Oenanthe melanoleuca isolate GR-GAL-2019-014 chromosome 12, OMel1.0, whole genome shotgun sequence.
type: Entry
definition: Oenanthe melanoleuca isolate GR-GAL-2019-014 chromosome 12, OMel1.0, whole genome shotgun sequence.
sequence version: NC_079346.1
sequence date: 2023-05-28
sequence: sequence
division: CON
label: NC_079346.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA975542
dblink: SAMN33408179
keyword: WGS
keyword: RefSeq
source: Oenanthe melanoleuca
organism: Oenanthe melanoleuca
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Oenanthe.
reference: 1
references: 37097035
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM055926.1.\nAssembly name: OMel1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Swiss Ornithological\nInstitute on 2023/04/06. The original whole-genome shotgun project\nhas the accession JARJVX000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Swiss Ornithological Institute\nAssembly Method :: FALCON-Unzip v. 0.5\nAssembly Name :: OMel1.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: PacBio Sequel; Illumina NovaSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_029582105.1-RS_2023_05\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 05/24/2023\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 20597361
topology: linear
so has quality: SO_0000987
location: 1..20597361
location: region:1-20597361:1
RO_0002162: 2939378

NC_079346
type: RefSeq
SIO_000068: refseq

PRJNA975542
type: BioProject
SIO_000068: bioproject

SAMN33408179
type: BioSample
SIO_000068: biosample

1
title: An annotated chromosome-scale reference genome for Eastern black-eared wheatear (Oenanthe melanoleuca)
author: Peona, V.
author: Palacios-Gimenez, O.M.
author: Lutgen, D.
author: Olsen, R.A.
author: Alaei Kakhki, N.
author: Andriopoulos, P.
author: Bontzorlos, V.
author: Schweizer, M.
author: Suh, A.
author: Burri, R.
journal: G3 (Bethesda) (2023) In press
pubmed: 37097035
comments: Publication Status: Available-Online prior to print

37097035
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20597361:1
position: 20597361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-20597361:1:source
so part of: sequence
organism: Oenanthe melanoleuca
mol type: genomic DNA
isolate: GR-GAL-2019-014
chromosome: 12
sex: male
tissue type: blood
dev stage: adult
collected by: Reto Burri

2939378
type: Taxonomy
SIO_000068: taxonomy

LOC130258133
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: LOC130258133
note: uncharacterized LOC130258133; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1..1275
location: region:1-1275:1
so has part: feature:1-1275:1:exon
subclass of: SO_0000011

130258133
type: Gene
SIO_000068: ncbigene

position:1275:1
position: 1275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-1275:1:exon

LOC130258133
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2939378
nc RNA class: lncRNA
gene: LOC130258133
product: uncharacterized LOC130258133
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008841443.1
SIO_010081: LOC130258133
subclass of: SO_0000673
so part of: LOC130258133
location: join(1..66,818..1275)
location: region:1-1275:1
so has part: feature:1-66:1:exon
so has part: feature:818-1275:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1-66:1:exon

position:66:1
position: 66
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:818-1275:1:exon

position:818:1
position: 818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NR2C2
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: NR2C2
note: nuclear receptor subfamily 2 group C member 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6980..43399
location: region:6980-43399:1
so has part: feature:6980-43399:1:exon
subclass of: SO_0000010

130258134
type: Gene
SIO_000068: ncbigene

position:6980:1
position: 6980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43399:1
position: 43399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6980-43399:1:exon

NR2C2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: NR2C2
product: nuclear receptor subfamily 2 group C member 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
transcript id: XM_056501240.1
SIO_010081: NR2C2
subclass of: SO_0000673
so part of: NR2C2
location: join(6980..7578,10720..10803,18404..18514,19365..19565,20763..20865,21843..22022,23747..23893,25531..25624,26002..26135,28503..28680,28949..29070,29591..29730,32528..32665,34194..34299,36428..43399)
location: region:6980-43399:1
so has part: feature:6980-7578:1:exon
so has part: feature:10720-10803:1:exon
so has part: feature:18404-18514:1:exon
so has part: feature:19365-19565:1:exon
so has part: feature:20763-20865:1:exon
so has part: feature:21843-22022:1:exon
so has part: feature:23747-23893:1:exon
so has part: feature:25531-25624:1:exon
so has part: feature:26002-26135:1:exon
so has part: feature:28503-28680:1:exon
so has part: feature:28949-29070:1:exon
so has part: feature:29591-29730:1:exon
so has part: feature:32528-32665:1:exon
so has part: feature:34194-34299:1:exon
so has part: feature:36428-43399:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6980-7578:1:exon

position:7578:1
position: 7578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10720-10803:1:exon

position:10720:1
position: 10720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10803:1
position: 10803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:18404-18514:1:exon

position:18404:1
position: 18404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18514:1
position: 18514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:19365-19565:1:exon

position:19365:1
position: 19365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19565:1
position: 19565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:20763-20865:1:exon

position:20763:1
position: 20763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20865:1
position: 20865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:21843-22022:1:exon

position:21843:1
position: 21843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22022:1
position: 22022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:23747-23893:1:exon

position:23747:1
position: 23747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23893:1
position: 23893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:25531-25624:1:exon

position:25531:1
position: 25531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25624:1
position: 25624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:26002-26135:1:exon

position:26002:1
position: 26002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26135:1
position: 26135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:28503-28680:1:exon

position:28503:1
position: 28503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28680:1
position: 28680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:28949-29070:1:exon

position:28949:1
position: 28949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29070:1
position: 29070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:29591-29730:1:exon

position:29591:1
position: 29591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29730:1
position: 29730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:32528-32665:1:exon

position:32528:1
position: 32528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32665:1
position: 32665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:34194-34299:1:exon

position:34194:1
position: 34194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34299:1
position: 34299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:36428-43399:1:exon

position:36428:1
position: 36428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NR2C2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: NR2C2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: nuclear receptor subfamily 2 group C member 2
translation: MATNMEVLAQQVVETQQVAEVPTVQTPLSESPVMTSPSQRIQIISTDSSVASPQRIQIVTDQQTGQKIQIVTAVDSAVSPKQQFILASPDGTGAGKVILAAPETSNAKQLIFTTTDNIVPGRIQIVTDTASVERLLGKTDVQRPQVVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFCRLKKCLEMGMKMESVQSERKPFDVQREKPTNCAASTEKIYIRKDLRXPLIATPTFVADKDGTRSAGLLDPGMLVNIQQPLIRDDGTVLLAADSKAETSQGALGTLANVVTSLANLSESLNNGDTSEVQQEEQSASEITRAFDTLAKALSSTDGTTAHDLADGMDPTGGGNIHVISRDQSTPIIEVEGPLLTDTHVTFKLTMPSPMPEYLNVHYICESASRLLFLSMHWARSIPAFQALGQDCNTSLVRACWNELFTLGLAQCAQVMSLSTILGAIVNHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMAKLDIDGYEYAYLKAIVLFSPDHPGLTSSTQIEKFQEKAQMELQDYVQKTYPEDTYRLARILVRLPALRLMSSSITEELFFTGLIGNVPIDSIIPYILKMETAEYNGQITGTSA
SIO_010081: NR2C2
subclass of: SO_0000673
so part of: NR2C2
location: join(10744..10803,18404..18514,19365..19565,20763..20865,21843..22022,23747..23893,25531..25624,26002..26135,28503..28680,28949..29070,29591..29730,32528..32665,34194..34299,36428..36602)
location: region:10744-36602:1
so has part: feature:10744-10803:1:exon
so has part: feature:18404-18514:1:exon
so has part: feature:19365-19565:1:exon
so has part: feature:20763-20865:1:exon
so has part: feature:21843-22022:1:exon
so has part: feature:23747-23893:1:exon
so has part: feature:25531-25624:1:exon
so has part: feature:26002-26135:1:exon
so has part: feature:28503-28680:1:exon
so has part: feature:28949-29070:1:exon
so has part: feature:29591-29730:1:exon
so has part: feature:32528-32665:1:exon
so has part: feature:34194-34299:1:exon
so has part: feature:36428-36602:1:exon

XP_056357215.1
type: Protein
SIO_000068: ncbiprotein

position:10744:1
position: 10744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36602:1
position: 36602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10744-10803:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:18404-18514:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:19365-19565:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:20763-20865:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:21843-22022:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:23747-23893:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:25531-25624:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:26002-26135:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:28503-28680:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:28949-29070:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:29591-29730:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:32528-32665:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:34194-34299:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:36428-36602:1:exon

MRPS25
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: MRPS25
note: mitochondrial ribosomal protein S25; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 44846..46198
location: region:44846-46198:1
so has part: feature:44846-46198:1:exon
subclass of: SO_0000010

130258119
type: Gene
SIO_000068: ncbigene

position:44846:1
position: 44846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46198:1
position: 46198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44846-46198:1:exon

MRPS25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: MRPS25
product: mitochondrial ribosomal protein S25
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501213.1
SIO_010081: MRPS25
subclass of: SO_0000673
so part of: MRPS25
location: join(44846..45055,45174..45280,45557..45644,45881..46198)
location: region:44846-46198:1
so has part: feature:44846-45055:1:exon
so has part: feature:45174-45280:1:exon
so has part: feature:45557-45644:1:exon
so has part: feature:45881-46198:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:44846-45055:1:exon

position:45055:1
position: 45055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:45174-45280:1:exon

position:45174:1
position: 45174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45280:1
position: 45280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:45557-45644:1:exon

position:45557:1
position: 45557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45644:1
position: 45644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:45881-46198:1:exon

position:45881:1
position: 45881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MRPS25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: MRPS25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S25, mitochondrial
translation: MPMKGRFPVRRTLQYLSQGDVVFKTSVKVMTVNYNTAGDLSEGARKFVFFNIPQIQYKNPWVQIMLFRNMTPSPFLRFYLDNGEQVLVDVENKTNKEITEHVKKILGKSKEMLEKEERERKKLSHPATFGPKKYHLRECMCEIEGQVPCPAVVPLPKEMRGKYKAAMKNEA
SIO_010081: MRPS25
subclass of: SO_0000673
so part of: MRPS25
location: join(44922..45055,45174..45280,45557..45644,45881..46067)
location: region:44922-46067:1
so has part: feature:44922-45055:1:exon
so has part: feature:45174-45280:1:exon
so has part: feature:45557-45644:1:exon
so has part: feature:45881-46067:1:exon

XP_056357188.1
type: Protein
SIO_000068: ncbiprotein

position:44922:1
position: 44922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46067:1
position: 46067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44922-45055:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:45174-45280:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45557-45644:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45881-46067:1:exon

RBSN
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: RBSN
note: rabenosyn, RAB effector; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(46898..59733)
location: region:46898-59733:-1
so has part: feature:46898-59733:-1:exon
subclass of: SO_0000010

130258117
type: Gene
SIO_000068: ncbigene

position:46898:-1
position: 46898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59733:-1
position: 59733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46898-59733:-1:exon

RBSN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: RBSN
product: rabenosyn, RAB effector, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501206.1
SIO_010081: RBSN
subclass of: SO_0000673
so part of: RBSN
location: complement(join(46898..50295,51220..51294,51733..51835,52262..52348,53047..53117,53919..54160,55080..55241,55336..55381,55918..56018,57761..57901,59155..59383,59656..59733))
location: region:46898-59733:-1
so has part: feature:59656-59733:-1:exon
so has part: feature:59155-59383:-1:exon
so has part: feature:57761-57901:-1:exon
so has part: feature:55918-56018:-1:exon
so has part: feature:55336-55381:-1:exon
so has part: feature:55080-55241:-1:exon
so has part: feature:53919-54160:-1:exon
so has part: feature:53047-53117:-1:exon
so has part: feature:52262-52348:-1:exon
so has part: feature:51733-51835:-1:exon
so has part: feature:51220-51294:-1:exon
so has part: feature:46898-50295:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:59656-59733:-1:exon

position:59656:-1
position: 59656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:59155-59383:-1:exon

position:59155:-1
position: 59155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59383:-1
position: 59383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:57761-57901:-1:exon

position:57761:-1
position: 57761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57901:-1
position: 57901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:55918-56018:-1:exon

position:55918:-1
position: 55918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56018:-1
position: 56018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:55336-55381:-1:exon

position:55336:-1
position: 55336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55381:-1
position: 55381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:55080-55241:-1:exon

position:55080:-1
position: 55080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55241:-1
position: 55241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:53919-54160:-1:exon

position:53919:-1
position: 53919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54160:-1
position: 54160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:53047-53117:-1:exon

position:53047:-1
position: 53047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53117:-1
position: 53117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:52262-52348:-1:exon

position:52262:-1
position: 52262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52348:-1
position: 52348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:51733-51835:-1:exon

position:51733:-1
position: 51733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51835:-1
position: 51835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:51220-51294:-1:exon

position:51220:-1
position: 51220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51294:-1
position: 51294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:46898-50295:-1:exon

position:50295:-1
position: 50295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBSN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: RBSN
product: rabenosyn, RAB effector, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501205.1
SIO_010081: RBSN
subclass of: SO_0000673
so part of: RBSN
location: complement(join(46898..50295,51220..51294,51733..51835,52262..52348,53047..53117,53919..54160,55080..55241,55336..55381,55918..56018,57761..57901,59155..59519))
location: region:46898-59519:-1
so has part: feature:59155-59519:-1:exon
so has part: feature:57761-57901:-1:exon
so has part: feature:55918-56018:-1:exon
so has part: feature:55336-55381:-1:exon
so has part: feature:55080-55241:-1:exon
so has part: feature:53919-54160:-1:exon
so has part: feature:53047-53117:-1:exon
so has part: feature:52262-52348:-1:exon
so has part: feature:51733-51835:-1:exon
so has part: feature:51220-51294:-1:exon
so has part: feature:46898-50295:-1:exon

position:59519:-1
position: 59519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59155-59519:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:57761-57901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:55918-56018:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:55336-55381:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:55080-55241:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:53919-54160:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:53047-53117:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:52262-52348:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:51733-51835:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:51220-51294:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:46898-50295:-1:exon

RBSN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: RBSN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rabenosyn-5
translation: MASGCPAAFGDPSEVREGFLCPLCLKDLQAFRQLQAHYEEQHSGEDRDVRAQLRNLVQKAKRAKKKLLKQEDDRTDSGSQERYESFSYGGVDPYMWEPQEVGAMRSHLCEFKKHRAARIDHYVVEVNKLIIRLEKLTSFDRANTESAKIRAIEKSVVPWVSDQDVPFCPDCGSKFSIRNRRHHCRLCGSIMCKKCMEFVSLPLASKLTSASKEALGSHVSPSSSPSSVHGSRRGSISSISSVSSVLDEKDDERIRCCQHCKDTLLKREQQIDEKEYTPEIVKLYEKLRLCMEKVDQKAPEYIRMAESLNAGETAYNLDHANDLRVEIQKMYEFIDALSKKILSLGLHEDTQPHPKILQLQRMIRYSATLFVQEKLLGLMSLPTKDQYEELKKRRLHMVALETQGKQEEKQKEFISVSASAVNGDETQIKKGTVRKSEGWLPTSSISRESERADPLLQQIDNITSFIKQAKAANRIDEVHMLQENLMQLQDEYDQQQTLKAIELSKKQAEEEEIQREELQVLREKEREREHHKFMSQHSRTHSLDFREVKQHLDVTWIKGDTSFETPAVEQLPAKEHLTFTLKPQSVPQCDEERDQPACLNPFEDEADTPQVEEDPSNPFAKDTSPMVSFSNTSQQSDKKEYNPFESEEEDEQSNGAPGCASNPFEEDENPFEKPGGSWNSGNPFEEGSSINPFEVEDGSEISGEEAIEEELLLQQIDNIKAYIFDAKHSGRLDEVEVLTENLKELKHTLAKQKEKSNC
SIO_010081: RBSN
subclass of: SO_0000673
so part of: RBSN
location: complement(join(49210..50295,51220..51294,51733..51835,52262..52348,53047..53117,53919..54160,55080..55241,55336..55381,55918..56018,57761..57901,59155..59317))
location: region:49210-59317:-1
so has part: feature:59155-59317:-1:exon
so has part: feature:57761-57901:-1:exon
so has part: feature:55918-56018:-1:exon
so has part: feature:55336-55381:-1:exon
so has part: feature:55080-55241:-1:exon
so has part: feature:53919-54160:-1:exon
so has part: feature:53047-53117:-1:exon
so has part: feature:52262-52348:-1:exon
so has part: feature:51733-51835:-1:exon
so has part: feature:51220-51294:-1:exon
so has part: feature:49210-50295:-1:exon

XP_056357180.1
type: Protein
SIO_000068: ncbiprotein

position:49210:-1
position: 49210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59317:-1
position: 59317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59155-59317:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:57761-57901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:55918-56018:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:55336-55381:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:55080-55241:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:53919-54160:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:53047-53117:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:52262-52348:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:51733-51835:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:51220-51294:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:49210-50295:-1:exon

RBSN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: RBSN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rabenosyn-5
translation: MASGCPAAFGDPSEVREGFLCPLCLKDLQAFRQLQAHYEEQHSGEDRDVRAQLRNLVQKAKRAKKKLLKQEDDRTDSGSQERYESFSYGGVDPYMWEPQEVGAMRSHLCEFKKHRAARIDHYVVEVNKLIIRLEKLTSFDRANTESAKIRAIEKSVVPWVSDQDVPFCPDCGSKFSIRNRRHHCRLCGSIMCKKCMEFVSLPLASKLTSASKEALGSHVSPSSSPSSVHGSRRGSISSISSVSSVLDEKDDERIRCCQHCKDTLLKREQQIDEKEYTPEIVKLYEKLRLCMEKVDQKAPEYIRMAESLNAGETAYNLDHANDLRVEIQKMYEFIDALSKKILSLGLHEDTQPHPKILQLQRMIRYSATLFVQEKLLGLMSLPTKDQYEELKKRRLHMVALETQGKQEEKQKEFISVSASAVNGDETQIKKGTVRKSEGWLPTSSISRESERADPLLQQIDNITSFIKQAKAANRIDEVHMLQENLMQLQDEYDQQQTLKAIELSKKQAEEEEIQREELQVLREKEREREHHKFMSQHSRTHSLDFREVKQHLDVTWIKGDTSFETPAVEQLPAKEHLTFTLKPQSVPQCDEERDQPACLNPFEDEADTPQVEEDPSNPFAKDTSPMVSFSNTSQQSDKKEYNPFESEEEDEQSNGAPGCASNPFEEDENPFEKPGGSWNSGNPFEEGSSINPFEVEDGSEISGEEAIEEELLLQQIDNIKAYIFDAKHSGRLDEVEVLTENLKELKHTLAKQKEKSNC
SIO_010081: RBSN
subclass of: SO_0000673
so part of: RBSN
location: complement(join(49210..50295,51220..51294,51733..51835,52262..52348,53047..53117,53919..54160,55080..55241,55336..55381,55918..56018,57761..57901,59155..59317))
location: region:49210-59317:-1
so has part: feature:59155-59317:-1:exon
so has part: feature:57761-57901:-1:exon
so has part: feature:55918-56018:-1:exon
so has part: feature:55336-55381:-1:exon
so has part: feature:55080-55241:-1:exon
so has part: feature:53919-54160:-1:exon
so has part: feature:53047-53117:-1:exon
so has part: feature:52262-52348:-1:exon
so has part: feature:51733-51835:-1:exon
so has part: feature:51220-51294:-1:exon
so has part: feature:49210-50295:-1:exon

XP_056357181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59155-59317:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:57761-57901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:55918-56018:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:55336-55381:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:55080-55241:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:53919-54160:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:53047-53117:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:52262-52348:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:51733-51835:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:51220-51294:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:49210-50295:-1:exon

TRH
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: TRH
note: thyrotropin releasing hormone; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(66088..86372)
location: region:66088-86372:-1
so has part: feature:66088-86372:-1:exon
subclass of: SO_0000010

130258118
type: Gene
SIO_000068: ncbigene

position:66088:-1
position: 66088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86372:-1
position: 86372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66088-86372:-1:exon

TRH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: TRH
product: thyrotropin releasing hormone, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 8 Proteins
transcript id: XM_056501212.1
SIO_010081: TRH
subclass of: SO_0000673
so part of: TRH
location: complement(join(66088..68512,69358..69575,71574..71746,72582..72748,85815..86372))
location: region:66088-86372:-1
so has part: feature:85815-86372:-1:exon
so has part: feature:72582-72748:-1:exon
so has part: feature:71574-71746:-1:exon
so has part: feature:69358-69575:-1:exon
so has part: feature:66088-68512:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:85815-86372:-1:exon

position:85815:-1
position: 85815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:72582-72748:-1:exon

position:72582:-1
position: 72582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72748:-1
position: 72748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:71574-71746:-1:exon

position:71574:-1
position: 71574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71746:-1
position: 71746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:69358-69575:-1:exon

position:69358:-1
position: 69358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69575:-1
position: 69575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:66088-68512:-1:exon

position:68512:-1
position: 68512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: TRH
product: thyrotropin releasing hormone, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 8 Proteins
transcript id: XM_056501210.1
SIO_010081: TRH
subclass of: SO_0000673
so part of: TRH
location: complement(join(66088..68512,69358..69575,70474..70526,71574..71746,72582..72748,85815..86372))
location: region:66088-86372:-1
so has part: feature:85815-86372:-1:exon
so has part: feature:72582-72748:-1:exon
so has part: feature:71574-71746:-1:exon
so has part: feature:70474-70526:-1:exon
so has part: feature:69358-69575:-1:exon
so has part: feature:66088-68512:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:85815-86372:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:72582-72748:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:71574-71746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:70474-70526:-1:exon

position:70474:-1
position: 70474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70526:-1
position: 70526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:69358-69575:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:66088-68512:-1:exon

TRH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: TRH
product: thyrotropin releasing hormone, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 8 Proteins
transcript id: XM_056501211.1
SIO_010081: TRH
subclass of: SO_0000673
so part of: TRH
location: complement(join(66088..68512,69358..69575,70474..71746,72582..72748,85815..86372))
location: region:66088-86372:-1
so has part: feature:85815-86372:-1:exon
so has part: feature:72582-72748:-1:exon
so has part: feature:70474-71746:-1:exon
so has part: feature:69358-69575:-1:exon
so has part: feature:66088-68512:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:85815-86372:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:72582-72748:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:70474-71746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69358-69575:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:66088-68512:-1:exon

TRH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: TRH
product: thyrotropin releasing hormone, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 8 Proteins
transcript id: XM_056501208.1
SIO_010081: TRH
subclass of: SO_0000673
so part of: TRH
location: complement(join(66093..68512,69358..70526,71574..71746,72582..72748,85815..86372))
location: region:66093-86372:-1
so has part: feature:85815-86372:-1:exon
so has part: feature:72582-72748:-1:exon
so has part: feature:71574-71746:-1:exon
so has part: feature:69358-70526:-1:exon
so has part: feature:66093-68512:-1:exon

position:66093:-1
position: 66093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85815-86372:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:72582-72748:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:71574-71746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69358-70526:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:66093-68512:-1:exon

TRH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: TRH
product: thyrotropin releasing hormone, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 8 Proteins
transcript id: XM_056501209.1
SIO_010081: TRH
subclass of: SO_0000673
so part of: TRH
location: complement(join(66093..68512,69358..71746,72582..72748,85815..86372))
location: region:66093-86372:-1
so has part: feature:85815-86372:-1:exon
so has part: feature:72582-72748:-1:exon
so has part: feature:69358-71746:-1:exon
so has part: feature:66093-68512:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:85815-86372:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:72582-72748:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:69358-71746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:66093-68512:-1:exon

TRH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: TRH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thyrotropin releasing hormone isoform X1
translation: MLITQRRKDPKRLQSLQKFFQCFSVSGNTAVIARFACSILLPCCSLSNGSCRNLCPTMPSTQLPLLLLCLTLCGVCFNGGHLLPEKSKNMGKSPLDDILQRSESFILQSVLKKAEKEEEINKEPNAPLPQWFSKRQHPGKKYLSNLEKRQHPGKRDVEEETSYGDIQKRQHPGKREMEDDPDVYLELKRQQPPRRKPLLDQFANSPRAQPTYTNKLSKREHPGRRYPIYKHQRPSKRGWNYEVDLYSEKLQHPGKRHWNSGSSGDTGPCNFQESFTCHKGSLLLDLVEDVSRDRVEEKRQHPGKRSAWESETEE
SIO_010081: TRH
subclass of: SO_0000673
so part of: TRH
location: complement(join(67935..68512,69358..69724))
location: region:67935-69724:-1
so has part: feature:69358-69724:-1:exon
so has part: feature:67935-68512:-1:exon

XP_056357183.1
type: Protein
SIO_000068: ncbiprotein

position:67935:-1
position: 67935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69724:-1
position: 69724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69358-69724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:67935-68512:-1:exon

TRH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: TRH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thyrotropin releasing hormone isoform X1
translation: MLITQRRKDPKRLQSLQKFFQCFSVSGNTAVIARFACSILLPCCSLSNGSCRNLCPTMPSTQLPLLLLCLTLCGVCFNGGHLLPEKSKNMGKSPLDDILQRSESFILQSVLKKAEKEEEINKEPNAPLPQWFSKRQHPGKKYLSNLEKRQHPGKRDVEEETSYGDIQKRQHPGKREMEDDPDVYLELKRQQPPRRKPLLDQFANSPRAQPTYTNKLSKREHPGRRYPIYKHQRPSKRGWNYEVDLYSEKLQHPGKRHWNSGSSGDTGPCNFQESFTCHKGSLLLDLVEDVSRDRVEEKRQHPGKRSAWESETEE
SIO_010081: TRH
subclass of: SO_0000673
so part of: TRH
location: complement(join(67935..68512,69358..69724))
location: region:67935-69724:-1
so has part: feature:69358-69724:-1:exon
so has part: feature:67935-68512:-1:exon

XP_056357184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69358-69724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:67935-68512:-1:exon

TRH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: TRH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thyrotropin releasing hormone isoform X2
translation: MPSTQLPLLLLCLTLCGVCFNGGHLLPEKSKNMGKSPLDDILQRSESFILQSVLKKAEKEEEINKEPNAPLPQWFSKRQHPGKKYLSNLEKRQHPGKRDVEEETSYGDIQKRQHPGKREMEDDPDVYLELKRQQPPRRKPLLDQFANSPRAQPTYTNKLSKREHPGRRYPIYKHQRPSKRGWNYEVDLYSEKLQHPGKRHWNSGSSGDTGPCNFQESFTCHKGSLLLDLVEDVSRDRVEEKRQHPGKRSAWESETEE
SIO_010081: TRH
subclass of: SO_0000673
so part of: TRH
location: complement(join(67935..68512,69358..69553))
location: region:67935-69553:-1
so has part: feature:69358-69553:-1:exon
so has part: feature:67935-68512:-1:exon

XP_056357185.1
type: Protein
SIO_000068: ncbiprotein

position:69553:-1
position: 69553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69358-69553:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:67935-68512:-1:exon

TRH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: TRH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thyrotropin releasing hormone isoform X2
translation: MPSTQLPLLLLCLTLCGVCFNGGHLLPEKSKNMGKSPLDDILQRSESFILQSVLKKAEKEEEINKEPNAPLPQWFSKRQHPGKKYLSNLEKRQHPGKRDVEEETSYGDIQKRQHPGKREMEDDPDVYLELKRQQPPRRKPLLDQFANSPRAQPTYTNKLSKREHPGRRYPIYKHQRPSKRGWNYEVDLYSEKLQHPGKRHWNSGSSGDTGPCNFQESFTCHKGSLLLDLVEDVSRDRVEEKRQHPGKRSAWESETEE
SIO_010081: TRH
subclass of: SO_0000673
so part of: TRH
location: complement(join(67935..68512,69358..69553))
location: region:67935-69553:-1
so has part: feature:69358-69553:-1:exon
so has part: feature:67935-68512:-1:exon

XP_056357186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69358-69553:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:67935-68512:-1:exon

TRH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: TRH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thyrotropin releasing hormone isoform X2
translation: MPSTQLPLLLLCLTLCGVCFNGGHLLPEKSKNMGKSPLDDILQRSESFILQSVLKKAEKEEEINKEPNAPLPQWFSKRQHPGKKYLSNLEKRQHPGKRDVEEETSYGDIQKRQHPGKREMEDDPDVYLELKRQQPPRRKPLLDQFANSPRAQPTYTNKLSKREHPGRRYPIYKHQRPSKRGWNYEVDLYSEKLQHPGKRHWNSGSSGDTGPCNFQESFTCHKGSLLLDLVEDVSRDRVEEKRQHPGKRSAWESETEE
SIO_010081: TRH
subclass of: SO_0000673
so part of: TRH
location: complement(join(67935..68512,69358..69553))
location: region:67935-69553:-1
so has part: feature:69358-69553:-1:exon
so has part: feature:67935-68512:-1:exon

XP_056357187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69358-69553:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:67935-68512:-1:exon

TRH
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 2939378
gene: TRH
product: thyrotropin releasing hormone, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008841438.1
SIO_010081: TRH
so part of: TRH
location: complement(join(75972..78192,85815..86349))
location: region:75972-86349:-1
so has part: feature:85815-86349:-1:exon
so has part: feature:75972-78192:-1:exon

position:75972:-1
position: 75972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86349:-1
position: 86349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85815-86349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:75972-78192:-1:exon

position:78192:-1
position: 78192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMCC1
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: TMCC1
note: transmembrane and coiled-coil domain family 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 86465..145243
location: region:86465-145243:1
so has part: feature:86465-145243:1:exon
subclass of: SO_0000010

130258233
type: Gene
SIO_000068: ncbigene

position:86465:1
position: 86465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145243:1
position: 145243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86465-145243:1:exon

TMCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: TMCC1
product: transmembrane and coiled-coil domain family 1, transcript variant X8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501423.1
SIO_010081: TMCC1
subclass of: SO_0000673
so part of: TMCC1
location: join(86465..86531,90009..90255,96178..96234,135027..135961,142200..142335,144629..145243)
location: region:86465-145243:1
so has part: feature:86465-86531:1:exon
so has part: feature:90009-90255:1:exon
so has part: feature:96178-96234:1:exon
so has part: feature:135027-135961:1:exon
so has part: feature:142200-142335:1:exon
so has part: feature:144629-145243:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:86465-86531:1:exon

position:86531:1
position: 86531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:90009-90255:1:exon

position:90009:1
position: 90009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90255:1
position: 90255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:96178-96234:1:exon

position:96178:1
position: 96178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96234:1
position: 96234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:135027-135961:1:exon

position:135027:1
position: 135027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135961:1
position: 135961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:142200-142335:1:exon

position:142200:1
position: 142200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142335:1
position: 142335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:144629-145243:1:exon

position:144629:1
position: 144629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: TMCC1
product: transmembrane and coiled-coil domain family 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501418.1
SIO_010081: TMCC1
subclass of: SO_0000673
so part of: TMCC1
location: join(86466..86531,90009..90255,96178..96234,99321..99565,135027..135961,142200..142335,144629..145243)
location: region:86466-145243:1
so has part: feature:86466-86531:1:exon
so has part: feature:90009-90255:1:exon
so has part: feature:96178-96234:1:exon
so has part: feature:99321-99565:1:exon
so has part: feature:135027-135961:1:exon
so has part: feature:142200-142335:1:exon
so has part: feature:144629-145243:1:exon

position:86466:1
position: 86466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86466-86531:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90009-90255:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:96178-96234:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99321-99565:1:exon

position:99321:1
position: 99321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99565:1
position: 99565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:135027-135961:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:142200-142335:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:144629-145243:1:exon

TMCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: TMCC1
product: transmembrane and coiled-coil domain family 1, transcript variant X9
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501425.1
SIO_010081: TMCC1
subclass of: SO_0000673
so part of: TMCC1
location: join(86473..86531,96178..96234,135027..135961,142200..142335,144629..145243)
location: region:86473-145243:1
so has part: feature:86473-86531:1:exon
so has part: feature:96178-96234:1:exon
so has part: feature:135027-135961:1:exon
so has part: feature:142200-142335:1:exon
so has part: feature:144629-145243:1:exon

position:86473:1
position: 86473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86473-86531:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:96178-96234:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:135027-135961:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:142200-142335:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:144629-145243:1:exon

TMCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: TMCC1
product: transmembrane and coiled-coil domain family 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501419.1
SIO_010081: TMCC1
subclass of: SO_0000673
so part of: TMCC1
location: join(86487..86531,96178..96234,99321..99565,135027..135961,142200..142335,144629..145243)
location: region:86487-145243:1
so has part: feature:86487-86531:1:exon
so has part: feature:96178-96234:1:exon
so has part: feature:99321-99565:1:exon
so has part: feature:135027-135961:1:exon
so has part: feature:142200-142335:1:exon
so has part: feature:144629-145243:1:exon

position:86487:1
position: 86487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86487-86531:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:96178-96234:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99321-99565:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:135027-135961:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:142200-142335:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:144629-145243:1:exon

TMCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: TMCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and coiled-coil domains protein 1 isoform X7
translation: MMEIERLEVSSLAQTSSAVASSTDGSINADSVDGTPDPQRTKVAITHLQQKILKLTEQIKIEQTARDDNVAEYLKLANNADKQQSARIKQVFEKKNQKSAQTILQLQKKLEHYHRKLREIEQNGIPRQPKDVFRDMHQGLKDVGAKVTGFSEGVVDSVKGGLSSFSQATHSAAGAVVSKPREIASLIRNKFGSADNIANLKDSLEEGQEDGTGGKALGVIQNFQSSPKYGSEEDCSSATSGSVGANSTTGGPVGASSSKTNTLDMQSSGFDAILHEIQEIRETQARLEESFEDLKVRYQRDYTLIMQTLQEERYRCERLEEQLNDLTELHQNEILNLKQELASMEEKIAYQSYERARDIQEALEACQTRISKMELQQQQQQVVQLEGLENATARNLLGKFINILLAVMAVLLVFVSTVANCVVPLMKTRNRTFSTLLIVVFIAFLWKHWDAITGYLERFLSPPR
SIO_010081: TMCC1
subclass of: SO_0000673
so part of: TMCC1
location: join(96226..96234,135027..135961,142200..142335,144629..144943)
location: region:96226-144943:1
so has part: feature:96226-96234:1:exon
so has part: feature:135027-135961:1:exon
so has part: feature:142200-142335:1:exon
so has part: feature:144629-144943:1:exon

XP_056357398.1
type: Protein
SIO_000068: ncbiprotein

position:96226:1
position: 96226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144943:1
position: 144943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96226-96234:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:135027-135961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142200-142335:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144629-144943:1:exon

TMCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: TMCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and coiled-coil domains protein 1 isoform X7
translation: MMEIERLEVSSLAQTSSAVASSTDGSINADSVDGTPDPQRTKVAITHLQQKILKLTEQIKIEQTARDDNVAEYLKLANNADKQQSARIKQVFEKKNQKSAQTILQLQKKLEHYHRKLREIEQNGIPRQPKDVFRDMHQGLKDVGAKVTGFSEGVVDSVKGGLSSFSQATHSAAGAVVSKPREIASLIRNKFGSADNIANLKDSLEEGQEDGTGGKALGVIQNFQSSPKYGSEEDCSSATSGSVGANSTTGGPVGASSSKTNTLDMQSSGFDAILHEIQEIRETQARLEESFEDLKVRYQRDYTLIMQTLQEERYRCERLEEQLNDLTELHQNEILNLKQELASMEEKIAYQSYERARDIQEALEACQTRISKMELQQQQQQVVQLEGLENATARNLLGKFINILLAVMAVLLVFVSTVANCVVPLMKTRNRTFSTLLIVVFIAFLWKHWDAITGYLERFLSPPR
SIO_010081: TMCC1
subclass of: SO_0000673
so part of: TMCC1
location: join(96226..96234,135027..135961,142200..142335,144629..144943)
location: region:96226-144943:1
so has part: feature:96226-96234:1:exon
so has part: feature:135027-135961:1:exon
so has part: feature:142200-142335:1:exon
so has part: feature:144629-144943:1:exon

XP_056357400.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96226-96234:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:135027-135961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142200-142335:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144629-144943:1:exon

TMCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: TMCC1
product: transmembrane and coiled-coil domain family 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501416.1
SIO_010081: TMCC1
subclass of: SO_0000673
so part of: TMCC1
location: join(98857..99565,135027..135961,142200..142335,144629..145243)
location: region:98857-145243:1
so has part: feature:98857-99565:1:exon
so has part: feature:135027-135961:1:exon
so has part: feature:142200-142335:1:exon
so has part: feature:144629-145243:1:exon

position:98857:1
position: 98857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98857-99565:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:135027-135961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142200-142335:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144629-145243:1:exon

TMCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: TMCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and coiled-coil domains protein 1 isoform X1
translation: MEPSGTEQLSDDPDPGGKSQDQETKKQHESEQKLSKITHNALENINVIGQGLKHLFQHQRRRSSVSPHDIQQAQAELEPDLDLESQSVCAEIDGVSTHPTALNRVLQQIRVPPKMKRGTSLHSRWGKGDAPKGSPQINRRSAQDIQSGRPRSSSTTDAPTNLSVMEIASSIYVGGEEATAAAIERLEVSSLAQTSSAVASSTDGSINADSVDGTPDPQRTKVAITHLQQKILKLTEQIKIEQTARDDNVAEYLKLANNADKQQSARIKQVFEKKNQKSAQTILQLQKKLEHYHRKLREIEQNGIPRQPKDVFRDMHQGLKDVGAKVTGFSEGVVDSVKGGLSSFSQATHSAAGAVVSKPREIASLIRNKFGSADNIANLKDSLEEGQEDGTGGKALGVIQNFQSSPKYGSEEDCSSATSGSVGANSTTGGPVGASSSKTNTLDMQSSGFDAILHEIQEIRETQARLEESFEDLKVRYQRDYTLIMQTLQEERYRCERLEEQLNDLTELHQNEILNLKQELASMEEKIAYQSYERARDIQEALEACQTRISKMELQQQQQQVVQLEGLENATARNLLGKFINILLAVMAVLLVFVSTVANCVVPLMKTRNRTFSTLLIVVFIAFLWKHWDAITGYLERFLSPPR
SIO_010081: TMCC1
subclass of: SO_0000673
so part of: TMCC1
location: join(99020..99565,135027..135961,142200..142335,144629..144943)
location: region:99020-144943:1
so has part: feature:99020-99565:1:exon
so has part: feature:135027-135961:1:exon
so has part: feature:142200-142335:1:exon
so has part: feature:144629-144943:1:exon

XP_056357391.1
type: Protein
SIO_000068: ncbiprotein

position:99020:1
position: 99020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99020-99565:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:135027-135961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142200-142335:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144629-144943:1:exon

TMCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: TMCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and coiled-coil domains protein 1 isoform X3
translation: MKRGTSLHSRWGKGDAPKGSPQINRRSAQDIQSGRPRSSSTTDAPTNLSVMEIASSIYVGGEEATAAAIERLEVSSLAQTSSAVASSTDGSINADSVDGTPDPQRTKVAITHLQQKILKLTEQIKIEQTARDDNVAEYLKLANNADKQQSARIKQVFEKKNQKSAQTILQLQKKLEHYHRKLREIEQNGIPRQPKDVFRDMHQGLKDVGAKVTGFSEGVVDSVKGGLSSFSQATHSAAGAVVSKPREIASLIRNKFGSADNIANLKDSLEEGQEDGTGGKALGVIQNFQSSPKYGSEEDCSSATSGSVGANSTTGGPVGASSSKTNTLDMQSSGFDAILHEIQEIRETQARLEESFEDLKVRYQRDYTLIMQTLQEERYRCERLEEQLNDLTELHQNEILNLKQELASMEEKIAYQSYERARDIQEALEACQTRISKMELQQQQQQVVQLEGLENATARNLLGKFINILLAVMAVLLVFVSTVANCVVPLMKTRNRTFSTLLIVVFIAFLWKHWDAITGYLERFLSPPR
SIO_010081: TMCC1
subclass of: SO_0000673
so part of: TMCC1
location: join(99362..99565,135027..135961,142200..142335,144629..144943)
location: region:99362-144943:1
so has part: feature:99362-99565:1:exon
so has part: feature:135027-135961:1:exon
so has part: feature:142200-142335:1:exon
so has part: feature:144629-144943:1:exon

XP_056357393.1
type: Protein
SIO_000068: ncbiprotein

position:99362:1
position: 99362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99362-99565:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:135027-135961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142200-142335:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144629-144943:1:exon

TMCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: TMCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and coiled-coil domains protein 1 isoform X3
translation: MKRGTSLHSRWGKGDAPKGSPQINRRSAQDIQSGRPRSSSTTDAPTNLSVMEIASSIYVGGEEATAAAIERLEVSSLAQTSSAVASSTDGSINADSVDGTPDPQRTKVAITHLQQKILKLTEQIKIEQTARDDNVAEYLKLANNADKQQSARIKQVFEKKNQKSAQTILQLQKKLEHYHRKLREIEQNGIPRQPKDVFRDMHQGLKDVGAKVTGFSEGVVDSVKGGLSSFSQATHSAAGAVVSKPREIASLIRNKFGSADNIANLKDSLEEGQEDGTGGKALGVIQNFQSSPKYGSEEDCSSATSGSVGANSTTGGPVGASSSKTNTLDMQSSGFDAILHEIQEIRETQARLEESFEDLKVRYQRDYTLIMQTLQEERYRCERLEEQLNDLTELHQNEILNLKQELASMEEKIAYQSYERARDIQEALEACQTRISKMELQQQQQQVVQLEGLENATARNLLGKFINILLAVMAVLLVFVSTVANCVVPLMKTRNRTFSTLLIVVFIAFLWKHWDAITGYLERFLSPPR
SIO_010081: TMCC1
subclass of: SO_0000673
so part of: TMCC1
location: join(99362..99565,135027..135961,142200..142335,144629..144943)
location: region:99362-144943:1
so has part: feature:99362-99565:1:exon
so has part: feature:135027-135961:1:exon
so has part: feature:142200-142335:1:exon
so has part: feature:144629-144943:1:exon

XP_056357394.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99362-99565:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:135027-135961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142200-142335:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144629-144943:1:exon

TMCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: TMCC1
product: transmembrane and coiled-coil domain family 1, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501421.1
SIO_010081: TMCC1
subclass of: SO_0000673
so part of: TMCC1
location: join(110919..111066,135027..135961,142200..142335,144629..145243)
location: region:110919-145243:1
so has part: feature:110919-111066:1:exon
so has part: feature:135027-135961:1:exon
so has part: feature:142200-142335:1:exon
so has part: feature:144629-145243:1:exon

position:110919:1
position: 110919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110919-111066:1:exon

position:111066:1
position: 111066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:135027-135961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142200-142335:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144629-145243:1:exon

TMCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: TMCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and coiled-coil domains protein 1 isoform X5
translation: MVQRFSLRRQLSKIERLEVSSLAQTSSAVASSTDGSINADSVDGTPDPQRTKVAITHLQQKILKLTEQIKIEQTARDDNVAEYLKLANNADKQQSARIKQVFEKKNQKSAQTILQLQKKLEHYHRKLREIEQNGIPRQPKDVFRDMHQGLKDVGAKVTGFSEGVVDSVKGGLSSFSQATHSAAGAVVSKPREIASLIRNKFGSADNIANLKDSLEEGQEDGTGGKALGVIQNFQSSPKYGSEEDCSSATSGSVGANSTTGGPVGASSSKTNTLDMQSSGFDAILHEIQEIRETQARLEESFEDLKVRYQRDYTLIMQTLQEERYRCERLEEQLNDLTELHQNEILNLKQELASMEEKIAYQSYERARDIQEALEACQTRISKMELQQQQQQVVQLEGLENATARNLLGKFINILLAVMAVLLVFVSTVANCVVPLMKTRNRTFSTLLIVVFIAFLWKHWDAITGYLERFLSPPR
SIO_010081: TMCC1
subclass of: SO_0000673
so part of: TMCC1
location: join(111028..111066,135027..135961,142200..142335,144629..144943)
location: region:111028-144943:1
so has part: feature:111028-111066:1:exon
so has part: feature:135027-135961:1:exon
so has part: feature:142200-142335:1:exon
so has part: feature:144629-144943:1:exon

XP_056357396.1
type: Protein
SIO_000068: ncbiprotein

position:111028:1
position: 111028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111028-111066:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:135027-135961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142200-142335:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144629-144943:1:exon

TMCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: TMCC1
product: transmembrane and coiled-coil domain family 1, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501422.1
SIO_010081: TMCC1
subclass of: SO_0000673
so part of: TMCC1
location: join(123459..123494,135027..135961,142200..142335,144629..145243)
location: region:123459-145243:1
so has part: feature:123459-123494:1:exon
so has part: feature:135027-135961:1:exon
so has part: feature:142200-142335:1:exon
so has part: feature:144629-145243:1:exon

position:123459:1
position: 123459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123459-123494:1:exon

position:123494:1
position: 123494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:135027-135961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142200-142335:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144629-145243:1:exon

TMCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: TMCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and coiled-coil domains protein 1 isoform X6
translation: MVVKFSLIERLEVSSLAQTSSAVASSTDGSINADSVDGTPDPQRTKVAITHLQQKILKLTEQIKIEQTARDDNVAEYLKLANNADKQQSARIKQVFEKKNQKSAQTILQLQKKLEHYHRKLREIEQNGIPRQPKDVFRDMHQGLKDVGAKVTGFSEGVVDSVKGGLSSFSQATHSAAGAVVSKPREIASLIRNKFGSADNIANLKDSLEEGQEDGTGGKALGVIQNFQSSPKYGSEEDCSSATSGSVGANSTTGGPVGASSSKTNTLDMQSSGFDAILHEIQEIRETQARLEESFEDLKVRYQRDYTLIMQTLQEERYRCERLEEQLNDLTELHQNEILNLKQELASMEEKIAYQSYERARDIQEALEACQTRISKMELQQQQQQVVQLEGLENATARNLLGKFINILLAVMAVLLVFVSTVANCVVPLMKTRNRTFSTLLIVVFIAFLWKHWDAITGYLERFLSPPR
SIO_010081: TMCC1
subclass of: SO_0000673
so part of: TMCC1
location: join(123474..123494,135027..135961,142200..142335,144629..144943)
location: region:123474-144943:1
so has part: feature:123474-123494:1:exon
so has part: feature:135027-135961:1:exon
so has part: feature:142200-142335:1:exon
so has part: feature:144629-144943:1:exon

XP_056357397.1
type: Protein
SIO_000068: ncbiprotein

position:123474:1
position: 123474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123474-123494:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:135027-135961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142200-142335:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144629-144943:1:exon

TMCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: TMCC1
product: transmembrane and coiled-coil domain family 1, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501420.1
SIO_010081: TMCC1
subclass of: SO_0000673
so part of: TMCC1
location: join(126229..126783,135027..135961,142200..142335,144629..145243)
location: region:126229-145243:1
so has part: feature:126229-126783:1:exon
so has part: feature:135027-135961:1:exon
so has part: feature:142200-142335:1:exon
so has part: feature:144629-145243:1:exon

position:126229:1
position: 126229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126229-126783:1:exon

position:126783:1
position: 126783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:135027-135961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142200-142335:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144629-145243:1:exon

TMCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: TMCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and coiled-coil domains protein 1 isoform X4
translation: MFMWCCCTCVCCERDFCEPTKIERLEVSSLAQTSSAVASSTDGSINADSVDGTPDPQRTKVAITHLQQKILKLTEQIKIEQTARDDNVAEYLKLANNADKQQSARIKQVFEKKNQKSAQTILQLQKKLEHYHRKLREIEQNGIPRQPKDVFRDMHQGLKDVGAKVTGFSEGVVDSVKGGLSSFSQATHSAAGAVVSKPREIASLIRNKFGSADNIANLKDSLEEGQEDGTGGKALGVIQNFQSSPKYGSEEDCSSATSGSVGANSTTGGPVGASSSKTNTLDMQSSGFDAILHEIQEIRETQARLEESFEDLKVRYQRDYTLIMQTLQEERYRCERLEEQLNDLTELHQNEILNLKQELASMEEKIAYQSYERARDIQEALEACQTRISKMELQQQQQQVVQLEGLENATARNLLGKFINILLAVMAVLLVFVSTVANCVVPLMKTRNRTFSTLLIVVFIAFLWKHWDAITGYLERFLSPPR
SIO_010081: TMCC1
subclass of: SO_0000673
so part of: TMCC1
location: join(126721..126783,135027..135961,142200..142335,144629..144943)
location: region:126721-144943:1
so has part: feature:126721-126783:1:exon
so has part: feature:135027-135961:1:exon
so has part: feature:142200-142335:1:exon
so has part: feature:144629-144943:1:exon

XP_056357395.1
type: Protein
SIO_000068: ncbiprotein

position:126721:1
position: 126721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126721-126783:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:135027-135961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142200-142335:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144629-144943:1:exon

TMCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: TMCC1
product: transmembrane and coiled-coil domain family 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501417.1
SIO_010081: TMCC1
subclass of: SO_0000673
so part of: TMCC1
location: join(133165..134195,135027..135961,142200..142335,144629..145243)
location: region:133165-145243:1
so has part: feature:133165-134195:1:exon
so has part: feature:135027-135961:1:exon
so has part: feature:142200-142335:1:exon
so has part: feature:144629-145243:1:exon

position:133165:1
position: 133165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133165-134195:1:exon

position:134195:1
position: 134195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:135027-135961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142200-142335:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144629-145243:1:exon

TMCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: TMCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and coiled-coil domains protein 1 isoform X2
translation: MVLRPGSVCGSQLAAVAALGGRGVPRPLRWVSRELGNGGARPGEASPPRGGGWGRAGPRTESGRRAAGAMHGERALLPRRDKIERLEVSSLAQTSSAVASSTDGSINADSVDGTPDPQRTKVAITHLQQKILKLTEQIKIEQTARDDNVAEYLKLANNADKQQSARIKQVFEKKNQKSAQTILQLQKKLEHYHRKLREIEQNGIPRQPKDVFRDMHQGLKDVGAKVTGFSEGVVDSVKGGLSSFSQATHSAAGAVVSKPREIASLIRNKFGSADNIANLKDSLEEGQEDGTGGKALGVIQNFQSSPKYGSEEDCSSATSGSVGANSTTGGPVGASSSKTNTLDMQSSGFDAILHEIQEIRETQARLEESFEDLKVRYQRDYTLIMQTLQEERYRCERLEEQLNDLTELHQNEILNLKQELASMEEKIAYQSYERARDIQEALEACQTRISKMELQQQQQQVVQLEGLENATARNLLGKFINILLAVMAVLLVFVSTVANCVVPLMKTRNRTFSTLLIVVFIAFLWKHWDAITGYLERFLSPPR
SIO_010081: TMCC1
subclass of: SO_0000673
so part of: TMCC1
location: join(133950..134195,135027..135961,142200..142335,144629..144943)
location: region:133950-144943:1
so has part: feature:133950-134195:1:exon
so has part: feature:135027-135961:1:exon
so has part: feature:142200-142335:1:exon
so has part: feature:144629-144943:1:exon

XP_056357392.1
type: Protein
SIO_000068: ncbiprotein

position:133950:1
position: 133950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133950-134195:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:135027-135961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142200-142335:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144629-144943:1:exon

TMCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: TMCC1
product: transmembrane and coiled-coil domain family 1, transcript variant X10
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501426.1
SIO_010081: TMCC1
subclass of: SO_0000673
so part of: TMCC1
location: join(134219..134601,135027..135961,142200..142335,144629..145243)
location: region:134219-145243:1
so has part: feature:134219-134601:1:exon
so has part: feature:135027-135961:1:exon
so has part: feature:142200-142335:1:exon
so has part: feature:144629-145243:1:exon

position:134219:1
position: 134219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134219-134601:1:exon

position:134601:1
position: 134601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:135027-135961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142200-142335:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144629-145243:1:exon

TMCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: TMCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and coiled-coil domains protein 1 isoform X8
translation: MHQGLKDVGAKVTGFSEGVVDSVKGGLSSFSQATHSAAGAVVSKPREIASLIRNKFGSADNIANLKDSLEEGQEDGTGGKALGVIQNFQSSPKYGSEEDCSSATSGSVGANSTTGGPVGASSSKTNTLDMQSSGFDAILHEIQEIRETQARLEESFEDLKVRYQRDYTLIMQTLQEERYRCERLEEQLNDLTELHQNEILNLKQELASMEEKIAYQSYERARDIQEALEACQTRISKMELQQQQQQVVQLEGLENATARNLLGKFINILLAVMAVLLVFVSTVANCVVPLMKTRNRTFSTLLIVVFIAFLWKHWDAITGYLERFLSPPR
SIO_010081: TMCC1
subclass of: SO_0000673
so part of: TMCC1
location: join(135423..135961,142200..142335,144629..144943)
location: region:135423-144943:1
so has part: feature:135423-135961:1:exon
so has part: feature:142200-142335:1:exon
so has part: feature:144629-144943:1:exon

XP_056357401.1
type: Protein
SIO_000068: ncbiprotein

position:135423:1
position: 135423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135423-135961:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:142200-142335:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144629-144943:1:exon

LOC130258235
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: LOC130258235
note: uncharacterized LOC130258235; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(135968..140904)
location: region:135968-140904:-1
so has part: feature:135968-140904:-1:exon
subclass of: SO_0000011

130258235
type: Gene
SIO_000068: ncbigene

position:135968:-1
position: 135968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140904:-1
position: 140904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135968-140904:-1:exon

LOC130258235
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2939378
nc RNA class: lncRNA
gene: LOC130258235
product: uncharacterized LOC130258235
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008841454.1
SIO_010081: LOC130258235
subclass of: SO_0000673
so part of: LOC130258235
location: complement(join(135968..136150,137981..138105,138569..140904))
location: region:135968-140904:-1
so has part: feature:138569-140904:-1:exon
so has part: feature:137981-138105:-1:exon
so has part: feature:135968-136150:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:138569-140904:-1:exon

position:138569:-1
position: 138569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:137981-138105:-1:exon

position:137981:-1
position: 137981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138105:-1
position: 138105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:135968-136150:-1:exon

position:136150:-1
position: 136150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLXND1
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: PLXND1
note: plexin D1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 166342..233257
location: region:166342-233257:1
so has part: feature:166342-233257:1:exon
subclass of: SO_0000010

130258162
type: Gene
SIO_000068: ncbigene

position:166342:1
position: 166342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233257:1
position: 233257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166342-233257:1:exon

PLXND1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: PLXND1
product: plexin D1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501294.1
SIO_010081: PLXND1
subclass of: SO_0000673
so part of: PLXND1
location: join(166342..167813,180327..180503,183454..183585,186662..186762,187420..187549,188192..188366,189759..189867,190630..190732,193515..193622,195351..195440,196299..196392,198670..198833,200532..200683,200926..201025,203404..203543,204187..204354,206231..206321,206727..207002,207911..208060,210047..210161,211110..211217,211845..211957,213091..213198,213723..213853,214211..214409,220030..220176,220889..221045,221203..221306,222255..222318,223156..223190,224244..224348,225036..225199,226575..226722,229106..229246,230053..230127,230752..233257)
location: region:166342-233257:1
so has part: feature:166342-167813:1:exon
so has part: feature:180327-180503:1:exon
so has part: feature:183454-183585:1:exon
so has part: feature:186662-186762:1:exon
so has part: feature:187420-187549:1:exon
so has part: feature:188192-188366:1:exon
so has part: feature:189759-189867:1:exon
so has part: feature:190630-190732:1:exon
so has part: feature:193515-193622:1:exon
so has part: feature:195351-195440:1:exon
so has part: feature:196299-196392:1:exon
so has part: feature:198670-198833:1:exon
so has part: feature:200532-200683:1:exon
so has part: feature:200926-201025:1:exon
so has part: feature:203404-203543:1:exon
so has part: feature:204187-204354:1:exon
so has part: feature:206231-206321:1:exon
so has part: feature:206727-207002:1:exon
so has part: feature:207911-208060:1:exon
so has part: feature:210047-210161:1:exon
so has part: feature:211110-211217:1:exon
so has part: feature:211845-211957:1:exon
so has part: feature:213091-213198:1:exon
so has part: feature:213723-213853:1:exon
so has part: feature:214211-214409:1:exon
so has part: feature:220030-220176:1:exon
so has part: feature:220889-221045:1:exon
so has part: feature:221203-221306:1:exon
so has part: feature:222255-222318:1:exon
so has part: feature:223156-223190:1:exon
so has part: feature:224244-224348:1:exon
so has part: feature:225036-225199:1:exon
so has part: feature:226575-226722:1:exon
so has part: feature:229106-229246:1:exon
so has part: feature:230053-230127:1:exon
so has part: feature:230752-233257:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:166342-167813:1:exon

position:167813:1
position: 167813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:180327-180503:1:exon

position:180327:1
position: 180327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180503:1
position: 180503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:183454-183585:1:exon

position:183454:1
position: 183454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183585:1
position: 183585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:186662-186762:1:exon

position:186662:1
position: 186662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186762:1
position: 186762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:187420-187549:1:exon

position:187420:1
position: 187420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187549:1
position: 187549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:188192-188366:1:exon

position:188192:1
position: 188192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188366:1
position: 188366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:189759-189867:1:exon

position:189759:1
position: 189759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189867:1
position: 189867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:190630-190732:1:exon

position:190630:1
position: 190630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190732:1
position: 190732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:193515-193622:1:exon

position:193515:1
position: 193515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193622:1
position: 193622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:195351-195440:1:exon

position:195351:1
position: 195351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195440:1
position: 195440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:196299-196392:1:exon

position:196299:1
position: 196299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196392:1
position: 196392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:198670-198833:1:exon

position:198670:1
position: 198670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198833:1
position: 198833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:200532-200683:1:exon

position:200532:1
position: 200532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200683:1
position: 200683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:200926-201025:1:exon

position:200926:1
position: 200926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201025:1
position: 201025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:203404-203543:1:exon

position:203404:1
position: 203404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203543:1
position: 203543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:204187-204354:1:exon

position:204187:1
position: 204187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204354:1
position: 204354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:206231-206321:1:exon

position:206231:1
position: 206231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206321:1
position: 206321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:206727-207002:1:exon

position:206727:1
position: 206727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207002:1
position: 207002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:207911-208060:1:exon

position:207911:1
position: 207911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208060:1
position: 208060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:210047-210161:1:exon

position:210047:1
position: 210047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210161:1
position: 210161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:211110-211217:1:exon

position:211110:1
position: 211110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211217:1
position: 211217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:211845-211957:1:exon

position:211845:1
position: 211845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211957:1
position: 211957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:213091-213198:1:exon

position:213091:1
position: 213091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213198:1
position: 213198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:213723-213853:1:exon

position:213723:1
position: 213723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213853:1
position: 213853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:214211-214409:1:exon

position:214211:1
position: 214211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214409:1
position: 214409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:220030-220176:1:exon

position:220030:1
position: 220030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220176:1
position: 220176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:220889-221045:1:exon

position:220889:1
position: 220889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221045:1
position: 221045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:221203-221306:1:exon

position:221203:1
position: 221203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221306:1
position: 221306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:222255-222318:1:exon

position:222255:1
position: 222255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222318:1
position: 222318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:223156-223190:1:exon

position:223156:1
position: 223156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223190:1
position: 223190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:224244-224348:1:exon

position:224244:1
position: 224244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224348:1
position: 224348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:225036-225199:1:exon

position:225036:1
position: 225036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225199:1
position: 225199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:226575-226722:1:exon

position:226575:1
position: 226575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226722:1
position: 226722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:229106-229246:1:exon

position:229106:1
position: 229106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229246:1
position: 229246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:230053-230127:1:exon

position:230053:1
position: 230053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230127:1
position: 230127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:230752-233257:1:exon

position:230752:1
position: 230752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLXND1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: PLXND1
product: plexin D1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501295.1
SIO_010081: PLXND1
subclass of: SO_0000673
so part of: PLXND1
location: join(166342..167813,180327..180503,183454..183585,186662..186762,187420..187549,188192..188366,189759..189867,190630..190732,193518..193622,195351..195440,196299..196392,198670..198833,200532..200683,200926..201025,203404..203543,204187..204354,206231..206321,206727..207002,207911..208060,210047..210161,211110..211217,211845..211957,213091..213198,213723..213853,214211..214409,220030..220176,220889..221045,221203..221306,222255..222318,223156..223190,224244..224348,225036..225199,226575..226722,229106..229246,230053..230127,230752..233257)
location: region:166342-233257:1
so has part: feature:166342-167813:1:exon
so has part: feature:180327-180503:1:exon
so has part: feature:183454-183585:1:exon
so has part: feature:186662-186762:1:exon
so has part: feature:187420-187549:1:exon
so has part: feature:188192-188366:1:exon
so has part: feature:189759-189867:1:exon
so has part: feature:190630-190732:1:exon
so has part: feature:193518-193622:1:exon
so has part: feature:195351-195440:1:exon
so has part: feature:196299-196392:1:exon
so has part: feature:198670-198833:1:exon
so has part: feature:200532-200683:1:exon
so has part: feature:200926-201025:1:exon
so has part: feature:203404-203543:1:exon
so has part: feature:204187-204354:1:exon
so has part: feature:206231-206321:1:exon
so has part: feature:206727-207002:1:exon
so has part: feature:207911-208060:1:exon
so has part: feature:210047-210161:1:exon
so has part: feature:211110-211217:1:exon
so has part: feature:211845-211957:1:exon
so has part: feature:213091-213198:1:exon
so has part: feature:213723-213853:1:exon
so has part: feature:214211-214409:1:exon
so has part: feature:220030-220176:1:exon
so has part: feature:220889-221045:1:exon
so has part: feature:221203-221306:1:exon
so has part: feature:222255-222318:1:exon
so has part: feature:223156-223190:1:exon
so has part: feature:224244-224348:1:exon
so has part: feature:225036-225199:1:exon
so has part: feature:226575-226722:1:exon
so has part: feature:229106-229246:1:exon
so has part: feature:230053-230127:1:exon
so has part: feature:230752-233257:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:166342-167813:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:180327-180503:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:183454-183585:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:186662-186762:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:187420-187549:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:188192-188366:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:189759-189867:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:190630-190732:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:193518-193622:1:exon

position:193518:1
position: 193518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:195351-195440:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:196299-196392:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:198670-198833:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:200532-200683:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:200926-201025:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:203404-203543:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:204187-204354:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:206231-206321:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:206727-207002:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:207911-208060:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:210047-210161:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:211110-211217:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:211845-211957:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:213091-213198:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:213723-213853:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:214211-214409:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:220030-220176:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:220889-221045:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:221203-221306:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:222255-222318:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:223156-223190:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:224244-224348:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:225036-225199:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:226575-226722:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:229106-229246:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:230053-230127:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:230752-233257:1:exon

PLXND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: PLXND1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plexin-D1 isoform X1
translation: MAPAAAAAPAPAPAAAAEPRPPALLPLPLLLPLLMPLLPLLLPARAAGLEVQRKFLSPTLTNNFALDGPGSRVYLAAVNRLFQLSGGDLALEAEAAVGPVLDSPLCHAPQLPQASCEHPRVLTNNYNKILQPDPEQGVLVVCGSIYQGLCQLRSMANISAVAVRFPPGGSDSVSVVPSMLNVAANHPNASTVGLVLRRGGGGARLLVAATYTGFGSPFFPRNRSLEDHRFENTPEIAIRALNARGDLAKLFTFDINPSDDNILKIKQGDKARHKLSFVRAFLQHGAAPPARRPYAYLALNSEANAGDKESPAHSLLARICLGEPAEATLNGSGETKKLTESYIQLGLRCGGAADAFTRLVSVFPARAAWRGPAAAPGPAPAPEELLFGVFERAGAGGARGRPQSALCVFRFSEIEETIRAARNSCFVSPAAGMVTVLDSVVQGTGPACEKRNIQLQPEQLDCGAAHLQHPLAIVNPITASPIFTYSRLTAVAVASVNNYTVAFLGTASGGLLKINLDSTMKVISRRSISVAYGEPVHPIMQFDPSDSTYLYLMTSYQMTRVKVAACSLYPTCRECLAAADAYCGWCTMETRCSLQHECTNFTGTNFWASVSGGVQQCPSMTILEPEINIDKENPALIIQINGTIPNLNGTNISCDYGNNIHTVARVAGDYVNQFIYCSLLPREKYPAFPDDQDHVVVEASLRVNNKNIIQANFTIYDCKRIGSIYPKRACTSCLSARWKCHWCPSAYSCVSNHSQCEDALQMEQKKVDCPQIVPAPLEPMPTGVSRSIMISVANATFPKETALECHFGTDGTFEARWVNSSAVECVHVLLHTSEKSHRFPVNLQLKDKPDRFIDSPEMMTVEVYNCATGSADCSQCLGREDLGHRCLWSEGSSSCRLQPEPPQLPGACPAPEIRKIEPLRGPLEGGTLLTIRGRNLGRRFSDVVGAVRVGAVPCVPLPHRYSVSETVVCQTGEAPEAFSDVVTVNVSREGRSRERYSYVLPVVQSISPPNGPKAGGTRVTIRGSRLDVGSELRVLINSSKQCTDLSRSDSSITCTMPAVELPSAVPVCVQFENKSCASHNITFKYEKNPVISDINPKKSQISGGRIITLEGRGFGLVQNVSMVVRGIGREHTRCQVHTDTAITCPSPAASNVTAGAKPAPVDFYLNGRLYTDERLALDEELSPEEALHVSKFSLGYYADPQFSTAKKEKWIKHHPGEPLTLVIHKEPDSLGLESNEYQVKIGLISCEIQIVSDKVIHCSINESLSSSERQLPVTIQVGKFNYTIAMLHLGGGETAIIVSIVICSILLVLSVVALFVFCTKSRRAERYWQKTLLQMEEMESQIREEIRKGFAELQTDMTDLTKELNRSQGIPFLEYKHFVTRTFFPKCSSLYEECYILPSQQLSSQLGSHVQETHPLLVGEWKIPENCRPNMEEGISLFSTLLNNKHFLIVFVHALEQQKDFAVRDRCNLASLLTIALHGKLEYYTSIMKDLLVDLIDASASKNPKLMLRRTESVVEKMLTNWMSICMYSYLRETVGEPFFLLICAIKQQINKGSIDAITGKARYTLNEEWLLRENIEAKPRNLNVSFQGCGMDSLSVRAMDTDTLSQVKEKILEAFCKNVPYSQWPRVEDVDLEWFATSTDSYILRDLDDTSVVEDGRKKLNTLAHYKIPEGASLAMSLTDKKDTTLSRVKDLDTEKYFHLVLPTDESVEHKKSHRQSHRKKVLPEIYLTRLLSTKGTLQKFLDDLFKAILSIRDDKPPVAVKYFFDFLEEQAEKRGITDPDTLHIWKTNSLPLRFWVNILKNPQFVFDIDKTDHIDACLSVIAQAFIDACSLSDLQLGKDSPTNKLLYAKEIPEYRKIVQRYYKQIHDMAPLSEQEMNAHLAEESRKYRNEFNTNVAMAEIYKYAKRYRSQIVAALDANPTTKRTQLQHKFEQVIALMEDNIYESCSEA
SIO_010081: PLXND1
subclass of: SO_0000673
so part of: PLXND1
location: join(166452..167813,180327..180503,183454..183585,186662..186762,187420..187549,188192..188366,189759..189867,190630..190732,193515..193622,195351..195440,196299..196392,198670..198833,200532..200683,200926..201025,203404..203543,204187..204354,206231..206321,206727..207002,207911..208060,210047..210161,211110..211217,211845..211957,213091..213198,213723..213853,214211..214409,220030..220176,220889..221045,221203..221306,222255..222318,223156..223190,224244..224348,225036..225199,226575..226722,229106..229246,230053..230127,230752..230868)
location: region:166452-230868:1
so has part: feature:166452-167813:1:exon
so has part: feature:180327-180503:1:exon
so has part: feature:183454-183585:1:exon
so has part: feature:186662-186762:1:exon
so has part: feature:187420-187549:1:exon
so has part: feature:188192-188366:1:exon
so has part: feature:189759-189867:1:exon
so has part: feature:190630-190732:1:exon
so has part: feature:193515-193622:1:exon
so has part: feature:195351-195440:1:exon
so has part: feature:196299-196392:1:exon
so has part: feature:198670-198833:1:exon
so has part: feature:200532-200683:1:exon
so has part: feature:200926-201025:1:exon
so has part: feature:203404-203543:1:exon
so has part: feature:204187-204354:1:exon
so has part: feature:206231-206321:1:exon
so has part: feature:206727-207002:1:exon
so has part: feature:207911-208060:1:exon
so has part: feature:210047-210161:1:exon
so has part: feature:211110-211217:1:exon
so has part: feature:211845-211957:1:exon
so has part: feature:213091-213198:1:exon
so has part: feature:213723-213853:1:exon
so has part: feature:214211-214409:1:exon
so has part: feature:220030-220176:1:exon
so has part: feature:220889-221045:1:exon
so has part: feature:221203-221306:1:exon
so has part: feature:222255-222318:1:exon
so has part: feature:223156-223190:1:exon
so has part: feature:224244-224348:1:exon
so has part: feature:225036-225199:1:exon
so has part: feature:226575-226722:1:exon
so has part: feature:229106-229246:1:exon
so has part: feature:230053-230127:1:exon
so has part: feature:230752-230868:1:exon

XP_056357269.1
type: Protein
SIO_000068: ncbiprotein

position:166452:1
position: 166452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230868:1
position: 230868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166452-167813:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:180327-180503:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:183454-183585:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:186662-186762:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:187420-187549:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:188192-188366:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:189759-189867:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:190630-190732:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:193515-193622:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:195351-195440:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:196299-196392:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:198670-198833:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:200532-200683:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:200926-201025:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:203404-203543:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:204187-204354:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:206231-206321:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:206727-207002:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:207911-208060:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:210047-210161:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:211110-211217:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:211845-211957:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:213091-213198:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:213723-213853:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:214211-214409:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:220030-220176:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:220889-221045:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:221203-221306:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:222255-222318:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:223156-223190:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:224244-224348:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:225036-225199:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:226575-226722:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:229106-229246:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:230053-230127:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:230752-230868:1:exon

PLXND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: PLXND1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plexin-D1 isoform X2
translation: MAPAAAAAPAPAPAAAAEPRPPALLPLPLLLPLLMPLLPLLLPARAAGLEVQRKFLSPTLTNNFALDGPGSRVYLAAVNRLFQLSGGDLALEAEAAVGPVLDSPLCHAPQLPQASCEHPRVLTNNYNKILQPDPEQGVLVVCGSIYQGLCQLRSMANISAVAVRFPPGGSDSVSVVPSMLNVAANHPNASTVGLVLRRGGGGARLLVAATYTGFGSPFFPRNRSLEDHRFENTPEIAIRALNARGDLAKLFTFDINPSDDNILKIKQGDKARHKLSFVRAFLQHGAAPPARRPYAYLALNSEANAGDKESPAHSLLARICLGEPAEATLNGSGETKKLTESYIQLGLRCGGAADAFTRLVSVFPARAAWRGPAAAPGPAPAPEELLFGVFERAGAGGARGRPQSALCVFRFSEIEETIRAARNSCFVSPAAGMVTVLDSVVQGTGPACEKRNIQLQPEQLDCGAAHLQHPLAIVNPITASPIFTYSRLTAVAVASVNNYTVAFLGTASGGLLKINLDSTMKVISRRSISVAYGEPVHPIMQFDPSDSTYLYLMTSYQMTRVKVAACSLYPTCRECLAAADAYCGWCTMETRCSLQHECTNFTGTNFWASVSGGVQQCPSMTILEPEINIDKENPALIIQINGTIPNLNGTNISCDYGNNIHTVARVAGDYVNQFIYCSLLPREKYPAFPDDQDHVVVEASLRVNNKNIIQANFTIYDCKRIGSIYPKRACTSCLSARWKCHWCPSAYSCVSNHSQCEDALQMEKKVDCPQIVPAPLEPMPTGVSRSIMISVANATFPKETALECHFGTDGTFEARWVNSSAVECVHVLLHTSEKSHRFPVNLQLKDKPDRFIDSPEMMTVEVYNCATGSADCSQCLGREDLGHRCLWSEGSSSCRLQPEPPQLPGACPAPEIRKIEPLRGPLEGGTLLTIRGRNLGRRFSDVVGAVRVGAVPCVPLPHRYSVSETVVCQTGEAPEAFSDVVTVNVSREGRSRERYSYVLPVVQSISPPNGPKAGGTRVTIRGSRLDVGSELRVLINSSKQCTDLSRSDSSITCTMPAVELPSAVPVCVQFENKSCASHNITFKYEKNPVISDINPKKSQISGGRIITLEGRGFGLVQNVSMVVRGIGREHTRCQVHTDTAITCPSPAASNVTAGAKPAPVDFYLNGRLYTDERLALDEELSPEEALHVSKFSLGYYADPQFSTAKKEKWIKHHPGEPLTLVIHKEPDSLGLESNEYQVKIGLISCEIQIVSDKVIHCSINESLSSSERQLPVTIQVGKFNYTIAMLHLGGGETAIIVSIVICSILLVLSVVALFVFCTKSRRAERYWQKTLLQMEEMESQIREEIRKGFAELQTDMTDLTKELNRSQGIPFLEYKHFVTRTFFPKCSSLYEECYILPSQQLSSQLGSHVQETHPLLVGEWKIPENCRPNMEEGISLFSTLLNNKHFLIVFVHALEQQKDFAVRDRCNLASLLTIALHGKLEYYTSIMKDLLVDLIDASASKNPKLMLRRTESVVEKMLTNWMSICMYSYLRETVGEPFFLLICAIKQQINKGSIDAITGKARYTLNEEWLLRENIEAKPRNLNVSFQGCGMDSLSVRAMDTDTLSQVKEKILEAFCKNVPYSQWPRVEDVDLEWFATSTDSYILRDLDDTSVVEDGRKKLNTLAHYKIPEGASLAMSLTDKKDTTLSRVKDLDTEKYFHLVLPTDESVEHKKSHRQSHRKKVLPEIYLTRLLSTKGTLQKFLDDLFKAILSIRDDKPPVAVKYFFDFLEEQAEKRGITDPDTLHIWKTNSLPLRFWVNILKNPQFVFDIDKTDHIDACLSVIAQAFIDACSLSDLQLGKDSPTNKLLYAKEIPEYRKIVQRYYKQIHDMAPLSEQEMNAHLAEESRKYRNEFNTNVAMAEIYKYAKRYRSQIVAALDANPTTKRTQLQHKFEQVIALMEDNIYESCSEA
SIO_010081: PLXND1
subclass of: SO_0000673
so part of: PLXND1
location: join(166452..167813,180327..180503,183454..183585,186662..186762,187420..187549,188192..188366,189759..189867,190630..190732,193518..193622,195351..195440,196299..196392,198670..198833,200532..200683,200926..201025,203404..203543,204187..204354,206231..206321,206727..207002,207911..208060,210047..210161,211110..211217,211845..211957,213091..213198,213723..213853,214211..214409,220030..220176,220889..221045,221203..221306,222255..222318,223156..223190,224244..224348,225036..225199,226575..226722,229106..229246,230053..230127,230752..230868)
location: region:166452-230868:1
so has part: feature:166452-167813:1:exon
so has part: feature:180327-180503:1:exon
so has part: feature:183454-183585:1:exon
so has part: feature:186662-186762:1:exon
so has part: feature:187420-187549:1:exon
so has part: feature:188192-188366:1:exon
so has part: feature:189759-189867:1:exon
so has part: feature:190630-190732:1:exon
so has part: feature:193518-193622:1:exon
so has part: feature:195351-195440:1:exon
so has part: feature:196299-196392:1:exon
so has part: feature:198670-198833:1:exon
so has part: feature:200532-200683:1:exon
so has part: feature:200926-201025:1:exon
so has part: feature:203404-203543:1:exon
so has part: feature:204187-204354:1:exon
so has part: feature:206231-206321:1:exon
so has part: feature:206727-207002:1:exon
so has part: feature:207911-208060:1:exon
so has part: feature:210047-210161:1:exon
so has part: feature:211110-211217:1:exon
so has part: feature:211845-211957:1:exon
so has part: feature:213091-213198:1:exon
so has part: feature:213723-213853:1:exon
so has part: feature:214211-214409:1:exon
so has part: feature:220030-220176:1:exon
so has part: feature:220889-221045:1:exon
so has part: feature:221203-221306:1:exon
so has part: feature:222255-222318:1:exon
so has part: feature:223156-223190:1:exon
so has part: feature:224244-224348:1:exon
so has part: feature:225036-225199:1:exon
so has part: feature:226575-226722:1:exon
so has part: feature:229106-229246:1:exon
so has part: feature:230053-230127:1:exon
so has part: feature:230752-230868:1:exon

XP_056357270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:166452-167813:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:180327-180503:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:183454-183585:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:186662-186762:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:187420-187549:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:188192-188366:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:189759-189867:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:190630-190732:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:193518-193622:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:195351-195440:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:196299-196392:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:198670-198833:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:200532-200683:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:200926-201025:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:203404-203543:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:204187-204354:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:206231-206321:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:206727-207002:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:207911-208060:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:210047-210161:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:211110-211217:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:211845-211957:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:213091-213198:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:213723-213853:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:214211-214409:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:220030-220176:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:220889-221045:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:221203-221306:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:222255-222318:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:223156-223190:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:224244-224348:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:225036-225199:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:226575-226722:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:229106-229246:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:230053-230127:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:230752-230868:1:exon

LOC130258164
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: LOC130258164
note: histone H1.8; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(233969..235985)
location: region:233969-235985:-1
so has part: feature:233969-235985:-1:exon
subclass of: SO_0000010

130258164
type: Gene
SIO_000068: ncbigene

position:233969:-1
position: 233969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235985:-1
position: 235985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233969-235985:-1:exon

LOC130258164
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: LOC130258164
product: histone H1.8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 long SRA reads, 3 Proteins
transcript id: XM_056501298.1
SIO_010081: LOC130258164
subclass of: SO_0000673
so part of: LOC130258164
location: complement(join(233969..235275,235353..235402,235473..235596,235703..235985))
location: region:233969-235985:-1
so has part: feature:235703-235985:-1:exon
so has part: feature:235473-235596:-1:exon
so has part: feature:235353-235402:-1:exon
so has part: feature:233969-235275:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:235703-235985:-1:exon

position:235703:-1
position: 235703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:235473-235596:-1:exon

position:235473:-1
position: 235473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235596:-1
position: 235596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:235353-235402:-1:exon

position:235353:-1
position: 235353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235402:-1
position: 235402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:233969-235275:-1:exon

position:235275:-1
position: 235275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC130258164
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: LOC130258164
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H1.8
translation: MIPLPAAKAPGAAQRGKAQHPPTLQMVKEALRAHDEKKGASVVAIKRFILAKYPSVDPIRLKYLLKQALSKGLSCGELVRPHNSSAVGATGTFKLARQRPQHKQQPGPADPEGGQAPQPVQKGTSKGPVAGAQQQGATKQQPAATRKAKAVKAKPRAAQKPRSDGAKQPQARGKGPAGLPKAASYRQAPRKGHSGPSTALAAESTGESDSDSSDSSDSSASPGVKGPRKAPRAKSKGKVPKGAQQNAPKAQGAQAKKPRVTPGAGQGKKVRPKKAAPVAAEKKAP
SIO_010081: LOC130258164
subclass of: SO_0000673
so part of: LOC130258164
location: complement(join(234874..235275,235353..235402,235473..235596,235703..235984))
location: region:234874-235984:-1
so has part: feature:235703-235984:-1:exon
so has part: feature:235473-235596:-1:exon
so has part: feature:235353-235402:-1:exon
so has part: feature:234874-235275:-1:exon

XP_056357273.1
type: Protein
SIO_000068: ncbiprotein

position:234874:-1
position: 234874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235984:-1
position: 235984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235703-235984:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:235473-235596:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235353-235402:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:234874-235275:-1:exon

RHO
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: RHO
note: rhodopsin; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(238000..242702)
location: region:238000-242702:-1
so has part: feature:238000-242702:-1:exon
subclass of: SO_0000010

130258163
type: Gene
SIO_000068: ncbigene

position:238000:-1
position: 238000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242702:-1
position: 242702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238000-242702:-1:exon

RHO
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: RHO
product: rhodopsin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 105 Proteins
transcript id: XM_056501296.1
SIO_010081: RHO
subclass of: SO_0000673
so part of: RHO
location: complement(join(238000..239570,239984..240223,240450..240615,240726..240894,241805..242702))
location: region:238000-242702:-1
so has part: feature:241805-242702:-1:exon
so has part: feature:240726-240894:-1:exon
so has part: feature:240450-240615:-1:exon
so has part: feature:239984-240223:-1:exon
so has part: feature:238000-239570:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:241805-242702:-1:exon

position:241805:-1
position: 241805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:240726-240894:-1:exon

position:240726:-1
position: 240726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240894:-1
position: 240894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:240450-240615:-1:exon

position:240450:-1
position: 240450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240615:-1
position: 240615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:239984-240223:-1:exon

position:239984:-1
position: 239984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240223:-1
position: 240223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:238000-239570:-1:exon

position:239570:-1
position: 239570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RHO
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: RHO
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rhodopsin
translation: MNGTEGQDFYVPMSNKTGVVRSPFEYPQYYLAEPWKYSALAAYMFMLILLGFPINFLTLYVTIQHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMNGYFVFGVTGCYIEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFSWIMALACAAPPLFGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFMIPLAIIFFCYGNLVCTVKEAAAQQQESATTQKAEKEVTRMVIIMVISFLICWVPYASVAFYIFTNQGSDFGPIFMTIPAFFAKSSAIYNPVIYIVMNKQFRNCMITTLCCGKNPLGDEDTSAGKTETSSVSTSQVSPA
SIO_010081: RHO
subclass of: SO_0000673
so part of: RHO
location: complement(join(239451..239570,239984..240223,240450..240615,240726..240894,241805..242165))
location: region:239451-242165:-1
so has part: feature:241805-242165:-1:exon
so has part: feature:240726-240894:-1:exon
so has part: feature:240450-240615:-1:exon
so has part: feature:239984-240223:-1:exon
so has part: feature:239451-239570:-1:exon

XP_056357271.1
type: Protein
SIO_000068: ncbiprotein

position:239451:-1
position: 239451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242165:-1
position: 242165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241805-242165:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:240726-240894:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:240450-240615:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:239984-240223:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239451-239570:-1:exon

IFT122
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: IFT122
note: intraflagellar transport 122; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(245770..274701)
location: region:245770-274701:-1
so has part: feature:245770-274701:-1:exon
subclass of: SO_0000010

130258412
type: Gene
SIO_000068: ncbigene

position:245770:-1
position: 245770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274701:-1
position: 274701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245770-274701:-1:exon

IFT122
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: IFT122
product: intraflagellar transport 122, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501741.1
SIO_010081: IFT122
subclass of: SO_0000673
so part of: IFT122
location: complement(join(245770..246197,246869..247030,247574..247653,248503..248619,248996..249107,250085..250250,251095..251195,252029..252126,253098..253238,254205..254307,254839..255010,255819..255985,259031..259192,261831..261884,263500..263640,264340..264537,265343..265507,266249..266386,266807..267009,267587..267725,268388..268579,269079..269154,269862..270008,270777..270843,271253..271329,272084..272162,272968..273052,274108..274174,274523..274701))
location: region:245770-274701:-1
so has part: feature:274523-274701:-1:exon
so has part: feature:274108-274174:-1:exon
so has part: feature:272968-273052:-1:exon
so has part: feature:272084-272162:-1:exon
so has part: feature:271253-271329:-1:exon
so has part: feature:270777-270843:-1:exon
so has part: feature:269862-270008:-1:exon
so has part: feature:269079-269154:-1:exon
so has part: feature:268388-268579:-1:exon
so has part: feature:267587-267725:-1:exon
so has part: feature:266807-267009:-1:exon
so has part: feature:266249-266386:-1:exon
so has part: feature:265343-265507:-1:exon
so has part: feature:264340-264537:-1:exon
so has part: feature:263500-263640:-1:exon
so has part: feature:261831-261884:-1:exon
so has part: feature:259031-259192:-1:exon
so has part: feature:255819-255985:-1:exon
so has part: feature:254839-255010:-1:exon
so has part: feature:254205-254307:-1:exon
so has part: feature:253098-253238:-1:exon
so has part: feature:252029-252126:-1:exon
so has part: feature:251095-251195:-1:exon
so has part: feature:250085-250250:-1:exon
so has part: feature:248996-249107:-1:exon
so has part: feature:248503-248619:-1:exon
so has part: feature:247574-247653:-1:exon
so has part: feature:246869-247030:-1:exon
so has part: feature:245770-246197:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:274523-274701:-1:exon

position:274523:-1
position: 274523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:274108-274174:-1:exon

position:274108:-1
position: 274108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274174:-1
position: 274174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:272968-273052:-1:exon

position:272968:-1
position: 272968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273052:-1
position: 273052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:272084-272162:-1:exon

position:272084:-1
position: 272084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272162:-1
position: 272162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:271253-271329:-1:exon

position:271253:-1
position: 271253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271329:-1
position: 271329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:270777-270843:-1:exon

position:270777:-1
position: 270777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270843:-1
position: 270843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:269862-270008:-1:exon

position:269862:-1
position: 269862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270008:-1
position: 270008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:269079-269154:-1:exon

position:269079:-1
position: 269079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269154:-1
position: 269154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:268388-268579:-1:exon

position:268388:-1
position: 268388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268579:-1
position: 268579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:267587-267725:-1:exon

position:267587:-1
position: 267587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267725:-1
position: 267725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:266807-267009:-1:exon

position:266807:-1
position: 266807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267009:-1
position: 267009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:266249-266386:-1:exon

position:266249:-1
position: 266249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266386:-1
position: 266386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:265343-265507:-1:exon

position:265343:-1
position: 265343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265507:-1
position: 265507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:264340-264537:-1:exon

position:264340:-1
position: 264340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264537:-1
position: 264537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:263500-263640:-1:exon

position:263500:-1
position: 263500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263640:-1
position: 263640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:261831-261884:-1:exon

position:261831:-1
position: 261831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261884:-1
position: 261884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:259031-259192:-1:exon

position:259031:-1
position: 259031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259192:-1
position: 259192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:255819-255985:-1:exon

position:255819:-1
position: 255819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255985:-1
position: 255985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:254839-255010:-1:exon

position:254839:-1
position: 254839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255010:-1
position: 255010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:254205-254307:-1:exon

position:254205:-1
position: 254205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254307:-1
position: 254307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:253098-253238:-1:exon

position:253098:-1
position: 253098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253238:-1
position: 253238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:252029-252126:-1:exon

position:252029:-1
position: 252029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252126:-1
position: 252126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:251095-251195:-1:exon

position:251095:-1
position: 251095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251195:-1
position: 251195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:250085-250250:-1:exon

position:250085:-1
position: 250085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250250:-1
position: 250250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:248996-249107:-1:exon

position:248996:-1
position: 248996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249107:-1
position: 249107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:248503-248619:-1:exon

position:248503:-1
position: 248503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248619:-1
position: 248619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:247574-247653:-1:exon

position:247574:-1
position: 247574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247653:-1
position: 247653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:246869-247030:-1:exon

position:246869:-1
position: 246869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247030:-1
position: 247030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:245770-246197:-1:exon

position:246197:-1
position: 246197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IFT122
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: IFT122
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 122 homolog
translation: MRAALTWRDRAEQCIYDLAFKPDGTQLVIAAGNRLLVYDTSDGTLIQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYTHNDSIQCVSYNPLTHQLASCSSGDFGLWSPEQKSVSKHKTSSKITCCSWTNDGQYLALGMFNGIVSIRNKNGDEKVKIERPGGSSSPIWSICWNPSRDERNDILAVADWGQKLSFYHLSGKQIGKDRVLNFDPCCISYFTKGEYLLLGGSDRQVSLFTRDGVRLGTVGEQSSWVWTCKVKPDSNYVAVGCQDGTISFYQLIFSTVHGLYKDRYAYRDSMTDVIVQHLITEQKVRIKGRELVKKIAIYKNRLAIQMPEKILIYELYSDDSADMYYRVKEKIIKKFECNLLVVCSDHIILCQEKRLQCLSFSGVKEREWLMESLIRYIKVIGGPPGREGLLVGLKNGQILKIFVDNALAMVLLKQATAVRCLDMSASRSKLAVVDENDTCLVYDIHTKELLFQEPNANSVAWNTQCEDMLCFSGGGYLNIKASNFPVHQQKLQGFVVGYNGSKIFCLHVFSMSAVEVPQSAPMYQYLERKMFKEAYQIACLGVTDADWRDLAMEALEGLEFETAKKAFTRVRDLRYLELISSIEDRKKHGENNSDLFLADVFAYQGKFQEAAKLYQRSGHEPLALEMYSDLRMFEHAKEFLGSGDPKDTKMLIKKQADWAKDINEPKAAVEMYLSAGEHMKAIEISGDHGWLDMLIEIARKLDKAEREPLAKCAFYFKQLANPGYAAETYMKIGDLKALVQLHVETHHWEEAFVLCEKHPEFKDEVYVPYAQWLAESDRFEEAQKAFHRAGRQTEAVRVLEQLTHNAVLESRFNDAAYYYWMLSMQCLDIARENEAQQTEMLQKFHHFQHLAEVYHVYHFIQRYTEEPFSFHLPETLFNISRFLLHSLTKETPLGISKVNTLLALAKQSKALGAYKLARHAYDKLQGLQIPARFQKSVELGSLTIRSKPFHDSEELVPLCYRCSTNNPLLNNLGNVCINCRQPFVFSASSYEVLHLVEFYLEDGITDEEAIALIDLEAPRVSKWKETMSEHTQSLKLDDSTDIIEDGDPFTAKLSFEGGSSFAPVVLGRAALRALSRRDVLLRRWPPPLRCQFFRSLLPDAAVTVCPSCFQMFHTEDYELLILQHNCCPFCRRRIDESNQ
SIO_010081: IFT122
subclass of: SO_0000673
so part of: IFT122
location: complement(join(246108..246197,246869..247030,247574..247653,248503..248619,248996..249107,250085..250250,251095..251195,252029..252126,253098..253238,254205..254307,254839..255010,255819..255985,259031..259192,261831..261884,263500..263640,264340..264537,265343..265507,266249..266386,266807..267009,267587..267725,268388..268579,269079..269154,269862..270008,270777..270843,271253..271329,272084..272162,272968..273052,274108..274174,274523..274563))
location: region:246108-274563:-1
so has part: feature:274523-274563:-1:exon
so has part: feature:274108-274174:-1:exon
so has part: feature:272968-273052:-1:exon
so has part: feature:272084-272162:-1:exon
so has part: feature:271253-271329:-1:exon
so has part: feature:270777-270843:-1:exon
so has part: feature:269862-270008:-1:exon
so has part: feature:269079-269154:-1:exon
so has part: feature:268388-268579:-1:exon
so has part: feature:267587-267725:-1:exon
so has part: feature:266807-267009:-1:exon
so has part: feature:266249-266386:-1:exon
so has part: feature:265343-265507:-1:exon
so has part: feature:264340-264537:-1:exon
so has part: feature:263500-263640:-1:exon
so has part: feature:261831-261884:-1:exon
so has part: feature:259031-259192:-1:exon
so has part: feature:255819-255985:-1:exon
so has part: feature:254839-255010:-1:exon
so has part: feature:254205-254307:-1:exon
so has part: feature:253098-253238:-1:exon
so has part: feature:252029-252126:-1:exon
so has part: feature:251095-251195:-1:exon
so has part: feature:250085-250250:-1:exon
so has part: feature:248996-249107:-1:exon
so has part: feature:248503-248619:-1:exon
so has part: feature:247574-247653:-1:exon
so has part: feature:246869-247030:-1:exon
so has part: feature:246108-246197:-1:exon

XP_056357716.1
type: Protein
SIO_000068: ncbiprotein

position:246108:-1
position: 246108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274563:-1
position: 274563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274523-274563:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274108-274174:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:272968-273052:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:272084-272162:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:271253-271329:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:270777-270843:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:269862-270008:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:269079-269154:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:268388-268579:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:267587-267725:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:266807-267009:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:266249-266386:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:265343-265507:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:264340-264537:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:263500-263640:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:261831-261884:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:259031-259192:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:255819-255985:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:254839-255010:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:254205-254307:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:253098-253238:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:252029-252126:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:251095-251195:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:250085-250250:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:248996-249107:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:248503-248619:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:247574-247653:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:246869-247030:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:246108-246197:-1:exon

IFT122
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 2939378
gene: IFT122
product: intraflagellar transport 122, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 long SRA reads
transcript id: XR_008841505.1
SIO_010081: IFT122
so part of: IFT122
location: complement(join(246942..247030,247574..247653,248534..248619,248996..249107,250085..250250,251095..251195,252029..252126,253098..253238,254205..254307,254839..255010,255819..255985,259031..259192,261831..261884,263500..263640,264340..264537,265343..265507,266249..266386,266807..267009,267587..267725,268388..268579,269079..269154,269862..270008,270777..270843,271253..271329,272084..272162,272968..273052,274108..274174,274523..274701))
location: region:246942-274701:-1
so has part: feature:274523-274701:-1:exon
so has part: feature:274108-274174:-1:exon
so has part: feature:272968-273052:-1:exon
so has part: feature:272084-272162:-1:exon
so has part: feature:271253-271329:-1:exon
so has part: feature:270777-270843:-1:exon
so has part: feature:269862-270008:-1:exon
so has part: feature:269079-269154:-1:exon
so has part: feature:268388-268579:-1:exon
so has part: feature:267587-267725:-1:exon
so has part: feature:266807-267009:-1:exon
so has part: feature:266249-266386:-1:exon
so has part: feature:265343-265507:-1:exon
so has part: feature:264340-264537:-1:exon
so has part: feature:263500-263640:-1:exon
so has part: feature:261831-261884:-1:exon
so has part: feature:259031-259192:-1:exon
so has part: feature:255819-255985:-1:exon
so has part: feature:254839-255010:-1:exon
so has part: feature:254205-254307:-1:exon
so has part: feature:253098-253238:-1:exon
so has part: feature:252029-252126:-1:exon
so has part: feature:251095-251195:-1:exon
so has part: feature:250085-250250:-1:exon
so has part: feature:248996-249107:-1:exon
so has part: feature:248534-248619:-1:exon
so has part: feature:247574-247653:-1:exon
so has part: feature:246942-247030:-1:exon

position:246942:-1
position: 246942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274523-274701:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274108-274174:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:272968-273052:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:272084-272162:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:271253-271329:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:270777-270843:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:269862-270008:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:269079-269154:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:268388-268579:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:267587-267725:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:266807-267009:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:266249-266386:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:265343-265507:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:264340-264537:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:263500-263640:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:261831-261884:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:259031-259192:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:255819-255985:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:254839-255010:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:254205-254307:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:253098-253238:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:252029-252126:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:251095-251195:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:250085-250250:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:248996-249107:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:248534-248619:-1:exon

position:248534:-1
position: 248534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:247574-247653:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:246942-247030:-1:exon

MBD4
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: MBD4
note: methyl-CpG binding domain 4, DNA glycosylase; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 274804..277913
location: region:274804-277913:1
so has part: feature:274804-277913:1:exon
subclass of: SO_0000010

130258080
type: Gene
SIO_000068: ncbigene

position:274804:1
position: 274804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277913:1
position: 277913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274804-277913:1:exon

MBD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: MBD4
product: methyl-CpG binding domain 4, DNA glycosylase
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501104.1
SIO_010081: MBD4
subclass of: SO_0000673
so part of: MBD4
location: join(274804..274834,274952..275113,275304..276082,276335..276409,276700..276834,277069..277218,277464..277567,277703..277913)
location: region:274804-277913:1
so has part: feature:274804-274834:1:exon
so has part: feature:274952-275113:1:exon
so has part: feature:275304-276082:1:exon
so has part: feature:276335-276409:1:exon
so has part: feature:276700-276834:1:exon
so has part: feature:277069-277218:1:exon
so has part: feature:277464-277567:1:exon
so has part: feature:277703-277913:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:274804-274834:1:exon

position:274834:1
position: 274834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:274952-275113:1:exon

position:274952:1
position: 274952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275113:1
position: 275113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:275304-276082:1:exon

position:275304:1
position: 275304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276082:1
position: 276082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:276335-276409:1:exon

position:276335:1
position: 276335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276409:1
position: 276409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:276700-276834:1:exon

position:276700:1
position: 276700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276834:1
position: 276834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:277069-277218:1:exon

position:277069:1
position: 277069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277218:1
position: 277218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:277464-277567:1:exon

position:277464:1
position: 277464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277567:1
position: 277567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:277703-277913:1:exon

position:277703:1
position: 277703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MBD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: MBD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methyl-CpG-binding domain protein 4
translation: MAAGGPGGGSPSAAAEEEWPSPGEHGPAGPSAVPRGWQRVSSRRRAGRTAGRIDVYFVSPEGKKLRSKRALVDYLQKTGETTLKAADFDFTVPRGSTCSGLRGAVGTDLEKEDCQSKVQDLHAQNGAEAGIQNIQTGNGHLEAATSTMESKGLVIEGTNPEESLKTRRKGSYGKSVPTRRCGKGSERRNQGDPKSKRQRRISNGLETECVQKKRVHRQTDTRGAASQAVGGAGKALPGVSRARLRSLAGSQRELGHLPEEGPCCSDTPAARPEETSCALETGKVLDPGDLGQQERKSDTQVDAEPWARTGCSAGTMSPEESVPRTQVDRRKTSPYFSSKYSKEAPNPPRRKALRKWTPPRSPFNLIQETLFHDPWKLLIATIFLNKTAGKMAIPVLWEFLKKYPSPEVARAADWKEMSELLKPLGLYELRAKTIIRFSGEYLSKAWRYPIELHGIGKYGNDSYRIFCVNEWKEVQPQDHKLNVYHTWLWENHERLSID
SIO_010081: MBD4
subclass of: SO_0000673
so part of: MBD4
location: join(274821..274834,274952..275113,275304..276082,276335..276409,276700..276834,277069..277218,277464..277567,277703..277780)
location: region:274821-277780:1
so has part: feature:274821-274834:1:exon
so has part: feature:274952-275113:1:exon
so has part: feature:275304-276082:1:exon
so has part: feature:276335-276409:1:exon
so has part: feature:276700-276834:1:exon
so has part: feature:277069-277218:1:exon
so has part: feature:277464-277567:1:exon
so has part: feature:277703-277780:1:exon

XP_056357079.1
type: Protein
SIO_000068: ncbiprotein

position:274821:1
position: 274821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277780:1
position: 277780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274821-274834:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274952-275113:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:275304-276082:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:276335-276409:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:276700-276834:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:277069-277218:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:277464-277567:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:277703-277780:1:exon

RPL32
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: RPL32
note: ribosomal protein L32; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 278369..280406
location: region:278369-280406:1
so has part: feature:278369-280406:1:exon
subclass of: SO_0000010

130258082
type: Gene
SIO_000068: ncbigene

position:278369:1
position: 278369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280406:1
position: 280406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278369-280406:1:exon

RPL32
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: RPL32
product: ribosomal protein L32
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501108.1
SIO_010081: RPL32
subclass of: SO_0000673
so part of: RPL32
location: join(278369..278686,279203..279303,279491..279672,280225..280406)
location: region:278369-280406:1
so has part: feature:278369-278686:1:exon
so has part: feature:279203-279303:1:exon
so has part: feature:279491-279672:1:exon
so has part: feature:280225-280406:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:278369-278686:1:exon

position:278686:1
position: 278686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:279203-279303:1:exon

position:279203:1
position: 279203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279303:1
position: 279303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:279491-279672:1:exon

position:279491:1
position: 279491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279672:1
position: 279672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:280225-280406:1:exon

position:280225:1
position: 280225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPL32
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: RPL32
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L32
translation: MPALRPLVKPRIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPTGFRKFLVHNVKELEVLMMSNKSYCAEIAHNVSSKNRKVIVERAAQLAIKITNPNARLRSEENE
SIO_010081: RPL32
subclass of: SO_0000673
so part of: RPL32
location: join(279208..279303,279491..279672,280225..280354)
location: region:279208-280354:1
so has part: feature:279208-279303:1:exon
so has part: feature:279491-279672:1:exon
so has part: feature:280225-280354:1:exon

XP_056357083.1
type: Protein
SIO_000068: ncbiprotein

position:279208:1
position: 279208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280354:1
position: 280354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279208-279303:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:279491-279672:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:280225-280354:1:exon

LOC130258079
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: LOC130258079
note: cullin-associated NEDD8-dissociated protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(280501..293817)
location: region:280501-293817:-1
so has part: feature:280501-293817:-1:exon
subclass of: SO_0000010

130258079
type: Gene
SIO_000068: ncbigene

position:280501:-1
position: 280501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293817:-1
position: 293817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280501-293817:-1:exon

LOC130258079
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: LOC130258079
product: cullin-associated NEDD8-dissociated protein 1-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501103.1
SIO_010081: LOC130258079
subclass of: SO_0000673
so part of: LOC130258079
location: complement(join(280501..281871,281995..282102,282409..282573,282675..282844,283276..283371,283731..285236,285823..285964,286319..286611,286764..286909,287973..288078,288675..288931,289572..289695,290109..290263,291477..291620,293656..293817))
location: region:280501-293817:-1
so has part: feature:293656-293817:-1:exon
so has part: feature:291477-291620:-1:exon
so has part: feature:290109-290263:-1:exon
so has part: feature:289572-289695:-1:exon
so has part: feature:288675-288931:-1:exon
so has part: feature:287973-288078:-1:exon
so has part: feature:286764-286909:-1:exon
so has part: feature:286319-286611:-1:exon
so has part: feature:285823-285964:-1:exon
so has part: feature:283731-285236:-1:exon
so has part: feature:283276-283371:-1:exon
so has part: feature:282675-282844:-1:exon
so has part: feature:282409-282573:-1:exon
so has part: feature:281995-282102:-1:exon
so has part: feature:280501-281871:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:293656-293817:-1:exon

position:293656:-1
position: 293656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:291477-291620:-1:exon

position:291477:-1
position: 291477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291620:-1
position: 291620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:290109-290263:-1:exon

position:290109:-1
position: 290109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290263:-1
position: 290263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:289572-289695:-1:exon

position:289572:-1
position: 289572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289695:-1
position: 289695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:288675-288931:-1:exon

position:288675:-1
position: 288675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288931:-1
position: 288931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:287973-288078:-1:exon

position:287973:-1
position: 287973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288078:-1
position: 288078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:286764-286909:-1:exon

position:286764:-1
position: 286764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286909:-1
position: 286909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:286319-286611:-1:exon

position:286319:-1
position: 286319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286611:-1
position: 286611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:285823-285964:-1:exon

position:285823:-1
position: 285823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285964:-1
position: 285964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:283731-285236:-1:exon

position:283731:-1
position: 283731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285236:-1
position: 285236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:283276-283371:-1:exon

position:283276:-1
position: 283276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283371:-1
position: 283371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:282675-282844:-1:exon

position:282675:-1
position: 282675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282844:-1
position: 282844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:282409-282573:-1:exon

position:282409:-1
position: 282409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282573:-1
position: 282573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:281995-282102:-1:exon

position:281995:-1
position: 281995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282102:-1
position: 282102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:280501-281871:-1:exon

position:281871:-1
position: 281871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC130258079
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: LOC130258079
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cullin-associated NEDD8-dissociated protein 1-like
translation: MASVSYHISSLLEKMTSTDKDFRFMATNDLMMELQKDSIKLDEDSEKKVVKMLLKLLEDKNGEVQNLAVKCLGPLVGKVKEYQVETIVDTLCTNMLSDKEQLRDISSIGLKTVIAELPPAATGSTMTANVCKKITAQLTGAISKQEDVSVQLEALDILSDMLSRLGGTLYSFHSSILTCLLPQLTSPRLAVRKRAIIALGHLVLTCSGNIFSELTEHLLAELKRNESTSTTRTYIQCVAGISRQAGHRIGEHLEKIIPLIVQYCNVDDDELREYCFQAFESFVRRCPKEMDPHISSVMGLCLKYITFDPNYNYDNEEEEEEMMETENGEDEEQESSEEYSDDDDISWKVRRAAAKCLEAVVSSRPDLLHDFYTTLSPALISRFKEREENVKADIFNAYISLLKQTLPTQSWLHSSAASGKDDIPLAMLQKQVPNIIKALHKQLKEKSIKSRQGCFSLLTELASVLPGCLADHIPALIPGVVFSLVDKSSSSNMRIDTLSFLHVLLCNHQPEVFHPHVKALLPSVVACVGDPFYKITSEALLVTQQLVKVIRPLDKQYSFDAKPYVKDLFSATLKRLKAADIDQEVKERAISCMGQIIYNLGDHLSTDLQPTLKIFLERLKNEITRLTTVKALTLIANSPLQIDLRPILGEGLPILASFLRKNQRVLKLSTLNALDILVKSYSDSLKPAMIEAVLTELPALITENDMHVSQVTITFLTTLAKIYPSCISKISSSVLAEIFQLVHSPLLQGGALNAIIDFLQALVLSKPAAVGYPELLKQLTAPVYCPGAGGAALSLHRQALHSVASCVAALCSACPKEAPATVTQFVQDVKSPRSSPAVQVLAFLFLAEVGRSRNLSAQRELRSVLLEALASPSEEVKSAAAFALGSVSAGSLQEFLPLLLSEIGSQPKRQYLLLHSLKELISCSPAASLTPYVEDIWALLFKHCECTEEGTRSVVAECLGKLTLVSPAELLPRLRKQLSAGSPHARSTVVTAIKFTITDQPQPIDALLKGCIGDFLQTLQDPDLNVRRVALALFNSAAHNKPSLIRDLLSSVLPSLYNETKVRRELIREVEMGPFKHTVDDGLDVRKAAFECMYTLLESCLDRLDIYDYLNHVEDGLKDHYDIRMLTFIVLARLSVLCPSALLQRLERLIEPLRATCSTKVKAGSVKQEFEKQDELKRSAMRAVAALLTIPEVEKSPAMVEFSSHIRSSPEMASLFESIQKDSASLPTLESMDMS
SIO_010081: LOC130258079
subclass of: SO_0000673
so part of: LOC130258079
location: complement(join(281644..281871,281995..282102,282409..282573,282675..282844,283276..283371,283731..285236,285823..285964,286319..286611,286764..286909,287973..288078,288675..288931,289572..289695,290109..290263,291477..291620,293656..293723))
location: region:281644-293723:-1
so has part: feature:293656-293723:-1:exon
so has part: feature:291477-291620:-1:exon
so has part: feature:290109-290263:-1:exon
so has part: feature:289572-289695:-1:exon
so has part: feature:288675-288931:-1:exon
so has part: feature:287973-288078:-1:exon
so has part: feature:286764-286909:-1:exon
so has part: feature:286319-286611:-1:exon
so has part: feature:285823-285964:-1:exon
so has part: feature:283731-285236:-1:exon
so has part: feature:283276-283371:-1:exon
so has part: feature:282675-282844:-1:exon
so has part: feature:282409-282573:-1:exon
so has part: feature:281995-282102:-1:exon
so has part: feature:281644-281871:-1:exon

XP_056357078.1
type: Protein
SIO_000068: ncbiprotein

position:281644:-1
position: 281644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293723:-1
position: 293723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293656-293723:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:291477-291620:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:290109-290263:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:289572-289695:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288675-288931:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:287973-288078:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:286764-286909:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:286319-286611:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:285823-285964:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:283731-285236:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:283276-283371:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:282675-282844:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:282409-282573:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:281995-282102:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:281644-281871:-1:exon

SEC13
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: SEC13
note: SEC13 homolog, nuclear pore and COPII coat complex component; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 294009..300342
location: region:294009-300342:1
so has part: feature:294009-300342:1:exon
subclass of: SO_0000010

130258081
type: Gene
SIO_000068: ncbigene

position:294009:1
position: 294009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300342:1
position: 300342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294009-300342:1:exon

SEC13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: SEC13
product: SEC13 homolog, nuclear pore and COPII coat complex component, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501105.1
SIO_010081: SEC13
subclass of: SO_0000673
so part of: SEC13
location: join(294009..294136,294658..294702,295614..295729,296141..296292,296839..296972,297730..297863,298351..298471,298987..299133,299497..300342)
location: region:294009-300342:1
so has part: feature:294009-294136:1:exon
so has part: feature:294658-294702:1:exon
so has part: feature:295614-295729:1:exon
so has part: feature:296141-296292:1:exon
so has part: feature:296839-296972:1:exon
so has part: feature:297730-297863:1:exon
so has part: feature:298351-298471:1:exon
so has part: feature:298987-299133:1:exon
so has part: feature:299497-300342:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:294009-294136:1:exon

position:294136:1
position: 294136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:294658-294702:1:exon

position:294658:1
position: 294658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294702:1
position: 294702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:295614-295729:1:exon

position:295614:1
position: 295614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295729:1
position: 295729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:296141-296292:1:exon

position:296141:1
position: 296141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296292:1
position: 296292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:296839-296972:1:exon

position:296839:1
position: 296839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296972:1
position: 296972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:297730-297863:1:exon

position:297730:1
position: 297730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297863:1
position: 297863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:298351-298471:1:exon

position:298351:1
position: 298351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298471:1
position: 298471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:298987-299133:1:exon

position:298987:1
position: 298987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299133:1
position: 299133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:299497-300342:1:exon

position:299497:1
position: 299497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SEC13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: SEC13
product: SEC13 homolog, nuclear pore and COPII coat complex component, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501107.1
SIO_010081: SEC13
subclass of: SO_0000673
so part of: SEC13
location: join(294052..294095,294170..294205,294658..294702,295614..295729,296141..296292,296839..296972,297730..297863,298351..298471,298987..299133,299497..300342)
location: region:294052-300342:1
so has part: feature:294052-294095:1:exon
so has part: feature:294170-294205:1:exon
so has part: feature:294658-294702:1:exon
so has part: feature:295614-295729:1:exon
so has part: feature:296141-296292:1:exon
so has part: feature:296839-296972:1:exon
so has part: feature:297730-297863:1:exon
so has part: feature:298351-298471:1:exon
so has part: feature:298987-299133:1:exon
so has part: feature:299497-300342:1:exon

position:294052:1
position: 294052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294052-294095:1:exon

position:294095:1
position: 294095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:294170-294205:1:exon

position:294170:1
position: 294170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294205:1
position: 294205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:294658-294702:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:295614-295729:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296141-296292:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:296839-296972:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:297730-297863:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:298351-298471:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:298987-299133:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:299497-300342:1:exon

SEC13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: SEC13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SEC13 homolog isoform X1
translation: MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTYEYTGHDSSVNSVCWAPHDYGLILACGSSDGAISLLSYTGDGQWEVKKISNAHTIGCNAVSWAPAVVPGSLIEQPSGQKPNYIKRFASGGCDNLVKIWKEEEGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNSWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGLWACISDVNKGQGGVSAVTEGQQNEQ
SIO_010081: SEC13
subclass of: SO_0000673
so part of: SEC13
location: join(294134..294136,294658..294702,295614..295729,296141..296292,296839..296972,297730..297863,298351..298471,298987..299133,299497..299607)
location: region:294134-299607:1
so has part: feature:294134-294136:1:exon
so has part: feature:294658-294702:1:exon
so has part: feature:295614-295729:1:exon
so has part: feature:296141-296292:1:exon
so has part: feature:296839-296972:1:exon
so has part: feature:297730-297863:1:exon
so has part: feature:298351-298471:1:exon
so has part: feature:298987-299133:1:exon
so has part: feature:299497-299607:1:exon

XP_056357080.1
type: Protein
SIO_000068: ncbiprotein

position:294134:1
position: 294134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299607:1
position: 299607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294134-294136:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:294658-294702:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:295614-295729:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296141-296292:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296839-296972:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:297730-297863:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:298351-298471:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:298987-299133:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:299497-299607:1:exon

SEC13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: SEC13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SEC13 homolog isoform X3
translation: MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTYEYTGHDSSVNSVCWAPHDYGLILACGSSDGAISLLSYTGDGQWEVKKISNAHTIGCNAVSWAPAVVPGSLIEQPSGQKPNYIKRFASGGCDNLVKIWKEEEGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNSWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGLWACISDVNKGQGGVSAVTEGQQNEQ
SIO_010081: SEC13
subclass of: SO_0000673
so part of: SEC13
location: join(294203..294205,294658..294702,295614..295729,296141..296292,296839..296972,297730..297863,298351..298471,298987..299133,299497..299607)
location: region:294203-299607:1
so has part: feature:294203-294205:1:exon
so has part: feature:294658-294702:1:exon
so has part: feature:295614-295729:1:exon
so has part: feature:296141-296292:1:exon
so has part: feature:296839-296972:1:exon
so has part: feature:297730-297863:1:exon
so has part: feature:298351-298471:1:exon
so has part: feature:298987-299133:1:exon
so has part: feature:299497-299607:1:exon

XP_056357082.1
type: Protein
SIO_000068: ncbiprotein

position:294203:1
position: 294203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294203-294205:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:294658-294702:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:295614-295729:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296141-296292:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296839-296972:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:297730-297863:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:298351-298471:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:298987-299133:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:299497-299607:1:exon

SEC13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: SEC13
product: SEC13 homolog, nuclear pore and COPII coat complex component, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501106.1
SIO_010081: SEC13
subclass of: SO_0000673
so part of: SEC13
location: join(294318..294368,294658..294702,295614..295729,296141..296292,296839..296972,297730..297863,298351..298471,298987..299133,299497..300342)
location: region:294318-300342:1
so has part: feature:294318-294368:1:exon
so has part: feature:294658-294702:1:exon
so has part: feature:295614-295729:1:exon
so has part: feature:296141-296292:1:exon
so has part: feature:296839-296972:1:exon
so has part: feature:297730-297863:1:exon
so has part: feature:298351-298471:1:exon
so has part: feature:298987-299133:1:exon
so has part: feature:299497-300342:1:exon

position:294318:1
position: 294318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294318-294368:1:exon

position:294368:1
position: 294368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:294658-294702:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:295614-295729:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296141-296292:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296839-296972:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:297730-297863:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:298351-298471:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:298987-299133:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:299497-300342:1:exon

SEC13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: SEC13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SEC13 homolog isoform X2
translation: MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTYEYTGHDSSVNSVCWAPHDYGLILACGSSDGAISLLSYTGDGQWEVKKISNAHTIGCNAVSWAPAVVPGSLIEQPSGQKPNYIKRFASGGCDNLVKIWKEEEGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNSWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGLWACISDVNKGQGGVSAVTEGQQNEQ
SIO_010081: SEC13
subclass of: SO_0000673
so part of: SEC13
location: join(294366..294368,294658..294702,295614..295729,296141..296292,296839..296972,297730..297863,298351..298471,298987..299133,299497..299607)
location: region:294366-299607:1
so has part: feature:294366-294368:1:exon
so has part: feature:294658-294702:1:exon
so has part: feature:295614-295729:1:exon
so has part: feature:296141-296292:1:exon
so has part: feature:296839-296972:1:exon
so has part: feature:297730-297863:1:exon
so has part: feature:298351-298471:1:exon
so has part: feature:298987-299133:1:exon
so has part: feature:299497-299607:1:exon

XP_056357081.1
type: Protein
SIO_000068: ncbiprotein

position:294366:1
position: 294366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294366-294368:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:294658-294702:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:295614-295729:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296141-296292:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296839-296972:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:297730-297863:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:298351-298471:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:298987-299133:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:299497-299607:1:exon

IRAK2
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: IRAK2
note: interleukin 1 receptor associated kinase 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(301239..316404)
location: region:301239-316404:-1
so has part: feature:301239-316404:-1:exon
subclass of: SO_0000010

130258100
type: Gene
SIO_000068: ncbigene

position:301239:-1
position: 301239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316404:-1
position: 316404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301239-316404:-1:exon

IRAK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: IRAK2
product: interleukin 1 receptor associated kinase 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501163.1
SIO_010081: IRAK2
subclass of: SO_0000673
so part of: IRAK2
location: complement(join(301239..303359,303747..304254,304420..304620,305651..305713,306383..306578,306924..307033,307292..307406,307788..307852,308279..308473,309885..309997,310687..310851,313499..313678,315986..316404))
location: region:301239-316404:-1
so has part: feature:315986-316404:-1:exon
so has part: feature:313499-313678:-1:exon
so has part: feature:310687-310851:-1:exon
so has part: feature:309885-309997:-1:exon
so has part: feature:308279-308473:-1:exon
so has part: feature:307788-307852:-1:exon
so has part: feature:307292-307406:-1:exon
so has part: feature:306924-307033:-1:exon
so has part: feature:306383-306578:-1:exon
so has part: feature:305651-305713:-1:exon
so has part: feature:304420-304620:-1:exon
so has part: feature:303747-304254:-1:exon
so has part: feature:301239-303359:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:315986-316404:-1:exon

position:315986:-1
position: 315986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:313499-313678:-1:exon

position:313499:-1
position: 313499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313678:-1
position: 313678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:310687-310851:-1:exon

position:310687:-1
position: 310687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310851:-1
position: 310851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:309885-309997:-1:exon

position:309885:-1
position: 309885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309997:-1
position: 309997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:308279-308473:-1:exon

position:308279:-1
position: 308279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308473:-1
position: 308473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:307788-307852:-1:exon

position:307788:-1
position: 307788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307852:-1
position: 307852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:307292-307406:-1:exon

position:307292:-1
position: 307292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307406:-1
position: 307406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:306924-307033:-1:exon

position:306924:-1
position: 306924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307033:-1
position: 307033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:306383-306578:-1:exon

position:306383:-1
position: 306383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306578:-1
position: 306578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:305651-305713:-1:exon

position:305651:-1
position: 305651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305713:-1
position: 305713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:304420-304620:-1:exon

position:304420:-1
position: 304420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304620:-1
position: 304620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:303747-304254:-1:exon

position:303747:-1
position: 303747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304254:-1
position: 304254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:301239-303359:-1:exon

position:303359:-1
position: 303359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IRAK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: IRAK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-1 receptor-associated kinase-like 2
translation: MALQPPPLALRAGSAPALYIHSMPAWVLEDFCQKMDCLSDYDWMRFASYVITDQTELRKIKCMEKTGISITRELMWWWGVRLATVQQLLDLLQGLQLYRAAQVILDWTSASNISSSEKEEPEPLKQIISALPMESKRREKENAISLLPSPDSSHLGALPAGISGAVSGGALYSLPAPPPPPRDLLNSLQSNPPVLSSVKPCSSSTPRQETMADLPSGSLLWTQREIANATNSFSDKNRICVGTFADIYKGQRNNMVFVIKRLKELECTSPSSTQRFFHTEVQICFRCCHINILQLLGFSVETGLHCLIYPYLPNGSLQNKLQCQDDSAPLTWEMRISISIGIVKAVEYLHNFGILHGNIRSSNVLLDENFTPKLGHSGLRLHSSGKKSEYAMMKTKVLQASLTYLPEDFVRHGQLTEKVDLFSCGVVLAEILTGIKALDEDRHPIYLKDMIADEIQIAKESSDSKGKNLEKLAAKEICCKYLDKKAGHLLEEVAVDFATAICLCLKKKNSNIAEVLEIMEMAENKLKELYICGSSTSGFSMNTPEETDDETASLSVDMPSAVGSKEESSPAATLGSGSPCVPVVAAPDSCGLYVSRVPCESDESSSFPWSPPEKPTEELPGHSCGSAEKVPACDDRVKEGKPAALQERSLVCPAAEGSLQTAAAAQGTCPQESTDLDSSCAPQAIARETSWNIQINDQKKKLMENILLYEEDKLNSSELFES
SIO_010081: IRAK2
subclass of: SO_0000673
so part of: IRAK2
location: complement(join(303241..303359,303747..304254,304420..304620,305651..305713,306383..306578,306924..307033,307292..307406,307788..307852,308279..308473,309885..309997,310687..310851,313499..313678,315986..316124))
location: region:303241-316124:-1
so has part: feature:315986-316124:-1:exon
so has part: feature:313499-313678:-1:exon
so has part: feature:310687-310851:-1:exon
so has part: feature:309885-309997:-1:exon
so has part: feature:308279-308473:-1:exon
so has part: feature:307788-307852:-1:exon
so has part: feature:307292-307406:-1:exon
so has part: feature:306924-307033:-1:exon
so has part: feature:306383-306578:-1:exon
so has part: feature:305651-305713:-1:exon
so has part: feature:304420-304620:-1:exon
so has part: feature:303747-304254:-1:exon
so has part: feature:303241-303359:-1:exon

XP_056357138.1
type: Protein
SIO_000068: ncbiprotein

position:303241:-1
position: 303241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316124:-1
position: 316124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315986-316124:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:313499-313678:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:310687-310851:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:309885-309997:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:308279-308473:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:307788-307852:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:307292-307406:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:306924-307033:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:306383-306578:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:305651-305713:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:304420-304620:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:303747-304254:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:303241-303359:-1:exon

LOC130258102
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: LOC130258102
note: uncharacterized LOC130258102; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 316891..320177
location: region:316891-320177:1
so has part: feature:316891-320177:1:exon
subclass of: SO_0000011

130258102
type: Gene
SIO_000068: ncbigene

position:316891:1
position: 316891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320177:1
position: 320177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316891-320177:1:exon

LOC130258102
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2939378
nc RNA class: lncRNA
gene: LOC130258102
product: uncharacterized LOC130258102
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008841436.1
SIO_010081: LOC130258102
subclass of: SO_0000673
so part of: LOC130258102
location: join(316891..318603,318642..320177)
location: region:316891-320177:1
so has part: feature:316891-318603:1:exon
so has part: feature:318642-320177:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:316891-318603:1:exon

position:318603:1
position: 318603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:318642-320177:1:exon

position:318642:1
position: 318642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC130258101
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: LOC130258101
note: von Hippel-Lindau disease tumor suppressor-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(319163..321705)
location: region:319163-321705:-1
so has part: feature:319163-321705:-1:exon
subclass of: SO_0000010

130258101
type: Gene
SIO_000068: ncbigene

position:319163:-1
position: 319163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321705:-1
position: 321705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319163-321705:-1:exon

LOC130258101
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: LOC130258101
product: von Hippel-Lindau disease tumor suppressor-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501164.1
SIO_010081: LOC130258101
subclass of: SO_0000673
so part of: LOC130258101
location: complement(join(319163..320564,320933..321043,321417..321705))
location: region:319163-321705:-1
so has part: feature:321417-321705:-1:exon
so has part: feature:320933-321043:-1:exon
so has part: feature:319163-320564:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:321417-321705:-1:exon

position:321417:-1
position: 321417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:320933-321043:-1:exon

position:320933:-1
position: 320933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321043:-1
position: 321043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:319163-320564:-1:exon

position:320564:-1
position: 320564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC130258101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: LOC130258101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: von Hippel-Lindau disease tumor suppressor-like
translation: MSPPGPERPGEARPVLRSVNTRELSEVVFNNHSPRCVLPVWLDFEGQPRRYPVLQPRSGRVMHSYRGHLWLFRDAGTNDGLLVNQQELFVAAPNVTKADITLPVFTLKERCLQVVRSLVSPVDYRKLDIVQSLYEELEDHPDIWKDLKRLSLERNEALRNKAMEKHDDSLQTPQ
SIO_010081: LOC130258101
subclass of: SO_0000673
so part of: LOC130258101
location: complement(join(320350..320564,320933..321043,321417..321615))
location: region:320350-321615:-1
so has part: feature:321417-321615:-1:exon
so has part: feature:320933-321043:-1:exon
so has part: feature:320350-320564:-1:exon

XP_056357139.1
type: Protein
SIO_000068: ncbiprotein

position:320350:-1
position: 320350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321615:-1
position: 321615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321417-321615:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:320933-321043:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:320350-320564:-1:exon

THUMPD3
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: THUMPD3
note: THUMP domain containing 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(322221..328326)
location: region:322221-328326:-1
so has part: feature:322221-328326:-1:exon
subclass of: SO_0000010

130258104
type: Gene
SIO_000068: ncbigene

position:322221:-1
position: 322221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328326:-1
position: 328326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322221-328326:-1:exon

THUMPD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: THUMPD3
product: THUMP domain containing 3, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501165.1
SIO_010081: THUMPD3
subclass of: SO_0000673
so part of: THUMPD3
location: complement(join(322221..323633,323841..323964,324138..324248,324434..324549,324914..324983,325402..325532,326291..326779,327272..327349,328000..328326))
location: region:322221-328326:-1
so has part: feature:328000-328326:-1:exon
so has part: feature:327272-327349:-1:exon
so has part: feature:326291-326779:-1:exon
so has part: feature:325402-325532:-1:exon
so has part: feature:324914-324983:-1:exon
so has part: feature:324434-324549:-1:exon
so has part: feature:324138-324248:-1:exon
so has part: feature:323841-323964:-1:exon
so has part: feature:322221-323633:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:328000-328326:-1:exon

position:328000:-1
position: 328000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:327272-327349:-1:exon

position:327272:-1
position: 327272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327349:-1
position: 327349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:326291-326779:-1:exon

position:326291:-1
position: 326291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326779:-1
position: 326779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:325402-325532:-1:exon

position:325402:-1
position: 325402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325532:-1
position: 325532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:324914-324983:-1:exon

position:324914:-1
position: 324914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324983:-1
position: 324983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:324434-324549:-1:exon

position:324434:-1
position: 324434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324549:-1
position: 324549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:324138-324248:-1:exon

position:324138:-1
position: 324138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324248:-1
position: 324248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:323841-323964:-1:exon

position:323841:-1
position: 323841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323964:-1
position: 323964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:322221-323633:-1:exon

position:323633:-1
position: 323633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

THUMPD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: THUMPD3
product: THUMP domain containing 3, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501166.1
SIO_010081: THUMPD3
subclass of: SO_0000673
so part of: THUMPD3
location: complement(join(322221..323633,323841..323964,324138..324245,324434..324549,324914..324983,325402..325532,326291..326779,327272..327349,328000..328317))
location: region:322221-328317:-1
so has part: feature:328000-328317:-1:exon
so has part: feature:327272-327349:-1:exon
so has part: feature:326291-326779:-1:exon
so has part: feature:325402-325532:-1:exon
so has part: feature:324914-324983:-1:exon
so has part: feature:324434-324549:-1:exon
so has part: feature:324138-324245:-1:exon
so has part: feature:323841-323964:-1:exon
so has part: feature:322221-323633:-1:exon

position:328317:-1
position: 328317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328000-328317:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:327272-327349:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:326291-326779:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:325402-325532:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:324914-324983:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:324434-324549:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:324138-324245:-1:exon

position:324245:-1
position: 324245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:323841-323964:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:322221-323633:-1:exon

THUMPD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: THUMPD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (guanine(6)-N2)-methyltransferase THUMP3 isoform X2
translation: MAEAAGDAGPGPELAAVIGATVPTGFEHTAAEEVREKLGSASRISRDRGKIYFEVPARSLPQVHRLRSVDNLFVVVQEFKDYQFEENKEDALKHLEDLVKKLPWTDPLKVWELNNSLKKKKTKRKKHNLQGPASREKLSGAGEEGGADQSTTDEQEDCAQNPVETETPQGVPSRNGLEEEEDNEADVKAGGQEGSGASEAGAGERVLRFRVTCSRAGDRHSFTSNEAARDFGGAVQEHFQWKADMTNFDVEVLLNIHNNEVVVGIALTEESLHRRNITHFGPTTLRSTLAYGMLRLCDPQPTDIIVDPMCGTGAIPIEGAAEWPNCYHIAGDNSPQAVKRAANNICSLLRKNESKDSAALGVPLDVIQWDICNLPLRTGSVDIVVTDMPFGKRIGSKKKNWDLYPACLMEMGRICTPGTGRAVLLTQDKKCFAKALSRVGHIWRRAQTVWVNVGGLHVAVYLLRRTAERAEERAHC
SIO_010081: THUMPD3
subclass of: SO_0000673
so part of: THUMPD3
location: complement(join(323505..323633,323841..323964,324138..324245,324434..324549,324914..324983,325402..325532,326291..326779,327272..327349,328000..328185))
location: region:323505-328185:-1
so has part: feature:328000-328185:-1:exon
so has part: feature:327272-327349:-1:exon
so has part: feature:326291-326779:-1:exon
so has part: feature:325402-325532:-1:exon
so has part: feature:324914-324983:-1:exon
so has part: feature:324434-324549:-1:exon
so has part: feature:324138-324245:-1:exon
so has part: feature:323841-323964:-1:exon
so has part: feature:323505-323633:-1:exon

XP_056357141.1
type: Protein
SIO_000068: ncbiprotein

position:323505:-1
position: 323505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328185:-1
position: 328185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328000-328185:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:327272-327349:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:326291-326779:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:325402-325532:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:324914-324983:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:324434-324549:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:324138-324245:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:323841-323964:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:323505-323633:-1:exon

THUMPD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: THUMPD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (guanine(6)-N2)-methyltransferase THUMP3 isoform X1
translation: MAEAAGDAGPGPELAAVIGATVPTGFEHTAAEEVREKLGSASRISRDRGKIYFEVPARSLPQVHRLRSVDNLFVVVQEFKDYQFEENKEDALKHLEDLVKKLPWTDPLKVWELNNSLKKKKTKRKKHNLQGPASREKLSGAGEEGGADQSTTDEQEDCAQNPVETETPQGVPSRNGLEEEEDNEADVKAGGQEGSGASEAGAGERVLRFRVTCSRAGDRHSFTSNEAARDFGGAVQEHFQWKADMTNFDVEVLLNIHNNEVVVGIALTEESLHRRNITHFGPTTLRSTLAYGMLRLCDPQPTDIIVDPMCGTGAIPIEGAAEWPNCYHIAGDNSPQAVKRAANNICSLLRKNESKDSSAALGVPLDVIQWDICNLPLRTGSVDIVVTDMPFGKRIGSKKKNWDLYPACLMEMGRICTPGTGRAVLLTQDKKCFAKALSRVGHIWRRAQTVWVNVGGLHVAVYLLRRTAERAEERAHC
SIO_010081: THUMPD3
subclass of: SO_0000673
so part of: THUMPD3
location: complement(join(323505..323633,323841..323964,324138..324248,324434..324549,324914..324983,325402..325532,326291..326779,327272..327349,328000..328185))
location: region:323505-328185:-1
so has part: feature:328000-328185:-1:exon
so has part: feature:327272-327349:-1:exon
so has part: feature:326291-326779:-1:exon
so has part: feature:325402-325532:-1:exon
so has part: feature:324914-324983:-1:exon
so has part: feature:324434-324549:-1:exon
so has part: feature:324138-324248:-1:exon
so has part: feature:323841-323964:-1:exon
so has part: feature:323505-323633:-1:exon

XP_056357140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:328000-328185:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:327272-327349:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:326291-326779:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:325402-325532:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:324914-324983:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:324434-324549:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:324138-324248:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:323841-323964:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:323505-323633:-1:exon

SRGAP3
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: SRGAP3
note: SLIT-ROBO Rho GTPase activating protein 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 344876..411147
location: region:344876-411147:1
so has part: feature:344876-411147:1:exon
subclass of: SO_0000010

130258374
type: Gene
SIO_000068: ncbigene

position:344876:1
position: 344876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411147:1
position: 411147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344876-411147:1:exon

SRGAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: SRGAP3
product: SLIT-ROBO Rho GTPase activating protein 3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501688.1
SIO_010081: SRGAP3
subclass of: SO_0000673
so part of: SRGAP3
location: join(344876..345137,376751..376943,379869..380031,384064..384126,387886..388071,389073..389201,391565..391786,392204..392305,392515..392712,394042..394126,394638..394665,396009..396111,397917..397977,398609..398686,399655..399789,401961..402066,403534..403761,405499..405578,406573..406753,407293..407442,407886..408213,408499..411147)
location: region:344876-411147:1
so has part: feature:344876-345137:1:exon
so has part: feature:376751-376943:1:exon
so has part: feature:379869-380031:1:exon
so has part: feature:384064-384126:1:exon
so has part: feature:387886-388071:1:exon
so has part: feature:389073-389201:1:exon
so has part: feature:391565-391786:1:exon
so has part: feature:392204-392305:1:exon
so has part: feature:392515-392712:1:exon
so has part: feature:394042-394126:1:exon
so has part: feature:394638-394665:1:exon
so has part: feature:396009-396111:1:exon
so has part: feature:397917-397977:1:exon
so has part: feature:398609-398686:1:exon
so has part: feature:399655-399789:1:exon
so has part: feature:401961-402066:1:exon
so has part: feature:403534-403761:1:exon
so has part: feature:405499-405578:1:exon
so has part: feature:406573-406753:1:exon
so has part: feature:407293-407442:1:exon
so has part: feature:407886-408213:1:exon
so has part: feature:408499-411147:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:344876-345137:1:exon

position:345137:1
position: 345137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:376751-376943:1:exon

position:376751:1
position: 376751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376943:1
position: 376943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:379869-380031:1:exon

position:379869:1
position: 379869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380031:1
position: 380031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:384064-384126:1:exon

position:384064:1
position: 384064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384126:1
position: 384126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:387886-388071:1:exon

position:387886:1
position: 387886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388071:1
position: 388071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:389073-389201:1:exon

position:389073:1
position: 389073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389201:1
position: 389201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:391565-391786:1:exon

position:391565:1
position: 391565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391786:1
position: 391786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:392204-392305:1:exon

position:392204:1
position: 392204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392305:1
position: 392305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:392515-392712:1:exon

position:392515:1
position: 392515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392712:1
position: 392712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:394042-394126:1:exon

position:394042:1
position: 394042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394126:1
position: 394126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:394638-394665:1:exon

position:394638:1
position: 394638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394665:1
position: 394665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:396009-396111:1:exon

position:396009:1
position: 396009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396111:1
position: 396111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:397917-397977:1:exon

position:397917:1
position: 397917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397977:1
position: 397977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:398609-398686:1:exon

position:398609:1
position: 398609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398686:1
position: 398686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:399655-399789:1:exon

position:399655:1
position: 399655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399789:1
position: 399789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:401961-402066:1:exon

position:401961:1
position: 401961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402066:1
position: 402066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:403534-403761:1:exon

position:403534:1
position: 403534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403761:1
position: 403761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:405499-405578:1:exon

position:405499:1
position: 405499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405578:1
position: 405578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:406573-406753:1:exon

position:406573:1
position: 406573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406753:1
position: 406753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:407293-407442:1:exon

position:407293:1
position: 407293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407442:1
position: 407442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:407886-408213:1:exon

position:407886:1
position: 407886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408213:1
position: 408213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:408499-411147:1:exon

position:408499:1
position: 408499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SRGAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: SRGAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SLIT-ROBO Rho GTPase-activating protein 3
translation: MSAPGKFKKDKEIIADYEAQVKEIRSQLVEQLKCLEQQSESRLQLLQDLQEFFRRKAEIELEYSRSLEKLAERFSSKIRSSREHQLKKDQQLLSPVNCWYLVLTQTRRESRDHATLNDIFTNNVIVRLSQISEDVIRLFKKSKEIGLQMHEELQKVTNELYTVMKTYHMYHAESISAESKLKEAEKQEEKQFNKAGDMSVNLLRHEERPQRRSSVKKIEKMKEKRQAKYSENKLKCTKARNDYLLNLAATNAAVSKYYIHDVSDLIDCCDLGFHASLARTLRTYLSAEYNLESSRHEGLDALEGAVDALDARSDKHSLMDMCNQVFCPPLKFEFQPHMGDEVCQVSAQQPVQTELLMRYHQLQSRLATLKIENEEVRKTLDATMQTLQDMLTVEDFDVSDAFQHSRSTESVRSAASETYMSKINIAKRRANQQETEMFYFTKFKEYLNGSNLITKLQAKHDLLKQTLGEGERAECGTTRPPCLPPKPQKMRRPRPLSVYNHKLFNGNMETFIKDSGQAIPLVVESCIRYINLYGLQQQGIFRVPGSQVEVNDIKNSFERGEDPLADDQNERDINSVAGVLKLYFRGLENPLFPKERFQDLISTIKMENPAERVHQIQQIIVTLPRAVIVVMRYLFAFLNHLSQYSDENMMDPYNLAICFGPTLMHIPDGQDPVSCQAHVNELIKTIITHHEGIFPSPRELEGPVYEKCMAGGEEYCDSPHSEPGTIDEVDHDNGTEPHTSDDEVEQIEAIAKFDYVGRSPRELSFKKGASLLLYHRASEDWWEGRHNGVDGLIPHQYIVVQDMDDAFSDSLSQKADSEASSGPLLDDKASSKNDIQSPTDHIMDYGFGGVMGRVRLRSDGAAIPRRRSGGDTHSPPRGMGPGMDTPPRAAACPSSPHKIPLNRGRMESPEKRRMATFGSVGSINFPDRKALADSHPLRSTCGSTRHSSLGDQKSLEAEALAEDIEKTMSTALNELRELERQNTAKQAPDVVLDTLEPLKNPALGAASSEPASPLHTILIRDPEAALRRSSSSTCEMMTTFKPALSARLAGAQLRPPPVRAPRPAVQQRSSSSSSSGLGSPAVTPTEKLFPAGSADKSGTM
SIO_010081: SRGAP3
subclass of: SO_0000673
so part of: SRGAP3
location: join(345071..345137,376751..376943,379869..380031,384064..384126,387886..388071,389073..389201,391565..391786,392204..392305,392515..392712,394042..394126,394638..394665,396009..396111,397917..397977,398609..398686,399655..399789,401961..402066,403534..403761,405499..405578,406573..406753,407293..407442,407886..408213,408499..408915)
location: region:345071-408915:1
so has part: feature:345071-345137:1:exon
so has part: feature:376751-376943:1:exon
so has part: feature:379869-380031:1:exon
so has part: feature:384064-384126:1:exon
so has part: feature:387886-388071:1:exon
so has part: feature:389073-389201:1:exon
so has part: feature:391565-391786:1:exon
so has part: feature:392204-392305:1:exon
so has part: feature:392515-392712:1:exon
so has part: feature:394042-394126:1:exon
so has part: feature:394638-394665:1:exon
so has part: feature:396009-396111:1:exon
so has part: feature:397917-397977:1:exon
so has part: feature:398609-398686:1:exon
so has part: feature:399655-399789:1:exon
so has part: feature:401961-402066:1:exon
so has part: feature:403534-403761:1:exon
so has part: feature:405499-405578:1:exon
so has part: feature:406573-406753:1:exon
so has part: feature:407293-407442:1:exon
so has part: feature:407886-408213:1:exon
so has part: feature:408499-408915:1:exon

XP_056357663.1
type: Protein
SIO_000068: ncbiprotein

position:345071:1
position: 345071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408915:1
position: 408915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345071-345137:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376751-376943:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:379869-380031:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384064-384126:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:387886-388071:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389073-389201:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:391565-391786:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:392204-392305:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:392515-392712:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:394042-394126:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:394638-394665:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:396009-396111:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:397917-397977:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:398609-398686:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:399655-399789:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:401961-402066:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:403534-403761:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:405499-405578:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:406573-406753:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:407293-407442:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:407886-408213:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:408499-408915:1:exon

RAD18
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: RAD18
note: RAD18 E3 ubiquitin protein ligase; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 423682..453268
location: region:423682-453268:1
so has part: feature:423682-453268:1:exon
subclass of: SO_0000010

130258375
type: Gene
SIO_000068: ncbigene

position:423682:1
position: 423682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453268:1
position: 453268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423682-453268:1:exon

RAD18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: RAD18
product: RAD18 E3 ubiquitin protein ligase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 long SRA reads, 3 Proteins
transcript id: XM_056501690.1
SIO_010081: RAD18
subclass of: SO_0000673
so part of: RAD18
location: join(423682..423943,424056..424137,425976..426037,426890..426960,430650..430954,432129..432228,434404..434588,435986..436065,436666..436726,438882..439016,441819..441963,447786..447848,450644..453268)
location: region:423682-453268:1
so has part: feature:423682-423943:1:exon
so has part: feature:424056-424137:1:exon
so has part: feature:425976-426037:1:exon
so has part: feature:426890-426960:1:exon
so has part: feature:430650-430954:1:exon
so has part: feature:432129-432228:1:exon
so has part: feature:434404-434588:1:exon
so has part: feature:435986-436065:1:exon
so has part: feature:436666-436726:1:exon
so has part: feature:438882-439016:1:exon
so has part: feature:441819-441963:1:exon
so has part: feature:447786-447848:1:exon
so has part: feature:450644-453268:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:423682-423943:1:exon

position:423943:1
position: 423943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:424056-424137:1:exon

position:424056:1
position: 424056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424137:1
position: 424137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:425976-426037:1:exon

position:425976:1
position: 425976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426037:1
position: 426037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:426890-426960:1:exon

position:426890:1
position: 426890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426960:1
position: 426960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:430650-430954:1:exon

position:430650:1
position: 430650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430954:1
position: 430954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:432129-432228:1:exon

position:432129:1
position: 432129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432228:1
position: 432228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:434404-434588:1:exon

position:434404:1
position: 434404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434588:1
position: 434588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:435986-436065:1:exon

position:435986:1
position: 435986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436065:1
position: 436065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:436666-436726:1:exon

position:436666:1
position: 436666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436726:1
position: 436726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:438882-439016:1:exon

position:438882:1
position: 438882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439016:1
position: 439016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:441819-441963:1:exon

position:441819:1
position: 441819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441963:1
position: 441963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:447786-447848:1:exon

position:447786:1
position: 447786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447848:1
position: 447848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:450644-453268:1:exon

position:450644:1
position: 450644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAD18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: RAD18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RAD18
translation: MALALPPLEPPWPPSLAPLKAVDDLLRCGICFDYFSIAVVIPQCSHSYCSLCIRKFLSYKTQCPTCCVAVSESDLRNNRLLDDLVKSFNSARQQLLQLVLDAPSPAAPGHCSPAQPAQGPGTHSLLRKDKVCTSLAGLPGAALESLSTEGHHDLHSPSAEPGAADSKVGSQEVPGSTGNQEKPSTSVVQGDCKVECPVCGVAIPEQYINKHLDSCLSREEKKDSLRSSAQRRKLMSKVVYNLLSDRDLKKKLKEHGLSTSGTRQQLIKRHQEFVHMYNAQCDSLSPKSVAEVVKELEKNEKIRVQLECNNKSGENSLTFTKDQTEEEIDEIHAKYRNKHGREFKFLVDEVNKRWKKTGERKAESAGSKEEVAVKELPAATEHHTAVVPGRAQTLQSEIPDGQRSESHCLKEYQRSASPEFSLSSGSSSSTNSDILADVEGSETCSASSDSSVPLAGSRRKLRRRVPREEEEEEEGAWMPRGKRKRS
SIO_010081: RAD18
subclass of: SO_0000673
so part of: RAD18
location: join(423884..423943,424056..424137,425976..426037,426890..426960,430650..430954,432129..432228,434404..434588,435986..436065,436666..436726,438882..439016,441819..441963,447786..447848,450644..450755)
location: region:423884-450755:1
so has part: feature:423884-423943:1:exon
so has part: feature:424056-424137:1:exon
so has part: feature:425976-426037:1:exon
so has part: feature:426890-426960:1:exon
so has part: feature:430650-430954:1:exon
so has part: feature:432129-432228:1:exon
so has part: feature:434404-434588:1:exon
so has part: feature:435986-436065:1:exon
so has part: feature:436666-436726:1:exon
so has part: feature:438882-439016:1:exon
so has part: feature:441819-441963:1:exon
so has part: feature:447786-447848:1:exon
so has part: feature:450644-450755:1:exon

XP_056357665.1
type: Protein
SIO_000068: ncbiprotein

position:423884:1
position: 423884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450755:1
position: 450755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423884-423943:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:424056-424137:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:425976-426037:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:426890-426960:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:430650-430954:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:432129-432228:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:434404-434588:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:435986-436065:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:436666-436726:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:438882-439016:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:441819-441963:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:447786-447848:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:450644-450755:1:exon

LOC130258376
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: LOC130258376
note: uncharacterized LOC130258376; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(447855..450274)
location: region:447855-450274:-1
so has part: feature:447855-450274:-1:exon
subclass of: SO_0000010

130258376
type: Gene
SIO_000068: ncbigene

position:447855:-1
position: 447855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450274:-1
position: 450274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447855-450274:-1:exon

LOC130258376
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: LOC130258376
product: uncharacterized LOC130258376
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read
transcript id: XM_056501691.1
SIO_010081: LOC130258376
subclass of: SO_0000673
so part of: LOC130258376
location: complement(join(447855..449822,449960..450274))
location: region:447855-450274:-1
so has part: feature:449960-450274:-1:exon
so has part: feature:447855-449822:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:449960-450274:-1:exon

position:449960:-1
position: 449960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:447855-449822:-1:exon

position:449822:-1
position: 449822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC130258376
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: LOC130258376
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC130258376
translation: MSVCWGQGTGVCEGPRTGDRVCECPRTGDRVCEWPRTGDRVCEGPRTGDRVCEGPRTGDRVCELPRTGDRVCEGPRTGDRVCEWPRTGDRVCEGPRTGDRVCEGPRTATVLHRSTESRTLMLTRVTGDGNHGMAGVGRQLPDPLIPPLPWQGHLPAPQGAPGPVQPGLDTSKDGDRNISVFPFEEGDSTTDHPTALSLKEHNASPPVPRAQFGTQGKAATPRLSPQLRTSPGRDQTSGCLSEKAVWGTASRMRGWSPQRSAWGLQPCQALSSFMDKVFSTENPTTALFLVTVNFEEKTLKLAVCK
SIO_010081: LOC130258376
subclass of: SO_0000673
so part of: LOC130258376
location: complement(join(448924..449822,449960..449978))
location: region:448924-449978:-1
so has part: feature:449960-449978:-1:exon
so has part: feature:448924-449822:-1:exon

XP_056357666.1
type: Protein
SIO_000068: ncbiprotein

position:448924:-1
position: 448924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449978:-1
position: 449978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449960-449978:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:448924-449822:-1:exon

OXTR
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: OXTR
note: oxytocin receptor; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 460792..467863
location: region:460792-467863:1
so has part: feature:460792-467863:1:exon
subclass of: SO_0000010

130258229
type: Gene
SIO_000068: ncbigene

position:460792:1
position: 460792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467863:1
position: 467863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460792-467863:1:exon

OXTR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: OXTR
product: oxytocin receptor
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501411.1
SIO_010081: OXTR
subclass of: SO_0000673
so part of: OXTR
location: join(460792..462290,466604..467863)
location: region:460792-467863:1
so has part: feature:460792-462290:1:exon
so has part: feature:466604-467863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:460792-462290:1:exon

position:462290:1
position: 462290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:466604-467863:1:exon

position:466604:1
position: 466604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OXTR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: OXTR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxytocin receptor
translation: MEKLYLAGSSTWTINSSLGNGSLRLENLSAGRNSSADPLKRNEDMAKVEVTVLCLILFLALTGNLCVLLAIHTTRHKHSRMYFFMKHLSIADLVVAIFQVLPQLIWDITFRFYGPDFLCRLIKYLQVVGMFASTYMLLLMSLDRCLAICQPLRSLHRRADRVSVLLTWLLCLLVSIPQIHIFSLRDVGNGVYDCWADFIQPWGPKAYVTWITLMVYIIPVLMLSICYGLISFKIWQNVKLKTAQGPSAALGSGSRGGMVFARVSSTRLISKAKIRTVKMTFIIVLAFIVCWTPFFFVQMWSVWDTNAPQEASPFIIAMLLASLNSCCNPWIYMLYTGHLFHDLMRRFLCCSARYLKSRPACELSKKSNSSSLALSCRSPSQRSFVQPPPT
SIO_010081: OXTR
subclass of: SO_0000673
so part of: OXTR
location: join(461360..462290,466604..466845)
location: region:461360-466845:1
so has part: feature:461360-462290:1:exon
so has part: feature:466604-466845:1:exon

XP_056357386.1
type: Protein
SIO_000068: ncbiprotein

position:461360:1
position: 461360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466845:1
position: 466845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461360-462290:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:466604-466845:1:exon

CAV3
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: CAV3
note: caveolin 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(470090..475432)
location: region:470090-475432:-1
so has part: feature:470090-475432:-1:exon
subclass of: SO_0000010

130258305
type: Gene
SIO_000068: ncbigene

position:470090:-1
position: 470090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475432:-1
position: 475432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470090-475432:-1:exon

CAV3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: CAV3
product: caveolin 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 long SRA reads, 20 Proteins
transcript id: XM_056501557.1
SIO_010081: CAV3
subclass of: SO_0000673
so part of: CAV3
location: complement(join(470090..472873,475269..475432))
location: region:470090-475432:-1
so has part: feature:475269-475432:-1:exon
so has part: feature:470090-472873:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:475269-475432:-1:exon

position:475269:-1
position: 475269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:470090-472873:-1:exon

position:472873:-1
position: 472873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CAV3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: CAV3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caveolin-3
translation: MAEHSELQQRILSNDLHTKEIDLVNRDPKHINEDVVKVDFEDVIAEPVGTYSFDGVWKSSYTTFTVSKYWCYRLLSALLGIPLAVLWGFLFALISFCHIWAVVPCIKSYLIEIQCVSRIYSLCIHTFCDPLFEALSKICSNIRVAVRREI
SIO_010081: CAV3
subclass of: SO_0000673
so part of: CAV3
location: complement(join(472532..472873,475269..475379))
location: region:472532-475379:-1
so has part: feature:475269-475379:-1:exon
so has part: feature:472532-472873:-1:exon

XP_056357532.1
type: Protein
SIO_000068: ncbiprotein

position:472532:-1
position: 472532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475379:-1
position: 475379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475269-475379:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:472532-472873:-1:exon

LMCD1
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: LMCD1
note: LIM and cysteine rich domains 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(499745..519159)
location: region:499745-519159:-1
so has part: feature:499745-519159:-1:exon
subclass of: SO_0000010

130258422
type: Gene
SIO_000068: ncbigene

position:499745:-1
position: 499745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519159:-1
position: 519159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499745-519159:-1:exon

LMCD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: LMCD1
product: LIM and cysteine rich domains 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501763.1
SIO_010081: LMCD1
subclass of: SO_0000673
so part of: LMCD1
location: complement(join(499745..500597,501398..501613,504939..505271,508844..509099,510179..510249,519112..519159))
location: region:499745-519159:-1
so has part: feature:519112-519159:-1:exon
so has part: feature:510179-510249:-1:exon
so has part: feature:508844-509099:-1:exon
so has part: feature:504939-505271:-1:exon
so has part: feature:501398-501613:-1:exon
so has part: feature:499745-500597:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:519112-519159:-1:exon

position:519112:-1
position: 519112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:510179-510249:-1:exon

position:510179:-1
position: 510179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510249:-1
position: 510249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:508844-509099:-1:exon

position:508844:-1
position: 508844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509099:-1
position: 509099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:504939-505271:-1:exon

position:504939:-1
position: 504939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505271:-1
position: 505271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:501398-501613:-1:exon

position:501398:-1
position: 501398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501613:-1
position: 501613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:499745-500597:-1:exon

position:500597:-1
position: 500597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LMCD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: LMCD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM and cysteine-rich domains protein 1
translation: MSGRGVPCLRCPGLCTGFEPHSWRKVCRACRCGQEEHGPGPQLDDDRRVGRLLAGSPHSALTARPPGGHGPRVYKRNRMIVTNPNVSGKDPTFDTVTYEWAPPGLTQKLAMQYMELLPPELQPVAGTEGALWRRRRLARQLPLHDQDPAQCRGLAEAERPLMERFVSAYKAEALGVGEVALPGQAGALQEGKRREPSAEPGTAPRPHNGSLESAAGAGHYLCAACQQPVAPDAPAVFAARAGYSRQWHPRCFVCCRCAEPLVDLIYFWGSGAAWCGRHYCESLRPRCAGCDEIIFSEDYQQVEGLAWHNKHFACLECETLLTGKPFTLANASLLCPGCGQSRA
SIO_010081: LMCD1
subclass of: SO_0000673
so part of: LMCD1
location: complement(join(500442..500597,501398..501613,504939..505271,508844..509099,510179..510249))
location: region:500442-510249:-1
so has part: feature:510179-510249:-1:exon
so has part: feature:508844-509099:-1:exon
so has part: feature:504939-505271:-1:exon
so has part: feature:501398-501613:-1:exon
so has part: feature:500442-500597:-1:exon

XP_056357738.1
type: Protein
SIO_000068: ncbiprotein

position:500442:-1
position: 500442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510179-510249:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:508844-509099:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:504939-505271:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:501398-501613:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:500442-500597:-1:exon

LOC130258423
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: LOC130258423
note: uncharacterized LOC130258423; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(505278..505781)
location: region:505278-505781:-1
so has part: feature:505278-505781:-1:exon
subclass of: SO_0000011

130258423
type: Gene
SIO_000068: ncbigene

position:505278:-1
position: 505278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505781:-1
position: 505781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505278-505781:-1:exon

LOC130258423
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2939378
nc RNA class: lncRNA
gene: LOC130258423
product: uncharacterized LOC130258423
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008841506.1
SIO_010081: LOC130258423
subclass of: SO_0000673
so part of: LOC130258423
location: complement(join(505278..505380,505605..505627,505733..505781))
location: region:505278-505781:-1
so has part: feature:505733-505781:-1:exon
so has part: feature:505605-505627:-1:exon
so has part: feature:505278-505380:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:505733-505781:-1:exon

position:505733:-1
position: 505733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:505605-505627:-1:exon

position:505605:-1
position: 505605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505627:-1
position: 505627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:505278-505380:-1:exon

position:505380:-1
position: 505380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GRM7
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: GRM7
note: glutamate metabotropic receptor 7; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(629858..814607)
location: region:629858-814607:-1
so has part: feature:629858-814607:-1:exon
subclass of: SO_0000010

130258461
type: Gene
SIO_000068: ncbigene

position:629858:-1
position: 629858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:814607:-1
position: 814607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:629858-814607:-1:exon

GRM7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: GRM7
product: glutamate metabotropic receptor 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 64 long SRA reads, 27 Proteins
transcript id: XM_056501854.1
SIO_010081: GRM7
subclass of: SO_0000673
so part of: GRM7
location: complement(join(629858..631556,647430..647676,665879..666814,679507..679646,684518..684718,689812..689952,706903..707057,708270..708411,739559..739775,814014..814607))
location: region:629858-814607:-1
so has part: feature:814014-814607:-1:exon
so has part: feature:739559-739775:-1:exon
so has part: feature:708270-708411:-1:exon
so has part: feature:706903-707057:-1:exon
so has part: feature:689812-689952:-1:exon
so has part: feature:684518-684718:-1:exon
so has part: feature:679507-679646:-1:exon
so has part: feature:665879-666814:-1:exon
so has part: feature:647430-647676:-1:exon
so has part: feature:629858-631556:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:814014-814607:-1:exon

position:814014:-1
position: 814014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:739559-739775:-1:exon

position:739559:-1
position: 739559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739775:-1
position: 739775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:708270-708411:-1:exon

position:708270:-1
position: 708270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708411:-1
position: 708411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:706903-707057:-1:exon

position:706903:-1
position: 706903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707057:-1
position: 707057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:689812-689952:-1:exon

position:689812:-1
position: 689812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689952:-1
position: 689952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:684518-684718:-1:exon

position:684518:-1
position: 684518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684718:-1
position: 684718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:679507-679646:-1:exon

position:679507:-1
position: 679507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679646:-1
position: 679646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:665879-666814:-1:exon

position:665879:-1
position: 665879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666814:-1
position: 666814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:647430-647676:-1:exon

position:647430:-1
position: 647430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:647676:-1
position: 647676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:629858-631556:-1:exon

position:631556:-1
position: 631556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GRM7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: GRM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metabotropic glutamate receptor 7 isoform X2
translation: MGRPGRVLRLLALLELPCCLLELLLGEAARGQEMYAPHSIRLEGDITLGGLFPVHAKGPLGSPCGDIKKENGIHRLEAMLYALDQINSDPDLLPNVTLGARILDTCSRDTYALEQSLTFVQALIQKDTSDVRCTNGEPPVFVKPEKVVGVIGASGSSVSIMVANILRLFQIPQISYASTAPELSDDRRYDFFSRVVPPDSFQAQAMVDIVKALGWNYVSTLASEGNYGEKGVESFMQISREAGGLCIAQSLKIPQERKDKSIDFDRIIRQLLETPNARAIVTFAHDEDIRQVLAAAKRADQVGHFLWVGSDTWGSKVSPLLQQEDVAEGAITILPKRATIEGFDTYFTSRTLENNRRNVWFAEYWEENFNCKLTITGSKKEDTDRKCTGQERIGKDSPYEQEGKVQFVIDAVYAMAHALHQMSRELCADSAGLCPEMERAGGRRLLKYIRSVNFNGSAGTPVMFNRNGDAPGRYDIFQFHSSNTSSPGYRLVGQWADDLQLNMEEMQWGGGVRAVPPSVCSQPCRPGERKKVVKGMPCCWHCELCDGYQYQADEVTCLLCSYSERPNENRTGCRSIPIVKLEWHSPWAVIPVFLAMLGIVATIFVVATFIRYNDTPIVRASGRELSYVLLTGIFLCYIITFLMIAKPDVAVCSFRRVFLGLGMCISYAALLTKTNRIYRIFEQGKKSVTAPRLISPTSQLAIASSLISVQLLGVFVWFAVDPPNIIVDYDEQKTMNPEQARGVLKCDITDLQIICSLGYSILLMVTCTVYAIKTRGVPENFNEAKPIGFTMYTTCIVWLAFIPIFFGTAQSAEKLYIQTTTLTISMNLSASVALGMLYMPKVYIIIFHPELNVQKRKRSFKAVVTAATMSSRLSHKASERPNGEARTELCESLDPSSPAAKKKYVSYNNLVI
SIO_010081: GRM7
subclass of: SO_0000673
so part of: GRM7
location: complement(join(631507..631556,647430..647676,665879..666814,679507..679646,684518..684718,689812..689952,706903..707057,708270..708411,739559..739775,814014..814523))
location: region:631507-814523:-1
so has part: feature:814014-814523:-1:exon
so has part: feature:739559-739775:-1:exon
so has part: feature:708270-708411:-1:exon
so has part: feature:706903-707057:-1:exon
so has part: feature:689812-689952:-1:exon
so has part: feature:684518-684718:-1:exon
so has part: feature:679507-679646:-1:exon
so has part: feature:665879-666814:-1:exon
so has part: feature:647430-647676:-1:exon
so has part: feature:631507-631556:-1:exon

XP_056357829.1
type: Protein
SIO_000068: ncbiprotein

position:631507:-1
position: 631507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:814523:-1
position: 814523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:814014-814523:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:739559-739775:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:708270-708411:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:706903-707057:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:689812-689952:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:684518-684718:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:679507-679646:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:665879-666814:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:647430-647676:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:631507-631556:-1:exon

GRM7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: GRM7
product: glutamate metabotropic receptor 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, 32 Proteins
transcript id: XM_056501853.1
SIO_010081: GRM7
subclass of: SO_0000673
so part of: GRM7
location: complement(join(643798..643868,647430..647676,665879..666814,679507..679646,684518..684718,689812..689952,706903..707057,708270..708411,739559..739775,814014..814607))
location: region:643798-814607:-1
so has part: feature:814014-814607:-1:exon
so has part: feature:739559-739775:-1:exon
so has part: feature:708270-708411:-1:exon
so has part: feature:706903-707057:-1:exon
so has part: feature:689812-689952:-1:exon
so has part: feature:684518-684718:-1:exon
so has part: feature:679507-679646:-1:exon
so has part: feature:665879-666814:-1:exon
so has part: feature:647430-647676:-1:exon
so has part: feature:643798-643868:-1:exon

position:643798:-1
position: 643798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:814014-814607:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:739559-739775:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:708270-708411:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:706903-707057:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:689812-689952:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:684518-684718:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:679507-679646:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:665879-666814:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:647430-647676:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:643798-643868:-1:exon

position:643868:-1
position: 643868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GRM7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: GRM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metabotropic glutamate receptor 7 isoform X1
translation: MGRPGRVLRLLALLELPCCLLELLLGEAARGQEMYAPHSIRLEGDITLGGLFPVHAKGPLGSPCGDIKKENGIHRLEAMLYALDQINSDPDLLPNVTLGARILDTCSRDTYALEQSLTFVQALIQKDTSDVRCTNGEPPVFVKPEKVVGVIGASGSSVSIMVANILRLFQIPQISYASTAPELSDDRRYDFFSRVVPPDSFQAQAMVDIVKALGWNYVSTLASEGNYGEKGVESFMQISREAGGLCIAQSLKIPQERKDKSIDFDRIIRQLLETPNARAIVTFAHDEDIRQVLAAAKRADQVGHFLWVGSDTWGSKVSPLLQQEDVAEGAITILPKRATIEGFDTYFTSRTLENNRRNVWFAEYWEENFNCKLTITGSKKEDTDRKCTGQERIGKDSPYEQEGKVQFVIDAVYAMAHALHQMSRELCADSAGLCPEMERAGGRRLLKYIRSVNFNGSAGTPVMFNRNGDAPGRYDIFQFHSSNTSSPGYRLVGQWADDLQLNMEEMQWGGGVRAVPPSVCSQPCRPGERKKVVKGMPCCWHCELCDGYQYQADEVTCLLCSYSERPNENRTGCRSIPIVKLEWHSPWAVIPVFLAMLGIVATIFVVATFIRYNDTPIVRASGRELSYVLLTGIFLCYIITFLMIAKPDVAVCSFRRVFLGLGMCISYAALLTKTNRIYRIFEQGKKSVTAPRLISPTSQLAIASSLISVQLLGVFVWFAVDPPNIIVDYDEQKTMNPEQARGVLKCDITDLQIICSLGYSILLMVTCTVYAIKTRGVPENFNEAKPIGFTMYTTCIVWLAFIPIFFGTAQSAEKLYIQTTTLTISMNLSASVALGMLYMPKVYIIIFHPELNVQKRKRSFKAVVTAATMSSRLSHKASERPNGEARTELCESLDPSNSITPVRKSVQKSVTWYTLPPTV
SIO_010081: GRM7
subclass of: SO_0000673
so part of: GRM7
location: complement(join(643798..643868,647430..647676,665879..666814,679507..679646,684518..684718,689812..689952,706903..707057,708270..708411,739559..739775,814014..814523))
location: region:643798-814523:-1
so has part: feature:814014-814523:-1:exon
so has part: feature:739559-739775:-1:exon
so has part: feature:708270-708411:-1:exon
so has part: feature:706903-707057:-1:exon
so has part: feature:689812-689952:-1:exon
so has part: feature:684518-684718:-1:exon
so has part: feature:679507-679646:-1:exon
so has part: feature:665879-666814:-1:exon
so has part: feature:647430-647676:-1:exon
so has part: feature:643798-643868:-1:exon

XP_056357828.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:814014-814523:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:739559-739775:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:708270-708411:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:706903-707057:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:689812-689952:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:684518-684718:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:679507-679646:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:665879-666814:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:647430-647676:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:643798-643868:-1:exon

EDEM1
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: EDEM1
note: ER degradation enhancing alpha-mannosidase like protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1035142..1046993)
location: region:1035142-1046993:-1
so has part: feature:1035142-1046993:-1:exon
subclass of: SO_0000010

130258338
type: Gene
SIO_000068: ncbigene

position:1035142:-1
position: 1035142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1046993:-1
position: 1046993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1035142-1046993:-1:exon

EDEM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: EDEM1
product: ER degradation enhancing alpha-mannosidase like protein 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501607.1
SIO_010081: EDEM1
subclass of: SO_0000673
so part of: EDEM1
location: complement(join(1035142..1036443,1037306..1037491,1038162..1038258,1038985..1039058,1039659..1039829,1040212..1040332,1040792..1040966,1041446..1041686,1042687..1042858,1043657..1043760,1045784..1045856,1046574..1046988))
location: region:1035142-1046988:-1
so has part: feature:1046574-1046988:-1:exon
so has part: feature:1045784-1045856:-1:exon
so has part: feature:1043657-1043760:-1:exon
so has part: feature:1042687-1042858:-1:exon
so has part: feature:1041446-1041686:-1:exon
so has part: feature:1040792-1040966:-1:exon
so has part: feature:1040212-1040332:-1:exon
so has part: feature:1039659-1039829:-1:exon
so has part: feature:1038985-1039058:-1:exon
so has part: feature:1038162-1038258:-1:exon
so has part: feature:1037306-1037491:-1:exon
so has part: feature:1035142-1036443:-1:exon

position:1046988:-1
position: 1046988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1046574-1046988:-1:exon

position:1046574:-1
position: 1046574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1045784-1045856:-1:exon

position:1045784:-1
position: 1045784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1045856:-1
position: 1045856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1043657-1043760:-1:exon

position:1043657:-1
position: 1043657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1043760:-1
position: 1043760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1042687-1042858:-1:exon

position:1042687:-1
position: 1042687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1042858:-1
position: 1042858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1041446-1041686:-1:exon

position:1041446:-1
position: 1041446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1041686:-1
position: 1041686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1040792-1040966:-1:exon

position:1040792:-1
position: 1040792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1040966:-1
position: 1040966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1040212-1040332:-1:exon

position:1040212:-1
position: 1040212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1040332:-1
position: 1040332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1039659-1039829:-1:exon

position:1039659:-1
position: 1039659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1039829:-1
position: 1039829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1038985-1039058:-1:exon

position:1038985:-1
position: 1038985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1039058:-1
position: 1039058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1038162-1038258:-1:exon

position:1038162:-1
position: 1038162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1038258:-1
position: 1038258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1037306-1037491:-1:exon

position:1037306:-1
position: 1037306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1037491:-1
position: 1037491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1035142-1036443:-1:exon

position:1036443:-1
position: 1036443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EDEM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: EDEM1
product: ER degradation enhancing alpha-mannosidase like protein 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501608.1
SIO_010081: EDEM1
subclass of: SO_0000673
so part of: EDEM1
location: complement(join(1035142..1036443,1037306..1037491,1038162..1038258,1038985..1039058,1039659..1039829,1040212..1040332,1040792..1040966,1041446..1041629,1042687..1042858,1043657..1043760,1045784..1045856,1046574..1046987))
location: region:1035142-1046987:-1
so has part: feature:1046574-1046987:-1:exon
so has part: feature:1045784-1045856:-1:exon
so has part: feature:1043657-1043760:-1:exon
so has part: feature:1042687-1042858:-1:exon
so has part: feature:1041446-1041629:-1:exon
so has part: feature:1040792-1040966:-1:exon
so has part: feature:1040212-1040332:-1:exon
so has part: feature:1039659-1039829:-1:exon
so has part: feature:1038985-1039058:-1:exon
so has part: feature:1038162-1038258:-1:exon
so has part: feature:1037306-1037491:-1:exon
so has part: feature:1035142-1036443:-1:exon

position:1046987:-1
position: 1046987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1046574-1046987:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1045784-1045856:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1043657-1043760:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1042687-1042858:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1041446-1041629:-1:exon

position:1041629:-1
position: 1041629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1040792-1040966:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1040212-1040332:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1039659-1039829:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1038985-1039058:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1038162-1038258:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1037306-1037491:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1035142-1036443:-1:exon

EDEM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: EDEM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ER degradation-enhancing alpha-mannosidase-like protein 1 isoform X2
translation: MRWRSVVLGLLLLRLGLQALLALLPALARGLCLHPRLPCPGPRPPALPGPPAGAAGRGPRLWGAAAGGDEYERRYSGAFPPQLRARLRDAARGMFVFGYDSYMEHAFPRDELDPLHCRGRGPDRRDPSNLNINDVLGNYSLTLIDALDTLAVMGNSSEFQKAVKLVIDTVSFDKDSTVQVFEATIRVLGSLLSAHIIITDSKQPFGDMTIKDYDNELLHLAHDLAVRLLPAFENTKTGIPYPRVNLKKGVPPDSHNETCTAGAGSLLVEFGILSRLLGDSTFEWVARRAVKALWSLRSNNTGLLGNVVNIQTGHWVGKQSGLGAGSDSFYEYLLKSYILFGEKEDLEMFNAAYQNIQNHLRRGREACNEGEGDPPLYVNVNMYTGQLMNTWIDSLQAFFPGLQVLIGDVEDAICLHAFYYAIWKRYGALPERYNWQLQAPDVPFYPLRPELVESTYLLYQATKNPFYLHVGMDILQSLEKYTKAKCGYATLHHVVEKTKEDRMESFFLSETCKYLYLLFDEENPVHRSGNKFMFTTEGHVVSVDERFRSSLWEDILPAEGDSSHKSKATELKAANFSSNCNRVPDERRYLLPLKSNYMRQIDRMVGLI
SIO_010081: EDEM1
subclass of: SO_0000673
so part of: EDEM1
location: complement(join(1036354..1036443,1037306..1037491,1038162..1038258,1038985..1039058,1039659..1039829,1040212..1040332,1040792..1040966,1041446..1041629,1042687..1042858,1043657..1043760,1045784..1045856,1046574..1046953))
location: region:1036354-1046953:-1
so has part: feature:1046574-1046953:-1:exon
so has part: feature:1045784-1045856:-1:exon
so has part: feature:1043657-1043760:-1:exon
so has part: feature:1042687-1042858:-1:exon
so has part: feature:1041446-1041629:-1:exon
so has part: feature:1040792-1040966:-1:exon
so has part: feature:1040212-1040332:-1:exon
so has part: feature:1039659-1039829:-1:exon
so has part: feature:1038985-1039058:-1:exon
so has part: feature:1038162-1038258:-1:exon
so has part: feature:1037306-1037491:-1:exon
so has part: feature:1036354-1036443:-1:exon

XP_056357583.1
type: Protein
SIO_000068: ncbiprotein

position:1036354:-1
position: 1036354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1046953:-1
position: 1046953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1046574-1046953:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1045784-1045856:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1043657-1043760:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1042687-1042858:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1041446-1041629:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1040792-1040966:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1040212-1040332:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1039659-1039829:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1038985-1039058:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1038162-1038258:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1037306-1037491:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1036354-1036443:-1:exon

EDEM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: EDEM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ER degradation-enhancing alpha-mannosidase-like protein 1 isoform X1
translation: MRWRSVVLGLLLLRLGLQALLALLPALARGLCLHPRLPCPGPRPPALPGPPAGAAGRGPRLWGAAAGGDEYERRYSGAFPPQLRARLRDAARGMFVFGYDSYMEHAFPRDELDPLHCRGRGPDRRDPSNLNINDVLGNYSLTLIDALDTLAVMGNSSEFQKAVKLVIDTVSFDKDSTVQVFEATIRVLGSLLSAHIIITDSKQPFGDMTIKDYDNELLHLAHDLAVRLLPAFENTKTGIPYPRVRCSCEHSWLSAACLSLFQVNLKKGVPPDSHNETCTAGAGSLLVEFGILSRLLGDSTFEWVARRAVKALWSLRSNNTGLLGNVVNIQTGHWVGKQSGLGAGSDSFYEYLLKSYILFGEKEDLEMFNAAYQNIQNHLRRGREACNEGEGDPPLYVNVNMYTGQLMNTWIDSLQAFFPGLQVLIGDVEDAICLHAFYYAIWKRYGALPERYNWQLQAPDVPFYPLRPELVESTYLLYQATKNPFYLHVGMDILQSLEKYTKAKCGYATLHHVVEKTKEDRMESFFLSETCKYLYLLFDEENPVHRSGNKFMFTTEGHVVSVDERFRSSLWEDILPAEGDSSHKSKATELKAANFSSNCNRVPDERRYLLPLKSNYMRQIDRMVGLI
SIO_010081: EDEM1
subclass of: SO_0000673
so part of: EDEM1
location: complement(join(1036354..1036443,1037306..1037491,1038162..1038258,1038985..1039058,1039659..1039829,1040212..1040332,1040792..1040966,1041446..1041686,1042687..1042858,1043657..1043760,1045784..1045856,1046574..1046953))
location: region:1036354-1046953:-1
so has part: feature:1046574-1046953:-1:exon
so has part: feature:1045784-1045856:-1:exon
so has part: feature:1043657-1043760:-1:exon
so has part: feature:1042687-1042858:-1:exon
so has part: feature:1041446-1041686:-1:exon
so has part: feature:1040792-1040966:-1:exon
so has part: feature:1040212-1040332:-1:exon
so has part: feature:1039659-1039829:-1:exon
so has part: feature:1038985-1039058:-1:exon
so has part: feature:1038162-1038258:-1:exon
so has part: feature:1037306-1037491:-1:exon
so has part: feature:1036354-1036443:-1:exon

XP_056357582.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1046574-1046953:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1045784-1045856:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1043657-1043760:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1042687-1042858:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1041446-1041686:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1040792-1040966:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1040212-1040332:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1039659-1039829:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1038985-1039058:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1038162-1038258:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1037306-1037491:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1036354-1036443:-1:exon

EDEM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: EDEM1
product: ER degradation enhancing alpha-mannosidase like protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads
transcript id: XM_056501609.1
SIO_010081: EDEM1
subclass of: SO_0000673
so part of: EDEM1
location: complement(join(1038163..1038258,1039659..1039829,1040212..1040332,1040792..1040966,1041446..1041686,1042687..1042858,1043657..1043760,1045784..1045856,1046574..1046993))
location: region:1038163-1046993:-1
so has part: feature:1046574-1046993:-1:exon
so has part: feature:1045784-1045856:-1:exon
so has part: feature:1043657-1043760:-1:exon
so has part: feature:1042687-1042858:-1:exon
so has part: feature:1041446-1041686:-1:exon
so has part: feature:1040792-1040966:-1:exon
so has part: feature:1040212-1040332:-1:exon
so has part: feature:1039659-1039829:-1:exon
so has part: feature:1038163-1038258:-1:exon

position:1038163:-1
position: 1038163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1046574-1046993:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1045784-1045856:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1043657-1043760:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1042687-1042858:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1041446-1041686:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1040792-1040966:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1040212-1040332:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1039659-1039829:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1038163-1038258:-1:exon

EDEM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: EDEM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ER degradation-enhancing alpha-mannosidase-like protein 1 isoform X3
translation: MRWRSVVLGLLLLRLGLQALLALLPALARGLCLHPRLPCPGPRPPALPGPPAGAAGRGPRLWGAAAGGDEYERRYSGAFPPQLRARLRDAARGMFVFGYDSYMEHAFPRDELDPLHCRGRGPDRRDPSNLNINDVLGNYSLTLIDALDTLAVMGNSSEFQKAVKLVIDTVSFDKDSTVQVFEATIRVLGSLLSAHIIITDSKQPFGDMTIKDYDNELLHLAHDLAVRLLPAFENTKTGIPYPRVRCSCEHSWLSAACLSLFQVNLKKGVPPDSHNETCTAGAGSLLVEFGILSRLLGDSTFEWVARRAVKALWSLRSNNTGLLGNVVNIQTGHWVGKQSGLGAGSDSFYEYLLKSYILFGEKEDLEMFNAAYQNIQNHLRRGREACNEGEGDPPLYVNVNMYTGQLMNTWIDSLQAFFPGLQVLIGDVEDAICLHAFYYAIWKRYGALPERYNWQLQAPDVPFYPLRPELVESTYLLYQVWLCHVAPRGGEDQGGSNGELLSQ
SIO_010081: EDEM1
subclass of: SO_0000673
so part of: EDEM1
location: complement(join(1038184..1038258,1039659..1039829,1040212..1040332,1040792..1040966,1041446..1041686,1042687..1042858,1043657..1043760,1045784..1045856,1046574..1046953))
location: region:1038184-1046953:-1
so has part: feature:1046574-1046953:-1:exon
so has part: feature:1045784-1045856:-1:exon
so has part: feature:1043657-1043760:-1:exon
so has part: feature:1042687-1042858:-1:exon
so has part: feature:1041446-1041686:-1:exon
so has part: feature:1040792-1040966:-1:exon
so has part: feature:1040212-1040332:-1:exon
so has part: feature:1039659-1039829:-1:exon
so has part: feature:1038184-1038258:-1:exon

XP_056357584.1
type: Protein
SIO_000068: ncbiprotein

position:1038184:-1
position: 1038184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1046574-1046953:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1045784-1045856:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1043657-1043760:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1042687-1042858:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1041446-1041686:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1040792-1040966:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1040212-1040332:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1039659-1039829:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1038184-1038258:-1:exon

ARL8B
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: ARL8B
note: ADP ribosylation factor like GTPase 8B; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1049147..1066061)
location: region:1049147-1066061:-1
so has part: feature:1049147-1066061:-1:exon
subclass of: SO_0000010

130258326
type: Gene
SIO_000068: ncbigene

position:1049147:-1
position: 1049147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1066061:-1
position: 1066061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1049147-1066061:-1:exon

ARL8B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: ARL8B
product: ADP ribosylation factor like GTPase 8B
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501595.1
SIO_010081: ARL8B
subclass of: SO_0000673
so part of: ARL8B
location: complement(join(1049147..1053639,1054994..1055064,1055295..1055362,1055941..1056034,1056435..1056508,1057102..1057182,1065714..1066061))
location: region:1049147-1066061:-1
so has part: feature:1065714-1066061:-1:exon
so has part: feature:1057102-1057182:-1:exon
so has part: feature:1056435-1056508:-1:exon
so has part: feature:1055941-1056034:-1:exon
so has part: feature:1055295-1055362:-1:exon
so has part: feature:1054994-1055064:-1:exon
so has part: feature:1049147-1053639:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1065714-1066061:-1:exon

position:1065714:-1
position: 1065714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1057102-1057182:-1:exon

position:1057102:-1
position: 1057102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1057182:-1
position: 1057182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1056435-1056508:-1:exon

position:1056435:-1
position: 1056435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1056508:-1
position: 1056508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1055941-1056034:-1:exon

position:1055941:-1
position: 1055941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1056034:-1
position: 1056034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1055295-1055362:-1:exon

position:1055295:-1
position: 1055295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1055362:-1
position: 1055362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1054994-1055064:-1:exon

position:1054994:-1
position: 1054994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1055064:-1
position: 1055064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1049147-1053639:-1:exon

position:1053639:-1
position: 1053639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARL8B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: ARL8B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor-like protein 8B
translation: MLALLSRLLDWFRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMVDAADRDKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLAAIQDREICCYSISCKEKDNIDITLQWLIQHSKSRRS
SIO_010081: ARL8B
subclass of: SO_0000673
so part of: ARL8B
location: complement(join(1053590..1053639,1054994..1055064,1055295..1055362,1055941..1056034,1056435..1056508,1057102..1057182,1065714..1065836))
location: region:1053590-1065836:-1
so has part: feature:1065714-1065836:-1:exon
so has part: feature:1057102-1057182:-1:exon
so has part: feature:1056435-1056508:-1:exon
so has part: feature:1055941-1056034:-1:exon
so has part: feature:1055295-1055362:-1:exon
so has part: feature:1054994-1055064:-1:exon
so has part: feature:1053590-1053639:-1:exon

XP_056357570.1
type: Protein
SIO_000068: ncbiprotein

position:1053590:-1
position: 1053590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1065836:-1
position: 1065836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1065714-1065836:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1057102-1057182:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1056435-1056508:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1055941-1056034:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1055295-1055362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1054994-1055064:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1053590-1053639:-1:exon

BHLHE40
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: BHLHE40
note: basic helix-loop-helix family member e40; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1082712..1086639)
location: region:1082712-1086639:-1
so has part: feature:1082712-1086639:-1:exon
subclass of: SO_0000010

130258378
type: Gene
SIO_000068: ncbigene

position:1082712:-1
position: 1082712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1086639:-1
position: 1086639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1082712-1086639:-1:exon

BHLHE40
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: BHLHE40
product: basic helix-loop-helix family member e40
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501694.1
SIO_010081: BHLHE40
subclass of: SO_0000673
so part of: BHLHE40
location: complement(join(1082712..1084236,1085206..1085329,1085845..1085952,1086143..1086212,1086307..1086639))
location: region:1082712-1086639:-1
so has part: feature:1086307-1086639:-1:exon
so has part: feature:1086143-1086212:-1:exon
so has part: feature:1085845-1085952:-1:exon
so has part: feature:1085206-1085329:-1:exon
so has part: feature:1082712-1084236:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1086307-1086639:-1:exon

position:1086307:-1
position: 1086307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1086143-1086212:-1:exon

position:1086143:-1
position: 1086143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1086212:-1
position: 1086212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1085845-1085952:-1:exon

position:1085845:-1
position: 1085845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1085952:-1
position: 1085952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1085206-1085329:-1:exon

position:1085206:-1
position: 1085206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1085329:-1
position: 1085329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1082712-1084236:-1:exon

position:1084236:-1
position: 1084236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BHLHE40
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: BHLHE40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class E basic helix-loop-helix protein 40
translation: MERIPSAQPPPGCLGKLPALESGDLPGLDFAHMYQVYKPRRGLKRSEDNKETYKLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTNLIEQQQQKIIALQSGLQAGDLSSRNLDSSQEMFRSGFQMCAKEMLQYLAKHENGKELKPSQLVSHLQRMASEVLQGGAPRKAADIPPKMGDLKEKPAALGEGHGKNCVPVIQRTFAHSSGEQSGSDTDTDSGYGGELDKSDSKSEQPYFRKDTDLKYAVQERISSIKQETEDPPAKRSRLESPQDEGPFGSDMMGSPSSFLGPHAHQPPLCLPFYLIPPSATAYLPMLEKCWYPASVPVLYPSLPASAAALTGFMNPDKISPPLLMPQRLPSPVPAHSPIDSSALLQALKQIPPLNLETKD
SIO_010081: BHLHE40
subclass of: SO_0000673
so part of: BHLHE40
location: complement(join(1083386..1084236,1085206..1085329,1085845..1085952,1086143..1086212,1086307..1086386))
location: region:1083386-1086386:-1
so has part: feature:1086307-1086386:-1:exon
so has part: feature:1086143-1086212:-1:exon
so has part: feature:1085845-1085952:-1:exon
so has part: feature:1085206-1085329:-1:exon
so has part: feature:1083386-1084236:-1:exon

XP_056357669.1
type: Protein
SIO_000068: ncbiprotein

position:1083386:-1
position: 1083386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1086386:-1
position: 1086386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1086307-1086386:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1086143-1086212:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1085845-1085952:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1085206-1085329:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1083386-1084236:-1:exon

LOC130258306
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: LOC130258306
note: uncharacterized LOC130258306; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1088036..1092716
location: region:1088036-1092716:1
so has part: feature:1088036-1092716:1:exon
subclass of: SO_0000010

130258306
type: Gene
SIO_000068: ncbigene

position:1088036:1
position: 1088036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1092716:1
position: 1092716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1088036-1092716:1:exon

LOC130258306
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: LOC130258306
product: uncharacterized LOC130258306
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads
transcript id: XM_056501558.1
SIO_010081: LOC130258306
subclass of: SO_0000673
so part of: LOC130258306
location: join(1088036..1090210,1090526..1092716)
location: region:1088036-1092716:1
so has part: feature:1088036-1090210:1:exon
so has part: feature:1090526-1092716:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1088036-1090210:1:exon

position:1090210:1
position: 1090210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1090526-1092716:1:exon

position:1090526:1
position: 1090526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC130258306
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: LOC130258306
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC130258306
translation: MRGAAALLSAPPAGLGVTGPTARVQGDLQLFTEAREAIPARVTGTGGESSAVPRLERARCRQGCAQPRHPRPRAPGRNTPCFPHRTAPVGARLGSGALSVLGKRDSSAPEPRGSAAAAAASGTGGRHGLGSGARTAGDSTSIPASLHLPSLHPSIPASSIPASLHPCIFHPCIPPSLHLPSLHPCIPPSLHLPSLHPSIPASSIPPSLHLPSLHPSIPASSIPPSLHPSIPASSIPPSLHPSIPASSIPPSLHPCIPPSLHLPSLHPCIPAVLLSAQCGMCPAGAAGSAARLLSHRSVPHPSAKAAPRGCCGTPQRRV
SIO_010081: LOC130258306
subclass of: SO_0000673
so part of: LOC130258306
location: join(1090102..1090210,1090526..1091373)
location: region:1090102-1091373:1
so has part: feature:1090102-1090210:1:exon
so has part: feature:1090526-1091373:1:exon

XP_056357533.1
type: Protein
SIO_000068: ncbiprotein

position:1090102:1
position: 1090102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1091373:1
position: 1091373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1090102-1090210:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1090526-1091373:1:exon

ITPR1
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: ITPR1
note: inositol 1,4,5-trisphosphate receptor type 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1133880..1298276)
location: region:1133880-1298276:-1
so has part: feature:1133880-1298276:-1:exon
subclass of: SO_0000010

130258144
type: Gene
SIO_000068: ncbigene

position:1133880:-1
position: 1133880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1298276:-1
position: 1298276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1133880-1298276:-1:exon

ITPR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: ITPR1
product: inositol 1,4,5-trisphosphate receptor type 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501261.1
SIO_010081: ITPR1
subclass of: SO_0000673
so part of: ITPR1
location: complement(join(1133880..1135240,1139393..1139554,1151163..1151323,1152378..1152543,1154716..1154855,1156721..1156822,1157317..1157512,1158643..1158807,1159425..1159600,1162412..1162534,1165153..1165345,1166201..1166305,1167275..1167397,1167761..1167856,1169117..1169227,1170347..1170547,1174031..1174284,1175342..1175522,1189277..1189467,1189977..1190106,1209637..1209748,1210616..1210764,1211797..1211981,1213041..1213161,1216013..1216141,1216832..1216957,1217467..1217718,1219595..1219795,1220151..1220276,1221715..1221852,1222558..1222623,1223541..1223711,1223811..1223972,1224328..1224386,1224558..1224696,1226143..1226330,1227106..1227259,1228176..1228317,1232016..1232267,1234054..1234248,1235300..1235419,1235668..1235840,1236420..1236578,1237041..1237182,1237943..1238103,1238525..1238624,1239455..1239603,1244404..1244499,1245642..1245788,1245879..1245962,1246421..1246519,1249312..1249470,1250176..1250262,1253590..1253705,1280669..1280739,1284289..1284396,1298152..1298276))
location: region:1133880-1298276:-1
so has part: feature:1298152-1298276:-1:exon
so has part: feature:1284289-1284396:-1:exon
so has part: feature:1280669-1280739:-1:exon
so has part: feature:1253590-1253705:-1:exon
so has part: feature:1250176-1250262:-1:exon
so has part: feature:1249312-1249470:-1:exon
so has part: feature:1246421-1246519:-1:exon
so has part: feature:1245879-1245962:-1:exon
so has part: feature:1245642-1245788:-1:exon
so has part: feature:1244404-1244499:-1:exon
so has part: feature:1239455-1239603:-1:exon
so has part: feature:1238525-1238624:-1:exon
so has part: feature:1237943-1238103:-1:exon
so has part: feature:1237041-1237182:-1:exon
so has part: feature:1236420-1236578:-1:exon
so has part: feature:1235668-1235840:-1:exon
so has part: feature:1235300-1235419:-1:exon
so has part: feature:1234054-1234248:-1:exon
so has part: feature:1232016-1232267:-1:exon
so has part: feature:1228176-1228317:-1:exon
so has part: feature:1227106-1227259:-1:exon
so has part: feature:1226143-1226330:-1:exon
so has part: feature:1224558-1224696:-1:exon
so has part: feature:1224328-1224386:-1:exon
so has part: feature:1223811-1223972:-1:exon
so has part: feature:1223541-1223711:-1:exon
so has part: feature:1222558-1222623:-1:exon
so has part: feature:1221715-1221852:-1:exon
so has part: feature:1220151-1220276:-1:exon
so has part: feature:1219595-1219795:-1:exon
so has part: feature:1217467-1217718:-1:exon
so has part: feature:1216832-1216957:-1:exon
so has part: feature:1216013-1216141:-1:exon
so has part: feature:1213041-1213161:-1:exon
so has part: feature:1211797-1211981:-1:exon
so has part: feature:1210616-1210764:-1:exon
so has part: feature:1209637-1209748:-1:exon
so has part: feature:1189977-1190106:-1:exon
so has part: feature:1189277-1189467:-1:exon
so has part: feature:1175342-1175522:-1:exon
so has part: feature:1174031-1174284:-1:exon
so has part: feature:1170347-1170547:-1:exon
so has part: feature:1169117-1169227:-1:exon
so has part: feature:1167761-1167856:-1:exon
so has part: feature:1167275-1167397:-1:exon
so has part: feature:1166201-1166305:-1:exon
so has part: feature:1165153-1165345:-1:exon
so has part: feature:1162412-1162534:-1:exon
so has part: feature:1159425-1159600:-1:exon
so has part: feature:1158643-1158807:-1:exon
so has part: feature:1157317-1157512:-1:exon
so has part: feature:1156721-1156822:-1:exon
so has part: feature:1154716-1154855:-1:exon
so has part: feature:1152378-1152543:-1:exon
so has part: feature:1151163-1151323:-1:exon
so has part: feature:1139393-1139554:-1:exon
so has part: feature:1133880-1135240:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1298152-1298276:-1:exon

position:1298152:-1
position: 1298152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1284289-1284396:-1:exon

position:1284289:-1
position: 1284289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1284396:-1
position: 1284396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1280669-1280739:-1:exon

position:1280669:-1
position: 1280669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1280739:-1
position: 1280739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1253590-1253705:-1:exon

position:1253590:-1
position: 1253590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1253705:-1
position: 1253705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1250176-1250262:-1:exon

position:1250176:-1
position: 1250176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1250262:-1
position: 1250262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1249312-1249470:-1:exon

position:1249312:-1
position: 1249312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1249470:-1
position: 1249470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1246421-1246519:-1:exon

position:1246421:-1
position: 1246421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1246519:-1
position: 1246519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1245879-1245962:-1:exon

position:1245879:-1
position: 1245879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1245962:-1
position: 1245962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1245642-1245788:-1:exon

position:1245642:-1
position: 1245642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1245788:-1
position: 1245788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1244404-1244499:-1:exon

position:1244404:-1
position: 1244404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1244499:-1
position: 1244499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1239455-1239603:-1:exon

position:1239455:-1
position: 1239455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1239603:-1
position: 1239603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1238525-1238624:-1:exon

position:1238525:-1
position: 1238525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1238624:-1
position: 1238624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1237943-1238103:-1:exon

position:1237943:-1
position: 1237943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1238103:-1
position: 1238103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1237041-1237182:-1:exon

position:1237041:-1
position: 1237041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1237182:-1
position: 1237182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1236420-1236578:-1:exon

position:1236420:-1
position: 1236420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1236578:-1
position: 1236578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1235668-1235840:-1:exon

position:1235668:-1
position: 1235668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1235840:-1
position: 1235840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1235300-1235419:-1:exon

position:1235300:-1
position: 1235300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1235419:-1
position: 1235419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1234054-1234248:-1:exon

position:1234054:-1
position: 1234054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1234248:-1
position: 1234248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1232016-1232267:-1:exon

position:1232016:-1
position: 1232016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1232267:-1
position: 1232267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1228176-1228317:-1:exon

position:1228176:-1
position: 1228176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1228317:-1
position: 1228317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1227106-1227259:-1:exon

position:1227106:-1
position: 1227106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1227259:-1
position: 1227259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1226143-1226330:-1:exon

position:1226143:-1
position: 1226143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1226330:-1
position: 1226330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1224558-1224696:-1:exon

position:1224558:-1
position: 1224558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1224696:-1
position: 1224696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1224328-1224386:-1:exon

position:1224328:-1
position: 1224328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1224386:-1
position: 1224386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1223811-1223972:-1:exon

position:1223811:-1
position: 1223811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1223972:-1
position: 1223972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1223541-1223711:-1:exon

position:1223541:-1
position: 1223541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1223711:-1
position: 1223711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1222558-1222623:-1:exon

position:1222558:-1
position: 1222558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1222623:-1
position: 1222623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1221715-1221852:-1:exon

position:1221715:-1
position: 1221715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1221852:-1
position: 1221852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1220151-1220276:-1:exon

position:1220151:-1
position: 1220151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1220276:-1
position: 1220276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1219595-1219795:-1:exon

position:1219595:-1
position: 1219595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1219795:-1
position: 1219795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1217467-1217718:-1:exon

position:1217467:-1
position: 1217467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1217718:-1
position: 1217718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1216832-1216957:-1:exon

position:1216832:-1
position: 1216832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1216957:-1
position: 1216957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1216013-1216141:-1:exon

position:1216013:-1
position: 1216013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1216141:-1
position: 1216141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1213041-1213161:-1:exon

position:1213041:-1
position: 1213041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1213161:-1
position: 1213161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1211797-1211981:-1:exon

position:1211797:-1
position: 1211797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1211981:-1
position: 1211981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:1210616-1210764:-1:exon

position:1210616:-1
position: 1210616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1210764:-1
position: 1210764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:1209637-1209748:-1:exon

position:1209637:-1
position: 1209637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1209748:-1
position: 1209748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:1189977-1190106:-1:exon

position:1189977:-1
position: 1189977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1190106:-1
position: 1190106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:1189277-1189467:-1:exon

position:1189277:-1
position: 1189277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1189467:-1
position: 1189467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:1175342-1175522:-1:exon

position:1175342:-1
position: 1175342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175522:-1
position: 1175522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:1174031-1174284:-1:exon

position:1174031:-1
position: 1174031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1174284:-1
position: 1174284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:1170347-1170547:-1:exon

position:1170347:-1
position: 1170347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1170547:-1
position: 1170547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:1169117-1169227:-1:exon

position:1169117:-1
position: 1169117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1169227:-1
position: 1169227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:1167761-1167856:-1:exon

position:1167761:-1
position: 1167761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167856:-1
position: 1167856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:1167275-1167397:-1:exon

position:1167275:-1
position: 1167275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167397:-1
position: 1167397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:1166201-1166305:-1:exon

position:1166201:-1
position: 1166201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1166305:-1
position: 1166305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:1165153-1165345:-1:exon

position:1165153:-1
position: 1165153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165345:-1
position: 1165345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:1162412-1162534:-1:exon

position:1162412:-1
position: 1162412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1162534:-1
position: 1162534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:1159425-1159600:-1:exon

position:1159425:-1
position: 1159425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1159600:-1
position: 1159600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:1158643-1158807:-1:exon

position:1158643:-1
position: 1158643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1158807:-1
position: 1158807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:1157317-1157512:-1:exon

position:1157317:-1
position: 1157317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1157512:-1
position: 1157512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:1156721-1156822:-1:exon

position:1156721:-1
position: 1156721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1156822:-1
position: 1156822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 53
SIO_000628: feature:1154716-1154855:-1:exon

position:1154716:-1
position: 1154716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1154855:-1
position: 1154855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 54
SIO_000628: feature:1152378-1152543:-1:exon

position:1152378:-1
position: 1152378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1152543:-1
position: 1152543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 55
SIO_000628: feature:1151163-1151323:-1:exon

position:1151163:-1
position: 1151163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1151323:-1
position: 1151323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 56
SIO_000628: feature:1139393-1139554:-1:exon

position:1139393:-1
position: 1139393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1139554:-1
position: 1139554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 57
SIO_000628: feature:1133880-1135240:-1:exon

position:1135240:-1
position: 1135240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ITPR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: ITPR1
product: inositol 1,4,5-trisphosphate receptor type 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501259.1
SIO_010081: ITPR1
subclass of: SO_0000673
so part of: ITPR1
location: complement(join(1133880..1135240,1139393..1139554,1151163..1151323,1152378..1152543,1154716..1154855,1156721..1156822,1157317..1157512,1158643..1158807,1159425..1159600,1162412..1162534,1165153..1165345,1166201..1166305,1167275..1167397,1167761..1167856,1169117..1169227,1170347..1170547,1174031..1174284,1175342..1175522,1189277..1189467,1189977..1190106,1209637..1209748,1210616..1210764,1211797..1211981,1213041..1213161,1216013..1216141,1216832..1216957,1217467..1217718,1219595..1219795,1220151..1220276,1221715..1221852,1222558..1222623,1223541..1223711,1223811..1223972,1224328..1224386,1224558..1224696,1226143..1226330,1227106..1227259,1228176..1228317,1232016..1232267,1234054..1234248,1235300..1235419,1235668..1235840,1236420..1236578,1237041..1237182,1237943..1238103,1238525..1238624,1239455..1239603,1243344..1243388,1244404..1244499,1245642..1245788,1245879..1245962,1246421..1246519,1249312..1249470,1250176..1250262,1253590..1253705,1280669..1280739,1284289..1284396,1298152..1298276))
location: region:1133880-1298276:-1
so has part: feature:1298152-1298276:-1:exon
so has part: feature:1284289-1284396:-1:exon
so has part: feature:1280669-1280739:-1:exon
so has part: feature:1253590-1253705:-1:exon
so has part: feature:1250176-1250262:-1:exon
so has part: feature:1249312-1249470:-1:exon
so has part: feature:1246421-1246519:-1:exon
so has part: feature:1245879-1245962:-1:exon
so has part: feature:1245642-1245788:-1:exon
so has part: feature:1244404-1244499:-1:exon
so has part: feature:1243344-1243388:-1:exon
so has part: feature:1239455-1239603:-1:exon
so has part: feature:1238525-1238624:-1:exon
so has part: feature:1237943-1238103:-1:exon
so has part: feature:1237041-1237182:-1:exon
so has part: feature:1236420-1236578:-1:exon
so has part: feature:1235668-1235840:-1:exon
so has part: feature:1235300-1235419:-1:exon
so has part: feature:1234054-1234248:-1:exon
so has part: feature:1232016-1232267:-1:exon
so has part: feature:1228176-1228317:-1:exon
so has part: feature:1227106-1227259:-1:exon
so has part: feature:1226143-1226330:-1:exon
so has part: feature:1224558-1224696:-1:exon
so has part: feature:1224328-1224386:-1:exon
so has part: feature:1223811-1223972:-1:exon
so has part: feature:1223541-1223711:-1:exon
so has part: feature:1222558-1222623:-1:exon
so has part: feature:1221715-1221852:-1:exon
so has part: feature:1220151-1220276:-1:exon
so has part: feature:1219595-1219795:-1:exon
so has part: feature:1217467-1217718:-1:exon
so has part: feature:1216832-1216957:-1:exon
so has part: feature:1216013-1216141:-1:exon
so has part: feature:1213041-1213161:-1:exon
so has part: feature:1211797-1211981:-1:exon
so has part: feature:1210616-1210764:-1:exon
so has part: feature:1209637-1209748:-1:exon
so has part: feature:1189977-1190106:-1:exon
so has part: feature:1189277-1189467:-1:exon
so has part: feature:1175342-1175522:-1:exon
so has part: feature:1174031-1174284:-1:exon
so has part: feature:1170347-1170547:-1:exon
so has part: feature:1169117-1169227:-1:exon
so has part: feature:1167761-1167856:-1:exon
so has part: feature:1167275-1167397:-1:exon
so has part: feature:1166201-1166305:-1:exon
so has part: feature:1165153-1165345:-1:exon
so has part: feature:1162412-1162534:-1:exon
so has part: feature:1159425-1159600:-1:exon
so has part: feature:1158643-1158807:-1:exon
so has part: feature:1157317-1157512:-1:exon
so has part: feature:1156721-1156822:-1:exon
so has part: feature:1154716-1154855:-1:exon
so has part: feature:1152378-1152543:-1:exon
so has part: feature:1151163-1151323:-1:exon
so has part: feature:1139393-1139554:-1:exon
so has part: feature:1133880-1135240:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1298152-1298276:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1284289-1284396:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1280669-1280739:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1253590-1253705:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1250176-1250262:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1249312-1249470:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1246421-1246519:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1245879-1245962:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1245642-1245788:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1244404-1244499:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1243344-1243388:-1:exon

position:1243344:-1
position: 1243344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1243388:-1
position: 1243388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1239455-1239603:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1238525-1238624:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1237943-1238103:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1237041-1237182:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1236420-1236578:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1235668-1235840:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1235300-1235419:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1234054-1234248:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1232016-1232267:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1228176-1228317:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1227106-1227259:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1226143-1226330:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1224558-1224696:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1224328-1224386:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1223811-1223972:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1223541-1223711:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1222558-1222623:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1221715-1221852:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1220151-1220276:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1219595-1219795:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1217467-1217718:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1216832-1216957:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1216013-1216141:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1213041-1213161:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1211797-1211981:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1210616-1210764:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1209637-1209748:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1189977-1190106:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1189277-1189467:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1175342-1175522:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1174031-1174284:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1170347-1170547:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1169117-1169227:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1167761-1167856:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1167275-1167397:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1166201-1166305:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1165153-1165345:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1162412-1162534:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1159425-1159600:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1158643-1158807:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1157317-1157512:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1156721-1156822:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1154716-1154855:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1152378-1152543:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1151163-1151323:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:1139393-1139554:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:1133880-1135240:-1:exon

ITPR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: ITPR1
product: inositol 1,4,5-trisphosphate receptor type 1, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501263.1
SIO_010081: ITPR1
subclass of: SO_0000673
so part of: ITPR1
location: complement(join(1133880..1135240,1139393..1139554,1151163..1151323,1152378..1152543,1154716..1154855,1156721..1156822,1157317..1157512,1158643..1158807,1159425..1159600,1162412..1162534,1165153..1165345,1166201..1166305,1167275..1167397,1167761..1167856,1169117..1169227,1170347..1170547,1174031..1174284,1175342..1175522,1189277..1189467,1189977..1190106,1194881..1194931,1196374..1196409,1205627..1205653,1209637..1209748,1210616..1210764,1211797..1211981,1213041..1213161,1216013..1216141,1216832..1216957,1217467..1217718,1219595..1219795,1220151..1220276,1221715..1221852,1222558..1222623,1223541..1223711,1223811..1223972,1224328..1224386,1224558..1224696,1226143..1226330,1227106..1227259,1228176..1228317,1232016..1232267,1234054..1234248,1235300..1235419,1235668..1235840,1236420..1236578,1237041..1237182,1237943..1238103,1238525..1238624,1239455..1239603,1243344..1243388,1244404..1244499,1245642..1245788,1245879..1245962,1246421..1246519,1249312..1249470,1250176..1250262,1253590..1253705,1280669..1280739,1284289..1284396,1298152..1298276))
location: region:1133880-1298276:-1
so has part: feature:1298152-1298276:-1:exon
so has part: feature:1284289-1284396:-1:exon
so has part: feature:1280669-1280739:-1:exon
so has part: feature:1253590-1253705:-1:exon
so has part: feature:1250176-1250262:-1:exon
so has part: feature:1249312-1249470:-1:exon
so has part: feature:1246421-1246519:-1:exon
so has part: feature:1245879-1245962:-1:exon
so has part: feature:1245642-1245788:-1:exon
so has part: feature:1244404-1244499:-1:exon
so has part: feature:1243344-1243388:-1:exon
so has part: feature:1239455-1239603:-1:exon
so has part: feature:1238525-1238624:-1:exon
so has part: feature:1237943-1238103:-1:exon
so has part: feature:1237041-1237182:-1:exon
so has part: feature:1236420-1236578:-1:exon
so has part: feature:1235668-1235840:-1:exon
so has part: feature:1235300-1235419:-1:exon
so has part: feature:1234054-1234248:-1:exon
so has part: feature:1232016-1232267:-1:exon
so has part: feature:1228176-1228317:-1:exon
so has part: feature:1227106-1227259:-1:exon
so has part: feature:1226143-1226330:-1:exon
so has part: feature:1224558-1224696:-1:exon
so has part: feature:1224328-1224386:-1:exon
so has part: feature:1223811-1223972:-1:exon
so has part: feature:1223541-1223711:-1:exon
so has part: feature:1222558-1222623:-1:exon
so has part: feature:1221715-1221852:-1:exon
so has part: feature:1220151-1220276:-1:exon
so has part: feature:1219595-1219795:-1:exon
so has part: feature:1217467-1217718:-1:exon
so has part: feature:1216832-1216957:-1:exon
so has part: feature:1216013-1216141:-1:exon
so has part: feature:1213041-1213161:-1:exon
so has part: feature:1211797-1211981:-1:exon
so has part: feature:1210616-1210764:-1:exon
so has part: feature:1209637-1209748:-1:exon
so has part: feature:1205627-1205653:-1:exon
so has part: feature:1196374-1196409:-1:exon
so has part: feature:1194881-1194931:-1:exon
so has part: feature:1189977-1190106:-1:exon
so has part: feature:1189277-1189467:-1:exon
so has part: feature:1175342-1175522:-1:exon
so has part: feature:1174031-1174284:-1:exon
so has part: feature:1170347-1170547:-1:exon
so has part: feature:1169117-1169227:-1:exon
so has part: feature:1167761-1167856:-1:exon
so has part: feature:1167275-1167397:-1:exon
so has part: feature:1166201-1166305:-1:exon
so has part: feature:1165153-1165345:-1:exon
so has part: feature:1162412-1162534:-1:exon
so has part: feature:1159425-1159600:-1:exon
so has part: feature:1158643-1158807:-1:exon
so has part: feature:1157317-1157512:-1:exon
so has part: feature:1156721-1156822:-1:exon
so has part: feature:1154716-1154855:-1:exon
so has part: feature:1152378-1152543:-1:exon
so has part: feature:1151163-1151323:-1:exon
so has part: feature:1139393-1139554:-1:exon
so has part: feature:1133880-1135240:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1298152-1298276:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1284289-1284396:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1280669-1280739:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1253590-1253705:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1250176-1250262:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1249312-1249470:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1246421-1246519:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1245879-1245962:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1245642-1245788:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1244404-1244499:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1243344-1243388:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1239455-1239603:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1238525-1238624:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1237943-1238103:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1237041-1237182:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1236420-1236578:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1235668-1235840:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1235300-1235419:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1234054-1234248:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1232016-1232267:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1228176-1228317:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1227106-1227259:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1226143-1226330:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1224558-1224696:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1224328-1224386:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1223811-1223972:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1223541-1223711:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1222558-1222623:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1221715-1221852:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1220151-1220276:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1219595-1219795:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1217467-1217718:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1216832-1216957:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1216013-1216141:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1213041-1213161:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1211797-1211981:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1210616-1210764:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1209637-1209748:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1205627-1205653:-1:exon

position:1205627:-1
position: 1205627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205653:-1
position: 1205653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:1196374-1196409:-1:exon

position:1196374:-1
position: 1196374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1196409:-1
position: 1196409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:1194881-1194931:-1:exon

position:1194881:-1
position: 1194881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1194931:-1
position: 1194931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:1189977-1190106:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1189277-1189467:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1175342-1175522:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1174031-1174284:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1170347-1170547:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1169117-1169227:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1167761-1167856:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1167275-1167397:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1166201-1166305:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1165153-1165345:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1162412-1162534:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1159425-1159600:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1158643-1158807:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1157317-1157512:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1156721-1156822:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:1154716-1154855:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:1152378-1152543:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:1151163-1151323:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:1139393-1139554:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:1133880-1135240:-1:exon

ITPR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: ITPR1
product: inositol 1,4,5-trisphosphate receptor type 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501260.1
SIO_010081: ITPR1
subclass of: SO_0000673
so part of: ITPR1
location: complement(join(1133880..1135240,1139393..1139554,1151163..1151323,1152378..1152543,1154716..1154855,1156721..1156822,1157317..1157512,1158643..1158807,1159425..1159600,1162412..1162534,1165153..1165345,1166201..1166305,1167275..1167397,1167761..1167856,1169117..1169227,1170347..1170547,1174031..1174284,1175342..1175522,1189277..1189467,1189977..1190106,1209637..1209748,1210616..1210764,1211797..1211981,1213041..1213161,1216013..1216141,1216832..1216957,1217467..1217718,1219595..1219795,1220151..1220276,1221715..1221852,1222558..1222623,1223541..1223711,1223811..1223972,1224328..1224386,1224558..1224696,1226143..1226330,1227106..1227259,1228176..1228317,1232016..1232267,1234054..1234248,1235300..1235419,1235668..1235840,1236420..1236578,1237041..1237182,1237943..1238103,1238525..1238624,1239455..1239603,1243344..1243388,1244404..1244499,1245642..1245788,1245879..1245962,1246421..1246519,1249312..1249470,1250176..1250262,1253590..1253705,1280669..1280739,1283029..1283466))
location: region:1133880-1283466:-1
so has part: feature:1283029-1283466:-1:exon
so has part: feature:1280669-1280739:-1:exon
so has part: feature:1253590-1253705:-1:exon
so has part: feature:1250176-1250262:-1:exon
so has part: feature:1249312-1249470:-1:exon
so has part: feature:1246421-1246519:-1:exon
so has part: feature:1245879-1245962:-1:exon
so has part: feature:1245642-1245788:-1:exon
so has part: feature:1244404-1244499:-1:exon
so has part: feature:1243344-1243388:-1:exon
so has part: feature:1239455-1239603:-1:exon
so has part: feature:1238525-1238624:-1:exon
so has part: feature:1237943-1238103:-1:exon
so has part: feature:1237041-1237182:-1:exon
so has part: feature:1236420-1236578:-1:exon
so has part: feature:1235668-1235840:-1:exon
so has part: feature:1235300-1235419:-1:exon
so has part: feature:1234054-1234248:-1:exon
so has part: feature:1232016-1232267:-1:exon
so has part: feature:1228176-1228317:-1:exon
so has part: feature:1227106-1227259:-1:exon
so has part: feature:1226143-1226330:-1:exon
so has part: feature:1224558-1224696:-1:exon
so has part: feature:1224328-1224386:-1:exon
so has part: feature:1223811-1223972:-1:exon
so has part: feature:1223541-1223711:-1:exon
so has part: feature:1222558-1222623:-1:exon
so has part: feature:1221715-1221852:-1:exon
so has part: feature:1220151-1220276:-1:exon
so has part: feature:1219595-1219795:-1:exon
so has part: feature:1217467-1217718:-1:exon
so has part: feature:1216832-1216957:-1:exon
so has part: feature:1216013-1216141:-1:exon
so has part: feature:1213041-1213161:-1:exon
so has part: feature:1211797-1211981:-1:exon
so has part: feature:1210616-1210764:-1:exon
so has part: feature:1209637-1209748:-1:exon
so has part: feature:1189977-1190106:-1:exon
so has part: feature:1189277-1189467:-1:exon
so has part: feature:1175342-1175522:-1:exon
so has part: feature:1174031-1174284:-1:exon
so has part: feature:1170347-1170547:-1:exon
so has part: feature:1169117-1169227:-1:exon
so has part: feature:1167761-1167856:-1:exon
so has part: feature:1167275-1167397:-1:exon
so has part: feature:1166201-1166305:-1:exon
so has part: feature:1165153-1165345:-1:exon
so has part: feature:1162412-1162534:-1:exon
so has part: feature:1159425-1159600:-1:exon
so has part: feature:1158643-1158807:-1:exon
so has part: feature:1157317-1157512:-1:exon
so has part: feature:1156721-1156822:-1:exon
so has part: feature:1154716-1154855:-1:exon
so has part: feature:1152378-1152543:-1:exon
so has part: feature:1151163-1151323:-1:exon
so has part: feature:1139393-1139554:-1:exon
so has part: feature:1133880-1135240:-1:exon

position:1283466:-1
position: 1283466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1283029-1283466:-1:exon

position:1283029:-1
position: 1283029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1280669-1280739:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1253590-1253705:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1250176-1250262:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1249312-1249470:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1246421-1246519:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1245879-1245962:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1245642-1245788:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1244404-1244499:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1243344-1243388:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1239455-1239603:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1238525-1238624:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1237943-1238103:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1237041-1237182:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1236420-1236578:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1235668-1235840:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1235300-1235419:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1234054-1234248:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1232016-1232267:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1228176-1228317:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1227106-1227259:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1226143-1226330:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1224558-1224696:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1224328-1224386:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1223811-1223972:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1223541-1223711:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1222558-1222623:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1221715-1221852:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1220151-1220276:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1219595-1219795:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1217467-1217718:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1216832-1216957:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1216013-1216141:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1213041-1213161:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1211797-1211981:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1210616-1210764:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1209637-1209748:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1189977-1190106:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1189277-1189467:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1175342-1175522:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1174031-1174284:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1170347-1170547:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1169117-1169227:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1167761-1167856:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1167275-1167397:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1166201-1166305:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1165153-1165345:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1162412-1162534:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1159425-1159600:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1158643-1158807:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1157317-1157512:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1156721-1156822:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1154716-1154855:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1152378-1152543:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1151163-1151323:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1139393-1139554:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:1133880-1135240:-1:exon

ITPR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: ITPR1
product: inositol 1,4,5-trisphosphate receptor type 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501262.1
SIO_010081: ITPR1
subclass of: SO_0000673
so part of: ITPR1
location: complement(join(1133880..1135240,1139393..1139554,1151163..1151323,1152378..1152543,1154716..1154855,1156721..1156822,1157317..1157512,1158643..1158807,1159425..1159600,1162412..1162534,1165153..1165345,1166201..1166305,1167275..1167397,1167761..1167856,1169117..1169227,1170347..1170547,1174031..1174284,1175342..1175522,1189277..1189467,1189977..1190106,1209637..1209748,1210616..1210764,1211797..1211981,1213041..1213161,1216013..1216141,1216832..1216957,1217467..1217718,1219595..1219795,1220151..1220276,1221715..1221852,1222558..1222623,1223541..1223711,1223811..1223972,1224328..1224386,1224558..1224696,1226143..1226330,1227106..1227259,1228176..1228317,1232016..1232267,1234054..1234248,1235300..1235419,1235668..1235840,1236420..1236578,1237041..1237182,1237943..1238103,1238525..1238624,1239455..1239603,1243344..1243388,1244404..1244499,1245642..1245788,1245879..1245962,1246421..1246519,1249312..1249436,1250176..1250242))
location: region:1133880-1250242:-1
so has part: feature:1250176-1250242:-1:exon
so has part: feature:1249312-1249436:-1:exon
so has part: feature:1246421-1246519:-1:exon
so has part: feature:1245879-1245962:-1:exon
so has part: feature:1245642-1245788:-1:exon
so has part: feature:1244404-1244499:-1:exon
so has part: feature:1243344-1243388:-1:exon
so has part: feature:1239455-1239603:-1:exon
so has part: feature:1238525-1238624:-1:exon
so has part: feature:1237943-1238103:-1:exon
so has part: feature:1237041-1237182:-1:exon
so has part: feature:1236420-1236578:-1:exon
so has part: feature:1235668-1235840:-1:exon
so has part: feature:1235300-1235419:-1:exon
so has part: feature:1234054-1234248:-1:exon
so has part: feature:1232016-1232267:-1:exon
so has part: feature:1228176-1228317:-1:exon
so has part: feature:1227106-1227259:-1:exon
so has part: feature:1226143-1226330:-1:exon
so has part: feature:1224558-1224696:-1:exon
so has part: feature:1224328-1224386:-1:exon
so has part: feature:1223811-1223972:-1:exon
so has part: feature:1223541-1223711:-1:exon
so has part: feature:1222558-1222623:-1:exon
so has part: feature:1221715-1221852:-1:exon
so has part: feature:1220151-1220276:-1:exon
so has part: feature:1219595-1219795:-1:exon
so has part: feature:1217467-1217718:-1:exon
so has part: feature:1216832-1216957:-1:exon
so has part: feature:1216013-1216141:-1:exon
so has part: feature:1213041-1213161:-1:exon
so has part: feature:1211797-1211981:-1:exon
so has part: feature:1210616-1210764:-1:exon
so has part: feature:1209637-1209748:-1:exon
so has part: feature:1189977-1190106:-1:exon
so has part: feature:1189277-1189467:-1:exon
so has part: feature:1175342-1175522:-1:exon
so has part: feature:1174031-1174284:-1:exon
so has part: feature:1170347-1170547:-1:exon
so has part: feature:1169117-1169227:-1:exon
so has part: feature:1167761-1167856:-1:exon
so has part: feature:1167275-1167397:-1:exon
so has part: feature:1166201-1166305:-1:exon
so has part: feature:1165153-1165345:-1:exon
so has part: feature:1162412-1162534:-1:exon
so has part: feature:1159425-1159600:-1:exon
so has part: feature:1158643-1158807:-1:exon
so has part: feature:1157317-1157512:-1:exon
so has part: feature:1156721-1156822:-1:exon
so has part: feature:1154716-1154855:-1:exon
so has part: feature:1152378-1152543:-1:exon
so has part: feature:1151163-1151323:-1:exon
so has part: feature:1139393-1139554:-1:exon
so has part: feature:1133880-1135240:-1:exon

position:1250242:-1
position: 1250242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1250176-1250242:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1249312-1249436:-1:exon

position:1249436:-1
position: 1249436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1246421-1246519:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1245879-1245962:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1245642-1245788:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1244404-1244499:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1243344-1243388:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1239455-1239603:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1238525-1238624:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1237943-1238103:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1237041-1237182:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1236420-1236578:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1235668-1235840:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1235300-1235419:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1234054-1234248:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1232016-1232267:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1228176-1228317:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1227106-1227259:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1226143-1226330:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1224558-1224696:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1224328-1224386:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1223811-1223972:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1223541-1223711:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1222558-1222623:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1221715-1221852:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1220151-1220276:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1219595-1219795:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1217467-1217718:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1216832-1216957:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1216013-1216141:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1213041-1213161:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1211797-1211981:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1210616-1210764:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1209637-1209748:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1189977-1190106:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1189277-1189467:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1175342-1175522:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1174031-1174284:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1170347-1170547:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1169117-1169227:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1167761-1167856:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1167275-1167397:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1166201-1166305:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1165153-1165345:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1162412-1162534:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1159425-1159600:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1158643-1158807:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1157317-1157512:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1156721-1156822:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1154716-1154855:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1152378-1152543:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1151163-1151323:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1139393-1139554:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1133880-1135240:-1:exon

ITPR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: ITPR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol 1,4,5-trisphosphate receptor type 1 isoform X3
translation: MTDKMSSFLHIGDICSLYAEGSTNGFISTLGLVDDRCVVQPEAGDLNNPPKKFRDCLFKLCPMNRYSAQKQFWKAAKPGANSTTDAVLLNKLHHAADLEKKQNETENRKLLGTVIQYGNVIQLLHLKSNKYLTVNKRLPALLEKNAMRVTLDEAGNEGSWFYIQPFYKLRSIGDSVVIGDKVVLNPVNAGQPLHASSHQLVDNPGCNEVNSVNCNTSWKIVLFMKWSDNKDDILKGGDVVRLFHAEQEKFLTCDEHRKKQHVFLRTTGRQSATSATSSKALWEVEVVQHDPCRGGAGYWNSLFRFKHLATGHYLAAELDPEQEARRGRGSQEKMAYSLVSVPEGNDISSIFELDPTTLRGGDSLVPRNSYVRLRHLCTNTWVHSTNIPIDKEEEKPVMLKIGTSPVKEDKEAFAIVPVSPAEVRDLDFANDASKVLGSIAGKLEKGTITQNERRSVTKLLEDLVYFVTGGTNSGQDVLEVVFSKPNRERQKLMREQNILKQIFKLLQAPFTDSGDGPMLRLEELGDQRHAPFRHICRLCYRVLRHSQQDYRKNQEYIAKQFGFMQKQIGYDVLAEDTITALLHNNRKLLEKHITAAEIDTFVSLVRKNREPRFLDYLSDLCVSMNKSIPVTQELICKAVLNPANADILIETKLVLSRFEFEEVSSGDNALEVGEDEEEVWLFWRDSSKEIRSKSIRELAQDAKEGQKEDRDVLSYYRYQLNLFARMCLDRQYLAINEISGQLDVDLILRCMADENLPYELRASFCRLMLHMHVDRDPQEQVTPVKYARLWSEIPSEIAIDDYDSSGTSKDEIKERFAQTMEFVEEYLRDVVCQRFPFSDKEKNKLTFEVVNLARNLIYFGFYNFCDLLRLTKILLAILDCVHITTIFPITKMAKGEESKGSNVMRSIHGVGELMTQVVLRGGGFLPMTPLAAAPEGNVKQSEPEKEDILVMDTKLKIIEILQFILNVRLDYRISCLLCIFKHEFDESNAQMSESPTGSSSQEMPANVPGALDFEHIEEQAEGIFGGRKENTPLDLDDHGGRTFLRVLLHLTMHDYPPLVSGALQLLFRHFSQRQEVLQAFKQVQLLVTSQDVDNYKQIKQDLDQLRSIVEKSELWVYKGQGPDEAMDSVPGENEHKKKEEGHSKSQKPESTSSYNYRVVKEILLRLSKLCVQEGASVRKSRKQQQRLLRNMGAHAVVLELLQIPYEKAEDTRMQEIMKLAHEFLQNFCAGNQQNQALLHKHINLFLNPGILEAVTMQHIFMNNFQLCSEINERVVQHFVHCIETHGRNVQYIKFLQTIVKAEGKFIKKCQDMVMAELVNAGEDVLVFYNDRASFQTLVQMMRSERDRMDENSPLMYHIHLVELLAVCTEGKNVYTEIKCNSLLPLDDIVRVVTHEDCIPEVKIAYINFLNHCYVDTEVEMKEIYTSNHMWKLFENFLVDICRACNNTSDRKHADSILEKYVTEIVMSIVTTFFSSPFSDQSTTLQTRQPVFVQLLQGVFRVYHCTWLMPSQKASVESCIRVLSDVAKSRAIAIPVDLDSQVNNLFLKSHNLVQKTAMNWRLSARNAARRDSVLAASRDYRNIIERLQDIVSALEDRLRPLVQAELSVLVDVLHRPELLFPENTDARRKCESGGFICKLIKHTKQLLEENEEKLCIKVLQTLREMMTKDRGYGEKGEALRQVLVSRYYGTARAAGRRESLTAFNGPLASGSSSKAGPAGGSSGSSSMSRGEMSLADVQCHLDKEGASNLVIDLIMNATSDRVFHESILLAIALLEGGNTTIQHSFFCRLTEDKKSEKFFKVFYDRMKVAQQEIKATVTVNTSDLGNKKKDEDSDRDVPNRKRVREPMTQITEEVRDQLLEASAATRKAYSAYRREADPEEHFSAGEGAQAAADKSKDELEMSAVISIMQPILRFLQLLCENHNRDLQNFLRCQNNKTNYNLVCETLQFLDCICGSTTGGLGLLGLYINEKNVALINQTLESLTEYCQGPCHENQNCIATHE…
SIO_010081: ITPR1
subclass of: SO_0000673
so part of: ITPR1
location: complement(join(1135151..1135240,1139393..1139554,1151163..1151323,1152378..1152543,1154716..1154855,1156721..1156822,1157317..1157512,1158643..1158807,1159425..1159600,1162412..1162534,1165153..1165345,1166201..1166305,1167275..1167397,1167761..1167856,1169117..1169227,1170347..1170547,1174031..1174284,1175342..1175522,1189277..1189467,1189977..1190106,1209637..1209748,1210616..1210764,1211797..1211981,1213041..1213161,1216013..1216141,1216832..1216957,1217467..1217718,1219595..1219795,1220151..1220276,1221715..1221852,1222558..1222623,1223541..1223711,1223811..1223972,1224328..1224386,1224558..1224696,1226143..1226330,1227106..1227259,1228176..1228317,1232016..1232267,1234054..1234248,1235300..1235419,1235668..1235840,1236420..1236578,1237041..1237182,1237943..1238103,1238525..1238624,1239455..1239603,1244404..1244499,1245642..1245788,1245879..1245962,1246421..1246519,1249312..1249470,1250176..1250262,1253590..1253705,1280669..1280739,1284289..1284380))
location: region:1135151-1284380:-1
so has part: feature:1284289-1284380:-1:exon
so has part: feature:1280669-1280739:-1:exon
so has part: feature:1253590-1253705:-1:exon
so has part: feature:1250176-1250262:-1:exon
so has part: feature:1249312-1249470:-1:exon
so has part: feature:1246421-1246519:-1:exon
so has part: feature:1245879-1245962:-1:exon
so has part: feature:1245642-1245788:-1:exon
so has part: feature:1244404-1244499:-1:exon
so has part: feature:1239455-1239603:-1:exon
so has part: feature:1238525-1238624:-1:exon
so has part: feature:1237943-1238103:-1:exon
so has part: feature:1237041-1237182:-1:exon
so has part: feature:1236420-1236578:-1:exon
so has part: feature:1235668-1235840:-1:exon
so has part: feature:1235300-1235419:-1:exon
so has part: feature:1234054-1234248:-1:exon
so has part: feature:1232016-1232267:-1:exon
so has part: feature:1228176-1228317:-1:exon
so has part: feature:1227106-1227259:-1:exon
so has part: feature:1226143-1226330:-1:exon
so has part: feature:1224558-1224696:-1:exon
so has part: feature:1224328-1224386:-1:exon
so has part: feature:1223811-1223972:-1:exon
so has part: feature:1223541-1223711:-1:exon
so has part: feature:1222558-1222623:-1:exon
so has part: feature:1221715-1221852:-1:exon
so has part: feature:1220151-1220276:-1:exon
so has part: feature:1219595-1219795:-1:exon
so has part: feature:1217467-1217718:-1:exon
so has part: feature:1216832-1216957:-1:exon
so has part: feature:1216013-1216141:-1:exon
so has part: feature:1213041-1213161:-1:exon
so has part: feature:1211797-1211981:-1:exon
so has part: feature:1210616-1210764:-1:exon
so has part: feature:1209637-1209748:-1:exon
so has part: feature:1189977-1190106:-1:exon
so has part: feature:1189277-1189467:-1:exon
so has part: feature:1175342-1175522:-1:exon
so has part: feature:1174031-1174284:-1:exon
so has part: feature:1170347-1170547:-1:exon
so has part: feature:1169117-1169227:-1:exon
so has part: feature:1167761-1167856:-1:exon
so has part: feature:1167275-1167397:-1:exon
so has part: feature:1166201-1166305:-1:exon
so has part: feature:1165153-1165345:-1:exon
so has part: feature:1162412-1162534:-1:exon
so has part: feature:1159425-1159600:-1:exon
so has part: feature:1158643-1158807:-1:exon
so has part: feature:1157317-1157512:-1:exon
so has part: feature:1156721-1156822:-1:exon
so has part: feature:1154716-1154855:-1:exon
so has part: feature:1152378-1152543:-1:exon
so has part: feature:1151163-1151323:-1:exon
so has part: feature:1139393-1139554:-1:exon
so has part: feature:1135151-1135240:-1:exon

XP_056357236.1
type: Protein
SIO_000068: ncbiprotein

position:1135151:-1
position: 1135151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1284380:-1
position: 1284380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1284289-1284380:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1280669-1280739:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1253590-1253705:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1250176-1250262:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1249312-1249470:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1246421-1246519:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1245879-1245962:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1245642-1245788:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1244404-1244499:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1239455-1239603:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1238525-1238624:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1237943-1238103:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1237041-1237182:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1236420-1236578:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1235668-1235840:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1235300-1235419:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1234054-1234248:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1232016-1232267:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1228176-1228317:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1227106-1227259:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1226143-1226330:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1224558-1224696:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1224328-1224386:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1223811-1223972:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1223541-1223711:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1222558-1222623:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1221715-1221852:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1220151-1220276:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1219595-1219795:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1217467-1217718:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1216832-1216957:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1216013-1216141:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1213041-1213161:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1211797-1211981:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1210616-1210764:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1209637-1209748:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1189977-1190106:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1189277-1189467:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1175342-1175522:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1174031-1174284:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1170347-1170547:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1169117-1169227:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1167761-1167856:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1167275-1167397:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1166201-1166305:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1165153-1165345:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1162412-1162534:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1159425-1159600:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1158643-1158807:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1157317-1157512:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1156721-1156822:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1154716-1154855:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1152378-1152543:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1151163-1151323:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1139393-1139554:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1135151-1135240:-1:exon

ITPR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: ITPR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol 1,4,5-trisphosphate receptor type 1 isoform X1
translation: MTDKMSSFLHIGDICSLYAEGSTNGFISTLGLVDDRCVVQPEAGDLNNPPKKFRDCLFKLCPMNRYSAQKQFWKAAKPGANSTTDAVLLNKLHHAADLEKKQNETENRKLLGTVIQYGNVIQLLHLKSNKYLTVNKRLPALLEKNAMRVTLDEAGNEGSWFYIQPFYKLRSIGDSVVIGDKVVLNPVNAGQPLHASSHQLVDNPGCNEVNSVNCNTSWKIVLFMKWSDNKDDILKGGDVVRLFHAEQEKFLTCDEHRKKQHVFLRTTGRQSATSATSSKALWEVEVVQHDPCRGGAGYWNSLFRFKHLATGHYLAAEVNPDYEEDDLECQSSLDPEQEARRGRGSQEKMAYSLVSVPEGNDISSIFELDPTTLRGGDSLVPRNSYVRLRHLCTNTWVHSTNIPIDKEEEKPVMLKIGTSPVKEDKEAFAIVPVSPAEVRDLDFANDASKVLGSIAGKLEKGTITQNERRSVTKLLEDLVYFVTGGTNSGQDVLEVVFSKPNRERQKLMREQNILKQIFKLLQAPFTDSGDGPMLRLEELGDQRHAPFRHICRLCYRVLRHSQQDYRKNQEYIAKQFGFMQKQIGYDVLAEDTITALLHNNRKLLEKHITAAEIDTFVSLVRKNREPRFLDYLSDLCVSMNKSIPVTQELICKAVLNPANADILIETKLVLSRFEFEEVSSGDNALEVGEDEEEVWLFWRDSSKEIRSKSIRELAQDAKEGQKEDRDVLSYYRYQLNLFARMCLDRQYLAINEISGQLDVDLILRCMADENLPYELRASFCRLMLHMHVDRDPQEQVTPVKYARLWSEIPSEIAIDDYDSSGTSKDEIKERFAQTMEFVEEYLRDVVCQRFPFSDKEKNKLTFEVVNLARNLIYFGFYNFCDLLRLTKILLAILDCVHITTIFPITKMAKGEESKGSNVMRSIHGVGELMTQVVLRGGGFLPMTPLAAAPEGNVKQSEPEKEDILVMDTKLKIIEILQFILNVRLDYRISCLLCIFKHEFDESNAQMSESPTGSSSQEMPANVPGALDFEHIEEQAEGIFGGRKENTPLDLDDHGGRTFLRVLLHLTMHDYPPLVSGALQLLFRHFSQRQEVLQAFKQVQLLVTSQDVDNYKQIKQDLDQLRSIVEKSELWVYKGQGPDEAMDSVPGENEHKKKEEGHSKSQKPESTSSYNYRVVKEILLRLSKLCVQEGASVRKSRKQQQRLLRNMGAHAVVLELLQIPYEKAEDTRMQEIMKLAHEFLQNFCAGNQQNQALLHKHINLFLNPGILEAVTMQHIFMNNFQLCSEINERVVQHFVHCIETHGRNVQYIKFLQTIVKAEGKFIKKCQDMVMAELVNAGEDVLVFYNDRASFQTLVQMMRSERDRMDENSPLMYHIHLVELLAVCTEGKNVYTEIKCNSLLPLDDIVRVVTHEDCIPEVKIAYINFLNHCYVDTEVEMKEIYTSNHMWKLFENFLVDICRACNNTSDRKHADSILEKYVTEIVMSIVTTFFSSPFSDQSTTLQTRQPVFVQLLQGVFRVYHCTWLMPSQKASVESCIRVLSDVAKSRAIAIPVDLDSQVNNLFLKSHNLVQKTAMNWRLSARNAARRDSVLAASRDYRNIIERLQDIVSALEDRLRPLVQAELSVLVDVLHRPELLFPENTDARRKCESGGFICKLIKHTKQLLEENEEKLCIKVLQTLREMMTKDRGYGEKGEALRQVLVSRYYGTARAAGRRESLTAFNGPLASGSSSKAGPAGGSSGSSSMSRGEMSLADVQCHLDKEGASNLVIDLIMNATSDRVFHESILLAIALLEGGNTTIQHSFFCRLTEDKKSEKFFKVFYDRMKVAQQEIKATVTVNTSDLGNKKKDEDSDRDVPNRKRVREPMTQITEEVRDQLLEASAATRKAYSAYRREADPEEHFSAGEGAQAAADKSKDELEMSAVISIMQPILRFLQLLCENHNRDLQNFLRCQNNKTNYNLVCETLQFLDCICGSTTGGLGLLGLYINEKNVALINQTLESLTEYC…
SIO_010081: ITPR1
subclass of: SO_0000673
so part of: ITPR1
location: complement(join(1135151..1135240,1139393..1139554,1151163..1151323,1152378..1152543,1154716..1154855,1156721..1156822,1157317..1157512,1158643..1158807,1159425..1159600,1162412..1162534,1165153..1165345,1166201..1166305,1167275..1167397,1167761..1167856,1169117..1169227,1170347..1170547,1174031..1174284,1175342..1175522,1189277..1189467,1189977..1190106,1209637..1209748,1210616..1210764,1211797..1211981,1213041..1213161,1216013..1216141,1216832..1216957,1217467..1217718,1219595..1219795,1220151..1220276,1221715..1221852,1222558..1222623,1223541..1223711,1223811..1223972,1224328..1224386,1224558..1224696,1226143..1226330,1227106..1227259,1228176..1228317,1232016..1232267,1234054..1234248,1235300..1235419,1235668..1235840,1236420..1236578,1237041..1237182,1237943..1238103,1238525..1238624,1239455..1239603,1243344..1243388,1244404..1244499,1245642..1245788,1245879..1245962,1246421..1246519,1249312..1249470,1250176..1250262,1253590..1253705,1280669..1280739,1284289..1284380))
location: region:1135151-1284380:-1
so has part: feature:1284289-1284380:-1:exon
so has part: feature:1280669-1280739:-1:exon
so has part: feature:1253590-1253705:-1:exon
so has part: feature:1250176-1250262:-1:exon
so has part: feature:1249312-1249470:-1:exon
so has part: feature:1246421-1246519:-1:exon
so has part: feature:1245879-1245962:-1:exon
so has part: feature:1245642-1245788:-1:exon
so has part: feature:1244404-1244499:-1:exon
so has part: feature:1243344-1243388:-1:exon
so has part: feature:1239455-1239603:-1:exon
so has part: feature:1238525-1238624:-1:exon
so has part: feature:1237943-1238103:-1:exon
so has part: feature:1237041-1237182:-1:exon
so has part: feature:1236420-1236578:-1:exon
so has part: feature:1235668-1235840:-1:exon
so has part: feature:1235300-1235419:-1:exon
so has part: feature:1234054-1234248:-1:exon
so has part: feature:1232016-1232267:-1:exon
so has part: feature:1228176-1228317:-1:exon
so has part: feature:1227106-1227259:-1:exon
so has part: feature:1226143-1226330:-1:exon
so has part: feature:1224558-1224696:-1:exon
so has part: feature:1224328-1224386:-1:exon
so has part: feature:1223811-1223972:-1:exon
so has part: feature:1223541-1223711:-1:exon
so has part: feature:1222558-1222623:-1:exon
so has part: feature:1221715-1221852:-1:exon
so has part: feature:1220151-1220276:-1:exon
so has part: feature:1219595-1219795:-1:exon
so has part: feature:1217467-1217718:-1:exon
so has part: feature:1216832-1216957:-1:exon
so has part: feature:1216013-1216141:-1:exon
so has part: feature:1213041-1213161:-1:exon
so has part: feature:1211797-1211981:-1:exon
so has part: feature:1210616-1210764:-1:exon
so has part: feature:1209637-1209748:-1:exon
so has part: feature:1189977-1190106:-1:exon
so has part: feature:1189277-1189467:-1:exon
so has part: feature:1175342-1175522:-1:exon
so has part: feature:1174031-1174284:-1:exon
so has part: feature:1170347-1170547:-1:exon
so has part: feature:1169117-1169227:-1:exon
so has part: feature:1167761-1167856:-1:exon
so has part: feature:1167275-1167397:-1:exon
so has part: feature:1166201-1166305:-1:exon
so has part: feature:1165153-1165345:-1:exon
so has part: feature:1162412-1162534:-1:exon
so has part: feature:1159425-1159600:-1:exon
so has part: feature:1158643-1158807:-1:exon
so has part: feature:1157317-1157512:-1:exon
so has part: feature:1156721-1156822:-1:exon
so has part: feature:1154716-1154855:-1:exon
so has part: feature:1152378-1152543:-1:exon
so has part: feature:1151163-1151323:-1:exon
so has part: feature:1139393-1139554:-1:exon
so has part: feature:1135151-1135240:-1:exon

XP_056357234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1284289-1284380:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1280669-1280739:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1253590-1253705:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1250176-1250262:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1249312-1249470:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1246421-1246519:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1245879-1245962:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1245642-1245788:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1244404-1244499:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1243344-1243388:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1239455-1239603:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1238525-1238624:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1237943-1238103:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1237041-1237182:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1236420-1236578:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1235668-1235840:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1235300-1235419:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1234054-1234248:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1232016-1232267:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1228176-1228317:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1227106-1227259:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1226143-1226330:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1224558-1224696:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1224328-1224386:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1223811-1223972:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1223541-1223711:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1222558-1222623:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1221715-1221852:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1220151-1220276:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1219595-1219795:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1217467-1217718:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1216832-1216957:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1216013-1216141:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1213041-1213161:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1211797-1211981:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1210616-1210764:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1209637-1209748:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1189977-1190106:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1189277-1189467:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1175342-1175522:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1174031-1174284:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1170347-1170547:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1169117-1169227:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1167761-1167856:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1167275-1167397:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1166201-1166305:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1165153-1165345:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1162412-1162534:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1159425-1159600:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1158643-1158807:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1157317-1157512:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1156721-1156822:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1154716-1154855:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1152378-1152543:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1151163-1151323:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1139393-1139554:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:1135151-1135240:-1:exon

ITPR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: ITPR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol 1,4,5-trisphosphate receptor type 1 isoform X5
translation: MTDKMSSFLHIGDICSLYAEGSTNGFISTLGLVDDRCVVQPEAGDLNNPPKKFRDCLFKLCPMNRYSAQKQFWKAAKPGANSTTDAVLLNKLHHAADLEKKQNETENRKLLGTVIQYGNVIQLLHLKSNKYLTVNKRLPALLEKNAMRVTLDEAGNEGSWFYIQPFYKLRSIGDSVVIGDKVVLNPVNAGQPLHASSHQLVDNPGCNEVNSVNCNTSWKIVLFMKWSDNKDDILKGGDVVRLFHAEQEKFLTCDEHRKKQHVFLRTTGRQSATSATSSKALWEVEVVQHDPCRGGAGYWNSLFRFKHLATGHYLAAEVNPDYEEDDLECQSSLDPEQEARRGRGSQEKMAYSLVSVPEGNDISSIFELDPTTLRGGDSLVPRNSYVRLRHLCTNTWVHSTNIPIDKEEEKPVMLKIGTSPVKEDKEAFAIVPVSPAEVRDLDFANDASKVLGSIAGKLEKGTITQNERRSVTKLLEDLVYFVTGGTNSGQDVLEVVFSKPNRERQKLMREQNILKQIFKLLQAPFTDSGDGPMLRLEELGDQRHAPFRHICRLCYRVLRHSQQDYRKNQEYIAKQFGFMQKQIGYDVLAEDTITALLHNNRKLLEKHITAAEIDTFVSLVRKNREPRFLDYLSDLCVSMNKSIPVTQELICKAVLNPANADILIETKLVLSRFEFEEVSSGDNALEVGEDEEEVWLFWRDSSKEIRSKSIRELAQDAKEGQKEDRDVLSYYRYQLNLFARMCLDRQYLAINEISGQLDVDLILRCMADENLPYELRASFCRLMLHMHVDRDPQEQVTPVKYARLWSEIPSEIAIDDYDSSGTSKDEIKERFAQTMEFVEEYLRDVVCQRFPFSDKEKNKLTFEVVNLARNLIYFGFYNFCDLLRLTKILLAILDCVHITTIFPITKMAKGEESKGSNVMRSIHGVGELMTQVVLRGGGFLPMTPLAAAPEGNVKQSEPEKEDILVMDTKLKIIEILQFILNVRLDYRISCLLCIFKHEFDESNAQMSESPTGSSSQEMPANVPGALDFEHIEEQAEGIFGGRKENTPLDLDDHGGRTFLRVLLHLTMHDYPPLVSGALQLLFRHFSQRQEVLQAFKQVQLLVTSQDVDNYKQIKQDLDQLRSIVEKSELWVYKGQGPDEAMDSVPGENEHKKKEEGHSKSQKPESTSSYNYRVVKEILLRLSKLCVQEGASVRKSRKQQQRLLRNMGAHAVVLELLQIPYEKAEDTRMQEIMKLAHEFLQNFCAGNQQNQALLHKHINLFLNPGILEAVTMQHIFMNNFQLCSEINERVVQHFVHCIETHGRNVQYIKFLQTIVKAEGKFIKKCQDMVMAELVNAGEDVLVFYNDRASFQTLVQMMRSERDRMDENSPLMYHIHLVELLAVCTEGKNVYTEIKCNSLLPLDDIVRVVTHEDCIPEVKIAYINFLNHCYVDTEVEMKEIYTSNHMWKLFENFLVDICRACNNTSDRKHADSILEKYVTEIVMSIVTTFFSSPFSDQSTTLQTRQPVFVQLLQGVFRVYHCTWLMPSQKASVESCIRVLSDVAKSRAIAIPVDLDSQVNNLFLKSHNLVQKTAMNWRLSARNAARRDSVLAASRDYRNIIERLQDIVSALEDRLRPLVQAELSVLVDVLHRPELLFPENTDARRKCESGGFICKLIKHTKQLLEENEEKLCIKVLQTLREMMTKDRGYGEKITIELDNAELPQAPETESPVEQEIDQTLPQRQLEDHRRGEALRQVLVSRYYGTARAAGRRESLTAFNGPLASGSSSKAGPAGGSSGSSSMSRGEMSLADVQCHLDKEGASNLVIDLIMNATSDRVFHESILLAIALLEGGNTTIQHSFFCRLTEDKKSEKFFKVFYDRMKVAQQEIKATVTVNTSDLGNKKKDEDSDRDVPNRKRVREPMTQITEEVRDQLLEASAATRKAYSAYRREADPEEHFSAGEGAQAAADKSKDELEMSAVISIMQPILRFLQLLCENHNRDLQNFLRCQNNKTNYNLVCETLQF…
SIO_010081: ITPR1
subclass of: SO_0000673
so part of: ITPR1
location: complement(join(1135151..1135240,1139393..1139554,1151163..1151323,1152378..1152543,1154716..1154855,1156721..1156822,1157317..1157512,1158643..1158807,1159425..1159600,1162412..1162534,1165153..1165345,1166201..1166305,1167275..1167397,1167761..1167856,1169117..1169227,1170347..1170547,1174031..1174284,1175342..1175522,1189277..1189467,1189977..1190106,1194881..1194931,1196374..1196409,1205627..1205653,1209637..1209748,1210616..1210764,1211797..1211981,1213041..1213161,1216013..1216141,1216832..1216957,1217467..1217718,1219595..1219795,1220151..1220276,1221715..1221852,1222558..1222623,1223541..1223711,1223811..1223972,1224328..1224386,1224558..1224696,1226143..1226330,1227106..1227259,1228176..1228317,1232016..1232267,1234054..1234248,1235300..1235419,1235668..1235840,1236420..1236578,1237041..1237182,1237943..1238103,1238525..1238624,1239455..1239603,1243344..1243388,1244404..1244499,1245642..1245788,1245879..1245962,1246421..1246519,1249312..1249470,1250176..1250262,1253590..1253705,1280669..1280739,1284289..1284380))
location: region:1135151-1284380:-1
so has part: feature:1284289-1284380:-1:exon
so has part: feature:1280669-1280739:-1:exon
so has part: feature:1253590-1253705:-1:exon
so has part: feature:1250176-1250262:-1:exon
so has part: feature:1249312-1249470:-1:exon
so has part: feature:1246421-1246519:-1:exon
so has part: feature:1245879-1245962:-1:exon
so has part: feature:1245642-1245788:-1:exon
so has part: feature:1244404-1244499:-1:exon
so has part: feature:1243344-1243388:-1:exon
so has part: feature:1239455-1239603:-1:exon
so has part: feature:1238525-1238624:-1:exon
so has part: feature:1237943-1238103:-1:exon
so has part: feature:1237041-1237182:-1:exon
so has part: feature:1236420-1236578:-1:exon
so has part: feature:1235668-1235840:-1:exon
so has part: feature:1235300-1235419:-1:exon
so has part: feature:1234054-1234248:-1:exon
so has part: feature:1232016-1232267:-1:exon
so has part: feature:1228176-1228317:-1:exon
so has part: feature:1227106-1227259:-1:exon
so has part: feature:1226143-1226330:-1:exon
so has part: feature:1224558-1224696:-1:exon
so has part: feature:1224328-1224386:-1:exon
so has part: feature:1223811-1223972:-1:exon
so has part: feature:1223541-1223711:-1:exon
so has part: feature:1222558-1222623:-1:exon
so has part: feature:1221715-1221852:-1:exon
so has part: feature:1220151-1220276:-1:exon
so has part: feature:1219595-1219795:-1:exon
so has part: feature:1217467-1217718:-1:exon
so has part: feature:1216832-1216957:-1:exon
so has part: feature:1216013-1216141:-1:exon
so has part: feature:1213041-1213161:-1:exon
so has part: feature:1211797-1211981:-1:exon
so has part: feature:1210616-1210764:-1:exon
so has part: feature:1209637-1209748:-1:exon
so has part: feature:1205627-1205653:-1:exon
so has part: feature:1196374-1196409:-1:exon
so has part: feature:1194881-1194931:-1:exon
so has part: feature:1189977-1190106:-1:exon
so has part: feature:1189277-1189467:-1:exon
so has part: feature:1175342-1175522:-1:exon
so has part: feature:1174031-1174284:-1:exon
so has part: feature:1170347-1170547:-1:exon
so has part: feature:1169117-1169227:-1:exon
so has part: feature:1167761-1167856:-1:exon
so has part: feature:1167275-1167397:-1:exon
so has part: feature:1166201-1166305:-1:exon
so has part: feature:1165153-1165345:-1:exon
so has part: feature:1162412-1162534:-1:exon
so has part: feature:1159425-1159600:-1:exon
so has part: feature:1158643-1158807:-1:exon
so has part: feature:1157317-1157512:-1:exon
so has part: feature:1156721-1156822:-1:exon
so has part: feature:1154716-1154855:-1:exon
so has part: feature:1152378-1152543:-1:exon
so has part: feature:1151163-1151323:-1:exon
so has part: feature:1139393-1139554:-1:exon
so has part: feature:1135151-1135240:-1:exon

XP_056357238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1284289-1284380:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1280669-1280739:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1253590-1253705:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1250176-1250262:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1249312-1249470:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1246421-1246519:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1245879-1245962:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1245642-1245788:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1244404-1244499:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1243344-1243388:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1239455-1239603:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1238525-1238624:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1237943-1238103:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1237041-1237182:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1236420-1236578:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1235668-1235840:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1235300-1235419:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1234054-1234248:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1232016-1232267:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1228176-1228317:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1227106-1227259:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1226143-1226330:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1224558-1224696:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1224328-1224386:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1223811-1223972:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1223541-1223711:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1222558-1222623:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1221715-1221852:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1220151-1220276:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1219595-1219795:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1217467-1217718:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1216832-1216957:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1216013-1216141:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1213041-1213161:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1211797-1211981:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1210616-1210764:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1209637-1209748:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1205627-1205653:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1196374-1196409:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1194881-1194931:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1189977-1190106:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1189277-1189467:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1175342-1175522:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1174031-1174284:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1170347-1170547:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1169117-1169227:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1167761-1167856:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1167275-1167397:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1166201-1166305:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1165153-1165345:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1162412-1162534:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1159425-1159600:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1158643-1158807:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1157317-1157512:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1156721-1156822:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1154716-1154855:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:1152378-1152543:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:1151163-1151323:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:1139393-1139554:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:1135151-1135240:-1:exon

ITPR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: ITPR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol 1,4,5-trisphosphate receptor type 1 isoform X2
translation: MIYYRKEKKIWDAARKERSLVDDRCVVQPEAGDLNNPPKKFRDCLFKLCPMNRYSAQKQFWKAAKPGANSTTDAVLLNKLHHAADLEKKQNETENRKLLGTVIQYGNVIQLLHLKSNKYLTVNKRLPALLEKNAMRVTLDEAGNEGSWFYIQPFYKLRSIGDSVVIGDKVVLNPVNAGQPLHASSHQLVDNPGCNEVNSVNCNTSWKIVLFMKWSDNKDDILKGGDVVRLFHAEQEKFLTCDEHRKKQHVFLRTTGRQSATSATSSKALWEVEVVQHDPCRGGAGYWNSLFRFKHLATGHYLAAEVNPDYEEDDLECQSSLDPEQEARRGRGSQEKMAYSLVSVPEGNDISSIFELDPTTLRGGDSLVPRNSYVRLRHLCTNTWVHSTNIPIDKEEEKPVMLKIGTSPVKEDKEAFAIVPVSPAEVRDLDFANDASKVLGSIAGKLEKGTITQNERRSVTKLLEDLVYFVTGGTNSGQDVLEVVFSKPNRERQKLMREQNILKQIFKLLQAPFTDSGDGPMLRLEELGDQRHAPFRHICRLCYRVLRHSQQDYRKNQEYIAKQFGFMQKQIGYDVLAEDTITALLHNNRKLLEKHITAAEIDTFVSLVRKNREPRFLDYLSDLCVSMNKSIPVTQELICKAVLNPANADILIETKLVLSRFEFEEVSSGDNALEVGEDEEEVWLFWRDSSKEIRSKSIRELAQDAKEGQKEDRDVLSYYRYQLNLFARMCLDRQYLAINEISGQLDVDLILRCMADENLPYELRASFCRLMLHMHVDRDPQEQVTPVKYARLWSEIPSEIAIDDYDSSGTSKDEIKERFAQTMEFVEEYLRDVVCQRFPFSDKEKNKLTFEVVNLARNLIYFGFYNFCDLLRLTKILLAILDCVHITTIFPITKMAKGEESKGSNVMRSIHGVGELMTQVVLRGGGFLPMTPLAAAPEGNVKQSEPEKEDILVMDTKLKIIEILQFILNVRLDYRISCLLCIFKHEFDESNAQMSESPTGSSSQEMPANVPGALDFEHIEEQAEGIFGGRKENTPLDLDDHGGRTFLRVLLHLTMHDYPPLVSGALQLLFRHFSQRQEVLQAFKQVQLLVTSQDVDNYKQIKQDLDQLRSIVEKSELWVYKGQGPDEAMDSVPGENEHKKKEEGHSKSQKPESTSSYNYRVVKEILLRLSKLCVQEGASVRKSRKQQQRLLRNMGAHAVVLELLQIPYEKAEDTRMQEIMKLAHEFLQNFCAGNQQNQALLHKHINLFLNPGILEAVTMQHIFMNNFQLCSEINERVVQHFVHCIETHGRNVQYIKFLQTIVKAEGKFIKKCQDMVMAELVNAGEDVLVFYNDRASFQTLVQMMRSERDRMDENSPLMYHIHLVELLAVCTEGKNVYTEIKCNSLLPLDDIVRVVTHEDCIPEVKIAYINFLNHCYVDTEVEMKEIYTSNHMWKLFENFLVDICRACNNTSDRKHADSILEKYVTEIVMSIVTTFFSSPFSDQSTTLQTRQPVFVQLLQGVFRVYHCTWLMPSQKASVESCIRVLSDVAKSRAIAIPVDLDSQVNNLFLKSHNLVQKTAMNWRLSARNAARRDSVLAASRDYRNIIERLQDIVSALEDRLRPLVQAELSVLVDVLHRPELLFPENTDARRKCESGGFICKLIKHTKQLLEENEEKLCIKVLQTLREMMTKDRGYGEKGEALRQVLVSRYYGTARAAGRRESLTAFNGPLASGSSSKAGPAGGSSGSSSMSRGEMSLADVQCHLDKEGASNLVIDLIMNATSDRVFHESILLAIALLEGGNTTIQHSFFCRLTEDKKSEKFFKVFYDRMKVAQQEIKATVTVNTSDLGNKKKDEDSDRDVPNRKRVREPMTQITEEVRDQLLEASAATRKAYSAYRREADPEEHFSAGEGAQAAADKSKDELEMSAVISIMQPILRFLQLLCENHNRDLQNFLRCQNNKTNYNLVCETLQFLDCICGSTTGGLGLLGLYINEKNVALINQTLESLTEYCQGPCHENQNCIA…
SIO_010081: ITPR1
subclass of: SO_0000673
so part of: ITPR1
location: complement(join(1135151..1135240,1139393..1139554,1151163..1151323,1152378..1152543,1154716..1154855,1156721..1156822,1157317..1157512,1158643..1158807,1159425..1159600,1162412..1162534,1165153..1165345,1166201..1166305,1167275..1167397,1167761..1167856,1169117..1169227,1170347..1170547,1174031..1174284,1175342..1175522,1189277..1189467,1189977..1190106,1209637..1209748,1210616..1210764,1211797..1211981,1213041..1213161,1216013..1216141,1216832..1216957,1217467..1217718,1219595..1219795,1220151..1220276,1221715..1221852,1222558..1222623,1223541..1223711,1223811..1223972,1224328..1224386,1224558..1224696,1226143..1226330,1227106..1227259,1228176..1228317,1232016..1232267,1234054..1234248,1235300..1235419,1235668..1235840,1236420..1236578,1237041..1237182,1237943..1238103,1238525..1238624,1239455..1239603,1243344..1243388,1244404..1244499,1245642..1245788,1245879..1245962,1246421..1246519,1249312..1249470,1250176..1250262,1253590..1253705,1280669..1280739,1283029..1283084))
location: region:1135151-1283084:-1
so has part: feature:1283029-1283084:-1:exon
so has part: feature:1280669-1280739:-1:exon
so has part: feature:1253590-1253705:-1:exon
so has part: feature:1250176-1250262:-1:exon
so has part: feature:1249312-1249470:-1:exon
so has part: feature:1246421-1246519:-1:exon
so has part: feature:1245879-1245962:-1:exon
so has part: feature:1245642-1245788:-1:exon
so has part: feature:1244404-1244499:-1:exon
so has part: feature:1243344-1243388:-1:exon
so has part: feature:1239455-1239603:-1:exon
so has part: feature:1238525-1238624:-1:exon
so has part: feature:1237943-1238103:-1:exon
so has part: feature:1237041-1237182:-1:exon
so has part: feature:1236420-1236578:-1:exon
so has part: feature:1235668-1235840:-1:exon
so has part: feature:1235300-1235419:-1:exon
so has part: feature:1234054-1234248:-1:exon
so has part: feature:1232016-1232267:-1:exon
so has part: feature:1228176-1228317:-1:exon
so has part: feature:1227106-1227259:-1:exon
so has part: feature:1226143-1226330:-1:exon
so has part: feature:1224558-1224696:-1:exon
so has part: feature:1224328-1224386:-1:exon
so has part: feature:1223811-1223972:-1:exon
so has part: feature:1223541-1223711:-1:exon
so has part: feature:1222558-1222623:-1:exon
so has part: feature:1221715-1221852:-1:exon
so has part: feature:1220151-1220276:-1:exon
so has part: feature:1219595-1219795:-1:exon
so has part: feature:1217467-1217718:-1:exon
so has part: feature:1216832-1216957:-1:exon
so has part: feature:1216013-1216141:-1:exon
so has part: feature:1213041-1213161:-1:exon
so has part: feature:1211797-1211981:-1:exon
so has part: feature:1210616-1210764:-1:exon
so has part: feature:1209637-1209748:-1:exon
so has part: feature:1189977-1190106:-1:exon
so has part: feature:1189277-1189467:-1:exon
so has part: feature:1175342-1175522:-1:exon
so has part: feature:1174031-1174284:-1:exon
so has part: feature:1170347-1170547:-1:exon
so has part: feature:1169117-1169227:-1:exon
so has part: feature:1167761-1167856:-1:exon
so has part: feature:1167275-1167397:-1:exon
so has part: feature:1166201-1166305:-1:exon
so has part: feature:1165153-1165345:-1:exon
so has part: feature:1162412-1162534:-1:exon
so has part: feature:1159425-1159600:-1:exon
so has part: feature:1158643-1158807:-1:exon
so has part: feature:1157317-1157512:-1:exon
so has part: feature:1156721-1156822:-1:exon
so has part: feature:1154716-1154855:-1:exon
so has part: feature:1152378-1152543:-1:exon
so has part: feature:1151163-1151323:-1:exon
so has part: feature:1139393-1139554:-1:exon
so has part: feature:1135151-1135240:-1:exon

XP_056357235.1
type: Protein
SIO_000068: ncbiprotein

position:1283084:-1
position: 1283084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1283029-1283084:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1280669-1280739:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1253590-1253705:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1250176-1250262:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1249312-1249470:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1246421-1246519:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1245879-1245962:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1245642-1245788:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1244404-1244499:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1243344-1243388:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1239455-1239603:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1238525-1238624:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1237943-1238103:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1237041-1237182:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1236420-1236578:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1235668-1235840:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1235300-1235419:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1234054-1234248:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1232016-1232267:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1228176-1228317:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1227106-1227259:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1226143-1226330:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1224558-1224696:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1224328-1224386:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1223811-1223972:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1223541-1223711:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1222558-1222623:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1221715-1221852:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1220151-1220276:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1219595-1219795:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1217467-1217718:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1216832-1216957:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1216013-1216141:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1213041-1213161:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1211797-1211981:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1210616-1210764:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1209637-1209748:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1189977-1190106:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1189277-1189467:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1175342-1175522:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1174031-1174284:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1170347-1170547:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1169117-1169227:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1167761-1167856:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1167275-1167397:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1166201-1166305:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1165153-1165345:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1162412-1162534:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1159425-1159600:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1158643-1158807:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1157317-1157512:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1156721-1156822:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1154716-1154855:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1152378-1152543:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1151163-1151323:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1139393-1139554:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:1135151-1135240:-1:exon

ITPR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: ITPR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol 1,4,5-trisphosphate receptor type 1 isoform X4
translation: MRVTLDEAGNEGSWFYIQPFYKLRSIGDSVVIGDKVVLNPVNAGQPLHASSHQLVDNPGCNEVNSVNCNTSWKIVLFMKWSDNKDDILKGGDVVRLFHAEQEKFLTCDEHRKKQHVFLRTTGRQSATSATSSKALWEVEVVQHDPCRGGAGYWNSLFRFKHLATGHYLAAEVNPDYEEDDLECQSSLDPEQEARRGRGSQEKMAYSLVSVPEGNDISSIFELDPTTLRGGDSLVPRNSYVRLRHLCTNTWVHSTNIPIDKEEEKPVMLKIGTSPVKEDKEAFAIVPVSPAEVRDLDFANDASKVLGSIAGKLEKGTITQNERRSVTKLLEDLVYFVTGGTNSGQDVLEVVFSKPNRERQKLMREQNILKQIFKLLQAPFTDSGDGPMLRLEELGDQRHAPFRHICRLCYRVLRHSQQDYRKNQEYIAKQFGFMQKQIGYDVLAEDTITALLHNNRKLLEKHITAAEIDTFVSLVRKNREPRFLDYLSDLCVSMNKSIPVTQELICKAVLNPANADILIETKLVLSRFEFEEVSSGDNALEVGEDEEEVWLFWRDSSKEIRSKSIRELAQDAKEGQKEDRDVLSYYRYQLNLFARMCLDRQYLAINEISGQLDVDLILRCMADENLPYELRASFCRLMLHMHVDRDPQEQVTPVKYARLWSEIPSEIAIDDYDSSGTSKDEIKERFAQTMEFVEEYLRDVVCQRFPFSDKEKNKLTFEVVNLARNLIYFGFYNFCDLLRLTKILLAILDCVHITTIFPITKMAKGEESKGSNVMRSIHGVGELMTQVVLRGGGFLPMTPLAAAPEGNVKQSEPEKEDILVMDTKLKIIEILQFILNVRLDYRISCLLCIFKHEFDESNAQMSESPTGSSSQEMPANVPGALDFEHIEEQAEGIFGGRKENTPLDLDDHGGRTFLRVLLHLTMHDYPPLVSGALQLLFRHFSQRQEVLQAFKQVQLLVTSQDVDNYKQIKQDLDQLRSIVEKSELWVYKGQGPDEAMDSVPGENEHKKKEEGHSKSQKPESTSSYNYRVVKEILLRLSKLCVQEGASVRKSRKQQQRLLRNMGAHAVVLELLQIPYEKAEDTRMQEIMKLAHEFLQNFCAGNQQNQALLHKHINLFLNPGILEAVTMQHIFMNNFQLCSEINERVVQHFVHCIETHGRNVQYIKFLQTIVKAEGKFIKKCQDMVMAELVNAGEDVLVFYNDRASFQTLVQMMRSERDRMDENSPLMYHIHLVELLAVCTEGKNVYTEIKCNSLLPLDDIVRVVTHEDCIPEVKIAYINFLNHCYVDTEVEMKEIYTSNHMWKLFENFLVDICRACNNTSDRKHADSILEKYVTEIVMSIVTTFFSSPFSDQSTTLQTRQPVFVQLLQGVFRVYHCTWLMPSQKASVESCIRVLSDVAKSRAIAIPVDLDSQVNNLFLKSHNLVQKTAMNWRLSARNAARRDSVLAASRDYRNIIERLQDIVSALEDRLRPLVQAELSVLVDVLHRPELLFPENTDARRKCESGGFICKLIKHTKQLLEENEEKLCIKVLQTLREMMTKDRGYGEKGEALRQVLVSRYYGTARAAGRRESLTAFNGPLASGSSSKAGPAGGSSGSSSMSRGEMSLADVQCHLDKEGASNLVIDLIMNATSDRVFHESILLAIALLEGGNTTIQHSFFCRLTEDKKSEKFFKVFYDRMKVAQQEIKATVTVNTSDLGNKKKDEDSDRDVPNRKRVREPMTQITEEVRDQLLEASAATRKAYSAYRREADPEEHFSAGEGAQAAADKSKDELEMSAVISIMQPILRFLQLLCENHNRDLQNFLRCQNNKTNYNLVCETLQFLDCICGSTTGGLGLLGLYINEKNVALINQTLESLTEYCQGPCHENQNCIATHESNGIDIITALILNDINPLGKKRMDLVLELKNNASKLLLAIMESRHDSENAERILYNMRPKELVEVIKKAYLQGEVEFEDGENGEDVAASPRNVGHNIYILAHQLARHNKELQNMLKPGGQIEGDEALEFYA…
SIO_010081: ITPR1
subclass of: SO_0000673
so part of: ITPR1
location: complement(join(1135151..1135240,1139393..1139554,1151163..1151323,1152378..1152543,1154716..1154855,1156721..1156822,1157317..1157512,1158643..1158807,1159425..1159600,1162412..1162534,1165153..1165345,1166201..1166305,1167275..1167397,1167761..1167856,1169117..1169227,1170347..1170547,1174031..1174284,1175342..1175522,1189277..1189467,1189977..1190106,1209637..1209748,1210616..1210764,1211797..1211981,1213041..1213161,1216013..1216141,1216832..1216957,1217467..1217718,1219595..1219795,1220151..1220276,1221715..1221852,1222558..1222623,1223541..1223711,1223811..1223972,1224328..1224386,1224558..1224696,1226143..1226330,1227106..1227259,1228176..1228317,1232016..1232267,1234054..1234248,1235300..1235419,1235668..1235840,1236420..1236578,1237041..1237182,1237943..1238103,1238525..1238624,1239455..1239603,1243344..1243388,1244404..1244499,1245642..1245788,1245879..1245962,1246421..1246519,1249312..1249398))
location: region:1135151-1249398:-1
so has part: feature:1249312-1249398:-1:exon
so has part: feature:1246421-1246519:-1:exon
so has part: feature:1245879-1245962:-1:exon
so has part: feature:1245642-1245788:-1:exon
so has part: feature:1244404-1244499:-1:exon
so has part: feature:1243344-1243388:-1:exon
so has part: feature:1239455-1239603:-1:exon
so has part: feature:1238525-1238624:-1:exon
so has part: feature:1237943-1238103:-1:exon
so has part: feature:1237041-1237182:-1:exon
so has part: feature:1236420-1236578:-1:exon
so has part: feature:1235668-1235840:-1:exon
so has part: feature:1235300-1235419:-1:exon
so has part: feature:1234054-1234248:-1:exon
so has part: feature:1232016-1232267:-1:exon
so has part: feature:1228176-1228317:-1:exon
so has part: feature:1227106-1227259:-1:exon
so has part: feature:1226143-1226330:-1:exon
so has part: feature:1224558-1224696:-1:exon
so has part: feature:1224328-1224386:-1:exon
so has part: feature:1223811-1223972:-1:exon
so has part: feature:1223541-1223711:-1:exon
so has part: feature:1222558-1222623:-1:exon
so has part: feature:1221715-1221852:-1:exon
so has part: feature:1220151-1220276:-1:exon
so has part: feature:1219595-1219795:-1:exon
so has part: feature:1217467-1217718:-1:exon
so has part: feature:1216832-1216957:-1:exon
so has part: feature:1216013-1216141:-1:exon
so has part: feature:1213041-1213161:-1:exon
so has part: feature:1211797-1211981:-1:exon
so has part: feature:1210616-1210764:-1:exon
so has part: feature:1209637-1209748:-1:exon
so has part: feature:1189977-1190106:-1:exon
so has part: feature:1189277-1189467:-1:exon
so has part: feature:1175342-1175522:-1:exon
so has part: feature:1174031-1174284:-1:exon
so has part: feature:1170347-1170547:-1:exon
so has part: feature:1169117-1169227:-1:exon
so has part: feature:1167761-1167856:-1:exon
so has part: feature:1167275-1167397:-1:exon
so has part: feature:1166201-1166305:-1:exon
so has part: feature:1165153-1165345:-1:exon
so has part: feature:1162412-1162534:-1:exon
so has part: feature:1159425-1159600:-1:exon
so has part: feature:1158643-1158807:-1:exon
so has part: feature:1157317-1157512:-1:exon
so has part: feature:1156721-1156822:-1:exon
so has part: feature:1154716-1154855:-1:exon
so has part: feature:1152378-1152543:-1:exon
so has part: feature:1151163-1151323:-1:exon
so has part: feature:1139393-1139554:-1:exon
so has part: feature:1135151-1135240:-1:exon

XP_056357237.1
type: Protein
SIO_000068: ncbiprotein

position:1249398:-1
position: 1249398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1249312-1249398:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1246421-1246519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1245879-1245962:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1245642-1245788:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1244404-1244499:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1243344-1243388:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1239455-1239603:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1238525-1238624:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1237943-1238103:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1237041-1237182:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1236420-1236578:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1235668-1235840:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1235300-1235419:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1234054-1234248:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1232016-1232267:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1228176-1228317:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1227106-1227259:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1226143-1226330:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1224558-1224696:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1224328-1224386:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1223811-1223972:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1223541-1223711:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1222558-1222623:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1221715-1221852:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1220151-1220276:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1219595-1219795:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1217467-1217718:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1216832-1216957:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1216013-1216141:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1213041-1213161:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1211797-1211981:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1210616-1210764:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1209637-1209748:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1189977-1190106:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1189277-1189467:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1175342-1175522:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1174031-1174284:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1170347-1170547:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1169117-1169227:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1167761-1167856:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1167275-1167397:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1166201-1166305:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1165153-1165345:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1162412-1162534:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1159425-1159600:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1158643-1158807:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1157317-1157512:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1156721-1156822:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1154716-1154855:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1152378-1152543:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1151163-1151323:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1139393-1139554:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1135151-1135240:-1:exon

SUMF1
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: SUMF1
note: sulfatase modifying factor 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1302711..1324006
location: region:1302711-1324006:1
so has part: feature:1302711-1324006:1:exon
subclass of: SO_0000010

130258344
type: Gene
SIO_000068: ncbigene

position:1302711:1
position: 1302711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1324006:1
position: 1324006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1302711-1324006:1:exon

SUMF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: SUMF1
product: sulfatase modifying factor 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501622.1
SIO_010081: SUMF1
subclass of: SO_0000673
so part of: SUMF1
location: join(1302711..1302948,1304347..1304520,1306172..1306246,1314627..1314709,1316617..1316739,1317286..1317400,1318196..1318309,1321740..1321799,1323201..1324006)
location: region:1302711-1324006:1
so has part: feature:1302711-1302948:1:exon
so has part: feature:1304347-1304520:1:exon
so has part: feature:1306172-1306246:1:exon
so has part: feature:1314627-1314709:1:exon
so has part: feature:1316617-1316739:1:exon
so has part: feature:1317286-1317400:1:exon
so has part: feature:1318196-1318309:1:exon
so has part: feature:1321740-1321799:1:exon
so has part: feature:1323201-1324006:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1302711-1302948:1:exon

position:1302948:1
position: 1302948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1304347-1304520:1:exon

position:1304347:1
position: 1304347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1304520:1
position: 1304520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1306172-1306246:1:exon

position:1306172:1
position: 1306172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1306246:1
position: 1306246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1314627-1314709:1:exon

position:1314627:1
position: 1314627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1314709:1
position: 1314709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1316617-1316739:1:exon

position:1316617:1
position: 1316617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1316739:1
position: 1316739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1317286-1317400:1:exon

position:1317286:1
position: 1317286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1317400:1
position: 1317400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1318196-1318309:1:exon

position:1318196:1
position: 1318196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1318309:1
position: 1318309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1321740-1321799:1:exon

position:1321740:1
position: 1321740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1321799:1
position: 1321799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1323201-1324006:1:exon

position:1323201:1
position: 1323201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SUMF1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 2939378
gene: SUMF1
product: sulfatase modifying factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 1 Protein
transcript id: XR_008841485.1
SIO_010081: SUMF1
so part of: SUMF1
location: join(1302711..1302948,1304347..1304520,1306172..1306246,1314627..1314709,1316617..1316739,1317286..1317400,1318196..1318309,1318723..1318849,1321740..1321799,1323201..1323229)
location: region:1302711-1323229:1
so has part: feature:1302711-1302948:1:exon
so has part: feature:1304347-1304520:1:exon
so has part: feature:1306172-1306246:1:exon
so has part: feature:1314627-1314709:1:exon
so has part: feature:1316617-1316739:1:exon
so has part: feature:1317286-1317400:1:exon
so has part: feature:1318196-1318309:1:exon
so has part: feature:1318723-1318849:1:exon
so has part: feature:1321740-1321799:1:exon
so has part: feature:1323201-1323229:1:exon

position:1323229:1
position: 1323229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1302711-1302948:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1304347-1304520:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1306172-1306246:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1314627-1314709:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1316617-1316739:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1317286-1317400:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1318196-1318309:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1318723-1318849:1:exon

position:1318723:1
position: 1318723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1318849:1
position: 1318849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1321740-1321799:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1323201-1323229:1:exon

SUMF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: SUMF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: formylglycine-generating enzyme
translation: MAAPTRLCRCLFPLLLAMGTGMGMAAAAGTPGSGNCGCSAGRAAGDGREAAARRYSAAAAGSGRSGGRGPMVEIPGGVFTMGTQEPKIQQDGEGPARRVHIDTFYMDQYEVSNQDFERFVNSTGYITEAEKFGDSFVFEGMLSEAVKADIHQAVAAAPWWLPVKGASWRHPEGPDSSISSRMDHPVLHVSWNDALAFCRWAGKRLPTEAEWEYSCRGGLENRLFPWGNKLQPKGQHYANIWQGEFPTNNTAEDGYKGTAPVSAFPPNGFGLYNMVGNAWEWTSDWWAVHHSPQDLHNPTGPASGTDRVKKGGSYMCHKSYCYRYRCAARSQNTPDSSASNLGFRCAAAAPGPR
SIO_010081: SUMF1
subclass of: SO_0000673
so part of: SUMF1
location: join(1302739..1302948,1304347..1304520,1306172..1306246,1314627..1314709,1316617..1316739,1317286..1317400,1318196..1318309,1321740..1321799,1323201..1323308)
location: region:1302739-1323308:1
so has part: feature:1302739-1302948:1:exon
so has part: feature:1304347-1304520:1:exon
so has part: feature:1306172-1306246:1:exon
so has part: feature:1314627-1314709:1:exon
so has part: feature:1316617-1316739:1:exon
so has part: feature:1317286-1317400:1:exon
so has part: feature:1318196-1318309:1:exon
so has part: feature:1321740-1321799:1:exon
so has part: feature:1323201-1323308:1:exon

XP_056357597.1
type: Protein
SIO_000068: ncbiprotein

position:1302739:1
position: 1302739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1323308:1
position: 1323308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1302739-1302948:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1304347-1304520:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1306172-1306246:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1314627-1314709:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1316617-1316739:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1317286-1317400:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1318196-1318309:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1321740-1321799:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1323201-1323308:1:exon

LOC130258345
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: LOC130258345
note: histone-lysine N-methyltransferase SETMAR; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1326941..1329445)
location: region:1326941-1329445:-1
so has part: feature:1326941-1329445:-1:exon
subclass of: SO_0000010

130258345
type: Gene
SIO_000068: ncbigene

position:1326941:-1
position: 1326941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1329445:-1
position: 1329445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1326941-1329445:-1:exon

LOC130258345
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: LOC130258345
product: histone-lysine N-methyltransferase SETMAR
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501623.1
SIO_010081: LOC130258345
subclass of: SO_0000673
so part of: LOC130258345
location: complement(join(1326941..1328127,1329343..1329445))
location: region:1326941-1329445:-1
so has part: feature:1329343-1329445:-1:exon
so has part: feature:1326941-1328127:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1329343-1329445:-1:exon

position:1329343:-1
position: 1329343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1326941-1328127:-1:exon

position:1328127:-1
position: 1328127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC130258345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: LOC130258345
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase SETMAR
translation: MAELSGGTEPVPVALWPPGEAPPVFQYSPESVAGADGELEPNAVTFPGCSCLSRGHSYSGRCLRLPEQQEQPFSSPVFECNSLCCCGERCQNRLVQRGLQLRLQVFRTRRKGWGVRALEPIPRGSFVCEYAGEVLGFAEAQRRIQAQAPQEPNYIIAVREHLHDGRVMETFVDPTRIGNVGRFLNHSCEPNLFMVPVRVDSMVPKLALFAATDISAGEELSYDYSGRSHNVPAAGREHKAVEEENSLRKPCYCGSRTCAAFLPWDSSLFSTPATSP
SIO_010081: LOC130258345
subclass of: SO_0000673
so part of: LOC130258345
location: complement(join(1327375..1328127,1329343..1329420))
location: region:1327375-1329420:-1
so has part: feature:1329343-1329420:-1:exon
so has part: feature:1327375-1328127:-1:exon

XP_056357598.1
type: Protein
SIO_000068: ncbiprotein

position:1327375:-1
position: 1327375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1329420:-1
position: 1329420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1329343-1329420:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1327375-1328127:-1:exon

LRRN1
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: LRRN1
note: leucine rich repeat neuronal 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1408044..1425868)
location: region:1408044-1425868:-1
so has part: feature:1408044-1425868:-1:exon
subclass of: SO_0000010

130258210
type: Gene
SIO_000068: ncbigene

position:1408044:-1
position: 1408044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1425868:-1
position: 1425868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1408044-1425868:-1:exon

LRRN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: LRRN1
product: leucine rich repeat neuronal 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 long SRA reads, 19 Proteins
transcript id: XM_056501379.1
SIO_010081: LRRN1
subclass of: SO_0000673
so part of: LRRN1
location: complement(join(1408044..1411868,1425641..1425868))
location: region:1408044-1425868:-1
so has part: feature:1425641-1425868:-1:exon
so has part: feature:1408044-1411868:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1425641-1425868:-1:exon

position:1425641:-1
position: 1425641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1408044-1411868:-1:exon

position:1411868:-1
position: 1411868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRRN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: LRRN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat neuronal protein 1
translation: MAKVRVVLTVCQLVLELLMNSLTESSIQSNECPQLCVCEIRPWFTPQSTYREATTVDCNDLRLTKIPSNLSSDTQVLLLQSNNIAKTTDELQQLFNLTELDFSQNNFTSIRDVGLSNLTQLTTLHLEENQITEMTDYCLQDLCNLQELYINHNQISSISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIGILDMNFKPLSNLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDNKLIKVPQLALEKVPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRYALDNLPELTKLEATNNPKLSYIHRLAFRNVPALESLMLNNNALNAVYQKTVESLPNLREISIHSNPLRCDCVIHWVNSNKTNIRFMEPLSMFCAMPPEHRGQQVKEVLTQDSNEQCLPMISHETFPNHLNLDIGMTVFLDCRAMAEPEPEIYWVTPLGNKVTVESLSDKYKLSSEGTLEISNIQVEDSGRYTCVAQNIEGADTRVATIRVNGTLLDGTQVLKIYVKQAESHSILVSWKVNSNVMTSNLKWSSATMKIDNPHITYTARVPVDVHEYNLTHLQPSTDYEVCLTVSNIHQQTQRSCVNVTTKTAAFALDISDQETSTALAAVMGSMFAVISLASVSVYIAKRFKRKNYHHSLKKYMQKTSSIPLNELYPPLINLWEGDSDKDKDGSAETKPTQVDTSRSYYMW
SIO_010081: LRRN1
subclass of: SO_0000673
so part of: LRRN1
location: complement(1409486..1411636)
location: region:1409486-1411636:-1
so has part: feature:1409486-1411636:-1:exon

XP_056357354.1
type: Protein
SIO_000068: ncbiprotein

position:1409486:-1
position: 1409486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1411636:-1
position: 1411636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1409486-1411636:-1:exon

LOC130258333
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: LOC130258333
note: uncharacterized LOC130258333; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1506530..1548365
location: region:1506530-1548365:1
so has part: feature:1506530-1548365:1:exon
subclass of: SO_0000011

130258333
type: Gene
SIO_000068: ncbigene

position:1506530:1
position: 1506530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1548365:1
position: 1548365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1506530-1548365:1:exon

LOC130258333
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2939378
nc RNA class: lncRNA
gene: LOC130258333
product: uncharacterized LOC130258333, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008841483.1
SIO_010081: LOC130258333
subclass of: SO_0000673
so part of: LOC130258333
location: join(1506530..1506612,1532081..1532267,1548306..1548365)
location: region:1506530-1548365:1
so has part: feature:1506530-1506612:1:exon
so has part: feature:1532081-1532267:1:exon
so has part: feature:1548306-1548365:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1506530-1506612:1:exon

position:1506612:1
position: 1506612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1532081-1532267:1:exon

position:1532081:1
position: 1532081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1532267:1
position: 1532267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1548306-1548365:1:exon

position:1548306:1
position: 1548306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC130258333
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2939378
nc RNA class: lncRNA
gene: LOC130258333
product: uncharacterized LOC130258333, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008841484.1
SIO_010081: LOC130258333
subclass of: SO_0000673
so part of: LOC130258333
location: join(1531910..1531980,1532081..1532267,1548306..1548365)
location: region:1531910-1548365:1
so has part: feature:1531910-1531980:1:exon
so has part: feature:1532081-1532267:1:exon
so has part: feature:1548306-1548365:1:exon

position:1531910:1
position: 1531910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1531910-1531980:1:exon

position:1531980:1
position: 1531980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1532081-1532267:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1548306-1548365:1:exon

LOC130258332
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: LOC130258332
note: uncharacterized LOC130258332; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1551925..1565909
location: region:1551925-1565909:1
so has part: feature:1551925-1565909:1:exon
subclass of: SO_0000011

130258332
type: Gene
SIO_000068: ncbigene

position:1551925:1
position: 1551925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1565909:1
position: 1565909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1551925-1565909:1:exon

LOC130258332
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 2939378
nc RNA class: lncRNA
gene: LOC130258332
product: uncharacterized LOC130258332
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008841482.1
SIO_010081: LOC130258332
subclass of: SO_0000673
so part of: LOC130258332
location: join(1551925..1552070,1553807..1553922,1565490..1565909)
location: region:1551925-1565909:1
so has part: feature:1551925-1552070:1:exon
so has part: feature:1553807-1553922:1:exon
so has part: feature:1565490-1565909:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1551925-1552070:1:exon

position:1552070:1
position: 1552070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1553807-1553922:1:exon

position:1553807:1
position: 1553807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1553922:1
position: 1553922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1565490-1565909:1:exon

position:1565490:1
position: 1565490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CRBN
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: CRBN
note: cereblon; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1572702..1590752
location: region:1572702-1590752:1
so has part: feature:1572702-1590752:1:exon
subclass of: SO_0000010

130258230
type: Gene
SIO_000068: ncbigene

position:1572702:1
position: 1572702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1590752:1
position: 1590752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1572702-1590752:1:exon

CRBN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: CRBN
product: cereblon, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501412.1
SIO_010081: CRBN
subclass of: SO_0000673
so part of: CRBN
location: join(1572702..1572889,1576010..1576122,1577052..1577254,1578051..1578200,1579507..1579666,1580967..1581029,1581442..1581526,1581670..1581785,1584151..1584215,1585385..1585516,1587106..1590752)
location: region:1572702-1590752:1
so has part: feature:1572702-1572889:1:exon
so has part: feature:1576010-1576122:1:exon
so has part: feature:1577052-1577254:1:exon
so has part: feature:1578051-1578200:1:exon
so has part: feature:1579507-1579666:1:exon
so has part: feature:1580967-1581029:1:exon
so has part: feature:1581442-1581526:1:exon
so has part: feature:1581670-1581785:1:exon
so has part: feature:1584151-1584215:1:exon
so has part: feature:1585385-1585516:1:exon
so has part: feature:1587106-1590752:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1572702-1572889:1:exon

position:1572889:1
position: 1572889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1576010-1576122:1:exon

position:1576010:1
position: 1576010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1576122:1
position: 1576122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1577052-1577254:1:exon

position:1577052:1
position: 1577052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1577254:1
position: 1577254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1578051-1578200:1:exon

position:1578051:1
position: 1578051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1578200:1
position: 1578200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1579507-1579666:1:exon

position:1579507:1
position: 1579507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1579666:1
position: 1579666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1580967-1581029:1:exon

position:1580967:1
position: 1580967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1581029:1
position: 1581029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1581442-1581526:1:exon

position:1581442:1
position: 1581442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1581526:1
position: 1581526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1581670-1581785:1:exon

position:1581670:1
position: 1581670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1581785:1
position: 1581785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1584151-1584215:1:exon

position:1584151:1
position: 1584151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1584215:1
position: 1584215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1585385-1585516:1:exon

position:1585385:1
position: 1585385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1585516:1
position: 1585516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1587106-1590752:1:exon

position:1587106:1
position: 1587106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CRBN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: CRBN
product: cereblon, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501413.1
SIO_010081: CRBN
subclass of: SO_0000673
so part of: CRBN
location: join(1572789..1572889,1576013..1576122,1577052..1577254,1578051..1578200,1579507..1579666,1580967..1581029,1581442..1581526,1581670..1581785,1584151..1584215,1585385..1585516,1587106..1590752)
location: region:1572789-1590752:1
so has part: feature:1572789-1572889:1:exon
so has part: feature:1576013-1576122:1:exon
so has part: feature:1577052-1577254:1:exon
so has part: feature:1578051-1578200:1:exon
so has part: feature:1579507-1579666:1:exon
so has part: feature:1580967-1581029:1:exon
so has part: feature:1581442-1581526:1:exon
so has part: feature:1581670-1581785:1:exon
so has part: feature:1584151-1584215:1:exon
so has part: feature:1585385-1585516:1:exon
so has part: feature:1587106-1590752:1:exon

position:1572789:1
position: 1572789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1572789-1572889:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1576013-1576122:1:exon

position:1576013:1
position: 1576013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1577052-1577254:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1578051-1578200:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1579507-1579666:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1580967-1581029:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1581442-1581526:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1581670-1581785:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1584151-1584215:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1585385-1585516:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1587106-1590752:1:exon

CRBN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: CRBN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein cereblon isoform X1
translation: MAAEERGGEPRDNMGNHLQLVPVESEEEDDNEMEVEDQDGKEAEKPNIINFDTSLPTSHMYLGSDMEEFHGRTLHDDDSCQLIPVLPRLMVMLIPGQTLPLQLFRPQEVSMVRNLIQRDRTFAVLAYSNAHEREAHFGTTAEIYAYREEQEYGVETVKVKAIGRQRFKVLEIRTQSDGIQQAKVQILPERVLPPTMAAVQLQSLSRCHVVPSSKPSWQDRALRQWWQKYQKRKFHCASLTSWPPWLYSLYDAETLMERVKRQLHEWDENLKDESLPSNPVDFSYRVAACLPIDDALRIQLLKIGSAVQRLRCELDIMNKCTSLCCKQCQDTEITTKNEIFSLSLCGPMAAYVNPHGYIHETLTVYKASNLSLSGRPSTEHSWFPGYAWTIAQCRVCGSHMGWKFTATRRELAPPRFWGLTRSALLPRIPGGEPEDSERGRSPLLCL
SIO_010081: CRBN
subclass of: SO_0000673
so part of: CRBN
location: join(1572823..1572889,1576010..1576122,1577052..1577254,1578051..1578200,1579507..1579666,1580967..1581029,1581442..1581526,1581670..1581785,1584151..1584215,1585385..1585516,1587106..1587292)
location: region:1572823-1587292:1
so has part: feature:1572823-1572889:1:exon
so has part: feature:1576010-1576122:1:exon
so has part: feature:1577052-1577254:1:exon
so has part: feature:1578051-1578200:1:exon
so has part: feature:1579507-1579666:1:exon
so has part: feature:1580967-1581029:1:exon
so has part: feature:1581442-1581526:1:exon
so has part: feature:1581670-1581785:1:exon
so has part: feature:1584151-1584215:1:exon
so has part: feature:1585385-1585516:1:exon
so has part: feature:1587106-1587292:1:exon

XP_056357387.1
type: Protein
SIO_000068: ncbiprotein

position:1572823:1
position: 1572823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1587292:1
position: 1587292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1572823-1572889:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1576010-1576122:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1577052-1577254:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1578051-1578200:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1579507-1579666:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1580967-1581029:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1581442-1581526:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1581670-1581785:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1584151-1584215:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1585385-1585516:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1587106-1587292:1:exon

CRBN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: CRBN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein cereblon isoform X2
translation: MAAEERGGEPRDNMGNHLQLVPESEEEDDNEMEVEDQDGKEAEKPNIINFDTSLPTSHMYLGSDMEEFHGRTLHDDDSCQLIPVLPRLMVMLIPGQTLPLQLFRPQEVSMVRNLIQRDRTFAVLAYSNAHEREAHFGTTAEIYAYREEQEYGVETVKVKAIGRQRFKVLEIRTQSDGIQQAKVQILPERVLPPTMAAVQLQSLSRCHVVPSSKPSWQDRALRQWWQKYQKRKFHCASLTSWPPWLYSLYDAETLMERVKRQLHEWDENLKDESLPSNPVDFSYRVAACLPIDDALRIQLLKIGSAVQRLRCELDIMNKCTSLCCKQCQDTEITTKNEIFSLSLCGPMAAYVNPHGYIHETLTVYKASNLSLSGRPSTEHSWFPGYAWTIAQCRVCGSHMGWKFTATRRELAPPRFWGLTRSALLPRIPGGEPEDSERGRSPLLCL
SIO_010081: CRBN
subclass of: SO_0000673
so part of: CRBN
location: join(1572823..1572889,1576013..1576122,1577052..1577254,1578051..1578200,1579507..1579666,1580967..1581029,1581442..1581526,1581670..1581785,1584151..1584215,1585385..1585516,1587106..1587292)
location: region:1572823-1587292:1
so has part: feature:1572823-1572889:1:exon
so has part: feature:1576013-1576122:1:exon
so has part: feature:1577052-1577254:1:exon
so has part: feature:1578051-1578200:1:exon
so has part: feature:1579507-1579666:1:exon
so has part: feature:1580967-1581029:1:exon
so has part: feature:1581442-1581526:1:exon
so has part: feature:1581670-1581785:1:exon
so has part: feature:1584151-1584215:1:exon
so has part: feature:1585385-1585516:1:exon
so has part: feature:1587106-1587292:1:exon

XP_056357388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1572823-1572889:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1576013-1576122:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1577052-1577254:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1578051-1578200:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1579507-1579666:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1580967-1581029:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1581442-1581526:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1581670-1581785:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1584151-1584215:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1585385-1585516:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1587106-1587292:1:exon

TRNT1
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: TRNT1
note: tRNA nucleotidyl transferase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1591460..1596401)
location: region:1591460-1596401:-1
so has part: feature:1591460-1596401:-1:exon
subclass of: SO_0000010

130258231
type: Gene
SIO_000068: ncbigene

position:1591460:-1
position: 1591460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1596401:-1
position: 1596401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1591460-1596401:-1:exon

TRNT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: TRNT1
product: tRNA nucleotidyl transferase 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501414.1
SIO_010081: TRNT1
subclass of: SO_0000673
so part of: TRNT1
location: complement(join(1591460..1592563,1593227..1593477,1593646..1593839,1594017..1594143,1594339..1594477,1594992..1595185,1596076..1596401))
location: region:1591460-1596401:-1
so has part: feature:1596076-1596401:-1:exon
so has part: feature:1594992-1595185:-1:exon
so has part: feature:1594339-1594477:-1:exon
so has part: feature:1594017-1594143:-1:exon
so has part: feature:1593646-1593839:-1:exon
so has part: feature:1593227-1593477:-1:exon
so has part: feature:1591460-1592563:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1596076-1596401:-1:exon

position:1596076:-1
position: 1596076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1594992-1595185:-1:exon

position:1594992:-1
position: 1594992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1595185:-1
position: 1595185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1594339-1594477:-1:exon

position:1594339:-1
position: 1594339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1594477:-1
position: 1594477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1594017-1594143:-1:exon

position:1594017:-1
position: 1594017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1594143:-1
position: 1594143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1593646-1593839:-1:exon

position:1593646:-1
position: 1593646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1593839:-1
position: 1593839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1593227-1593477:-1:exon

position:1593227:-1
position: 1593227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1593477:-1
position: 1593477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1591460-1592563:-1:exon

position:1592563:-1
position: 1592563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRNT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: TRNT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CCA tRNA nucleotidyltransferase 1, mitochondrial
translation: MWAELLVVPRRAGLRLLRRRHGGSGSAMRLQAPQFQALFTPGLRSVAELFEKKSYELRIAGGAVRDLLSGVTPQDIDFATTATPAEMKEMFTAAGVRLINNKGEKHGTITARLHEQNFEITTLRIDVVTDGRHAEVEFTTDWHKDAERRDLTVNSMFLGLDGTLYDFFNGYEDLKNKKIRFVGKAAERIQEDYLRILRYFRFYGRIAETPGDHEPITLQAIKENAKGLAGISGERIWVELKKILTGNHVNHLVQLMYELDIAQYIGLPLDGNLEEFARVTKNIQNLSPKPMTVLTSLFKGKDDVTNLDLRLKISKEEKNLGLFLVKHRQELTKASGPEPLRPYQDFLMDSREANTNSKIFELLKYQGEEQLLREMQAWTVPSFPVSGHDLRKMGVSSGKEIGTALQQLRDEWKKSGYHMDKEELLSCLKKV
SIO_010081: TRNT1
subclass of: SO_0000673
so part of: TRNT1
location: complement(join(1592315..1592563,1593227..1593477,1593646..1593839,1594017..1594143,1594339..1594477,1594992..1595185,1596076..1596217))
location: region:1592315-1596217:-1
so has part: feature:1596076-1596217:-1:exon
so has part: feature:1594992-1595185:-1:exon
so has part: feature:1594339-1594477:-1:exon
so has part: feature:1594017-1594143:-1:exon
so has part: feature:1593646-1593839:-1:exon
so has part: feature:1593227-1593477:-1:exon
so has part: feature:1592315-1592563:-1:exon

XP_056357389.1
type: Protein
SIO_000068: ncbiprotein

position:1592315:-1
position: 1592315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1596217:-1
position: 1596217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1596076-1596217:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1594992-1595185:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1594339-1594477:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1594017-1594143:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1593646-1593839:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1593227-1593477:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1592315-1592563:-1:exon

IL5RA
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: IL5RA
note: interleukin 5 receptor subunit alpha; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1598955..1609809
location: region:1598955-1609809:1
so has part: feature:1598955-1609809:1:exon
subclass of: SO_0000010

130258343
type: Gene
SIO_000068: ncbigene

position:1598955:1
position: 1598955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1609809:1
position: 1609809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1598955-1609809:1:exon

IL5RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: IL5RA
product: interleukin 5 receptor subunit alpha, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 4 Proteins
transcript id: XM_056501621.1
SIO_010081: IL5RA
subclass of: SO_0000673
so part of: IL5RA
location: join(1598955..1599001,1601260..1601393,1602512..1602657,1602937..1603075,1603699..1603831,1603903..1604093,1605052..1605197,1605625..1605763,1606968..1607064,1609621..1609809)
location: region:1598955-1609809:1
so has part: feature:1598955-1599001:1:exon
so has part: feature:1601260-1601393:1:exon
so has part: feature:1602512-1602657:1:exon
so has part: feature:1602937-1603075:1:exon
so has part: feature:1603699-1603831:1:exon
so has part: feature:1603903-1604093:1:exon
so has part: feature:1605052-1605197:1:exon
so has part: feature:1605625-1605763:1:exon
so has part: feature:1606968-1607064:1:exon
so has part: feature:1609621-1609809:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1598955-1599001:1:exon

position:1599001:1
position: 1599001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1601260-1601393:1:exon

position:1601260:1
position: 1601260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1601393:1
position: 1601393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1602512-1602657:1:exon

position:1602512:1
position: 1602512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1602657:1
position: 1602657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1602937-1603075:1:exon

position:1602937:1
position: 1602937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1603075:1
position: 1603075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1603699-1603831:1:exon

position:1603699:1
position: 1603699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1603831:1
position: 1603831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1603903-1604093:1:exon

position:1603903:1
position: 1603903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1604093:1
position: 1604093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1605052-1605197:1:exon

position:1605052:1
position: 1605052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1605197:1
position: 1605197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1605625-1605763:1:exon

position:1605625:1
position: 1605625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1605763:1
position: 1605763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1606968-1607064:1:exon

position:1606968:1
position: 1606968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1607064:1
position: 1607064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1609621-1609809:1:exon

position:1609621:1
position: 1609621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IL5RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: IL5RA
product: interleukin 5 receptor subunit alpha, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 4 Proteins
transcript id: XM_056501619.1
SIO_010081: IL5RA
subclass of: SO_0000673
so part of: IL5RA
location: join(1598955..1599001,1601260..1601393,1602512..1602657,1602937..1603075,1603699..1603831,1603903..1604093,1605052..1605197,1605625..1605763,1606968..1607064,1607499..1607707)
location: region:1598955-1607707:1
so has part: feature:1598955-1599001:1:exon
so has part: feature:1601260-1601393:1:exon
so has part: feature:1602512-1602657:1:exon
so has part: feature:1602937-1603075:1:exon
so has part: feature:1603699-1603831:1:exon
so has part: feature:1603903-1604093:1:exon
so has part: feature:1605052-1605197:1:exon
so has part: feature:1605625-1605763:1:exon
so has part: feature:1606968-1607064:1:exon
so has part: feature:1607499-1607707:1:exon

position:1607707:1
position: 1607707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1598955-1599001:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1601260-1601393:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1602512-1602657:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1602937-1603075:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1603699-1603831:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1603903-1604093:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1605052-1605197:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1605625-1605763:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1606968-1607064:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1607499-1607707:1:exon

position:1607499:1
position: 1607499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IL5RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: IL5RA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-5 receptor subunit alpha isoform X2
translation: MLASRMQVFLLLLWTTTTPQGAGVQVLPPVNFTLTVSALAQVLLHWEPNPAQEQNNSTIRYDVEILSPVQEEYDTKSTRSVRTAALHDGFSARVRTLLLQGHLQMSSDWVEGNLPPLPGAADTSVTNVSCVTHVTTPGNVSLCCTWLPGQGAPEDTKYFLFYRYGAHTEECPTHSKDKRNRNTECRFANTQIKAGGIDNLIVIHINGSSQRAAIKPFQQLFNQNAIEKVNIPRNISISLEQNDLLATWEKPISPFHEECFEYEFYLINLKSGNKQILKISSNSFQLRVDGSSSYSIRVRANHNHICRARGFWSDWSETFHVGQNKLENSIAWILTLLCVSMSCTLLLVAVLCKINLQKRAESF
SIO_010081: IL5RA
subclass of: SO_0000673
so part of: IL5RA
location: join(1601324..1601393,1602512..1602657,1602937..1603075,1603699..1603831,1603903..1604093,1605052..1605197,1605625..1605763,1606968..1607064,1609621..1609651)
location: region:1601324-1609651:1
so has part: feature:1601324-1601393:1:exon
so has part: feature:1602512-1602657:1:exon
so has part: feature:1602937-1603075:1:exon
so has part: feature:1603699-1603831:1:exon
so has part: feature:1603903-1604093:1:exon
so has part: feature:1605052-1605197:1:exon
so has part: feature:1605625-1605763:1:exon
so has part: feature:1606968-1607064:1:exon
so has part: feature:1609621-1609651:1:exon

XP_056357596.1
type: Protein
SIO_000068: ncbiprotein

position:1601324:1
position: 1601324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1609651:1
position: 1609651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1601324-1601393:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1602512-1602657:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1602937-1603075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1603699-1603831:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1603903-1604093:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1605052-1605197:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1605625-1605763:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1606968-1607064:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1609621-1609651:1:exon

IL5RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: IL5RA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-5 receptor subunit alpha isoform X1
translation: MLASRMQVFLLLLWTTTTPQGAGVQVLPPVNFTLTVSALAQVLLHWEPNPAQEQNNSTIRYDVEILSPVQEEYDTKSTRSVRTAALHDGFSARVRTLLLQGHLQMSSDWVEGNLPPLPGAADTSVTNVSCVTHVTTPGNVSLCCTWLPGQGAPEDTKYFLFYRYGAHTEECPTHSKDKRNRNTECRFANTQIKAGGIDNLIVIHINGSSQRAAIKPFQQLFNQNAIEKVNIPRNISISLEQNDLLATWEKPISPFHEECFEYEFYLINLKSGNKQILKISSNSFQLRVDGSSSYSIRVRANHNHICRARGFWSDWSETFHVGQNKLENSIAWILTLLCVSMSCTLLLVAVLCKIGSGCNIVKTKTPQMCSEEAQLHFGFVCDSRSEVMN
SIO_010081: IL5RA
subclass of: SO_0000673
so part of: IL5RA
location: join(1601324..1601393,1602512..1602657,1602937..1603075,1603699..1603831,1603903..1604093,1605052..1605197,1605625..1605763,1606968..1607064,1607499..1607607)
location: region:1601324-1607607:1
so has part: feature:1601324-1601393:1:exon
so has part: feature:1602512-1602657:1:exon
so has part: feature:1602937-1603075:1:exon
so has part: feature:1603699-1603831:1:exon
so has part: feature:1603903-1604093:1:exon
so has part: feature:1605052-1605197:1:exon
so has part: feature:1605625-1605763:1:exon
so has part: feature:1606968-1607064:1:exon
so has part: feature:1607499-1607607:1:exon

XP_056357594.1
type: Protein
SIO_000068: ncbiprotein

position:1607607:1
position: 1607607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1601324-1601393:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1602512-1602657:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1602937-1603075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1603699-1603831:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1603903-1604093:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1605052-1605197:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1605625-1605763:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1606968-1607064:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1607499-1607607:1:exon

LOC130258400
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: LOC130258400
note: contactin-4; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1616762..1875901)
location: region:1616762-1875901:-1
so has part: feature:1616762-1875901:-1:exon
subclass of: SO_0000010

130258400
type: Gene
SIO_000068: ncbigene

position:1616762:-1
position: 1616762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1875901:-1
position: 1875901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1616762-1875901:-1:exon

LOC130258400
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: LOC130258400
product: contactin-4, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501727.1
SIO_010081: LOC130258400
subclass of: SO_0000673
so part of: LOC130258400
location: complement(join(1616762..1618476,1619804..1619972,1621160..1621272,1621762..1621948,1622614..1622729,1623877..1624111,1625506..1625576,1625892..1626041,1628045..1628203,1629237..1629354,1630405..1630580,1648472..1648599,1663765..1663915,1667076..1667205,1669603..1669739,1679177..1679361,1679960..1680062,1684423..1684626,1701886..1701981,1715510..1715685,1716887..1717013,1742355..1742489,1842936..1842980,1875767..1875901))
location: region:1616762-1875901:-1
so has part: feature:1875767-1875901:-1:exon
so has part: feature:1842936-1842980:-1:exon
so has part: feature:1742355-1742489:-1:exon
so has part: feature:1716887-1717013:-1:exon
so has part: feature:1715510-1715685:-1:exon
so has part: feature:1701886-1701981:-1:exon
so has part: feature:1684423-1684626:-1:exon
so has part: feature:1679960-1680062:-1:exon
so has part: feature:1679177-1679361:-1:exon
so has part: feature:1669603-1669739:-1:exon
so has part: feature:1667076-1667205:-1:exon
so has part: feature:1663765-1663915:-1:exon
so has part: feature:1648472-1648599:-1:exon
so has part: feature:1630405-1630580:-1:exon
so has part: feature:1629237-1629354:-1:exon
so has part: feature:1628045-1628203:-1:exon
so has part: feature:1625892-1626041:-1:exon
so has part: feature:1625506-1625576:-1:exon
so has part: feature:1623877-1624111:-1:exon
so has part: feature:1622614-1622729:-1:exon
so has part: feature:1621762-1621948:-1:exon
so has part: feature:1621160-1621272:-1:exon
so has part: feature:1619804-1619972:-1:exon
so has part: feature:1616762-1618476:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1875767-1875901:-1:exon

position:1875767:-1
position: 1875767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1842936-1842980:-1:exon

position:1842936:-1
position: 1842936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1842980:-1
position: 1842980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1742355-1742489:-1:exon

position:1742355:-1
position: 1742355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1742489:-1
position: 1742489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1716887-1717013:-1:exon

position:1716887:-1
position: 1716887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1717013:-1
position: 1717013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1715510-1715685:-1:exon

position:1715510:-1
position: 1715510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1715685:-1
position: 1715685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1701886-1701981:-1:exon

position:1701886:-1
position: 1701886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1701981:-1
position: 1701981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1684423-1684626:-1:exon

position:1684423:-1
position: 1684423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1684626:-1
position: 1684626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1679960-1680062:-1:exon

position:1679960:-1
position: 1679960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1680062:-1
position: 1680062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1679177-1679361:-1:exon

position:1679177:-1
position: 1679177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1679361:-1
position: 1679361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1669603-1669739:-1:exon

position:1669603:-1
position: 1669603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1669739:-1
position: 1669739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1667076-1667205:-1:exon

position:1667076:-1
position: 1667076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1667205:-1
position: 1667205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1663765-1663915:-1:exon

position:1663765:-1
position: 1663765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1663915:-1
position: 1663915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1648472-1648599:-1:exon

position:1648472:-1
position: 1648472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1648599:-1
position: 1648599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1630405-1630580:-1:exon

position:1630405:-1
position: 1630405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1630580:-1
position: 1630580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1629237-1629354:-1:exon

position:1629237:-1
position: 1629237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1629354:-1
position: 1629354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1628045-1628203:-1:exon

position:1628045:-1
position: 1628045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1628203:-1
position: 1628203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1625892-1626041:-1:exon

position:1625892:-1
position: 1625892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1626041:-1
position: 1626041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1625506-1625576:-1:exon

position:1625506:-1
position: 1625506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1625576:-1
position: 1625576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1623877-1624111:-1:exon

position:1623877:-1
position: 1623877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1624111:-1
position: 1624111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1622614-1622729:-1:exon

position:1622614:-1
position: 1622614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1622729:-1
position: 1622729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1621762-1621948:-1:exon

position:1621762:-1
position: 1621762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1621948:-1
position: 1621948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1621160-1621272:-1:exon

position:1621160:-1
position: 1621160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1621272:-1
position: 1621272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1619804-1619972:-1:exon

position:1619804:-1
position: 1619804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1619972:-1
position: 1619972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1616762-1618476:-1:exon

position:1618476:-1
position: 1618476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC130258400
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: LOC130258400
product: contactin-4, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501725.1
SIO_010081: LOC130258400
subclass of: SO_0000673
so part of: LOC130258400
location: complement(join(1616762..1618476,1619804..1619972,1621160..1621272,1621762..1621948,1622614..1622729,1623877..1624111,1625506..1625576,1625892..1626041,1628045..1628203,1629237..1629357,1630405..1630580,1648472..1648599,1663765..1663915,1667076..1667205,1669603..1669739,1679177..1679361,1679960..1680062,1684423..1684626,1701886..1701981,1715510..1715685,1716887..1717013,1742355..1742489,1842936..1842980,1875767..1875901))
location: region:1616762-1875901:-1
so has part: feature:1875767-1875901:-1:exon
so has part: feature:1842936-1842980:-1:exon
so has part: feature:1742355-1742489:-1:exon
so has part: feature:1716887-1717013:-1:exon
so has part: feature:1715510-1715685:-1:exon
so has part: feature:1701886-1701981:-1:exon
so has part: feature:1684423-1684626:-1:exon
so has part: feature:1679960-1680062:-1:exon
so has part: feature:1679177-1679361:-1:exon
so has part: feature:1669603-1669739:-1:exon
so has part: feature:1667076-1667205:-1:exon
so has part: feature:1663765-1663915:-1:exon
so has part: feature:1648472-1648599:-1:exon
so has part: feature:1630405-1630580:-1:exon
so has part: feature:1629237-1629357:-1:exon
so has part: feature:1628045-1628203:-1:exon
so has part: feature:1625892-1626041:-1:exon
so has part: feature:1625506-1625576:-1:exon
so has part: feature:1623877-1624111:-1:exon
so has part: feature:1622614-1622729:-1:exon
so has part: feature:1621762-1621948:-1:exon
so has part: feature:1621160-1621272:-1:exon
so has part: feature:1619804-1619972:-1:exon
so has part: feature:1616762-1618476:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1875767-1875901:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1842936-1842980:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1742355-1742489:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1716887-1717013:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1715510-1715685:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1701886-1701981:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1684423-1684626:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1679960-1680062:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1679177-1679361:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1669603-1669739:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1667076-1667205:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1663765-1663915:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1648472-1648599:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1630405-1630580:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1629237-1629357:-1:exon

position:1629357:-1
position: 1629357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1628045-1628203:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1625892-1626041:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1625506-1625576:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1623877-1624111:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1622614-1622729:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1621762-1621948:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1621160-1621272:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1619804-1619972:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1616762-1618476:-1:exon

LOC130258400
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: LOC130258400
product: contactin-4, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501726.1
SIO_010081: LOC130258400
subclass of: SO_0000673
so part of: LOC130258400
location: complement(join(1616762..1618476,1619804..1619972,1621160..1621272,1621762..1621948,1622614..1622729,1623877..1624111,1625506..1625576,1625892..1626041,1628045..1628203,1629237..1629357,1630405..1630580,1648472..1648599,1663765..1663915,1667076..1667205,1669603..1669739,1679177..1679361,1679960..1680062,1684423..1684626,1701886..1701981,1715510..1715685,1716887..1717013,1742355..1742489,1842936..1842980,1847277..1847403,1875767..1875850))
location: region:1616762-1875850:-1
so has part: feature:1875767-1875850:-1:exon
so has part: feature:1847277-1847403:-1:exon
so has part: feature:1842936-1842980:-1:exon
so has part: feature:1742355-1742489:-1:exon
so has part: feature:1716887-1717013:-1:exon
so has part: feature:1715510-1715685:-1:exon
so has part: feature:1701886-1701981:-1:exon
so has part: feature:1684423-1684626:-1:exon
so has part: feature:1679960-1680062:-1:exon
so has part: feature:1679177-1679361:-1:exon
so has part: feature:1669603-1669739:-1:exon
so has part: feature:1667076-1667205:-1:exon
so has part: feature:1663765-1663915:-1:exon
so has part: feature:1648472-1648599:-1:exon
so has part: feature:1630405-1630580:-1:exon
so has part: feature:1629237-1629357:-1:exon
so has part: feature:1628045-1628203:-1:exon
so has part: feature:1625892-1626041:-1:exon
so has part: feature:1625506-1625576:-1:exon
so has part: feature:1623877-1624111:-1:exon
so has part: feature:1622614-1622729:-1:exon
so has part: feature:1621762-1621948:-1:exon
so has part: feature:1621160-1621272:-1:exon
so has part: feature:1619804-1619972:-1:exon
so has part: feature:1616762-1618476:-1:exon

position:1875850:-1
position: 1875850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1875767-1875850:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1847277-1847403:-1:exon

position:1847277:-1
position: 1847277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1847403:-1
position: 1847403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1842936-1842980:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1742355-1742489:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1716887-1717013:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1715510-1715685:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1701886-1701981:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1684423-1684626:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1679960-1680062:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1679177-1679361:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1669603-1669739:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1667076-1667205:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1663765-1663915:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1648472-1648599:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1630405-1630580:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1629237-1629357:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1628045-1628203:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1625892-1626041:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1625506-1625576:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1623877-1624111:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1622614-1622729:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1621762-1621948:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1621160-1621272:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1619804-1619972:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1616762-1618476:-1:exon

LOC130258400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: LOC130258400
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: contactin-4 isoform X2
translation: MRLLWELLVLHSVLLCLADDNTLHGPVFLQEPNSLIFPLDSEEKKVKLSCEVKGNPRPTIGWRLNGSSIEVGRDYRYSLLEGSLLISSPSKSQDAGTYQCVATNPFGTIVSREAQLQFAYLESFRTRTRSTVSVRQGQGMVLLCGPPPHAGELTYAWIFNEYPSFVQQDSRRFVSQETGNLYIAKVESSDVGNYTCVVTNTVTNSRVLGPPTPLVLRNDGVMGEYEPKIEVQFPETVPSAKGTTVKLECFALGNPVPSISWRRADGQQLPRKARRLRSSGLLEIPNFQQEDAGPYECVAENVRGRNVARGQLTFYAQPSWTQRIGDVRAALEERVAWECRASGRPKPSYRWLKDGEPLLPQGRVQLEQGSLTIANVSLSDAGMYQCVAENRHGAILASAELSVVAIGPDFSKTLLKKLTLVKVGGEVIIECKPKASPRPTYSWKKGKDILRENERITVLDDGSLRIVNVTKSDAGSYTCVATNHFGTASSTGSLLVKDPTRVMVSPFSMDVTVGESIVLPCQVSHDHSLDIVFTWTFNGHLIDFEKDGDHFERVGGDSAGDLMIRSIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPPEAVTIDEVTDTTAQLSWRPGADNHSPITMYVVQARTPFSVGWQAVSTVPEVIDGRTLTATVVGLNPWVEYEFRVVAANLIGIGEPSSASERRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGGGFGYVVAFRPLGTVSWMQTVVASADAARYVFRNESLPPFSPYEVKVGVYNNKGEGSFSPVTVVYSAEEEPTRAPTTVLARSLSASDVEVSWAPPWENQHKGRIQGYEVRCWRHDEKEENARRIRTVGNQTSTRVSNLRGNALYHLAVRAYNTAGTGPSSAAVNVTTKKPPPSQPPGNIVWNSSDSKIILNWDQVKALDNESEVRGYKVLYRWNTQGSTSVIETNKTSVELSLPFEEDYIIEIKPFSDGGDGSSSEQIRIPKISNAYARGSGSSTSSACTLSALSTIMISLTARSSL
SIO_010081: LOC130258400
subclass of: SO_0000673
so part of: LOC130258400
location: complement(join(1618376..1618476,1619804..1619972,1621160..1621272,1621762..1621948,1622614..1622729,1623877..1624111,1625506..1625576,1625892..1626041,1628045..1628203,1629237..1629354,1630405..1630580,1648472..1648599,1663765..1663915,1667076..1667205,1669603..1669739,1679177..1679361,1679960..1680062,1684423..1684626,1701886..1701981,1715510..1715685,1716887..1717013,1742355..1742409))
location: region:1618376-1742409:-1
so has part: feature:1742355-1742409:-1:exon
so has part: feature:1716887-1717013:-1:exon
so has part: feature:1715510-1715685:-1:exon
so has part: feature:1701886-1701981:-1:exon
so has part: feature:1684423-1684626:-1:exon
so has part: feature:1679960-1680062:-1:exon
so has part: feature:1679177-1679361:-1:exon
so has part: feature:1669603-1669739:-1:exon
so has part: feature:1667076-1667205:-1:exon
so has part: feature:1663765-1663915:-1:exon
so has part: feature:1648472-1648599:-1:exon
so has part: feature:1630405-1630580:-1:exon
so has part: feature:1629237-1629354:-1:exon
so has part: feature:1628045-1628203:-1:exon
so has part: feature:1625892-1626041:-1:exon
so has part: feature:1625506-1625576:-1:exon
so has part: feature:1623877-1624111:-1:exon
so has part: feature:1622614-1622729:-1:exon
so has part: feature:1621762-1621948:-1:exon
so has part: feature:1621160-1621272:-1:exon
so has part: feature:1619804-1619972:-1:exon
so has part: feature:1618376-1618476:-1:exon

XP_056357702.1
type: Protein
SIO_000068: ncbiprotein

position:1618376:-1
position: 1618376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1742409:-1
position: 1742409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1742355-1742409:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1716887-1717013:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1715510-1715685:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1701886-1701981:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1684423-1684626:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1679960-1680062:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1679177-1679361:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1669603-1669739:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1667076-1667205:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1663765-1663915:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1648472-1648599:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1630405-1630580:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1629237-1629354:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1628045-1628203:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1625892-1626041:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1625506-1625576:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1623877-1624111:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1622614-1622729:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1621762-1621948:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1621160-1621272:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1619804-1619972:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1618376-1618476:-1:exon

LOC130258400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: LOC130258400
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: contactin-4 isoform X1
translation: MRLLWELLVLHSVLLCLADDNTLHGPVFLQEPNSLIFPLDSEEKKVKLSCEVKGNPRPTIGWRLNGSSIEVGRDYRYSLLEGSLLISSPSKSQDAGTYQCVATNPFGTIVSREAQLQFAYLESFRTRTRSTVSVRQGQGMVLLCGPPPHAGELTYAWIFNEYPSFVQQDSRRFVSQETGNLYIAKVESSDVGNYTCVVTNTVTNSRVLGPPTPLVLRNDGVMGEYEPKIEVQFPETVPSAKGTTVKLECFALGNPVPSISWRRADGQQLPRKARRLRSSGLLEIPNFQQEDAGPYECVAENVRGRNVARGQLTFYAQPSWTQRIGDVRAALEERVAWECRASGRPKPSYRWLKDGEPLLPQGRVQLEQGSLTIANVSLSDAGMYQCVAENRHGAILASAELSVVAIGPDFSKTLLKKLTLVKVGGEVIIECKPKASPRPTYSWKKGKDILRENERITVLDDGSLRIVNVTKSDAGSYTCVATNHFGTASSTGSLLVKDPTRVMVSPFSMDVTVGESIVLPCQVSHDHSLDIVFTWTFNGHLIDFEKDGDHFERVGGQDSAGDLMIRSIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPPEAVTIDEVTDTTAQLSWRPGADNHSPITMYVVQARTPFSVGWQAVSTVPEVIDGRTLTATVVGLNPWVEYEFRVVAANLIGIGEPSSASERRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGGGFGYVVAFRPLGTVSWMQTVVASADAARYVFRNESLPPFSPYEVKVGVYNNKGEGSFSPVTVVYSAEEEPTRAPTTVLARSLSASDVEVSWAPPWENQHKGRIQGYEVRCWRHDEKEENARRIRTVGNQTSTRVSNLRGNALYHLAVRAYNTAGTGPSSAAVNVTTKKPPPSQPPGNIVWNSSDSKIILNWDQVKALDNESEVRGYKVLYRWNTQGSTSVIETNKTSVELSLPFEEDYIIEIKPFSDGGDGSSSEQIRIPKISNAYARGSGSSTSSACTLSALSTIMISLTARSSL
SIO_010081: LOC130258400
subclass of: SO_0000673
so part of: LOC130258400
location: complement(join(1618376..1618476,1619804..1619972,1621160..1621272,1621762..1621948,1622614..1622729,1623877..1624111,1625506..1625576,1625892..1626041,1628045..1628203,1629237..1629357,1630405..1630580,1648472..1648599,1663765..1663915,1667076..1667205,1669603..1669739,1679177..1679361,1679960..1680062,1684423..1684626,1701886..1701981,1715510..1715685,1716887..1717013,1742355..1742409))
location: region:1618376-1742409:-1
so has part: feature:1742355-1742409:-1:exon
so has part: feature:1716887-1717013:-1:exon
so has part: feature:1715510-1715685:-1:exon
so has part: feature:1701886-1701981:-1:exon
so has part: feature:1684423-1684626:-1:exon
so has part: feature:1679960-1680062:-1:exon
so has part: feature:1679177-1679361:-1:exon
so has part: feature:1669603-1669739:-1:exon
so has part: feature:1667076-1667205:-1:exon
so has part: feature:1663765-1663915:-1:exon
so has part: feature:1648472-1648599:-1:exon
so has part: feature:1630405-1630580:-1:exon
so has part: feature:1629237-1629357:-1:exon
so has part: feature:1628045-1628203:-1:exon
so has part: feature:1625892-1626041:-1:exon
so has part: feature:1625506-1625576:-1:exon
so has part: feature:1623877-1624111:-1:exon
so has part: feature:1622614-1622729:-1:exon
so has part: feature:1621762-1621948:-1:exon
so has part: feature:1621160-1621272:-1:exon
so has part: feature:1619804-1619972:-1:exon
so has part: feature:1618376-1618476:-1:exon

XP_056357700.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1742355-1742409:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1716887-1717013:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1715510-1715685:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1701886-1701981:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1684423-1684626:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1679960-1680062:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1679177-1679361:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1669603-1669739:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1667076-1667205:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1663765-1663915:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1648472-1648599:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1630405-1630580:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1629237-1629357:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1628045-1628203:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1625892-1626041:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1625506-1625576:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1623877-1624111:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1622614-1622729:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1621762-1621948:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1621160-1621272:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1619804-1619972:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1618376-1618476:-1:exon

LOC130258400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: LOC130258400
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: contactin-4 isoform X1
translation: MRLLWELLVLHSVLLCLADDNTLHGPVFLQEPNSLIFPLDSEEKKVKLSCEVKGNPRPTIGWRLNGSSIEVGRDYRYSLLEGSLLISSPSKSQDAGTYQCVATNPFGTIVSREAQLQFAYLESFRTRTRSTVSVRQGQGMVLLCGPPPHAGELTYAWIFNEYPSFVQQDSRRFVSQETGNLYIAKVESSDVGNYTCVVTNTVTNSRVLGPPTPLVLRNDGVMGEYEPKIEVQFPETVPSAKGTTVKLECFALGNPVPSISWRRADGQQLPRKARRLRSSGLLEIPNFQQEDAGPYECVAENVRGRNVARGQLTFYAQPSWTQRIGDVRAALEERVAWECRASGRPKPSYRWLKDGEPLLPQGRVQLEQGSLTIANVSLSDAGMYQCVAENRHGAILASAELSVVAIGPDFSKTLLKKLTLVKVGGEVIIECKPKASPRPTYSWKKGKDILRENERITVLDDGSLRIVNVTKSDAGSYTCVATNHFGTASSTGSLLVKDPTRVMVSPFSMDVTVGESIVLPCQVSHDHSLDIVFTWTFNGHLIDFEKDGDHFERVGGQDSAGDLMIRSIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPPEAVTIDEVTDTTAQLSWRPGADNHSPITMYVVQARTPFSVGWQAVSTVPEVIDGRTLTATVVGLNPWVEYEFRVVAANLIGIGEPSSASERRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGGGFGYVVAFRPLGTVSWMQTVVASADAARYVFRNESLPPFSPYEVKVGVYNNKGEGSFSPVTVVYSAEEEPTRAPTTVLARSLSASDVEVSWAPPWENQHKGRIQGYEVRCWRHDEKEENARRIRTVGNQTSTRVSNLRGNALYHLAVRAYNTAGTGPSSAAVNVTTKKPPPSQPPGNIVWNSSDSKIILNWDQVKALDNESEVRGYKVLYRWNTQGSTSVIETNKTSVELSLPFEEDYIIEIKPFSDGGDGSSSEQIRIPKISNAYARGSGSSTSSACTLSALSTIMISLTARSSL
SIO_010081: LOC130258400
subclass of: SO_0000673
so part of: LOC130258400
location: complement(join(1618376..1618476,1619804..1619972,1621160..1621272,1621762..1621948,1622614..1622729,1623877..1624111,1625506..1625576,1625892..1626041,1628045..1628203,1629237..1629357,1630405..1630580,1648472..1648599,1663765..1663915,1667076..1667205,1669603..1669739,1679177..1679361,1679960..1680062,1684423..1684626,1701886..1701981,1715510..1715685,1716887..1717013,1742355..1742409))
location: region:1618376-1742409:-1
so has part: feature:1742355-1742409:-1:exon
so has part: feature:1716887-1717013:-1:exon
so has part: feature:1715510-1715685:-1:exon
so has part: feature:1701886-1701981:-1:exon
so has part: feature:1684423-1684626:-1:exon
so has part: feature:1679960-1680062:-1:exon
so has part: feature:1679177-1679361:-1:exon
so has part: feature:1669603-1669739:-1:exon
so has part: feature:1667076-1667205:-1:exon
so has part: feature:1663765-1663915:-1:exon
so has part: feature:1648472-1648599:-1:exon
so has part: feature:1630405-1630580:-1:exon
so has part: feature:1629237-1629357:-1:exon
so has part: feature:1628045-1628203:-1:exon
so has part: feature:1625892-1626041:-1:exon
so has part: feature:1625506-1625576:-1:exon
so has part: feature:1623877-1624111:-1:exon
so has part: feature:1622614-1622729:-1:exon
so has part: feature:1621762-1621948:-1:exon
so has part: feature:1621160-1621272:-1:exon
so has part: feature:1619804-1619972:-1:exon
so has part: feature:1618376-1618476:-1:exon

XP_056357701.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1742355-1742409:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1716887-1717013:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1715510-1715685:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1701886-1701981:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1684423-1684626:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1679960-1680062:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1679177-1679361:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1669603-1669739:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1667076-1667205:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1663765-1663915:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1648472-1648599:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1630405-1630580:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1629237-1629357:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1628045-1628203:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1625892-1626041:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1625506-1625576:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1623877-1624111:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1622614-1622729:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1621762-1621948:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1621160-1621272:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1619804-1619972:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1618376-1618476:-1:exon

LOC130258232
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: LOC130258232
note: contactin-6-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2061676..2184577)
location: region:2061676-2184577:-1
so has part: feature:2061676-2184577:-1:exon
subclass of: SO_0000010

130258232
type: Gene
SIO_000068: ncbigene

position:2061676:-1
position: 2061676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2184577:-1
position: 2184577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2061676-2184577:-1:exon

LOC130258232
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: LOC130258232
product: contactin-6-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 long SRA reads, 28 Proteins
transcript id: XM_056501415.1
SIO_010081: LOC130258232
subclass of: SO_0000673
so part of: LOC130258232
location: complement(join(2061676..2062244,2062923..2063091,2063812..2063924,2067346..2067532,2069060..2069175,2069672..2069906,2072027..2072097,2075779..2075928,2076022..2076180,2076988..2077105,2077442..2077617,2080181..2080308,2094989..2095139,2096125..2096254,2099549..2099685,2101204..2101388,2109162..2109264,2111857..2112060,2119757..2119852,2136334..2136458,2140916..2141042,2161748..2161885,2184336..2184577))
location: region:2061676-2184577:-1
so has part: feature:2184336-2184577:-1:exon
so has part: feature:2161748-2161885:-1:exon
so has part: feature:2140916-2141042:-1:exon
so has part: feature:2136334-2136458:-1:exon
so has part: feature:2119757-2119852:-1:exon
so has part: feature:2111857-2112060:-1:exon
so has part: feature:2109162-2109264:-1:exon
so has part: feature:2101204-2101388:-1:exon
so has part: feature:2099549-2099685:-1:exon
so has part: feature:2096125-2096254:-1:exon
so has part: feature:2094989-2095139:-1:exon
so has part: feature:2080181-2080308:-1:exon
so has part: feature:2077442-2077617:-1:exon
so has part: feature:2076988-2077105:-1:exon
so has part: feature:2076022-2076180:-1:exon
so has part: feature:2075779-2075928:-1:exon
so has part: feature:2072027-2072097:-1:exon
so has part: feature:2069672-2069906:-1:exon
so has part: feature:2069060-2069175:-1:exon
so has part: feature:2067346-2067532:-1:exon
so has part: feature:2063812-2063924:-1:exon
so has part: feature:2062923-2063091:-1:exon
so has part: feature:2061676-2062244:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2184336-2184577:-1:exon

position:2184336:-1
position: 2184336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2161748-2161885:-1:exon

position:2161748:-1
position: 2161748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2161885:-1
position: 2161885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2140916-2141042:-1:exon

position:2140916:-1
position: 2140916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2141042:-1
position: 2141042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2136334-2136458:-1:exon

position:2136334:-1
position: 2136334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2136458:-1
position: 2136458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2119757-2119852:-1:exon

position:2119757:-1
position: 2119757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2119852:-1
position: 2119852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2111857-2112060:-1:exon

position:2111857:-1
position: 2111857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2112060:-1
position: 2112060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2109162-2109264:-1:exon

position:2109162:-1
position: 2109162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2109264:-1
position: 2109264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2101204-2101388:-1:exon

position:2101204:-1
position: 2101204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2101388:-1
position: 2101388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2099549-2099685:-1:exon

position:2099549:-1
position: 2099549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2099685:-1
position: 2099685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2096125-2096254:-1:exon

position:2096125:-1
position: 2096125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2096254:-1
position: 2096254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2094989-2095139:-1:exon

position:2094989:-1
position: 2094989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2095139:-1
position: 2095139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2080181-2080308:-1:exon

position:2080181:-1
position: 2080181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2080308:-1
position: 2080308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2077442-2077617:-1:exon

position:2077442:-1
position: 2077442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2077617:-1
position: 2077617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2076988-2077105:-1:exon

position:2076988:-1
position: 2076988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2077105:-1
position: 2077105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2076022-2076180:-1:exon

position:2076022:-1
position: 2076022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2076180:-1
position: 2076180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2075779-2075928:-1:exon

position:2075779:-1
position: 2075779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2075928:-1
position: 2075928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2072027-2072097:-1:exon

position:2072027:-1
position: 2072027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2072097:-1
position: 2072097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2069672-2069906:-1:exon

position:2069672:-1
position: 2069672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2069906:-1
position: 2069906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2069060-2069175:-1:exon

position:2069060:-1
position: 2069060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2069175:-1
position: 2069175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2067346-2067532:-1:exon

position:2067346:-1
position: 2067346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2067532:-1
position: 2067532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2063812-2063924:-1:exon

position:2063812:-1
position: 2063812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2063924:-1
position: 2063924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2062923-2063091:-1:exon

position:2062923:-1
position: 2062923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2063091:-1
position: 2063091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2061676-2062244:-1:exon

position:2062244:-1
position: 2062244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC130258232
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: LOC130258232
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: contactin-6-like
translation: MVLLWKLISLLPFMSCSTGEETLHGPIFIQEPYDITYSMGSANPEILLNCTAKGYPLPYYRLVGGSLAINNPHKNQDIGTYQCLATNSFGTILSRKAKLQFAYLEDFETRPRSRVSVREGQGVVLLCGTPPHHGGLSYTWLFNNSALDLREDGRRFVSQATGSLYLAKVEPGDAGDYSCAVSSAQAGRRARGPATALALRTDGVMGEYEPKIEARFPERTYAAQGSSARLECFALGNPVPSISWKRSDGTSLAKKIQQNRTRGVLEIPNVEQSDEGSYECLAGNTRGINIARGQLFVYAPPEWDKKIQNAFLSLYDSLFWECKARGKPSPSYSWLKNGQPLMSEERIQIENGTLLIPMLNLSDSGLYQCVAENKYDTIYANAELRVIAAAPDFSRNPVKKLSVVQAGGEVTIACKPSASPRAAVSWRKGSEVLHQNKRVVFLEDGSLRISNISKADAGVYTCVATNQFGTARNSGNLIVKERTVISTPPSDTDATVGESIVLPCQVSHDPSLDLLFSWAFNGQRIDLSRGIHHFERIGRGSAGDLMIRNIQLHHSGKYVCTVQTSLDSQSATADIIVRGPPGPPEDVKVEHVSSTTAGLSWKPGVDNNSPVQIYSVQTRTPFSVGWQAVATAPEVINGRSHQATVVDLSPWVEYEFRVVASNSVGIGEPSSPSALLRTRAAVPVVAPTNISGGGGSRSELVITWEPVSEELQNGEGFGYIVMFRPLGSTTWTKAAVASVESSKYVYRNESITPLSPFEVKVGVYNNEGEGTLSSISIIYSGEDEPQMAPAGASALSVSAAAVEVSWLPVPWNRHTGRVLGYEVLYWIDDPKESTAGKVRVSGNVTAKNITGLRANTVYFAAVRAYNTAGTGPSSPPVNVTTKKSPPSQPPANIAWKLTDSKICLNWEHVKTMENESEVLGYKILYRQNRHSKAHILETNNTSAELLVPFEEDYLIEIRTVSDGGDGSSSEEIRIPKISSLSSGAMKLSQRINHTLTSGILLLSSVLLNPFLCWFQQCPAMDFQK
SIO_010081: LOC130258232
subclass of: SO_0000673
so part of: LOC130258232
location: complement(join(2062105..2062244,2062923..2063091,2063812..2063924,2067346..2067532,2069060..2069175,2069672..2069906,2072027..2072097,2075779..2075928,2076022..2076180,2076988..2077105,2077442..2077617,2080181..2080308,2094989..2095139,2096125..2096254,2099549..2099685,2101204..2101388,2109162..2109264,2111857..2112060,2119757..2119852,2136334..2136458,2140916..2141042,2161748..2161802))
location: region:2062105-2161802:-1
so has part: feature:2161748-2161802:-1:exon
so has part: feature:2140916-2141042:-1:exon
so has part: feature:2136334-2136458:-1:exon
so has part: feature:2119757-2119852:-1:exon
so has part: feature:2111857-2112060:-1:exon
so has part: feature:2109162-2109264:-1:exon
so has part: feature:2101204-2101388:-1:exon
so has part: feature:2099549-2099685:-1:exon
so has part: feature:2096125-2096254:-1:exon
so has part: feature:2094989-2095139:-1:exon
so has part: feature:2080181-2080308:-1:exon
so has part: feature:2077442-2077617:-1:exon
so has part: feature:2076988-2077105:-1:exon
so has part: feature:2076022-2076180:-1:exon
so has part: feature:2075779-2075928:-1:exon
so has part: feature:2072027-2072097:-1:exon
so has part: feature:2069672-2069906:-1:exon
so has part: feature:2069060-2069175:-1:exon
so has part: feature:2067346-2067532:-1:exon
so has part: feature:2063812-2063924:-1:exon
so has part: feature:2062923-2063091:-1:exon
so has part: feature:2062105-2062244:-1:exon

XP_056357390.1
type: Protein
SIO_000068: ncbiprotein

position:2062105:-1
position: 2062105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2161802:-1
position: 2161802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2161748-2161802:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2140916-2141042:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2136334-2136458:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2119757-2119852:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2111857-2112060:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2109162-2109264:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2101204-2101388:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2099549-2099685:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2096125-2096254:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2094989-2095139:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2080181-2080308:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2077442-2077617:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2076988-2077105:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2076022-2076180:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2075779-2075928:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2072027-2072097:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2069672-2069906:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2069060-2069175:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2067346-2067532:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2063812-2063924:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2062923-2063091:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2062105-2062244:-1:exon

CHL1
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: CHL1
note: cell adhesion molecule L1 like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2388238..2511509)
location: region:2388238-2511509:-1
so has part: feature:2388238-2511509:-1:exon
subclass of: SO_0000010

130258341
type: Gene
SIO_000068: ncbigene

position:2388238:-1
position: 2388238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2511509:-1
position: 2511509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2388238-2511509:-1:exon

CHL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: CHL1
product: cell adhesion molecule L1 like
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
transcript id: XM_056501616.1
SIO_010081: CHL1
subclass of: SO_0000673
so part of: CHL1
location: complement(join(2388238..2393130,2395055..2395127,2395868..2395999,2396609..2396770,2403359..2403538,2404263..2404385,2404603..2404807,2404964..2405079,2406249..2406471,2409294..2409364,2410508..2410705,2410914..2411015,2413131..2413255,2413917..2414082,2415473..2415639,2416299..2416410,2417601..2417738,2418707..2418838,2424155..2424339,2426550..2426670,2428508..2428555,2430281..2430451,2431194..2431317,2438669..2438859,2440741..2440846,2442660..2442849,2480645..2480725,2510976..2511044,2511375..2511509))
location: region:2388238-2511509:-1
so has part: feature:2511375-2511509:-1:exon
so has part: feature:2510976-2511044:-1:exon
so has part: feature:2480645-2480725:-1:exon
so has part: feature:2442660-2442849:-1:exon
so has part: feature:2440741-2440846:-1:exon
so has part: feature:2438669-2438859:-1:exon
so has part: feature:2431194-2431317:-1:exon
so has part: feature:2430281-2430451:-1:exon
so has part: feature:2428508-2428555:-1:exon
so has part: feature:2426550-2426670:-1:exon
so has part: feature:2424155-2424339:-1:exon
so has part: feature:2418707-2418838:-1:exon
so has part: feature:2417601-2417738:-1:exon
so has part: feature:2416299-2416410:-1:exon
so has part: feature:2415473-2415639:-1:exon
so has part: feature:2413917-2414082:-1:exon
so has part: feature:2413131-2413255:-1:exon
so has part: feature:2410914-2411015:-1:exon
so has part: feature:2410508-2410705:-1:exon
so has part: feature:2409294-2409364:-1:exon
so has part: feature:2406249-2406471:-1:exon
so has part: feature:2404964-2405079:-1:exon
so has part: feature:2404603-2404807:-1:exon
so has part: feature:2404263-2404385:-1:exon
so has part: feature:2403359-2403538:-1:exon
so has part: feature:2396609-2396770:-1:exon
so has part: feature:2395868-2395999:-1:exon
so has part: feature:2395055-2395127:-1:exon
so has part: feature:2388238-2393130:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2511375-2511509:-1:exon

position:2511375:-1
position: 2511375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2510976-2511044:-1:exon

position:2510976:-1
position: 2510976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2511044:-1
position: 2511044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2480645-2480725:-1:exon

position:2480645:-1
position: 2480645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2480725:-1
position: 2480725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2442660-2442849:-1:exon

position:2442660:-1
position: 2442660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2442849:-1
position: 2442849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2440741-2440846:-1:exon

position:2440741:-1
position: 2440741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2440846:-1
position: 2440846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2438669-2438859:-1:exon

position:2438669:-1
position: 2438669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2438859:-1
position: 2438859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2431194-2431317:-1:exon

position:2431194:-1
position: 2431194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2431317:-1
position: 2431317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2430281-2430451:-1:exon

position:2430281:-1
position: 2430281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2430451:-1
position: 2430451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2428508-2428555:-1:exon

position:2428508:-1
position: 2428508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2428555:-1
position: 2428555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2426550-2426670:-1:exon

position:2426550:-1
position: 2426550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2426670:-1
position: 2426670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2424155-2424339:-1:exon

position:2424155:-1
position: 2424155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2424339:-1
position: 2424339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2418707-2418838:-1:exon

position:2418707:-1
position: 2418707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2418838:-1
position: 2418838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2417601-2417738:-1:exon

position:2417601:-1
position: 2417601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2417738:-1
position: 2417738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2416299-2416410:-1:exon

position:2416299:-1
position: 2416299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2416410:-1
position: 2416410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2415473-2415639:-1:exon

position:2415473:-1
position: 2415473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2415639:-1
position: 2415639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2413917-2414082:-1:exon

position:2413917:-1
position: 2413917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2414082:-1
position: 2414082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2413131-2413255:-1:exon

position:2413131:-1
position: 2413131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2413255:-1
position: 2413255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2410914-2411015:-1:exon

position:2410914:-1
position: 2410914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2411015:-1
position: 2411015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2410508-2410705:-1:exon

position:2410508:-1
position: 2410508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2410705:-1
position: 2410705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2409294-2409364:-1:exon

position:2409294:-1
position: 2409294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2409364:-1
position: 2409364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2406249-2406471:-1:exon

position:2406249:-1
position: 2406249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2406471:-1
position: 2406471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2404964-2405079:-1:exon

position:2404964:-1
position: 2404964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2405079:-1
position: 2405079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2404603-2404807:-1:exon

position:2404603:-1
position: 2404603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2404807:-1
position: 2404807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2404263-2404385:-1:exon

position:2404263:-1
position: 2404263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2404385:-1
position: 2404385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2403359-2403538:-1:exon

position:2403359:-1
position: 2403359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2403538:-1
position: 2403538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2396609-2396770:-1:exon

position:2396609:-1
position: 2396609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2396770:-1
position: 2396770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2395868-2395999:-1:exon

position:2395868:-1
position: 2395868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2395999:-1
position: 2395999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2395055-2395127:-1:exon

position:2395055:-1
position: 2395055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2395127:-1
position: 2395127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2388238-2393130:-1:exon

position:2393130:-1
position: 2393130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: CHL1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: neural cell adhesion molecule L1-like protein
translation: MEMLLSTKGITICPFFFVLSLAAAIEIPLSVSQLPTITEQSHTQVAYPFDEDFTITCEARGNPQPTFNWTKDGKPFDLSSDPRIVASNNSGTFVIQNRGIINNFQGKYRCFASNLLGTAMSEEIELIVPSVPKFPKEKIEPLDVEHGDSVILHCNPPKGIPPLHIYWMNIDLQHIPQDERVSMSLKGDLYFANVEESDSRSDYCCFAAFPRLRTIVQKMPMTLKVSRLKHANDSGSPNAAVTKANFIKERKPKLLIPPESAGSSSSVTVIKGGVLLLECIAEGLPTPHLSWVKITGNMPKDEPETENFGKTLKIDQVTAADEGTYQCTASNALGRARHEFHVHVEEPPQWLKKPQGGVFSVGTNLVLLCEAIGSPEPSIQWKLNGMPIDGRTFRGRVSTREISLTSLQLQDSAVFQCEASNKHGSILASANVNVLNIAPLILTPDGENYATVVGYSAFLHCDIFASPAADVRWTKDESIEPLSTFRYELNKNGTLEIRDTRKEDSGSYVCWATNSVGKRAVTANLDIRDATKLVVTPKNPRVLKSHSILLKCQAEYDSHLKHSFKLSWRKDGDELPVNSTEGGRIILDRDTLFISSVLLEDQGVYTCVASTALDAAEAEAQLIVLDVPDPPEDLQLSENQNRSVRLSWRAGASHNSPVNESIIEFEENHLEPGRWQELSRVPGDGTTALLSLAPYVNYQFRVVSVNAVGRSQPSQPSLRYATPPAAPDKNPENIRVESSEPNELVMKWEPLQALERNGPGLEYRVSWRQRGVESEWNEELVKRHSLSVKNVPTFVPYEVKVQAVNDLGAGPEPNITVGYSGEDVPDAAPSGVSVEIVNSTLVKVFWLGIPRDRVRGHLRGYKVNWWKTKSMLDGKRHHQEKHFLKFEGDRNSGMIPGLDPFSEFHLTVLAYNSRGDGPESSPVTFETPEGVPEQPRFLRIMSFDKDSVTLSWGLPKKANGHLTGYILQYQIINETRAVGAVSDVSVSNRSVQSWRLAGLSPSTRYKFYIKACTAKGCGKAATEEGLTLAQGGKGSSRISDAVKPTPKVQPSEALEPGTEYTIRLVTKNWVDNNSIFEDVIETRGRAYAGIYEGISTQGWFIGLMCAIALLTLLLLTICFVRRNKGGKYSVKEKEDLHPDPEAQSIKDEIFGEYSDSDEKPLKGSLQSLNGDIKATGSADSLVDYGEGEHGMFNEDGSFIGAYSGSKEKGSVESTGSSTATFPLHA
SIO_010081: CHL1
subclass of: SO_0000673
so part of: CHL1
location: complement(join(2392914..2393130,2395055..2395127,2395868..2395999,2396609..2396770,2403359..2403538,2404263..2404385,2404603..2404807,2404964..2405079,2406249..2406471,2409294..2409364,2410508..2410705,2410914..2411015,2413131..2413255,2413917..2414082,2415473..2415639,2416299..2416410,2417601..2417738,2418707..2418838,2424155..2424339,2426550..2426670,2428508..2428555,2430281..2430451,2431194..2431317,2438669..2438859,2440741..2440846,2442660..2442750))
location: region:2392914-2442750:-1
so has part: feature:2442660-2442750:-1:exon
so has part: feature:2440741-2440846:-1:exon
so has part: feature:2438669-2438859:-1:exon
so has part: feature:2431194-2431317:-1:exon
so has part: feature:2430281-2430451:-1:exon
so has part: feature:2428508-2428555:-1:exon
so has part: feature:2426550-2426670:-1:exon
so has part: feature:2424155-2424339:-1:exon
so has part: feature:2418707-2418838:-1:exon
so has part: feature:2417601-2417738:-1:exon
so has part: feature:2416299-2416410:-1:exon
so has part: feature:2415473-2415639:-1:exon
so has part: feature:2413917-2414082:-1:exon
so has part: feature:2413131-2413255:-1:exon
so has part: feature:2410914-2411015:-1:exon
so has part: feature:2410508-2410705:-1:exon
so has part: feature:2409294-2409364:-1:exon
so has part: feature:2406249-2406471:-1:exon
so has part: feature:2404964-2405079:-1:exon
so has part: feature:2404603-2404807:-1:exon
so has part: feature:2404263-2404385:-1:exon
so has part: feature:2403359-2403538:-1:exon
so has part: feature:2396609-2396770:-1:exon
so has part: feature:2395868-2395999:-1:exon
so has part: feature:2395055-2395127:-1:exon
so has part: feature:2392914-2393130:-1:exon

XP_056357591.1
type: Protein
SIO_000068: ncbiprotein

position:2392914:-1
position: 2392914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2442750:-1
position: 2442750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2442660-2442750:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2440741-2440846:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2438669-2438859:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2431194-2431317:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2430281-2430451:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2428508-2428555:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2426550-2426670:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2424155-2424339:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2418707-2418838:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2417601-2417738:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2416299-2416410:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2415473-2415639:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2413917-2414082:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2413131-2413255:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2410914-2411015:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2410508-2410705:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2409294-2409364:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2406249-2406471:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2404964-2405079:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2404603-2404807:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2404263-2404385:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2403359-2403538:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2396609-2396770:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2395868-2395999:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2395055-2395127:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2392914-2393130:-1:exon

CNTN3
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: CNTN3
note: contactin 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2722039..2816687
location: region:2722039-2816687:1
so has part: feature:2722039-2816687:1:exon
subclass of: SO_0000010

130258457
type: Gene
SIO_000068: ncbigene

position:2722039:1
position: 2722039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2816687:1
position: 2816687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2722039-2816687:1:exon

CNTN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: CNTN3
product: contactin 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 long SRA reads, 16 Proteins
transcript id: XM_056501850.1
SIO_010081: CNTN3
subclass of: SO_0000673
so part of: CNTN3
location: join(2722039..2722152,2744616..2744752,2766766..2766861,2778548..2778787,2779625..2779727,2780688..2780872,2788651..2788787,2790810..2790939,2791993..2792143,2799677..2799804,2801056..2801231,2803789..2803906,2804949..2805107,2805185..2805334,2806145..2806215,2807396..2807630,2809090..2809205,2809771..2809957,2812969..2813081,2814687..2816687)
location: region:2722039-2816687:1
so has part: feature:2722039-2722152:1:exon
so has part: feature:2744616-2744752:1:exon
so has part: feature:2766766-2766861:1:exon
so has part: feature:2778548-2778787:1:exon
so has part: feature:2779625-2779727:1:exon
so has part: feature:2780688-2780872:1:exon
so has part: feature:2788651-2788787:1:exon
so has part: feature:2790810-2790939:1:exon
so has part: feature:2791993-2792143:1:exon
so has part: feature:2799677-2799804:1:exon
so has part: feature:2801056-2801231:1:exon
so has part: feature:2803789-2803906:1:exon
so has part: feature:2804949-2805107:1:exon
so has part: feature:2805185-2805334:1:exon
so has part: feature:2806145-2806215:1:exon
so has part: feature:2807396-2807630:1:exon
so has part: feature:2809090-2809205:1:exon
so has part: feature:2809771-2809957:1:exon
so has part: feature:2812969-2813081:1:exon
so has part: feature:2814687-2816687:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2722039-2722152:1:exon

position:2722152:1
position: 2722152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2744616-2744752:1:exon

position:2744616:1
position: 2744616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2744752:1
position: 2744752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2766766-2766861:1:exon

position:2766766:1
position: 2766766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2766861:1
position: 2766861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2778548-2778787:1:exon

position:2778548:1
position: 2778548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2778787:1
position: 2778787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2779625-2779727:1:exon

position:2779625:1
position: 2779625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2779727:1
position: 2779727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2780688-2780872:1:exon

position:2780688:1
position: 2780688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2780872:1
position: 2780872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2788651-2788787:1:exon

position:2788651:1
position: 2788651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2788787:1
position: 2788787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2790810-2790939:1:exon

position:2790810:1
position: 2790810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2790939:1
position: 2790939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2791993-2792143:1:exon

position:2791993:1
position: 2791993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2792143:1
position: 2792143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2799677-2799804:1:exon

position:2799677:1
position: 2799677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2799804:1
position: 2799804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2801056-2801231:1:exon

position:2801056:1
position: 2801056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2801231:1
position: 2801231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2803789-2803906:1:exon

position:2803789:1
position: 2803789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2803906:1
position: 2803906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2804949-2805107:1:exon

position:2804949:1
position: 2804949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2805107:1
position: 2805107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2805185-2805334:1:exon

position:2805185:1
position: 2805185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2805334:1
position: 2805334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2806145-2806215:1:exon

position:2806145:1
position: 2806145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2806215:1
position: 2806215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2807396-2807630:1:exon

position:2807396:1
position: 2807396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2807630:1
position: 2807630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2809090-2809205:1:exon

position:2809090:1
position: 2809090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2809205:1
position: 2809205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2809771-2809957:1:exon

position:2809771:1
position: 2809771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2809957:1
position: 2809957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2812969-2813081:1:exon

position:2812969:1
position: 2812969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2813081:1
position: 2813081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2814687-2816687:1:exon

position:2814687:1
position: 2814687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CNTN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: CNTN3
product: contactin 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 87 long SRA reads, 31 Proteins
transcript id: XM_056501849.1
SIO_010081: CNTN3
subclass of: SO_0000673
so part of: CNTN3
location: join(2722039..2722152,2744616..2744752,2766766..2766861,2778548..2778787,2779625..2779727,2780688..2780872,2788651..2788787,2790810..2790939,2791993..2792143,2799677..2799804,2801056..2801231,2803789..2803906,2804949..2805107,2805185..2805334,2806145..2806215,2807396..2807630,2809090..2809205,2809771..2809957,2812969..2813081,2813967..2814135,2814687..2816684)
location: region:2722039-2816684:1
so has part: feature:2722039-2722152:1:exon
so has part: feature:2744616-2744752:1:exon
so has part: feature:2766766-2766861:1:exon
so has part: feature:2778548-2778787:1:exon
so has part: feature:2779625-2779727:1:exon
so has part: feature:2780688-2780872:1:exon
so has part: feature:2788651-2788787:1:exon
so has part: feature:2790810-2790939:1:exon
so has part: feature:2791993-2792143:1:exon
so has part: feature:2799677-2799804:1:exon
so has part: feature:2801056-2801231:1:exon
so has part: feature:2803789-2803906:1:exon
so has part: feature:2804949-2805107:1:exon
so has part: feature:2805185-2805334:1:exon
so has part: feature:2806145-2806215:1:exon
so has part: feature:2807396-2807630:1:exon
so has part: feature:2809090-2809205:1:exon
so has part: feature:2809771-2809957:1:exon
so has part: feature:2812969-2813081:1:exon
so has part: feature:2813967-2814135:1:exon
so has part: feature:2814687-2816684:1:exon

position:2816684:1
position: 2816684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2722039-2722152:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2744616-2744752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2766766-2766861:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2778548-2778787:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2779625-2779727:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2780688-2780872:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2788651-2788787:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2790810-2790939:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2791993-2792143:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2799677-2799804:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2801056-2801231:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2803789-2803906:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2804949-2805107:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2805185-2805334:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2806145-2806215:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2807396-2807630:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2809090-2809205:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2809771-2809957:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2812969-2813081:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2813967-2814135:1:exon

position:2813967:1
position: 2813967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2814135:1
position: 2814135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2814687-2816684:1:exon

CNTN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: CNTN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: contactin-3 isoform X1
translation: MLLLLWEQLFLVSLVGCLADVESSRTKMRSAVSVREGQGVVLLCGTPPQAGEVSFAWIFNEYPSFVQEDSRRFVSQETGHLYIAKVEPSDVGNYSCVVTSRASSRAGSRAGSRASSSPALGSPTPLVLRTDGVMGEYEPKIEVQFPETLAAAKGSTVKLECFALGNPVPQINWRRTDGLPFPSKIKLRKSNGMIEIPNFQQEDAGLYECITENSRGKNIARGRLTYYAKPHWLQTIQDVEVAVEDTLFWDCRASGKPKPSYRWLKNGEQLAIEGRIQIENGALTISNLNLTDSGRYQCIAENKHGVISSSAELRVVASAPDFSKSPMKKLIQVQIGSTVDFECKPKAFPKAKCSWKKGGEQLHENERITLLKDGGLRIANVTKGDAGSYTCLATNQFGTARGSTSLVVTEPTRITLAPSNMDVTVGESVVLPCQVQHDPLLDISFTWYFNGTLTDLQGETSHFEKVGGSASGDLMIRNIQLKHSGKYVCMVKTEVDSVASAADLIVRGSPGPPGQVRVDEITDTTAQISWQEGTDNHSPVTTYSIQARTPFSVGWQRATTVPDVIDGKTFTSTVVDLNPWVEYEFRVVATNKIGGGEPSLPSEKVRTEEAVPEIPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPSGTSTWIQTVVTSPDTPRYVFRNESILPFSPYEVKVGVYNNKGEGPFSAVATVYSAEEEPSTAPAGVSATSLSSSAIQVSWAAIPWKMSNGRLLGYEVRYWNNDQKEESSNRVKAAGNETSIKITGLRSNLAYYTAVRAYNSAGAGPFSATVNATTKKPPPSQPPGNVVWNVTDSRVILSWEEVRAMDNESEVTGYKVLYRTSRQGREEVLSTARTTAELWLRLQDDYLIEVRATSEGGDGTSSEQILIPRLASMDARGSGPSVLSIFTISSFLATIFSLTLNSMLC
SIO_010081: CNTN3
subclass of: SO_0000673
so part of: CNTN3
location: join(2744695..2744752,2766766..2766861,2778548..2778787,2779625..2779727,2780688..2780872,2788651..2788787,2790810..2790939,2791993..2792143,2799677..2799804,2801056..2801231,2803789..2803906,2804949..2805107,2805185..2805334,2806145..2806215,2807396..2807630,2809090..2809205,2809771..2809957,2812969..2813081,2813967..2814135,2814687..2814790)
location: region:2744695-2814790:1
so has part: feature:2744695-2744752:1:exon
so has part: feature:2766766-2766861:1:exon
so has part: feature:2778548-2778787:1:exon
so has part: feature:2779625-2779727:1:exon
so has part: feature:2780688-2780872:1:exon
so has part: feature:2788651-2788787:1:exon
so has part: feature:2790810-2790939:1:exon
so has part: feature:2791993-2792143:1:exon
so has part: feature:2799677-2799804:1:exon
so has part: feature:2801056-2801231:1:exon
so has part: feature:2803789-2803906:1:exon
so has part: feature:2804949-2805107:1:exon
so has part: feature:2805185-2805334:1:exon
so has part: feature:2806145-2806215:1:exon
so has part: feature:2807396-2807630:1:exon
so has part: feature:2809090-2809205:1:exon
so has part: feature:2809771-2809957:1:exon
so has part: feature:2812969-2813081:1:exon
so has part: feature:2813967-2814135:1:exon
so has part: feature:2814687-2814790:1:exon

XP_056357824.1
type: Protein
SIO_000068: ncbiprotein

position:2744695:1
position: 2744695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2814790:1
position: 2814790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2744695-2744752:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2766766-2766861:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2778548-2778787:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2779625-2779727:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2780688-2780872:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2788651-2788787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2790810-2790939:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2791993-2792143:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2799677-2799804:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2801056-2801231:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2803789-2803906:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2804949-2805107:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2805185-2805334:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2806145-2806215:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2807396-2807630:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2809090-2809205:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2809771-2809957:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2812969-2813081:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2813967-2814135:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2814687-2814790:1:exon

CNTN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: CNTN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: contactin-3 isoform X2
translation: MLLLLWEQLFLVSLVGCLADVESSRTKMRSAVSVREGQGVVLLCGTPPQAGEVSFAWIFNEYPSFVQEDSRRFVSQETGHLYIAKVEPSDVGNYSCVVTSRASSRAGSRAGSRASSSPALGSPTPLVLRTDGVMGEYEPKIEVQFPETLAAAKGSTVKLECFALGNPVPQINWRRTDGLPFPSKIKLRKSNGMIEIPNFQQEDAGLYECITENSRGKNIARGRLTYYAKPHWLQTIQDVEVAVEDTLFWDCRASGKPKPSYRWLKNGEQLAIEGRIQIENGALTISNLNLTDSGRYQCIAENKHGVISSSAELRVVASAPDFSKSPMKKLIQVQIGSTVDFECKPKAFPKAKCSWKKGGEQLHENERITLLKDGGLRIANVTKGDAGSYTCLATNQFGTARGSTSLVVTEPTRITLAPSNMDVTVGESVVLPCQVQHDPLLDISFTWYFNGTLTDLQGETSHFEKVGGSASGDLMIRNIQLKHSGKYVCMVKTEVDSVASAADLIVRGSPGPPGQVRVDEITDTTAQISWQEGTDNHSPVTTYSIQARTPFSVGWQRATTVPDVIDGKTFTSTVVDLNPWVEYEFRVVATNKIGGGEPSLPSEKVRTEEAVPEIPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPSGTSTWIQTVVTSPDTPRYVFRNESILPFSPYEVKVGVYNNKGEGPFSAVATVYSAEEEPSTAPAGVSATSLSSSAIQVSWAAIPWKMSNGRLLGYEVRYWNNDQKEESSNRVKAAGNETSIKITGLRSNLAYYTAVRAYNSAGAGPFSATVNATTKKPPPSQPPGNVVWNVTDSRVILSWEEVRAMDNESEVTGYKVWMQEVLVHQS
SIO_010081: CNTN3
subclass of: SO_0000673
so part of: CNTN3
location: join(2744695..2744752,2766766..2766861,2778548..2778787,2779625..2779727,2780688..2780872,2788651..2788787,2790810..2790939,2791993..2792143,2799677..2799804,2801056..2801231,2803789..2803906,2804949..2805107,2805185..2805334,2806145..2806215,2807396..2807630,2809090..2809205,2809771..2809957,2812969..2813081,2814687..2814722)
location: region:2744695-2814722:1
so has part: feature:2744695-2744752:1:exon
so has part: feature:2766766-2766861:1:exon
so has part: feature:2778548-2778787:1:exon
so has part: feature:2779625-2779727:1:exon
so has part: feature:2780688-2780872:1:exon
so has part: feature:2788651-2788787:1:exon
so has part: feature:2790810-2790939:1:exon
so has part: feature:2791993-2792143:1:exon
so has part: feature:2799677-2799804:1:exon
so has part: feature:2801056-2801231:1:exon
so has part: feature:2803789-2803906:1:exon
so has part: feature:2804949-2805107:1:exon
so has part: feature:2805185-2805334:1:exon
so has part: feature:2806145-2806215:1:exon
so has part: feature:2807396-2807630:1:exon
so has part: feature:2809090-2809205:1:exon
so has part: feature:2809771-2809957:1:exon
so has part: feature:2812969-2813081:1:exon
so has part: feature:2814687-2814722:1:exon

XP_056357825.1
type: Protein
SIO_000068: ncbiprotein

position:2814722:1
position: 2814722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2744695-2744752:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2766766-2766861:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2778548-2778787:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2779625-2779727:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2780688-2780872:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2788651-2788787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2790810-2790939:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2791993-2792143:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2799677-2799804:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2801056-2801231:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2803789-2803906:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2804949-2805107:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2805185-2805334:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2806145-2806215:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2807396-2807630:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2809090-2809205:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2809771-2809957:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2812969-2813081:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2814687-2814722:1:exon

PDZRN3
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: PDZRN3
note: PDZ domain containing ring finger 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2971303..3100683
location: region:2971303-3100683:1
so has part: feature:2971303-3100683:1:exon
subclass of: SO_0000010

130258381
type: Gene
SIO_000068: ncbigene

position:2971303:1
position: 2971303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3100683:1
position: 3100683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2971303-3100683:1:exon

PDZRN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: PDZRN3
product: PDZ domain containing ring finger 3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501698.1
SIO_010081: PDZRN3
subclass of: SO_0000673
so part of: PDZRN3
location: join(2971303..2972262,2977816..2977902,2978981..2979088,3084011..3084255,3087413..3087500,3094504..3094602,3095154..3095216,3096056..3096157,3097228..3097344,3098236..3100683)
location: region:2971303-3100683:1
so has part: feature:2971303-2972262:1:exon
so has part: feature:2977816-2977902:1:exon
so has part: feature:2978981-2979088:1:exon
so has part: feature:3084011-3084255:1:exon
so has part: feature:3087413-3087500:1:exon
so has part: feature:3094504-3094602:1:exon
so has part: feature:3095154-3095216:1:exon
so has part: feature:3096056-3096157:1:exon
so has part: feature:3097228-3097344:1:exon
so has part: feature:3098236-3100683:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2971303-2972262:1:exon

position:2972262:1
position: 2972262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2977816-2977902:1:exon

position:2977816:1
position: 2977816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2977902:1
position: 2977902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2978981-2979088:1:exon

position:2978981:1
position: 2978981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2979088:1
position: 2979088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3084011-3084255:1:exon

position:3084011:1
position: 3084011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3084255:1
position: 3084255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3087413-3087500:1:exon

position:3087413:1
position: 3087413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3087500:1
position: 3087500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3094504-3094602:1:exon

position:3094504:1
position: 3094504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3094602:1
position: 3094602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3095154-3095216:1:exon

position:3095154:1
position: 3095154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3095216:1
position: 3095216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3096056-3096157:1:exon

position:3096056:1
position: 3096056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3096157:1
position: 3096157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3097228-3097344:1:exon

position:3097228:1
position: 3097228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3097344:1
position: 3097344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3098236-3100683:1:exon

position:3098236:1
position: 3098236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PDZRN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: PDZRN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase PDZRN3
translation: MGFELDRFSGEVDPDFKCNLCNKVLEDPLTTPCGHVFCAGCVLPWVVQQGSCPVNCQRISTKELNHVLPLKSLILKLDIKCDNHARGCEAVVPLQHLGEHAETCDFSPAKCRNRGCRQVLNLRDVEAHMRERCEARPAGLCEQGCGLVLTHGERRAGGHGCLRALRAHGAALQARAAALEKALKKEALRAGKREQSLLSRLAAAQLELQVTALRYQKRFTQYSARLDALARARAASPGKGEETKALTLVLHRDSGSLGFNIIGGRPCVDNQDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIMEVNGKDLSKATHEQAVEAFKTAKEPIVVQVLRRAPRPKGFPSAHEPQLVDVGTQTDITFQHILALSKMGSPGPVLEPYLLPEDHPSVHEYYDPNDYMGGIHQEMDRDELELEEVDLHRVNSQDKLGLTVCYRTDDEDDMGIYVSEIDPNSIAAKDGRLREGDRIIQINGIEVQNREEAVALLSSEESKNISLLVARPEIQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTASMLQQKKQEEDGGTTDTATILSNQHEKDSGVGRTDDSTRNDESSEQENNGDDHTTSSNTLGSQKKLTYSHDTLGSGDMQFSNESFISADCTDVDFLGIPVDECERFRELLELKCQVKSASPYSLYYHNSSLEMSKSDQESVDRELEMLNEELRNIELECLNIVRAHKMQQLKEQYREPWMLHNSGFRNYNTSIDARRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLETSPDNSLRRTADGVGCQGSEGAAAHSASQKGLFAGPESREAGAGKCHAAAKDPELGKQLESKERKGSDGSKSPTQGQKGSGSIASPYHHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSMCKDLGQSEPRMEWKVKVRSDGTRYITKRPVRDRLLRERAIKIKEERSGMTTDDDAISEMKMGRYWSKEERKQHLVKAKEQRRRREFMMQSRLECLKEQQGAEEKKEMNIIELSHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
SIO_010081: PDZRN3
subclass of: SO_0000673
so part of: PDZRN3
location: join(2971546..2972262,2977816..2977902,2978981..2979088,3084011..3084255,3087413..3087500,3094504..3094602,3095154..3095216,3096056..3096157,3097228..3097344,3098236..3099780)
location: region:2971546-3099780:1
so has part: feature:2971546-2972262:1:exon
so has part: feature:2977816-2977902:1:exon
so has part: feature:2978981-2979088:1:exon
so has part: feature:3084011-3084255:1:exon
so has part: feature:3087413-3087500:1:exon
so has part: feature:3094504-3094602:1:exon
so has part: feature:3095154-3095216:1:exon
so has part: feature:3096056-3096157:1:exon
so has part: feature:3097228-3097344:1:exon
so has part: feature:3098236-3099780:1:exon

XP_056357673.1
type: Protein
SIO_000068: ncbiprotein

position:2971546:1
position: 2971546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3099780:1
position: 3099780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2971546-2972262:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2977816-2977902:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2978981-2979088:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3084011-3084255:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3087413-3087500:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3094504-3094602:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3095154-3095216:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3096056-3096157:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3097228-3097344:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3098236-3099780:1:exon

PPP4R2
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: PPP4R2
note: protein phosphatase 4 regulatory subunit 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3147075..3174162)
location: region:3147075-3174162:-1
so has part: feature:3147075-3174162:-1:exon
subclass of: SO_0000010

130258149
type: Gene
SIO_000068: ncbigene

position:3147075:-1
position: 3147075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3174162:-1
position: 3174162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3147075-3174162:-1:exon

PPP4R2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: PPP4R2
product: protein phosphatase 4 regulatory subunit 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501269.1
SIO_010081: PPP4R2
subclass of: SO_0000673
so part of: PPP4R2
location: complement(join(3147075..3149410,3150368..3150636,3150912..3151055,3151428..3151502,3151808..3151845,3152678..3152771,3157233..3157403,3173201..3173282,3173979..3174162))
location: region:3147075-3174162:-1
so has part: feature:3173979-3174162:-1:exon
so has part: feature:3173201-3173282:-1:exon
so has part: feature:3157233-3157403:-1:exon
so has part: feature:3152678-3152771:-1:exon
so has part: feature:3151808-3151845:-1:exon
so has part: feature:3151428-3151502:-1:exon
so has part: feature:3150912-3151055:-1:exon
so has part: feature:3150368-3150636:-1:exon
so has part: feature:3147075-3149410:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3173979-3174162:-1:exon

position:3173979:-1
position: 3173979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3173201-3173282:-1:exon

position:3173201:-1
position: 3173201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3173282:-1
position: 3173282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3157233-3157403:-1:exon

position:3157233:-1
position: 3157233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3157403:-1
position: 3157403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3152678-3152771:-1:exon

position:3152678:-1
position: 3152678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3152771:-1
position: 3152771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3151808-3151845:-1:exon

position:3151808:-1
position: 3151808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3151845:-1
position: 3151845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3151428-3151502:-1:exon

position:3151428:-1
position: 3151428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3151502:-1
position: 3151502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3150912-3151055:-1:exon

position:3150912:-1
position: 3150912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3151055:-1
position: 3151055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3150368-3150636:-1:exon

position:3150368:-1
position: 3150368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3150636:-1
position: 3150636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3147075-3149410:-1:exon

position:3149410:-1
position: 3149410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPP4R2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: PPP4R2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 4 regulatory subunit 2
translation: MDVERLQEALKDFEKRGKKEVCPILDQFLCHVAKTGETMVQWSQFKGYFIFKLEKVMDDFRTSAPEPRGPPNPNVEYIPFEEMKERILKIVTGFNGIPFTIQRLCELLTDPRRNYTGTDKFLRGVEKNVMVVSCVYPSSEKNNSSSLNRMNGVMFPGNSPGYTDRSNVNGPGTPRPVSRTKVSLSAPMTTNGLPDSTEHKEPSLQQTEDKKHSESPASESEGAQSSPVKNKHSEDDPAEAEGHEVKRLKFDKEGETRDAPNQTASSEVSSGMGEETEASSTTQDKEKDATCARQQCTEEEEEESFMSPRNVGQDRKDQEKDSDSSSVAEESSEESSQMEESEQPRAEKDLHSADSSISASATSAADCSDTEELGSCASETADNSSETPMENSDEATEAADEPMEQD
SIO_010081: PPP4R2
subclass of: SO_0000673
so part of: PPP4R2
location: complement(join(3149097..3149410,3150368..3150636,3150912..3151055,3151428..3151502,3151808..3151845,3152678..3152771,3157233..3157403,3173201..3173282,3173979..3174012))
location: region:3149097-3174012:-1
so has part: feature:3173979-3174012:-1:exon
so has part: feature:3173201-3173282:-1:exon
so has part: feature:3157233-3157403:-1:exon
so has part: feature:3152678-3152771:-1:exon
so has part: feature:3151808-3151845:-1:exon
so has part: feature:3151428-3151502:-1:exon
so has part: feature:3150912-3151055:-1:exon
so has part: feature:3150368-3150636:-1:exon
so has part: feature:3149097-3149410:-1:exon

XP_056357244.1
type: Protein
SIO_000068: ncbiprotein

position:3149097:-1
position: 3149097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3174012:-1
position: 3174012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3173979-3174012:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3173201-3173282:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3157233-3157403:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3152678-3152771:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3151808-3151845:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3151428-3151502:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3150912-3151055:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3150368-3150636:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3149097-3149410:-1:exon

GXYLT2
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: GXYLT2
note: glucoside xylosyltransferase 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3176904..3197888)
location: region:3176904-3197888:-1
so has part: feature:3176904-3197888:-1:exon
subclass of: SO_0000010

130258411
type: Gene
SIO_000068: ncbigene

position:3176904:-1
position: 3176904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3197888:-1
position: 3197888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3176904-3197888:-1:exon

GXYLT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: GXYLT2
product: glucoside xylosyltransferase 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501740.1
SIO_010081: GXYLT2
subclass of: SO_0000673
so part of: GXYLT2
location: complement(join(3176904..3180822,3181427..3181599,3183825..3183948,3184888..3185139,3190843..3190974,3191175..3191364,3197595..3197888))
location: region:3176904-3197888:-1
so has part: feature:3197595-3197888:-1:exon
so has part: feature:3191175-3191364:-1:exon
so has part: feature:3190843-3190974:-1:exon
so has part: feature:3184888-3185139:-1:exon
so has part: feature:3183825-3183948:-1:exon
so has part: feature:3181427-3181599:-1:exon
so has part: feature:3176904-3180822:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3197595-3197888:-1:exon

position:3197595:-1
position: 3197595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3191175-3191364:-1:exon

position:3191175:-1
position: 3191175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3191364:-1
position: 3191364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3190843-3190974:-1:exon

position:3190843:-1
position: 3190843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3190974:-1
position: 3190974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3184888-3185139:-1:exon

position:3184888:-1
position: 3184888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3185139:-1
position: 3185139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3183825-3183948:-1:exon

position:3183825:-1
position: 3183825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3183948:-1
position: 3183948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3181427-3181599:-1:exon

position:3181427:-1
position: 3181427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3181599:-1
position: 3181599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3176904-3180822:-1:exon

position:3180822:-1
position: 3180822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GXYLT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2939378
gene: GXYLT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucoside xylosyltransferase 2
translation: MRRPCKVAAALLCLAVLLLLYLLAGSAAPPPAPSAPARRPPRLGRSPPRRSPAGGASARKPGEQKHPKEPSSLQCMHLAVVACGDRLEETLIMLKSAVLFSSNRLCFHIFAEDSLKPEFEKKLKEWPSSYTKKFESNIYPITFSVGNAQEWKKLFKPCAAQRLFLPVILKDVDSLLYVDTDVLFLRPIDDIWHLLREFNSTQLAAMAPEHEVPKIGWYSRFARHPYYGSTGLNSGVMLMNLTRIRSTHFKNSLIPGGLTWEEMLYPLYQKYKNYITWGDQDLLNIIFYFNPECLYVFPCQWNYRPDHCMYGSNCRGAEAEGVSILHGNRGVYHDDKQPTFRALYEVIRDFPFEDNLFQSLYYPLQSKFLDTVHTLCGRIPQVFLKQIEKTMKKVYENRVIVYLGANHRY
SIO_010081: GXYLT2
subclass of: SO_0000673
so part of: GXYLT2
location: complement(join(3180640..3180822,3181427..3181599,3183825..3183948,3184888..3185139,3190843..3190974,3191175..3191364,3197595..3197770))
location: region:3180640-3197770:-1
so has part: feature:3197595-3197770:-1:exon
so has part: feature:3191175-3191364:-1:exon
so has part: feature:3190843-3190974:-1:exon
so has part: feature:3184888-3185139:-1:exon
so has part: feature:3183825-3183948:-1:exon
so has part: feature:3181427-3181599:-1:exon
so has part: feature:3180640-3180822:-1:exon

XP_056357715.1
type: Protein
SIO_000068: ncbiprotein

position:3180640:-1
position: 3180640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3197770:-1
position: 3197770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3197595-3197770:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3191175-3191364:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3190843-3190974:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3184888-3185139:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3183825-3183948:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3181427-3181599:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3180640-3180822:-1:exon

SHQ1
type: Gene
subclass of: SO_0000704
RO_0002162: 2939378
gene: SHQ1
note: SHQ1, H/ACA ribonucleoprotein assembly factor; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3201005..3238801
location: region:3201005-3238801:1
so has part: feature:3201005-3238801:1:exon
subclass of: SO_0000010

130258456
type: Gene
SIO_000068: ncbigene

position:3201005:1
position: 3201005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3238801:1
position: 3238801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3201005-3238801:1:exon

SHQ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 2939378
gene: SHQ1
product: SHQ1, H/ACA ribonucleoprotein assembly factor, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_056501848.1
SIO_010081: SHQ1
subclass of: SO_0000673
so part of: SHQ1
location: join(3201005..3201059,3203040..3203222,3203687..3203751,3204199..3204321,3205098..3205240,3205915..3206027,3207882..3208009,3213256..3213410,3214648..3214701,3216527..3216650,3219308..3219428,3237626..3238801)
location: region:3201005-3238801:1
so has part: feature:3201005-3201059:1:exon
so has part: feature:3203040-3203222:1:exon
so has part: feature:3203687-3203751:1:exon
so has part: feature:3204199-3204321:1:exon
so has part: feature:3205098-3205240:1:exon
so has part: feature:3205915-3206027:1:exon
so has part: feature:3207882-3208009:1:exon
so has part: feature:3213256-3213410:1:exon
so has part: feature:3214648-3214701:1:exon
so has part: feature:3216527-3216650:1:exon
so has part: feature:3219308-3219428:1:exon
so has part: feature:3237626-3238801:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3201005-3201059:1:exon

position:3201059:1
position: 3201059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3203040-3203222:1:exon

position:3203040:1
position: 3203040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3203222:1
position: 3203222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3203687-3203751:1:exon

position:3203687:1
position: 3203687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3203751:1
position: 3203751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3204199-3204321:1:exon

position:3204199:1
position: 3204199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3204321:1
position: 3204321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3205098-3205240:1:exon

position:3205098:1
position: 3205098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3205240:1
position: 3205240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3205915-3206027:1:exon

position:3205915:1
position: 3205915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3206027:1
position: 3206027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3207882-3208009:1:exon

position:3207882:1
position: 3207882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3208009:1
position: 3208009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3213256-3213410:1:exon

position:3213256:1
position: 3213256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3213410:1
position: 3213410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3214648-3214701:1:exon

position:3214648:1
position: 3214648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3214701:1
position: 3214701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3216527-3216650:1:exon

position:3216527:1
position: 3216527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3216650:1
position: 3216650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3219308-3219428:1:exon

position:3219308:1
position: 3219308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition