Campylobacter helveticus strain ATCC 51209 plasmid pHELV-2, complete sequence.
type: Entry
definition: Campylobacter helveticus strain ATCC 51209 plasmid pHELV-2, complete sequence.
sequence version: NZ_CP020480.1
sequence date: 2023-04-23
sequence: sequence
division: CON
label: NZ_CP020480.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN03737972
keyword: RefSeq
source: Campylobacter helveticus
organism: Campylobacter helveticus
taxonomy: Bacteria; Campylobacterota; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP020480.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Newbler v. 2.6\nGenome Coverage :: 1314x\nSequencing Technology :: Sanger dideoxy sequencing; 454; Illumina;\n PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/23/2023 02:43:49\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,026\nCDSs (total) :: 1,972\nGenes (coding) :: 1,947\nCDSs (with protein) :: 1,947\nGenes (RNA) :: 54\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 42\nncRNAs :: 3\nPseudo Genes (total) :: 25\nCDSs (without protein) :: 25\nPseudo Genes (ambiguous residues) :: 0 of 25\nPseudo Genes (frameshifted) :: 8 of 25\nPseudo Genes (incomplete) :: 15 of 25\nPseudo Genes (internal stop) :: 2 of 25\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 34012
topology: circular
so has quality: SO_0000988
location: 1..34012
location: region:1-34012:1
RO_0002162: 28898

NZ_CP020480
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN03737972
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence of Campylobacter helveticus ATCC 51209T
author: Miller, W.G.
author: Yee, E.
author: Bono, J.L.
journal: Unpublished

2
title: Direct Submission
author: Miller, W.G.
author: Yee, E.
author: Bono, J.L.
journal: Submitted (24-MAR-2017) Produce Safety and Microbiology, USDA, ARS, 800 Buchanan St., Albany, CA 94710, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34012:1
position: 34012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-34012:1:source
so part of: sequence
organism: Campylobacter helveticus
mol type: genomic DNA
strain: ATCC 51209
isolation source: feces
host: cat
culture collection: ATCC:51209
type material: type strain of Campylobacter helveticus
plasmid: pHELV-2
country: Switzerland: Berne
collection date: 1992

28898
type: Taxonomy
SIO_000068: taxonomy

CHELV3228_RS10400
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS10400
old locus tag: CHELV3228_b0001
so part of: sequence
location: 1..558
location: region:1-558:1
so has part: feature:1-558:1:exon
subclass of: SO_0000010

63549429
type: Gene
SIO_000068: ncbigene

position:558:1
position: 558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-558:1:exon

CHELV3228_RS10400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS10400
old locus tag: CHELV3228_b0001
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKLFILSDENAKRLKEISTKENKSMSKIVNLLIENYFKDAEVEKSISQSIEKLNFSEDEKSKNHKIIKIKIAEKEYDILKKFALKESLNNVTRYIKYLISLKIYADNSLSNLELKELDKARSEFNMLGKNLNQILKILHSRTSTNEKQNSSIKNLNELLEDINSKQNILYSKINSFIQTNKKRF
SIO_010081: CHELV3228_RS10400
subclass of: SO_0000673
so part of: CHELV3228_RS10400
location: 1..558
location: region:1-558:1
so has part: feature:1-558:1:exon

WP_082200876.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-558:1:exon

CHELV3228_RS09730
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
gene: mobP1
locus tag: CHELV3228_RS09730
old locus tag: CHELV3228_b0002
so part of: sequence
location: 559..2223
location: region:559-2223:1
so has part: feature:559-2223:1:exon
subclass of: SO_0000010

52037824
type: Gene
SIO_000068: ncbigene

position:559:1
position: 559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2223:1
position: 2223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559-2223:1:exon

CHELV3228_RS09730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
gene: mobP1
locus tag: CHELV3228_RS09730
old locus tag: CHELV3228_b0002
inference: COORDINATES: protein motif:HMM:NF041450.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobP1 family relaxase
translation: MCAVIFKRKDEEELRAKKFIDYGKFARKNCYKFIDYHIGSYYTKTAFSKDKNSKIKKESNRFINKNQHIKNTEVLVKITSNSKNQNAIYKHLEYISRNGSVETLVTDLNYCEPEFRDTISGQYHLMGKEYLKYTHSFYEEKIDLSKSKNARKAQRLTFNMVFSLKDYQGIDEFSFDPELVKKATFYTIKKFYPNNFFVLALHTDTNNPHCHICLKIQDENGKRIDIRKADLHKLREEFAKNLNNLGLEATATRKYEKNTEKYISSSLYKDKVVPDFYPNAIKERNDPRFAPNQLKCFEIVDFGNAPYEFMQGNPQSYFITYLTKDFRKVSIWGQDLERIVKENDLKKGDFAKFHKIGRAYKMKSYEKIVKNSLYEINEPIYYSKWDCIVYDMEKKSLSKDKFEKLAQQEVLKPSVKFIKKISKEHNARKPRRPDSSRHYTKEEWAKYHQRRGRKAKRALQTPTSLYKSEFNFDERRGFNNLAPREFDSLRTLPQSSMDFTKREESKNTDLFLSSDAYPKLLNAQSQAYTELRWTASSSSGIRGIENNKENLERE
SIO_010081: CHELV3228_RS09730
subclass of: SO_0000673
so part of: CHELV3228_RS09730
location: 559..2223
location: region:559-2223:1
so has part: feature:559-2223:1:exon

WP_082200877.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:559-2223:1:exon

CHELV3228_RS09735
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS09735
old locus tag: CHELV3228_b0003
so part of: sequence
location: 2227..2682
location: region:2227-2682:1
so has part: feature:2227-2682:1:exon
subclass of: SO_0000010

52037825
type: Gene
SIO_000068: ncbigene

position:2227:1
position: 2227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2682:1
position: 2682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2227-2682:1:exon

CHELV3228_RS09735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS09735
old locus tag: CHELV3228_b0003
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKKIKQYWKRNYKTISSWFQIIAFAVCLLLSSYAFTDPSFEKLTVEQITKNVTCALIFMAISFSLFLFFTYGDKNQKILELLKTYSSSVCVIIIMFYYFVEKYEDHLKTNNDMAEVLSLPYKFFWILTIFMTFYLIKVAFFNDKNDDNSA
SIO_010081: CHELV3228_RS09735
subclass of: SO_0000673
so part of: CHELV3228_RS09735
location: 2227..2682
location: region:2227-2682:1
so has part: feature:2227-2682:1:exon

WP_082200878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2227-2682:1:exon

CHELV3228_RS09745
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS09745
old locus tag: CHELV3228_b0005
so part of: sequence
location: complement(3044..3871)
location: region:3044-3871:-1
so has part: feature:3044-3871:-1:exon
subclass of: SO_0000010

52037826
type: Gene
SIO_000068: ncbigene

position:3044:-1
position: 3044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3871:-1
position: 3871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3044-3871:-1:exon

CHELV3228_RS09745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS09745
old locus tag: CHELV3228_b0005
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSIFRISVEKLNVLKAYRQEFLTECDTKFKDFKNNTLGLKLDEDSKEYYGDKDYLKELFAKIPSDFKARLEDTLKPFMQKNDKEWLDIFRFYAFVCFEGGDNVRILADMYNEGGLSINFYNGIIKEPDIKAYQALFKVLEFLSIKELCALKNIVENSYFNEDEILNEFFEYEDFLYTFLIWRDIVNEAHFSIIYEKSYNYPFDFLSSEEIFENLNEKLEKNGAKENGCFFVEKGLYAKKNLIIEEAKELFEDADFSSLNDKKDRLEFLIKKLLQK
SIO_010081: CHELV3228_RS09745
subclass of: SO_0000673
so part of: CHELV3228_RS09745
location: complement(3044..3871)
location: region:3044-3871:-1
so has part: feature:3044-3871:-1:exon

WP_082200880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3044-3871:-1:exon

CHELV3228_RS09750
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS09750
old locus tag: CHELV3228_b0006
so part of: sequence
location: complement(3920..4237)
location: region:3920-4237:-1
so has part: feature:3920-4237:-1:exon
subclass of: SO_0000010

52037827
type: Gene
SIO_000068: ncbigene

position:3920:-1
position: 3920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4237:-1
position: 4237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3920-4237:-1:exon

CHELV3228_RS09750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS09750
old locus tag: CHELV3228_b0006
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSLEILLSKERLQSYASLSEHFENLALIGRLAPKLLLIEICLRNITNDILLHQGGFAKQELLNALKKDRDTIIEKIQNKEKDWIPSYKMLHQKNVEKEQELNYN
SIO_010081: CHELV3228_RS09750
subclass of: SO_0000673
so part of: CHELV3228_RS09750
location: complement(3920..4237)
location: region:3920-4237:-1
so has part: feature:3920-4237:-1:exon

WP_082200881.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3920-4237:-1:exon

CHELV3228_RS09755
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS09755
old locus tag: CHELV3228_b0007
so part of: sequence
location: complement(4234..4482)
location: region:4234-4482:-1
so has part: feature:4234-4482:-1:exon
subclass of: SO_0000010

52037828
type: Gene
SIO_000068: ncbigene

position:4234:-1
position: 4234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4482:-1
position: 4482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4234-4482:-1:exon

CHELV3228_RS09755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS09755
old locus tag: CHELV3228_b0007
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKKIIDTQILAQVGQGAEMKENRTAKQTQTPQTQEPIIDGLKIFTLSLKVSEYVKLKAYCQSQNLSIAKFFKECIREKGIV
SIO_010081: CHELV3228_RS09755
subclass of: SO_0000673
so part of: CHELV3228_RS09755
location: complement(4234..4482)
location: region:4234-4482:-1
so has part: feature:4234-4482:-1:exon

WP_082200882.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4234-4482:-1:exon

CHELV3228_RS09760
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS09760
old locus tag: CHELV3228_b0008
so part of: sequence
location: complement(4534..5193)
location: region:4534-5193:-1
so has part: feature:4534-5193:-1:exon
subclass of: SO_0000010

52037829
type: Gene
SIO_000068: ncbigene

position:4534:-1
position: 4534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5193:-1
position: 5193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4534-5193:-1:exon

CHELV3228_RS09760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS09760
old locus tag: CHELV3228_b0008
inference: COORDINATES: protein motif:HMM:NF013793.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MAIISFSHPKGGVGKTTICFNYLVHLQDKKKKFICIDLDGQSSISNLNQLRVLNKLRGFDIKKFKDERELINFINKNDDDTIIVIDSGGFDSAFNRIVLSVSDLVITPFSDSPLEILRLIDFDKNILNQIEEQSKQKLKIHLLINRISSSIKQFDYIYKQMENCSHYTFLKNLIRDKVIFKNSLTEGKGILEIQTKNSSEIKAQEELKKLFKEIDNLLN
SIO_010081: CHELV3228_RS09760
subclass of: SO_0000673
so part of: CHELV3228_RS09760
location: complement(4534..5193)
location: region:4534-5193:-1
so has part: feature:4534-5193:-1:exon

WP_082200883.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4534-5193:-1:exon

CHELV3228_RS09765
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS09765
old locus tag: CHELV3228_b0009
so part of: sequence
location: complement(5322..6026)
location: region:5322-6026:-1
so has part: feature:5322-6026:-1:exon
subclass of: SO_0000010

52037830
type: Gene
SIO_000068: ncbigene

position:5322:-1
position: 5322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6026:-1
position: 6026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5322-6026:-1:exon

CHELV3228_RS09765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS09765
old locus tag: CHELV3228_b0009
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002814355.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fic family protein
translation: MWDTQDTYTDIDTFLLSTNKVNATSLSDLEHKERILAQLAMQELSKNEIKGNFNYEHLKAIHQFIFKDIYTWAGKDRYEEKFFKALHKGDSQFCVGVLIPQESKRIFDGLMEKELLKTCKNDEQFIKELANFMADLNAMHPFCEGNGRTQRIFINQLAKNAGYELDLNLTPKEIMLRASIEAMNHQNSSLEKIIKNNLKKIDMSKQREIEAMQEAVRKASQNLKPKDKSKDLDR
SIO_010081: CHELV3228_RS09765
subclass of: SO_0000673
so part of: CHELV3228_RS09765
location: complement(5322..6026)
location: region:5322-6026:-1
so has part: feature:5322-6026:-1:exon

WP_082200908.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5322-6026:-1:exon

CHELV3228_RS09770
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS09770
old locus tag: CHELV3228_b0010
so part of: sequence
location: complement(6026..6265)
location: region:6026-6265:-1
so has part: feature:6026-6265:-1:exon
subclass of: SO_0000010

52037831
type: Gene
SIO_000068: ncbigene

position:6265:-1
position: 6265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6026-6265:-1:exon

CHELV3228_RS09770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS09770
old locus tag: CHELV3228_b0010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004276322.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLQNCKEVYSLEESLNILNKYANNLTPRQYDNIKSIICSFAIENMHLNEEDILNGIAIQKGDKSVLEITQNYKAQWGCL
SIO_010081: CHELV3228_RS09770
subclass of: SO_0000673
so part of: CHELV3228_RS09770
location: complement(6026..6265)
location: region:6026-6265:-1
so has part: feature:6026-6265:-1:exon

WP_082200884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6026-6265:-1:exon

CHELV3228_RS09775
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
gene: vapD
locus tag: CHELV3228_RS09775
old locus tag: CHELV3228_b0011
so part of: sequence
location: complement(6305..6727)
location: region:6305-6727:-1
so has part: feature:6305-6727:-1:exon
subclass of: SO_0000010

52037832
type: Gene
SIO_000068: ncbigene

position:6305:-1
position: 6305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6727:-1
position: 6727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6305-6727:-1:exon

CHELV3228_RS09775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
gene: vapD
locus tag: CHELV3228_RS09775
old locus tag: CHELV3228_b0011
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004276317.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VapD family protein
translation: MKKRKAINFDLSTEELKKHFGDTREPYSQIKNFMLENGFEHRQYSGYASIEVMSDRQIAKIARKLNDKFAWISSCIQEFDVTDIGEQYSLSHIFKDNQTLSQTKNLQKDSKQEQIKTMQEAVKKASQNLKPKDKSKDLNR
SIO_010081: CHELV3228_RS09775
subclass of: SO_0000673
so part of: CHELV3228_RS09775
location: complement(6305..6727)
location: region:6305-6727:-1
so has part: feature:6305-6727:-1:exon

WP_082200885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6305-6727:-1:exon

CHELV3228_RS09780
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS09780
old locus tag: CHELV3228_b0012
so part of: sequence
location: complement(6724..7053)
location: region:6724-7053:-1
so has part: feature:6724-7053:-1:exon
subclass of: SO_0000010

52037833
type: Gene
SIO_000068: ncbigene

position:6724:-1
position: 6724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7053:-1
position: 7053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6724-7053:-1:exon

CHELV3228_RS09780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS09780
old locus tag: CHELV3228_b0012
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002957412.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTTSSAKKYPLLGTHFILDEEKILKEDKYDLEKIYKAIDEMAEHSEMVKIDKNTYHCKGDENDLGCLGTFVYTNLIKCDWFTLNVKEWTWLSEKEGDETLIGDDMGIWK
SIO_010081: CHELV3228_RS09780
subclass of: SO_0000673
so part of: CHELV3228_RS09780
location: complement(6724..7053)
location: region:6724-7053:-1
so has part: feature:6724-7053:-1:exon

WP_004276316.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6724-7053:-1:exon

CHELV3228_RS09785
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS09785
old locus tag: CHELV3228_b0013
so part of: sequence
location: complement(7319..8164)
location: region:7319-8164:-1
so has part: feature:7319-8164:-1:exon
subclass of: SO_0000010

52037834
type: Gene
SIO_000068: ncbigene

position:7319:-1
position: 7319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8164:-1
position: 8164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7319-8164:-1:exon

CHELV3228_RS09785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS09785
old locus tag: CHELV3228_b0013
inference: COORDINATES: protein motif:HMM:NF021182.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YopX family protein
translation: MKEKAKIILEQNIELLNSIHNIVEFFKKHKNLKIYENSFNLGNNESYEYFHLSFIRSKKYNDCLDFTINNHTHRKLVFEEVEYKEILKTLILVLINIYKLKDFENLKDFDFRILKRKNERGNYASCNNDECVCNIAFLYGDEAKFRLGEFILSDEKTGQETQVELYTGYKDSKGNKIYAGDIVSAGGTISVIDFEETEFIPRDTYSARKITGLDEYLNHTPCIVLGNIHENKDLIDFKKYQKALQKQQTFLQQKTFLREQLSDEDIERIMDSCMKEMKKKK
SIO_010081: CHELV3228_RS09785
subclass of: SO_0000673
so part of: CHELV3228_RS09785
location: complement(7319..8164)
location: region:7319-8164:-1
so has part: feature:7319-8164:-1:exon

WP_082200886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7319-8164:-1:exon

CHELV3228_RS09790
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS09790
old locus tag: CHELV3228_b0014
so part of: sequence
location: complement(8164..10335)
location: region:8164-10335:-1
so has part: feature:8164-10335:-1:exon
subclass of: SO_0000010

52037835
type: Gene
SIO_000068: ncbigene

position:10335:-1
position: 10335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8164-10335:-1:exon

CHELV3228_RS09790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS09790
old locus tag: CHELV3228_b0014
EC number: 5.6.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004276310.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase
translation: MTLFIAEKPELARAIAEGLSGEIKERQRSHIIKGENIITHAFGHILELKKPELYNKAYEKWNLNDLPLNLPRPLKRIAKAEAKNQLSVIVNFINDARVKEIVHCGDADEEGQILIDEILAYARNNKPVMRCLINDLTPKAIAKAIKEKKSNNEFKNLSASGFARNEADFLVGLNFTRLYTLLNQNNGGNGVISVGRVQTPILGLIVHRELDFKSHKALHYYAVSGNFALNNIIINAPLKLNKDEKITEEDKALAIKTLCENKEFKAHITKESKKEYPPLPFNLLELQAETSKLYGFSPDKTLKLTQNLRETHKAISYNRSDCQYLPENLFEEAPALIETLKANFNEDIGQNSANTSIKSKAFDDSKLSAHYAIVPLQTRLDLNKLSADELKVYTLISKRFLMQFYNPCEYESFTFTFSLETYVFETSKRVDTKLGFKEFFANNETKEHKDYESLLALNFALCKSIELKKEQTKPKPLYTMTTLLKDLNQVSKYVKDERIKKLLIEKDKDKKGESGGIGTPATRSNHIKTLIDREYIEVSKDKAQKIKATEKGINLIKALPPLLTQPDMTALWFEKQKEILNGALSKEEFLKEIDSFILELINENKGSKMQFNQTNDNKISCPKCKEGYLRELDGKFGKFFSCSAYKEGCDFKAKSVNGKPDLSPKQKIKPSEYSCPQCQKGFLVRRESKNQKGSFFYGCSEFKNGCRFLCPEENGKPKIEKVG
SIO_010081: CHELV3228_RS09790
subclass of: SO_0000673
so part of: CHELV3228_RS09790
location: complement(8164..10335)
location: region:8164-10335:-1
so has part: feature:8164-10335:-1:exon

WP_082200887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8164-10335:-1:exon

CHELV3228_RS09795
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS09795
old locus tag: CHELV3228_b0015
so part of: sequence
location: complement(10433..11053)
location: region:10433-11053:-1
so has part: feature:10433-11053:-1:exon
subclass of: SO_0000010

52037836
type: Gene
SIO_000068: ncbigene

position:10433:-1
position: 10433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11053:-1
position: 11053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10433-11053:-1:exon

CHELV3228_RS09795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS09795
old locus tag: CHELV3228_b0015
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAVVTLDKGKNPKAVVNVDNSLNYQDKEGNLQSKQIKTAITEIAEEAGKVTAMGFGAVTMSVKDSEGAYKNYFVNRNENNGTITLVPTDLQDKTDSSQNVYFNRHSKENNGKNYFFYTLNDKSEAGKAFLENLSTTEWQDKDGASRSNLEARVVLHNPELVKQLKEKGENALAVVSKDNFRITTKEEHFKAKDSTQEKKQEAHLDR
SIO_010081: CHELV3228_RS09795
subclass of: SO_0000673
so part of: CHELV3228_RS09795
location: complement(10433..11053)
location: region:10433-11053:-1
so has part: feature:10433-11053:-1:exon

WP_082200888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10433-11053:-1:exon

CHELV3228_RS09800
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS09800
old locus tag: CHELV3228_b0016
so part of: sequence
location: complement(11173..12063)
location: region:11173-12063:-1
so has part: feature:11173-12063:-1:exon
subclass of: SO_0000010

52037837
type: Gene
SIO_000068: ncbigene

position:11173:-1
position: 11173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12063:-1
position: 12063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11173-12063:-1:exon

CHELV3228_RS09800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS09800
old locus tag: CHELV3228_b0016
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEEKLKTLKTEVPFDFKKHFAEFNQILQNQKERLNKFNEEYAAKTQNHQDSVLFGYIQEISENWNNLKEVAEQINLFLNGAFNREELADLNKFLSTNAVLKEINECLTNLLNTKSKLEEEKLTESIEEIVSLKSQFISRLEKEVENMRNLFGDFVNKKIEDFEKSMETGFDNQIKMLNKKFTEDFTQTYDATFEKLNHLSEATQDKITILKKNVKINYIFYSINGLLIFLLAFSSYFLFNAYRDYQNKSKALVNIATKLESQISINAQGQVTLSLAKLKTIFKEDKNSIYLTIKEE
SIO_010081: CHELV3228_RS09800
subclass of: SO_0000673
so part of: CHELV3228_RS09800
location: complement(11173..12063)
location: region:11173-12063:-1
so has part: feature:11173-12063:-1:exon

WP_004276308.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11173-12063:-1:exon

CHELV3228_RS09805
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS09805
old locus tag: CHELV3228_b0017
so part of: sequence
location: complement(12063..12656)
location: region:12063-12656:-1
so has part: feature:12063-12656:-1:exon
subclass of: SO_0000010

52037838
type: Gene
SIO_000068: ncbigene

position:12656:-1
position: 12656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12063-12656:-1:exon

CHELV3228_RS09805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS09805
old locus tag: CHELV3228_b0017
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004276307.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbM/KikA/MpfK family conjugal transfer protein
translation: MKKIVLSVALAGTLASAVNLEYLSGDSKLACEAMLCLASPVQPAECSASLARYFSIHFKKPWKTVNARKAFLNLCPVESQDSEMLKYKNEILANLDGGCSVETLNQRVEKTLLRVEKVCESNGAGEGSSCRSVNIYGYRIDPNLTHSCKLLSSSAYTDYHLKYTCNGKFYEEKDWNNGFVETNGAKEEIKKQCWVNE
SIO_010081: CHELV3228_RS09805
subclass of: SO_0000673
so part of: CHELV3228_RS09805
location: complement(12063..12656)
location: region:12063-12656:-1
so has part: feature:12063-12656:-1:exon

WP_082200889.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12063-12656:-1:exon

CHELV3228_RS09810
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS09810
old locus tag: CHELV3228_b0018
so part of: sequence
location: complement(12666..13076)
location: region:12666-13076:-1
so has part: feature:12666-13076:-1:exon
subclass of: SO_0000010

52037839
type: Gene
SIO_000068: ncbigene

position:12666:-1
position: 12666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13076:-1
position: 13076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12666-13076:-1:exon

CHELV3228_RS09810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS09810
old locus tag: CHELV3228_b0018
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006803315.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cag pathogenicity island Cag12 family protein
translation: MKNIKLSLALASVILLAGCGAKSPAKLQNSKNLGINNALLEQKYSFIPKDEFLSHTNFVYELELIPSGEYLIANELMVKTFLLAHNASKIIIVGDEDKIKAYKNYFLENGVRADMYLQPLDDYQNDSVKLLFFNKK
SIO_010081: CHELV3228_RS09810
subclass of: SO_0000673
so part of: CHELV3228_RS09810
location: complement(12666..13076)
location: region:12666-13076:-1
so has part: feature:12666-13076:-1:exon

WP_004276306.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12666-13076:-1:exon

CHELV3228_RS09815
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS09815
old locus tag: CHELV3228_b0019
so part of: sequence
location: complement(13073..14893)
location: region:13073-14893:-1
so has part: feature:13073-14893:-1:exon
subclass of: SO_0000010

52037840
type: Gene
SIO_000068: ncbigene

position:13073:-1
position: 13073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14893:-1
position: 14893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13073-14893:-1:exon

CHELV3228_RS09815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS09815
old locus tag: CHELV3228_b0019
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004276305.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MDKKKVAFLTFAFVVAIIFSFFLSGILLLIFNKVHPLEFLKIWHFTIIFDGILNSYSHTYTAIIIALLISFGVLALLYFSSRQKESLFGEARFATENEIRKTGLLGNKNNYVKRGIIVGKYKDKFLKFGGQQFVTLGAPTRSGKGVGIVIPNLLHWEESAVVQDIKQECFDYTSKYRAEKLDNEVFLFNPFSARTHRYNPFTYIDMSDEENADSQLMDLANIIYPLGTDDTSKFFSLQAQNLFIGLCYLYRDLALSEKGRLFVETYNLELEFNFFGILQLSKGFELIDPNDNVKLLTGFENTYNVLDSLDILGKATKRRIGTYIQIDSPNTKSGVMSSFNAPLSAFEGETLRLATQTSDFDLRELRKKKMTIYIGITPDQLANASFILNVFWSQLILLNTKELPQQNESLKYACLLLMDEFTAPGRIQILQTSVSFIAGYNLRLLTIYQSLSQLETAPPLGYGKEGAKTLLTNHACQIFYAPREQEDAEAISKILGNKTVKQSSKSINHGQMGGSRSISETHRALMLPQELREMPFENELITIDSGKPIKCNKAFYYSDTHFMDKFKEVSPSLKSVKGIPNRNELEKAILSGECNITIPIQKGENQ
SIO_010081: CHELV3228_RS09815
subclass of: SO_0000673
so part of: CHELV3228_RS09815
location: complement(13073..14893)
location: region:13073-14893:-1
so has part: feature:13073-14893:-1:exon

WP_082200890.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13073-14893:-1:exon

CHELV3228_RS09820
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS09820
old locus tag: CHELV3228_b0020
so part of: sequence
location: complement(14912..15193)
location: region:14912-15193:-1
so has part: feature:14912-15193:-1:exon
subclass of: SO_0000010

52037841
type: Gene
SIO_000068: ncbigene

position:14912:-1
position: 14912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15193:-1
position: 15193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14912-15193:-1:exon

CHELV3228_RS09820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS09820
old locus tag: CHELV3228_b0020
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNIIFKNKSNIKKFHAFVPYIYCKNTDKREVYAVQCWDNKQLKFEKIRFQYVDEDSLRLKFNCYRSFSEEELDGNDWGILFYCPIRKLIVSLD
SIO_010081: CHELV3228_RS09820
subclass of: SO_0000673
so part of: CHELV3228_RS09820
location: complement(14912..15193)
location: region:14912-15193:-1
so has part: feature:14912-15193:-1:exon

WP_082200891.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14912-15193:-1:exon

CHELV3228_RS09825
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS09825
old locus tag: CHELV3228_b0021
so part of: sequence
location: complement(15190..15894)
location: region:15190-15894:-1
so has part: feature:15190-15894:-1:exon
subclass of: SO_0000010

52037842
type: Gene
SIO_000068: ncbigene

position:15190:-1
position: 15190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15894:-1
position: 15894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15190-15894:-1:exon

CHELV3228_RS09825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS09825
old locus tag: CHELV3228_b0021
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004276304.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNEKDLQNKILELENYVKETKKNITRAEENIKQCEKAIQALKDLAWDRQSKKESSSMYKVLKDDKTHTMVKSEAGNIKVDKDFMEKEITKHLDNPSLRGMVTTKEMLSFPKVAKGVEAEYNKLHKSYTWKTKANDGNTIRYGSREYNNTNRLLTAYTETGYNERQEQGRGEQGQPHHLIKDLNFLRPANDIIPQKTAKEVKAQFSQEQIKTMQEAVKKASRKLKENAKNKEIDL
SIO_010081: CHELV3228_RS09825
subclass of: SO_0000673
so part of: CHELV3228_RS09825
location: complement(15190..15894)
location: region:15190-15894:-1
so has part: feature:15190-15894:-1:exon

WP_082200909.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15190-15894:-1:exon

CHELV3228_RS09830
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
gene: virB11
locus tag: CHELV3228_RS09830
old locus tag: CHELV3228_b0022
so part of: sequence
location: complement(15894..16883)
location: region:15894-16883:-1
so has part: feature:15894-16883:-1:exon
subclass of: SO_0000010

52037843
type: Gene
SIO_000068: ncbigene

position:16883:-1
position: 16883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15894-16883:-1:exon

CHELV3228_RS09830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
gene: virB11
locus tag: CHELV3228_RS09830
old locus tag: CHELV3228_b0022
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012108061.1
GO component: GO:0043684 - type IV secretion system complex [Evidence IEA]
GO process: GO:0044097 - secretion by the type IV secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type DNA transfer ATPase VirB11
translation: MSISLQKYASSFFGKYLNDPLINEICYNGEDKIWFLNANGEWESEDTKLDFDGAEAFSQASASYKEDQIDKSKPILSCVLVGGERVQIVMPPATKREMISITIRKPSQKRFTINDHEKSGLFESVKDFNSKQTNLKNIELLELYQNKNYKNFLAKAVSFGKNIVICGETGSGKTTFMKSLIDFIPIDERIITIEDVEEIKFYEHKNFVQLFYPSEAKSTDFLNSATLLKSCLRMKPDRILLAELRGAETYDFVNVLASGHGGSLTSCHAGSSEEAFKRLSMMILQNPQGQCIPYEIINAMLRDLIDIIVHIYAYQGKRRISEIYFKEAL
SIO_010081: CHELV3228_RS09830
subclass of: SO_0000673
so part of: CHELV3228_RS09830
location: complement(15894..16883)
location: region:15894-16883:-1
so has part: feature:15894-16883:-1:exon

WP_004276303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15894-16883:-1:exon

CHELV3228_RS09835
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS09835
old locus tag: CHELV3228_b0023
so part of: sequence
location: complement(16880..17464)
location: region:16880-17464:-1
so has part: feature:16880-17464:-1:exon
subclass of: SO_0000010

52037844
type: Gene
SIO_000068: ncbigene

position:16880:-1
position: 16880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17464:-1
position: 17464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16880-17464:-1:exon

CHELV3228_RS09835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS09835
old locus tag: CHELV3228_b0023
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012662269.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKKEKRNIYNVSFNEKNSTPINAELEAIENIIIDYVVHYIKGWHNERRDKGRGAEHIKLHLEKGSEGEINLEELLNLGNSIREYLKIFKEPFDDGRGGKVFEWENDEGVRFRIATDKIKGEGLIPPLSPFDEIIITFYSDRNLNEKMEFKNPKVREYYENKEIKQEQIKTMQEAVKKASQKLKENAKNKEIEL
SIO_010081: CHELV3228_RS09835
subclass of: SO_0000673
so part of: CHELV3228_RS09835
location: complement(16880..17464)
location: region:16880-17464:-1
so has part: feature:16880-17464:-1:exon

WP_004276302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16880-17464:-1:exon

CHELV3228_RS09840
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
gene: virB10
locus tag: CHELV3228_RS09840
old locus tag: CHELV3228_b0024
so part of: sequence
location: complement(17461..18111)
location: region:17461-18111:-1
so has part: feature:17461-18111:-1:exon
subclass of: SO_0000010

52037845
type: Gene
SIO_000068: ncbigene

position:17461:-1
position: 17461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18111:-1
position: 18111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17461-18111:-1:exon

CHELV3228_RS09840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
gene: virB10
locus tag: CHELV3228_RS09840
old locus tag: CHELV3228_b0024
inference: COORDINATES: protein motif:HMM:NF038091.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein VirB10
translation: MVILCKGEVFTPSVASYSKFNPSLTLTKGTYIGCALKTRLVSEVKGGIACIVSNDVYSSNGHTLLIEKGSIITGSYSGGELNDGSTRLFVIWQEIRTPNNILIPVNSNASDELGASGMEGYVNHHYMKRFGAAILLSIIDDSFSVIADKLSNNSKGNNYYDYTENSREQASKIAEIALEKMIDIKPTLYKNQGDLVGVYVNRDIDFSKVYGLRQKR
SIO_010081: CHELV3228_RS09840
subclass of: SO_0000673
so part of: CHELV3228_RS09840
location: complement(17461..18111)
location: region:17461-18111:-1
so has part: feature:17461-18111:-1:exon

WP_244289612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17461-18111:-1:exon

CHELV3228_RS10170
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS10170
so part of: sequence
location: complement(18391..18612)
location: region:18391-18612:-1
so has part: feature:18391-18612:-1:exon
subclass of: SO_0000010

52037906
type: Gene
SIO_000068: ncbigene

position:18391:-1
position: 18391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18612:-1
position: 18612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18391-18612:-1:exon

CHELV3228_RS10170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS10170
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSENINHNNHLEQLRTKNFKALAIFALSAFLVVGIVVWVLLKKENTNEIKVQKESSMQESIKDKEFNENASPK
SIO_010081: CHELV3228_RS10170
subclass of: SO_0000673
so part of: CHELV3228_RS10170
location: complement(18391..18612)
location: region:18391-18612:-1
so has part: feature:18391-18612:-1:exon

WP_156890204.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18391-18612:-1:exon

CHELV3228_RS09845
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
gene: virB9
locus tag: CHELV3228_RS09845
old locus tag: CHELV3228_b0025
so part of: sequence
location: complement(18605..19555)
location: region:18605-19555:-1
so has part: feature:18605-19555:-1:exon
subclass of: SO_0000010

52037846
type: Gene
SIO_000068: ncbigene

position:18605:-1
position: 18605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19555:-1
position: 19555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18605-19555:-1:exon

CHELV3228_RS09845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
gene: virB9
locus tag: CHELV3228_RS09845
old locus tag: CHELV3228_b0025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004276300.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein VirB9
translation: MKKLILVSFLMCSFLNALELPQTSKYDKKITYAVFNAHQVFRIASANGYVSVVEFSKDERIINTATGFSQGWELTDKGNLLFIKPKAYTTKYIHSENPEEGNAISEIIVDPNPAEWKTNLIVTTNLNMYVFDLVLNSKEKVYKLSFSYPQKELENVQKLQAELKKQIEEDKIDTSLNRVSVPRNWDFYMKVNKESESIAPNFAYDDGVFTYLGFDNTKTFPAVFAYELGKESILNTHIKKIGNYDVLVIHKTLPKILLRSGEKVVGIFNRGYAKNPLNSTPQTTNDKEVERVLLDEKSKKKEQNIKNLKELGLKDE
SIO_010081: CHELV3228_RS09845
subclass of: SO_0000673
so part of: CHELV3228_RS09845
location: complement(18605..19555)
location: region:18605-19555:-1
so has part: feature:18605-19555:-1:exon

WP_082200892.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18605-19555:-1:exon

CHELV3228_RS09850
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS09850
old locus tag: CHELV3228_b0026
so part of: sequence
location: complement(19552..20211)
location: region:19552-20211:-1
so has part: feature:19552-20211:-1:exon
subclass of: SO_0000010

52037847
type: Gene
SIO_000068: ncbigene

position:19552:-1
position: 19552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20211:-1
position: 20211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19552-20211:-1:exon

CHELV3228_RS09850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS09850
old locus tag: CHELV3228_b0026
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002809287.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MSIYKDSFDFETSVKYLIEQSNKKAWLIAIVSVFITLLSILAVLVLTPLKTVEPYVIRVDNTTGMVDILTTLDEKQITQNEALDKHFIGQYIKAREGYFFDMLNQDYIFTQLLSSPEVAESYRAIYSGENSRDSRLGSFTKVEVNILSVVLGESNGIKTATARINLKSTNKNSKEESLSTKVITLSYKYLLNEMQEKNRILNPLGFKVLTYRIDEEISK
SIO_010081: CHELV3228_RS09850
subclass of: SO_0000673
so part of: CHELV3228_RS09850
location: complement(19552..20211)
location: region:19552-20211:-1
so has part: feature:19552-20211:-1:exon

WP_004276299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19552-20211:-1:exon

CHELV3228_RS09855
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS09855
old locus tag: CHELV3228_b0027
so part of: sequence
location: complement(20208..20417)
location: region:20208-20417:-1
so has part: feature:20208-20417:-1:exon
subclass of: SO_0000010

52037848
type: Gene
SIO_000068: ncbigene

position:20208:-1
position: 20208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20417:-1
position: 20417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20208-20417:-1:exon

CHELV3228_RS09855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS09855
old locus tag: CHELV3228_b0027
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAELNLSNFLDLDIEEYKARIGKDKTKKIITSQLQVKQETLIEMFKEFMLLKMEIGALEKELEVLEEPK
SIO_010081: CHELV3228_RS09855
subclass of: SO_0000673
so part of: CHELV3228_RS09855
location: complement(20208..20417)
location: region:20208-20417:-1
so has part: feature:20208-20417:-1:exon

WP_082200893.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20208-20417:-1:exon

CHELV3228_RS10175
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS10175
so part of: sequence
location: complement(20410..20553)
location: region:20410-20553:-1
so has part: feature:20410-20553:-1:exon
subclass of: SO_0000010

52037907
type: Gene
SIO_000068: ncbigene

position:20410:-1
position: 20410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20553:-1
position: 20553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20410-20553:-1:exon

CHELV3228_RS10175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS10175
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTIFLVFLSVFFIACASKNTKDSLFDGNLVPVNSEEIKQNLGENNG
SIO_010081: CHELV3228_RS10175
subclass of: SO_0000673
so part of: CHELV3228_RS10175
location: complement(20410..20553)
location: region:20410-20553:-1
so has part: feature:20410-20553:-1:exon

WP_004276297.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20410-20553:-1:exon

CHELV3228_RS09860
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS09860
old locus tag: CHELV3228_b0028
so part of: sequence
location: complement(20564..21559)
location: region:20564-21559:-1
so has part: feature:20564-21559:-1:exon
subclass of: SO_0000010

52037849
type: Gene
SIO_000068: ncbigene

position:20564:-1
position: 20564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21559:-1
position: 21559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20564-21559:-1:exon

CHELV3228_RS09860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS09860
old locus tag: CHELV3228_b0028
inference: COORDINATES: protein motif:HMM:NF016491.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MQTEIFSNLGAIVEQSFELLKNASLNDKFIELQAIISSMIVISIMYQGYLTMAGRQQDPIRELAWDIGRKMLILCFVLNVNGWLNLTIDTLNAVYEWAGGGSVFYAKLDELNNSFFTSLEEVWKTYSGLEKLIGFFVCLFMIISYLAVILSFAFSIIKTSITNTLLIIVLPLALLFFMYQTTKQVFQQWLQMFFSNIILLILLTNFIDFICGNLTTLYSQGNKSDSLFITIAFPILISAILITIVSTMQGLASNLAQVSLDASAGGAMGQLGSGVGLAFRGGKTAGKLGWKGGKLAGKGAWGTGKGVYKAGLGLGKGGAWLAKKAWGQISG
SIO_010081: CHELV3228_RS09860
subclass of: SO_0000673
so part of: CHELV3228_RS09860
location: complement(20564..21559)
location: region:20564-21559:-1
so has part: feature:20564-21559:-1:exon

WP_082200894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20564-21559:-1:exon

CHELV3228_RS09865
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS09865
old locus tag: CHELV3228_b0029
so part of: sequence
location: complement(21559..22296)
location: region:21559-22296:-1
so has part: feature:21559-22296:-1:exon
subclass of: SO_0000010

52037850
type: Gene
SIO_000068: ncbigene

position:22296:-1
position: 22296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21559-22296:-1:exon

CHELV3228_RS09865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS09865
old locus tag: CHELV3228_b0029
inference: COORDINATES: protein motif:HMM:NF019608.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MKFSHLSLAVLVSLSQCFGAGIPVVDTTANQQMSMQNAKQVAEWAKEASRWSETVAHYQKQLQAYAEELKAKTGIKDSLSTLKDFSQIYADFGRAYENIQDFNEKVLSDPDGFIKDKLKDTYSKYMIFDRCEFIQDTNRRNICLSQMLTTAAEIQSTQEKSKQLNGIAKVIQEIDAKMKQSKDIKESQDLANALSVQTAKLQVINANLQNEHYRYEAERRAKEEQINQMISKGMQEDFIPQGFKK
SIO_010081: CHELV3228_RS09865
subclass of: SO_0000673
so part of: CHELV3228_RS09865
location: complement(21559..22296)
location: region:21559-22296:-1
so has part: feature:21559-22296:-1:exon

WP_082200895.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21559-22296:-1:exon

CHELV3228_RS09870
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS09870
old locus tag: CHELV3228_b0030
so part of: sequence
location: complement(22293..22913)
location: region:22293-22913:-1
so has part: feature:22293-22913:-1:exon
subclass of: SO_0000010

52037851
type: Gene
SIO_000068: ncbigene

position:22293:-1
position: 22293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22913:-1
position: 22913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22293-22913:-1:exon

CHELV3228_RS09870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS09870
old locus tag: CHELV3228_b0030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004276294.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rha family transcriptional regulator
translation: MSFLHSLIINDCEVKFSANENKTFCTSLDIARVFGKRHDHVLRDIENLLKDLREIGASNELLNFGEVVRISKTTNPKSGKLVNRKMPMYKITRDGFSLLAMGFTGKKALQWKIAFIDAFNTMEKLLQKEIYSPNKYLTDLMRQIYPNLPQDDYEINVLITNKPHTREAKNIFSLNYLVDNRTPKDPNINFNISFQTRKIKSPKEKK
SIO_010081: CHELV3228_RS09870
subclass of: SO_0000673
so part of: CHELV3228_RS09870
location: complement(22293..22913)
location: region:22293-22913:-1
so has part: feature:22293-22913:-1:exon

WP_082200896.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22293-22913:-1:exon

CHELV3228_RS09875
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS09875
old locus tag: CHELV3228_b0031
so part of: sequence
location: complement(22910..25681)
location: region:22910-25681:-1
so has part: feature:22910-25681:-1:exon
subclass of: SO_0000010

52037852
type: Gene
SIO_000068: ncbigene

position:22910:-1
position: 22910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25681:-1
position: 25681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22910-25681:-1:exon

CHELV3228_RS09875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS09875
old locus tag: CHELV3228_b0031
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004276293.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB4 family type IV secretion/conjugal transfer ATPase
translation: MQAIPLFKGLTRPPMIFGVPIVPLFVAMGAIFLISFYTQNIFMTILSVPVYFVMKQMAKKDDFIFHLLFLKMKFFTNPFSKKFHNVKTYSANHYNHKQNSKNFIPKLSLFHLNAEPNFEKLIPFSSIIDEGVVITKDYLFVATYEIEGISFETKSDEELDFKNEALNMLFKSFANESVSFYFHNIRHKIEKSLQSNFTNSYLKELDEKYYEIFKDGALYKNSLFLSIVYNPISKLEKQSFKKLSLMNKSKELKSYLQKFKELILRLEANLNSFEAKRLCEYEENGNLFSKQLEFYNYLLGGKFSKVRLLKSPIYEYLTGNLNSIYFNYDMAQLNYNDENKKFVRAVEIKDYSSEVHAGILNVLMYLDIEYTITQSFQTLARIDAKSALDKQRKQLIASEDDAISQVEQLDFALDSLAGGELSFGKYHFEMLIYGDTPKECKDNANTVITKLNELGFMASIANVALPSAYFSTLPCNFSLRPRVNLLSSLNYSALIALHNFNRGKKNKNCWGEAVSMLKTRSKSPYYLNFHQSGGKNKDDFGEFLLANTLILGQSSGGKTVFMNFSFNQMLKYADKNTFPNDLPDEKKQFTAVYLDKDKGALGNILCAGGRYISIENGKPTGFNPFMVESTPENIRALKNIITLCVTRKGEILNTKEEKKLSDAVDFIMTQFEVQERKYPISLLLENLTEDVNDDNSLKSRLLAFKQGKQFGWVFDNEFDNLDFPDSINVFGIDGTEFLDDSDVNGILSYFILWRVMNLADGRRLVIDIDEAWKWLENDIVANEVKNKFKTIRKQNGFLRLATQSVEDFLKLPIAKTIIEQSATKIFLPNPQAREEDYVGGLNLSFDEYEIIKNFQPENRNLLVKRQDESVIANFNLSSLGKENLMILSTGTAFIDTIETIFKQENKSLDEKIAELKKFYKEQK
SIO_010081: CHELV3228_RS09875
subclass of: SO_0000673
so part of: CHELV3228_RS09875
location: complement(22910..25681)
location: region:22910-25681:-1
so has part: feature:22910-25681:-1:exon

WP_082200897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22910-25681:-1:exon

CHELV3228_RS09880
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS09880
old locus tag: CHELV3228_b0032
so part of: sequence
location: complement(25690..25947)
location: region:25690-25947:-1
so has part: feature:25690-25947:-1:exon
subclass of: SO_0000010

52037853
type: Gene
SIO_000068: ncbigene

position:25690:-1
position: 25690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25947:-1
position: 25947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25690-25947:-1:exon

CHELV3228_RS09880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS09880
old locus tag: CHELV3228_b0032
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006803299.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbC/VirB2 family protein
translation: MKAKLFIIFSPLFVFSAGGIDKVNSFLENLSTALYGIGAVVLTIAFMWAGFKIMFQGQTLREVAPVFIGGVLVGAASAIAGYIIA
SIO_010081: CHELV3228_RS09880
subclass of: SO_0000673
so part of: CHELV3228_RS09880
location: complement(25690..25947)
location: region:25690-25947:-1
so has part: feature:25690-25947:-1:exon

WP_082200898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25690-25947:-1:exon

CHELV3228_RS09885
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS09885
old locus tag: CHELV3228_b0033
so part of: sequence
location: 26119..26442
location: region:26119-26442:1
so has part: feature:26119-26442:1:exon
subclass of: SO_0000010

52037854
type: Gene
SIO_000068: ncbigene

position:26119:1
position: 26119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26442:1
position: 26442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26119-26442:1:exon

CHELV3228_RS09885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS09885
old locus tag: CHELV3228_b0033
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002779624.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAYPLLGTKIVLDEEKILKEGKYDLNDMYKIIDKYAKESGLIKIDKNTYHCRGDKNDLGCLGIFVNCNLVECDWFTLNVKEWTWLSEKEGDSDLISFFKEENEGIWQ
SIO_010081: CHELV3228_RS09885
subclass of: SO_0000673
so part of: CHELV3228_RS09885
location: 26119..26442
location: region:26119-26442:1
so has part: feature:26119-26442:1:exon

WP_082200899.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26119-26442:1:exon

CHELV3228_RS09890
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
gene: vapD
locus tag: CHELV3228_RS09890
old locus tag: CHELV3228_b0034
so part of: sequence
location: 26439..26819
location: region:26439-26819:1
so has part: feature:26439-26819:1:exon
subclass of: SO_0000010

52037855
type: Gene
SIO_000068: ncbigene

position:26439:1
position: 26439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26819:1
position: 26819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26439-26819:1:exon

CHELV3228_RS09890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
gene: vapD
locus tag: CHELV3228_RS09890
old locus tag: CHELV3228_b0034
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002801138.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VapD family protein
translation: MNLSRKAINFDLSTNKLKKYFSDTREAYGSIKNFMLKNGFEHRQYSGYTSIKPMSDKQINLLIKRLTKKCAWIGSCIKEFDVTDIGEQYSLKDTIQSLCTQELNKKINHNKNLQIQSNQKSQDIEL
SIO_010081: CHELV3228_RS09890
subclass of: SO_0000673
so part of: CHELV3228_RS09890
location: 26439..26819
location: region:26439-26819:1
so has part: feature:26439-26819:1:exon

WP_082200910.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26439-26819:1:exon

CHELV3228_RS09895
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS09895
old locus tag: CHELV3228_b0035
so part of: sequence
location: 26816..27424
location: region:26816-27424:1
so has part: feature:26816-27424:1:exon
subclass of: SO_0000010

52037856
type: Gene
SIO_000068: ncbigene

position:26816:1
position: 26816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27424:1
position: 27424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26816-27424:1:exon

CHELV3228_RS09895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS09895
old locus tag: CHELV3228_b0035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002801139.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MNIAYVRVSTNKQELDSQKLEIMEYCHKNNIKLDEILEVKISSTKSQEKRKIKDLKKKLKAGDLLIATELSRLGRSMLEIINLVLELNDNQINFLFLRQIELSNFNNPSSKLILSIYAYLAENERELISKRTKAGLENARINGKILGRPKGTLKSVYDKDIEKIKVLLDKKLSIASIWKLLYSDSGRTYDGLLWFIKKRKLK
SIO_010081: CHELV3228_RS09895
subclass of: SO_0000673
so part of: CHELV3228_RS09895
location: 26816..27424
location: region:26816-27424:1
so has part: feature:26816-27424:1:exon

WP_082200900.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26816-27424:1:exon

CHELV3228_RS09900
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS09900
old locus tag: CHELV3228_b0036
so part of: sequence
location: complement(27498..27908)
location: region:27498-27908:-1
so has part: feature:27498-27908:-1:exon
subclass of: SO_0000010

52037857
type: Gene
SIO_000068: ncbigene

position:27498:-1
position: 27498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27908:-1
position: 27908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27498-27908:-1:exon

CHELV3228_RS09900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS09900
old locus tag: CHELV3228_b0036
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSEWDTWAEEQRQRNFQRVQQEQQKKSNQAEAEMIGGAIGVIIGAFFFLVGLAFAILVLCLKYFFLFLVFLRNKFFIHWNWYVKTEDVIYQGLIWIKKIVGIILAIIFILPFVILFKWWELWLVVGIVLLYYYYGK
SIO_010081: CHELV3228_RS09900
subclass of: SO_0000673
so part of: CHELV3228_RS09900
location: complement(27498..27908)
location: region:27498-27908:-1
so has part: feature:27498-27908:-1:exon

WP_082200901.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27498-27908:-1:exon

CHELV3228_RS09905
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS09905
old locus tag: CHELV3228_b0037
so part of: sequence
location: complement(27980..29773)
location: region:27980-29773:-1
so has part: feature:27980-29773:-1:exon
subclass of: SO_0000010

52037858
type: Gene
SIO_000068: ncbigene

position:27980:-1
position: 27980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29773:-1
position: 29773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27980-29773:-1:exon

CHELV3228_RS09905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS09905
old locus tag: CHELV3228_b0037
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002835057.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MPKRNTIDTITLGIFSDENVSVLCEDTIKLERGSVAVLSGNSEVGKSFLALKVCANAINDGLKPFFWSIEDKNQAILERIKNVENFYPFNTAELEFSNELPKINKEPISSLKEELNELADCDLIVLDTFSAFFSILGFKDQNNQNDVQNFFNILTDIAKSNNQAILLLHHLDKKGESLMGSSVIINAPRLVYKLSFEKGEDKSTTTYRLLEVLKDNNNINAGEFQKTIKVLQNSSIDEPLIKNIKANSVDSNTLEIINKQDISAVSVNDLAEGYVTMNENRGVFYLSSRKLTDTNFYKAFKENDNKIEFEMTGANGSSYAISLKNSLLTQTHRNILDALFLYIKKNVDTNVIKKYQENFWDMEVRLEPYKFLKQYLNKTSNNYSWLKQKFTEISRFAYDLAFTQNVEGGDKKTIAQRDKGILMFDSVERITKDNGTIISVFVLTVRREYIKKLETESTLSYDDDLSKILINLNSLVAQDLIRFLTSFPDKKILSYSEFCEIKAYKFYKENSIISKQKKEIIKLKDKFIEFGINIYGKNVEFADYDDEFFYNKYKNENDLFFVYQSNNRVKRYIKRSDPMNQLNTKNNKFLLPKSLFD
SIO_010081: CHELV3228_RS09905
subclass of: SO_0000673
so part of: CHELV3228_RS09905
location: complement(27980..29773)
location: region:27980-29773:-1
so has part: feature:27980-29773:-1:exon

WP_082200902.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27980-29773:-1:exon

CHELV3228_RS09910
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS09910
old locus tag: CHELV3228_b0038
so part of: sequence
location: complement(30506..31636)
location: region:30506-31636:-1
so has part: feature:30506-31636:-1:exon
subclass of: SO_0000010

52037859
type: Gene
SIO_000068: ncbigene

position:30506:-1
position: 30506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31636:-1
position: 31636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30506-31636:-1:exon

CHELV3228_RS09910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS09910
old locus tag: CHELV3228_b0038
inference: COORDINATES: protein motif:HMM:NF024755.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5710 domain-containing protein
translation: MPRIRKYLNVPFKDKDEAKSLGAIWDKNAKKYFVPYYLDFTPFIKWNENAPKQNYINHNEALIQFKHALEAFGLILETYPIMNGKIQRCKTKEDKGNEKSGAYLGYLDEYPAGFMQNFKTGIKENWKFRLEKDYRSSKTEKSYSTINSQKQVQKEQELLNLQEKTALRLQKEWNEAKKALNSHLYLKNKGINNAYDLRVDRFNNLLIPLRDIKGKLWSLQRISESGRKIIGVIKTKEEKEVEYLARKKGCFYTQVSLEKQNEFLICEGFATAISLQEYLNKAVIMAIDAGNLISVIEVLKLNYPFTPIILYADNDLKNINNVGLNTAKAIKEKYEDIKVFYPNLDESEAKEGLSDFNDIVVRYGAKIIKEKMSELK
SIO_010081: CHELV3228_RS09910
subclass of: SO_0000673
so part of: CHELV3228_RS09910
location: complement(30506..31636)
location: region:30506-31636:-1
so has part: feature:30506-31636:-1:exon

WP_082200903.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30506-31636:-1:exon

CHELV3228_RS09915
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS09915
old locus tag: CHELV3228_b0039
so part of: sequence
location: complement(31644..32378)
location: region:31644-32378:-1
so has part: feature:31644-32378:-1:exon
subclass of: SO_0000010

52037860
type: Gene
SIO_000068: ncbigene

position:31644:-1
position: 31644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32378:-1
position: 32378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31644-32378:-1:exon

CHELV3228_RS09915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS09915
old locus tag: CHELV3228_b0039
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011372406.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fic family protein
translation: MLSDLSLLQREELFKTLRVSITHHSNAIEGISLSYGETKTLLETGKTANNKPLDEQLVILGFAQAYDLIIREANDKNKILDSSFIKDLHFLIFSNAQKICPHLVRKPIGAYRNEEVKIVGSSIKLTLPHLISQELDNLLYRFPSNQLNLEQIAEFHALYEKIHPFSDGNGRTGRLLMSFQCIQNNLIPPLIENENRKKYLEFLQEAQINNNIKAFAEFLEYCQKRSLDLIDRDFTQKQENKFRN
SIO_010081: CHELV3228_RS09915
subclass of: SO_0000673
so part of: CHELV3228_RS09915
location: complement(31644..32378)
location: region:31644-32378:-1
so has part: feature:31644-32378:-1:exon

WP_082200904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31644-32378:-1:exon

CHELV3228_RS09920
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS09920
old locus tag: CHELV3228_b0040
so part of: sequence
location: complement(32395..33087)
location: region:32395-33087:-1
so has part: feature:32395-33087:-1:exon
subclass of: SO_0000010

52037861
type: Gene
SIO_000068: ncbigene

position:32395:-1
position: 32395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33087:-1
position: 33087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32395-33087:-1:exon

CHELV3228_RS09920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS09920
old locus tag: CHELV3228_b0040
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKIVDNEDIESIKVDFLSLDEKLLGKDLKENLESKNPFTDLEEVGAVFSFLSHIDAVQNQKNIFLGKVENKPLNFKMELKNKNNEKINEYFFDNINLGEGNFTQGIEHLLSLGMAKEKGTLLQKLNKHLHIPNDLNLEKLKNYGYSTLETIKDISQSKILGDELSSFIDGFVKNAFSNNNKEQKKETKKELTSAQQEMLAKVKEFSSQKKSKDKEYSLSNNRKSIAMSR
SIO_010081: CHELV3228_RS09920
subclass of: SO_0000673
so part of: CHELV3228_RS09920
location: complement(32395..33087)
location: region:32395-33087:-1
so has part: feature:32395-33087:-1:exon

WP_082200905.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32395-33087:-1:exon

CHELV3228_RS09925
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS09925
old locus tag: CHELV3228_b0041
so part of: sequence
location: complement(33122..33427)
location: region:33122-33427:-1
so has part: feature:33122-33427:-1:exon
subclass of: SO_0000010

52037862
type: Gene
SIO_000068: ncbigene

position:33122:-1
position: 33122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33427:-1
position: 33427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33122-33427:-1:exon

CHELV3228_RS09925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS09925
old locus tag: CHELV3228_b0041
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKIISGLVVASLATFTFFGCSSEPRSIEEFQKMPKEELDKFRKECENKFNSADFQKELMQYATTGKSSNKEFIECQNANEAKIRNGMKEDFIPQGFKKNN
SIO_010081: CHELV3228_RS09925
subclass of: SO_0000673
so part of: CHELV3228_RS09925
location: complement(33122..33427)
location: region:33122-33427:-1
so has part: feature:33122-33427:-1:exon

WP_082200906.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33122-33427:-1:exon

CHELV3228_RS09930
type: Gene
subclass of: SO_0000704
RO_0002162: 28898
locus tag: CHELV3228_RS09930
old locus tag: CHELV3228_b0042
so part of: sequence
location: complement(33466..33708)
location: region:33466-33708:-1
so has part: feature:33466-33708:-1:exon
subclass of: SO_0000010

52037863
type: Gene
SIO_000068: ncbigene

position:33466:-1
position: 33466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33708:-1
position: 33708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33466-33708:-1:exon

CHELV3228_RS09930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 28898
locus tag: CHELV3228_RS09930
old locus tag: CHELV3228_b0042
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKLESKFITKIKKEMNQKLQKEIAKENEKLQKIRDNLLNDILLQSFNNEKVENEFLTFLDKFSLSNSKKYYKELKEAYL
SIO_010081: CHELV3228_RS09930
subclass of: SO_0000673
so part of: CHELV3228_RS09930
location: complement(33466..33708)
location: region:33466-33708:-1
so has part: feature:33466-33708:-1:exon

WP_082200907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33466-33708:-1:exon