Haladaptatus salinisoli strain PSR8 plasmid unnamed7, complete sequence.
type: Entry
definition: Haladaptatus salinisoli strain PSR8 plasmid unnamed7, complete sequence.
sequence version: NZ_CP085334.1
sequence date: 2023-07-30
sequence: sequence
division: CON
label: NZ_CP085334.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN22363859
keyword: RefSeq
source: Haladaptatus salinisoli
organism: Haladaptatus salinisoli
taxonomy: Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Halobacteriales; Haladaptataceae; Haladaptatus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP085334.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 4\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 387.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 07/30/2023 12:33:03\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,188\nCDSs (total) :: 5,129\nGenes (coding) :: 5,050\nCDSs (with protein) :: 5,050\nGenes (RNA) :: 59\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 51\nncRNAs :: 2\nPseudo Genes (total) :: 79\nCDSs (without protein) :: 79\nPseudo Genes (ambiguous residues) :: 0 of 79\nPseudo Genes (frameshifted) :: 35 of 79\nPseudo Genes (incomplete) :: 59 of 79\nPseudo Genes (internal stop) :: 17 of 79\nPseudo Genes (multiple problems) :: 27 of 79\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 17645
topology: circular
so has quality: SO_0000988
location: 1..17645
location: region:1-17645:1
RO_0002162: 2884876

NZ_CP085334
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN22363859
type: BioSample
SIO_000068: biosample

1
title: Halophilic archaea isolated from solar salterns and salt lakes
author: Cui, H.-L.
journal: Unpublished

2
title: Direct Submission
author: Cui, H.-L.
journal: Submitted (19-OCT-2021) School of Food and Biological Engineering, Jiangsu University, No 301 Xuefu Road, Jingkou District, Zhenjiang, Zhenjiang, Jiangsu 212013, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17645:1
position: 17645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-17645:1:source
so part of: sequence
organism: Haladaptatus salinisoli
mol type: genomic DNA
strain: PSR8
isolation source: saline soil
type material: type strain of Haladaptatus salinisoli
plasmid: unnamed7
country: China: Xinjiang
collection date: 2018-05

2884876
type: Taxonomy
SIO_000068: taxonomy

LIX00_RS25785
type: Gene
subclass of: SO_0000704
RO_0002162: 2884876
locus tag: LIX00_RS25785
so part of: sequence
location: 51..467
location: region:51-467:1
so has part: feature:51-467:1:exon
subclass of: SO_0000010

68579451
type: Gene
SIO_000068: ncbigene

position:51:1
position: 51
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467:1
position: 467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51-467:1:exon

LIX00_RS25785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2884876
locus tag: LIX00_RS25785
inference: COORDINATES: protein motif:HMM:NF013561.2
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribbon-helix-helix protein, CopG family
translation: MPNVSVRVDDERREELDELADNAGLSRAEYIRDALEVREDYYELQQEHKELQQKYEELHSDHEILQQEHGELREELDELQAEYDEVKQELDRVHREKRQVLAQREENQELKRYVEDELSWREQPLATRLKWWVFGKGE
SIO_010081: LIX00_RS25785
subclass of: SO_0000673
so part of: LIX00_RS25785
location: 51..467
location: region:51-467:1
so has part: feature:51-467:1:exon

WP_227357686.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51-467:1:exon

LIX00_RS25790
type: Gene
subclass of: SO_0000704
RO_0002162: 2884876
locus tag: LIX00_RS25790
so part of: sequence
location: 468..1025
location: region:468-1025:1
so has part: feature:468-1025:1:exon
subclass of: SO_0000010

68579452
type: Gene
SIO_000068: ncbigene

position:468:1
position: 468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1025:1
position: 1025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468-1025:1:exon

LIX00_RS25790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2884876
locus tag: LIX00_RS25790
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPPWVSPNSVPILVAAAIGAAGSILGGIIAQRYQRHLDAKSVRAGLATEIRSHAQVLRYLYVAIHKVQNPDEELPKEKYGIEMPQDAAHWSEENAIKTLGSFNSYLMDDTVFSENANYLGNLDEKETELIVDYYQSIRGNRQLIEDTTIITTEVYTHESIEDSIASLMQDREKLLNLLDKSMKRD
SIO_010081: LIX00_RS25790
subclass of: SO_0000673
so part of: LIX00_RS25790
location: 468..1025
location: region:468-1025:1
so has part: feature:468-1025:1:exon

WP_227357687.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:468-1025:1:exon

LIX00_RS25795
type: Gene
subclass of: SO_0000704
RO_0002162: 2884876
locus tag: LIX00_RS25795
so part of: sequence
location: complement(1265..1978)
location: region:1265-1978:-1
so has part: feature:1265-1978:-1:exon
subclass of: SO_0000010

68579453
type: Gene
SIO_000068: ncbigene

position:1265:-1
position: 1265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1978:-1
position: 1978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1265-1978:-1:exon

LIX00_RS25795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2884876
locus tag: LIX00_RS25795
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGDTSDYVTLEQVEQLLAEQRAELTAEFEARLETKDERIAELEERLDTAEYRLDATSNIDDKLDERLEDVEETLENAKPGVDAPETTLHNTLLADTPLEQVCGMTDQESRGYLSENQHRARNIALVATKIGKKTPNGYVISNKKYREELAAMLGKYPNDNTVKRTREFLDWFGKENVQIIDHRGSKKVVFDTAYAKQLGRTSYAPEECLVVEHKNSWKDMLGLHPSGNDSAGVSATV
SIO_010081: LIX00_RS25795
subclass of: SO_0000673
so part of: LIX00_RS25795
location: complement(1265..1978)
location: region:1265-1978:-1
so has part: feature:1265-1978:-1:exon

WP_227357688.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1265-1978:-1:exon

LIX00_RS25800
type: Gene
subclass of: SO_0000704
RO_0002162: 2884876
locus tag: LIX00_RS25800
so part of: sequence
location: complement(2252..2482)
location: region:2252-2482:-1
so has part: feature:2252-2482:-1:exon
subclass of: SO_0000010

68579454
type: Gene
SIO_000068: ncbigene

position:2252:-1
position: 2252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2482:-1
position: 2482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2252-2482:-1:exon

LIX00_RS25800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2884876
locus tag: LIX00_RS25800
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007273959.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVKERDEESGQYTQTVSDDELVAFLSEQGGAGTSEVASAFDYKQPTVYRRLKRLEEDDRVISRKIGGSLLWEVDNE
SIO_010081: LIX00_RS25800
subclass of: SO_0000673
so part of: LIX00_RS25800
location: complement(2252..2482)
location: region:2252-2482:-1
so has part: feature:2252-2482:-1:exon

WP_227357690.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2252-2482:-1:exon

LIX00_RS25805
type: Gene
subclass of: SO_0000704
RO_0002162: 2884876
locus tag: LIX00_RS25805
so part of: sequence
location: 2685..3053
location: region:2685-3053:1
so has part: feature:2685-3053:1:exon
subclass of: SO_0000010

68579455
type: Gene
SIO_000068: ncbigene

position:2685:1
position: 2685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3053:1
position: 3053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2685-3053:1:exon

LIX00_RS25805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2884876
locus tag: LIX00_RS25805
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007981519.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SWIM zinc finger family protein
translation: MSTTTQPQKKTVESPDEQFTVVDTAPEPIYNVRNDEKGTIYTVIVNGHDEAQSCSCPHYRYRSAFCKHMAAVEESTRTDDQCSEETIDGPFVEPPEQGGELYWKCTACGREALDVEYVHQGC
SIO_010081: LIX00_RS25805
subclass of: SO_0000673
so part of: LIX00_RS25805
location: 2685..3053
location: region:2685-3053:1
so has part: feature:2685-3053:1:exon

WP_227357691.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2685-3053:1:exon

LIX00_RS25810
type: Gene
subclass of: SO_0000704
RO_0002162: 2884876
locus tag: LIX00_RS25810
so part of: sequence
location: 3154..3336
location: region:3154-3336:1
so has part: feature:3154-3336:1:exon
subclass of: SO_0000010

68579456
type: Gene
SIO_000068: ncbigene

position:3154:1
position: 3154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3336:1
position: 3336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3154-3336:1:exon

LIX00_RS25810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2884876
locus tag: LIX00_RS25810
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007110402.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTDDSDDEQRRHCPRCGEPIQSVSISGPDGAELYPCGHVIPPDHPVLSDTENENKNDNNS
SIO_010081: LIX00_RS25810
subclass of: SO_0000673
so part of: LIX00_RS25810
location: 3154..3336
location: region:3154-3336:1
so has part: feature:3154-3336:1:exon

WP_227357692.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3154-3336:1:exon

LIX00_RS25815
type: Gene
subclass of: SO_0000704
RO_0002162: 2884876
locus tag: LIX00_RS25815
so part of: sequence
location: 3348..3572
location: region:3348-3572:1
so has part: feature:3348-3572:1:exon
subclass of: SO_0000010

68579457
type: Gene
SIO_000068: ncbigene

position:3348:1
position: 3348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3572:1
position: 3572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3348-3572:1:exon

LIX00_RS25815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2884876
locus tag: LIX00_RS25815
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRFRKIGTDESTYRAAGHVFIVLAGIALAHATFQVALTSGVGPLTSHAIGGVVALFGGFVLAQYEMAVGFGER
SIO_010081: LIX00_RS25815
subclass of: SO_0000673
so part of: LIX00_RS25815
location: 3348..3572
location: region:3348-3572:1
so has part: feature:3348-3572:1:exon

WP_227357693.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3348-3572:1:exon

LIX00_RS25820
type: Gene
subclass of: SO_0000704
RO_0002162: 2884876
locus tag: LIX00_RS25820
so part of: sequence
location: complement(4250..4441)
location: region:4250-4441:-1
so has part: feature:4250-4441:-1:exon
subclass of: SO_0000010

68579458
type: Gene
SIO_000068: ncbigene

position:4250:-1
position: 4250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4441:-1
position: 4441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4250-4441:-1:exon

LIX00_RS25820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2884876
locus tag: LIX00_RS25820
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSRQLRWLRRNWALICVVTVLGTVSAVIDYRAGVQGGYGPALIVSALVLMVLAVLDLWTDIPF
SIO_010081: LIX00_RS25820
subclass of: SO_0000673
so part of: LIX00_RS25820
location: complement(4250..4441)
location: region:4250-4441:-1
so has part: feature:4250-4441:-1:exon

WP_227357694.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4250-4441:-1:exon

LIX00_RS25825
type: Gene
subclass of: SO_0000704
RO_0002162: 2884876
locus tag: LIX00_RS25825
so part of: sequence
location: 4483..6252
location: region:4483-6252:1
so has part: feature:4483-6252:1:exon
subclass of: SO_0000010

68579459
type: Gene
SIO_000068: ncbigene

position:4483:1
position: 4483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6252:1
position: 6252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4483-6252:1:exon

LIX00_RS25825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2884876
locus tag: LIX00_RS25825
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNDQRGWILVLGYFASILFAIFVVTAAAKGYHPTIYRAVPLFVWGVFVVGLLAGFVSLYSAIRERSHKDMVRSVLLIGCLYLVFWFYPMQMGLRFWTPPRGDLLMHFGEAKAIAATHSIPELNIYPLSHILIAELHFVTNLRFGVFGTILSLLYYSMLIAGIVLVARRYGTPLLARYVLLAALPLVFNKYTHSFMPWMLIFSLIPLVFVLFDVWERTRDRRQRALISLSGIGFLMFLLLGHLMSGLVAVGAIFGVQALSEVVAWWRTTSEQRSTSAPVAWAFISVLVYPVWYLSQRSFQRAFSTIVLSVIGAAAGSASQQVSRASGSGFSTMQLIRRFVIGKWGTLFLYLGVAGLIWLPLAYRALRRRGSHQENVMTGLFAGGGVFAVFLLVFNFIASNPYRVHQVTLVMAFFVIGSALYWLSERHQSNDYAVVRSCLVVVILGAAVWSPFTIYDEDEHIIETEFEGAEHHLEYRNPEMQTKTLHMSHVLETYLVGSHADLSWQQWAFSIYKPEYQLPKHLGQNGSSLGATAGTGYAITKERDYYWWRGASEQRKREIVYYTREDARQLMGDSSTARIYSNGKFTIWRT
SIO_010081: LIX00_RS25825
subclass of: SO_0000673
so part of: LIX00_RS25825
location: 4483..6252
location: region:4483-6252:1
so has part: feature:4483-6252:1:exon

WP_227357696.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4483-6252:1:exon

LIX00_RS25830
type: Gene
subclass of: SO_0000704
RO_0002162: 2884876
locus tag: LIX00_RS25830
so part of: sequence
location: complement(6274..8136)
location: region:6274-8136:-1
so has part: feature:6274-8136:-1:exon
subclass of: SO_0000010

68579460
type: Gene
SIO_000068: ncbigene

position:6274:-1
position: 6274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8136:-1
position: 8136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6274-8136:-1:exon

LIX00_RS25830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2884876
locus tag: LIX00_RS25830
inference: COORDINATES: protein motif:HMM:NF024627.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: right-handed parallel beta-helix repeat-containing protein
translation: MGEEIWFTDKAYAEVSTMVADLLASQNDFINKVTAPSSPGTYYEDAPQNAQVTVELPSGAFDHLSADSFDIDGGIDLTDVTGADPLSVASLDSGSVDTEHVANVADYIVGSLSELEAAFANLSNGEIIYIGNEGAPYRTTSWLDVDGVSNVKIVGSGKTDLITVADEAGVGGIRIGNTTQCTDVHVSHVGVDGNKDNQTGTGQNLHGFSIHNGKRITVENCIARNLYPYHEHGTGGSGISVEGPAESVKIHNNWIDNTGDRSIESHGTKYFIASNNLITNGFDRGISVDTGEGYAVVANNLLYNNQDGSCVGLQWEGGTPCQFVVANNTALGDHNRLVQIRRTTAHGAVVGNVGRTTQAITGIKTEPDTGPMTITGNYVEGYTQNGIWLRGEDKVCVGNNVQSIGQAGIAVALEATNHVIANNLVRDTGLETGSNYPGIDVASGASKLLLDGNSVENPTTLCLKFAGTDSTIVNNRVSGGQVGIRADGTADSIIANNSIENNTYRNLELLDATRNLIEGNRVKNKGNTNPTFIEEGTSDNNFWTANYAPDDGNTWSLIGAGSNVQNNRPTAGVDVRNFTTVPNGTKMYHDPTVSGDTNTEGEAQYIGGSWISLVDGSTIA
SIO_010081: LIX00_RS25830
subclass of: SO_0000673
so part of: LIX00_RS25830
location: complement(6274..8136)
location: region:6274-8136:-1
so has part: feature:6274-8136:-1:exon

WP_227357697.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6274-8136:-1:exon

LIX00_RS25835
type: Gene
subclass of: SO_0000704
RO_0002162: 2884876
locus tag: LIX00_RS25835
so part of: sequence
location: 8368..8562
location: region:8368-8562:1
so has part: feature:8368-8562:1:exon
subclass of: SO_0000010

68579461
type: Gene
SIO_000068: ncbigene

position:8368:1
position: 8368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8562:1
position: 8562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8368-8562:1:exon

LIX00_RS25835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2884876
locus tag: LIX00_RS25835
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTHYKAVLQGEGVTCPECGAKNKVPGSFLLEDDSLICPDCEEAIGRTQEKGEPALIRVNKEAKK
SIO_010081: LIX00_RS25835
subclass of: SO_0000673
so part of: LIX00_RS25835
location: 8368..8562
location: region:8368-8562:1
so has part: feature:8368-8562:1:exon

WP_227357698.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8368-8562:1:exon

LIX00_RS25840
type: Gene
subclass of: SO_0000704
RO_0002162: 2884876
locus tag: LIX00_RS25840
so part of: sequence
location: complement(8569..9012)
location: region:8569-9012:-1
so has part: feature:8569-9012:-1:exon
subclass of: SO_0000010

68579462
type: Gene
SIO_000068: ncbigene

position:8569:-1
position: 8569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9012:-1
position: 9012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8569-9012:-1:exon

LIX00_RS25840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2884876
locus tag: LIX00_RS25840
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTKTTQLRVNPPIGGYVIAAMFVLLTILAPISAVNIILSGDLVVGLVMLFIGTPMFAGAAYVCRHFIDDIREYRQWLRVEHQWLYALGVVFRLAFVALVVIGTVVDILYFASPPVQTVILAVGVLAAYSALSVLVSAVGQMLLPGA
SIO_010081: LIX00_RS25840
subclass of: SO_0000673
so part of: LIX00_RS25840
location: complement(8569..9012)
location: region:8569-9012:-1
so has part: feature:8569-9012:-1:exon

WP_227357699.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8569-9012:-1:exon

LIX00_RS25845
type: Gene
subclass of: SO_0000704
RO_0002162: 2884876
locus tag: LIX00_RS25845
so part of: sequence
location: complement(9313..9567)
location: region:9313-9567:-1
so has part: feature:9313-9567:-1:exon
subclass of: SO_0000010

68579463
type: Gene
SIO_000068: ncbigene

position:9313:-1
position: 9313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9567:-1
position: 9567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9313-9567:-1:exon

LIX00_RS25845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2884876
locus tag: LIX00_RS25845
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPSKRSIKKRLENLEDGTTDYKQGNLATWIAAMETDTAGGIVDEEKRLYRYGGQLYQLPKEIVEIAARRSEELENYEPVRGTLE
SIO_010081: LIX00_RS25845
subclass of: SO_0000673
so part of: LIX00_RS25845
location: complement(9313..9567)
location: region:9313-9567:-1
so has part: feature:9313-9567:-1:exon

WP_227357677.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9313-9567:-1:exon

LIX00_RS25850
type: Gene
subclass of: SO_0000704
RO_0002162: 2884876
locus tag: LIX00_RS25850
so part of: sequence
location: complement(9557..9766)
location: region:9557-9766:-1
so has part: feature:9557-9766:-1:exon
subclass of: SO_0000010

68579464
type: Gene
SIO_000068: ncbigene

position:9557:-1
position: 9557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9766:-1
position: 9766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9557-9766:-1:exon

LIX00_RS25850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2884876
locus tag: LIX00_RS25850
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQEQRGDTRLPKVTHMPSKRNIEKRLDNLEQEDVEDMSIAELLSADPNAAGKRLRPETQRKLEEILNAE
SIO_010081: LIX00_RS25850
subclass of: SO_0000673
so part of: LIX00_RS25850
location: complement(9557..9766)
location: region:9557-9766:-1
so has part: feature:9557-9766:-1:exon

WP_227357678.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9557-9766:-1:exon

LIX00_RS25855
type: Gene
subclass of: SO_0000704
RO_0002162: 2884876
locus tag: LIX00_RS25855
so part of: sequence
location: complement(10087..10392)
location: region:10087-10392:-1
so has part: feature:10087-10392:-1:exon
subclass of: SO_0000010

68579465
type: Gene
SIO_000068: ncbigene

position:10087:-1
position: 10087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10392:-1
position: 10392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10087-10392:-1:exon

LIX00_RS25855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2884876
locus tag: LIX00_RS25855
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004958167.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPKSDDTHTNKEEDTGTPGGSEPAAPDRDEILSLLTDGIEEAHRKVTSGRVYDESKEQTRQGWIRVLAYAAGQYRQLVRDKELEQIEERLERLEEAKDGPK
SIO_010081: LIX00_RS25855
subclass of: SO_0000673
so part of: LIX00_RS25855
location: complement(10087..10392)
location: region:10087-10392:-1
so has part: feature:10087-10392:-1:exon

WP_227357679.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10087-10392:-1:exon

LIX00_RS25860
type: Gene
subclass of: SO_0000704
RO_0002162: 2884876
locus tag: LIX00_RS25860
so part of: sequence
location: complement(10419..10937)
location: region:10419-10937:-1
so has part: feature:10419-10937:-1:exon
subclass of: SO_0000010

68579466
type: Gene
SIO_000068: ncbigene

position:10419:-1
position: 10419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10937:-1
position: 10937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10419-10937:-1:exon

LIX00_RS25860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2884876
locus tag: LIX00_RS25860
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSQTTTEDGESIVLEIPRGYAQIGDPTDPAGQQVIDLRDVPTVDGAKHLELPVDSVDVARGLLQEHHPFSVVSDPTDYDLASVKSKVDLRKEKQARRAREMDQKREKKNRGFDPVTDQPSNHRKVKIKKVYNQLVELGEDEKAEKLREISSTPKQNQVARQYAESIDGVAKR
SIO_010081: LIX00_RS25860
subclass of: SO_0000673
so part of: LIX00_RS25860
location: complement(10419..10937)
location: region:10419-10937:-1
so has part: feature:10419-10937:-1:exon

WP_227357680.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10419-10937:-1:exon

LIX00_RS25865
type: Gene
subclass of: SO_0000704
RO_0002162: 2884876
locus tag: LIX00_RS25865
so part of: sequence
location: complement(11389..11790)
location: region:11389-11790:-1
so has part: feature:11389-11790:-1:exon
subclass of: SO_0000010

68579467
type: Gene
SIO_000068: ncbigene

position:11389:-1
position: 11389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11790:-1
position: 11790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11389-11790:-1:exon

LIX00_RS25865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2884876
locus tag: LIX00_RS25865
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MCNHCLQRVRRQYPEYDAACDAYVYENQNHLRWAVAPWSDADPSAHREYDTSGRKVTFCQCGRENGRAADDDYSYSELKERLRCVIDRLTEAGLDMDESVMYEFVEGAKCKRQIGGKDTQILRRATKLGLKHA
SIO_010081: LIX00_RS25865
subclass of: SO_0000673
so part of: LIX00_RS25865
location: complement(11389..11790)
location: region:11389-11790:-1
so has part: feature:11389-11790:-1:exon

WP_227357681.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11389-11790:-1:exon

LIX00_RS25870
type: Gene
subclass of: SO_0000704
RO_0002162: 2884876
locus tag: LIX00_RS25870
so part of: sequence
location: complement(12721..15270)
location: region:12721-15270:-1
so has part: feature:12721-15270:-1:exon
subclass of: SO_0000010

68579468
type: Gene
SIO_000068: ncbigene

position:12721:-1
position: 12721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15270:-1
position: 15270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12721-15270:-1:exon

LIX00_RS25870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2884876
locus tag: LIX00_RS25870
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDRPPHPDTLSFGASAVPDELTERDQWVSWRYQWTPDRDEWSKVPRDVSGGYASSTDADTWTDFDSAVEHYNDHDSDGVGFVVHEDGIVAGVDLDGCRDPQTGDVDDWATDIIGKLDSYTEVSPSGTGFRVFVLGFKPGDSCKQVMESQFDLEKTSEIEIYDSGRYLTVTGHHVDGTPTSVEQRNSALSDVYEEYMVEDEDEDEESGYGAEPVDVDLEDEEIIQKARNAGNGDDFARLFDCGDTSAHGGDHSRADLALCGHLAFWTGGDRNRIDRLFRQSALMRDKWDEDRGSKTYGELTIDEALKGRTDFYDPSQVATTDGGTAAVSASESFTVGAGDGVRFKDAPAEPVVDDEDRVSIVKPEPGTTDVTVKPIGKWVCQQCGTVSGEHATVGDSVKDPGNCPSCGKSGPWEPVVDDDVPAQFYLQEAWDYPKAVDESDFEELWDDVRQYIYDHWDAGANNGHIYDGLTAYALSTWLRPDLDFVPHIMLMGRYTGGKTRLLNTLSRLSYRCIVSASASPSSMFRLIDAYDTTFFVSEYHGLDPDTRRELDAVVRAAQKRGETVTRSVQMDGGGFEPEVLDPFTHVAVATQYEPADDIVSRCIEVKTSPATREMPPTLDDERATSIRNRLLYARFRLLGSNRIKIAKTNAYEYLAEHEIDGRLREKLLSALMIADIWGDVGMMDDFVDYLVSATKQAEAKSEDAIFTEAVRDLAFESVGRSSFDDPDTNPFGDVEIPYSDIADRFNDISGQDRSNSWIGHVVSRHNFETQRKRDGTVIADPELGEKLQDLCSDYSLGWEPLDSINAVAELDKPYNGQCSACGDTDWIAYEDVEYGDRLCGQCADELRD
SIO_010081: LIX00_RS25870
subclass of: SO_0000673
so part of: LIX00_RS25870
location: complement(12721..15270)
location: region:12721-15270:-1
so has part: feature:12721-15270:-1:exon

WP_227357682.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12721-15270:-1:exon

LIX00_RS26060
type: Gene
subclass of: SO_0000704
RO_0002162: 2884876
locus tag: LIX00_RS26060
so part of: sequence
location: complement(15267..15389)
location: region:15267-15389:-1
so has part: feature:15267-15389:-1:exon
subclass of: SO_0000010

73770813
type: Gene
SIO_000068: ncbigene

position:15267:-1
position: 15267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15389:-1
position: 15389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15267-15389:-1:exon

LIX00_RS26060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2884876
locus tag: LIX00_RS26060
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYENYDDATEFHIDRDDYEPSPSGGYKLVYHIMLGREVAQ
SIO_010081: LIX00_RS26060
subclass of: SO_0000673
so part of: LIX00_RS26060
location: complement(15267..15389)
location: region:15267-15389:-1
so has part: feature:15267-15389:-1:exon

WP_255679384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15267-15389:-1:exon

LIX00_RS25875
type: Gene
subclass of: SO_0000704
RO_0002162: 2884876
locus tag: LIX00_RS25875
so part of: sequence
location: complement(15581..15733)
location: region:15581-15733:-1
so has part: feature:15581-15733:-1:exon
subclass of: SO_0000010

68579469
type: Gene
SIO_000068: ncbigene

position:15581:-1
position: 15581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15733:-1
position: 15733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15581-15733:-1:exon

LIX00_RS25875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2884876
locus tag: LIX00_RS25875
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKATESRIPVSLETRKKLRVLKAQADEPSYDSLLSKIVENDAVEASLTE
SIO_010081: LIX00_RS25875
subclass of: SO_0000673
so part of: LIX00_RS25875
location: complement(15581..15733)
location: region:15581-15733:-1
so has part: feature:15581-15733:-1:exon

WP_227357683.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15581-15733:-1:exon

LIX00_RS25880
type: Gene
subclass of: SO_0000704
RO_0002162: 2884876
locus tag: LIX00_RS25880
so part of: sequence
location: 15835..16497
location: region:15835-16497:1
so has part: feature:15835-16497:1:exon
subclass of: SO_0000010

68579470
type: Gene
SIO_000068: ncbigene

position:15835:1
position: 15835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16497:1
position: 16497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15835-16497:1:exon

LIX00_RS25880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2884876
locus tag: LIX00_RS25880
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLTKKQREFIRGEYEYEGEYASQKRYQQRKAIRERVRNSLYDFTELFEHLDENEREKIFSPPEDEREPLNQALINLVAFLYKETHVTTTLPNFEYYLKSGVRRATYQLAGSDMYDVDVDFEVRRTSPQDVEWDKIEDKIRFRKWDEFTEGELKWFLRYYAKSDEFDPEIAHEEFEKRFEQFVAETQEAGSQKAKASREKQRPRPDPIETLPEEDENAEDE
SIO_010081: LIX00_RS25880
subclass of: SO_0000673
so part of: LIX00_RS25880
location: 15835..16497
location: region:15835-16497:1
so has part: feature:15835-16497:1:exon

WP_227357684.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15835-16497:1:exon

LIX00_RS25885
type: Gene
subclass of: SO_0000704
RO_0002162: 2884876
locus tag: LIX00_RS25885
so part of: sequence
location: 16728..16940
location: region:16728-16940:1
so has part: feature:16728-16940:1:exon
subclass of: SO_0000010

68579471
type: Gene
SIO_000068: ncbigene

position:16728:1
position: 16728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16940:1
position: 16940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16728-16940:1:exon

LIX00_RS25885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 2884876
locus tag: LIX00_RS25885
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKVDVSVGVETPAGPPSIGVRIGLQMFAYGLVIGNMPVAVAGLAIAGTMVYIWLVVKYQVALPKPGGKPK
SIO_010081: LIX00_RS25885
subclass of: SO_0000673
so part of: LIX00_RS25885
location: 16728..16940
location: region:16728-16940:1
so has part: feature:16728-16940:1:exon

WP_227357685.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16728-16940:1:exon