Anthonomus grandis grandis chromosome 23, icAntGran1.3, whole genome shotgun sequence.
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Curculionidae; Curculioninae; Anthonomini; Anthonomus.
REFSEQ INFORMATION: The reference sequence is identical to\nCM044911.1.\nAssembly name: icAntGran1.3\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the United States Department of\nAgriculture on 2022/08/03. The original whole-genome shotgun\nproject has the accession JAKYJU000000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: United States Department of Agriculture\nAssembly Date :: 31-MAR-2022\nAssembly Method :: HiFiASM v. 0.14.2-r315\nAssembly Name :: icAntGran1.2\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 21x\nSequencing Technology :: PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: Anthonomus grandis grandis\n Annotation Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Lindsey Perkin and Charles Suh, USDA-ARS
uncharacterized LOC126749276; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC126749276, transcript variant X1
COORDINATES: polyA evidence [ECO:0006239]
uncharacterized LOC126749276, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized protein LOC126749276 isoform X2
uncharacterized protein LOC126749276 isoform X1
sporozoite surface protein 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC126749288; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC126749286; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC126749286, transcript variant X8
uncharacterized LOC126749286, transcript variant X5
uncharacterized LOC126749286, transcript variant X4
uncharacterized LOC126749286, transcript variant X3
uncharacterized LOC126749286, transcript variant X7
uncharacterized LOC126749286, transcript variant X2
uncharacterized LOC126749286, transcript variant X1
uncharacterized LOC126749286, transcript variant X6
uncharacterized LOC126749285; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC126749285, transcript variant X2
uncharacterized LOC126749285, transcript variant X3
uncharacterized LOC126749285, transcript variant X1
uncharacterized LOC126749282; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC126749282, transcript variant X10
uncharacterized LOC126749283; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC126749283, transcript variant X2
uncharacterized LOC126749283, transcript variant X3
uncharacterized LOC126749283, transcript variant X1
uncharacterized LOC126749282, transcript variant X21
uncharacterized LOC126749282, transcript variant X19
uncharacterized LOC126749282, transcript variant X17
uncharacterized LOC126749282, transcript variant X8
uncharacterized LOC126749282, transcript variant X20
uncharacterized LOC126749282, transcript variant X18
uncharacterized LOC126749282, transcript variant X12
uncharacterized LOC126749282, transcript variant X14
uncharacterized LOC126749282, transcript variant X3
uncharacterized LOC126749282, transcript variant X4
uncharacterized LOC126749282, transcript variant X2
uncharacterized LOC126749282, transcript variant X5
uncharacterized LOC126749282, transcript variant X15
uncharacterized LOC126749282, transcript variant X16
uncharacterized LOC126749282, transcript variant X13
uncharacterized LOC126749282, transcript variant X11
uncharacterized LOC126749282, transcript variant X7
uncharacterized LOC126749282, transcript variant X6
uncharacterized LOC126749282, transcript variant X9
uncharacterized LOC126749282, transcript variant X1
uncharacterized LOC126749287; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC126749289; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC126749289, transcript variant X2
uncharacterized LOC126749289, transcript variant X1
uncharacterized LOC126749277; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC126749258; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
E3 SUMO-protein ligase ZBED1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
putative nuclease HARBI1; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC126749261; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC126749281; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC126749262; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC126749267; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC126749267, transcript variant X2
uncharacterized LOC126749267, transcript variant X1
uncharacterized LOC126749275; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC126749274; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC126749273; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC126749271; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: putative nuclease HARBI1
uncharacterized LOC126749264; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC126749265; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC126749272; Derived by automated computational analysis using gene prediction method: Gnomon.
transcription factor Adf-1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC126749268; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC126749268, transcript variant X2
uncharacterized LOC126749268, transcript variant X1
uncharacterized LOC126749269; Derived by automated computational analysis using gene prediction method: Gnomon.
30S ribosomal protein S5-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC126749270; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC126749270, transcript variant X1
uncharacterized LOC126749270, transcript variant X2
uncharacterized protein LOC126749270 isoform X1
uncharacterized LOC126749270, transcript variant X3
uncharacterized protein LOC126749270 isoform X2
uncharacterized LOC126749279; Derived by automated computational analysis using gene prediction method: Gnomon.