Kluyveromyces lactis mitochondrion, complete genome.
type: Entry
definition: Kluyveromyces lactis mitochondrion, complete genome.
sequence version: NC_006077.1
sequence date: 2023-04-03
sequence: sequence
division: PLN
label: NC_006077.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: mitochondrion Kluyveromyces lactis
organism: Kluyveromyces lactis
taxonomy: Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Kluyveromyces.
reference: 1
references: 15691736
reference: 2
reference: 3
comment: PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence was derived from AY654900.\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 40291
topology: circular
so has quality: SO_0000988
location: 1..40291
location: region:1-40291:1
RO_0002162: 28985

NC_006077
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: Complete nucleotide sequence of the mitochondrial DNA from Kluyveromyces lactis
author: Zivanovic, Y.
author: Wincker, P.
author: Vacherie, B.
author: Bolotin-Fukuhara, M.
author: Fukuhara, H.
journal: FEMS Yeast Res. 5 (4-5), 315-322 (2005)
pubmed: 15691736

15691736
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
journal: Submitted (12-AUG-2004) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Zivanovic, Y.
author: Fukuhara, H.
author: Winker, P.
author: Vacherie, B.
journal: Submitted (16-JUN-2004) Universite Paris-Sud, CNRS UMR 8621, Institut de Genetique et Microbiologie, Orsay 91405, France

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40291:1
position: 40291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-40291:1:source
so part of: sequence
organism: Kluyveromyces lactis
organelle: mitochondrion
mol type: genomic DNA

28985
type: Taxonomy
SIO_000068: taxonomy

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 28985
note: purine rich region
so part of: sequence
location: 1..1200
location: region:1-1200:1
so has part: feature:1-1200:1:region

position:1200:1
position: 1200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-1200:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 28985
regulatory class: promoter
note: consensus promoter
so part of: sequence
location: 2060..2069
location: region:2060-2069:1
so has part: feature:2060-2069:1:region

position:2060:1
position: 2060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2069:1
position: 2069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2060-2069:1:region

KllafMp01
type: Gene
subclass of: SO_0000704
RO_0002162: 28985
gene: ATP9
locus tag: KllafMp01
so part of: sequence
location: 2233..2397
location: region:2233-2397:1
so has part: feature:2233-2397:1:exon
subclass of: SO_0000010

2914050
type: Gene
SIO_000068: ncbigene

position:2233:1
position: 2233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2397:1
position: 2397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2233-2397:1:exon

KllafMp01
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28985
gene: ATP9
locus tag: KllafMp01
EC number: 7.1.2.2
codon start: 1
transl table: 4
product: ATPase complex subunit 9
translation: MQLVLAAKYIGAGISTIGLLGAGIGIAIVFSALIQGVSRNPSLKDTLFPFAILG
SIO_010081: KllafMp01
subclass of: SO_0000673
so part of: KllafMp01
location: 2233..2397
location: region:2233-2397:1
so has part: feature:2233-2397:1:exon

YP_054496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2233-2397:1:exon

KllafMt01
type: Gene
subclass of: SO_0000704
RO_0002162: 28985
gene: trnS2
locus tag: KllafMt01
so part of: sequence
location: complement(5543..5628)
location: region:5543-5628:-1
so has part: feature:5543-5628:-1:exon
subclass of: SO_0000663

2914071
type: Gene
SIO_000068: ncbigene

position:5543:-1
position: 5543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5628:-1
position: 5628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5543-5628:-1:exon

KllafMt01
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28985
gene: trnS2
locus tag: KllafMt01
product: tRNA-Ser
codon recognized: UCA
SIO_010081: KllafMt01
subclass of: SO_0000673
so part of: KllafMt01
location: complement(5543..5628)
location: region:5543-5628:-1
so has part: feature:5543-5628:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5543-5628:-1:exon

KllafMt02
type: Gene
subclass of: SO_0000704
RO_0002162: 28985
gene: trnI
locus tag: KllafMt02
so part of: sequence
location: complement(5642..5714)
location: region:5642-5714:-1
so has part: feature:5642-5714:-1:exon
subclass of: SO_0000663

2914053
type: Gene
SIO_000068: ncbigene

position:5642:-1
position: 5642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5714:-1
position: 5714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5642-5714:-1:exon

KllafMt02
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28985
gene: trnI
locus tag: KllafMt02
product: tRNA-Ile
codon recognized: AUC
SIO_010081: KllafMt02
subclass of: SO_0000673
so part of: KllafMt02
location: complement(5642..5714)
location: region:5642-5714:-1
so has part: feature:5642-5714:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5642-5714:-1:exon

KllafMt03
type: Gene
subclass of: SO_0000704
RO_0002162: 28985
gene: trnA
locus tag: KllafMt03
so part of: sequence
location: complement(5778..5850)
location: region:5778-5850:-1
so has part: feature:5778-5850:-1:exon
subclass of: SO_0000663

2914058
type: Gene
SIO_000068: ncbigene

position:5778:-1
position: 5778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5850:-1
position: 5850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5778-5850:-1:exon

KllafMt03
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28985
gene: trnA
locus tag: KllafMt03
product: tRNA-Ala
codon recognized: GCA
SIO_010081: KllafMt03
subclass of: SO_0000673
so part of: KllafMt03
location: complement(5778..5850)
location: region:5778-5850:-1
so has part: feature:5778-5850:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5778-5850:-1:exon

KllafMt04
type: Gene
subclass of: SO_0000704
RO_0002162: 28985
gene: trnN
locus tag: KllafMt04
so part of: sequence
location: complement(5871..5942)
location: region:5871-5942:-1
so has part: feature:5871-5942:-1:exon
subclass of: SO_0000663

2914059
type: Gene
SIO_000068: ncbigene

position:5871:-1
position: 5871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5942:-1
position: 5942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5871-5942:-1:exon

KllafMt04
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28985
gene: trnN
locus tag: KllafMt04
product: tRNA-Asn
codon recognized: AAC
SIO_010081: KllafMt04
subclass of: SO_0000673
so part of: KllafMt04
location: complement(5871..5942)
location: region:5871-5942:-1
so has part: feature:5871-5942:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5871-5942:-1:exon

KllafMt05
type: Gene
subclass of: SO_0000704
RO_0002162: 28985
gene: trnY
locus tag: KllafMt05
so part of: sequence
location: complement(5951..6035)
location: region:5951-6035:-1
so has part: feature:5951-6035:-1:exon
subclass of: SO_0000663

2914079
type: Gene
SIO_000068: ncbigene

position:5951:-1
position: 5951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6035:-1
position: 6035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5951-6035:-1:exon

KllafMt05
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28985
gene: trnY
locus tag: KllafMt05
product: tRNA-Tyr
codon recognized: UAC
SIO_010081: KllafMt05
subclass of: SO_0000673
so part of: KllafMt05
location: complement(5951..6035)
location: region:5951-6035:-1
so has part: feature:5951-6035:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5951-6035:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 28985
regulatory class: promoter
note: consensus promoter
so part of: sequence
location: complement(6134..6143)
location: region:6134-6143:-1
so has part: feature:6134-6143:-1:region

position:6134:-1
position: 6134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6143:-1
position: 6143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6134-6143:-1:region

KllafMt06
type: Gene
subclass of: SO_0000704
RO_0002162: 28985
gene: trnM
locus tag: KllafMt06
so part of: sequence
location: complement(6768..6840)
location: region:6768-6840:-1
so has part: feature:6768-6840:-1:exon
subclass of: SO_0000663

2914077
type: Gene
SIO_000068: ncbigene

position:6768:-1
position: 6768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6840:-1
position: 6840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6768-6840:-1:exon

KllafMt06
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28985
gene: trnM
locus tag: KllafMt06
product: tRNA-Met
codon recognized: AUG
SIO_010081: KllafMt06
subclass of: SO_0000673
so part of: KllafMt06
location: complement(6768..6840)
location: region:6768-6840:-1
so has part: feature:6768-6840:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6768-6840:-1:exon

KllafMt07
type: Gene
subclass of: SO_0000704
RO_0002162: 28985
gene: trnH
locus tag: KllafMt07
so part of: sequence
location: complement(6993..7063)
location: region:6993-7063:-1
so has part: feature:6993-7063:-1:exon
subclass of: SO_0000663

2914068
type: Gene
SIO_000068: ncbigene

position:6993:-1
position: 6993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7063:-1
position: 7063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6993-7063:-1:exon

KllafMt07
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28985
gene: trnH
locus tag: KllafMt07
product: tRNA-His
codon recognized: CAC
SIO_010081: KllafMt07
subclass of: SO_0000673
so part of: KllafMt07
location: complement(6993..7063)
location: region:6993-7063:-1
so has part: feature:6993-7063:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6993-7063:-1:exon

KllafMt08
type: Gene
subclass of: SO_0000704
RO_0002162: 28985
gene: trnS1
locus tag: KllafMt08
so part of: sequence
location: complement(7097..7177)
location: region:7097-7177:-1
so has part: feature:7097-7177:-1:exon
subclass of: SO_0000663

2914069
type: Gene
SIO_000068: ncbigene

position:7097:-1
position: 7097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7177:-1
position: 7177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7097-7177:-1:exon

KllafMt08
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28985
gene: trnS1
locus tag: KllafMt08
product: tRNA-Ser
codon recognized: AGC
SIO_010081: KllafMt08
subclass of: SO_0000673
so part of: KllafMt08
location: complement(7097..7177)
location: region:7097-7177:-1
so has part: feature:7097-7177:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7097-7177:-1:exon

KllafMt09
type: Gene
subclass of: SO_0000704
RO_0002162: 28985
gene: trnD
locus tag: KllafMt09
so part of: sequence
location: complement(7183..7254)
location: region:7183-7254:-1
so has part: feature:7183-7254:-1:exon
subclass of: SO_0000663

2914078
type: Gene
SIO_000068: ncbigene

position:7183:-1
position: 7183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7254:-1
position: 7254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7183-7254:-1:exon

KllafMt09
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28985
gene: trnD
locus tag: KllafMt09
product: tRNA-Asp
codon recognized: GAC
SIO_010081: KllafMt09
subclass of: SO_0000673
so part of: KllafMt09
location: complement(7183..7254)
location: region:7183-7254:-1
so has part: feature:7183-7254:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7183-7254:-1:exon

KllafMt10
type: Gene
subclass of: SO_0000704
RO_0002162: 28985
gene: trnG
locus tag: KllafMt10
so part of: sequence
location: complement(7576..7647)
location: region:7576-7647:-1
so has part: feature:7576-7647:-1:exon
subclass of: SO_0000663

2914060
type: Gene
SIO_000068: ncbigene

position:7576:-1
position: 7576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7647:-1
position: 7647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7576-7647:-1:exon

KllafMt10
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28985
gene: trnG
locus tag: KllafMt10
product: tRNA-Gly
codon recognized: GGA
SIO_010081: KllafMt10
subclass of: SO_0000673
so part of: KllafMt10
location: complement(7576..7647)
location: region:7576-7647:-1
so has part: feature:7576-7647:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7576-7647:-1:exon

KllafMt11
type: Gene
subclass of: SO_0000704
RO_0002162: 28985
gene: trnR
locus tag: KllafMt11
so part of: sequence
location: complement(7666..7738)
location: region:7666-7738:-1
so has part: feature:7666-7738:-1:exon
subclass of: SO_0000663

2914061
type: Gene
SIO_000068: ncbigene

position:7666:-1
position: 7666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7738:-1
position: 7738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7666-7738:-1:exon

KllafMt11
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28985
gene: trnR
locus tag: KllafMt11
product: tRNA-Arg
codon recognized: AGA
SIO_010081: KllafMt11
subclass of: SO_0000673
so part of: KllafMt11
location: complement(7666..7738)
location: region:7666-7738:-1
so has part: feature:7666-7738:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7666-7738:-1:exon

KllafMt12
type: Gene
subclass of: SO_0000704
RO_0002162: 28985
gene: trnK
locus tag: KllafMt12
so part of: sequence
location: complement(7878..7949)
location: region:7878-7949:-1
so has part: feature:7878-7949:-1:exon
subclass of: SO_0000663

2914054
type: Gene
SIO_000068: ncbigene

position:7878:-1
position: 7878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7949:-1
position: 7949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7878-7949:-1:exon

KllafMt12
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28985
gene: trnK
locus tag: KllafMt12
product: tRNA-Lys
codon recognized: AAA
SIO_010081: KllafMt12
subclass of: SO_0000673
so part of: KllafMt12
location: complement(7878..7949)
location: region:7878-7949:-1
so has part: feature:7878-7949:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7878-7949:-1:exon

KllafMt13
type: Gene
subclass of: SO_0000704
RO_0002162: 28985
gene: trnQ
locus tag: KllafMt13
so part of: sequence
location: complement(8068..8140)
location: region:8068-8140:-1
so has part: feature:8068-8140:-1:exon
subclass of: SO_0000663

2914055
type: Gene
SIO_000068: ncbigene

position:8068:-1
position: 8068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8140:-1
position: 8140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8068-8140:-1:exon

KllafMt13
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28985
gene: trnQ
locus tag: KllafMt13
product: tRNA-Gln
codon recognized: CAA
SIO_010081: KllafMt13
subclass of: SO_0000673
so part of: KllafMt13
location: complement(8068..8140)
location: region:8068-8140:-1
so has part: feature:8068-8140:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8068-8140:-1:exon

KllafMt14
type: Gene
subclass of: SO_0000704
RO_0002162: 28985
gene: trnL
locus tag: KllafMt14
so part of: sequence
location: complement(8156..8237)
location: region:8156-8237:-1
so has part: feature:8156-8237:-1:exon
subclass of: SO_0000663

2914064
type: Gene
SIO_000068: ncbigene

position:8156:-1
position: 8156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8237:-1
position: 8237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8156-8237:-1:exon

KllafMt14
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28985
gene: trnL
locus tag: KllafMt14
product: tRNA-Leu
codon recognized: UUA
SIO_010081: KllafMt14
subclass of: SO_0000673
so part of: KllafMt14
location: complement(8156..8237)
location: region:8156-8237:-1
so has part: feature:8156-8237:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8156-8237:-1:exon

KllafMt15
type: Gene
subclass of: SO_0000704
RO_0002162: 28985
gene: trnF
locus tag: KllafMt15
so part of: sequence
location: complement(8243..8314)
location: region:8243-8314:-1
so has part: feature:8243-8314:-1:exon
subclass of: SO_0000663

2914065
type: Gene
SIO_000068: ncbigene

position:8243:-1
position: 8243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8314:-1
position: 8314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8243-8314:-1:exon

KllafMt15
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28985
gene: trnF
locus tag: KllafMt15
product: tRNA-Phe
codon recognized: UUC
SIO_010081: KllafMt15
subclass of: SO_0000673
so part of: KllafMt15
location: complement(8243..8314)
location: region:8243-8314:-1
so has part: feature:8243-8314:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8243-8314:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 28985
regulatory class: promoter
note: consensus promoter
so part of: sequence
location: complement(8323..8332)
location: region:8323-8332:-1
so has part: feature:8323-8332:-1:region

position:8323:-1
position: 8323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8332:-1
position: 8332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8323-8332:-1:region

KllafMr01
type: Gene
subclass of: SO_0000704
RO_0002162: 28985
gene: lrRNA
locus tag: KllafMr01
so part of: sequence
location: complement(9217..12560)
location: region:9217-12560:-1
so has part: feature:9217-12560:-1:exon
subclass of: SO_0000573

2914062
type: Gene
SIO_000068: ncbigene

position:9217:-1
position: 9217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12560:-1
position: 12560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9217-12560:-1:exon

KllafMr01
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 28985
gene: lrRNA
locus tag: KllafMr01
product: large subunit ribosomal RNA
SIO_010081: KllafMr01
subclass of: SO_0000673
so part of: KllafMr01
location: complement(join(9217..9690,10107..12560))
location: region:9217-12560:-1
so has part: feature:10107-12560:-1:exon
so has part: feature:9217-9690:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10107-12560:-1:exon

position:10107:-1
position: 10107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9217-9690:-1:exon

position:9690:-1
position: 9690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KllafMr01
type: Intron
subclass of: SO_0000188
RO_0002162: 28985
gene: lrRNA
locus tag: KllafMr01
note: similar to the omega intron of Saccharomyces cerevisiae, but contains no ORF
SIO_010081: KllafMr01
subclass of: SO_0000673
so part of: KllafMr01
location: complement(9690..10107)
location: region:9690-10107:-1
so has part: feature:9690-10107:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9690-10107:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 28985
regulatory class: promoter
note: consensus promoter
so part of: sequence
location: complement(12560..12569)
location: region:12560-12569:-1
so has part: feature:12560-12569:-1:region

position:12569:-1
position: 12569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12560-12569:-1:region

KllafMt16
type: Gene
subclass of: SO_0000704
RO_0002162: 28985
gene: trnP
locus tag: KllafMt16
so part of: sequence
location: complement(14284..14355)
location: region:14284-14355:-1
so has part: feature:14284-14355:-1:exon
subclass of: SO_0000663

2914063
type: Gene
SIO_000068: ncbigene

position:14284:-1
position: 14284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14355:-1
position: 14355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14284-14355:-1:exon

KllafMt16
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28985
gene: trnP
locus tag: KllafMt16
product: tRNA-Pro
codon recognized: CCU
SIO_010081: KllafMt16
subclass of: SO_0000673
so part of: KllafMt16
location: complement(14284..14355)
location: region:14284-14355:-1
so has part: feature:14284-14355:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14284-14355:-1:exon

KllafMs01
type: Gene
subclass of: SO_0000704
RO_0002162: 28985
gene: RPM1
locus tag: KllafMs01
so part of: sequence
location: complement(<14356..>14544)
location: region:14356-14544:-1
so has part: feature:14356-14544:-1:exon

2914066
type: Gene
SIO_000068: ncbigene

position:14356:-1
position: 14356
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:14544:-1
position: 14544
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14356-14544:-1:exon

KllafMs01
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 28985
gene: RPM1
locus tag: KllafMs01
product: ribonuclease P RNA
note: AT rich region; consensus signatures; tRNA 5' end processing
SIO_010081: KllafMs01
so part of: KllafMs01
location: complement(<14356..>14544)
location: region:14356-14544:-1
so has part: feature:14356-14544:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14356-14544:-1:exon

KllafMt17
type: Gene
subclass of: SO_0000704
RO_0002162: 28985
gene: trnfM
locus tag: KllafMt17
so part of: sequence
location: complement(14545..14616)
location: region:14545-14616:-1
so has part: feature:14545-14616:-1:exon
subclass of: SO_0000663

2914067
type: Gene
SIO_000068: ncbigene

position:14545:-1
position: 14545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14616:-1
position: 14616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14545-14616:-1:exon

KllafMt17
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28985
gene: trnfM
locus tag: KllafMt17
product: tRNA-Met
codon recognized: AUG
SIO_010081: KllafMt17
subclass of: SO_0000673
so part of: KllafMt17
location: complement(14545..14616)
location: region:14545-14616:-1
so has part: feature:14545-14616:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14545-14616:-1:exon

KllafMt18
type: Gene
subclass of: SO_0000704
RO_0002162: 28985
gene: trnC
locus tag: KllafMt18
so part of: sequence
location: complement(14690..14762)
location: region:14690-14762:-1
so has part: feature:14690-14762:-1:exon
subclass of: SO_0000663

2914056
type: Gene
SIO_000068: ncbigene

position:14690:-1
position: 14690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14762:-1
position: 14762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14690-14762:-1:exon

KllafMt18
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28985
gene: trnC
locus tag: KllafMt18
product: tRNA-Cys
codon recognized: UGC
SIO_010081: KllafMt18
subclass of: SO_0000673
so part of: KllafMt18
location: complement(14690..14762)
location: region:14690-14762:-1
so has part: feature:14690-14762:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14690-14762:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 28985
regulatory class: promoter
note: consensus promoter
so part of: sequence
location: complement(14991..15000)
location: region:14991-15000:-1
so has part: feature:14991-15000:-1:region

position:14991:-1
position: 14991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15000:-1
position: 15000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14991-15000:-1:region

KllafMt19
type: Gene
subclass of: SO_0000704
RO_0002162: 28985
gene: trnW
locus tag: KllafMt19
so part of: sequence
location: complement(15589..15659)
location: region:15589-15659:-1
so has part: feature:15589-15659:-1:exon
subclass of: SO_0000663

2914057
type: Gene
SIO_000068: ncbigene

position:15589:-1
position: 15589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15659:-1
position: 15659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15589-15659:-1:exon

KllafMt19
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28985
gene: trnW
locus tag: KllafMt19
product: tRNA-Trp
codon recognized: UGA
SIO_010081: KllafMt19
subclass of: SO_0000673
so part of: KllafMt19
location: complement(15589..15659)
location: region:15589-15659:-1
so has part: feature:15589-15659:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15589-15659:-1:exon

KllafMr02
type: Gene
subclass of: SO_0000704
RO_0002162: 28985
gene: srRNA
locus tag: KllafMr02
so part of: sequence
location: complement(<15864..17601)
location: region:15864-17601:-1
so has part: feature:15864-17601:-1:exon
subclass of: SO_0000573

2914049
type: Gene
SIO_000068: ncbigene

position:15864:-1
position: 15864
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:17601:-1
position: 17601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15864-17601:-1:exon

KllafMr02
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 28985
gene: srRNA
locus tag: KllafMr02
product: small subunit ribosomal RNA
SIO_010081: KllafMr02
subclass of: SO_0000673
so part of: KllafMr02
location: complement(<15864..17601)
location: region:15864-17601:-1
so has part: feature:15864-17601:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15864-17601:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 28985
regulatory class: promoter
note: consensus promoter
so part of: sequence
location: complement(17601..17610)
location: region:17601-17610:-1
so has part: feature:17601-17610:-1:region

position:17610:-1
position: 17610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17601-17610:-1:region

KllafMp02
type: Gene
subclass of: SO_0000704
RO_0002162: 28985
gene: CYTB
locus tag: KllafMp02
so part of: sequence
location: complement(20667..21827)
location: region:20667-21827:-1
so has part: feature:20667-21827:-1:exon
subclass of: SO_0000010

2914051
type: Gene
SIO_000068: ncbigene

position:20667:-1
position: 20667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21827:-1
position: 21827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20667-21827:-1:exon

KllafMp02
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28985
gene: CYTB
locus tag: KllafMp02
EC number: 7.1.1.8
codon start: 1
transl table: 4
product: apocytochrome b
translation: MSFRKSNIYLNLLNSYMIDSPQPSSINYWWNLGSLLGLCLVIQICTGIFLAMHYSSNIELAFSAVEHIMRDVQGGWFIRYAHANGASFFFICMYIHIGKGLYYGSYRAPRTLVWNVGVIIFVLTMAAAFLGYCCVYGQMSHWGATVITNLFSAIPFIGNDIVSWLWGGFSVSNPTIQRFFAFHYLVPFIIAAFVIMHFMALHTHGSSNPLGVTGNLDRLPMHGYFIFKDLITVFVFLFFFSLFVFFSPNTMGHPDNYIPGNPLVTPASIVPEWYLLPFYAILRSVPDKLLGVLAMFGAILILLVLPITDRSVIRGNAFKVFSKFFFFLFIANFVLLGHLGECHVEPPFVVMGQIATVIYFAYFLVIVPVVSTIENVLFYVGRKNAK
SIO_010081: KllafMp02
subclass of: SO_0000673
so part of: KllafMp02
location: complement(20667..21827)
location: region:20667-21827:-1
so has part: feature:20667-21827:-1:exon

YP_054497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20667-21827:-1:exon

KllafMt20
type: Gene
subclass of: SO_0000704
RO_0002162: 28985
gene: trnE
locus tag: KllafMt20
so part of: sequence
location: complement(22368..22439)
location: region:22368-22439:-1
so has part: feature:22368-22439:-1:exon
subclass of: SO_0000663

2914072
type: Gene
SIO_000068: ncbigene

position:22368:-1
position: 22368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22439:-1
position: 22439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22368-22439:-1:exon

KllafMt20
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28985
gene: trnE
locus tag: KllafMt20
product: tRNA-Glu
codon recognized: GAA
SIO_010081: KllafMt20
subclass of: SO_0000673
so part of: KllafMt20
location: complement(22368..22439)
location: region:22368-22439:-1
so has part: feature:22368-22439:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22368-22439:-1:exon

KllafMt21
type: Gene
subclass of: SO_0000704
RO_0002162: 28985
gene: trnT
locus tag: KllafMt21
so part of: sequence
location: complement(22440..22512)
location: region:22440-22512:-1
so has part: feature:22440-22512:-1:exon
subclass of: SO_0000663

2914073
type: Gene
SIO_000068: ncbigene

position:22440:-1
position: 22440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22512:-1
position: 22512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22440-22512:-1:exon

KllafMt21
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28985
gene: trnT
locus tag: KllafMt21
product: tRNA-Thr
codon recognized: ACA
SIO_010081: KllafMt21
subclass of: SO_0000673
so part of: KllafMt21
location: complement(22440..22512)
location: region:22440-22512:-1
so has part: feature:22440-22512:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22440-22512:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 28985
regulatory class: promoter
note: one-mismatch consensus promoter
so part of: sequence
location: complement(22518..22528)
location: region:22518-22528:-1
so has part: feature:22518-22528:-1:region

position:22518:-1
position: 22518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22528:-1
position: 22528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22518-22528:-1:region

KllafMp03
type: Gene
subclass of: SO_0000704
RO_0002162: 28985
gene: ATP6
locus tag: KllafMp03
so part of: sequence
location: complement(25792..26562)
location: region:25792-26562:-1
so has part: feature:25792-26562:-1:exon
subclass of: SO_0000010

2914052
type: Gene
SIO_000068: ncbigene

position:25792:-1
position: 25792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26562:-1
position: 26562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25792-26562:-1:exon

KllafMp03
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28985
gene: ATP6
locus tag: KllafMp03
EC number: 7.1.2.2
codon start: 1
transl table: 4
product: ATPase complex subunit 6
translation: MLNLFITSPLDQFEIRVLMGFTSPLLDFSSLNFTTFSLYTIIVLFTVLGLNLLTTNNNKIIGSKWFVSQEAIYDTILNMVKGQIGGKLWGYYFPLVYTFFFFIFVSNLISMIPYSFALSAHLIFIVSLSSVIWLGATIIGLTKHGLVFFSLFVPGGTPLPLVPLLVLIELLSYFARAISLGLRLSSNVLSGHLLLIILGGLLFNLMSMSIITFVFGLIPGVGLLAIVVLEFAISVIQAYVWSILTSSYLKDVLYLH
SIO_010081: KllafMp03
subclass of: SO_0000673
so part of: KllafMp03
location: complement(25792..26562)
location: region:25792-26562:-1
so has part: feature:25792-26562:-1:exon

YP_054498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25792-26562:-1:exon

KllafMp04
type: Gene
subclass of: SO_0000704
RO_0002162: 28985
gene: ATP8
locus tag: KllafMp04
so part of: sequence
location: complement(26986..27132)
location: region:26986-27132:-1
so has part: feature:26986-27132:-1:exon
subclass of: SO_0000010

2914080
type: Gene
SIO_000068: ncbigene

position:26986:-1
position: 26986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27132:-1
position: 27132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26986-27132:-1:exon

KllafMp04
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28985
gene: ATP8
locus tag: KllafMp04
EC number: 7.1.2.2
codon start: 1
transl table: 4
product: ATPase complex subunit 8
translation: MPQLVPFYFLNQLVYGFALVTILLVLFAQYFLPQILRLYVSRLFISKL
SIO_010081: KllafMp04
subclass of: SO_0000673
so part of: KllafMp04
location: complement(26986..27132)
location: region:26986-27132:-1
so has part: feature:26986-27132:-1:exon

YP_054499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26986-27132:-1:exon

KllafMp05
type: Gene
subclass of: SO_0000704
RO_0002162: 28985
gene: COX1
locus tag: KllafMp05
so part of: sequence
location: complement(27490..33733)
location: region:27490-33733:-1
so has part: feature:27490-33733:-1:exon
subclass of: SO_0000010

2914076
type: Gene
SIO_000068: ncbigene

position:27490:-1
position: 27490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33733:-1
position: 33733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27490-33733:-1:exon

KllafMp05
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28985
gene: COX1
locus tag: KllafMp05
EC number: 7.1.1.9
codon start: 1
transl table: 4
product: cytochrome c oxidase subunit 1
translation: MIERWLYSTNAKDIAVLYFIFAIFCGMAGTAMSLIIRLELAAPGNQVLSGNHQLFNVLVVGHAVLIIFFLVMPALIGGFGNYMLPLLIGASDMSFARLNNISFWCLPPALVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHRLPLFVWSIFITAFLLLLSLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPVLYQHLFWFFGHPEVYILIIPGFGIISHIVSTYSKKPVFGEVSMVYAMASIGLLGFLVWSHHMYIVGLDADTRAYFTSATMIIAIPTGIKIFSWLATIYGGSIRLAVPMLYAIAFLFLFTIGGLTGVALANASLDVAFHDTYYVVGHFHYVLSMGAIFSLFAGYYYWSPQILGLYYNEKLAQIQFWLIFVGANVIFLPMHFLGVNGMPRRIPDYPDAFAGWNYVASIGSIIAVFSLFLFIYILYDQLVNGLENKVNNKSVIYNKGPDFVESNQIFATNKIKSSSIEFLLTSPPAVHTFNTPAVQS
SIO_010081: KllafMp05
subclass of: SO_0000673
so part of: KllafMp05
location: complement(join(27490..27987,29626..29761,31223..31484,33025..33733))
location: region:27490-33733:-1
so has part: feature:33025-33733:-1:exon
so has part: feature:31223-31484:-1:exon
so has part: feature:29626-29761:-1:exon
so has part: feature:27490-27987:-1:exon

YP_054500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33025-33733:-1:exon

position:33025:-1
position: 33025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:31223-31484:-1:exon

position:31223:-1
position: 31223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31484:-1
position: 31484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:29626-29761:-1:exon

position:29626:-1
position: 29626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29761:-1
position: 29761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:27490-27987:-1:exon

position:27987:-1
position: 27987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KllafMp05
type: Exon
subclass of: SO_0000147
RO_0002162: 28985
gene: COX1
locus tag: KllafMp05
number: 4
SIO_010081: KllafMp05
subclass of: SO_0000673
so part of: KllafMp05
location: complement(27493..27987)
location: region:27493-27987:-1
so has part: feature:27493-27987:-1:exon

position:27493:-1
position: 27493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27493-27987:-1:exon

KllafMp05
type: Intron
subclass of: SO_0000188
RO_0002162: 28985
gene: COX1
locus tag: KllafMp05
number: 3
SIO_010081: KllafMp05
subclass of: SO_0000673
so part of: KllafMp05
location: complement(27988..29625)
location: region:27988-29625:-1
so has part: feature:27988-29625:-1:exon

position:27988:-1
position: 27988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29625:-1
position: 29625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27988-29625:-1:exon

KllafMp05
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28985
gene: COX1
locus tag: KllafMp05
note: contains 2 LAGLIDADG motifs; two GC-rich clusters
codon start: 1
transl table: 4
product: COX1 intron 3 ORF
translation: MNIIIIILYISYIYTYPFSNGKYCNLYNPTTFYKINNILYSIKIYNINNNTNNTNNNNPADSSSYESRMRAAGNSNSNSNSNSDSNINNTNNINNTNNIYNINNNINNNNNINNNYINNSIPCGSYPQGRWTAGSEFYKMLFVGLFDSNGNIQINKYKSKYLQFRLIIKLNNNKENINILNNIKHYLKGNININNNYVIWIINDIKNINNLIKLFNKYPLITINKKLQLAFIKSIYYIYKNNRNLAINLYLKDRNNKYNPNLYKYYKDINYTKINYFSPANFHKKFAGININININNNYNHNYINVWFLGFIENKGKFIIRKNNNNSFLFYINDKHLIEFLKNYFNIKNKLIYKNNIYILEVYNKYYINIFIKFFNKYNLQGYKYIEYIKWKKINI
SIO_010081: KllafMp05
subclass of: SO_0000673
so part of: KllafMp05
location: complement(28432..29622)
location: region:28432-29622:-1
so has part: feature:28432-29622:-1:exon

YP_054501.1
type: Protein
SIO_000068: ncbiprotein

position:28432:-1
position: 28432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29622:-1
position: 29622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28432-29622:-1:exon

KllafMp05
type: Exon
subclass of: SO_0000147
RO_0002162: 28985
gene: COX1
locus tag: KllafMp05
number: 3
SIO_010081: KllafMp05
subclass of: SO_0000673
so part of: KllafMp05
location: complement(29625..29761)
location: region:29625-29761:-1
so has part: feature:29625-29761:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29625-29761:-1:exon

KllafMp05
type: Intron
subclass of: SO_0000188
RO_0002162: 28985
gene: COX1
locus tag: KllafMp05
number: 2
SIO_010081: KllafMp05
subclass of: SO_0000673
so part of: KllafMp05
location: complement(29762..31221)
location: region:29762-31221:-1
so has part: feature:29762-31221:-1:exon

position:29762:-1
position: 29762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31221:-1
position: 31221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29762-31221:-1:exon

KllafMp05
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 28985
gene: COX1
locus tag: KllafMp05
note: putative coding region not translated because the genome does not encode trnR
SIO_010081: KllafMp05
subclass of: SO_0000673
so part of: KllafMp05
location: complement(30262..31221)
location: region:30262-31221:-1
so has part: feature:30262-31221:-1:exon

position:30262:-1
position: 30262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30262-31221:-1:exon

KllafMp05
type: Exon
subclass of: SO_0000147
RO_0002162: 28985
gene: COX1
locus tag: KllafMp05
number: 2
SIO_010081: KllafMp05
subclass of: SO_0000673
so part of: KllafMp05
location: complement(31222..31484)
location: region:31222-31484:-1
so has part: feature:31222-31484:-1:exon

position:31222:-1
position: 31222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31222-31484:-1:exon

KllafMp05
type: Intron
subclass of: SO_0000188
RO_0002162: 28985
gene: COX1
locus tag: KllafMp05
number: 1
SIO_010081: KllafMp05
subclass of: SO_0000673
so part of: KllafMp05
location: complement(31485..33024)
location: region:31485-33024:-1
so has part: feature:31485-33024:-1:exon

position:31485:-1
position: 31485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33024:-1
position: 33024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31485-33024:-1:exon

KllafMp05
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 28985
gene: COX1
locus tag: KllafMp05
note: putative coding region not translated because the genome does not encode trnR
SIO_010081: KllafMp05
subclass of: SO_0000673
so part of: KllafMp05
location: complement(32027..33022)
location: region:32027-33022:-1
so has part: feature:32027-33022:-1:exon

position:32027:-1
position: 32027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33022:-1
position: 33022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32027-33022:-1:exon

KllafMp05
type: Exon
subclass of: SO_0000147
RO_0002162: 28985
gene: COX1
locus tag: KllafMp05
number: 1
SIO_010081: KllafMp05
subclass of: SO_0000673
so part of: KllafMp05
location: complement(33025..33733)
location: region:33025-33733:-1
so has part: feature:33025-33733:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33025-33733:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 28985
regulatory class: promoter
note: consensus promoter
so part of: sequence
location: complement(34010..34019)
location: region:34010-34019:-1
so has part: feature:34010-34019:-1:region

position:34010:-1
position: 34010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34019:-1
position: 34019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34010-34019:-1:region

KllafMp06
type: Gene
subclass of: SO_0000704
RO_0002162: 28985
gene: COX2
locus tag: KllafMp06
so part of: sequence
location: complement(34936..35706)
location: region:34936-35706:-1
so has part: feature:34936-35706:-1:exon
subclass of: SO_0000010

2914081
type: Gene
SIO_000068: ncbigene

position:34936:-1
position: 34936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35706:-1
position: 35706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34936-35706:-1:exon

KllafMp06
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28985
gene: COX2
locus tag: KllafMp06
codon start: 1
transl table: 4
product: cytochrome c oxidase subunit 2
translation: MYRLKKIINMFYLLNSIIMNDVPTPYGMYFQDSATPNQEGILELHDNIMFYLFIILGLVSWLLFTIVRTYSKNPIAYKYIKHGQTIEIIWTIFPAVILLIIAFPSFILLYLCDEVISPAMTIKAIGLQWYWKYEYSDFINDNGETVEFESYVIPEDLLEDGQLRLLDTDTSVVVPVDTHIRFVVTAADVIHDFAVPSLGIKIDAAPGRLNQVSALIQREGVFYGQCSEICGQSHSAMPIKIEAVSLPAFLEWLNEQ
SIO_010081: KllafMp06
subclass of: SO_0000673
so part of: KllafMp06
location: complement(34936..35706)
location: region:34936-35706:-1
so has part: feature:34936-35706:-1:exon

YP_054502.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34936-35706:-1:exon

KllafMt22
type: Gene
subclass of: SO_0000704
RO_0002162: 28985
gene: trnV
locus tag: KllafMt22
so part of: sequence
location: complement(35904..35975)
location: region:35904-35975:-1
so has part: feature:35904-35975:-1:exon
subclass of: SO_0000663

2914074
type: Gene
SIO_000068: ncbigene

position:35904:-1
position: 35904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35975:-1
position: 35975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35904-35975:-1:exon

KllafMt22
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 28985
gene: trnV
locus tag: KllafMt22
product: tRNA-Val
codon recognized: GUA
SIO_010081: KllafMt22
subclass of: SO_0000673
so part of: KllafMt22
location: complement(35904..35975)
location: region:35904-35975:-1
so has part: feature:35904-35975:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35904-35975:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 28985
regulatory class: promoter
note: consensus promoter
so part of: sequence
location: complement(36002..36011)
location: region:36002-36011:-1
so has part: feature:36002-36011:-1:region

position:36002:-1
position: 36002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36011:-1
position: 36011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36002-36011:-1:region

KllafMp07
type: Gene
subclass of: SO_0000704
RO_0002162: 28985
gene: VAR1
locus tag: KllafMp07
so part of: sequence
location: complement(36639..37805)
location: region:36639-37805:-1
so has part: feature:36639-37805:-1:exon
subclass of: SO_0000010

2914075
type: Gene
SIO_000068: ncbigene

position:36639:-1
position: 36639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37805:-1
position: 37805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36639-37805:-1:exon

KllafMp07
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28985
gene: VAR1
locus tag: KllafMp07
note: putative start codon due to presence of multiple methionines; similar to Saccharomyces cerevisiae ribosomal small subunit protein; contains a palindromic GC cluster which does not interrupt the open reading frame
codon start: 1
transl table: 4
product: ribosomal small subunit protein
translation: MNINTMNKHTTNLNIIKNINNINNLNSIKELLLLLNNKRLNRSLNKTYIWDYLNELSNKGVKLQHLNNINSWSSQIYKFNKTEEINNTIYDRLVTKLLTKLLVLNINNKIYKLIISKPIFEHSINKVNIKFFYYLSYKNINKNINNNNNLINNIYSNYKFNINSKLINLLNNNINSISNILSLYYNKDVSFEPIQLKYNYMNSDILAKSLKIMNSSSKRSLSMNRIKNLMNNMPKLNDKLISQTYINNINNIMFNKYNNIIKSINNNNNNNPADSSPGNPRGGAAGKLYNIIYENNNINTIPNNILMFKYLVGWSIQLKGRLSNNKSISRSNTMNILNGTFQNYKYIWGNQMVNNYKLNYIPVNHNITNISDVNKNGKYNIKVKLNTI
SIO_010081: KllafMp07
subclass of: SO_0000673
so part of: KllafMp07
location: complement(36639..37805)
location: region:36639-37805:-1
so has part: feature:36639-37805:-1:exon

YP_054503.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36639-37805:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 28985
regulatory class: promoter
note: consensus promoter
so part of: sequence
location: complement(37896..37906)
location: region:37896-37906:-1
so has part: feature:37896-37906:-1:region

position:37896:-1
position: 37896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37906:-1
position: 37906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37896-37906:-1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 28985
regulatory class: promoter
note: consensus promoter
so part of: sequence
location: 38392..38401
location: region:38392-38401:1
so has part: feature:38392-38401:1:region

position:38392:1
position: 38392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38401:1
position: 38401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38392-38401:1:region

KllafMp08
type: Gene
subclass of: SO_0000704
RO_0002162: 28985
gene: COX3
locus tag: KllafMp08
so part of: sequence
location: 38539..39348
location: region:38539-39348:1
so has part: feature:38539-39348:1:exon
subclass of: SO_0000010

2914070
type: Gene
SIO_000068: ncbigene

position:38539:1
position: 38539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39348:1
position: 39348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38539-39348:1:exon

KllafMp08
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28985
gene: COX3
locus tag: KllafMp08
codon start: 1
transl table: 4
product: cytochrome c oxidase subunit 3
translation: MTHLERSRHQQFPFHLVAPSPWPIVVSFALMSLALSLALTMHGYIGHMYLIYLSILTVTLSATLWFRDIIAEATYLGDHTIAVRKGINLGFLLFVVSEILIFAALFWAYFHSAMSPNIELGGVWPPVGIQAVQPTELPLLNTIILLSSGATITYSHHGLVGGNRKNALSGLLITFWLIVIFVTCQYIEYTNATFTITDGVYGSVFYAGTGLHFLHMVMLAAMLGINYWRLRNYHLTATHHVGYETTVLYCHILDIIWLFLYIVFYWWGV
SIO_010081: KllafMp08
subclass of: SO_0000673
so part of: KllafMp08
location: 38539..39348
location: region:38539-39348:1
so has part: feature:38539-39348:1:exon

YP_054504.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38539-39348:1:exon