Bacillus altitudinis strain GR-8 plasmid pGR8, complete sequence.
Bacillus altitudinis (Bacillus invictae)
Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Bacillus.
Genome sequence of a ginger rhizome rot disease pathogen Bacillus pumilus
Submitted (30-JUL-2014) Key Laboratory of Agricultural and Environmental Microbiology, Wuhan Institute of Virology, Chinese Academy of Sciences, Wuchang Xiaohongshan Zhongqu 44, Wuhan, Hubei 430071, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP009109.1.\nThe organism was changed from 'Bacillus pumilus' to 'Bacillus\naltitudinis' in August 2018.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Taxonomic-Update-Statistics-START##\nThis Genome (query) :: GCA_001191605.1\nCurrent Name :: Bacillus altitudinis\nPrevious Name :: Bacillus pumilus\nDate Updated :: 2018-08-29\nAnalysis Type :: Average Nucleotide Identity (ANI)\nAnalysis 1 (A1) :: Query vs. TYPE genome for current name\nA1 Genome (subject) :: GCA_000691145.1\nA1 Name :: Bacillus altitudinis\nA1 ANI :: 98.4776%\nA1 Query Coverage :: 94.47%\nA1 Subject Coverage :: 94.55%\nAnalysis 2 (A2) :: Query vs. TYPE genome for previous name\nA2 Genome (subject) :: GCA_900186955.1\nA2 Name :: Bacillus pumilus\nA2 ANI :: 88.85876%\nA2 Query Coverage :: 91.27%\nA2 Subject Coverage :: 87.15%\n##Taxonomic-Update-Statistics-END##\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Velvet v. V1.2.07\nReference-guided Assembly :: CP007436.1\nGenome Coverage :: 116x\nSequencing Technology :: Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/11/2023 10:48:41\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,791\nCDSs (total) :: 3,681\nGenes (coding) :: 3,660\nCDSs (with protein) :: 3,660\nGenes (RNA) :: 110\nrRNAs :: 8, 8, 8 (5S, 16S, 23S)\ncomplete rRNAs :: 8, 8, 8 (5S, 16S, 23S)\ntRNAs :: 81\nncRNAs :: 5\nPseudo Genes (total) :: 21\nCDSs (without protein) :: 21\nPseudo Genes (ambiguous residues) :: 0 of 21\nPseudo Genes (frameshifted) :: 8 of 21\nPseudo Genes (incomplete) :: 13 of 21\nPseudo Genes (internal stop) :: 4 of 21\nPseudo Genes (multiple problems) :: 4 of 21\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_003179376.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011255094.1
COORDINATES: similar to AA sequence:RefSeq:WP_017358755.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890180.1
COORDINATES: similar to AA sequence:RefSeq:WP_013354252.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.