Haladaptatus salinisoli strain PSR8 plasmid unnamed2, complete sequence.
Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Halobacteriales; Haladaptataceae; Haladaptatus.
Halophilic archaea isolated from solar salterns and salt lakes
Submitted (19-OCT-2021) School of Food and Biological Engineering, Jiangsu University, No 301 Xuefu Road, Jingkou District, Zhenjiang, Zhenjiang, Jiangsu 212013, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP085329.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 4\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 387.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 07/30/2023 12:33:03\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,188\nCDSs (total) :: 5,129\nGenes (coding) :: 5,050\nCDSs (with protein) :: 5,050\nGenes (RNA) :: 59\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 51\nncRNAs :: 2\nPseudo Genes (total) :: 79\nCDSs (without protein) :: 79\nPseudo Genes (ambiguous residues) :: 0 of 79\nPseudo Genes (frameshifted) :: 35 of 79\nPseudo Genes (incomplete) :: 59 of 79\nPseudo Genes (internal stop) :: 17 of 79\nPseudo Genes (multiple problems) :: 27 of 79\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_006180944.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007981092.1
COORDINATES: similar to AA sequence:RefSeq:WP_007983166.1
COORDINATES: similar to AA sequence:RefSeq:WP_007983164.1
COORDINATES: similar to AA sequence:RefSeq:WP_004595117.1
COORDINATES: similar to AA sequence:RefSeq:WP_006107229.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006107227.1
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006107226.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006825723.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004595112.1
COORDINATES: similar to AA sequence:RefSeq:WP_006666936.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018128986.1
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
glycoside hydrolase family 3 N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012945538.1
GO:0003824 - catalytic activity [Evidence IEA]
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008892484.1
glycoside hydrolase family 2 TIM barrel-domain containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007983140.1
COORDINATES: similar to AA sequence:RefSeq:WP_008385143.1
COORDINATES: similar to AA sequence:RefSeq:WP_008385141.1
COORDINATES: similar to AA sequence:RefSeq:WP_008385139.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_007983144.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041116.1
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007983125.1
GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004968481.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006884291.1
GO:0046559 - alpha-glucuronidase activity [Evidence IEA]
GO:0045493 - xylan catabolic process [Evidence IEA]
alpha-glucuronidase family glycosyl hydrolase
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: similar to AA sequence:RefSeq:WP_006055877.1
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004977793.1
COORDINATES: protein motif:HMM:NF012706.2
COORDINATES: similar to AA sequence:RefSeq:WP_009377636.1
COORDINATES: similar to AA sequence:RefSeq:WP_008382722.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_015788630.1
GO:0008880 - glucuronate isomerase activity [Evidence IEA]
GO:0006064 - glucuronate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015910937.1
GO:0008927 - mannonate dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013881255.1
COORDINATES: similar to AA sequence:RefSeq:WP_012941368.1
GO:0005375 - copper ion transmembrane transporter activity [Evidence IEA]; GO:0043682 - P-type divalent copper transporter activity [Evidence IEA]
GO:0006825 - copper ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006824126.1
GO:0004474 - malate synthase activity [Evidence IEA]
GO:0006097 - glyoxylate cycle [Evidence IEA]; GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006113813.1
iron-containing alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007261071.1
COORDINATES: similar to AA sequence:RefSeq:WP_006067400.1
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008416698.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014052798.1
COORDINATES: similar to AA sequence:RefSeq:WP_005557429.1
CaiB/BaiF CoA-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006824135.1
enoyl-CoA hydratase/isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006088768.1
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024771.2
COORDINATES: similar to AA sequence:RefSeq:WP_006824144.1
GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
isocitrate/isopropylmalate family dehydrogenase
COORDINATES: protein motif:HMM:NF019310.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008366415.1
COORDINATES: similar to AA sequence:RefSeq:WP_008417185.1
COORDINATES: protein motif:HMM:NF008653.0
COORDINATES: protein motif:HMM:NF024808.2
COORDINATES: similar to AA sequence:RefSeq:WP_007997855.1
FAD-dependent tricarballylate dehydrogenase TcuA
COORDINATES: similar to AA sequence:RefSeq:WP_014052708.1
COORDINATES: protein motif:HMM:NF015905.2
COORDINATES: similar to AA sequence:RefSeq:WP_007977173.1
COORDINATES: protein motif:HMM:NF012678.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014182988.1
isocitrate lyase/phosphoenolpyruvate mutase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007257362.1
COORDINATES: protein motif:HMM:NF013799.2
COORDINATES: similar to AA sequence:RefSeq:WP_008573223.1
COORDINATES: similar to AA sequence:RefSeq:WP_015323418.1
thiamine pyrophosphate-requiring protein
COORDINATES: similar to AA sequence:RefSeq:WP_006092147.1
GO:0019752 - carboxylic acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005557437.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006649562.1
orc1/cdc6 family replication initiation protein
COORDINATES: similar to AA sequence:RefSeq:WP_020512222.1
GO:0030638 - polyketide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014865110.1
COORDINATES: protein motif:HMM:NF016214.2
COORDINATES: similar to AA sequence:RefSeq:WP_008417202.1
COORDINATES: similar to AA sequence:RefSeq:WP_007983374.1
COORDINATES: similar to AA sequence:RefSeq:WP_007975915.1
COORDINATES: protein motif:HMM:NF025627.2
COORDINATES: similar to AA sequence:RefSeq:WP_015763169.1
GO:0004488 - methylenetetrahydrofolate dehydrogenase (NADP+) activity [Evidence IEA]
tetrahydrofolate dehydrogenase/cyclohydrolase catalytic domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006056140.1
COORDINATES: similar to AA sequence:RefSeq:WP_008325138.1
COORDINATES: similar to AA sequence:RefSeq:WP_008385324.1
GO:0046872 - metal ion binding [Evidence IEA]
anthranilate synthase component I family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008385323.1
GO:0046820 - 4-amino-4-deoxychorismate synthase activity [Evidence IEA]; GO:0004049 - anthranilate synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
Members of this family of hydrolases with an active site Cys residue belong to MEROPS family C26; Derived by automated computational analysis using gene prediction method: Protein Homology.
aminodeoxychorismate/anthranilate synthase component II
COORDINATES: similar to AA sequence:RefSeq:WP_004594821.1
GO:0019239 - deaminase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004594823.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
NADH-ubiquinone oxidoreductase-F iron-sulfur binding region domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004061976.1
GO:0009326 - formate dehydrogenase complex [Evidence IEA]
GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007190524.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004329 - formate-tetrahydrofolate ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015321140.1
GO:0004156 - dihydropteroate synthase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014555660.1
COORDINATES: similar to AA sequence:RefSeq:WP_008608059.1
GO:0004372 - glycine hydroxymethyltransferase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0070905 - serine binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0019264 - glycine biosynthetic process from serine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006075885.1
GO:0004489 - methylenetetrahydrofolate reductase (NAD(P)H) activity [Evidence IEA]
GO:0006555 - methionine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007190533.1
COORDINATES: similar to AA sequence:RefSeq:WP_011222752.1
COORDINATES: similar to AA sequence:RefSeq:WP_008385316.1
GO:0004794 - L-threonine ammonia-lyase activity [Evidence IEA]
GO:0006549 - isoleucine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005533017.1
COORDINATES: similar to AA sequence:RefSeq:WP_011571040.1
GO:0071705 - nitrogen compound transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008385297.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012945447.1
COORDINATES: similar to AA sequence:RefSeq:WP_012807854.1
GO:0102662 - malonate-semialdehyde dehydrogenase (acetylating, NAD+) activity [Evidence IEA]
CoA-acylating methylmalonate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_012807853.1
COORDINATES: similar to AA sequence:RefSeq:WP_018256593.1
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018256594.1
COORDINATES: similar to AA sequence:RefSeq:WP_006090490.1
COORDINATES: similar to AA sequence:RefSeq:WP_008388446.1
sugar phosphate isomerase/epimerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012945454.1
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008388451.1
COORDINATES: similar to AA sequence:RefSeq:WP_008388449.1
COORDINATES: protein motif:HMM:NF018944.2
COORDINATES: protein motif:HMM:NF013080.2
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008388448.1
COORDINATES: similar to AA sequence:RefSeq:WP_012807856.1
GO:0008150 - biological_process [Evidence IEA]
TIGR03557 family F420-dependent LLM class oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_018256590.1
COORDINATES: similar to AA sequence:RefSeq:WP_008419857.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008388463.1
GO:0006020 - inositol metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013757.2
COORDINATES: similar to AA sequence:RefSeq:WP_006827395.1
COORDINATES: similar to AA sequence:RefSeq:WP_007693900.1
COORDINATES: similar to AA sequence:RefSeq:WP_004971711.1
COORDINATES: similar to AA sequence:RefSeq:WP_012945547.1
COORDINATES: similar to AA sequence:RefSeq:WP_005556678.1
GO:0008869 - galactonate dehydratase activity [Evidence IEA]
GO:0009063 - amino acid catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007980986.1
COORDINATES: protein motif:HMM:NF016497.2
COORDINATES: similar to AA sequence:RefSeq:WP_008163295.1
COORDINATES: similar to AA sequence:RefSeq:WP_008308924.1
COORDINATES: protein motif:HMM:NF024954.2
COORDINATES: similar to AA sequence:RefSeq:WP_008323620.1
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF027245.2
COORDINATES: similar to AA sequence:RefSeq:WP_014052509.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008443094.1
aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014052506.1
COORDINATES: similar to AA sequence:RefSeq:WP_014052505.1
Lrp/AsnC family transcriptional regulator
COORDINATES: protein motif:HMM:NF012993.2
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
nitrilase-related carbon-nitrogen hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_014052504.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008443088.1
COORDINATES: similar to AA sequence:RefSeq:WP_008443086.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]; GO:0019808 - polyamine binding [Evidence IEA]
GO:0015846 - polyamine transport [Evidence IEA]
spermidine/putrescine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014052501.1
COORDINATES: similar to AA sequence:RefSeq:WP_006091164.1
GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014052499.1
COORDINATES: protein motif:HMM:NF027964.2
saccharopine dehydrogenase NADP-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016357940.1
COORDINATES: similar to AA sequence:RefSeq:WP_012876702.1
COORDINATES: similar to AA sequence:RefSeq:WP_009761551.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
daunorubicin ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF013517.2
GO:0009055 - electron transfer activity [Evidence IEA]
GO:0019646 - aerobic electron transport chain [Evidence IEA]
COORDINATES: protein motif:HMM:NF016831.2
COORDINATES: similar to AA sequence:RefSeq:WP_006078646.1
COORDINATES: similar to AA sequence:RefSeq:WP_006078647.1
alpha-ketoacid dehydrogenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_007983615.1
thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha
COORDINATES: protein motif:HMM:NF021465.2
COORDINATES: similar to AA sequence:RefSeq:WP_007982388.1
COORDINATES: protein motif:HMM:NF022039.2
COORDINATES: similar to AA sequence:RefSeq:WP_013879911.1
glycoside hydrolase family 3 C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006647779.1
COORDINATES: protein motif:HMM:NF012514.2
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014039456.1
COORDINATES: similar to AA sequence:RefSeq:WP_018129139.1
COORDINATES: similar to AA sequence:RefSeq:WP_004518455.1
COORDINATES: similar to AA sequence:RefSeq:WP_007981508.1
GO:0003987 - acetate-CoA ligase activity [Evidence IEA]
GO:0019427 - acetyl-CoA biosynthetic process from acetate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007981506.1
bacterio-opsin activator domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012942183.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055264.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007983401.1
COORDINATES: similar to AA sequence:RefSeq:WP_007981146.1
twin-arginine translocation signal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004213969.1
COORDINATES: similar to AA sequence:RefSeq:WP_008420954.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007539074.1
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005534134.1
COORDINATES: similar to AA sequence:RefSeq:WP_006111014.1
COORDINATES: similar to AA sequence:RefSeq:WP_005249867.1
COORDINATES: protein motif:HMM:NF016300.2
COORDINATES: similar to AA sequence:RefSeq:WP_004062386.1
COORDINATES: similar to AA sequence:RefSeq:WP_008423743.1
GO:0009116 - nucleoside metabolic process [Evidence IEA]
phosphoribosyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004056130.1
COORDINATES: protein motif:HMM:NF012927.2
COORDINATES: similar to AA sequence:RefSeq:WP_008011701.1
COORDINATES: similar to AA sequence:RefSeq:WP_006671995.1
COORDINATES: similar to AA sequence:RefSeq:WP_014250644.1
COORDINATES: similar to AA sequence:RefSeq:WP_008585179.1
COORDINATES: similar to AA sequence:RefSeq:WP_008307154.1
COORDINATES: protein motif:HMM:NF024769.2
COORDINATES: similar to AA sequence:RefSeq:WP_015301927.1
DNA repair and recombination protein RadA
COORDINATES: similar to AA sequence:RefSeq:WP_006087887.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0050898 - nitrile metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006087888.1
GO:0018822 - nitrile hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006087889.1
COORDINATES: protein motif:HMM:NF019135.2
COORDINATES: similar to AA sequence:RefSeq:WP_007694254.1
COORDINATES: similar to AA sequence:RefSeq:WP_012944392.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF036897.2
COORDINATES: similar to AA sequence:RefSeq:WP_009366519.1
GO:0015297 - antiporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF033480.1
bifunctional lysylphosphatidylglycerol flippase/synthetase MprF
COORDINATES: similar to AA sequence:RefSeq:WP_009374636.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF038032.1
COORDINATES: similar to AA sequence:RefSeq:WP_019819538.1
COORDINATES: protein motif:HMM:NF022932.2
COORDINATES: similar to AA sequence:RefSeq:WP_010651298.1
COORDINATES: similar to AA sequence:RefSeq:WP_014030880.1
COORDINATES: similar to AA sequence:RefSeq:WP_007140629.1
COORDINATES: similar to AA sequence:RefSeq:WP_006106783.1
beta galactosidase jelly roll domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008895771.1
COORDINATES: similar to AA sequence:RefSeq:WP_006824337.1
COORDINATES: similar to AA sequence:RefSeq:WP_008418313.1
COORDINATES: similar to AA sequence:RefSeq:WP_007975838.1
COORDINATES: similar to AA sequence:RefSeq:WP_007981501.1
COORDINATES: similar to AA sequence:RefSeq:WP_004518043.1
COORDINATES: similar to AA sequence:RefSeq:WP_009487918.1
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020222632.1
COORDINATES: similar to AA sequence:RefSeq:WP_013035256.1
COORDINATES: protein motif:HMM:NF012796.2
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004215528.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007981113.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0071586 - CAAX-box protein processing [Evidence IEA]
type II CAAX endopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007980805.1
COORDINATES: similar to AA sequence:RefSeq:WP_004054014.1
COORDINATES: similar to AA sequence:RefSeq:WP_006076499.1
COORDINATES: similar to AA sequence:RefSeq:WP_006053330.1
COORDINATES: similar to AA sequence:RefSeq:WP_007742510.1
COORDINATES: similar to AA sequence:RefSeq:WP_007690444.1
COORDINATES: similar to AA sequence:RefSeq:WP_006107317.1
COORDINATES: similar to AA sequence:RefSeq:WP_006107318.1
GO:0004020 - adenylylsulfate kinase activity [Evidence IEA]
GO:0006790 - sulfur compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006107319.1
COORDINATES: similar to AA sequence:RefSeq:WP_018248790.1
GO:0016812 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006664283.1
GO:0008233 - peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007107428.1
COORDINATES: similar to AA sequence:RefSeq:WP_008425938.1
COORDINATES: protein motif:HMM:TIGR01180.1
GO:0030246 - carbohydrate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004967607.1
GO:0019239 - deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004048281.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008382778.1
GO:0004180 - carboxypeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006066097.1
COORDINATES: similar to AA sequence:RefSeq:WP_005557478.1
GO:0043231 - intracellular membrane-bounded organelle [Evidence IEA]
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
CDGSH iron-sulfur domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007260202.1
COORDINATES: similar to AA sequence:RefSeq:WP_008417783.1
COORDINATES: similar to AA sequence:RefSeq:WP_006665339.1
NrpR regulatory domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008417785.1
COORDINATES: similar to AA sequence:RefSeq:WP_006431219.1
COORDINATES: similar to AA sequence:RefSeq:WP_007978515.1
COORDINATES: similar to AA sequence:RefSeq:WP_006600170.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: protein motif:HMM:NF020897.2
COORDINATES: similar to AA sequence:RefSeq:WP_008415360.1
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: protein motif:HMM:NF024092.2
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015299809.1
GO:0022841 - potassium ion leak channel activity [Evidence IEA]
GO:0071805 - potassium ion transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007539826.1
GO:0004601 - peroxidase activity [Evidence IEA]; GO:0051920 - peroxiredoxin activity [Evidence IEA]
GO:0006972 - hyperosmotic response [Evidence IEA]; GO:0033194 - response to hydroperoxide [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006107235.1
COORDINATES: protein motif:HMM:NF024248.2
COORDINATES: protein motif:HMM:NF014080.2
COORDINATES: similar to AA sequence:RefSeq:WP_006114693.1
COORDINATES: similar to AA sequence:RefSeq:WP_006108098.1
COORDINATES: similar to AA sequence:RefSeq:WP_006108099.1
COORDINATES: protein motif:HMM:NF036395.2
COORDINATES: similar to AA sequence:RefSeq:WP_020573730.1
winged helix DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008312629.1
COORDINATES: similar to AA sequence:RefSeq:WP_013440427.1
COORDINATES: similar to AA sequence:RefSeq:WP_005580650.1
COORDINATES: similar to AA sequence:RefSeq:WP_006057128.1
COORDINATES: similar to AA sequence:RefSeq:WP_006057129.1
COORDINATES: similar to AA sequence:RefSeq:WP_006057130.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007983432.1
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
succinylglutamate desuccinylase/aspartoacylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008383757.1
COORDINATES: similar to AA sequence:RefSeq:WP_006057132.1
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: protein motif:HMM:NF019846.2
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007980016.1
COORDINATES: similar to AA sequence:RefSeq:WP_009375964.1
GO:0015293 - symporter activity [Evidence IEA]
bile acid:sodium symporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006089667.1
COORDINATES: protein motif:HMM:NF015338.2
endonuclease/exonuclease/phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009376733.1
COORDINATES: similar to AA sequence:RefSeq:WP_004052716.1
COORDINATES: similar to AA sequence:RefSeq:WP_005042506.1
COORDINATES: similar to AA sequence:RefSeq:WP_008418151.1
COORDINATES: similar to AA sequence:RefSeq:WP_004053671.1
COORDINATES: similar to AA sequence:RefSeq:WP_008324011.1
COORDINATES: similar to AA sequence:RefSeq:WP_010612276.1
COORDINATES: similar to AA sequence:RefSeq:WP_007694796.1
COORDINATES: similar to AA sequence:RefSeq:WP_007983298.1
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009376475.1
COORDINATES: similar to AA sequence:RefSeq:WP_006078969.1
COORDINATES: similar to AA sequence:RefSeq:WP_014863651.1
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004053407.1
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006057134.1
COORDINATES: similar to AA sequence:RefSeq:WP_007741669.1
PGF-CTERM-anchored ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005042284.1
COORDINATES: similar to AA sequence:RefSeq:WP_006077727.1
pyridoxal phosphate-dependent class II aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007737238.1
COORDINATES: similar to AA sequence:RefSeq:WP_007188744.1
NTP transferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009488006.1
GO:0008818 - cobalamin 5'-phosphate synthase activity [Evidence IEA]
adenosylcobinamide-GDP ribazoletransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014732140.1
GO:0016880 - acid-ammonia (or amide) ligase activity [Evidence IEA]
adenosylcobinamide-phosphate synthase CbiB
COORDINATES: similar to AA sequence:RefSeq:WP_006090148.1
COORDINATES: similar to AA sequence:RefSeq:WP_004968290.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008893097.1
GO:0018836 - alkylmercury lyase activity [Evidence IEA]
GO:0046413 - organomercury catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012941370.1
COORDINATES: similar to AA sequence:RefSeq:WP_007979417.1
COORDINATES: similar to AA sequence:RefSeq:WP_012941372.1
COORDINATES: similar to AA sequence:RefSeq:WP_013875932.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004599223.1
COORDINATES: similar to AA sequence:RefSeq:WP_008366683.1
COORDINATES: similar to AA sequence:RefSeq:WP_005557399.1
COORDINATES: similar to AA sequence:RefSeq:WP_006629170.1
COORDINATES: similar to AA sequence:RefSeq:WP_008007015.1
COORDINATES: similar to AA sequence:RefSeq:WP_012944046.1
COORDINATES: similar to AA sequence:RefSeq:WP_004060799.1
COORDINATES: similar to AA sequence:RefSeq:WP_015955889.1
COORDINATES: similar to AA sequence:RefSeq:WP_004967252.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007977619.1
COORDINATES: similar to AA sequence:RefSeq:WP_004060303.1
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_011572177.1
COORDINATES: similar to AA sequence:RefSeq:WP_006109619.1
COORDINATES: similar to AA sequence:RefSeq:WP_007693272.1
COORDINATES: similar to AA sequence:RefSeq:WP_007739559.1
COORDINATES: similar to AA sequence:RefSeq:WP_007978854.1
COORDINATES: similar to AA sequence:RefSeq:WP_007977574.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013879684.1
hypoxanthine/guanine phosphoribosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_008454401.1
COORDINATES: similar to AA sequence:RefSeq:WP_006067397.1
GO:0016746 - acyltransferase activity [Evidence IEA]
GO:0006635 - fatty acid beta-oxidation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011222425.1
COORDINATES: similar to AA sequence:RefSeq:WP_007274517.1
GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007982935.1
COORDINATES: similar to AA sequence:RefSeq:WP_019047135.1
COORDINATES: similar to AA sequence:RefSeq:WP_008417923.1
COORDINATES: similar to AA sequence:RefSeq:WP_008161690.1
GO:0047355 - CDP-glycerol glycerophosphotransferase activity [Evidence IEA]
CDP-glycerol glycerophosphotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006065435.1
COORDINATES: protein motif:HMM:NF015000.2
COORDINATES: similar to AA sequence:RefSeq:WP_015322084.1
COORDINATES: similar to AA sequence:RefSeq:WP_004051039.1
COORDINATES: similar to AA sequence:RefSeq:WP_007981290.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014556669.1
NAD-dependent epimerase/dehydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015909816.1
COORDINATES: similar to AA sequence:RefSeq:WP_007694727.1
COORDINATES: similar to AA sequence:RefSeq:WP_007694732.1
COORDINATES: similar to AA sequence:RefSeq:WP_007694730.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0003979 - UDP-glucose 6-dehydrogenase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014862636.1
COORDINATES: similar to AA sequence:RefSeq:WP_008164715.1
GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA]
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
COORDINATES: similar to AA sequence:RefSeq:WP_014862638.1
COORDINATES: protein motif:HMM:NF024832.2
COORDINATES: similar to AA sequence:RefSeq:WP_004598853.1
COORDINATES: similar to AA sequence:RefSeq:WP_013879867.1
COORDINATES: similar to AA sequence:RefSeq:WP_014051125.1
COORDINATES: protein motif:HMM:NF024777.2
LamG-like jellyroll fold domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006169585.1
COORDINATES: protein motif:HMM:NF013998.2
COORDINATES: similar to AA sequence:RefSeq:WP_008326321.1
COORDINATES: similar to AA sequence:RefSeq:WP_007982230.1
COORDINATES: similar to AA sequence:RefSeq:WP_007982231.1
PQQ-binding-like beta-propeller repeat protein
COORDINATES: similar to AA sequence:RefSeq:WP_007690254.1
NADP-dependent phosphogluconate dehydrogenase
COORDINATES: protein motif:HMM:NF014566.2
COORDINATES: similar to AA sequence:RefSeq:WP_006182460.1
COORDINATES: similar to AA sequence:RefSeq:WP_008527467.1
COORDINATES: similar to AA sequence:RefSeq:WP_007739189.1
COORDINATES: similar to AA sequence:RefSeq:WP_005046500.1
SMP-30/gluconolactonase/LRE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008014663.1
COORDINATES: protein motif:HMM:NF017970.2
COORDINATES: similar to AA sequence:RefSeq:WP_004058323.1
COORDINATES: similar to AA sequence:RefSeq:WP_007921790.1
COORDINATES: similar to AA sequence:RefSeq:WP_007873954.1
COORDINATES: similar to AA sequence:RefSeq:WP_011032453.1
COORDINATES: similar to AA sequence:RefSeq:WP_014732685.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: protein motif:HMM:NF013402.2
COORDINATES: similar to AA sequence:RefSeq:WP_007702716.1
COORDINATES: similar to AA sequence:RefSeq:WP_009374441.1
GO:0030429 - kynureninase activity [Evidence IEA]
GO:0019441 - tryptophan catabolic process to kynurenine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004052099.1
BtrH N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007981124.1
COORDINATES: similar to AA sequence:RefSeq:WP_007980061.1
GO:0004834 - tryptophan synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012596.2
COORDINATES: similar to AA sequence:RefSeq:WP_007108293.1
COORDINATES: similar to AA sequence:RefSeq:WP_015763743.1
MaoC/PaaZ C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006652962.1
COORDINATES: similar to AA sequence:RefSeq:WP_015301704.1
COORDINATES: similar to AA sequence:RefSeq:WP_020666767.1
GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_008388783.1
GO:0016405 - CoA-ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007975917.1
COORDINATES: similar to AA sequence:RefSeq:WP_008524566.1
COORDINATES: similar to AA sequence:RefSeq:WP_007981358.1
COORDINATES: similar to AA sequence:RefSeq:WP_007981359.1
COORDINATES: similar to AA sequence:RefSeq:WP_006107320.1
COORDINATES: similar to AA sequence:RefSeq:WP_007142253.1
GO:0016811 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [Evidence IEA]
COORDINATES: protein motif:HMM:NF012311.2
COORDINATES: similar to AA sequence:RefSeq:WP_007977760.1
COORDINATES: similar to AA sequence:RefSeq:WP_006092086.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008367855.1
selenium cofactor biosynthesis protein YqeC
COORDINATES: similar to AA sequence:RefSeq:WP_004516235.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0061603 - molybdenum cofactor guanylyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008896279.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016625 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor [Evidence IEA]
aldehyde ferredoxin oxidoreductase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007694054.1
COORDINATES: similar to AA sequence:RefSeq:WP_009366650.1
COORDINATES: similar to AA sequence:RefSeq:WP_007261623.1
COORDINATES: similar to AA sequence:RefSeq:WP_006167690.1
GO:0004096 - catalase activity [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: protein motif:HMM:NF012425.2
GO:0004096 - catalase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006076530.1
COORDINATES: similar to AA sequence:RefSeq:WP_006824551.1
COORDINATES: similar to AA sequence:RefSeq:WP_005043054.1
COORDINATES: similar to AA sequence:RefSeq:WP_007983406.1
COORDINATES: similar to AA sequence:RefSeq:WP_007983409.1
COORDINATES: similar to AA sequence:RefSeq:WP_007983411.1
COORDINATES: similar to AA sequence:RefSeq:WP_008326732.1
COORDINATES: similar to AA sequence:RefSeq:WP_007980847.1
COORDINATES: similar to AA sequence:RefSeq:WP_007980848.1
COORDINATES: similar to AA sequence:RefSeq:WP_007980849.1
serine hydrolase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007980850.1
COORDINATES: similar to AA sequence:RefSeq:WP_009675578.1
COORDINATES: similar to AA sequence:RefSeq:WP_006076152.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007980854.1
COORDINATES: similar to AA sequence:RefSeq:WP_007980856.1
COORDINATES: similar to AA sequence:RefSeq:WP_007980858.1
COORDINATES: similar to AA sequence:RefSeq:WP_007980860.1
COORDINATES: similar to AA sequence:RefSeq:WP_018129018.1
COORDINATES: similar to AA sequence:RefSeq:WP_007980865.1
COORDINATES: similar to AA sequence:RefSeq:WP_007980867.1
COORDINATES: similar to AA sequence:RefSeq:WP_007980871.1
COORDINATES: similar to AA sequence:RefSeq:WP_012807590.1
COORDINATES: similar to AA sequence:RefSeq:WP_006077703.1
COORDINATES: similar to AA sequence:RefSeq:WP_007980877.1
COORDINATES: similar to AA sequence:RefSeq:WP_007980879.1
COORDINATES: similar to AA sequence:RefSeq:WP_007980881.1
COORDINATES: similar to AA sequence:RefSeq:WP_006165968.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_005043281.1
COORDINATES: similar to AA sequence:RefSeq:WP_007980887.1
COORDINATES: similar to AA sequence:RefSeq:WP_008446347.1