Prosthecochloris aestuarii DSM 271 plasmid pPAES01, complete sequence.
type: Entry
definition: Prosthecochloris aestuarii DSM 271 plasmid pPAES01, complete sequence.
sequence version: NC_011061.1
sequence date: 2023-04-22
sequence: sequence
division: CON
label: NC_011061.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02598281
keyword: RefSeq
source: Prosthecochloris aestuarii DSM 271
organism: Prosthecochloris aestuarii DSM 271
taxonomy: Bacteria; Chlorobiota; Chlorobiia; Chlorobiales; Chlorobiaceae; Prosthecochloris.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP001109.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 3634472\nSource DNA available from Donald A. Bryant (dab14@psu.edu)\nBacteria available from DSMZ: DSM 271\nContacts: Donald A. Bryant (dab14@psu.edu)\n David Bruce (microbe@cuba.jgi-psf.org)\nAnnotation done by JGI-ORNL and JGI-PGF\nFinishing done by Pennsylvania State University\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. it is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/22/2023 01:01:02\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,400\nCDSs (total) :: 2,348\nGenes (coding) :: 2,316\nCDSs (with protein) :: 2,316\nGenes (RNA) :: 52\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 46\nncRNAs :: 3\nPseudo Genes (total) :: 32\nCDSs (without protein) :: 32\nPseudo Genes (ambiguous residues) :: 0 of 32\nPseudo Genes (frameshifted) :: 12 of 32\nPseudo Genes (incomplete) :: 21 of 32\nPseudo Genes (internal stop) :: 8 of 32\nPseudo Genes (multiple problems) :: 7 of 32\nCRISPR Arrays :: 4\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 66772
topology: circular
so has quality: SO_0000988
location: 1..66772
location: region:1-66772:1
RO_0002162: 290512

NC_011061
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02598281
type: BioSample
SIO_000068: biosample

1
title: Complete sequence of plasmid of Prosthecochloris aestuarii DSM 271
author: Lucas, S.
author: Copeland, A.
author: Lapidus, A.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Bruce, D.
author: Goodwin, L.
author: Pitluck, S.
author: Schmutz, J.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Anderson, I.
author: Liu, Z.
author: Li, T.
author: Zhao, F.
author: Overmann, J.
author: Bryant, D.A.
author: Richardson, P.
journal: Unpublished

2
title: Direct Submission
author: Lucas, S.
author: Copeland, A.
author: Lapidus, A.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Bruce, D.
author: Goodwin, L.
author: Pitluck, S.
author: Schmutz, J.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Anderson, I.
author: Liu, Z.
author: Li, T.
author: Zhao, F.
author: Overmann, J.
author: Bryant, D.A.
author: Richardson, P.
journal: Submitted (25-JUN-2008) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66772:1
position: 66772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-66772:1:source
so part of: sequence
organism: Prosthecochloris aestuarii DSM 271
mol type: genomic DNA
strain: DSM 271
type material: type strain of Prosthecochloris aestuarii
plasmid: pPAES01

290512
type: Taxonomy
SIO_000068: taxonomy

PAES_RS11610
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11610
old locus tag: Paes_2339
so part of: sequence
location: 1..786
location: region:1-786:1
so has part: feature:1-786:1:exon
subclass of: SO_0000010

position:786:1
position: 786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-786:1:exon

PAES_RS11610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11610
old locus tag: Paes_2339
inference: COORDINATES: protein motif:HMM:NF022077.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MSKVIAIANQKGGSGKTTTAVNLGAALAHDKTRNVLVIDMDPQGHTTDHLIEQDPDDLNFTLYNVLRDFDSIGKSIADLVISTDFNVDLWPANIELSGLEAAIANEAGREAHLKAAISRVRSKYDYIIIDVPPQLGLLSLNALMAADKVIVPIQTEYYAYKALKQLFEIIRKIRNKGLNDNLDIMGILLTMYDARLTICKQVVDMARKNFDKKVFKTTIRTSSKLKEAAGSKRPIIYYDSGSKGSEDYIALAKEILQRSNA
SIO_010081: PAES_RS11610
subclass of: SO_0000673
so part of: PAES_RS11610
location: 1..786
location: region:1-786:1
so has part: feature:1-786:1:exon

WP_012509535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-786:1:exon

PAES_RS11615
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11615
old locus tag: Paes_2340
so part of: sequence
location: 840..1253
location: region:840-1253:1
so has part: feature:840-1253:1:exon
subclass of: SO_0000010

position:840:1
position: 840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1253:1
position: 1253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:840-1253:1:exon

PAES_RS11615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11615
old locus tag: Paes_2340
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAVTSRSKAKFRDFMEDSKGGGLDDIIRSTSDDRKNVPDASRQTDRKPAGKTKKSKMELTSQFAIRFYPDQYTFLVGLNRKITNSRKSSIDYERITNSTIIRSFISILKELVIDTTNITSEEVLTERIREALEKHYS
SIO_010081: PAES_RS11615
subclass of: SO_0000673
so part of: PAES_RS11615
location: 840..1253
location: region:840-1253:1
so has part: feature:840-1253:1:exon

WP_012509536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:840-1253:1:exon

PAES_RS11620
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11620
old locus tag: Paes_2341
so part of: sequence
location: 1471..1893
location: region:1471-1893:1
so has part: feature:1471-1893:1:exon
subclass of: SO_0000010

position:1471:1
position: 1471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1893:1
position: 1893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1471-1893:1:exon

PAES_RS11620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11620
old locus tag: Paes_2341
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTFSPMATAIQLRGDDDLTTSIFYGMSDRIRSAALGDVALIQGSETVLYVISGQYRNRAFLFRTGVVKGRDTIPGVYPDVQLLVSARTRTMVHRLQTSVKWLKSKGIDLNTLDDDFYARLQARIEEKKFSIAFIQKLLNR
SIO_010081: PAES_RS11620
subclass of: SO_0000673
so part of: PAES_RS11620
location: 1471..1893
location: region:1471-1893:1
so has part: feature:1471-1893:1:exon

WP_012509537.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1471-1893:1:exon

PAES_RS11625
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
gene: lepB
locus tag: PAES_RS11625
old locus tag: Paes_2342
so part of: sequence
location: 1890..2453
location: region:1890-2453:1
so has part: feature:1890-2453:1:exon
subclass of: SO_0000010

position:1890:1
position: 1890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2453:1
position: 2453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1890-2453:1:exon

PAES_RS11625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
gene: lepB
locus tag: PAES_RS11625
old locus tag: Paes_2342
EC number: 3.4.21.89
inference: COORDINATES: protein motif:HMM:NF021981.2
GO function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal peptidase I
translation: MKGLHTLRPLLFSAGMTLLLVMMAGWYLPGRVIFNYTDSLPHGVYLIRDIRTCEHGDVVVFPVPQHVRKLVQDRGWLNEGDMLMKPVLARSGEECCMRDGLLVINGRTVSRISATDADGRSMPVTEFCGTVPDGMIIVGTAMENSFDSRYFGPVAVSSVTGKAVALLTWESGRQDRQGSHGNEQEAS
SIO_010081: PAES_RS11625
subclass of: SO_0000673
so part of: PAES_RS11625
location: 1890..2453
location: region:1890-2453:1
so has part: feature:1890-2453:1:exon

WP_012509538.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1890-2453:1:exon

PAES_RS11630
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11630
old locus tag: Paes_2343
so part of: sequence
location: 2450..4372
location: region:2450-4372:1
so has part: feature:2450-4372:1:exon
subclass of: SO_0000010

position:2450:1
position: 2450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4372:1
position: 4372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2450-4372:1:exon

PAES_RS11630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11630
old locus tag: Paes_2343
inference: COORDINATES: protein motif:HMM:NF023271.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3363 domain-containing protein
translation: MRNEDDVQFRPRLKGRKRSERVPSISSLSRLVRKARGGHVLRGYRAPHVPSPKSYSRRVTVKMRFVKMNAYGRHAATMHIGYLERDNVEKDGSRGQMYGSDGEFRRDDFIRVIDGEPHQFRIIISPEDAHELDLTTFTRDLMKQVEKDLGRELEWGAVNHYNTDHPHTHAVIRGIDRQGREVMIDREYISNGIRRRAQELATRELGVKSEIEYQQDMIRQISAQKVTSLDWRLEQLEQGGVITSEALQGRAGRLHVDKILFRRLQMLESLGLATSGQYGVWYMQEGWKERLRELGIREERFRTMHDAIGGDPSRYRILGLEHREIEGRLTRIGIDDEYRDRYYYIIETRDGKAYYADAGRHSNEAAYAEHDIVKAEMTVDSRAKKADIAINSIATKNDGIYSKEMHLASIKDDMIRLSNRKLVTKEEFVDAHVMRMHKLVSMGLAEPAERDGEWVVDPDMQQKIRELDAKQPLYMVRVQRKGGSLAHQETYRGRTWLDMYTDDPDAAGAHYGFGKEVREAARRRAVFLQNELQVDPADPARARQLDRIERQGLASEHSQKTGYRYRPAEKLMKLQGTVSDTGSLASGRRYAMITSERSREFTLVPWRKEYTASLGKQAEVSRTVSGGRWMMRQIGKDLGR
SIO_010081: PAES_RS11630
subclass of: SO_0000673
so part of: PAES_RS11630
location: 2450..4372
location: region:2450-4372:1
so has part: feature:2450-4372:1:exon

WP_012509539.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2450-4372:1:exon

PAES_RS11635
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11635
old locus tag: Paes_2344
so part of: sequence
location: 4374..6545
location: region:4374-6545:1
so has part: feature:4374-6545:1:exon
subclass of: SO_0000010

position:4374:1
position: 4374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6545:1
position: 6545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4374-6545:1:exon

PAES_RS11635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11635
old locus tag: Paes_2344
inference: COORDINATES: protein motif:HMM:NF010450.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraG
translation: MKQKRAVHVFYGHVATGLLFMLLGTWAATQYVAFLLGYQPQLGEPLMIIGGYPVYEPWAWMFWSYHFEPYAPHVFEYASRITYASFFAMAGVMVVLSILRAKRQRQAGTYGTARWATEKELDEAGILAEEGIVLAQTRDARYASAVSRHNGEAEVKWVMKKPGAAILRHNGPEHVFCFAPTRSGKGVGLVIPTLLAWKGSCVVYDIKKENWAATAGWRRQFSHCWCFEPTSPHSVRFNPLMEIRQGDNEVRDVQNVADILVDPEGVKDRLDHWEKTGHALLVGAILHVLYAEEDKTLSGVAGFLANPGRSIEETLGMMLSHHHLEGHPHPVVASCAREMLNKSENELSGVLSTAMSFLGLYRDPVIARSTAVSDFRISDLMQGDRPVSLYLVVPPSDIDRTKPLIRLMLNQMGRRLTEKIGFGKKHYRHRLLMMLDEFPSLGRLGFYETELAYMAGYGIKCIMIAQSLNQIEKVYGQNNAILDNSHVRITYGALDERTAKRISDLLGQATEKRQQLNYAGNRLAPWLGHVMQSEQESPRPLLTPGEILQLPGDDALVMIGGLPPYRAKKLMYYQDRRFEGMAWRPAPDTPEEQQKELPEHVAPPAWMDYASERNETRYDTSYIDASGCSCGEGSGPGMSAHDDDESEEHQDLQHDHEQEHVLERMHPEDELYEGIIPEHAEDDEASVPGHQQPADESERRSRRQDRNRTIELSRTPGGGDLPL
SIO_010081: PAES_RS11635
subclass of: SO_0000673
so part of: PAES_RS11635
location: 4374..6545
location: region:4374-6545:1
so has part: feature:4374-6545:1:exon

WP_012509540.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4374-6545:1:exon

PAES_RS11640
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11640
old locus tag: Paes_2345
so part of: sequence
location: 6542..7015
location: region:6542-7015:1
so has part: feature:6542-7015:1:exon
subclass of: SO_0000010

position:6542:1
position: 6542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7015:1
position: 7015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6542-7015:1:exon

PAES_RS11640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11640
old locus tag: Paes_2345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012474135.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTKKRSVRKNIHPYLPERLYDRFKGYCSKMGVTESSVVEEALTRFLDEQGDMPLVLRKIDRQTRSIERIDRDVKALSEAFSVFVQIYFAHTPEIAAEDKAVAQHDARNRYVKFIDYVAEQISAGRTLVDDLVQDRIGDRDELRRLIEQASRNEDES
SIO_010081: PAES_RS11640
subclass of: SO_0000673
so part of: PAES_RS11640
location: 6542..7015
location: region:6542-7015:1
so has part: feature:6542-7015:1:exon

WP_012509541.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6542-7015:1:exon

PAES_RS11645
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
gene: trbB
locus tag: PAES_RS11645
old locus tag: Paes_2346
so part of: sequence
location: 7224..8201
location: region:7224-8201:1
so has part: feature:7224-8201:1:exon
subclass of: SO_0000010

position:7224:1
position: 7224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8201:1
position: 8201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7224-8201:1:exon

PAES_RS11645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
gene: trbB
locus tag: PAES_RS11645
old locus tag: Paes_2346
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012506271.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer ATPase TrbB
translation: MASLRTAVAPIVDFLDDDNIVEIMLNPDGAVWVEESGRGMYRTSVVMDRDSAERLIRLAAAAMNFEINERRPFLSATLPGWKARLQASVPPIVSSPVFALRKPPSTVFTLQDYVERRVMTPAQASLLEQAVRRKRNIVIGGGTGSGKTTLGNALLQVVADTDDRVYLVEDSTELQCRAENMVQVLVQPPIYTHQQAIMDAMRFRPDRIIVGEVRDGAALELLKAWNTGHPGGIATIHANHAAAILDRFVQLCEEIVHAAPKYLIAEAVDICVHIQRDHHHPAGRVVSDICMVSGLDPRGGWLLEPIGEEACPESVHEYLSDLSPT
SIO_010081: PAES_RS11645
subclass of: SO_0000673
so part of: PAES_RS11645
location: 7224..8201
location: region:7224-8201:1
so has part: feature:7224-8201:1:exon

WP_012509542.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7224-8201:1:exon

PAES_RS11650
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11650
old locus tag: Paes_2347
so part of: sequence
location: 8373..8675
location: region:8373-8675:1
so has part: feature:8373-8675:1:exon
subclass of: SO_0000010

position:8373:1
position: 8373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8675:1
position: 8675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8373-8675:1:exon

PAES_RS11650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11650
old locus tag: Paes_2347
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012286067.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbC/VirB2 family protein
translation: MKKHVLLLPVLILLMSNAAYAASTGMPWEGPLDQLLNSLTGPVSRVIGAVSIISLGLGLAFSEGGGVMRKALWVVMGLAIAYNAVSWGIGFMGFGGGLLV
SIO_010081: PAES_RS11650
subclass of: SO_0000673
so part of: PAES_RS11650
location: 8373..8675
location: region:8373-8675:1
so has part: feature:8373-8675:1:exon

WP_012509543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8373-8675:1:exon

PAES_RS11655
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11655
old locus tag: Paes_2348
so part of: sequence
location: 8672..8923
location: region:8672-8923:1
so has part: feature:8672-8923:1:exon
subclass of: SO_0000010

position:8672:1
position: 8672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8923:1
position: 8923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8672-8923:1:exon

PAES_RS11655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11655
old locus tag: Paes_2348
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012506269.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB3 family type IV secretion system protein
translation: MSEEYSVPVHRSLAEVILIGGLPRTVAILLWTTAGAAGFGMQQLWVLPVAIVLHVVLAMTAKRDPHFFDVFVRALKSPKRLDP
SIO_010081: PAES_RS11655
subclass of: SO_0000673
so part of: PAES_RS11655
location: 8672..8923
location: region:8672-8923:1
so has part: feature:8672-8923:1:exon

WP_012509544.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8672-8923:1:exon

PAES_RS11660
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
gene: trbE
locus tag: PAES_RS11660
old locus tag: Paes_2349
so part of: sequence
location: 8929..11391
location: region:8929-11391:1
so has part: feature:8929-11391:1:exon
subclass of: SO_0000010

position:8929:1
position: 8929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11391:1
position: 11391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8929-11391:1:exon

PAES_RS11660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
gene: trbE
locus tag: PAES_RS11660
old locus tag: Paes_2349
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012506268.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbE
translation: MFNLAQYREPTTRLPDHLPWAALVAPGVILQKDALLQKTVSFRGPDLASSSDAELAAAVGRLNNALRRLGSGWSIFVEAQRQECVSYDPADWIHPAAWLVDKERREQFMQDGAHYESRYYLTFVQALQPGERSGKARRLFYDDPVTRSAAENNERELEAFVKTVQEITDIMQGVFVDVRELDDDETLTYLHSTISSRKHPVKAPDTPMYLDALLPDEAFTNGDIPMLGDNFIPTVTISGFPSESLPGMLDDLNHLEIDYRWVCRYICLDKDEARREIEKYRRQWWSKRKNLFTLLKEEATKESSALLDSDASNKAADADVALQELGEDLVSYGYITCTVTVTHPDLDEARRRMRRVRQVIQSRGFVVRDETLNSKEAWFGSLPGHVYANVRRPMVNTLNLAHMMPLSAIWAGEQANTHLGALTGCSLPHMMCSTTGSTPFRLNLNVGDVGHTLVVGPTGAGKSTLLCMLELQWLKYPDSQVVIFDKDRSARAATMAVGGHYYEPGNEHAPFAFQPLAHIDDQAERVWAAGFVLLLLREQGVKETPALKKEIDSALANLASQTADHRTMTVFTDLVQSREVRDALRPYTIQGNYGQLFDADHEESLKGSWQMIEMNSLMGMHSEALIPALYYLFHRIEQRFDGRPTLLVLDEAWLFLKHDVFMSQMQNWLKTLRKKNVYVVFATQEVADAAESPIMATILSACHTKIYLPDEEALTPGMARAYHTFGLSETEIRLLSQAQKKRDYYYRSPKGRRMFQLEMGDIALSFAGMSSPDDHQFMDRLERENAIGEYASGLLRHRGLDWAAELLEREKARGEEKYSS
SIO_010081: PAES_RS11660
subclass of: SO_0000673
so part of: PAES_RS11660
location: 8929..11391
location: region:8929-11391:1
so has part: feature:8929-11391:1:exon

WP_012509545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8929-11391:1:exon

PAES_RS11665
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
gene: trbJ
locus tag: PAES_RS11665
old locus tag: Paes_2350
so part of: sequence
location: 11408..12166
location: region:11408-12166:1
so has part: feature:11408-12166:1:exon
subclass of: SO_0000010

position:11408:1
position: 11408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12166:1
position: 12166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11408-12166:1:exon

PAES_RS11665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
gene: trbJ
locus tag: PAES_RS11665
old locus tag: Paes_2350
inference: COORDINATES: protein motif:HMM:TIGR02780.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbJ
translation: MIRKYIRMAAVAGIGMTASFTLPPTLHAVWPVIDAANLSRNTVTSVQMVQDVLHQVTQIQNQIRQYEATLQSLQSLDASTWQQVQSLLRAQTGEFNELFYNLDAIGYNLSQIDNQFNTLFPERTDWEDIDTADFEQYYRDWNTELNESAKTAMKAQASIARVQDYNDEVQAILSRSGGAQGEVRQMQAQNQMLAVINNQLGDLTGTISASGRITATMAAKTAAREEAERELNRRAIENYGGKRTDFQFRELP
SIO_010081: PAES_RS11665
subclass of: SO_0000673
so part of: PAES_RS11665
location: 11408..12166
location: region:11408-12166:1
so has part: feature:11408-12166:1:exon

WP_012509546.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11408-12166:1:exon

PAES_RS11670
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11670
old locus tag: Paes_2351
so part of: sequence
location: 12188..12382
location: region:12188-12382:1
so has part: feature:12188-12382:1:exon
subclass of: SO_0000010

position:12188:1
position: 12188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12382:1
position: 12382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12188-12382:1:exon

PAES_RS11670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11670
old locus tag: Paes_2351
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMMKQVRRFVYLGFVIGGMIMSYGCTVNVSESEVGQGEDDVNINEKATENYGGERTDLQLRDLP
SIO_010081: PAES_RS11670
subclass of: SO_0000673
so part of: PAES_RS11670
location: 12188..12382
location: region:12188-12382:1
so has part: feature:12188-12382:1:exon

WP_012509547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12188-12382:1:exon

PAES_RS11675
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
gene: trbL
locus tag: PAES_RS11675
old locus tag: Paes_2352
so part of: sequence
location: 12401..13591
location: region:12401-13591:1
so has part: feature:12401-13591:1:exon
subclass of: SO_0000010

position:12401:1
position: 12401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13591:1
position: 13591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12401-13591:1:exon

PAES_RS11675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
gene: trbL
locus tag: PAES_RS11675
old locus tag: Paes_2352
inference: COORDINATES: protein motif:HMM:TIGR02783.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbL
translation: MNTGILTSTLHTFIDAFNAGYAKLYPHIEWLIWVMLGIELVMLGLWWALGGGEQLAAVMKKLLYLLVWLWIVQNFQTLAKTFVWSLAEAGEIAGGRTPDHKLLTDPTAIINIGLDISAPLADQVGREGWDIGNALAFSLMWLMSALAFLIMGWQMFYALLEFYILITLVGILLPFGFFEPTKFMAEKSIGAVISSGVKLMVLSFIIAISHTILTSLPIPSGFIDLETGLTIVLISGAIAFLAWNAPGIAAGLVVGSPSLSAATGAQNALAAGLAGGGALVATAAAGKFAATKVASLAGKFGSVSTKSGQMASLAKAGGVGGIDGPGGPSQMGATPGGSPGGSPSGTPSGGSSSSGEDRNKSSGKKNPPKWAQQALQASRHIPEEARPSGGDSSPKL
SIO_010081: PAES_RS11675
subclass of: SO_0000673
so part of: PAES_RS11675
location: 12401..13591
location: region:12401-13591:1
so has part: feature:12401-13591:1:exon

WP_012509548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12401-13591:1:exon

PAES_RS11680
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
gene: trbF
locus tag: PAES_RS11680
old locus tag: Paes_2353
so part of: sequence
location: 13629..14321
location: region:13629-14321:1
so has part: feature:13629-14321:1:exon
subclass of: SO_0000010

position:13629:1
position: 13629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14321:1
position: 14321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13629-14321:1:exon

PAES_RS11680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
gene: trbF
locus tag: PAES_RS11680
old locus tag: Paes_2353
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012506264.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbF
translation: MKAQTKTWKPEGDPATPYRRAQKEWDDRMGSAIVQAKNWRLATFATICFIALPSLCGMIYLGSQPKAVPHIVEVQQDGSAVYHGPAGKAWEQYTPSAASVRYHLSRFVTNTRMISSDQAVVKRNWLDAYSLLTPSARNTLNEYARKHDPFIRSERERVSVQVLSMVPMSSDSWQIDWREDTWGPRGESMGQSYWRGIFRVITQKPETEEMLAGNPIGLYIDEFHWSKIQR
SIO_010081: PAES_RS11680
subclass of: SO_0000673
so part of: PAES_RS11680
location: 13629..14321
location: region:13629-14321:1
so has part: feature:13629-14321:1:exon

WP_012509549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13629-14321:1:exon

PAES_RS11685
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
gene: trbG
locus tag: PAES_RS11685
old locus tag: Paes_2354
so part of: sequence
location: 14412..15266
location: region:14412-15266:1
so has part: feature:14412-15266:1:exon
subclass of: SO_0000010

position:14412:1
position: 14412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15266:1
position: 15266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14412-15266:1:exon

PAES_RS11685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
gene: trbG
locus tag: PAES_RS11685
old locus tag: Paes_2354
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012506263.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbG
translation: MLEASLEPEQPAPEVRITPTPLAQNRQQPLPKPDHPEQQNHRPWLVIEQANASSAQNPDSHGYFNAIMTYDYTEGYLYQVYTAPLRLTDIQLQPGEKIVGTPAAGDTVRWVVGVGRSIKDGKEQQHIYVKPTKPGLQTTLIVTTDRRTYHIELHSYRETYMASVAWSYPHDDLREQISQIRSTTDPQVDISKLNFDYTVRVKNGRQPAWLPVKVFDDGTKTFIQFSRDMLVREAPALFVLGEEGSAQLVNYRMKNNYYIVDRLFDRAELRLGENNQNIVRIVRR
SIO_010081: PAES_RS11685
subclass of: SO_0000673
so part of: PAES_RS11685
location: 14412..15266
location: region:14412-15266:1
so has part: feature:14412-15266:1:exon

WP_049753736.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14412-15266:1:exon

PAES_RS12170
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS12170
old locus tag: Paes_2355
so part of: sequence
location: 15285..16571
location: region:15285-16571:1
so has part: feature:15285-16571:1:exon
subclass of: SO_0000010

position:15285:1
position: 15285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16571:1
position: 16571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15285-16571:1:exon

PAES_RS12170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS12170
old locus tag: Paes_2355
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012506262.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbI/VirB10 family protein
translation: MNEENDMLPKDHDPHVSKIDPDDPRLRIRRPAGRSLKKGPVIAIIAVLSGALLLAVTLALLPTKQQEKVKEEQPVAYGQNTIPDFIRNAPDNDDPVRMPADPVITAPVPDSVPQLGRKLPGDLGATMVSSPGRSGSYSGGQKSPEEQAYESALASGPFFSGPAGTSGLSPQGIMTAQQGGPMLDGYARRLESAAQAASMPGLFTPPDPNRQDRKNDFLDGTDQQRTTSVSGMMTPPASPYEVKAGAIIPVTLLTGINSDLPGDIIGQVRENVYDTVSGEYLLIPQGSRLMASYDSMVSYGQKRVLVCWNRLIRPDGSSVSLECMPGVDLEGYAGFHDRVDNHYDRLIGGVILSSVLSLGATTSQGEWNGYDDMNAAQMFAANAGGEISNAGDKVTSRNLDIQPTLKIRPGYSVNVLVHKDMIIPPYYQ
SIO_010081: PAES_RS12170
subclass of: SO_0000673
so part of: PAES_RS12170
location: 15285..16571
location: region:15285-16571:1
so has part: feature:15285-16571:1:exon

WP_012509551.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15285-16571:1:exon

PAES_RS11695
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11695
old locus tag: Paes_2356
so part of: sequence
location: 16592..16867
location: region:16592-16867:1
so has part: feature:16592-16867:1:exon
subclass of: SO_0000010

position:16592:1
position: 16592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16867:1
position: 16867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16592-16867:1:exon

PAES_RS11695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11695
old locus tag: Paes_2356
inference: COORDINATES: protein motif:HMM:NF021549.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2274 domain-containing protein
translation: MIDLSLPVLKEPVKRCFRIPGDLSDEFELYVEAARQKEPAADESVVLEAILRSHLKRDRGFRSWLQKRRRAQKQEDSGMAGQHSSTNGYGQ
SIO_010081: PAES_RS11695
subclass of: SO_0000673
so part of: PAES_RS11695
location: 16592..16867
location: region:16592-16867:1
so has part: feature:16592-16867:1:exon

WP_012509552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16592-16867:1:exon

PAES_RS11700
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11700
old locus tag: Paes_2357
so part of: sequence
location: 16857..17816
location: region:16857-17816:1
so has part: feature:16857-17816:1:exon
subclass of: SO_0000010

position:16857:1
position: 16857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17816:1
position: 17816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16857-17816:1:exon

PAES_RS11700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11700
old locus tag: Paes_2357
inference: COORDINATES: protein motif:HMM:NF024554.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF3991 and TOPRIM domain-containing protein
translation: MDSELQRFKTDISLSEYAASRGYRLDRRESSRNSIVMRHDASNDKVIMTRQHDGHWTYFSVRDRSDHGSIVDFIQRRTRMNIGEVRCELRPWLDGGGTVSRPEPGTFTRDLRPVVRDRSKVLEAFSRTWPVRHSSYLEERGITAATLRDFRFRGRVRTDRKGNVVFPYYDRQGLCGFEMKNRGYTGFSKHGAKGLWTSRAVLSDNRLVLAESPIDALSYHQLHGDARTRYISMGGQYREEQKEMVVSAMKHMSAGSTVLMAFDNDTQGMVFADEFTRLAPEHVGVIRALPETGKDWNDQLRAMMGPGQSGSRAKDPCRT
SIO_010081: PAES_RS11700
subclass of: SO_0000673
so part of: PAES_RS11700
location: 16857..17816
location: region:16857-17816:1
so has part: feature:16857-17816:1:exon

WP_012509553.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16857-17816:1:exon

PAES_RS12680
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS12680
so part of: sequence
location: 18449..18739
location: region:18449-18739:1
so has part: feature:18449-18739:1:exon
subclass of: SO_0000010

position:18449:1
position: 18449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18739:1
position: 18739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18449-18739:1:exon

PAES_RS12680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS12680
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQKSVKPPWPQAAKTDEEHSAEAERKSCSEADVRPCPTVCHGICSGRADTAPAGPALDGCAWWGGSEVKPPGPCTDPAGNNLQAEAHSTVNVTHRS
SIO_010081: PAES_RS12680
subclass of: SO_0000673
so part of: PAES_RS12680
location: 18449..18739
location: region:18449-18739:1
so has part: feature:18449-18739:1:exon

WP_150084564.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18449-18739:1:exon

PAES_RS11705
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11705
so part of: sequence
location: 18844..19134
location: region:18844-19134:1
so has part: feature:18844-19134:1:exon
subclass of: SO_0000010

position:18844:1
position: 18844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19134:1
position: 19134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18844-19134:1:exon

PAES_RS11705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11705
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQKSVKPPWPQAAKTDEEHSAEVERKSCSKADVRPCPTVCHGICRGRADTAPAGPALDGCAWWGGSEVKPPGPCTDPAEENLQAEARSAVEVTHRS
SIO_010081: PAES_RS11705
subclass of: SO_0000673
so part of: PAES_RS11705
location: 18844..19134
location: region:18844-19134:1
so has part: feature:18844-19134:1:exon

WP_153304039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18844-19134:1:exon

PAES_RS11715
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11715
old locus tag: Paes_2361
so part of: sequence
location: 20352..21032
location: region:20352-21032:1
so has part: feature:20352-21032:1:exon
subclass of: SO_0000010

position:20352:1
position: 20352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21032:1
position: 21032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20352-21032:1:exon

PAES_RS11715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11715
old locus tag: Paes_2361
inference: COORDINATES: protein motif:HMM:NF014626.2
GO function: GO:0008233 - peptidase activity [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO process: GO:0018142 - protein-DNA covalent cross-linking [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SOS response-associated peptidase
translation: MCGRYVLFISLKDLARIFRVTQLSFEFSASYNIAPTQTVPIVTGGAERSLVPARWGFVPSWAEDMSIGQRMINARSETVAEKPAFRKAFHSHRCIVPANGFYEWKQVGRSKQPVYIHLRSDRVMAMAGIFNTWTSPDGVRLVTFAVITTPSNDLVKPIHNRMPAILHEGDYEMWLDPGTSAEKHLAGLLQSLPSDELDAYEVSTRVNIPANDSSDNIQPLQTGLGL
SIO_010081: PAES_RS11715
subclass of: SO_0000673
so part of: PAES_RS11715
location: 20352..21032
location: region:20352-21032:1
so has part: feature:20352-21032:1:exon

WP_012509557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20352-21032:1:exon

PAES_RS11720
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11720
old locus tag: Paes_2362
so part of: sequence
location: 21091..21303
location: region:21091-21303:1
so has part: feature:21091-21303:1:exon
subclass of: SO_0000010

position:21091:1
position: 21091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21303:1
position: 21303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21091-21303:1:exon

PAES_RS11720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11720
old locus tag: Paes_2362
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKPSLVQTHPKLRSEQEHREILFREVISSSRIEAITCAEKVLRNIFPSGASVKTGLVKNSTHKIQGLVPE
SIO_010081: PAES_RS11720
subclass of: SO_0000673
so part of: PAES_RS11720
location: 21091..21303
location: region:21091-21303:1
so has part: feature:21091-21303:1:exon

WP_150084567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21091-21303:1:exon

PAES_RS11725
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11725
so part of: sequence
location: complement(21461..21733)
location: region:21461-21733:-1
so has part: feature:21461-21733:-1:exon
subclass of: SO_0000010

position:21461:-1
position: 21461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21733:-1
position: 21733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21461-21733:-1:exon

PAES_RS11725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11725
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAACSERQNRHAFFSGNSNRYQSIAEWYGVFARQGGQEEGKKGRTTVYDYSTCAERSGTRSGTFMSRSWTPIEPPDVLPEQLQLGAMAAV
SIO_010081: PAES_RS11725
subclass of: SO_0000673
so part of: PAES_RS11725
location: complement(21461..21733)
location: region:21461-21733:-1
so has part: feature:21461-21733:-1:exon

WP_041702672.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21461-21733:-1:exon

PAES_RS11730
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11730
old locus tag: Paes_2363
so part of: sequence
location: 21882..22709
location: region:21882-22709:1
so has part: feature:21882-22709:1:exon
subclass of: SO_0000010

position:21882:1
position: 21882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22709:1
position: 22709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21882-22709:1:exon

PAES_RS11730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11730
old locus tag: Paes_2363
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011744527.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zincin-like metallopeptidase domain-containing protein
translation: MSVKVYQIITDRIIRQLEEGVVPWRKEWQAGLPKNLVSGKEYRGINLMLLAEANCEYFVTKKQVSSLGGRIRCKGYPVIYWNIIEKEDPETGEIRSIPFLRYYRVYPVSGVEGIEDPECNNRDNPVDAAEQVIEGMPDRPVIEYGGDRACYIPARDMIRLPARSSFYSIEGFYSTAFHELVHSTGHASRLNRKGIAELEGYGTHSYSEEELVAEMGAAFLSGHCGILNQTLENSAVYISHWIGALKADPKLIVQIGAQAQKAVDYILGATDKDPG
SIO_010081: PAES_RS11730
subclass of: SO_0000673
so part of: PAES_RS11730
location: 21882..22709
location: region:21882-22709:1
so has part: feature:21882-22709:1:exon

WP_012509559.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21882-22709:1:exon

PAES_RS11735
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11735
old locus tag: Paes_2364
so part of: sequence
location: complement(22781..23002)
location: region:22781-23002:-1
so has part: feature:22781-23002:-1:exon
subclass of: SO_0000010

position:22781:-1
position: 22781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23002:-1
position: 23002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22781-23002:-1:exon

PAES_RS11735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11735
old locus tag: Paes_2364
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNEQQNVDQHMKIHEFDHKENRYEIHAIRMHDNTFRISFQCNDRDNNSSITIYEEDPEDTVRYLEQSIRDKGN
SIO_010081: PAES_RS11735
subclass of: SO_0000673
so part of: PAES_RS11735
location: complement(22781..23002)
location: region:22781-23002:-1
so has part: feature:22781-23002:-1:exon

WP_150084569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22781-23002:-1:exon

PAES_RS11740
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11740
old locus tag: Paes_2365
so part of: sequence
location: 23191..23481
location: region:23191-23481:1
so has part: feature:23191-23481:1:exon
subclass of: SO_0000010

position:23191:1
position: 23191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23481:1
position: 23481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23191-23481:1:exon

PAES_RS11740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11740
old locus tag: Paes_2365
inference: COORDINATES: protein motif:HMM:NF013014.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: H-NS histone family protein
translation: MRELQEQEQMILQREKVKVIAGIRSKMAEFDLSESDIFGGAKPASGSKKPKMIRYYDPKRGIKWAGRGRKPPEFEELSQEELDRFRLDTPVPADAL
SIO_010081: PAES_RS11740
subclass of: SO_0000673
so part of: PAES_RS11740
location: 23191..23481
location: region:23191-23481:1
so has part: feature:23191-23481:1:exon

WP_279614956.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23191-23481:1:exon

PAES_RS11745
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11745
old locus tag: Paes_2366
so part of: sequence
location: 23656..25647
location: region:23656-25647:1
so has part: feature:23656-25647:1:exon
subclass of: SO_0000010

position:23656:1
position: 23656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25647:1
position: 25647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23656-25647:1:exon

PAES_RS11745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11745
old locus tag: Paes_2366
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019027533.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2779 domain-containing protein
translation: MTQHRYLTKSRFRLAMECPTKLFYCGKTDEYADQSLDDPFLAALADGGFQVGALAKQYYPWGHEIRTLNVDEALEKTAELLKLDSVTIYEAAFRYENLFIRVDILRKQGRRIELIEVKSKSFSSEEEQTPFLGKKGSFLSGWKPYLYDVAFQAYVLGQAMPDHEVVPFLMLADKAARCPADGLNQKFRIRRNSEQRSFVTVSDQLTSQDLSVPMLKAVPVGDCVDKIRKGEGTDDFVARGFEGTVQWLADHYLRNEKITPVPGAFCRDCSFRATDPDVAAGLKSGFKECWTEAYGWQERDFEAETLFALWDFRDKDSAMANGKLKLVDLEEGDIAYKDDGKPGLSRTARQLVQLQKAKNGDMTPYIDRDGLQREMDSWRFPLHFIDFETSVTPIPFTKGRSPYETVAFQFSHHMVGQDGTVRHAGEYLCGERGRFPNFEFVGQLKKALEKDHGTIFRYSHHENTVLISIYHQLAESDLDADERQELMDFIVSVTESTGRNGTAWSGGPRNMVDLCHLVKRYYYDPYTRGSNSIKYVLPAVLNSSAYLQNKYGSPVYGTTEIPSFNFRNWQWIKHADDGTVKDPYSLLPLLFSDIDDRNQLLLLSGDEEQAIKNGGAAMTAYARLQYEEMGEYERSGIMTGLKKYCELDTLAMVMIYEAWRRWL
SIO_010081: PAES_RS11745
subclass of: SO_0000673
so part of: PAES_RS11745
location: 23656..25647
location: region:23656-25647:1
so has part: feature:23656-25647:1:exon

WP_012509562.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23656-25647:1:exon

PAES_RS11750
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11750
old locus tag: Paes_2367
so part of: sequence
location: 25714..27243
location: region:25714-27243:1
so has part: feature:25714-27243:1:exon
subclass of: SO_0000010

position:25714:1
position: 25714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27243:1
position: 27243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25714-27243:1:exon

PAES_RS11750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11750
old locus tag: Paes_2367
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015325373.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MALAVNIHELVNGQVIEWERLEFKQGWNPQDVLHTMCAFANDINNWGGGYIIIGIAEDDGRPVLPPAGLNPDSLDRIQGELTTLCHRLEPLYMPVAEPYVLHSKHILAIYCPAGDVRPYTAPASLEKGPQPRFHYIRSGSRTIKAQGEHVRRLQELAARIPYDDRVHPEAQLNDLDLGLIRSFLGEIRSELFEESSSMPFDQLCRLMNIARGPDEALRPLNAGLLFFSREPERFFSRAWIEVVLRKDEAGKDFTERYFRGPLHHQLREALTFIRTSIIEERVRKVPGQAEAERFFNFPFEAVEEALANAVYHKSYELGSPIEVQIWPDKIEILSFPGPVPPVTAEVLARNRRIVARDYRNRRVGDFLKELHLTEGRGTGIPTIKRAMELNGSPAPLFETDEDSSYFLTVLPAHDIVPLNGSDEVSDEVSDEVSDEVPLNIRVLHYCIKPRSRAEILEHLGLAAHTTNYNRHIRPLVEEGLLAMTHPDVPRSQHQRYILTESGRKRLSNR
SIO_010081: PAES_RS11750
subclass of: SO_0000673
so part of: PAES_RS11750
location: 25714..27243
location: region:25714-27243:1
so has part: feature:25714-27243:1:exon

WP_012509563.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25714-27243:1:exon

PAES_RS11755
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11755
old locus tag: Paes_2368
so part of: sequence
location: 27352..27720
location: region:27352-27720:1
so has part: feature:27352-27720:1:exon
subclass of: SO_0000010

position:27352:1
position: 27352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27720:1
position: 27720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27352-27720:1:exon

PAES_RS11755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11755
old locus tag: Paes_2368
inference: COORDINATES: protein motif:HMM:NF014821.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thermonuclease family protein
translation: MHNARNKELLKAGLAWNYKKYSSDQEVAALEEQARQQKIGVWGSQNAIAPWQFRNEGKSVATIKNNSQPADIENIIYHGNVRNKKFYKPSCRHYNCKNCVKEFTSREKAIQARYEPCGTCKP
SIO_010081: PAES_RS11755
subclass of: SO_0000673
so part of: PAES_RS11755
location: 27352..27720
location: region:27352-27720:1
so has part: feature:27352-27720:1:exon

WP_012509564.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27352-27720:1:exon

PAES_RS11760
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11760
old locus tag: Paes_2369
so part of: sequence
location: 28105..29352
location: region:28105-29352:1
so has part: feature:28105-29352:1:exon
subclass of: SO_0000010

position:28105:1
position: 28105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29352:1
position: 29352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28105-29352:1:exon

PAES_RS11760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11760
old locus tag: Paes_2369
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLDANGNPVNYNIPVFTPSESYFEIRINEQFLRDKRTYWHNYNPLVVTLTDFLYQTGRQDVPYVVGPNVLSKINQYAQNNSISYLNTRVAGPTPYLGDDIAVFIGLFRTKSTDWIKQTLQLLESVAGSFDTTKLSTGYLSIAKSIIDGIEGILGIQQDVQFRIGQREAYTSPSPAGGNSLLPGYHVMINDSQSNINPNDFRVMNNRLYKKTANNSLVPYSDQDFILWEIRHLDTRDDYISFDFDKQWRKTGELILSGGIHENSFREVLRLIYINSDLTETQRESLMMFYKKEYENAVAKRKSLFSENENHLLLQKIQPLLLPTANDIDINHTLNRLERRGISNQVLNAFSRTHELIRSEHIHAEVESPAHENGPREITNDDLIDAIKSDTFKIPAVQSIDIDELYEALTLGLGEE
SIO_010081: PAES_RS11760
subclass of: SO_0000673
so part of: PAES_RS11760
location: 28105..29352
location: region:28105-29352:1
so has part: feature:28105-29352:1:exon

WP_150084571.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28105-29352:1:exon

PAES_RS11765
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11765
old locus tag: Paes_2370
so part of: sequence
location: 29361..30293
location: region:29361-30293:1
so has part: feature:29361-30293:1:exon
subclass of: SO_0000010

position:29361:1
position: 29361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30293:1
position: 30293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29361-30293:1:exon

PAES_RS11765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11765
old locus tag: Paes_2370
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHQPTSHLVFVYSYNSNLTELMLTTRTRVPRLAGYRLLLCCIPVFLASCAQSVHQSITPFTQSISSVEHSSQKLLLEFNQHIRELQVERAVTLKTLSEQDFTPGVTAQAKIRWQKAFDALRMYASALEALSDPKTVSGADKSITMIGNQMLSISSTSLPQATELNSQIGHIAQLLLQQSASKKAMEIASEADPSIRALLLHMRTMIEDLRITNRTSWTTKASKHQVAFLEDGADKAGEAKSYATVLEYREISDTAFYSLGVTLQYLADMHTAIAQGRTEDAENLHHMIDQETRNIECLQKMIGNSHSSKQ
SIO_010081: PAES_RS11765
subclass of: SO_0000673
so part of: PAES_RS11765
location: 29361..30293
location: region:29361-30293:1
so has part: feature:29361-30293:1:exon

WP_012509566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29361-30293:1:exon

PAES_RS11770
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11770
old locus tag: Paes_2371
so part of: sequence
location: 30308..30652
location: region:30308-30652:1
so has part: feature:30308-30652:1:exon
subclass of: SO_0000010

position:30308:1
position: 30308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30652:1
position: 30652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30308-30652:1:exon

PAES_RS11770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11770
old locus tag: Paes_2371
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEESSVNTSIKKLQAVLLEEFEQLTRELGWTTDPDQAKKIQTEIQEIHHRIAIAGSLLFSRQSLELEEKTRLVLEEKSKVDEAIADLTDMCNFLTAVTAFLALVDEALDYAKML
SIO_010081: PAES_RS11770
subclass of: SO_0000673
so part of: PAES_RS11770
location: 30308..30652
location: region:30308-30652:1
so has part: feature:30308-30652:1:exon

WP_012509567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30308-30652:1:exon

PAES_RS11775
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
gene: nlpM
locus tag: PAES_RS11775
old locus tag: Paes_2372
so part of: sequence
location: 30785..32176
location: region:30785-32176:1
so has part: feature:30785-32176:1:exon
subclass of: SO_0000010

position:30785:1
position: 30785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32176:1
position: 32176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30785-32176:1:exon

PAES_RS11775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
gene: nlpM
locus tag: PAES_RS11775
old locus tag: Paes_2372
inference: COORDINATES: protein motif:HMM:TIGR04064.1
GO function: GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO process: GO:0030152 - bacteriocin biosynthetic process [Evidence IEA]; GO:0031179 - peptide modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nif11-like peptide radical SAM maturase
translation: MPPIQSEDHFSVKGIATFHFFSYRGSYYRISANEMSSEKISRAEFLEAIVNRFPQESDASIHEQLTDSGSRHAPEPLEKEHPVAGMDLFVAQTCNLSCVYCYGQDGTYGDRGLMSEKTALQAIDWLIEASGPVKSLRINFFGGEPLLNFPLIKTVVPYALARAEKAEKKALFQITTNGTLLDDEIIRFFQQHEFKVLVSIDGPQDIHDRQRRFADGNGSFKAVTQHLDNLVKNVPETDAHAVILGDTDPDIVINALRKFGFRGISVLPASGSVFITEEDPGKNRDTASILKHMEDEAELWLNLTKKRAIKQLQQLQTYSQFTAAVKSLLQHRKNYHPCGAAIGLVAVSCSGDIYPCHRFVGQEKHRIGDLSGHELNRNEYLKSPVMTNEHCMKCYARYYCAGGCKQDNIISGGSLYQPSEDMCRLRRRQFELAAYIVSELDKDGKLFLEQEGIIPPKPCPLDF
SIO_010081: PAES_RS11775
subclass of: SO_0000673
so part of: PAES_RS11775
location: 30785..32176
location: region:30785-32176:1
so has part: feature:30785-32176:1:exon

WP_012509568.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30785-32176:1:exon

PAES_RS12175
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS12175
old locus tag: Paes_2373
so part of: sequence
location: complement(32257..32535)
location: region:32257-32535:-1
so has part: feature:32257-32535:-1:exon
subclass of: SO_0000010

position:32257:-1
position: 32257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32535:-1
position: 32535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32257-32535:-1:exon

PAES_RS12175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS12175
old locus tag: Paes_2373
inference: COORDINATES: protein motif:HMM:TIGR03798.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Nif11-like leader peptide family natural product precursor
translation: MSQTSATAFIERLKNDDDFLAQVVSCSDARTRMDFVRVEGYDFSADELETLRGGFTDDDLSRTRFQESRLGYDGPLGHGQDPEPEPNPPSLN
SIO_010081: PAES_RS12175
subclass of: SO_0000673
so part of: PAES_RS12175
location: complement(32257..32535)
location: region:32257-32535:-1
so has part: feature:32257-32535:-1:exon

WP_012509569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32257-32535:-1:exon

PAES_RS11785
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11785
so part of: sequence
location: complement(32815..33081)
location: region:32815-33081:-1
so has part: feature:32815-33081:-1:exon
subclass of: SO_0000010

position:32815:-1
position: 32815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33081:-1
position: 33081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32815-33081:-1:exon

PAES_RS11785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11785
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRYRELPWLFSSHIPGGTKALSVQANFLRKGGSDLHKCNAEENGPCAKQANCTTFAALPSGDMTPLLRPWRHDISSGAGVVIAAMQQA
SIO_010081: PAES_RS11785
subclass of: SO_0000673
so part of: PAES_RS11785
location: complement(32815..33081)
location: region:32815-33081:-1
so has part: feature:32815-33081:-1:exon

WP_150084573.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32815-33081:-1:exon

PAES_RS11790
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11790
old locus tag: Paes_2374
so part of: sequence
location: 33094..33591
location: region:33094-33591:1
so has part: feature:33094-33591:1:exon
subclass of: SO_0000010

position:33094:1
position: 33094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33591:1
position: 33591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33094-33591:1:exon

PAES_RS11790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11790
old locus tag: Paes_2374
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013362734.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: JAB domain-containing protein
translation: MNNNLSLPLFNQNAERSETTASVPLYSVRLVRESSITFIHPAITRCDIAYDFFCKIGLQDKASEEFYALYLDTKNKIIGLEMISRGTLNASLVHPREVFKGAFLANANSIMLAHNHPSGNTEPSSADKLVTSRLVKAGKLLDLQVLDHIIVGDKGYYSFRESGLI
SIO_010081: PAES_RS11790
subclass of: SO_0000673
so part of: PAES_RS11790
location: 33094..33591
location: region:33094-33591:1
so has part: feature:33094-33591:1:exon

WP_012509570.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33094-33591:1:exon

PAES_RS11795
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11795
old locus tag: Paes_2375
so part of: sequence
location: 33695..34201
location: region:33695-34201:1
so has part: feature:33695-34201:1:exon
subclass of: SO_0000010

position:33695:1
position: 33695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34201:1
position: 34201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33695-34201:1:exon

PAES_RS11795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11795
old locus tag: Paes_2375
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MERYQVGQLFPIEQLCTGQEQYVGIPTTSFFNVLLSLRNISAKERNLFEKGSITAYLFEQEDVPFFVFDFGQGFCFDIAFDITRFDQETLHDWLSSRGNGVTLFLVDAATGIIEAIRLIGIGFADEFRAVCARQEGQKDIAARARLIQQAFTTQDMIRHATAKTEFRR
SIO_010081: PAES_RS11795
subclass of: SO_0000673
so part of: PAES_RS11795
location: 33695..34201
location: region:33695-34201:1
so has part: feature:33695-34201:1:exon

WP_012509571.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33695-34201:1:exon

PAES_RS11800
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11800
old locus tag: Paes_2376
so part of: sequence
location: 34362..34673
location: region:34362-34673:1
so has part: feature:34362-34673:1:exon
subclass of: SO_0000010

position:34362:1
position: 34362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34673:1
position: 34673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34362-34673:1:exon

PAES_RS11800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11800
old locus tag: Paes_2376
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHLQSGIDWNYDDEDDDPDAPVHSELWPEQQWKDSDFRSILNDLQSAKLCPDRKDREYFLQTALLKIQIMQGVKGANKILDRVIATGAATAEALLRRFEGGNN
SIO_010081: PAES_RS11800
subclass of: SO_0000673
so part of: PAES_RS11800
location: 34362..34673
location: region:34362-34673:1
so has part: feature:34362-34673:1:exon

WP_012509572.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34362-34673:1:exon

PAES_RS11805
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11805
old locus tag: Paes_2378
so part of: sequence
location: complement(35042..36319)
location: region:35042-36319:-1
so has part: feature:35042-36319:-1:exon
subclass of: SO_0000010

position:35042:-1
position: 35042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36319:-1
position: 36319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35042-36319:-1:exon

PAES_RS11805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11805
old locus tag: Paes_2378
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012506732.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Y-family DNA polymerase
translation: MFALVDCNNFYVSCERVFNPSLNGRPVVVLSNNDGCIIARSNEAKALGIAMGTPEFRCRKLLKQNNVAVFSSNYPLYGDMSSRVMLTLAEFTPAIEVYSIDESFLDLSGFNRFDLKDYCQDIRKTAGRFTGIPVSIGIGPTKTLAKIANRFAKKYSGFEGVCILQKKEDIRKALEQTAVGDIWGIGRQWSRLLQVGRILSAEQFASTSPVWVRRHLHVTGARIQAELNGHSCLPLEEVRPAKQSICTSRSFGRSVNSEPELEQAVATFSGRCARKLRKEGLCASLITVFAGTSPFDPAAQRYWGSRTAALTVPSQDSITLGKAARAVLASVYQPDYGYRKAGVMVSGMVPADQAGGKELSLFDEQDTLQDDKTRKLMKAMDALNEQYGQGTVYLASENADAWKPHQEWLSPCYTTRWSDIIEVNA
SIO_010081: PAES_RS11805
subclass of: SO_0000673
so part of: PAES_RS11805
location: complement(35042..36319)
location: region:35042-36319:-1
so has part: feature:35042-36319:-1:exon

WP_012509574.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35042-36319:-1:exon

PAES_RS11810
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11810
old locus tag: Paes_2379
so part of: sequence
location: 36661..37887
location: region:36661-37887:1
so has part: feature:36661-37887:1:exon
subclass of: SO_0000010

position:36661:1
position: 36661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37887:1
position: 37887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36661-37887:1:exon

PAES_RS11810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11810
old locus tag: Paes_2379
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020579820.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4143 domain-containing protein
translation: MPSLPAIVLEGPKGVGKTATAEGRCNTIFCMDDPAVQAIAEADISHLLNQKSPLLIDEWQRVPSIWDAVRRAVDRDQTPGRFLLTGSASPATPPTHSGAGRIVTLRMRPMSLPERGIGTPRISLQHLLKGDKADISGTTDVTLADYVHEIVHSGFPAIRPLSGRALRMQLDGYLRRIIDTDFPEQGYLVRRPEMLHRWLAAYAAATATTASFETIRDAASGGHRNKPSKTTTQPYRDILERLWIVDPVPAWSPSRNRLSRLAQPPKHHLADPALAARILGLDEQALLTGKEPSLSIPRNGSLLGHLFESLVTLGIRVFAQAAEAQVSHLRLHGGRQEIDMIVERGDQRIIAIEVKLSKNVNDSDVRNLLWLREQIGDDLLDSMVIHTGPQAYRRSDGIAVIPAAVLGP
SIO_010081: PAES_RS11810
subclass of: SO_0000673
so part of: PAES_RS11810
location: 36661..37887
location: region:36661-37887:1
so has part: feature:36661-37887:1:exon

WP_012509575.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36661-37887:1:exon

PAES_RS11815
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
gene: fxsT
locus tag: PAES_RS11815
old locus tag: Paes_2380
so part of: sequence
location: complement(38085..40442)
location: region:38085-40442:-1
so has part: feature:38085-40442:-1:exon
subclass of: SO_0000010

position:38085:-1
position: 38085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40442:-1
position: 40442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38085-40442:-1:exon

PAES_RS11815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
gene: fxsT
locus tag: PAES_RS11815
old locus tag: Paes_2380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012505673.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FxSxx-COOH system tetratricopeptide repeat protein
translation: MDQEKKDFFISYTGADQQWAEWIAWQLEKAGYTTVLQAWDFHAGSNFVQDMQTALEKVQRTIAVLSPRYLQSAYARAEWSAVFAEDPTGEKGILIPVRIEPCELKGLHKAIVYIDLVRKERKNAQAFLLKELQHVLEKSSRKPKQEPGYPGEFKPEPRYPGSLPDVWNIPRRNPNFTGRDQLLQDLHASLTDGNHTALTQQALHGLGGIGKSQLAIEYAYRYSTSYAHAWWIRAEEDASIITDYAALATALQLPEKDAEEQKVIIEAVRRWLNTHHGWLLVFDNVRDAASIRHYLPDGTGGHVLITSRNPDWRTIGRPLQVTVWERDESIAFLKQRTGQDQQENSDANELADELGDLPLALEQAAAFIEKRHITISEYLNLYRTRRKDLLDRTTPSDDYPDTIATTWVMAFEAIRDVPLASDLLFFSSIIAPDAIPKDLIKQALEQRVDDQDHEEQSIDELDFHDAIDALCSYSLISPDTDTFSIHRLVQAITQDRMGPEAIAHYRKEMLQSLLALFPEDAHNTPSCWRLCAELLPHAEKIIEKSDPSVNMATLLNNMGSYYHGRAFYAEAEPLYRRALDIYEKQLGGEHPYVATSLNNLAELFRAQGKYGEAEPLYRRALGIDEKALGLEHPEVATDLNNLALLLDAQGKYGEAEPLYRRALDIYEKQLGGEHPYVATSLNNLAGLLYAQGKYGEAEPLYRRALLIREEQLGGEHPYVATSLNNLAGLLDAQGKYGEAEPLYRRALGICEQSLGASHPNTITMQNNLEVLLEKMKDSGDREKKS
SIO_010081: PAES_RS11815
subclass of: SO_0000673
so part of: PAES_RS11815
location: complement(38085..40442)
location: region:38085-40442:-1
so has part: feature:38085-40442:-1:exon

WP_012509576.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38085-40442:-1:exon

PAES_RS11820
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11820
old locus tag: Paes_2381
so part of: sequence
location: complement(40562..41152)
location: region:40562-41152:-1
so has part: feature:40562-41152:-1:exon
subclass of: SO_0000010

position:40562:-1
position: 40562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41152:-1
position: 41152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40562-41152:-1:exon

PAES_RS11820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11820
old locus tag: Paes_2381
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012509577.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MRLFGYARVSTGQQSLDLQVKTLKAAGVKPYRLFTDTESGSTMHRDGLLALRHKVEEGDVILITKLDRLGRDTADMIQLIKEFDELGVAVRFLDDGISTEGAMGTMVVTILSAVAQAERQRILERTNEGRMEAKAKGVQFGRKRSIDRKKVLALKEQGLGATDIARQMNIGRSTVYVILQDEKKRTMQRGKLSGGT
SIO_010081: PAES_RS11820
subclass of: SO_0000673
so part of: PAES_RS11820
location: complement(40562..41152)
location: region:40562-41152:-1
so has part: feature:40562-41152:-1:exon

WP_012509577.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40562-41152:-1:exon

PAES_RS11825
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11825
old locus tag: Paes_2382
so part of: sequence
location: complement(41349..43652)
location: region:41349-43652:-1
so has part: feature:41349-43652:-1:exon
subclass of: SO_0000010

position:41349:-1
position: 41349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43652:-1
position: 43652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41349-43652:-1:exon

PAES_RS11825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11825
old locus tag: Paes_2382
EC number: 3.1.21.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012502293.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]
GO process: GO:0009307 - DNA restriction-modification system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: restriction endonuclease
translation: MYDFKTLSAYDFELLVRDLLQKRLCVDLESFKSGRDGGVDLRYAPANDNELVVQCKHYAATGYTGLLSSLKKENMKVKRLAPSRYCIATSVPLTPDNKREIRSIFTPFSQSESDIFGLEDLNNLLSQYPDVERHHYKLWLTSTTVLERIVHSNVYNQTVQLVEEIQQKVRFYVQNTSFFDAVELLKEYRYCIVSGNPGIGKTFLAQMLLLEYIRQGYEPVVVRSHISEAFKLLKGNTKQVFYYDDFLGQTGWEDKLEKNEEQSILDFIAYVRSHKHAVFVLTTREYILQQARSVYEKLHAADFDNAKCIIELASYTRRNRAHILLNHVFFSDIPQEHKKELARKRNLLPIVDHRNYSPRIVEWMSGVQNIHGCSPGDYPDTFIKKLDDPENLWLHAYRNHLSPAARSMLLVLFSFQSPVDSDDLREAYESFRSLEAKRFGAMRAANEFTTVLDELEGSFIRCELNAHSVAVAFHNPSVRDFLEKHMSLNSDQAALLCDSLVFYDQFRGAFTPRATRHQRNPTRIGEGLERASIASAALRTVTRAAKRHFVNIKQDGTGHAVTMISTNLEMNIAHAIRMTADLPDSERTSLAVQVLVHEEKRIEEGTASPSHLPEVLSAATSVPGIEDVTERLINAGARLYDAANEYEELDQFVALRDFIKAAPGAIEEELILAVGEKLSQDADTVFDCEIDQADNDSQLDELEDTATSFELVFGASLESIYELVEERKEELKMLYDEPPNDWHDEDPMRDREATDSEIVEMFGCLSE
SIO_010081: PAES_RS11825
subclass of: SO_0000673
so part of: PAES_RS11825
location: complement(41349..43652)
location: region:41349-43652:-1
so has part: feature:41349-43652:-1:exon

WP_012509578.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41349-43652:-1:exon

PAES_RS11830
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11830
old locus tag: Paes_2385
so part of: sequence
location: complement(44168..44959)
location: region:44168-44959:-1
so has part: feature:44168-44959:-1:exon
subclass of: SO_0000010

position:44168:-1
position: 44168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44959:-1
position: 44959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44168-44959:-1:exon

PAES_RS11830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11830
old locus tag: Paes_2385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012509585.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: formylglycine-generating enzyme family protein
translation: MKKVKSLLTVLLLTTTVTSQLILTQMAQAADYTNSIGMEFVKISAGCFNMGRDPNFEDGSDDELPRHRVCITKPFYIGKTEVTQAQWVAVMGSNPSNFKGRNNPVETVSWNDVQTFIRRLNQKEGGNKYRLPTEAEWEYAARAGSSSTYHFGDDKGMVGQYGWYLDNSSERTHPVAQKRPNQWGLYDMHGNVWEWVQDWYDENYYRNSPMNDPKGPSSGRARVHRGGSWYVAAGNLRSACRSRLIFSPGSRYDDLGFRLVRQP
SIO_010081: PAES_RS11830
subclass of: SO_0000673
so part of: PAES_RS11830
location: complement(44168..44959)
location: region:44168-44959:-1
so has part: feature:44168-44959:-1:exon

WP_012509580.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44168-44959:-1:exon

PAES_RS11835
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11835
old locus tag: Paes_2386
so part of: sequence
location: complement(45121..45417)
location: region:45121-45417:-1
so has part: feature:45121-45417:-1:exon
subclass of: SO_0000010

position:45121:-1
position: 45121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45417:-1
position: 45417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45121-45417:-1:exon

PAES_RS11835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11835
old locus tag: Paes_2386
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMKKMSVATCVAVGLLLSGQVFACGIQGTAVNSDGSKINGSGVISTSWNSKKAYPKNGSYSLDLGSSVCGEKITVYLDGNQGQRVTVKGWTTVNFVRP
SIO_010081: PAES_RS11835
subclass of: SO_0000673
so part of: PAES_RS11835
location: complement(45121..45417)
location: region:45121-45417:-1
so has part: feature:45121-45417:-1:exon

WP_012509581.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45121-45417:-1:exon

PAES_RS11840
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11840
old locus tag: Paes_2387
so part of: sequence
location: complement(45728..46741)
location: region:45728-46741:-1
so has part: feature:45728-46741:-1:exon
subclass of: SO_0000010

position:45728:-1
position: 45728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46741:-1
position: 46741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45728-46741:-1:exon

PAES_RS11840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11840
old locus tag: Paes_2387
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005223264.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA-directed DNA polymerase
translation: MKRVGLLFERVVAFENLLHATRQAARGKKSQLRVAHFLFHQEKECLRLQTELKQGIWQPSGFRVFEIREPKPRRISAADFQDRVVQHALCNILGPLCERRLIFDTWACRRGKGSHLAMKRAQAFSRRFPYFLKCDIRRYFDSVDHTILKRLLWRLIKDKPVLNLLDRIIDHPLPGALPGKGLPIGNLTSQHFANLYLGELDHQLKDRMGVKAYLRYMDDMLIFADDKSRLHELVTGIEDFVKQHLQLSLRPSATLVAPVSEGVPFLGFRIFPGLVRVNGQALRRFRHRLRLHEKAYQTGKMDVESLTASVQSMIAHLQHADTHRLRQSLLSSSCALG
SIO_010081: PAES_RS11840
subclass of: SO_0000673
so part of: PAES_RS11840
location: complement(45728..46741)
location: region:45728-46741:-1
so has part: feature:45728-46741:-1:exon

WP_012509582.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45728-46741:-1:exon

PAES_RS11845
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
gene: avd
locus tag: PAES_RS11845
old locus tag: Paes_2388
so part of: sequence
location: complement(46738..47100)
location: region:46738-47100:-1
so has part: feature:46738-47100:-1:exon
subclass of: SO_0000010

position:46738:-1
position: 46738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47100:-1
position: 47100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46738-47100:-1:exon

PAES_RS11845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
gene: avd
locus tag: PAES_RS11845
old locus tag: Paes_2388
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005223263.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diversity-generating retroelement protein Avd
translation: MMMGYQRIDNNRDLPVFVKWLDFLEWLLPVTERFPKRVRFTFSDRINQLALDVVEDLIEARYTKEKQAHLRRANLRLEKLRVLLRLSQRMHFLDYKRFEYAMKYINEVGKMLGGWLRQQQ
SIO_010081: PAES_RS11845
subclass of: SO_0000673
so part of: PAES_RS11845
location: complement(46738..47100)
location: region:46738-47100:-1
so has part: feature:46738-47100:-1:exon

WP_012509583.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46738-47100:-1:exon

PAES_RS12180
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS12180
old locus tag: Paes_2389
so part of: sequence
location: complement(47072..47551)
location: region:47072-47551:-1
so has part: feature:47072-47551:-1:exon
subclass of: SO_0000010

position:47072:-1
position: 47072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47551:-1
position: 47551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47072-47551:-1:exon

PAES_RS12180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS12180
old locus tag: Paes_2389
inference: COORDINATES: protein motif:HMM:NF012779.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HRDC domain-containing protein
translation: MLIRIVTLRFSAALDGFDDSPLAEFIKDKSVLSLREHFFIRNETPYLAVVVIFEPVLEMLSPKAGTPRRRDESWRALLGDADMPLFDSLRSWRGERCKKEGIPPYVICNNKELAKITAARPQSLSGLMQIEGFGKAKAEKYGEEILAILKHDDGIPTDR
SIO_010081: PAES_RS12180
subclass of: SO_0000673
so part of: PAES_RS12180
location: complement(47072..47551)
location: region:47072-47551:-1
so has part: feature:47072-47551:-1:exon

WP_012509584.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47072-47551:-1:exon

PAES_RS11855
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11855
old locus tag: Paes_2390
so part of: sequence
location: complement(47801..48703)
location: region:47801-48703:-1
so has part: feature:47801-48703:-1:exon
subclass of: SO_0000010

position:47801:-1
position: 47801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48703:-1
position: 48703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47801-48703:-1:exon

PAES_RS11855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11855
old locus tag: Paes_2390
inference: COORDINATES: protein motif:HMM:NF015722.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: formylglycine-generating enzyme family protein
translation: MKKLHFLMLIVWFAAALFSEAVQAADYTNSIGMKFKNIPPGSFYMGSCKLSEADKEANEKRKFMGMAPKSAACSSGGPTDNSAQDDETPQHKVRISKGFQIGVYEVTLGQFKQFIASAGRDDLLTDDFMTRNSRGDNAAVTHVSWNDAQAFIRWLNQKEGGSAYRLPTEAEWEYAARAGTTTRYSWGNSESQAGEYAWYDKNAYDVGRSYAHGVGIKMPNPWGLYDMHGNVWEWVQDWYGENYYRNSPMNDPKGPSSGRYRVNRGGGWDYVARNLRSANRGNNSPGSRDDVLGFRLVRQP
SIO_010081: PAES_RS11855
subclass of: SO_0000673
so part of: PAES_RS11855
location: complement(47801..48703)
location: region:47801-48703:-1
so has part: feature:47801-48703:-1:exon

WP_244148052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47801-48703:-1:exon

PAES_RS11865
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11865
old locus tag: Paes_2392
so part of: sequence
location: complement(49386..49979)
location: region:49386-49979:-1
so has part: feature:49386-49979:-1:exon
subclass of: SO_0000010

position:49386:-1
position: 49386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49979:-1
position: 49979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49386-49979:-1:exon

PAES_RS11865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11865
old locus tag: Paes_2392
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011357593.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MTEENRETGRLIGYARVSTGGQELHSQIDALKKAGVPEKLIFIDKASGAKSERPGLDSCMQELQAGDTLVIWRLDRLGRSLKHLIETVEQLMERGVGFRSISDGGIDTTTASGEMVFNIFATLAQFERRLIQERTQAGLKAARARGRKGGRPKISANDPKVKMAKKLSKNYNISIGEICNTLKISRATYYRFLKIGE
SIO_010081: PAES_RS11865
subclass of: SO_0000673
so part of: PAES_RS11865
location: complement(49386..49979)
location: region:49386-49979:-1
so has part: feature:49386-49979:-1:exon

WP_012509586.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49386-49979:-1:exon

PAES_RS11870
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11870
old locus tag: Paes_2393
so part of: sequence
location: complement(50121..50426)
location: region:50121-50426:-1
so has part: feature:50121-50426:-1:exon
subclass of: SO_0000010

position:50121:-1
position: 50121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50426:-1
position: 50426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50121-50426:-1:exon

PAES_RS11870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11870
old locus tag: Paes_2393
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MELNYEIGDTVKFSDRRAIIVGTSIHPANSPENKMKQIGSPYHPTINPGSSDELKEKAVIKFNDPCMDYQIMFIQSDERFVGLQECKENQLTLVKKSNNRL
SIO_010081: PAES_RS11870
subclass of: SO_0000673
so part of: PAES_RS11870
location: complement(50121..50426)
location: region:50121-50426:-1
so has part: feature:50121-50426:-1:exon

WP_012509587.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50121-50426:-1:exon

PAES_RS11875
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11875
old locus tag: Paes_2394
so part of: sequence
location: complement(50731..51483)
location: region:50731-51483:-1
so has part: feature:50731-51483:-1:exon
subclass of: SO_0000010

position:50731:-1
position: 50731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51483:-1
position: 51483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50731-51483:-1:exon

PAES_RS11875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11875
old locus tag: Paes_2394
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012639699.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GIY-YIG nuclease family protein
translation: MLNRDEAAKPGVYFLSGINPETGRERVYIGEAEVIRNRIKGHMDRDFWKSLVFFVSKDENLTKAHIKYLEGKLIETARSIGRFELENAQASGSHLPESDAADMDVFFSRMEQLLPILGQEFLKPVVNEANKKSSLLFCEIKGLKATGRQTDNGFVVLKGSEAVLSERPSTQKYQYAANLRATLRSDGILEEKSDRLIFASDYEFSSPSAAAAVIHGGQANGLIAWKDVRGVTLKEREEMEVQQAPGGAEE
SIO_010081: PAES_RS11875
subclass of: SO_0000673
so part of: PAES_RS11875
location: complement(50731..51483)
location: region:50731-51483:-1
so has part: feature:50731-51483:-1:exon

WP_244148053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50731-51483:-1:exon

PAES_RS11880
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11880
old locus tag: Paes_2395
pseudo: true
so part of: sequence
location: complement(51610..53222)
location: region:51610-53222:-1
so has part: feature:51610-53222:-1:exon
subclass of: SO_0000010

position:51610:-1
position: 51610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53222:-1
position: 53222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51610-53222:-1:exon

PAES_RS11880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11880
old locus tag: Paes_2395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000134257.1
GO function: GO:0015666 - restriction endodeoxyribonuclease activity [Evidence IEA]; GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO process: GO:0006306 - DNA methylation [Evidence IEA]; GO:0009307 - DNA restriction-modification system [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: type I restriction-modification system subunit M
SIO_010081: PAES_RS11880
subclass of: SO_0000673
so part of: PAES_RS11880
location: complement(51610..53222)
location: region:51610-53222:-1
so has part: feature:51610-53222:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:51610-53222:-1:exon

PAES_RS11885
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11885
old locus tag: Paes_2396
so part of: sequence
location: complement(53219..54352)
location: region:53219-54352:-1
so has part: feature:53219-54352:-1:exon
subclass of: SO_0000010

position:53219:-1
position: 53219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54352:-1
position: 54352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53219-54352:-1:exon

PAES_RS11885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11885
old locus tag: Paes_2396
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011711830.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MNKTASTFANLDDIAKHLRDRLDVKKYVLLFAYNGTGKTRLSMAFKDLGKATVDGDDGNEEITRDTLYFNAFTEDLFTWDNDLDSDEERVLLMNTDSQFFSGLQELEMENRIRPLLRRYADFDFYIEYQKGTVNFIREDSFDEGTETIENIKISRGEENIFIWCFFLAVVQLAVDEQEAYNWVKYIYIDDPISSLDDNNAIAVASHLAQLLMKGNGKIRTVISSHHALFFNVMCNELGKAARYFLSKEANGYILTDTGDTPRFHHVALLKQLHEVAESGEIYTYHFNILRSILEKTATFHGFRNFSACIRQDNDDPDGILHARLVNVLSHGNYSLYEPQEMLPENKDYFRKILRDFMNNYRFNPELFPERNQENVKA
SIO_010081: PAES_RS11885
subclass of: SO_0000673
so part of: PAES_RS11885
location: complement(53219..54352)
location: region:53219-54352:-1
so has part: feature:53219-54352:-1:exon

WP_012509589.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53219-54352:-1:exon

PAES_RS12960
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS12960
pseudo: true
so part of: sequence
location: complement(<54370..54987)
location: region:54370-54987:-1
so has part: feature:54370-54987:-1:exon
subclass of: SO_0000010

position:54370:-1
position: 54370
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:54987:-1
position: 54987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54370-54987:-1:exon

PAES_RS12960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS12960
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015600300.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: restriction endonuclease subunit S
SIO_010081: PAES_RS12960
subclass of: SO_0000673
so part of: PAES_RS12960
location: complement(<54370..54987)
location: region:54370-54987:-1
so has part: feature:54370-54987:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54370-54987:-1:exon

PAES_RS12965
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS12965
pseudo: true
so part of: sequence
location: complement(<55018..55602)
location: region:55018-55602:-1
so has part: feature:55018-55602:-1:exon
subclass of: SO_0000010

position:55018:-1
position: 55018
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:55602:-1
position: 55602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55018-55602:-1:exon

PAES_RS12965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS12965
inference: COORDINATES: protein motif:HMM:NF013579.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: restriction endonuclease subunit S
SIO_010081: PAES_RS12965
subclass of: SO_0000673
so part of: PAES_RS12965
location: complement(<55018..55602)
location: region:55018-55602:-1
so has part: feature:55018-55602:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55018-55602:-1:exon

PAES_RS11895
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11895
old locus tag: Paes_2398
so part of: sequence
location: complement(55595..58642)
location: region:55595-58642:-1
so has part: feature:55595-58642:-1:exon
subclass of: SO_0000010

position:55595:-1
position: 55595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58642:-1
position: 58642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55595-58642:-1:exon

PAES_RS11895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11895
old locus tag: Paes_2398
EC number: 3.1.21.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018405016.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0009035 - type I site-specific deoxyribonuclease activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I restriction endonuclease subunit R
translation: MTLKESDIEQKLIAKLEELKYTYRSDIRDKVTLEQNFREKFEALNRVHLTDAEFARLRDEIINADVFQAAKTLREYGHLQREDGTPLDYMLVNIRDWCKNDFEVINQLRINTDNSHHRYDVILLINGLPVVQIELKTIGINPRRAMEQIVDYKNDPGNGYTNTLLCFMQLFIVSNRSNTYYFANNHSQHFAFNADERFLPIYQLASEDNIKITHLDDFADIFFAKCTLGQLISRYMVLVVSEQKLMIMRPYQIYAVKAIVDCIHQNRGNGYIWHTTGSGKTLTSFKASTLLKDNPDIEKCLFVVDRKDLDRQTREEFNKFQEGCVEENTNTETLVRRLLSEDYADKVIVTTIQKLGLALDENSRRNQQHKEKGKLTYKERLEPLRDKRIVFIFDECHRSQFGENHRAIKTFFPKAQLFGFTGTPIFQDNASYKKIDGTVGSYRTTKDIFEKELHAYTITHAIDDRNVLRFHIDYFKPETAQTRAEEAGKVKKQNKIKSGEAVTQQAVVEAILDKHNAATNQRRFNALLATASINHAIDYYELFKELQAEHQEQDPTFKPLNIACVFSPPAEGNKDIKQLQEDLPQEKIDNQQDPEKKKSALKAIIADYNKNYGTNHNINEFDLYYQDVQKRIKDQKYSNRDYPHTNKIDITIVVDMLLTGFDSQYLNTLYVDKNLKHHGLIQAFSRTNRILNDTKPYGNILDFRGQQTAVDNAIALFSGEDNSRAREIWLVDPAPEMVKKLGSAVTELQTFMETQGLPCTPEAVANLKGDSARAEFINRFKEVQRFKTQLDQYTDLDEEQQQAIEQILPEEQARGFKGAYLETAQRLKAQQGKGGVEAGDEQASIDQLDFEFVLFSSALIDYDYIMGLIARYSQNKPGKQNMSREQLVNMLSASSNLMDERQDIIDYINSLQAGEGLSEEAIRDGYQVFKAQKADSELSSMADKHGVETESLKTFVEAILDRMIFDGEQLSDLFEPLELGWKARSKAELALMEDLVPFLKKQAQGREISGLAAYE
SIO_010081: PAES_RS11895
subclass of: SO_0000673
so part of: PAES_RS11895
location: complement(55595..58642)
location: region:55595-58642:-1
so has part: feature:55595-58642:-1:exon

WP_012509591.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55595-58642:-1:exon

PAES_RS11900
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11900
old locus tag: Paes_2399
so part of: sequence
location: 59144..59344
location: region:59144-59344:1
so has part: feature:59144-59344:1:exon
subclass of: SO_0000010

position:59144:1
position: 59144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59344:1
position: 59344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59144-59344:1:exon

PAES_RS11900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11900
old locus tag: Paes_2399
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKREFRHGSIHVRLEEKIDKKGYSTFNVYLNNERVKDCKITLPEEEVDDYFVQLKKSIIDNLERL
SIO_010081: PAES_RS11900
subclass of: SO_0000673
so part of: PAES_RS11900
location: 59144..59344
location: region:59144-59344:1
so has part: feature:59144-59344:1:exon

WP_012509592.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59144-59344:1:exon

PAES_RS12185
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS12185
old locus tag: Paes_2400
so part of: sequence
location: complement(59409..61358)
location: region:59409-61358:-1
so has part: feature:59409-61358:-1:exon
subclass of: SO_0000010

position:59409:-1
position: 59409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61358:-1
position: 61358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59409-61358:-1:exon

PAES_RS12185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS12185
old locus tag: Paes_2400
inference: COORDINATES: protein motif:HMM:NF024816.2
GO function: GO:0005515 - protein binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MNWKWNHIRIKGDNNLVLQDADGNTTAIAITAFIEQFTKEKDDRIRLLDGWLSDKEKIERFAEAERIRLQKELLILQEEKVALEEQVKTLLQEFSDKDITATDSLYQNAFALFMDGKVDDALGVLDEVIFEAREKQLQEERTKQAETRILKAELLQMKFDFKGASEQYDRALAIDASWGIHMKTAAFHWFLNDFSKAYTFYRQALALADTSAEKAMTLNNLANLQSDRNDYESALKGYQEALEIYRELARTNQATYLPYVATTLNNLAVLQRGINDYESALKGYQEALEIRRELARTNRATYLPDVATTLNNLANLQRGINDYESALKGYQEALEIYRELARTNRATYLPDVAMTLNNMAVLQSDRNDYESALKGYQEALEIRRELARTNRATYLPDVATTLNNLANLQRGINDYESALKGYQEALEIRRELARTNQATYLPYVATTLNNLAVLQRGINDYESALKGYQEALEIRRELARTNRATYLPDVATTLNNLAVLQRGINDYESALKGYQEALEIRRELARTNRATYLPDVATTLNNLAVLQSDRNDYESALKGYQEALEIYRELARTNQATYLPDVALTSINLGIFYQELLPNCDKSLEYTKDALRIVLPLEKKIPYLRRYVDIAIAVVRNWDLDPEVFVQVL
SIO_010081: PAES_RS12185
subclass of: SO_0000673
so part of: PAES_RS12185
location: complement(59409..61358)
location: region:59409-61358:-1
so has part: feature:59409-61358:-1:exon

WP_012509593.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59409-61358:-1:exon

PAES_RS11910
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11910
old locus tag: Paes_2401
so part of: sequence
location: complement(61380..61679)
location: region:61380-61679:-1
so has part: feature:61380-61679:-1:exon
subclass of: SO_0000010

position:61380:-1
position: 61380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61679:-1
position: 61679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61380-61679:-1:exon

PAES_RS11910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11910
old locus tag: Paes_2401
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTFLLKLFVMLLIFIAIWFLNPVLQDSIDQWPEWLGDTNMQFLLSFIAALVLAFNPVTARVVNRVIIKGDDNMVLQGTDGSGNNDASINGSRNRVKQE
SIO_010081: PAES_RS11910
subclass of: SO_0000673
so part of: PAES_RS11910
location: complement(61380..61679)
location: region:61380-61679:-1
so has part: feature:61380-61679:-1:exon

WP_150084577.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61380-61679:-1:exon

PAES_RS11915
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11915
old locus tag: Paes_2402
so part of: sequence
location: complement(61728..62444)
location: region:61728-62444:-1
so has part: feature:61728-62444:-1:exon
subclass of: SO_0000010

position:61728:-1
position: 61728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62444:-1
position: 62444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61728-62444:-1:exon

PAES_RS11915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11915
old locus tag: Paes_2402
inference: COORDINATES: protein motif:HMM:NF023168.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding protein
translation: MRPAEYTPEEIIKAGKELQASGRNITGFALRKQVGGGYPARLKQVWDEYVSSQDEQQNESVAELPVEVAETVADMTKQLTERIHSFAVELNDKAVRVADRRVADVTRRAEEQRQQADRELADASETVEELEARLEKAVRDAEEQGSALTELKNAYQKQAVELAQAKERLEAAGQKAKDAEKELQEQKVVVKEAVSARDAAREEAARLSGQVETLQAQVREMMVAFGGQKSGRTDRNIT
SIO_010081: PAES_RS11915
subclass of: SO_0000673
so part of: PAES_RS11915
location: complement(61728..62444)
location: region:61728-62444:-1
so has part: feature:61728-62444:-1:exon

WP_012509595.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61728-62444:-1:exon

PAES_RS11920
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11920
old locus tag: Paes_2403
so part of: sequence
location: 63095..63316
location: region:63095-63316:1
so has part: feature:63095-63316:1:exon
subclass of: SO_0000010

position:63095:1
position: 63095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63316:1
position: 63316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63095-63316:1:exon

PAES_RS11920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11920
old locus tag: Paes_2403
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005321784.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraY domain-containing protein
translation: MKKQINIRLPEEVDERLQMLAETTGRTKTFYAEQAILKFIGEMESYYQAETDHISYTSTRSKETGRHSGEQTA
SIO_010081: PAES_RS11920
subclass of: SO_0000673
so part of: PAES_RS11920
location: 63095..63316
location: region:63095-63316:1
so has part: feature:63095-63316:1:exon

WP_012509596.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63095-63316:1:exon

PAES_RS11925
type: Gene
subclass of: SO_0000704
RO_0002162: 290512
locus tag: PAES_RS11925
old locus tag: Paes_2404
so part of: sequence
location: 63297..64160
location: region:63297-64160:1
so has part: feature:63297-64160:1:exon
subclass of: SO_0000010

position:63297:1
position: 63297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64160:1
position: 64160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63297-64160:1:exon

PAES_RS11925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 290512
locus tag: PAES_RS11925
old locus tag: Paes_2404
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018417332.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication protein RepA
translation: MANRQLERIFQEAMEIEAESAKEAGTISYMARSMVMATLPHRAVKGSEFVRKNGAYTLSLLSPSNVGLPYGSLPRLLISWVTTEAVRTKERELILGDTLSEFMRELDIVPTGGRWGSITRLKNQMKRLFASSVRATFDDGDSFAVGSVNIVDAANLWWDPKDPKQTTMWKSSLLLGEKFFREIIDSPVPIDMRALKALRQSPMALDIYTFLTYRMSYLSKPTVIPWESLQAQMGAEFSPTSEGARNFKKKFLMHLKRVKLIYNELDVNDQKAGLLLKPSRTHVLKLK
SIO_010081: PAES_RS11925
subclass of: SO_0000673
so part of: PAES_RS11925
location: 63297..64160
location: region:63297-64160:1
so has part: feature:63297-64160:1:exon

WP_150084579.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63297-64160:1:exon