Haladaptatus halobius strain PSR5 plasmid unnamed4, complete sequence.
Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Halobacteriales; Haladaptataceae; Haladaptatus.
Halophilic archaea isolated from solar salterns and salt lakes
Submitted (19-OCT-2021) School of Food and Biological Engineering, Jiangsu University, No 301 Xuefu Road, Jingkou District, Zhenjiang, Zhenjiang, Jiangsu 212013, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP085340.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: FALCON v. 3\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 156.0x\nSequencing Technology :: Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 07/30/2023 13:46:35\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 7,673\nCDSs (total) :: 7,610\nGenes (coding) :: 7,335\nCDSs (with protein) :: 7,335\nGenes (RNA) :: 63\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 55\nncRNAs :: 2\nPseudo Genes (total) :: 275\nCDSs (without protein) :: 275\nPseudo Genes (ambiguous residues) :: 0 of 275\nPseudo Genes (frameshifted) :: 105 of 275\nPseudo Genes (incomplete) :: 162 of 275\nPseudo Genes (internal stop) :: 105 of 275\nPseudo Genes (multiple problems) :: 82 of 275\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
response regulator of citrate/malate metabolism
COORDINATES: similar to AA sequence:RefSeq:WP_008576013.1
internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006432009.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006091288.1
COORDINATES: similar to AA sequence:RefSeq:WP_004043216.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006432011.1
COORDINATES: similar to AA sequence:RefSeq:WP_004043218.1
COORDINATES: protein motif:HMM:NF012346.2
COORDINATES: similar to AA sequence:RefSeq:WP_006432015.1
COORDINATES: similar to AA sequence:RefSeq:WP_008165083.1
COORDINATES: similar to AA sequence:RefSeq:WP_008385889.1
COORDINATES: similar to AA sequence:RefSeq:WP_011491422.1
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007979291.1
COORDINATES: similar to AA sequence:RefSeq:WP_015260245.1
COORDINATES: similar to AA sequence:RefSeq:WP_013126300.1
COORDINATES: protein motif:HMM:NF021759.2
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007981499.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014864301.1
COORDINATES: similar to AA sequence:RefSeq:WP_007981530.1
COORDINATES: similar to AA sequence:RefSeq:WP_006182459.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0015499 - formate transmembrane transporter activity [Evidence IEA]
GO:0015724 - formate transport [Evidence IEA]
formate/nitrite transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012289080.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012944843.1
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF025627.2
COORDINATES: similar to AA sequence:RefSeq:WP_008326412.1
GO:0004062 - aryl sulfotransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007981152.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007981356.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
DNA polymerase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020222632.1
COORDINATES: protein motif:HMM:NF024910.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007694497.1
COORDINATES: similar to AA sequence:RefSeq:WP_007975928.1
COORDINATES: similar to AA sequence:RefSeq:WP_012944245.1
GO:0008441 - 3'(2'),5'-bisphosphate nucleotidase activity [Evidence IEA]; GO:0004527 - exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
bifunctional oligoribonuclease/PAP phosphatase NrnA
COORDINATES: similar to AA sequence:RefSeq:WP_007975917.1
COORDINATES: protein motif:HMM:NF036897.2
COORDINATES: protein motif:HMM:NF027245.2
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008192867.1
COORDINATES: similar to AA sequence:RefSeq:WP_013880648.1
COORDINATES: similar to AA sequence:RefSeq:WP_006110572.1
COORDINATES: similar to AA sequence:RefSeq:WP_007975920.1
COORDINATES: similar to AA sequence:RefSeq:WP_008324011.1
COORDINATES: similar to AA sequence:RefSeq:WP_018227524.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016831.2
COORDINATES: protein motif:HMM:NF012706.2
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014053054.1
COORDINATES: similar to AA sequence:RefSeq:WP_014053053.1
COORDINATES: similar to AA sequence:RefSeq:WP_004976023.1
COORDINATES: similar to AA sequence:RefSeq:WP_014053051.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004053033.1
COORDINATES: protein motif:HMM:NF012364.2
COORDINATES: similar to AA sequence:RefSeq:WP_007142028.1
COORDINATES: similar to AA sequence:RefSeq:WP_015320378.1
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
nucleotidyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006056390.1
COORDINATES: similar to AA sequence:RefSeq:WP_006664283.1
GO:0008233 - peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014419.2
COORDINATES: similar to AA sequence:RefSeq:WP_017342073.1
COORDINATES: similar to AA sequence:RefSeq:WP_006183462.1
COORDINATES: protein motif:HMM:NF012371.2
COORDINATES: similar to AA sequence:RefSeq:WP_007741272.1
bacterio-opsin activator domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007976382.1
COORDINATES: similar to AA sequence:RefSeq:WP_007976380.1
COORDINATES: protein motif:HMM:NF024248.2
COORDINATES: similar to AA sequence:RefSeq:WP_005537329.1
GO:0046873 - metal ion transmembrane transporter activity [Evidence IEA]
GO:0030001 - metal ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007981519.1
COORDINATES: similar to AA sequence:RefSeq:WP_006107235.1
COORDINATES: similar to AA sequence:RefSeq:WP_007981501.1
COORDINATES: similar to AA sequence:RefSeq:WP_008523888.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF014893.2
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006886019.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
pyridoxal phosphate-dependent aminotransferase
COORDINATES: protein motif:HMM:NF012955.2
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01910.1
COORDINATES: protein motif:HMM:NF024771.2
COORDINATES: protein motif:HMM:TIGR03557.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
TIGR03557 family F420-dependent LLM class oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_007190557.1
COORDINATES: protein motif:HMM:NF024808.2
COORDINATES: protein motif:HMM:NF012738.2
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: protein motif:HMM:TIGR00260.1
GO:0004795 - threonine synthase activity [Evidence IEA]
GO:0009088 - threonine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012517.2
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
LLM class flavin-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF013567.2
COORDINATES: protein motif:HMM:NF014218.2
COORDINATES: protein motif:HMM:NF024853.2
COORDINATES: protein motif:HMM:NF005559.1
COORDINATES: protein motif:HMM:NF016777.2
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014081.2
COORDINATES: similar to AA sequence:RefSeq:WP_007739497.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020650.2
COORDINATES: protein motif:HMM:NF013224.2
Lrp/AsnC family transcriptional regulator
COORDINATES: protein motif:HMM:NF013053.2
COORDINATES: protein motif:HMM:NF012766.2
COORDINATES: protein motif:HMM:NF012398.2
COORDINATES: similar to AA sequence:RefSeq:WP_008421261.1
COORDINATES: similar to AA sequence:RefSeq:WP_004064647.1
COORDINATES: similar to AA sequence:RefSeq:WP_009376001.1
GO:0008381 - mechanosensitive monoatomic ion channel activity [Evidence IEA]
mechanosensitive ion channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005557488.1
COORDINATES: similar to AA sequence:RefSeq:WP_005555604.1
COORDINATES: similar to AA sequence:RefSeq:WP_007983572.1
COORDINATES: similar to AA sequence:RefSeq:WP_008385938.1
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007257362.1
COORDINATES: similar to AA sequence:RefSeq:WP_004043411.1
COORDINATES: similar to AA sequence:RefSeq:WP_011222449.1
COORDINATES: protein motif:HMM:NF024753.2
PQQ-binding-like beta-propeller repeat protein
COORDINATES: similar to AA sequence:RefSeq:WP_006429659.1
COORDINATES: protein motif:HMM:NF012936.2
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007976356.1
COORDINATES: similar to AA sequence:RefSeq:WP_007976354.1
COORDINATES: similar to AA sequence:RefSeq:WP_007980795.1
COORDINATES: protein motif:HMM:NF024212.2
COORDINATES: similar to AA sequence:RefSeq:WP_005555282.1
COORDINATES: similar to AA sequence:RefSeq:WP_007983581.1
COORDINATES: similar to AA sequence:RefSeq:WP_007142757.1
COORDINATES: similar to AA sequence:RefSeq:WP_007999278.1
COORDINATES: similar to AA sequence:RefSeq:WP_008159055.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0004521 - RNA endonuclease activity [Evidence IEA]
type II toxin-antitoxin system PemK/MazF family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_006882052.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013879741.1
COORDINATES: similar to AA sequence:RefSeq:WP_008422551.1
COORDINATES: similar to AA sequence:RefSeq:WP_008523587.1
COORDINATES: similar to AA sequence:RefSeq:WP_008527573.1
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006431618.1
COORDINATES: protein motif:HMM:NF024698.2
COORDINATES: similar to AA sequence:RefSeq:WP_008008488.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007981414.1
GO:0004181 - metallocarboxypeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007983438.1
COORDINATES: similar to AA sequence:RefSeq:WP_009367629.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004060470.1
COORDINATES: similar to AA sequence:RefSeq:WP_004060471.1
COORDINATES: similar to AA sequence:RefSeq:WP_004059479.1
COORDINATES: similar to AA sequence:RefSeq:WP_006054738.1
COORDINATES: similar to AA sequence:RefSeq:WP_005044458.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008896459.1
COORDINATES: similar to AA sequence:RefSeq:WP_007188501.1
GO:0032559 - adenyl ribonucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005533139.1
COORDINATES: similar to AA sequence:RefSeq:WP_008418313.1
COORDINATES: similar to AA sequence:RefSeq:WP_015299591.1
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007698273.1
COORDINATES: similar to AA sequence:RefSeq:WP_006184997.1
COORDINATES: protein motif:HMM:NF012791.2
COORDINATES: similar to AA sequence:RefSeq:WP_007976566.1
COORDINATES: similar to AA sequence:RefSeq:WP_010890466.1
COORDINATES: protein motif:HMM:TIGR01428.1
GO:0018784 - (S)-2-haloacid dehalogenase activity [Evidence IEA]
GO:0006805 - xenobiotic metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007982209.1
COORDINATES: similar to AA sequence:RefSeq:WP_008414929.1
COORDINATES: similar to AA sequence:RefSeq:WP_007540111.1
COORDINATES: similar to AA sequence:RefSeq:WP_012942228.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: similar to AA sequence:RefSeq:WP_008577347.1
COORDINATES: similar to AA sequence:RefSeq:WP_006077819.1
COORDINATES: similar to AA sequence:RefSeq:WP_006089367.1
COORDINATES: protein motif:HMM:NF021536.2
type IV secretory system conjugative DNA transfer family protein
COORDINATES: protein motif:HMM:TIGR01180.1
GO:0030246 - carbohydrate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF018877.2
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018559464.1
GO:0006486 - protein glycosylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF025668.2
fibronectin type III-like domain-contianing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007694896.1
COORDINATES: similar to AA sequence:RefSeq:WP_007698662.1
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: similar to AA sequence:RefSeq:WP_007109542.1
COORDINATES: similar to AA sequence:RefSeq:WP_008452221.1
COORDINATES: protein motif:HMM:NF015682.2
GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014041110.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005041521.1
COORDINATES: similar to AA sequence:RefSeq:WP_006106793.1
GO:0016857 - racemase and epimerase activity, acting on carbohydrates and derivatives [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005041529.1
GO:0008927 - mannonate dehydratase activity [Evidence IEA]
GO:0006064 - glucuronate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006106855.1
SMP-30/gluconolactonase/LRE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006106798.1
COORDINATES: similar to AA sequence:RefSeq:WP_006106797.1
COORDINATES: protein motif:HMM:NF024799.2
sugar ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004043159.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - DNA transposition [Evidence IEA]
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008385432.1
COORDINATES: similar to AA sequence:RefSeq:WP_013440732.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006088124.1
COORDINATES: similar to AA sequence:RefSeq:WP_008312715.1
COORDINATES: similar to AA sequence:RefSeq:WP_007692706.1
COORDINATES: similar to AA sequence:RefSeq:WP_004596974.1
COORDINATES: similar to AA sequence:RefSeq:WP_008417785.1
COORDINATES: similar to AA sequence:RefSeq:WP_012945138.1
GO:0008783 - agmatinase activity [Evidence IEA]
GO:0008295 - spermidine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017532.2
phytanoyl-CoA dioxygenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007978459.1
COORDINATES: protein motif:HMM:NF017760.2
COORDINATES: similar to AA sequence:RefSeq:WP_009733169.1
GO:0009166 - nucleotide catabolic process [Evidence IEA]
5'-nucleotidase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012514.2
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF025054.2
COORDINATES: similar to AA sequence:RefSeq:WP_004043364.1
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006974 - DNA damage response [Evidence IEA]; GO:0018142 - protein-DNA covalent cross-linking [Evidence IEA]
SOS response-associated peptidase family protein
serine hydrolase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008526738.1
COORDINATES: protein motif:HMM:NF024812.2
COORDINATES: similar to AA sequence:RefSeq:WP_007109818.1
COORDINATES: similar to AA sequence:RefSeq:WP_006168456.1
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007141529.1
COORDINATES: similar to AA sequence:RefSeq:WP_006091797.1
COORDINATES: similar to AA sequence:RefSeq:WP_006666019.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_004056155.1
COORDINATES: similar to AA sequence:RefSeq:WP_018837191.1
COORDINATES: similar to AA sequence:RefSeq:WP_005040320.1
COORDINATES: protein motif:HMM:NF019928.2
COORDINATES: similar to AA sequence:RefSeq:WP_007920689.1
COORDINATES: similar to AA sequence:RefSeq:WP_009365658.1
COORDINATES: protein motif:HMM:NF037722.2
COORDINATES: similar to AA sequence:RefSeq:WP_007979268.1
COORDINATES: similar to AA sequence:RefSeq:WP_009366945.1
COORDINATES: similar to AA sequence:RefSeq:WP_007259604.1
COORDINATES: similar to AA sequence:RefSeq:WP_007979101.1
COORDINATES: protein motif:HMM:NF015338.2
endonuclease/exonuclease/phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008368186.1
COORDINATES: similar to AA sequence:RefSeq:WP_006827320.1
COORDINATES: similar to AA sequence:RefSeq:WP_007982625.1
COORDINATES: protein motif:HMM:NF013561.2
COORDINATES: protein motif:HMM:NF015925.2
COORDINATES: protein motif:HMM:NF019912.2
COORDINATES: similar to AA sequence:RefSeq:WP_005556683.1
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012311.2
COORDINATES: protein motif:HMM:NF013866.2
prolyl oligopeptidase family serine peptidase
COORDINATES: similar to AA sequence:RefSeq:WP_007273566.1
COORDINATES: similar to AA sequence:RefSeq:WP_007979082.1
COORDINATES: similar to AA sequence:RefSeq:WP_007979081.1
COORDINATES: similar to AA sequence:RefSeq:WP_007979080.1
COORDINATES: similar to AA sequence:RefSeq:WP_005044894.1
GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007542856.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056174.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056175.1
COORDINATES: similar to AA sequence:RefSeq:WP_009377613.1
COORDINATES: similar to AA sequence:RefSeq:WP_014053540.1
COORDINATES: similar to AA sequence:RefSeq:WP_006180945.1
orc1/cdc6 family replication initiation protein
COORDINATES: protein motif:HMM:NF016300.2
The SIMPL domain is named for its presence in mouse protein SIMPL (signalling molecule that associates with mouse pelle-like kinase). Bacterial member BP26, from Brucella, was shown to assemble into a channel-like structure, while YggE from E. coli has been associated with resistance to oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015788324.1
COORDINATES: similar to AA sequence:RefSeq:WP_007143696.1
COORDINATES: similar to AA sequence:RefSeq:WP_008426337.1
COORDINATES: similar to AA sequence:RefSeq:WP_007737289.1
COORDINATES: similar to AA sequence:RefSeq:WP_008383874.1
winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007737285.1
GO:0046025 - precorrin-6Y C5,15-methyltransferase (decarboxylating) activity [Evidence IEA]
GO:0046140 - corrin biosynthetic process [Evidence IEA]
precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT
COORDINATES: similar to AA sequence:RefSeq:WP_005042227.1
cobalt-factor II C(20)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015762828.1
cobalt-precorrin-4/precorrin-4 C(11)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_008383869.1
COORDINATES: similar to AA sequence:RefSeq:WP_004594125.1
COORDINATES: similar to AA sequence:RefSeq:WP_004594124.1
GO:0030789 - precorrin-3B C17-methyltransferase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008383863.1
COORDINATES: similar to AA sequence:RefSeq:WP_008383862.1
COORDINATES: similar to AA sequence:RefSeq:WP_007108249.1
GO:0016829 - lyase activity [Evidence IEA]
CbiX/SirB N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004594120.1
COORDINATES: similar to AA sequence:RefSeq:WP_008383850.1
COORDINATES: similar to AA sequence:RefSeq:WP_008580753.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004972116.1
(2Fe-2S) ferredoxin domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015762818.1
COORDINATES: similar to AA sequence:RefSeq:WP_004972120.1
COORDINATES: similar to AA sequence:RefSeq:WP_008383837.1
COORDINATES: similar to AA sequence:RefSeq:WP_018259131.1
GO:0051116 - cobaltochelatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011571549.1
COORDINATES: similar to AA sequence:RefSeq:WP_015762813.1
cobalt-precorrin-7 (C(5))-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007737241.1
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: protein motif:HMM:NF004790.0
GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
uroporphyrinogen-III C-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_008418948.1
COORDINATES: similar to AA sequence:RefSeq:WP_018259127.1
COORDINATES: protein motif:HMM:TIGR04281.1
PGF-CTERM-anchored ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007983599.1
COORDINATES: protein motif:HMM:NF013752.2
COORDINATES: protein motif:HMM:NF017273.2
COORDINATES: similar to AA sequence:RefSeq:WP_015299178.1
GO:0016020 - membrane [Evidence IEA]; GO:1902495 - transmembrane transporter complex [Evidence IEA]
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007979373.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF027232.2
COORDINATES: similar to AA sequence:RefSeq:WP_009366579.1
COORDINATES: similar to AA sequence:RefSeq:WP_009486982.1
COORDINATES: protein motif:HMM:NF014244.2
COORDINATES: similar to AA sequence:RefSeq:WP_007141423.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014050601.1
COORDINATES: similar to AA sequence:RefSeq:WP_007258836.1
COORDINATES: similar to AA sequence:RefSeq:WP_004591086.1
COORDINATES: similar to AA sequence:RefSeq:WP_005041133.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004065861.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012355.2
GO:0005507 - copper ion binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
plastocyanin/azurin family copper-binding protein
COORDINATES: protein motif:HMM:NF016130.2
COORDINATES: similar to AA sequence:RefSeq:WP_006067201.1
COORDINATES: similar to AA sequence:RefSeq:WP_007736853.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007694787.1
COORDINATES: similar to AA sequence:RefSeq:WP_004966858.1
COORDINATES: similar to AA sequence:RefSeq:WP_008313916.1
COORDINATES: similar to AA sequence:RefSeq:WP_008313895.1
COORDINATES: similar to AA sequence:RefSeq:WP_007975914.1
COORDINATES: similar to AA sequence:RefSeq:WP_008390423.1
COORDINATES: similar to AA sequence:RefSeq:WP_015322037.1
COORDINATES: similar to AA sequence:RefSeq:WP_006056044.1
GO:0008124 - 4-alpha-hydroxytetrahydrobiopterin dehydratase activity [Evidence IEA]
GO:0006729 - tetrahydrobiopterin biosynthetic process [Evidence IEA]
4a-hydroxytetrahydrobiopterin dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_011571531.1
COORDINATES: similar to AA sequence:RefSeq:WP_005558526.1
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: similar to AA sequence:RefSeq:WP_007981358.1
COORDINATES: similar to AA sequence:RefSeq:WP_007142736.1
COORDINATES: similar to AA sequence:RefSeq:WP_008414734.1
GO:0004455 - ketol-acid reductoisomerase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]; GO:0009099 - valine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004975839.1
COORDINATES: similar to AA sequence:RefSeq:WP_015300315.1
COORDINATES: similar to AA sequence:RefSeq:WP_007259823.1
COORDINATES: similar to AA sequence:RefSeq:WP_007992786.1
COORDINATES: similar to AA sequence:RefSeq:WP_005040886.1
MraZ N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF025670.2
COORDINATES: similar to AA sequence:RefSeq:WP_006088502.1
COORDINATES: protein motif:HMM:NF012596.2
COORDINATES: similar to AA sequence:RefSeq:WP_006183368.1
RNA-guided endonuclease TnpB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006165229.1
COORDINATES: similar to AA sequence:RefSeq:WP_004063561.1
GO:0004540 - RNA nuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014585.2
hydantoinase B/oxoprolinase family protein
COORDINATES: protein motif:HMM:NF012296.2
GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
COORDINATES: protein motif:HMM:NF019498.2
COORDINATES: similar to AA sequence:RefSeq:WP_008163330.1
geranylgeranylglycerol-phosphate geranylgeranyltransferase
COORDINATES: protein motif:HMM:NF014080.2
COORDINATES: similar to AA sequence:RefSeq:WP_007992857.1
COORDINATES: similar to AA sequence:RefSeq:WP_009488198.1
COORDINATES: similar to AA sequence:RefSeq:WP_007975915.1
COORDINATES: protein motif:HMM:NF012774.2
COORDINATES: similar to AA sequence:RefSeq:WP_005559844.1
COORDINATES: protein motif:HMM:NF024850.2
amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004061057.1
COORDINATES: similar to AA sequence:RefSeq:WP_004976490.1
COORDINATES: protein motif:HMM:NF014071.2
hydantoinase/oxoprolinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014052254.1
COORDINATES: protein motif:HMM:NF014684.2
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_015911459.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_004267087.1
COORDINATES: protein motif:HMM:NF013672.2
COORDINATES: similar to AA sequence:RefSeq:WP_013875924.1
aspartate aminotransferase family protein
COORDINATES: protein motif:HMM:NF012286.2
saccharopine dehydrogenase NADP-binding domain-containing protein
COORDINATES: protein motif:HMM:NF027964.2
saccharopine dehydrogenase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014052715.1
COORDINATES: protein motif:HMM:NF013696.2
GO:0016813 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines [Evidence IEA]
hydantoinase/carbamoylase family amidase
COORDINATES: similar to AA sequence:RefSeq:WP_014052711.1
GO:0047420 - N-acyl-D-amino-acid deacylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014052709.1
COORDINATES: similar to AA sequence:RefSeq:WP_014052706.1
COORDINATES: similar to AA sequence:RefSeq:WP_014052705.1
COORDINATES: similar to AA sequence:RefSeq:WP_014052704.1
COORDINATES: similar to AA sequence:RefSeq:WP_014052703.1
COORDINATES: protein motif:HMM:NF019581.2
COORDINATES: similar to AA sequence:RefSeq:WP_009375669.1
COORDINATES: similar to AA sequence:RefSeq:WP_007273319.1
COORDINATES: protein motif:HMM:NF019614.2
COORDINATES: similar to AA sequence:RefSeq:WP_006650887.1
COORDINATES: similar to AA sequence:RefSeq:WP_007975929.1
COORDINATES: similar to AA sequence:RefSeq:WP_007975931.1
COORDINATES: similar to AA sequence:RefSeq:WP_007975933.1
COORDINATES: similar to AA sequence:RefSeq:WP_014030602.1
COORDINATES: protein motif:HMM:TIGR04474.1
COORDINATES: similar to AA sequence:RefSeq:WP_008895336.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006667603.1
COORDINATES: similar to AA sequence:RefSeq:WP_018621516.1
COORDINATES: protein motif:HMM:NF018180.2
epoxide hydrolase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010695610.1
COORDINATES: similar to AA sequence:RefSeq:WP_007979292.1
COORDINATES: similar to AA sequence:RefSeq:WP_008850089.1
COORDINATES: similar to AA sequence:RefSeq:WP_006077971.1
COORDINATES: similar to AA sequence:RefSeq:WP_008414001.1
COORDINATES: similar to AA sequence:RefSeq:WP_013881769.1
COORDINATES: similar to AA sequence:RefSeq:WP_015910618.1
COORDINATES: similar to AA sequence:RefSeq:WP_008414728.1
glycoside hydrolase family 97 catalytic domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012660026.1