Haladaptatus salinisoli strain PSR8 plasmid unnamed1, complete sequence.
Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Halobacteriales; Haladaptataceae; Haladaptatus.
Halophilic archaea isolated from solar salterns and salt lakes
Submitted (19-OCT-2021) School of Food and Biological Engineering, Jiangsu University, No 301 Xuefu Road, Jingkou District, Zhenjiang, Zhenjiang, Jiangsu 212013, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP085328.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 4\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 387.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 07/30/2023 12:33:03\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,188\nCDSs (total) :: 5,129\nGenes (coding) :: 5,050\nCDSs (with protein) :: 5,050\nGenes (RNA) :: 59\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 51\nncRNAs :: 2\nPseudo Genes (total) :: 79\nCDSs (without protein) :: 79\nPseudo Genes (ambiguous residues) :: 0 of 79\nPseudo Genes (frameshifted) :: 35 of 79\nPseudo Genes (incomplete) :: 59 of 79\nPseudo Genes (internal stop) :: 17 of 79\nPseudo Genes (multiple problems) :: 27 of 79\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_007981367.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007981365.1
COORDINATES: similar to AA sequence:RefSeq:WP_007992457.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006092954.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014732601.1
orc1/cdc6 family replication initiation protein
COORDINATES: similar to AA sequence:RefSeq:WP_007981361.1
COORDINATES: similar to AA sequence:RefSeq:WP_007975914.1
COORDINATES: similar to AA sequence:RefSeq:WP_007981357.1
COORDINATES: similar to AA sequence:RefSeq:WP_007981532.1
COORDINATES: similar to AA sequence:RefSeq:WP_007983063.1
COORDINATES: similar to AA sequence:RefSeq:WP_007981536.1
winged helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF019949.2
COORDINATES: similar to AA sequence:RefSeq:WP_007978070.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_014051874.1
GO:0005507 - copper ion binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
plastocyanin/azurin family copper-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014050799.1
TFIIB-type zinc ribbon-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006054393.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007978165.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0071586 - CAAX-box protein processing [Evidence IEA]
type II CAAX endopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007980991.1
COORDINATES: similar to AA sequence:RefSeq:WP_007980990.1
COORDINATES: similar to AA sequence:RefSeq:WP_008326477.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005041547.1
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008442784.1
GO:0003824 - catalytic activity [Evidence IEA]
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004216596.1
COORDINATES: similar to AA sequence:RefSeq:WP_007187735.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013875691.1
COORDINATES: similar to AA sequence:RefSeq:WP_008523506.1
GO:0008927 - mannonate dehydratase activity [Evidence IEA]
GO:0006064 - glucuronate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020222075.1
COORDINATES: similar to AA sequence:RefSeq:WP_008413943.1
COORDINATES: similar to AA sequence:RefSeq:WP_007139994.1
COORDINATES: similar to AA sequence:RefSeq:WP_006433145.1
COORDINATES: similar to AA sequence:RefSeq:WP_006667828.1
COORDINATES: similar to AA sequence:RefSeq:WP_008388376.1
COORDINATES: similar to AA sequence:RefSeq:WP_013879701.1
COORDINATES: similar to AA sequence:RefSeq:WP_004956875.1
COORDINATES: similar to AA sequence:RefSeq:WP_005041518.1
COORDINATES: protein motif:HMM:NF018682.2
four-carbon acid sugar kinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005041612.1
COORDINATES: similar to AA sequence:RefSeq:WP_005558275.1
GO:0050570 - 4-hydroxythreonine-4-phosphate dehydrogenase activity [Evidence IEA]
GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
4-hydroxythreonine-4-phosphate dehydrogenase PdxA
COORDINATES: similar to AA sequence:RefSeq:WP_008582223.1
COORDINATES: similar to AA sequence:RefSeq:WP_020221836.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020221837.1
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005046732.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004968817.1
COORDINATES: similar to AA sequence:RefSeq:WP_004055941.1
COORDINATES: protein motif:HMM:NF024241.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006824210.1
GO:0009436 - glyoxylate catabolic process [Evidence IEA]; GO:0071704 - organic substance metabolic process [Evidence IEA]
dihydrodipicolinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006089592.1
COORDINATES: protein motif:HMM:NF012346.2
COORDINATES: similar to AA sequence:RefSeq:WP_008388388.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005041596.1
COORDINATES: similar to AA sequence:RefSeq:WP_004968622.1
COORDINATES: similar to AA sequence:RefSeq:WP_004968623.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: similar to AA sequence:RefSeq:WP_005536378.1
COORDINATES: protein motif:HMM:NF028222.2
COORDINATES: similar to AA sequence:RefSeq:WP_004968610.1
COORDINATES: similar to AA sequence:RefSeq:WP_004971539.1
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012945510.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041203.1
COORDINATES: similar to AA sequence:RefSeq:WP_006651823.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016625 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor [Evidence IEA]
aldehyde ferredoxin oxidoreductase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005556464.1
COORDINATES: similar to AA sequence:RefSeq:WP_007690026.1
COORDINATES: similar to AA sequence:RefSeq:WP_008418909.1
COORDINATES: similar to AA sequence:RefSeq:WP_006180591.1
COORDINATES: similar to AA sequence:RefSeq:WP_007981108.1
COORDINATES: similar to AA sequence:RefSeq:WP_007981106.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056169.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006825730.1
COORDINATES: similar to AA sequence:RefSeq:WP_007981392.1
COORDINATES: protein motif:HMM:NF024753.2
PQQ-binding-like beta-propeller repeat protein
COORDINATES: protein motif:HMM:NF019013.2
COORDINATES: similar to AA sequence:RefSeq:WP_006064600.1
COORDINATES: similar to AA sequence:RefSeq:WP_012942237.1
methyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006825752.1
COORDINATES: similar to AA sequence:RefSeq:WP_007975923.1
TrmB family transcriptional regulator sugar-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007975927.1
COORDINATES: similar to AA sequence:RefSeq:WP_004059175.1
COORDINATES: similar to AA sequence:RefSeq:WP_004041131.1
COORDINATES: similar to AA sequence:RefSeq:WP_004516364.1
COORDINATES: similar to AA sequence:RefSeq:WP_014864346.1
COORDINATES: similar to AA sequence:RefSeq:WP_005044337.1
COORDINATES: similar to AA sequence:RefSeq:WP_007142028.1
COORDINATES: similar to AA sequence:RefSeq:WP_015320378.1
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
nucleotidyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014039822.1
COORDINATES: similar to AA sequence:RefSeq:WP_008310257.1
COORDINATES: similar to AA sequence:RefSeq:WP_007541191.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056037.1
COORDINATES: similar to AA sequence:RefSeq:WP_008097104.1
GO:0050334 - thiaminase activity [Evidence IEA]
GO:0006772 - thiamine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009376824.1
COORDINATES: protein motif:HMM:NF019928.2
COORDINATES: similar to AA sequence:RefSeq:WP_008389000.1
NAD(P)-binding domain-containing protein
COORDINATES: protein motif:HMM:NF024953.2
COORDINATES: protein motif:HMM:NF015651.2
lysylphosphatidylglycerol synthase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007980516.1
COORDINATES: similar to AA sequence:RefSeq:WP_018129138.1
COORDINATES: protein motif:HMM:NF019500.2
COORDINATES: similar to AA sequence:RefSeq:WP_006433244.1
COORDINATES: similar to AA sequence:RefSeq:WP_003884240.1
nuclear transport factor 2 family protein
COORDINATES: protein motif:HMM:NF021759.2
COORDINATES: similar to AA sequence:RefSeq:WP_007981006.1
COORDINATES: similar to AA sequence:RefSeq:WP_013879090.1
four-helix bundle copper-binding protein
COORDINATES: protein motif:HMM:NF024804.2
winged helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF024248.2
COORDINATES: similar to AA sequence:RefSeq:WP_007980753.1
COORDINATES: similar to AA sequence:RefSeq:WP_007980578.1
COORDINATES: similar to AA sequence:RefSeq:WP_007980713.1
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004048645.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019829 - ATPase-coupled monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009378262.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008414035.1
GO:0046872 - metal ion binding [Evidence IEA]
heavy-metal-associated domain-containing protein
COORDINATES: protein motif:HMM:NF012780.2
COORDINATES: similar to AA sequence:RefSeq:WP_013879093.1
vitamin K epoxide reductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007691183.1
COORDINATES: similar to AA sequence:RefSeq:WP_006185301.1
COORDINATES: similar to AA sequence:RefSeq:WP_007107418.1
COORDINATES: protein motif:HMM:NF012355.2
COORDINATES: similar to AA sequence:RefSeq:WP_006432610.1
COORDINATES: similar to AA sequence:RefSeq:WP_007982608.1
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004048641.1
COORDINATES: similar to AA sequence:RefSeq:WP_008385346.1
COORDINATES: similar to AA sequence:RefSeq:WP_005039560.1
COORDINATES: similar to AA sequence:RefSeq:WP_012876471.1
GO:0004497 - monooxygenase activity [Evidence IEA]
GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
demethoxyubiquinone hydroxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008323580.1
GO:0046873 - metal ion transmembrane transporter activity [Evidence IEA]
GO:0030001 - metal ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007259193.1
COORDINATES: similar to AA sequence:RefSeq:WP_005040643.1
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004048321.1
COORDINATES: similar to AA sequence:RefSeq:WP_004596952.1
COORDINATES: similar to AA sequence:RefSeq:WP_007979199.1
COORDINATES: similar to AA sequence:RefSeq:WP_008418135.1
COORDINATES: similar to AA sequence:RefSeq:WP_006054636.1
YeeE/YedE thiosulfate transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006652834.1
COORDINATES: similar to AA sequence:RefSeq:WP_004043577.1
COORDINATES: similar to AA sequence:RefSeq:WP_007689849.1
COORDINATES: similar to AA sequence:RefSeq:WP_012945356.1
COORDINATES: similar to AA sequence:RefSeq:WP_014031063.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004960920.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF036897.2
COORDINATES: similar to AA sequence:RefSeq:WP_014863928.1
rhodanese-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011322746.1
COORDINATES: similar to AA sequence:RefSeq:WP_007981003.1
putative phosphoglycerol geranylgeranyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_008322152.1
COORDINATES: protein motif:HMM:NF021897.2
type IV secretion system DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF019474.2
GO:0016787 - hydrolase activity [Evidence IEA]
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015320130.1
COORDINATES: protein motif:HMM:NF016831.2
COORDINATES: similar to AA sequence:RefSeq:WP_007979241.1
COORDINATES: similar to AA sequence:RefSeq:WP_008524319.1
COORDINATES: similar to AA sequence:RefSeq:WP_006886021.1
COORDINATES: similar to AA sequence:RefSeq:WP_004059853.1
COORDINATES: similar to AA sequence:RefSeq:WP_007739469.1
COORDINATES: similar to AA sequence:RefSeq:WP_007981530.1
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008385061.1
COORDINATES: similar to AA sequence:RefSeq:WP_008385063.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005043748.1
COORDINATES: similar to AA sequence:RefSeq:WP_008386644.1
COORDINATES: similar to AA sequence:RefSeq:WP_015762189.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004054244.1
COORDINATES: similar to AA sequence:RefSeq:WP_012819356.1
COORDINATES: similar to AA sequence:RefSeq:WP_006827634.1
GO:0008150 - biological_process [Evidence IEA]
TIGR03557 family F420-dependent LLM class oxidoreductase
COORDINATES: protein motif:HMM:NF040426.1
COORDINATES: similar to AA sequence:RefSeq:WP_008096531.1
COORDINATES: similar to AA sequence:RefSeq:WP_009365535.1
COORDINATES: similar to AA sequence:RefSeq:WP_007981869.1
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: similar to AA sequence:RefSeq:WP_008894501.1
endonuclease/exonuclease/phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013880648.1
COORDINATES: similar to AA sequence:RefSeq:WP_008422487.1
COORDINATES: similar to AA sequence:RefSeq:WP_009760804.1
COORDINATES: similar to AA sequence:RefSeq:WP_008524905.1
COORDINATES: similar to AA sequence:RefSeq:WP_020222877.1
COORDINATES: similar to AA sequence:RefSeq:WP_008413753.1
GO:0018784 - (S)-2-haloacid dehalogenase activity [Evidence IEA]
GO:0006805 - xenobiotic metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006660635.1
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
nitrilase-related carbon-nitrogen hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_004044383.1
GO:0015385 - sodium:proton antiporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012795433.1
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: similar to AA sequence:RefSeq:WP_014051011.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: protein motif:HMM:NF024212.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015911463.1
COORDINATES: protein motif:HMM:NF014684.2
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
branched-chain amino acid ABC transporter permease
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: similar to AA sequence:RefSeq:WP_015911459.1
COORDINATES: protein motif:HMM:NF013584.2
COORDINATES: similar to AA sequence:RefSeq:WP_006091315.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024850.2
COORDINATES: similar to AA sequence:RefSeq:WP_004214491.1
COORDINATES: similar to AA sequence:RefSeq:WP_007694234.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006114773.1
COORDINATES: similar to AA sequence:RefSeq:WP_006114772.1
CaiB/BaiF CoA-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006114771.1
COORDINATES: similar to AA sequence:RefSeq:WP_014050745.1
COORDINATES: similar to AA sequence:RefSeq:WP_014050746.1
COORDINATES: similar to AA sequence:RefSeq:WP_014050747.1
COORDINATES: similar to AA sequence:RefSeq:WP_014052710.1
GO:0047420 - N-acyl-D-amino-acid deacylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012945871.1
COORDINATES: similar to AA sequence:RefSeq:WP_007693661.1
Members of the Solute:Sodium Symporter (SSS), TC 2.A.21 as described in tcdb.org, catalyze solute:Na+ symport. Known solutes for members of the family include sugars, amino acids, nucleosides, inositols, vitamins, urea or anions, depending on the system.; Members of the Solute:Sodium Symporter (SSS), TC 2.A.21 as described in tcdb.org, catalyze solute:Na+ symport. Known solutes for members of the family include sugars, amino acids, nucleosides, inositols, vitamins, urea or anions, depending on the system; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007693655.1
COORDINATES: similar to AA sequence:RefSeq:WP_006055174.1
GO:0004180 - carboxypeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007693659.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
GO:0045227 - capsule polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008413916.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
glycerol dehydratase reactivase beta/small subunit family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006168927.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009367722.1
COORDINATES: similar to AA sequence:RefSeq:WP_009367721.1
COORDINATES: similar to AA sequence:RefSeq:WP_009287083.1
GO:0016740 - transferase activity [Evidence IEA]
GO:0019475 - L-lysine catabolic process to acetate [Evidence IEA]
3-keto-5-aminohexanoate cleavage protein
COORDINATES: similar to AA sequence:RefSeq:WP_006108714.1
COORDINATES: similar to AA sequence:RefSeq:WP_006053361.1
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006053362.1
COORDINATES: similar to AA sequence:RefSeq:WP_006053363.1
GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006053356.1
COORDINATES: similar to AA sequence:RefSeq:WP_006430170.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO:0006542 - glutamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007870293.1
COORDINATES: similar to AA sequence:RefSeq:WP_006166030.1
sugar ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004214389.1
COORDINATES: similar to AA sequence:RefSeq:WP_006653015.1
COORDINATES: similar to AA sequence:RefSeq:WP_006653009.1
COORDINATES: similar to AA sequence:RefSeq:WP_006166033.1
COORDINATES: similar to AA sequence:RefSeq:WP_004968413.1
carbon-nitrogen hydrolase family protein
COORDINATES: protein motif:HMM:NF022932.2
COORDINATES: protein motif:HMM:NF015210.2
COORDINATES: protein motif:HMM:NF019348.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004599399.1
COORDINATES: protein motif:HMM:NF016358.2
COORDINATES: protein motif:HMM:NF018357.2
COORDINATES: protein motif:HMM:NF016724.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04474.1
COORDINATES: similar to AA sequence:RefSeq:WP_006078724.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006078726.1
COORDINATES: similar to AA sequence:RefSeq:WP_006183604.1
COORDINATES: similar to AA sequence:RefSeq:WP_007975933.1
COORDINATES: similar to AA sequence:RefSeq:WP_007975929.1
COORDINATES: similar to AA sequence:RefSeq:WP_004060156.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]
PEP/pyruvate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006824281.1
COORDINATES: similar to AA sequence:RefSeq:WP_007694263.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006078519.1
COORDINATES: similar to AA sequence:RefSeq:WP_006078520.1
COORDINATES: similar to AA sequence:RefSeq:WP_004216118.1
COORDINATES: similar to AA sequence:RefSeq:WP_005555604.1
COORDINATES: similar to AA sequence:RefSeq:WP_015233647.1
COORDINATES: similar to AA sequence:RefSeq:WP_007981986.1
COORDINATES: similar to AA sequence:RefSeq:WP_015320567.1
COORDINATES: similar to AA sequence:RefSeq:WP_015301816.1
bacterio-opsin activator domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007696895.1
COORDINATES: similar to AA sequence:RefSeq:WP_008574260.1
GO:0006006 - glucose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008606247.1
GO:0016301 - kinase activity [Evidence IEA]; GO:0022877 - protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004043439.1
GO:0008965 - phosphoenolpyruvate-protein phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
phosphoenolpyruvate--protein phosphotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009377794.1
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006667754.1
GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009377792.1
COORDINATES: similar to AA sequence:RefSeq:WP_009377790.1
GO:0008662 - 1-phosphofructokinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008524566.1
COORDINATES: similar to AA sequence:RefSeq:WP_012876772.1
COORDINATES: protein motif:HMM:TIGR02928.1
COORDINATES: similar to AA sequence:RefSeq:WP_007143114.1
COORDINATES: similar to AA sequence:RefSeq:WP_006090078.1
COORDINATES: similar to AA sequence:RefSeq:WP_006166239.1
COORDINATES: similar to AA sequence:RefSeq:WP_014557034.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890438.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890437.1
COORDINATES: similar to AA sequence:RefSeq:WP_007979302.1
COORDINATES: protein motif:HMM:NF012296.2
GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007188884.1
ribosome biogenesis/translation initiation ATPase RLI
COORDINATES: similar to AA sequence:RefSeq:WP_015323220.1
COORDINATES: similar to AA sequence:RefSeq:WP_008388086.1
COORDINATES: similar to AA sequence:RefSeq:WP_019991929.1
COORDINATES: similar to AA sequence:RefSeq:WP_008388091.1
COORDINATES: similar to AA sequence:RefSeq:WP_008388092.1
COORDINATES: similar to AA sequence:RefSeq:WP_012944038.1
GO:0070403 - NAD+ binding [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007260856.1
beta-ketoacyl synthase N-terminal-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008892394.1
Zn-ribbon domain-containing OB-fold protein
COORDINATES: similar to AA sequence:RefSeq:WP_006107365.1
COORDINATES: similar to AA sequence:RefSeq:WP_007694507.1
COORDINATES: similar to AA sequence:RefSeq:WP_008422441.1
COORDINATES: protein motif:HMM:NF013226.2
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007693979.1
COORDINATES: similar to AA sequence:RefSeq:WP_008388526.1
COORDINATES: similar to AA sequence:RefSeq:WP_006823987.1
COORDINATES: similar to AA sequence:RefSeq:WP_012941225.1
COORDINATES: similar to AA sequence:RefSeq:WP_007276358.1
COORDINATES: similar to AA sequence:RefSeq:WP_007276359.1
COORDINATES: similar to AA sequence:RefSeq:WP_008385768.1
GO:0016790 - thiolester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004967944.1
COORDINATES: similar to AA sequence:RefSeq:WP_008388533.1
amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015860942.1
COORDINATES: similar to AA sequence:RefSeq:WP_007276355.1
COORDINATES: similar to AA sequence:RefSeq:WP_008384951.1
thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_006107361.1
alpha-ketoacid dehydrogenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_007701724.1
nucleoside recognition domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008385165.1
COORDINATES: similar to AA sequence:RefSeq:WP_006823980.1
COORDINATES: similar to AA sequence:RefSeq:WP_006667524.1
COORDINATES: similar to AA sequence:RefSeq:WP_006823978.1
COORDINATES: protein motif:HMM:NF012791.2
COORDINATES: similar to AA sequence:RefSeq:WP_008892429.1
COORDINATES: similar to AA sequence:RefSeq:WP_006107235.1
COORDINATES: similar to AA sequence:RefSeq:WP_006825820.1
COORDINATES: similar to AA sequence:RefSeq:WP_004595762.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013080.2
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013429.2
GO:0016853 - isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008309955.1
COORDINATES: similar to AA sequence:RefSeq:WP_016483519.1
COORDINATES: similar to AA sequence:RefSeq:WP_020599851.1
sugar phosphate isomerase/epimerase family protein
COORDINATES: protein motif:HMM:NF013909.2
Nif3-like dinuclear metal center hexameric protein
COORDINATES: protein motif:HMM:NF013256.2
COORDINATES: protein motif:HMM:NF024240.2
COORDINATES: similar to AA sequence:RefSeq:WP_008452592.1
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005044989.1
GO:0032559 - adenyl ribonucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004594872.1
COORDINATES: similar to AA sequence:RefSeq:WP_006667738.1
COORDINATES: similar to AA sequence:RefSeq:WP_008415125.1
COORDINATES: similar to AA sequence:RefSeq:WP_015788904.1
COORDINATES: protein motif:HMM:NF018944.2
COORDINATES: protein motif:HMM:NF012706.2
COORDINATES: similar to AA sequence:RefSeq:WP_012807593.1
COORDINATES: similar to AA sequence:RefSeq:WP_008895709.1
COORDINATES: similar to AA sequence:RefSeq:WP_007983089.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005043273.1
COORDINATES: similar to AA sequence:RefSeq:WP_008311931.1
class II aldolase/adducin family protein
COORDINATES: protein motif:HMM:NF013353.2
GO:0036361 - racemase activity, acting on amino acids and derivatives [Evidence IEA]
aspartate/glutamate racemase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006883159.1
COORDINATES: similar to AA sequence:RefSeq:WP_012945498.1
COORDINATES: similar to AA sequence:RefSeq:WP_008895740.1
GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007692706.1
COORDINATES: similar to AA sequence:RefSeq:WP_007983325.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:1905887 - autoinducer AI-2 transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004060470.1
COORDINATES: similar to AA sequence:RefSeq:WP_009367660.1
COORDINATES: similar to AA sequence:RefSeq:WP_009367662.1
COORDINATES: similar to AA sequence:RefSeq:WP_006181808.1
COORDINATES: similar to AA sequence:RefSeq:WP_004060471.1
COORDINATES: similar to AA sequence:RefSeq:WP_006179308.1
COORDINATES: protein motif:HMM:NF013740.2
COORDINATES: similar to AA sequence:RefSeq:WP_006088398.1
COORDINATES: similar to AA sequence:RefSeq:WP_007702294.1
COORDINATES: similar to AA sequence:RefSeq:WP_006088396.1
COORDINATES: similar to AA sequence:RefSeq:WP_006088395.1
COORDINATES: similar to AA sequence:RefSeq:WP_007274384.1
COORDINATES: similar to AA sequence:RefSeq:WP_007258140.1
COORDINATES: similar to AA sequence:RefSeq:WP_007188057.1
COORDINATES: similar to AA sequence:RefSeq:WP_006068071.1
COORDINATES: similar to AA sequence:RefSeq:WP_007979262.1
COORDINATES: similar to AA sequence:RefSeq:WP_012289554.1
GO:0008233 - peptidase activity [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0018142 - protein-DNA covalent cross-linking [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004050990.1
COORDINATES: similar to AA sequence:RefSeq:WP_015790712.1
COORDINATES: protein motif:HMM:NF014000.2
COORDINATES: similar to AA sequence:RefSeq:WP_003444631.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007983572.1
COORDINATES: similar to AA sequence:RefSeq:WP_015319734.1
COORDINATES: protein motif:HMM:NF027245.2
COORDINATES: similar to AA sequence:RefSeq:WP_012944843.1
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004048273.1
COORDINATES: similar to AA sequence:RefSeq:WP_018258797.1
GO:0006817 - phosphate ion transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007260350.1
COORDINATES: protein motif:HMM:NF020976.2
COORDINATES: protein motif:HMM:NF014325.2
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF018893.2
COORDINATES: similar to AA sequence:RefSeq:WP_006127826.1
COORDINATES: protein motif:HMM:NF012774.2
COORDINATES: similar to AA sequence:RefSeq:WP_008416582.1
COORDINATES: protein motif:HMM:NF037740.2
COORDINATES: protein motif:HMM:NF016362.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]
GO:0009307 - DNA restriction-modification system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007979268.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: similar to AA sequence:RefSeq:WP_007976065.1
COORDINATES: similar to AA sequence:RefSeq:WP_008325403.1
COORDINATES: similar to AA sequence:RefSeq:WP_006667126.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - DNA transposition [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007981203.1
COORDINATES: similar to AA sequence:RefSeq:WP_008445016.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012655.2
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008418092.1
COORDINATES: protein motif:HMM:NF013245.2
COORDINATES: similar to AA sequence:RefSeq:WP_006112521.1
COORDINATES: protein motif:HMM:NF039977.1
COORDINATES: similar to AA sequence:RefSeq:WP_018332567.1
GO:0070967 - coenzyme F420 binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
PPOX class F420-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_004061954.1
internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.