Bombilactobacillus folatiphilus strain SG4_D2 plasmid p1unnamed, complete sequence.
Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Bombilactobacillus.
Apilactobacillus apisilvae sp. nov., Nicolia spurrieriana gen. nov. sp. nov., Bombilactobacillus folatiphilus sp. nov. and Bombilactobacillus thymidiniphilus sp. nov., four new lactic acid bacterial isolates from stingless bees Tetragonula carbonaria and Austroplebeia australis
Submitted (11-MAR-2022) Wine Science, The University of Adelaide, PMB 1, Glen Osmond, South Australia 5064, Australia
REFSEQ INFORMATION: The reference sequence is identical to\nCP093367.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: NOV-2020\nAssembly Method :: Smrtlink v. 9.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 7404x\nSequencing Technology :: PacBio Sequel II\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 10/10/2022 08:17:07\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 1,626\nCDSs (total) :: 1,553\nGenes (coding) :: 1,530\nCDSs (with protein) :: 1,530\nGenes (RNA) :: 73\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 58\nncRNAs :: 3\nPseudo Genes (total) :: 23\nCDSs (without protein) :: 23\nPseudo Genes (ambiguous residues) :: 0 of 23\nPseudo Genes (frameshifted) :: 12 of 23\nPseudo Genes (incomplete) :: 9 of 23\nPseudo Genes (internal stop) :: 10 of 23\nPseudo Genes (multiple problems) :: 7 of 23\nCRISPR Arrays :: 3\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
type strain of Bombilactobacillus folatiphilus
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_003712353.1
GO:0005887 - integral component of plasma membrane [Evidence IEA]
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF015347.2
BspA family leucine-rich repeat surface protein
COORDINATES: similar to AA sequence:RefSeq:WP_007746911.1
COORDINATES: protein motif:HMM:NF028039.2
COORDINATES: similar to AA sequence:RefSeq:WP_008856054.1