Halocatena salina strain AD-1 plasmid unnamed3, complete sequence.
Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Halobacteriales; Haloarculaceae; Halocatena.
Halocatena sp. nov., isolated from a salt lake
Submitted (18-APR-2022) School of Food and Biological Engineering, Jiangsu University, 301 Xuefu Road, Zhenjiang, Jiangsu 212013, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP096022.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 4\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 477.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 07/30/2023 12:09:13\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,895\nCDSs (total) :: 3,844\nGenes (coding) :: 3,747\nCDSs (with protein) :: 3,747\nGenes (RNA) :: 51\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 46\nncRNAs :: 2\nPseudo Genes (total) :: 97\nCDSs (without protein) :: 97\nPseudo Genes (ambiguous residues) :: 0 of 97\nPseudo Genes (frameshifted) :: 49 of 97\nPseudo Genes (incomplete) :: 70 of 97\nPseudo Genes (internal stop) :: 27 of 97\nPseudo Genes (multiple problems) :: 39 of 97\nCRISPR Arrays :: 10\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_007538712.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF036452.2
COORDINATES: protein motif:HMM:TIGR02228.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018243.2
COORDINATES: similar to AA sequence:RefSeq:WP_012660246.1
orc1/cdc6 family replication initiation protein
COORDINATES: similar to AA sequence:RefSeq:WP_013875720.1
COORDINATES: similar to AA sequence:RefSeq:WP_015911164.1
GO:0008381 - mechanosensitive monoatomic ion channel activity [Evidence IEA]
mechanosensitive ion channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005538439.1
nucleotidyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF016408.2
COORDINATES: similar to AA sequence:RefSeq:WP_006106791.1
COORDINATES: protein motif:HMM:NF025851.2
glycoside hydrolase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012995.2
GO:0016407 - acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004062166.1
COORDINATES: protein motif:HMM:NF020032.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007736995.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008419542.1
glutathione-independent formaldehyde dehydrogenase
COORDINATES: protein motif:HMM:NF017758.2
COORDINATES: similar to AA sequence:RefSeq:WP_008388820.1
COORDINATES: protein motif:HMM:NF022072.2
COORDINATES: similar to AA sequence:RefSeq:WP_011347320.1
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0004024 - alcohol dehydrogenase activity, zinc-dependent [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006666997.1
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008416611.1
COORDINATES: similar to AA sequence:RefSeq:WP_005557346.1
GO:0019239 - deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007692983.1
COORDINATES: similar to AA sequence:RefSeq:WP_012289586.1
TaqI-like C-terminal specificity domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004055925.1
COORDINATES: similar to AA sequence:RefSeq:WP_012289629.1
biotin/lipoate A/B protein ligase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012943282.1
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006432220.1
COORDINATES: similar to AA sequence:RefSeq:WP_006432219.1
COORDINATES: similar to AA sequence:RefSeq:WP_006665351.1
rhodanese-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008443829.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]
GO:0009307 - DNA restriction-modification system [Evidence IEA]
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: similar to AA sequence:RefSeq:WP_015320620.1
TFIIB-type zinc ribbon-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008007011.1
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008414491.1
COORDINATES: similar to AA sequence:RefSeq:WP_008388326.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008523888.1
COORDINATES: similar to AA sequence:RefSeq:WP_015788630.1
GO:0008880 - glucuronate isomerase activity [Evidence IEA]
GO:0006064 - glucuronate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008523890.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_007981395.1
GO:0008927 - mannonate dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012791.2
COORDINATES: similar to AA sequence:RefSeq:WP_006091034.1
COORDINATES: similar to AA sequence:RefSeq:WP_004594988.1
COORDINATES: similar to AA sequence:RefSeq:WP_007539846.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007273876.1
COORDINATES: similar to AA sequence:RefSeq:WP_008011349.1
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006813 - potassium ion transport [Evidence IEA]
TrkA C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007694039.1
COORDINATES: similar to AA sequence:RefSeq:WP_007741704.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013862.2
GO:0006629 - lipid metabolic process [Evidence IEA]
patatin-like phospholipase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007698662.1
COORDINATES: similar to AA sequence:RefSeq:WP_004975949.1
COORDINATES: similar to AA sequence:RefSeq:WP_007698453.1
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004060613.1
COORDINATES: similar to AA sequence:RefSeq:WP_006667336.1
COORDINATES: similar to AA sequence:RefSeq:WP_006667335.1
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006107005.1
COORDINATES: similar to AA sequence:RefSeq:WP_007694552.1
COORDINATES: similar to AA sequence:RefSeq:WP_004594634.1
COORDINATES: similar to AA sequence:RefSeq:WP_008096799.1
TRAP transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004594638.1
COORDINATES: similar to AA sequence:RefSeq:WP_004971870.1
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004971873.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004594643.1
COORDINATES: similar to AA sequence:RefSeq:WP_014031099.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014863305.1
COORDINATES: similar to AA sequence:RefSeq:WP_007694102.1
COORDINATES: similar to AA sequence:RefSeq:WP_007694101.1
COORDINATES: similar to AA sequence:RefSeq:WP_007740294.1
GO:0009326 - formate dehydrogenase complex [Evidence IEA]
GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007694099.1
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007694098.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
NADH-ubiquinone oxidoreductase-F iron-sulfur binding region domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008424604.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009366575.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
GO:0009060 - aerobic respiration [Evidence IEA]
cbb3-type cytochrome c oxidase subunit I
COORDINATES: similar to AA sequence:RefSeq:WP_006076058.1
COORDINATES: similar to AA sequence:RefSeq:WP_007741271.1
COORDINATES: similar to AA sequence:RefSeq:WP_006079029.1
formate/nitrite transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006077490.1
COORDINATES: similar to AA sequence:RefSeq:WP_008895843.1
COORDINATES: similar to AA sequence:RefSeq:WP_008894004.1
GO:0046873 - metal ion transmembrane transporter activity [Evidence IEA]
GO:0030001 - metal ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF039195.1
COORDINATES: similar to AA sequence:RefSeq:WP_006885920.1
family 78 glycoside hydrolase catalytic domain
COORDINATES: similar to AA sequence:RefSeq:WP_015790124.1
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008417253.1
COORDINATES: protein motif:HMM:NF025054.2
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024853.2
COORDINATES: similar to AA sequence:RefSeq:WP_006667265.1
COORDINATES: similar to AA sequence:RefSeq:WP_007189002.1
COORDINATES: protein motif:HMM:NF024850.2
amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007978538.1
GO:0070967 - coenzyme F420 binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
TIGR03618 family F420-dependent PPOX class oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_014435119.1
GO:0004601 - peroxidase activity [Evidence IEA]; GO:0051920 - peroxiredoxin activity [Evidence IEA]
GO:0006972 - hyperosmotic response [Evidence IEA]; GO:0033194 - response to hydroperoxide [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008896058.1
COORDINATES: similar to AA sequence:RefSeq:WP_009378113.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011571298.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - DNA transposition [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_076611936.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007275396.1
COORDINATES: similar to AA sequence:RefSeq:WP_004967581.1
winged helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF024629.2
COORDINATES: protein motif:HMM:NF015651.2
lysylphosphatidylglycerol synthase transmembrane domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006077807.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007107757.1
COORDINATES: similar to AA sequence:RefSeq:WP_013440732.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008009986.1
COORDINATES: protein motif:HMM:TIGR04154.1
GO:0004576 - oligosaccharyl transferase activity [Evidence IEA]
GO:0006487 - protein N-linked glycosylation [Evidence IEA]
oligosaccharyl transferase, archaeosortase A system-associated
COORDINATES: protein motif:HMM:NF015962.2
GO:0050532 - 2-phosphosulfolactate phosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014041173.1
COORDINATES: similar to AA sequence:RefSeq:WP_004060558.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: similar to AA sequence:RefSeq:WP_006108700.1
TIGR04024 family LLM class F420-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF013752.2
COORDINATES: similar to AA sequence:RefSeq:WP_006827446.1
COORDINATES: similar to AA sequence:RefSeq:WP_015790707.1
COORDINATES: similar to AA sequence:RefSeq:WP_006827444.1
COORDINATES: similar to AA sequence:RefSeq:WP_006667416.1
COORDINATES: similar to AA sequence:RefSeq:WP_008414057.1
COORDINATES: protein motif:HMM:NF037660.2
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF017773.2
COORDINATES: similar to AA sequence:RefSeq:WP_006882398.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012869.2
COORDINATES: similar to AA sequence:RefSeq:WP_006054537.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007983186.1
COORDINATES: similar to AA sequence:RefSeq:WP_012943940.1
GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
COORDINATES: protein motif:HMM:NF012296.2
COORDINATES: protein motif:HMM:NF013757.2
COORDINATES: similar to AA sequence:RefSeq:WP_008894290.1
COORDINATES: similar to AA sequence:RefSeq:WP_012945426.1
COORDINATES: similar to AA sequence:RefSeq:WP_012945527.1
COORDINATES: similar to AA sequence:RefSeq:WP_004515784.1
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006110925.1
COORDINATES: similar to AA sequence:RefSeq:WP_008368204.1
COORDINATES: similar to AA sequence:RefSeq:WP_006179631.1
COORDINATES: similar to AA sequence:RefSeq:WP_006827880.1
COORDINATES: similar to AA sequence:RefSeq:WP_008311938.1
COORDINATES: similar to AA sequence:RefSeq:WP_011222518.1
alcohol dehydrogenase catalytic domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004975926.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
sugar ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_009367769.1
COORDINATES: similar to AA sequence:RefSeq:WP_014031134.1
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007190032.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014031132.1
class II aldolase/adducin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009367681.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019200 - carbohydrate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007190029.1
COORDINATES: similar to AA sequence:RefSeq:WP_004594722.1
GO:0008869 - galactonate dehydratase activity [Evidence IEA]
GO:0009063 - amino acid catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007979067.1
COORDINATES: similar to AA sequence:RefSeq:WP_012945076.1
COORDINATES: similar to AA sequence:RefSeq:WP_008444840.1
COORDINATES: protein motif:HMM:NF016831.2
COORDINATES: protein motif:HMM:NF013582.2
COORDINATES: similar to AA sequence:RefSeq:WP_006666898.1
COORDINATES: protein motif:HMM:NF016906.2
COORDINATES: similar to AA sequence:RefSeq:WP_008014816.1
COORDINATES: similar to AA sequence:RefSeq:WP_008006450.1
COORDINATES: similar to AA sequence:RefSeq:WP_006076693.1
GO:0035673 - oligopeptide transmembrane transporter activity [Evidence IEA]
GO:0006857 - oligopeptide transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005043809.1
COORDINATES: similar to AA sequence:RefSeq:WP_005553612.1
COORDINATES: similar to AA sequence:RefSeq:WP_006091262.1
3-keto-5-aminohexanoate cleavage protein
COORDINATES: similar to AA sequence:RefSeq:WP_008425975.1
COORDINATES: similar to AA sequence:RefSeq:WP_005575631.1
COORDINATES: similar to AA sequence:RefSeq:WP_007979689.1
COORDINATES: protein motif:HMM:NF024091.2
COORDINATES: similar to AA sequence:RefSeq:WP_009377927.1
COORDINATES: protein motif:HMM:NF015630.2
COORDINATES: similar to AA sequence:RefSeq:WP_006091324.1
COORDINATES: similar to AA sequence:RefSeq:WP_006667182.1
GO:0016787 - hydrolase activity [Evidence IEA]
GO:0009166 - nucleotide catabolic process [Evidence IEA]
5'-nucleotidase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF024873.2
ribonuclease H-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006065875.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009761146.1
COORDINATES: similar to AA sequence:RefSeq:WP_004055364.1
COORDINATES: similar to AA sequence:RefSeq:WP_008605986.1
GO:0019628 - urate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005557711.1
GO:0004846 - urate oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006076376.1
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: similar to AA sequence:RefSeq:WP_018259408.1
GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005044989.1
COORDINATES: similar to AA sequence:RefSeq:WP_007741735.1
GO:0015205 - nucleobase transmembrane transporter activity [Evidence IEA]
nucleobase:cation symporter-2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006824144.1
GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
isocitrate/isopropylmalate family dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_006667079.1
GO:0019752 - carboxylic acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007187735.1
COORDINATES: similar to AA sequence:RefSeq:WP_006076367.1
COORDINATES: similar to AA sequence:RefSeq:WP_004055326.1
COORDINATES: similar to AA sequence:RefSeq:WP_011223819.1
GO:0004471 - malate dehydrogenase (decarboxylating) (NAD+) activity [Evidence IEA]; GO:0004470 - malic enzyme activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006165948.1
thiamine pyrophosphate-requiring protein
COORDINATES: similar to AA sequence:RefSeq:WP_006433020.1
COORDINATES: similar to AA sequence:RefSeq:WP_007107530.1
COORDINATES: similar to AA sequence:RefSeq:WP_005043143.1
COORDINATES: similar to AA sequence:RefSeq:WP_004055367.1
COORDINATES: similar to AA sequence:RefSeq:WP_011323921.1
GO:0004474 - malate synthase activity [Evidence IEA]
GO:0006097 - glyoxylate cycle [Evidence IEA]; GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006053378.1
COORDINATES: protein motif:HMM:NF019500.2
COORDINATES: similar to AA sequence:RefSeq:WP_006647863.1
COORDINATES: similar to AA sequence:RefSeq:WP_007981319.1
GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006169199.1
GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011323011.1
GO:0008253 - 5'-nucleotidase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
bifunctional metallophosphatase/5'-nucleotidase
COORDINATES: similar to AA sequence:RefSeq:WP_008451808.1
COORDINATES: similar to AA sequence:RefSeq:WP_006183560.1
COORDINATES: protein motif:HMM:NF012774.2
COORDINATES: similar to AA sequence:RefSeq:WP_008418290.1
COORDINATES: similar to AA sequence:RefSeq:WP_007742915.1
cell surface glycoprotein related protein
COORDINATES: similar to AA sequence:RefSeq:WP_004054567.1
COORDINATES: similar to AA sequence:RefSeq:WP_009377871.1
COORDINATES: similar to AA sequence:RefSeq:WP_005537397.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011224072.1
COORDINATES: similar to AA sequence:RefSeq:WP_008094615.1
COORDINATES: protein motif:HMM:NF037970.1
COORDINATES: similar to AA sequence:RefSeq:WP_006183483.1
GO:0046872 - metal ion binding [Evidence IEA]
heavy metal-associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006106803.1
cobalamin-independent methionine synthase II family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007258797.1
COORDINATES: similar to AA sequence:RefSeq:WP_005559476.1
GO:0004096 - catalase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008524445.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012944580.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009377626.1
COORDINATES: protein motif:HMM:TIGR00813.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0015370 - solute:sodium symporter activity [Evidence IEA]
Members of the Solute:Sodium Symporter (SSS), TC 2.A.21 as described in tcdb.org, catalyze solute:Na+ symport. Known solutes for members of the family include sugars, amino acids, nucleosides, inositols, vitamins, urea or anions, depending on the system.; Members of the Solute:Sodium Symporter (SSS), TC 2.A.21 as described in tcdb.org, catalyze solute:Na+ symport. Known solutes for members of the family include sugars, amino acids, nucleosides, inositols, vitamins, urea or anions, depending on the system.; Members of the Solute:Sodium Symporter (SSS), TC 2.A.21 as described in tcdb.org, catalyze solute:Na+ symport. Known solutes for members of the family include sugars, amino acids, nucleosides, inositols, vitamins, urea or anions, depending on the system; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006430735.1
pantetheine-phosphate adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006630553.1
COORDINATES: similar to AA sequence:RefSeq:WP_005559549.1
COORDINATES: similar to AA sequence:RefSeq:WP_005046810.1
COORDINATES: protein motif:HMM:NF018096.2
COORDINATES: similar to AA sequence:RefSeq:WP_007690142.1
GO:0016624 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009761090.1
alpha-ketoacid dehydrogenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_008388487.1
GO:0006096 - glycolytic process [Evidence IEA]
dihydrolipoamide acetyltransferase family protein
COORDINATES: protein motif:HMM:NF016497.2
COORDINATES: similar to AA sequence:RefSeq:WP_006106879.1
COORDINATES: similar to AA sequence:RefSeq:WP_008323136.1
COORDINATES: similar to AA sequence:RefSeq:WP_008895725.1
COORDINATES: similar to AA sequence:RefSeq:WP_006827395.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: similar to AA sequence:RefSeq:WP_013881479.1
COORDINATES: similar to AA sequence:RefSeq:WP_006827393.1
COORDINATES: similar to AA sequence:RefSeq:WP_013881481.1
COORDINATES: similar to AA sequence:RefSeq:WP_013881482.1
COORDINATES: similar to AA sequence:RefSeq:WP_006827390.1
GO:0046556 - alpha-L-arabinofuranosidase activity [Evidence IEA]
GO:0046373 - L-arabinose metabolic process [Evidence IEA]
alpha-L-arabinofuranosidase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004967074.1
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006666932.1
COORDINATES: similar to AA sequence:RefSeq:WP_008893251.1
TetR family transcriptional regulator C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013875964.1
COORDINATES: similar to AA sequence:RefSeq:WP_020222504.1
COORDINATES: similar to AA sequence:RefSeq:WP_008413912.1
COORDINATES: similar to AA sequence:RefSeq:WP_012943563.1
COORDINATES: similar to AA sequence:RefSeq:WP_004051382.1
GO:0031412 - gas vesicle organization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006076709.1
GO:0033172 - gas vesicle shell [Evidence IEA]; GO:0012506 - vesicle membrane [Evidence IEA]
There are 14 genes on the gvp gene cluster in halophilic archaea. The product of gvpA is a structural component of gas vesicles, which provide buoyancy to cells and promote flotation. It has been reported that the products of gvpAO and gvpFGJKLM represent the minimal set required for gas vesicle formation in halophilic archaea.; There are 14 genes on the gvp gene cluster in halophilic archaea. The product of gvpA is a structural component of gas vesicles, which provide buoyancy to cells and promote flotation. It has been reported that the products of gvpAO and gvpFGJKLM represent the minimal set required for gas vesicle formation in halophilic archaea; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005043851.1
COORDINATES: similar to AA sequence:RefSeq:WP_005043852.1
COORDINATES: protein motif:HMM:NF017287.2
COORDINATES: similar to AA sequence:RefSeq:WP_008012784.1
COORDINATES: similar to AA sequence:RefSeq:WP_005580859.1
COORDINATES: similar to AA sequence:RefSeq:WP_006076717.1
COORDINATES: similar to AA sequence:RefSeq:WP_006076718.1
GO:0012506 - vesicle membrane [Evidence IEA]
GO:0005198 - structural molecule activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004969240.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055654.1
COORDINATES: similar to AA sequence:RefSeq:WP_005045028.1
COORDINATES: similar to AA sequence:RefSeq:WP_012941264.1
COORDINATES: similar to AA sequence:RefSeq:WP_007693875.1
COORDINATES: similar to AA sequence:RefSeq:WP_006667281.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_007981446.1
COORDINATES: similar to AA sequence:RefSeq:WP_004051752.1
COORDINATES: similar to AA sequence:RefSeq:WP_008413797.1
COORDINATES: similar to AA sequence:RefSeq:WP_006078363.1
COORDINATES: similar to AA sequence:RefSeq:WP_004051632.1
COORDINATES: similar to AA sequence:RefSeq:WP_006092588.1
COORDINATES: similar to AA sequence:RefSeq:WP_009760875.1
COORDINATES: similar to AA sequence:RefSeq:WP_004058387.1
energy-coupling factor transporter transmembrane component T
COORDINATES: similar to AA sequence:RefSeq:WP_008322687.1
COORDINATES: similar to AA sequence:RefSeq:WP_007275513.1