [Evidence IEA]
GO:0006531 - aspartate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012958.2
COORDINATES: similar to AA sequence:RefSeq:WP_018659808.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636955.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636954.1
GO:0004016 - adenylate cyclase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636953.1
COORDINATES: similar to AA sequence:RefSeq:WP_010739004.1
GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017927.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636950.1
COORDINATES: protein motif:HMM:NF026010.2
Arm DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_000357940.1
GO:0016301 - kinase activity [Evidence IEA]
type II toxin-antitoxin system death-on-curing family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_003055091.1
COORDINATES: protein motif:HMM:NF012920.2
COORDINATES: similar to AA sequence:RefSeq:WP_016068226.1
COORDINATES: protein motif:HMM:NF025695.2
COORDINATES: similar to AA sequence:RefSeq:WP_010768421.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636944.1
GO:0017103 - UTP:galactose-1-phosphate uridylyltransferase activity [Evidence IEA]
GO:0019388 - galactose catabolic process [Evidence IEA]
UDP-glucose--hexose-1-phosphate uridylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011054983.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: protein motif:HMM:TIGR01575.1
GO:0008999 - peptide-alanine-alpha-N-acetyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]; GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosomal protein S18-alanine N-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004636941.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: protein motif:HMM:NF014724.2
COORDINATES: similar to AA sequence:RefSeq:WP_003778444.1
GO:0016763 - pentosyltransferase activity [Evidence IEA]
GO:0043101 - purine-containing compound salvage [Evidence IEA]; GO:0046110 - xanthine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636938.1
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004636937.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636936.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636935.1
COORDINATES: similar to AA sequence:RefSeq:WP_003778535.1
GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO:0045182 - translation regulator activity [Evidence IEA]
GO:0009386 - translational attenuation [Evidence IEA]
ribosome-associated translation inhibitor RaiA
COORDINATES: similar to AA sequence:RefSeq:WP_004636932.1
glutathione S-transferase family protein
COORDINATES: protein motif:HMM:NF014567.2
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_004636930.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636929.1
COORDINATES: similar to AA sequence:RefSeq:WP_003705433.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636906.1
COORDINATES: similar to AA sequence:RefSeq:WP_003143652.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636901.1
COORDINATES: protein motif:HMM:NF014420.2
energy-coupling factor transporter transmembrane component T
COORDINATES: similar to AA sequence:RefSeq:WP_004636895.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636887.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636886.1
carbamoyl phosphate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014829674.1
COORDINATES: protein motif:HMM:NF021127.2
COORDINATES: protein motif:HMM:NF013954.2
peptidoglycan DD-metalloendopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004636878.1
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0044205 - 'de novo' UMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636876.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636875.1
COORDINATES: similar to AA sequence:RefSeq:WP_001293821.1
GO:0016597 - amino acid binding [Evidence IEA]; GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0006520 - amino acid metabolic process [Evidence IEA]
aspartate carbamoyltransferase catalytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004636871.1
GO:0004151 - dihydroorotase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006702390.1
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636868.1
GO:0004421 - hydroxymethylglutaryl-CoA synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636867.1
COORDINATES: similar to AA sequence:RefSeq:WP_004226487.1
COORDINATES: protein motif:HMM:NF014505.2
type II toxin-antitoxin system PemK/MazF family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_004636866.1
GO:0004420 - hydroxymethylglutaryl-CoA reductase (NADPH) activity [Evidence IEA]
GO:0016054 - organic acid catabolic process [Evidence IEA]
hydroxymethylglutaryl-CoA reductase, degradative
COORDINATES: protein motif:HMM:NF015867.2
helix-hairpin-helix domain-containing protein
COORDINATES: protein motif:HMM:TIGR00361.1
GO:0005215 - transporter activity [Evidence IEA]
GO:0009290 - DNA import into cell involved in transformation [Evidence IEA]
DNA internalization-related competence protein ComEC/Rec2
COORDINATES: similar to AA sequence:RefSeq:WP_004636863.1
COORDINATES: protein motif:HMM:NF039507.1
Rib/alpha-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004636854.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636853.1
COORDINATES: similar to AA sequence:RefSeq:WP_010011787.1
COORDINATES: similar to AA sequence:RefSeq:WP_010771937.1
ATP-dependent Clp protease ATP-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_003778163.1
COORDINATES: protein motif:HMM:NF024945.2
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004636848.1
GO:0008251 - tRNA-specific adenosine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0002100 - tRNA wobble adenosine to inosine editing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636847.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003778121.1
RnfABCDGE type electron transport complex subunit D
COORDINATES: similar to AA sequence:RefSeq:WP_004636845.1
GO:0004084 - branched-chain-amino-acid transaminase activity [Evidence IEA]
GO:0009081 - branched-chain amino acid metabolic process [Evidence IEA]
branched-chain amino acid aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004636844.1
GO:0004601 - peroxidase activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: protein motif:HMM:NF016724.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006304 - DNA modification [Evidence IEA]
Eco57I restriction-modification methylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004826776.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636842.1
GO:0004797 - thymidine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007720731.1
GO:0016149 - translation release factor activity, codon specific [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636840.1
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004636839.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013711303.1
GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636837.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636836.1
GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004636835.1
COORDINATES: similar to AA sequence:RefSeq:WP_012677903.1
COORDINATES: similar to AA sequence:RefSeq:WP_015016945.1
COORDINATES: similar to AA sequence:RefSeq:WP_012766865.1
spermidine/putrescine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004636831.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0009381 - excinuclease ABC activity [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF024698.2
COORDINATES: protein motif:HMM:NF013672.2
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004636827.1
GO:0008902 - hydroxymethylpyrimidine kinase activity [Evidence IEA]; GO:0008972 - phosphomethylpyrimidine kinase activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
COORDINATES: protein motif:HMM:NF013584.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636825.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636824.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636823.1
GO:0008890 - glycine C-acetyltransferase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015508804.1
GO:0016154 - pyrimidine-nucleoside phosphorylase activity [Evidence IEA]
GO:0006213 - pyrimidine nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636821.1
COORDINATES: protein motif:HMM:NF017273.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636818.1
GO:0004452 - isopentenyl-diphosphate delta-isomerase activity [Evidence IEA]
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
type 2 isopentenyl-diphosphate Delta-isomerase
COORDINATES: protein motif:HMM:TIGR01220.1
GO:0004631 - phosphomevalonate kinase activity [Evidence IEA]
GO:0019287 - isopentenyl diphosphate biosynthetic process, mevalonate pathway [Evidence IEA]; GO:0016126 - sterol biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636816.1
GO:0004163 - diphosphomevalonate decarboxylase activity [Evidence IEA]
GO:0019287 - isopentenyl diphosphate biosynthetic process, mevalonate pathway [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636815.1
GO:0004496 - mevalonate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636814.1
GO:0004594 - pantothenate kinase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636813.1
WecB/TagA/CpsF family glycosyltransferase
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: similar to AA sequence:RefSeq:WP_003778518.1
GO:0004516 - nicotinate phosphoribosyltransferase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003778520.1
GO:0004359 - glutaminase activity [Evidence IEA]; GO:0003952 - NAD+ synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0008795 - NAD+ synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636805.1
GO:0008448 - N-acetylglucosamine-6-phosphate deacetylase activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]
N-acetylglucosamine-6-phosphate deacetylase
COORDINATES: similar to AA sequence:RefSeq:WP_004636803.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: protein motif:HMM:TIGR00350.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636797.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0070403 - NAD+ binding [Evidence IEA]; GO:0034979 - NAD-dependent protein deacetylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636794.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636791.1
YihY/virulence factor BrkB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004636789.1
COORDINATES: similar to AA sequence:RefSeq:WP_007721390.1
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636785.1
GO:0005198 - structural molecule activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013710105.1
COORDINATES: similar to AA sequence:RefSeq:WP_003778623.1
SUF system NifU family Fe-S cluster assembly protein
COORDINATES: similar to AA sequence:RefSeq:WP_003778625.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636776.1
COORDINATES: protein motif:HMM:NF021075.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636766.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636765.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010050586.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636763.1
GO:0003674 - molecular_function [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005605104.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636760.1
GO:0008932 - lytic endotransglycosylase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636759.1
GO:0004849 - uridine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014124986.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002365188.1
COORDINATES: protein motif:HMM:NF014600.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636752.1
GO:0008721 - D-serine ammonia-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0046416 - D-amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018658619.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636749.1
GO:0008360 - regulation of cell shape [Evidence IEA]
COORDINATES: protein motif:HMM:NF016019.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636745.1
GO:0000902 - cell morphogenesis [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00559
ribosomal protein L21 leader region; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_006907703.1
COORDINATES: protein motif:HMM:NF016233.2
ribosomal-processing cysteine protease Prp
COORDINATES: similar to AA sequence:RefSeq:WP_003776335.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636740.1
COORDINATES: similar to AA sequence:RefSeq:WP_016634900.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636736.1
DeoR/GlpR family DNA-binding transcription regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004636735.1
GO:0008662 - 1-phosphofructokinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636734.1
GO:0022877 - protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity [Evidence IEA]
fructose-specific PTS transporter subunit EIIC
COORDINATES: protein motif:HMM:NF025496.2
COORDINATES: similar to AA sequence:RefSeq:WP_002354983.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636730.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_000973215.1
COORDINATES: similar to AA sequence:RefSeq:WP_001830767.1
COORDINATES: similar to AA sequence:RefSeq:WP_010750598.1
COORDINATES: protein motif:HMM:NF013094.2
COORDINATES: similar to AA sequence:RefSeq:WP_013710380.1
COORDINATES: protein motif:HMM:NF015893.2
COORDINATES: protein motif:HMM:NF017226.2
COORDINATES: protein motif:HMM:NF017832.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636720.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025119.2
COORDINATES: protein motif:HMM:NF014038.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636717.1
COORDINATES: similar to AA sequence:RefSeq:WP_003776208.1
GO:0003951 - NAD+ kinase activity [Evidence IEA]
GO:0006741 - NADP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00005.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636714.1
COORDINATES: protein motif:HMM:NF025054.2
COORDINATES: similar to AA sequence:RefSeq:WP_003699544.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636711.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636710.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636709.1
GO:0005507 - copper ion binding [Evidence IEA]
GO:0055070 - copper ion homeostasis [Evidence IEA]
COORDINATES: protein motif:HMM:NF025298.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636704.1
nucleobase:cation symporter-2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004636703.1
COORDINATES: protein motif:HMM:NF018022.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636701.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636700.1
COORDINATES: similar to AA sequence:RefSeq:WP_003777888.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636698.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636697.1
COORDINATES: similar to AA sequence:RefSeq:WP_011222008.1
COORDINATES: protein motif:HMM:NF013258.2
GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: protein motif:HMM:NF016726.2
COORDINATES: protein motif:HMM:NF024242.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005233771.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636691.1
COORDINATES: protein motif:HMM:NF013697.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636689.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636688.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636687.1
COORDINATES: protein motif:HMM:TIGR01180.1
GO:0030246 - carbohydrate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636685.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636684.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636683.1
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
GO:0000413 - protein peptidyl-prolyl isomerization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636682.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636681.1
formylglycine-generating enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002335490.1
CvfD/Ygs/GSP13 family RNA-binding post-transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_002340398.1
GO:0004347 - glucose-6-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635595.1
cation diffusion facilitator family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_003129164.1
GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010050402.1
iron chelate uptake ABC transporter family permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004635598.1
COORDINATES: similar to AA sequence:RefSeq:WP_002372520.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635600.1
GO:0000286 - alanine dehydrogenase activity [Evidence IEA]
GO:0006522 - alanine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003776303.1
COORDINATES: protein motif:HMM:NF037527.2
COORDINATES: protein motif:HMM:NF016154.2
COORDINATES: similar to AA sequence:RefSeq:WP_015695450.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635921.1
COORDINATES: protein motif:HMM:TIGR04263.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635618.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635619.1
GO:0016020 - membrane [Evidence IEA]; GO:0005940 - septin ring [Evidence IEA]
GO:0000921 - septin ring assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635620.1
COORDINATES: similar to AA sequence:RefSeq:WP_006150037.1
GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635622.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: similar to AA sequence:RefSeq:WP_004635624.1
GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006810 - transport [Evidence IEA]
energy coupling factor transporter S component ThiW
COORDINATES: similar to AA sequence:RefSeq:WP_004635625.1
cell wall-active antibiotics response protein LiaF
COORDINATES: similar to AA sequence:RefSeq:WP_004635626.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635628.1
COORDINATES: similar to AA sequence:RefSeq:WP_010746766.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635631.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635637.1
lantibiotic protection ABC transporter ATP-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_018367150.1
COORDINATES: protein motif:HMM:NF024970.2
COORDINATES: protein motif:HMM:TIGR01167.1
GO:0009986 - cell surface [Evidence IEA]
LPXTG cell wall anchor domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004635649.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635652.1
winged helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF014368.2
COORDINATES: similar to AA sequence:RefSeq:WP_003036161.1
lactose-specific PTS transporter subunit IIA
COORDINATES: similar to AA sequence:RefSeq:WP_004048141.1
GO:0019197 - phosphoenolpyruvate-dependent sugar phosphotransferase complex [Evidence IEA]
GO:0015155 - lactose transmembrane transporter activity [Evidence IEA]
lactose-specific PTS transporter subunit EIIC
COORDINATES: similar to AA sequence:RefSeq:WP_003141170.1
GO:0009341 - beta-galactosidase complex [Evidence IEA]
GO:0004565 - beta-galactosidase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002361987.1
COORDINATES: similar to AA sequence:RefSeq:WP_003777276.1
GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635672.1
glycoside hydrolase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_000684740.1
galactose-6-phosphate isomerase subunit LacB
COORDINATES: similar to AA sequence:RefSeq:WP_002262463.1
galactose-6-phosphate isomerase subunit LacA
COORDINATES: similar to AA sequence:RefSeq:WP_004635684.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635685.1
COORDINATES: similar to AA sequence:RefSeq:WP_018366642.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635688.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635689.1
GO:0009025 - tagatose-bisphosphate aldolase activity [Evidence IEA]
GO:0019512 - lactose catabolic process via tagatose-6-phosphate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635695.1
GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
branched-chain amino acid transport system II carrier protein
COORDINATES: similar to AA sequence:RefSeq:WP_004635697.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_004635699.1
GO:0015293 - symporter activity [Evidence IEA]
cation:dicarboxylase symporter family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_004635702.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635704.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003141873.1
GO:0045250 - cytosolic pyruvate dehydrogenase complex [Evidence IEA]
GO:0004739 - pyruvate dehydrogenase (acetyl-transferring) activity [Evidence IEA]
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_016252109.1
alpha-ketoacid dehydrogenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_016527137.1
COORDINATES: similar to AA sequence:RefSeq:WP_010735668.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016648742.1
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: protein motif:HMM:NF012673.2
COORDINATES: similar to AA sequence:RefSeq:WP_003776414.1
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003776416.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635722.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635724.1
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: similar to AA sequence:RefSeq:WP_004635726.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004635728.1
COORDINATES: similar to AA sequence:RefSeq:WP_006728957.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635731.1
GO:0008965 - phosphoenolpyruvate-protein phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
phosphoenolpyruvate--protein phosphotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002287607.1
COORDINATES: similar to AA sequence:RefSeq:WP_010053390.1
GO:0008962 - phosphatidylglycerophosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635734.1
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003776223.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635736.1
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
nicotinate-nucleotide adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004635737.1
bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK
COORDINATES: similar to AA sequence:RefSeq:WP_007723087.1
GO:0043022 - ribosome binding [Evidence IEA]
GO:0017148 - negative regulation of translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: protein motif:HMM:NF010191.0
COORDINATES: protein motif:HMM:NF014657.2
COORDINATES: similar to AA sequence:RefSeq:WP_010053406.1
COORDINATES: protein motif:HMM:NF023305.2
COORDINATES: similar to AA sequence:RefSeq:WP_002414734.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO:0051302 - regulation of cell division [Evidence IEA]
division/cell wall cluster transcriptional repressor MraZ
COORDINATES: similar to AA sequence:RefSeq:WP_004635745.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: protein motif:HMM:TIGR02209.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635747.1
GO:0008658 - penicillin binding [Evidence IEA]
penicillin-binding transpeptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004635748.1
GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
phospho-N-acetylmuramoyl-pentapeptide- transferase
COORDINATES: similar to AA sequence:RefSeq:WP_004635749.1
GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
COORDINATES: similar to AA sequence:RefSeq:WP_004635750.1
GO:0050511 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity [Evidence IEA]
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
COORDINATES: protein motif:HMM:NF020067.2
FtsQ-type POTRA domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003640855.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0043093 - FtsZ-dependent cytokinesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635753.1
COORDINATES: protein motif:HMM:NF016363.2
GO:0090529 - cell septum assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635755.1
COORDINATES: protein motif:HMM:NF037631.2
COORDINATES: protein motif:HMM:NF016959.2
COORDINATES: similar to AA sequence:RefSeq:WP_004635758.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004047620.1
COORDINATES: similar to AA sequence:RefSeq:WP_003776632.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635761.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635762.1
COORDINATES: similar to AA sequence:RefSeq:WP_017369035.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635764.1
COORDINATES: protein motif:HMM:NF004226.0
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010746303.1
COORDINATES: similar to AA sequence:RefSeq:WP_002411157.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004635768.1
S1-like domain-containing RNA-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004635769.1
COORDINATES: similar to AA sequence:RefSeq:WP_016628927.1
GO:0009009 - site-specific recombinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635771.1
GO:0008973 - phosphopentomutase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003776565.1
COORDINATES: protein motif:HMM:NF014654.2
COORDINATES: similar to AA sequence:RefSeq:WP_004635774.1
GO:0005515 - protein binding [Evidence IEA]
GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635775.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00050
FMN riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_004635776.1
COORDINATES: protein motif:HMM:NF025846.2
COORDINATES: similar to AA sequence:RefSeq:WP_004635778.1
COORDINATES: similar to AA sequence:RefSeq:WP_003565353.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635780.1
GO:0004127 - cytidylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635781.1
COORDINATES: similar to AA sequence:RefSeq:WP_005878566.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003776586.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635785.1
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO:0006542 - glutamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003776593.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635791.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635793.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpX
COORDINATES: similar to AA sequence:RefSeq:WP_004635795.1
ribosome biogenesis GTP-binding protein YihA/YsxC
COORDINATES: protein motif:HMM:NF017051.2
COORDINATES: similar to AA sequence:RefSeq:WP_003126661.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635800.1
GO:0016891 - endoribonuclease activity, producing 5'-phosphomonoesters [Evidence IEA]
GO:0042779 - tRNA 3'-trailer cleavage [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00644.1
GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
single-stranded-DNA-specific exonuclease RecJ
COORDINATES: similar to AA sequence:RefSeq:WP_003776614.1
GO:0003999 - adenine phosphoribosyltransferase activity [Evidence IEA]
GO:0006168 - adenine salvage [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635807.1
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_018166659.1
thioredoxin fold domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016180172.1
GO:0006282 - regulation of DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635814.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635815.1
GO:0004802 - transketolase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013710705.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635819.1
1-acyl-sn-glycerol-3-phosphate acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_003776277.1
GlsB/YeaQ/YmgE family stress response membrane protein
COORDINATES: similar to AA sequence:RefSeq:WP_004635823.1
COORDINATES: protein motif:HMM:NF021617.2
5-bromo-4-chloroindolyl phosphate hydrolysis family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004635828.1
COORDINATES: similar to AA sequence:RefSeq:WP_003776284.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635831.1
GO:0008782 - adenosylhomocysteine nucleosidase activity [Evidence IEA]; GO:0008930 - methylthioadenosine nucleosidase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]; GO:0009164 - nucleoside catabolic process [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
5'-methylthioadenosine/adenosylhomocysteine nucleosidase
COORDINATES: similar to AA sequence:RefSeq:WP_016631211.1
GO:0016639 - oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635835.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004357 - glutamate-cysteine ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006750 - glutathione biosynthetic process [Evidence IEA]
bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB
COORDINATES: similar to AA sequence:RefSeq:WP_004635837.1
COORDINATES: similar to AA sequence:RefSeq:WP_003776355.1
COORDINATES: similar to AA sequence:RefSeq:WP_010013765.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016634127.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635845.1
isochorismatase family cysteine hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_003776931.1
DNA starvation/stationary phase protection protein
COORDINATES: similar to AA sequence:RefSeq:WP_015604767.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635852.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635854.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013700.2
COORDINATES: protein motif:HMM:NF012797.2
COORDINATES: similar to AA sequence:RefSeq:WP_004635861.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635865.1
COORDINATES: similar to AA sequence:RefSeq:WP_002358035.1
COORDINATES: similar to AA sequence:RefSeq:WP_015825501.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
phenylalanine--tRNA ligase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_004635870.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635872.1
COORDINATES: similar to AA sequence:RefSeq:WP_003778750.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635877.1
COORDINATES: similar to AA sequence:RefSeq:WP_003778753.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635880.1
GO:0008881 - glutamate racemase activity [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635881.1
GO:0047429 - nucleoside triphosphate diphosphatase activity [Evidence IEA]
GO:0009143 - nucleoside triphosphate catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00040.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635883.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635884.1
NFACT RNA binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003777003.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635886.1
COORDINATES: protein motif:HMM:NF019068.2
COORDINATES: similar to AA sequence:RefSeq:WP_004635888.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635889.1
COORDINATES: similar to AA sequence:RefSeq:WP_003776996.1
GO:0015075 - monoatomic ion transmembrane transporter activity [Evidence IEA]
GO:0034220 - monoatomic ion transmembrane transport [Evidence IEA]
monovalent cation/H+ antiporter complex subunit F
COORDINATES: similar to AA sequence:RefSeq:WP_003776994.1
monovalent cation/H(+) antiporter subunit G
COORDINATES: similar to AA sequence:RefSeq:WP_004635892.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635893.1
COORDINATES: similar to AA sequence:RefSeq:WP_003776987.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635895.1
proton-conducting transporter membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_003776982.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635897.1
GO:0004156 - dihydropteroate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635899.1
transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004635900.1
GO:0004518 - nuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635901.1
COORDINATES: protein motif:HMM:NF010725.0
COORDINATES: nucleotide motif:Rfam:14.4:RF00011
COORDINATES: protein motif:HMM:NF036878.2
COORDINATES: similar to AA sequence:RefSeq:WP_004635904.1
class I SAM-dependent RNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004635905.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635906.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012415.2
COORDINATES: similar to AA sequence:RefSeq:WP_004635908.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635909.1
COORDINATES: protein motif:HMM:TIGR00492.1
GO:0008784 - alanine racemase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635912.1
COORDINATES: protein motif:HMM:NF013782.2
GO:0016790 - thiolester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002301809.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635915.1
COORDINATES: similar to AA sequence:RefSeq:WP_010735633.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635917.1
dicarboxylate/amino acid:cation symporter
COORDINATES: similar to AA sequence:RefSeq:WP_004635918.1
NAD-dependent epimerase/dehydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004635919.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635920.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: protein motif:HMM:NF028519.2
COORDINATES: similar to AA sequence:RefSeq:WP_004635926.1
COORDINATES: similar to AA sequence:RefSeq:WP_002360606.1
COORDINATES: similar to AA sequence:RefSeq:WP_002337239.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635927.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635929.1
COORDINATES: protein motif:HMM:NF014298.2
COORDINATES: similar to AA sequence:RefSeq:WP_004635932.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635934.1
GO:0003678 - DNA helicase activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006268 - DNA unwinding involved in DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004635936.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF019175.2
COORDINATES: protein motif:HMM:TIGR00135.1
GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
COORDINATES: similar to AA sequence:RefSeq:WP_004635943.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
COORDINATES: similar to AA sequence:RefSeq:WP_010735264.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: similar to AA sequence:RefSeq:WP_004635947.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635949.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
COORDINATES: protein motif:HMM:NF013753.2
COORDINATES: similar to AA sequence:RefSeq:WP_004906036.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635955.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635957.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635958.1
COORDINATES: similar to AA sequence:RefSeq:WP_006908081.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_003142315.1
COORDINATES: similar to AA sequence:RefSeq:WP_002344910.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019118581.1
COORDINATES: similar to AA sequence:RefSeq:WP_000793096.1
COORDINATES: similar to AA sequence:RefSeq:WP_009431731.1
COORDINATES: similar to AA sequence:RefSeq:WP_017645363.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006740602.1
type IV secretory system conjugative DNA transfer family protein
COORDINATES: similar to AA sequence:RefSeq:WP_000567888.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003145044.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_016648519.1
COORDINATES: similar to AA sequence:RefSeq:WP_013710819.1
COORDINATES: similar to AA sequence:RefSeq:WP_006702358.1
COORDINATES: similar to AA sequence:RefSeq:WP_005956877.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635978.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635980.1
COORDINATES: similar to AA sequence:RefSeq:WP_015777638.1
CadD family cadmium resistance transporter
COORDINATES: similar to AA sequence:RefSeq:WP_014634715.1
COORDINATES: similar to AA sequence:RefSeq:WP_003049789.1
LysM peptidoglycan-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019722570.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636024.1
COORDINATES: similar to AA sequence:RefSeq:WP_002346894.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004636027.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636028.1
competence type IV pilus assembly protein ComGB
COORDINATES: similar to AA sequence:RefSeq:WP_004636029.1
competence type IV pilus major pilin ComGC
COORDINATES: protein motif:HMM:NF040982.1
competence type IV pilus minor pilin ComGD
COORDINATES: protein motif:HMM:NF041002.1
competence type IV pilus minor pilin ComGF
COORDINATES: similar to AA sequence:RefSeq:WP_005225769.1
COORDINATES: similar to AA sequence:RefSeq:WP_004047589.1
COORDINATES: similar to AA sequence:RefSeq:WP_013710293.1
Asp23/Gls24 family envelope stress response protein
COORDINATES: protein motif:HMM:TIGR01951.1
transcription antitermination factor NusB
COORDINATES: similar to AA sequence:RefSeq:WP_004636038.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018378498.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636040.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636041.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636042.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636044.1
GO:0050661 - NADP binding [Evidence IEA]; GO:0004616 - phosphogluconate dehydrogenase (decarboxylating) activity [Evidence IEA]
NADP-dependent phosphogluconate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_013711831.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636046.1
COORDINATES: similar to AA sequence:RefSeq:WP_010763438.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636048.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636049.1
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636050.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636051.1
bifunctional oligoribonuclease/PAP phosphatase NrnA
COORDINATES: similar to AA sequence:RefSeq:WP_004636052.1
COORDINATES: similar to AA sequence:RefSeq:WP_003776093.1
COORDINATES: protein motif:HMM:NF024258.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636056.1
COORDINATES: protein motif:HMM:NF025002.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636059.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636060.1
COORDINATES: protein motif:HMM:NF017759.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636062.1
COORDINATES: similar to AA sequence:RefSeq:WP_003776112.1
GO:0008176 - tRNA (guanine-N7-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(46)-N7)-methyltransferase TrmB
COORDINATES: similar to AA sequence:RefSeq:WP_004636064.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636065.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636066.1
DUF4479 and tRNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004636068.1
GO:0008763 - UDP-N-acetylmuramate-L-alanine ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021126.2
COORDINATES: similar to AA sequence:RefSeq:WP_017144400.1
COORDINATES: protein motif:HMM:NF016060.2
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636070.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636073.1
COORDINATES: protein motif:HMM:NF026247.2
COORDINATES: protein motif:HMM:NF013080.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636076.1
COORDINATES: protein motif:HMM:NF016351.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636079.1
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
asparagine synthase (glutamine-hydrolyzing)
COORDINATES: protein motif:HMM:NF013740.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636081.1
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636084.1
COORDINATES: protein motif:HMM:NF012730.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636086.1
COORDINATES: protein motif:HMM:NF012790.2
rhodanese-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004636092.1
GO:0003844 - 1,4-alpha-glucan branching enzyme activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636094.1
GO:0008878 - glucose-1-phosphate adenylyltransferase activity [Evidence IEA]
GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02092.1
glucose-1-phosphate adenylyltransferase subunit GlgD
COORDINATES: similar to AA sequence:RefSeq:WP_004636100.1
GO:0004373 - glycogen (starch) synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636102.1
glycogen/starch/alpha-glucan phosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_004636104.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636106.1
COORDINATES: similar to AA sequence:RefSeq:WP_004899857.1
COORDINATES: protein motif:HMM:NF021434.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636111.1
COORDINATES: similar to AA sequence:RefSeq:WP_006701208.1
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
GO:0043096 - purine nucleobase salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636115.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636118.1
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636119.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636121.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636122.1
tryptophan ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004636124.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636126.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636128.1
COORDINATES: protein motif:HMM:NF006830.0
GO:0004417 - hydroxyethylthiazole kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014022.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636137.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636139.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636141.1
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: similar to AA sequence:RefSeq:WP_002314209.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636147.1
COORDINATES: protein motif:HMM:NF024898.2
COORDINATES: protein motif:HMM:NF012297.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636169.1
GO:0008374 - O-acyltransferase activity [Evidence IEA]
GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]
glycerol-3-phosphate 1-O-acyltransferase PlsY
COORDINATES: similar to AA sequence:RefSeq:WP_004636170.1
GO:0009340 - DNA topoisomerase IV complex [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636171.1
COORDINATES: similar to AA sequence:RefSeq:WP_005236804.1
GO:0008861 - formate C-acetyltransferase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636173.1
GO:0043365 - [formate-C-acetyltransferase]-activating enzyme activity [Evidence IEA]
pyruvate formate-lyase-activating protein
COORDINATES: similar to AA sequence:RefSeq:WP_004636174.1
GO:0004427 - inorganic diphosphate phosphatase activity [Evidence IEA]
manganese-dependent inorganic pyrophosphatase
COORDINATES: protein motif:HMM:NF022112.2
COORDINATES: protein motif:HMM:NF016121.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636180.1
GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017798.2
GTP-sensing transcriptional pleiotropic repressor CodY
COORDINATES: similar to AA sequence:RefSeq:WP_015076303.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
ATP-dependent protease ATPase subunit HslU
COORDINATES: similar to AA sequence:RefSeq:WP_004636183.1
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004298 - threonine-type endopeptidase activity [Evidence IEA]
HslU--HslV peptidase proteolytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004636184.1
COORDINATES: similar to AA sequence:RefSeq:WP_003126977.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636186.1
GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003776815.1
COORDINATES: similar to AA sequence:RefSeq:WP_004262406.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636189.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636190.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:NF021854.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636192.1
COORDINATES: similar to AA sequence:RefSeq:WP_013710810.1
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
GO:0000724 - double-strand break repair via homologous recombination [Evidence IEA]
COORDINATES: protein motif:HMM:NF024117.2
COORDINATES: similar to AA sequence:RefSeq:WP_010767552.1
GO:0045148 - tripeptide aminopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00486.1
GO:0051540 - metal cluster binding [Evidence IEA]
Nif3-like dinuclear metal center hexameric protein
COORDINATES: similar to AA sequence:RefSeq:WP_002374560.1
tRNA (adenine(22)-N(1))-methyltransferase TrmK
COORDINATES: similar to AA sequence:RefSeq:WP_004636198.1
GO:0008097 - 5S rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018658824.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636200.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636201.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636202.1
COORDINATES: protein motif:HMM:TIGR00211.2
GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636205.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636208.1
COORDINATES: similar to AA sequence:RefSeq:WP_013710793.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015076446.1
GO:0004126 - cytidine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0009972 - cytidine deamination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636215.1
COORDINATES: similar to AA sequence:RefSeq:WP_010740019.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636219.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636220.1
COORDINATES: similar to AA sequence:RefSeq:WP_016182387.1
COORDINATES: similar to AA sequence:RefSeq:WP_010019742.1
COORDINATES: similar to AA sequence:RefSeq:WP_013710785.1
COORDINATES: similar to AA sequence:RefSeq:WP_003776758.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636234.1
GO:0004340 - glucokinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003776753.1
rhomboid family intramembrane serine protease
COORDINATES: similar to AA sequence:RefSeq:WP_004636238.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636241.1
COORDINATES: similar to AA sequence:RefSeq:WP_002298541.1
COORDINATES: similar to AA sequence:RefSeq:WP_016609146.1
COORDINATES: similar to AA sequence:RefSeq:WP_007722217.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636250.1
COORDINATES: similar to AA sequence:RefSeq:WP_003778881.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636253.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636255.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636257.1
GO:0051205 - protein insertion into membrane [Evidence IEA]
COORDINATES: protein motif:HMM:NF018406.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636263.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636264.1
GO:0004345 - glucose-6-phosphate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014024829.1
tRNA (cytidine(34)-2'-O)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004636271.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636273.1
COORDINATES: similar to AA sequence:RefSeq:WP_016175427.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636278.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636279.1
GO:0006282 - regulation of DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636281.1
COORDINATES: similar to AA sequence:RefSeq:WP_005605304.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: similar to AA sequence:RefSeq:WP_004636285.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636286.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636287.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013670.2
GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636289.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636295.1
COORDINATES: protein motif:HMM:NF013397.2
formate/nitrite transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006418638.1
GO:0019843 - rRNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002297399.1
COORDINATES: similar to AA sequence:RefSeq:WP_018658691.1
ribosomal L7Ae/L30e/S12e/Gadd45 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003141014.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636301.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636302.1
GO:0042274 - ribosomal small subunit biogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636303.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010752132.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]; GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003776653.1
COORDINATES: similar to AA sequence:RefSeq:WP_003776651.1
COORDINATES: similar to AA sequence:RefSeq:WP_010622265.1
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636308.1
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003776636.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005875937.1
GO:0033862 - UMP kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018184.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636314.1
GO:0004416 - hydroxyacylglutathione hydrolase activity [Evidence IEA]
GO:0019243 - methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636316.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636317.1
GO:0052906 - tRNA (guanine(37)-N(1))-methyltransferase activity [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: similar to AA sequence:RefSeq:WP_004636318.1
Essential for efficient processing of 16S rRNA; Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018658739.1
COORDINATES: similar to AA sequence:RefSeq:WP_013668726.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636321.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636322.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636323.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: similar to AA sequence:RefSeq:WP_004636325.1
GO:0030261 - chromosome condensation [Evidence IEA]; GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003778988.1
COORDINATES: similar to AA sequence:RefSeq:WP_016618350.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636328.1
COORDINATES: similar to AA sequence:RefSeq:WP_008379632.1
GO:0004799 - thymidylate synthase activity [Evidence IEA]
GO:0006231 - dTMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636330.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636331.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636333.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636335.1
COORDINATES: protein motif:HMM:NF013884.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636341.1
COORDINATES: protein motif:HMM:NF013632.2
COORDINATES: similar to AA sequence:RefSeq:WP_010763042.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636347.1
COORDINATES: similar to AA sequence:RefSeq:WP_013710735.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636351.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636352.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636354.1
COORDINATES: similar to AA sequence:RefSeq:WP_016182991.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636359.1
COORDINATES: protein motif:HMM:TIGR00331.1
GO:0009408 - response to heat [Evidence IEA]
heat-inducible transcriptional repressor HrcA
COORDINATES: similar to AA sequence:RefSeq:WP_004636363.1
GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
GO:0006747 - FAD biosynthetic process [Evidence IEA]; GO:0009398 - FMN biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010740323.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012861.2
ClC family H(+)/Cl(-) exchange transporter
COORDINATES: similar to AA sequence:RefSeq:WP_003778916.1
COORDINATES: similar to AA sequence:RefSeq:WP_006908139.1
GO:0004375 - glycine dehydrogenase (decarboxylating) activity [Evidence IEA]
GO:0006546 - glycine catabolic process [Evidence IEA]
aminomethyl-transferring glycine dehydrogenase subunit GcvPB
COORDINATES: similar to AA sequence:RefSeq:WP_004636374.1
aminomethyl-transferring glycine dehydrogenase subunit GcvPA
COORDINATES: similar to AA sequence:RefSeq:WP_004636375.1
GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636377.1
GO:0004047 - aminomethyltransferase activity [Evidence IEA]
glycine cleavage system aminomethyltransferase GcvT
COORDINATES: similar to AA sequence:RefSeq:WP_004636379.1
GO:0016805 - dipeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00196.1
GO:0052855 - ADP-dependent NAD(P)H-hydrate dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636387.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636390.1
COORDINATES: similar to AA sequence:RefSeq:WP_016176332.1
COORDINATES: similar to AA sequence:RefSeq:WP_001846105.1
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: protein motif:HMM:NF019246.2
YkoF family thiamine/hydroxymethylpyrimidine-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015057708.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF020452.2
GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636400.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636401.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024700.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636403.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010053887.1
bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_004636406.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636407.1
50S ribosomal protein L11 methyltransferase
COORDINATES: protein motif:HMM:NF022663.2
COORDINATES: protein motif:HMM:NF014740.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636410.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0003979 - UDP-glucose 6-dehydrogenase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636411.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636412.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636413.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636414.1
GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636417.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015587.2
COORDINATES: similar to AA sequence:RefSeq:WP_010051701.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636421.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636422.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
ABC transporter transmembrane domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004636424.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636425.1
COORDINATES: protein motif:HMM:NF018914.2
COORDINATES: similar to AA sequence:RefSeq:WP_003776129.1
GO:0140110 - transcription regulator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016897725.1
GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004636429.1
GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016622796.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636443.1
COORDINATES: protein motif:HMM:NF024091.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636446.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636447.1
GO:0008808 - cardiolipin synthase activity [Evidence IEA]
GO:0032049 - cardiolipin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636448.1
COORDINATES: protein motif:HMM:TIGR00121.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636450.1
replication-associated recombination protein A
COORDINATES: nucleotide motif:Rfam:14.4:RF00013
COORDINATES: similar to AA sequence:RefSeq:WP_013710492.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636452.1
COORDINATES: protein motif:HMM:TIGR01613.1
COORDINATES: protein motif:HMM:NF020811.2
COORDINATES: protein motif:HMM:NF021206.2
COORDINATES: similar to AA sequence:RefSeq:WP_003027791.1
COORDINATES: protein motif:HMM:NF024252.2
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636453.1
COORDINATES: similar to AA sequence:RefSeq:WP_018371606.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_004636435.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636456.1
COORDINATES: similar to AA sequence:RefSeq:WP_016172457.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636460.1
COORDINATES: similar to AA sequence:RefSeq:WP_018659825.1
COORDINATES: protein motif:HMM:NF013117.2
mechanosensitive ion channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004636469.1
COORDINATES: protein motif:HMM:NF015558.2
putative sulfate exporter family transporter
COORDINATES: protein motif:HMM:NF024490.2
phospholipase D-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004636485.1
GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015076275.1
COORDINATES: similar to AA sequence:RefSeq:WP_003126926.1
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF037662.2
COORDINATES: protein motif:HMM:TIGR01407.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
helicase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004636495.1
GO:0001680 - tRNA 3'-terminal CCA addition [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636496.1
COORDINATES: protein motif:HMM:NF002965.0
ReoY family proteolytic degradation factor
COORDINATES: similar to AA sequence:RefSeq:WP_004636500.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636502.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002289402.1
GO:0009368 - endopeptidase Clp complex [Evidence IEA]
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
ATP-dependent Clp endopeptidase proteolytic subunit ClpP
COORDINATES: similar to AA sequence:RefSeq:WP_004636508.1
GO:0043937 - regulation of sporulation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636509.1
uridine diphosphate-N-acetylglucosamine-binding protein YvcK
COORDINATES: similar to AA sequence:RefSeq:WP_002355625.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636513.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636514.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636516.1
GO:0009331 - glycerol-3-phosphate dehydrogenase complex [Evidence IEA]
GO:0047952 - glycerol-3-phosphate dehydrogenase [NAD(P)+] activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
GO:0046168 - glycerol-3-phosphate catabolic process [Evidence IEA]
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_004636517.1
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: similar to AA sequence:RefSeq:WP_004636518.1
GO:0016791 - phosphatase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636519.1
COORDINATES: protein motif:HMM:NF015957.2
COORDINATES: similar to AA sequence:RefSeq:WP_018659346.1
COORDINATES: protein motif:HMM:NF038025.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636524.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636526.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636527.1
COORDINATES: protein motif:HMM:NF014841.2
COORDINATES: protein motif:HMM:NF013122.2
GO:0004521 - endoribonuclease activity [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
type I-E CRISPR-associated endoribonuclease Cas2e
COORDINATES: similar to AA sequence:RefSeq:WP_010495836.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0051607 - defense response to virus [Evidence IEA]; GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
type I-E CRISPR-associated endonuclease Cas1e
COORDINATES: similar to AA sequence:RefSeq:WP_003088897.1
type I-E CRISPR-associated protein Cas6/Cse3/CasE
COORDINATES: similar to AA sequence:RefSeq:WP_019776151.1
type I-E CRISPR-associated protein Cas5/CasD
COORDINATES: similar to AA sequence:RefSeq:WP_009310571.1
type I-E CRISPR-associated protein Cas7/Cse4/CasC
COORDINATES: protein motif:HMM:TIGR02548.1
type I-E CRISPR-associated protein Cse2/CasB
COORDINATES: protein motif:HMM:NF021030.2
type I-E CRISPR-associated protein Cse1/CasA
COORDINATES: similar to AA sequence:RefSeq:WP_019787552.1
GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014717.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636534.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636537.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636538.1
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004636539.1
GO:0016832 - aldehyde-lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015768.2
PTS glucitol/sorbitol transporter subunit IIA
COORDINATES: similar to AA sequence:RefSeq:WP_004636541.1
PTS glucitol/sorbitol transporter subunit IIB
COORDINATES: similar to AA sequence:RefSeq:WP_010758706.1
PTS glucitol/sorbitol transporter subunit IIC
COORDINATES: protein motif:HMM:NF018611.2
COORDINATES: protein motif:HMM:NF013070.2
COORDINATES: similar to AA sequence:RefSeq:WP_019862015.1
sorbitol-6-phosphate dehydrogenase subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004636546.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636547.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636549.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636550.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636551.1
GO:0015558 - secondary active p-aminobenzoyl-glutamate transmembrane transporter activity [Evidence IEA]
GO:1902604 - p-aminobenzoyl-glutamate transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636552.1
COORDINATES: similar to AA sequence:RefSeq:WP_003705538.1
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: similar to AA sequence:RefSeq:WP_005227133.1
COORDINATES: similar to AA sequence:RefSeq:WP_003776537.1
COORDINATES: similar to AA sequence:RefSeq:WP_012027759.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636557.1
COORDINATES: similar to AA sequence:RefSeq:WP_006703534.1
GO:0000036 - acyl carrier activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636559.1
GO:0043811 - phosphate:acyl-[acyl carrier protein] acyltransferase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636560.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002354936.1
COORDINATES: similar to AA sequence:RefSeq:WP_016250800.1
COORDINATES: similar to AA sequence:RefSeq:WP_014614133.1
COORDINATES: protein motif:HMM:TIGR01378.1
GO:0004788 - thiamine diphosphokinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636565.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636566.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: similar to AA sequence:RefSeq:WP_004636567.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
Stk1 family PASTA domain-containing Ser/Thr kinase
COORDINATES: protein motif:HMM:NF033484.1
GO:0004722 - protein serine/threonine phosphatase activity [Evidence IEA]
GO:0006470 - protein dephosphorylation [Evidence IEA]
Stp1/IreP family PP2C-type Ser/Thr phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_004636569.1
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0001510 - RNA methylation [Evidence IEA]
16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
COORDINATES: similar to AA sequence:RefSeq:WP_004636570.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002378816.1
GO:0032508 - DNA duplex unwinding [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636572.1
GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
COORDINATES: similar to AA sequence:RefSeq:WP_003776502.1
DNA-directed RNA polymerase subunit omega
COORDINATES: similar to AA sequence:RefSeq:WP_018658885.1
GO:0004385 - guanylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005878387.1
COORDINATES: similar to AA sequence:RefSeq:WP_003776492.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636583.1
COORDINATES: similar to AA sequence:RefSeq:WP_013710600.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636585.1
COORDINATES: protein motif:HMM:NF014093.2
GO:0033178 - proton-transporting two-sector ATPase complex, catalytic domain [Evidence IEA]
GO:0046961 - proton-transporting ATPase activity, rotational mechanism [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]
V-type ATP synthase subunit E family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003776483.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636591.1
COORDINATES: nucleotide motif:Rfam:14.4:RF03071
sodium ion sensor (DUF1646 type); this cis-regulatory element may regulate processes involved in with the transportation of sodium ions; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_004636596.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636599.1
osmoprotectant ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004636601.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636602.1
betaine/proline/choline family ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004636605.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636607.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: similar to AA sequence:RefSeq:WP_004636608.1
GO:0009379 - Holliday junction helicase complex [Evidence IEA]
GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration protein RuvA
COORDINATES: similar to AA sequence:RefSeq:WP_010736836.1
GO:0033743 - peptide-methionine (R)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (R)-S-oxide reductase MsrB
COORDINATES: similar to AA sequence:RefSeq:WP_004636612.1
GO:0032300 - mismatch repair complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
GO:0006298 - mismatch repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636614.1
COORDINATES: similar to AA sequence:RefSeq:WP_002311354.1
GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004636619.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636620.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636622.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636624.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636627.1
GO:0008997 - ribonuclease R activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: similar to AA sequence:RefSeq:WP_010020475.1
COORDINATES: protein motif:HMM:NF014844.2
COORDINATES: similar to AA sequence:RefSeq:WP_016647925.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636633.1
COORDINATES: similar to AA sequence:RefSeq:WP_018659394.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00200.1
CinA family nicotinamide mononucleotide deamidase-related protein
COORDINATES: similar to AA sequence:RefSeq:WP_004636636.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: protein motif:HMM:NF024805.2
COORDINATES: similar to AA sequence:RefSeq:WP_003776045.1
COORDINATES: protein motif:HMM:NF017044.2
COORDINATES: similar to AA sequence:RefSeq:WP_004636640.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF01767
SMK box riboswitch (SAM-III) riboswitch; SAM riboswitches modulate the expression of downstream genes in response to levels of S-adenosylmethionine; SMK box riboswitch shares no known similarity to SAM-I and SAM-II; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_004636643.1
folate family ECF transporter S component
COORDINATES: similar to AA sequence:RefSeq:WP_004636644.1
GO:0015572 - N-acetylglucosamine transmembrane transporter activity [Evidence IEA]
N-acetylglucosamine-specific PTS transporter subunit IIBC
COORDINATES: similar to AA sequence:RefSeq:WP_016171302.1
COORDINATES: similar to AA sequence:RefSeq:WP_004636646.1
COORDINATES: similar to AA sequence:RefSeq:WP_003135908.1
PTS galactosamine transporter subunit IIB
COORDINATES: similar to AA sequence:RefSeq:WP_016171299.1
COORDINATES: protein motif:HMM:NF015567.2
COORDINATES: similar to AA sequence:RefSeq:WP_016174565.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016897453.1
GO:0046537 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity [Evidence IEA]
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
COORDINATES: similar to AA sequence:RefSeq:WP_003087526.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005228679.1
COORDINATES: similar to AA sequence:RefSeq:WP_003778589.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634498.1
COORDINATES: protein motif:HMM:NF024853.2
COORDINATES: similar to AA sequence:RefSeq:WP_004634502.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006907449.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634504.1
COORDINATES: protein motif:HMM:NF039905.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634507.1
COORDINATES: similar to AA sequence:RefSeq:WP_003710514.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0051775 - response to redox state [Evidence IEA]
redox-sensing transcriptional repressor Rex
COORDINATES: similar to AA sequence:RefSeq:WP_004634510.1
COORDINATES: protein motif:HMM:NF019850.2
COORDINATES: similar to AA sequence:RefSeq:WP_004634515.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634520.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634522.1
COORDINATES: protein motif:HMM:TIGR02364.1
GO:0047324 - phosphoenolpyruvate-glycerone phosphotransferase activity [Evidence IEA]
dihydroxyacetone kinase phosphoryl donor subunit DhaM
COORDINATES: similar to AA sequence:RefSeq:WP_004634526.1
GO:0004371 - glycerone kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010779237.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634530.1
GO:0004368 - glycerol-3-phosphate dehydrogenase (quinone) activity [Evidence IEA]
GO:0006072 - glycerol-3-phosphate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004634533.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004634540.1
COORDINATES: similar to AA sequence:RefSeq:WP_003779104.1
GO:1902560 - GMP reductase complex [Evidence IEA]
GO:0003920 - GMP reductase activity [Evidence IEA]
GO:0006163 - purine nucleotide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003779101.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634546.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634547.1
GO:0050380 - undecaprenyl-diphosphatase activity [Evidence IEA]
GO:0016311 - dephosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004634549.1
COORDINATES: similar to AA sequence:RefSeq:WP_006309569.1
flotillin-like protein involved in membrane lipid rafts; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009560514.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013711536.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634559.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634564.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0015446 - ATPase-coupled arsenite transmembrane transporter activity [Evidence IEA]
GO:0071722 - detoxification of arsenic-containing substance [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004634566.1
arsenite efflux transporter metallochaperone ArsD
COORDINATES: similar to AA sequence:RefSeq:WP_003142512.1
COORDINATES: protein motif:HMM:TIGR00545.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634572.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016992 - lipoate synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009107 - lipoate biosynthetic process [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF02683
NiCo riboswitches sense nickel or cobalt ions; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_004634574.1
GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006907568.1
COORDINATES: protein motif:HMM:NF016839.2
septum formation initiator family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004634579.1
RNA-binding S4 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004634581.1
MazG nucleotide pyrophosphohydrolase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004634583.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003779165.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634588.1
COORDINATES: similar to AA sequence:RefSeq:WP_003127853.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634597.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0004362 - glutathione-disulfide reductase (NADPH) activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0006749 - glutathione metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013711414.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634600.1
COORDINATES: similar to AA sequence:RefSeq:WP_014124055.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634604.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634606.1
COORDINATES: similar to AA sequence:RefSeq:WP_010053989.1
GO:0004749 - ribose phosphate diphosphokinase activity [Evidence IEA]
GO:0009156 - ribonucleoside monophosphate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004634610.1
GO:0019134 - glucosamine-1-phosphate N-acetyltransferase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0003977 - UDP-N-acetylglucosamine diphosphorylase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]; GO:0006048 - UDP-N-acetylglucosamine biosynthetic process [Evidence IEA]
bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU
COORDINATES: similar to AA sequence:RefSeq:WP_004634612.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0045982 - negative regulation of purine nucleobase metabolic process [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004634614.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0009374 - biotin binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004736 - pyruvate carboxylase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004634616.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634618.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634620.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634623.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634625.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634627.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634628.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634630.1
bifunctional UDP-sugar hydrolase/5'-nucleotidase
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: similar to AA sequence:RefSeq:WP_004634636.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634637.1
GO:0004489 - methylenetetrahydrofolate reductase (NAD(P)H) activity [Evidence IEA]
GO:0009086 - methionine biosynthetic process [Evidence IEA]
methylenetetrahydrofolate reductase [NAD(P)H]
COORDINATES: similar to AA sequence:RefSeq:WP_010763924.1
GO:0003871 - 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0008652 - amino acid biosynthetic process [Evidence IEA]; GO:0009086 - methionine biosynthetic process [Evidence IEA]
5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase
COORDINATES: protein motif:HMM:NF016296.2
COORDINATES: similar to AA sequence:RefSeq:WP_001045233.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004818439.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006738363.1
acyl-CoA thioester hydrolase/BAAT C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002836657.1
COORDINATES: protein motif:HMM:NF024116.2
COORDINATES: similar to AA sequence:RefSeq:WP_002310780.1
COORDINATES: protein motif:HMM:NF025636.2
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004634657.1
GO:0043822 - ribonuclease M5 activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004634659.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634660.1
class I SAM-dependent rRNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004634662.1
COORDINATES: similar to AA sequence:RefSeq:WP_003778056.1
COORDINATES: similar to AA sequence:RefSeq:WP_010054334.1
COORDINATES: similar to AA sequence:RefSeq:WP_019722840.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF020784.2
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004634674.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: protein motif:HMM:NF024727.2
COORDINATES: similar to AA sequence:RefSeq:WP_016177703.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000049 - tRNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF018816.2
COORDINATES: similar to AA sequence:RefSeq:WP_004634682.1
COORDINATES: similar to AA sequence:RefSeq:WP_003777857.1
COORDINATES: similar to AA sequence:RefSeq:WP_003777844.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634688.1
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01143.1
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
COORDINATES: similar to AA sequence:RefSeq:WP_004634692.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008716 - D-alanine-D-alanine ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004634694.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004335 - galactokinase activity [Evidence IEA]
GO:0046835 - carbohydrate phosphorylation [Evidence IEA]; GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013431.2
COORDINATES: protein motif:HMM:NF014850.2
glycoside hydrolase family 2 TIM barrel-domain containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003777830.1
COORDINATES: similar to AA sequence:RefSeq:WP_013669425.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016634688.1
GO:0019277 - UDP-N-acetylgalactosamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006703086.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634708.1
oligopeptide ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004634709.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634710.1
COORDINATES: protein motif:HMM:NF013539.2
COORDINATES: protein motif:HMM:NF013986.2
BadF/BadG/BcrA/BcrD ATPase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019335834.1
MupG family TIM beta-alpha barrel fold protein
COORDINATES: similar to AA sequence:RefSeq:WP_016182454.1
GO:0016835 - carbon-oxygen lyase activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009254 - peptidoglycan turnover [Evidence IEA]
N-acetylmuramic acid 6-phosphate etherase
COORDINATES: similar to AA sequence:RefSeq:WP_010736980.1
COORDINATES: protein motif:HMM:NF014326.2
PTS lactose/cellobiose transporter subunit IIA
COORDINATES: similar to AA sequence:RefSeq:WP_014124573.1
COORDINATES: similar to AA sequence:RefSeq:WP_010734951.1
COORDINATES: similar to AA sequence:RefSeq:WP_002914360.1
COORDINATES: similar to AA sequence:RefSeq:WP_016176301.1
COORDINATES: similar to AA sequence:RefSeq:WP_003073299.1
COORDINATES: similar to AA sequence:RefSeq:WP_016176305.1
COORDINATES: similar to AA sequence:RefSeq:WP_019770920.1
COORDINATES: similar to AA sequence:RefSeq:WP_004224548.1
COORDINATES: similar to AA sequence:RefSeq:WP_003088321.1
COORDINATES: similar to AA sequence:RefSeq:WP_002367389.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634721.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634722.1
COORDINATES: similar to AA sequence:RefSeq:WP_010770339.1
GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004634724.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007724288.1
COORDINATES: protein motif:HMM:NF013465.2
COORDINATES: similar to AA sequence:RefSeq:WP_010623213.1
COORDINATES: similar to AA sequence:RefSeq:WP_003776741.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634729.1
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
phenylalanine--tRNA ligase beta subunit-related protein
COORDINATES: protein motif:HMM:NF012952.2
COORDINATES: similar to AA sequence:RefSeq:WP_014638190.1
GO:0008804 - carbamate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004634733.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634734.1
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004634735.1
GO:0016990 - arginine deiminase activity [Evidence IEA]
GO:0019546 - arginine deiminase pathway [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004634736.1
COORDINATES: similar to AA sequence:RefSeq:WP_002356564.1
COORDINATES: protein motif:HMM:NF014788.2
COORDINATES: similar to AA sequence:RefSeq:WP_003557252.1
phosphoribosylformylglycinamidine synthase subunit PurQ
COORDINATES: similar to AA sequence:RefSeq:WP_018370398.1
COORDINATES: protein motif:HMM:TIGR01525.1
COORDINATES: similar to AA sequence:RefSeq:WP_003142276.1
class II fructose-1,6-bisphosphate aldolase
COORDINATES: similar to AA sequence:RefSeq:WP_004634743.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634744.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004634747.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634748.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634749.1
magnesium transporter CorA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004634750.1
DNA-directed RNA polymerase subunit delta
COORDINATES: protein motif:HMM:NF020711.2
COORDINATES: similar to AA sequence:RefSeq:WP_004634752.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634753.1
COORDINATES: protein motif:HMM:NF007806.0
COORDINATES: protein motif:HMM:NF012931.2
COORDINATES: similar to AA sequence:RefSeq:WP_004634756.1
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: similar to AA sequence:RefSeq:WP_004634757.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012970.2
COORDINATES: similar to AA sequence:RefSeq:WP_004634760.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634761.1
COORDINATES: similar to AA sequence:RefSeq:WP_003590455.1
membrane protein insertion efficiency factor YidD
COORDINATES: similar to AA sequence:RefSeq:WP_003777089.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634764.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634766.1
COORDINATES: protein motif:HMM:NF021489.2
COORDINATES: similar to AA sequence:RefSeq:WP_007208783.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634769.1
COORDINATES: similar to AA sequence:RefSeq:WP_018658775.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634771.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634772.1
methionine ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004634773.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634774.1
COORDINATES: similar to AA sequence:RefSeq:WP_002375087.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634776.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634778.1
COORDINATES: protein motif:HMM:NF024923.2
efflux RND transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF033488.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634785.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634789.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634791.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634793.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634802.1
COORDINATES: similar to AA sequence:RefSeq:WP_019253647.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_003778135.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634810.1
tRNA1(Val) (adenine(37)-N6)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004634811.1
DNA replication initiation control protein YabA
COORDINATES: protein motif:HMM:TIGR00678.1
COORDINATES: similar to AA sequence:RefSeq:WP_002356367.1
COORDINATES: similar to AA sequence:RefSeq:WP_004634818.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004634820.1
COORDINATES: similar to AA sequence:RefSeq:WP_003778148.1
YbaB/EbfC family nucleoid-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_004634824.1
COORDINATES: protein motif:HMM:NF037997.1
GO:0015114 - phosphate ion transmembrane transporter activity [Evidence IEA]; GO:0005436 - sodium:phosphate symporter activity [Evidence IEA]
GO:0035435 - phosphate ion transmembrane transport [Evidence IEA]; GO:0044341 - sodium-dependent phosphate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF014010.2