Halocatena salina strain AD-1 plasmid unnamed1, complete sequence.
Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Halobacteriales; Haloarculaceae; Halocatena.
Halocatena sp. nov., isolated from a salt lake
Submitted (18-APR-2022) School of Food and Biological Engineering, Jiangsu University, 301 Xuefu Road, Zhenjiang, Jiangsu 212013, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP096020.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 4\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 477.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 07/30/2023 12:09:13\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,895\nCDSs (total) :: 3,844\nGenes (coding) :: 3,747\nCDSs (with protein) :: 3,747\nGenes (RNA) :: 51\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 46\nncRNAs :: 2\nPseudo Genes (total) :: 97\nCDSs (without protein) :: 97\nPseudo Genes (ambiguous residues) :: 0 of 97\nPseudo Genes (frameshifted) :: 49 of 97\nPseudo Genes (incomplete) :: 70 of 97\nPseudo Genes (internal stop) :: 27 of 97\nPseudo Genes (multiple problems) :: 39 of 97\nCRISPR Arrays :: 10\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: protein motif:HMM:NF025001.2
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_014052712.1
COORDINATES: similar to AA sequence:RefSeq:WP_007976907.1
COORDINATES: similar to AA sequence:RefSeq:WP_008418989.1
DNA-directed DNA polymerase II small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007690846.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006667439.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0071586 - CAAX-box protein processing [Evidence IEA]
type II CAAX endopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009762311.1
GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009487771.1
COORDINATES: protein motif:HMM:NF016214.2
COORDINATES: similar to AA sequence:RefSeq:WP_004060620.1
COORDINATES: similar to AA sequence:RefSeq:WP_009366990.1
COORDINATES: similar to AA sequence:RefSeq:WP_006647812.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005045213.1
GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005578658.1
COORDINATES: similar to AA sequence:RefSeq:WP_008446347.1
orc1/cdc6 family replication initiation protein
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: similar to AA sequence:RefSeq:WP_006076556.1
COORDINATES: similar to AA sequence:RefSeq:WP_008389837.1
COORDINATES: similar to AA sequence:RefSeq:WP_004964766.1
COORDINATES: similar to AA sequence:RefSeq:WP_013875879.1
COORDINATES: similar to AA sequence:RefSeq:WP_006187372.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015763191.1
COORDINATES: similar to AA sequence:RefSeq:WP_006066599.1
COORDINATES: similar to AA sequence:RefSeq:WP_006089170.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006089171.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015319874.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004958323.1
COORDINATES: similar to AA sequence:RefSeq:WP_008416593.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_020221352.1
COORDINATES: similar to AA sequence:RefSeq:WP_006666261.1
COORDINATES: protein motif:HMM:NF024118.2
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007738307.1
ParB N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012944514.1
COORDINATES: similar to AA sequence:RefSeq:WP_014053440.1
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004054293.1
GO:0015499 - formate transmembrane transporter activity [Evidence IEA]
GO:0015724 - formate transport [Evidence IEA]
formate/nitrite transporter family protein
COORDINATES: protein motif:HMM:NF018933.2
COORDINATES: similar to AA sequence:RefSeq:WP_006184652.1
GO:0008452 - RNA ligase activity [Evidence IEA]
GO:0016070 - RNA metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006056032.1
COORDINATES: similar to AA sequence:RefSeq:WP_004052080.1
COORDINATES: protein motif:HMM:NF013245.2
COORDINATES: similar to AA sequence:RefSeq:WP_010902299.1
COORDINATES: similar to AA sequence:RefSeq:WP_007983080.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006883316.1
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004976052.1
COORDINATES: similar to AA sequence:RefSeq:WP_008006331.1
COORDINATES: similar to AA sequence:RefSeq:WP_007983093.1
COORDINATES: similar to AA sequence:RefSeq:WP_006667475.1
COORDINATES: similar to AA sequence:RefSeq:WP_006076131.1
COORDINATES: similar to AA sequence:RefSeq:WP_006667471.1
COORDINATES: similar to AA sequence:RefSeq:WP_007983083.1
GO:0016853 - isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007694532.1
COORDINATES: similar to AA sequence:RefSeq:WP_015790119.1
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0071704 - organic substance metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008523917.1
COORDINATES: similar to AA sequence:RefSeq:WP_015790121.1
twin-arginine translocation signal domain-containing protein
COORDINATES: protein motif:HMM:NF012377.2
COORDINATES: similar to AA sequence:RefSeq:WP_015790125.1
COORDINATES: similar to AA sequence:RefSeq:WP_015790124.1
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004958072.1
COORDINATES: protein motif:HMM:NF023149.2
GO:0030246 - carbohydrate binding [Evidence IEA]
malectin domain-containing carbohydrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012943140.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013998.2
COORDINATES: similar to AA sequence:RefSeq:WP_006056077.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004970398.1
TrmB family transcriptional regulator sugar-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012943322.1
COORDINATES: similar to AA sequence:RefSeq:WP_006066936.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
FAD-binding and (Fe-S)-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007979903.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0042834 - peptidoglycan binding [Evidence IEA]
peptidoglycan recognition family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006092079.1
TIGR04024 family LLM class F420-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_005536883.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008423700.1
CaiB/BaiF CoA-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006066743.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007979014.1
COORDINATES: similar to AA sequence:RefSeq:WP_007694024.1
COORDINATES: similar to AA sequence:RefSeq:WP_007694021.1
right-handed parallel beta-helix repeat-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006431291.1
COORDINATES: similar to AA sequence:RefSeq:WP_007737758.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007694019.1
COORDINATES: protein motif:HMM:NF024871.2
COORDINATES: similar to AA sequence:RefSeq:WP_007737761.1
GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007694016.1
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007694015.1
COORDINATES: similar to AA sequence:RefSeq:WP_007694022.1
polysaccharide biosynthesis C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008417996.1
COORDINATES: similar to AA sequence:RefSeq:WP_007694902.1
COORDINATES: similar to AA sequence:RefSeq:WP_015300237.1
COORDINATES: similar to AA sequence:RefSeq:WP_007694772.1
COORDINATES: similar to AA sequence:RefSeq:WP_015321318.1
GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005559723.1
COORDINATES: protein motif:HMM:NF012791.2
GO:0032559 - adenyl ribonucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006665266.1
COORDINATES: similar to AA sequence:RefSeq:WP_008456348.1
COORDINATES: protein motif:HMM:NF013927.2
GO:0016811 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005041577.1
GO:0050043 - lactate racemase activity [Evidence IEA]
lactate racemase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004216596.1
COORDINATES: similar to AA sequence:RefSeq:WP_011142980.1
quaternary ammonium compound efflux SMR transporter SugE
COORDINATES: similar to AA sequence:RefSeq:WP_006883898.1
GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006089955.1
COORDINATES: similar to AA sequence:RefSeq:WP_007976326.1
COORDINATES: similar to AA sequence:RefSeq:WP_008321236.1
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007542102.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007690513.1
GO:0008927 - mannonate dehydratase activity [Evidence IEA]
GO:0006064 - glucuronate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007690507.1
COORDINATES: similar to AA sequence:RefSeq:WP_007690504.1
COORDINATES: similar to AA sequence:RefSeq:WP_006667841.1
GO:0009436 - glyoxylate catabolic process [Evidence IEA]; GO:0071704 - organic substance metabolic process [Evidence IEA]
dihydrodipicolinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008006250.1
COORDINATES: protein motif:HMM:NF013757.2
COORDINATES: protein motif:HMM:NF020897.2
COORDINATES: similar to AA sequence:RefSeq:WP_008526935.1
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: similar to AA sequence:RefSeq:WP_007738052.1
COORDINATES: similar to AA sequence:RefSeq:WP_006078421.1
GO:0018784 - (S)-2-haloacid dehalogenase activity [Evidence IEA]
GO:0006805 - xenobiotic metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004061954.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007691730.1
COORDINATES: similar to AA sequence:RefSeq:WP_008458514.1
COORDINATES: similar to AA sequence:RefSeq:WP_005044855.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007188653.1
GO:0004518 - nuclease activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0009650 - UV protection [Evidence IEA]
COORDINATES: protein motif:HMM:NF016831.2
COORDINATES: protein motif:HMM:NF024953.2
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: similar to AA sequence:RefSeq:WP_008456307.1
COORDINATES: similar to AA sequence:RefSeq:WP_010902144.1
COORDINATES: similar to AA sequence:RefSeq:WP_006433224.1
COORDINATES: similar to AA sequence:RefSeq:WP_006824108.1
tripartite tricarboxylate transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004977692.1
FAD-dependent tricarballylate dehydrogenase TcuA
COORDINATES: similar to AA sequence:RefSeq:WP_007983395.1
tripartite tricarboxylate transporter TctB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006433229.1
tripartite tricarboxylate transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_007983399.1
COORDINATES: protein motif:HMM:NF012655.2
TetR/AcrR family transcriptional regulator
COORDINATES: protein motif:HMM:NF013491.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]
PEP/pyruvate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012609.2
GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006107318.1
GO:0004020 - adenylylsulfate kinase activity [Evidence IEA]
GO:0006790 - sulfur compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006107317.1
COORDINATES: similar to AA sequence:RefSeq:WP_007690451.1
COORDINATES: similar to AA sequence:RefSeq:WP_005041444.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007694002.1
COORDINATES: protein motif:HMM:NF024853.2
COORDINATES: similar to AA sequence:RefSeq:WP_015790423.1
COORDINATES: similar to AA sequence:RefSeq:WP_007188456.1
GO:0016787 - hydrolase activity [Evidence IEA]
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006882014.1
GO:0016151 - nickel cation binding [Evidence IEA]; GO:0009039 - urease activity [Evidence IEA]
GO:0043419 - urea catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011572798.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016530 - metallochaperone activity [Evidence IEA]
GO:0019627 - urea metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013899.2
COORDINATES: similar to AA sequence:RefSeq:WP_006627857.1
COORDINATES: protein motif:HMM:NF012447.2
COORDINATES: similar to AA sequence:RefSeq:WP_014041650.1
COORDINATES: similar to AA sequence:RefSeq:WP_004059343.1
COORDINATES: protein motif:HMM:NF010587.0
GO:0008795 - NAD+ synthase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013752.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - DNA transposition [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006180168.1
COORDINATES: protein motif:HMM:NF012242.2
GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]; GO:0051087 - protein-folding chaperone binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008094346.1
ribbon-helix-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004040798.1
COORDINATES: similar to AA sequence:RefSeq:WP_011572758.1
COORDINATES: similar to AA sequence:RefSeq:WP_006186987.1
COORDINATES: similar to AA sequence:RefSeq:WP_014732685.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_004056155.1
COORDINATES: similar to AA sequence:RefSeq:WP_008096053.1
COORDINATES: similar to AA sequence:RefSeq:WP_006185678.1
COORDINATES: similar to AA sequence:RefSeq:WP_007979270.1
COORDINATES: similar to AA sequence:RefSeq:WP_007979272.1
COORDINATES: similar to AA sequence:RefSeq:WP_007979274.1
COORDINATES: similar to AA sequence:RefSeq:WP_007979276.1
CPBP family intramembrane metalloprotease
COORDINATES: similar to AA sequence:RefSeq:WP_004268146.1
COORDINATES: similar to AA sequence:RefSeq:WP_006108719.1
COORDINATES: similar to AA sequence:RefSeq:WP_015319396.1
GO:0006817 - phosphate ion transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015319397.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015319398.1
COORDINATES: similar to AA sequence:RefSeq:WP_009488261.1
COORDINATES: similar to AA sequence:RefSeq:WP_006106691.1
COORDINATES: protein motif:HMM:NF015448.2
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
phenylalanine--tRNA ligase beta subunit-related protein
COORDINATES: protein motif:HMM:NF013700.2
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007979587.1
lytic transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004055876.1
COORDINATES: similar to AA sequence:RefSeq:WP_012941368.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF036966.2
COORDINATES: similar to AA sequence:RefSeq:WP_007997868.1
COORDINATES: similar to AA sequence:RefSeq:WP_005045165.1
GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006076620.1
GO:0004096 - catalase activity [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005043755.1
COORDINATES: protein motif:HMM:NF024091.2
COORDINATES: similar to AA sequence:RefSeq:WP_006092830.1
COORDINATES: similar to AA sequence:RefSeq:WP_014555899.1
COORDINATES: similar to AA sequence:RefSeq:WP_006065896.1
COORDINATES: similar to AA sequence:RefSeq:WP_006886089.1
COORDINATES: similar to AA sequence:RefSeq:WP_007190718.1
COORDINATES: similar to AA sequence:RefSeq:WP_008308302.1
BREX-5 system adenine-specific DNA-methyltransferase PglX
COORDINATES: similar to AA sequence:RefSeq:WP_006182472.1
COORDINATES: similar to AA sequence:RefSeq:WP_018258687.1
COORDINATES: similar to AA sequence:RefSeq:WP_006182470.1
COORDINATES: similar to AA sequence:RefSeq:WP_014053207.1
COORDINATES: similar to AA sequence:RefSeq:WP_007743171.1
COORDINATES: protein motif:HMM:NF024430.2
COORDINATES: similar to AA sequence:RefSeq:WP_015322892.1
COORDINATES: protein motif:HMM:NF014250.2
COORDINATES: protein motif:HMM:NF022430.2
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: protein motif:HMM:NF013625.2
GO:0042834 - peptidoglycan binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013199690.1
COORDINATES: similar to AA sequence:RefSeq:WP_007999365.1
COORDINATES: similar to AA sequence:RefSeq:WP_008319950.1
COORDINATES: similar to AA sequence:RefSeq:WP_006077804.1
COORDINATES: similar to AA sequence:RefSeq:WP_008014314.1
GO:0008490 - arsenite secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008893658.1
low molecular weight phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007141888.1
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006813 - potassium ion transport [Evidence IEA]
TrkA C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007981140.1
winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014865751.1
COORDINATES: similar to AA sequence:RefSeq:WP_012942837.1
COORDINATES: similar to AA sequence:RefSeq:WP_020221398.1
GO:0071705 - nitrogen compound transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004958646.1
GO:0008929 - methylglyoxal synthase activity [Evidence IEA]
GO:0019242 - methylglyoxal biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012945702.1
COORDINATES: similar to AA sequence:RefSeq:WP_015322336.1
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: similar to AA sequence:RefSeq:WP_006882235.1
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013881259.1
COORDINATES: similar to AA sequence:RefSeq:WP_013881261.1
COORDINATES: similar to AA sequence:RefSeq:WP_015789852.1
COORDINATES: similar to AA sequence:RefSeq:WP_007694559.1
COORDINATES: similar to AA sequence:RefSeq:WP_010612631.1
COORDINATES: similar to AA sequence:RefSeq:WP_013881271.1
COORDINATES: similar to AA sequence:RefSeq:WP_006884287.1
COORDINATES: similar to AA sequence:RefSeq:WP_005536787.1
COORDINATES: similar to AA sequence:RefSeq:WP_011687921.1
COORDINATES: similar to AA sequence:RefSeq:WP_005038673.1
rhodanese-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004053397.1
COORDINATES: similar to AA sequence:RefSeq:WP_007741699.1
COORDINATES: similar to AA sequence:RefSeq:WP_006179421.1
GO:0070069 - cytochrome complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0019646 - aerobic electron transport chain [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006187451.1
GO:0016682 - oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor [Evidence IEA]
cytochrome d ubiquinol oxidase subunit II
COORDINATES: similar to AA sequence:RefSeq:WP_010612035.1
pyrimidine dimer DNA glycosylase/endonuclease V
COORDINATES: similar to AA sequence:RefSeq:WP_015321234.1
COORDINATES: similar to AA sequence:RefSeq:WP_007188248.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0015446 - ATPase-coupled arsenite transmembrane transporter activity [Evidence IEA]
GO:0071722 - detoxification of arsenic-containing substance [Evidence IEA]
TRC40/GET3/ArsA family transport-energizing ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_011324085.1
GO:0016166 - phytoene dehydrogenase activity [Evidence IEA]
GO:0016117 - carotenoid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005042835.1
COORDINATES: similar to AA sequence:RefSeq:WP_008523932.1
GO:0016836 - hydro-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005042840.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004659 - prenyltransferase activity [Evidence IEA]
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
phytoene/squalene synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004048321.1
COORDINATES: similar to AA sequence:RefSeq:WP_007980965.1
COORDINATES: similar to AA sequence:RefSeq:WP_013875825.1
COORDINATES: similar to AA sequence:RefSeq:WP_006054636.1
COORDINATES: similar to AA sequence:RefSeq:WP_006825674.1
COORDINATES: similar to AA sequence:RefSeq:WP_008012594.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006067474.1
COORDINATES: similar to AA sequence:RefSeq:WP_008441671.1
COORDINATES: similar to AA sequence:RefSeq:WP_007982936.1
COORDINATES: similar to AA sequence:RefSeq:WP_006088386.1
COORDINATES: similar to AA sequence:RefSeq:WP_007694267.1
DNA-directed RNA polymerase subunit epsilon
COORDINATES: similar to AA sequence:RefSeq:WP_012944642.1
GO:0004169 - dolichyl-phosphate-mannose-protein mannosyltransferase activity [Evidence IEA]
GO:0035269 - protein O-linked mannosylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF015515.2
COORDINATES: similar to AA sequence:RefSeq:WP_004217181.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
PLP-dependent cysteine synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007260885.1
COORDINATES: similar to AA sequence:RefSeq:WP_006667111.1
COORDINATES: similar to AA sequence:RefSeq:WP_007979022.1
COORDINATES: similar to AA sequence:RefSeq:WP_008415782.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014041575.1
glycoside hydrolase family 97 catalytic domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010903105.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004797 - thymidine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008414107.1
glycoside hydrolase family 2 TIM barrel-domain containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013875689.1
COORDINATES: similar to AA sequence:RefSeq:WP_013875688.1
COORDINATES: similar to AA sequence:RefSeq:WP_013875687.1
COORDINATES: similar to AA sequence:RefSeq:WP_006106788.1
COORDINATES: similar to AA sequence:RefSeq:WP_006430157.1
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008006220.1
COORDINATES: similar to AA sequence:RefSeq:WP_008413666.1
COORDINATES: similar to AA sequence:RefSeq:WP_020220602.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024573.2
COORDINATES: similar to AA sequence:RefSeq:WP_007694938.1
DNA double-strand break repair nuclease NurA
COORDINATES: similar to AA sequence:RefSeq:WP_008326442.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006088470.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007142422.1
COORDINATES: similar to AA sequence:RefSeq:WP_008459325.1
COORDINATES: similar to AA sequence:RefSeq:WP_006432325.1
MaoC family dehydratase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012943493.1
COORDINATES: similar to AA sequence:RefSeq:WP_012943494.1
COORDINATES: similar to AA sequence:RefSeq:WP_006432331.1
COORDINATES: similar to AA sequence:RefSeq:WP_006182791.1
COORDINATES: similar to AA sequence:RefSeq:WP_006182790.1
COORDINATES: similar to AA sequence:RefSeq:WP_006182789.1
COORDINATES: similar to AA sequence:RefSeq:WP_006827595.1
COORDINATES: similar to AA sequence:RefSeq:WP_006649864.1
3-hydroxyacyl-CoA dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006088488.1
enoyl-CoA hydratase/isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012943826.1
COORDINATES: similar to AA sequence:RefSeq:WP_015319901.1
N-acyl homoserine lactonase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008308127.1
COORDINATES: similar to AA sequence:RefSeq:WP_015299089.1
COORDINATES: similar to AA sequence:RefSeq:WP_006654802.1
COORDINATES: similar to AA sequence:RefSeq:WP_005041884.1
COORDINATES: similar to AA sequence:RefSeq:WP_008895687.1
COORDINATES: similar to AA sequence:RefSeq:WP_012945802.1
COORDINATES: similar to AA sequence:RefSeq:WP_008895688.1
COORDINATES: similar to AA sequence:RefSeq:WP_008892473.1
COORDINATES: similar to AA sequence:RefSeq:WP_008892457.1
alcohol dehydrogenase catalytic domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009367573.1
COORDINATES: similar to AA sequence:RefSeq:WP_012944999.1
COORDINATES: similar to AA sequence:RefSeq:WP_008388586.1
family 78 glycoside hydrolase catalytic domain
COORDINATES: similar to AA sequence:RefSeq:WP_007997764.1
COORDINATES: protein motif:HMM:NF025934.2
GO:0047487 - oligogalacturonide lyase activity [Evidence IEA]
GO:0045490 - pectin catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004968543.1
COORDINATES: protein motif:HMM:NF012706.2
COORDINATES: similar to AA sequence:RefSeq:WP_008388598.1
COORDINATES: similar to AA sequence:RefSeq:WP_006599994.1
COORDINATES: similar to AA sequence:RefSeq:WP_008388602.1
COORDINATES: similar to AA sequence:RefSeq:WP_008388603.1
COORDINATES: similar to AA sequence:RefSeq:WP_008895683.1
COORDINATES: similar to AA sequence:RefSeq:WP_006107120.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_008573184.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041059.1
COORDINATES: similar to AA sequence:RefSeq:WP_012945798.1
COORDINATES: similar to AA sequence:RefSeq:WP_008572932.1
COORDINATES: similar to AA sequence:RefSeq:WP_006667821.1
COORDINATES: similar to AA sequence:RefSeq:WP_006825643.1
COORDINATES: similar to AA sequence:RefSeq:WP_008895671.1
COORDINATES: similar to AA sequence:RefSeq:WP_004968403.1
COORDINATES: similar to AA sequence:RefSeq:WP_006825636.1
COORDINATES: similar to AA sequence:RefSeq:WP_006825633.1
COORDINATES: similar to AA sequence:RefSeq:WP_013875723.1
COORDINATES: similar to AA sequence:RefSeq:WP_013875712.1
COORDINATES: similar to AA sequence:RefSeq:WP_013875711.1
COORDINATES: similar to AA sequence:RefSeq:WP_012945507.1
COORDINATES: similar to AA sequence:RefSeq:WP_013875709.1
COORDINATES: similar to AA sequence:RefSeq:WP_006825626.1
COORDINATES: similar to AA sequence:RefSeq:WP_013875705.1
COORDINATES: similar to AA sequence:RefSeq:WP_008097146.1
COORDINATES: protein motif:HMM:NF019607.2
COORDINATES: similar to AA sequence:RefSeq:WP_004594708.1
COORDINATES: similar to AA sequence:RefSeq:WP_007143390.1
COORDINATES: similar to AA sequence:RefSeq:WP_013880274.1
COORDINATES: similar to AA sequence:RefSeq:WP_004594704.1
BMP family ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF013429.2
COORDINATES: similar to AA sequence:RefSeq:WP_006167778.1
GO:0003824 - catalytic activity [Evidence IEA]
sugar phosphate isomerase/epimerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005044767.1
COORDINATES: similar to AA sequence:RefSeq:WP_007743091.1
COORDINATES: similar to AA sequence:RefSeq:WP_004052315.1
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013034991.1
GO:0004512 - inositol-3-phosphate synthase activity [Evidence IEA]
GO:0006021 - inositol biosynthetic process [Evidence IEA]; GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004041321.1
COORDINATES: similar to AA sequence:RefSeq:WP_008013063.1
COORDINATES: similar to AA sequence:RefSeq:WP_013875704.1
COORDINATES: similar to AA sequence:RefSeq:WP_006600063.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041196.1
COORDINATES: protein motif:HMM:NF012686.2
COORDINATES: similar to AA sequence:RefSeq:WP_008326983.1
COORDINATES: similar to AA sequence:RefSeq:WP_008326978.1
GO:0019439 - aromatic compound catabolic process [Evidence IEA]; GO:0006725 - cellular aromatic compound metabolic process [Evidence IEA]
aromatic-ring-hydroxylating dioxygenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_008326971.1
COORDINATES: similar to AA sequence:RefSeq:WP_006165898.1
COORDINATES: similar to AA sequence:RefSeq:WP_006165899.1
COORDINATES: similar to AA sequence:RefSeq:WP_006165900.1
COORDINATES: similar to AA sequence:RefSeq:WP_006165901.1
COORDINATES: similar to AA sequence:RefSeq:WP_008326956.1
COORDINATES: similar to AA sequence:RefSeq:WP_008326988.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: protein motif:HMM:NF020650.2
COORDINATES: similar to AA sequence:RefSeq:WP_020203040.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006107192.1
COORDINATES: similar to AA sequence:RefSeq:WP_005581540.1
COORDINATES: similar to AA sequence:RefSeq:WP_007693686.1
COORDINATES: similar to AA sequence:RefSeq:WP_018859795.1
GO:0008171 - O-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012945017.1
COORDINATES: similar to AA sequence:RefSeq:WP_004044491.1
GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004594920.1
GO:0019239 - deaminase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012318.2
trypsin-like peptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008893322.1
COORDINATES: protein motif:HMM:NF012296.2
GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008096852.1
COORDINATES: protein motif:HMM:NF012451.2
COORDINATES: similar to AA sequence:RefSeq:WP_008893494.1
6-pyruvoyl tetrahydropterin synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008426664.1
COORDINATES: similar to AA sequence:RefSeq:WP_020220674.1
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005042378.1
COORDINATES: similar to AA sequence:RefSeq:WP_006089297.1
GO:0009263 - deoxyribonucleotide biosynthetic process [Evidence IEA]
ribonucleotide-diphosphate reductase subunit beta